Glires	ANCESTRAL SPECIES	5	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00980000198488.m.b.b.b ##29	ENSGT00940000165871	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a #25	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672	ENSGT00940000156465	ENSGT00940000163236.a	ENSGT01090000260024.A.a.a.b.b.a #30	ENSGT01050000244828.c.b.b.a.a.a	ENSGT01050000244828.c.b.b.a.a.b	ENSGT01100000263548.a.a.a #31	ENSGT01100000263548.b.a.a.b.c.b ##31	ENSGT01100000263548.b.a.a.b.c.a ##31	ENSGT01050000244815.A.c.a.a.a ##28
Rodentia	ANCESTRAL SPECIES	6	ENSGT00980000198488.m.a.b.a.a.a ##29	ENSGT00980000198488.m.a.a.a.b ##29	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a #25	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672	ENSGT00940000156465	ENSGT00940000163236.a	ENSGT01090000260024.A.a.a.b.b.a #30	ENSGT01050000244828.c.b.b.a.a.a	ENSGT01050000244828.c.b.b.a.a.b	ENSGT01100000263548.a.a.a #31	ENSGT01100000263548.b.a.a.b.c.b ##31	ENSGT01100000263548.b.a.a.b.c.a ##31	ENSGT01050000244815.A.c.a.a.a ##28
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00980000198488.m.b.b.b ##29	ENSGT00980000198488.n ##29	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a #25	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672	ENSGT00940000156465	ENSGT00940000163236.a	ENSGT01090000260024.A.a.a.b.b.a #30	ENSGT01050000244828.c.b.b.a.a.a	ENSGT01050000244828.c.b.b.a.a.b	ENSGT01100000263548.a.a.a #31	ENSGT01100000263548.b.a.a.b.c.b ##31	ENSGT01050000244815.A.c.a.a.a ##28	ENSGT01100000263548.b.a.a.b.d ##31
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00980000198488.m.a.b.a.b.b ##29	ENSGT00980000198488.m.a.b.a.a.a ##29	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a #25	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672	ENSGT00940000156465	ENSGT00940000163236.a	ENSGT01090000260024.A.a.a.b.b.a #30	ENSGT01050000244828.c.b.b.a.a.a	ENSGT01050000244828.c.b.b.a.a.b	ENSGT01100000263548.a.a.a #31	ENSGT01100000263548.b.a.a.b.c.b ##31	ENSGT01050000244815.A.c.a.a.a ##28	ENSGT01100000263548.b.a.a.b.d ##31
Muroidea	ANCESTRAL SPECIES	15	ENSGT00980000198488.m.a.b.a.a.a ##29	ENSGT00980000198488.n ##29	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a.a.b #23	ENSGT01100000263548.b.a.a.a.b.a.a.a ##31	ENSGT01100000263548.b.a.a.a.b.a.b.a.b #24	ENSGT01100000263548.b.a.a.a.b.a.b.a.a #25	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672	ENSGT00940000156465.c	ENSGT00940000156465.d	ENSGT00940000163236.a	ENSGT01090000260024.A.a.a.b.b.a #30	ENSGT01050000244828.c.b.b.a.a.a	ENSGT01050000244828.c.b.b.a.a.b
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00980000198488.n ##29	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b ##29	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a.a.b #23	ENSGT01100000263548.b.a.a.a.b.a.b.b ##31	ENSGT01100000263548.b.a.a.a.b.a.b.a.b #24	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672	ENSGT00940000156465.c	ENSGT00940000156465.d.b	ENSGT00940000156465.d.a	ENSGT00940000163236.a	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.b #29	ENSGT01090000260024.A.a.a.b.b.a #30	ENSGT01050000244828.c.b.b.a.a.a
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.c.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.c.b ##29	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.b #20	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a.a.b #23	ENSGT01100000263548.b.a.a.a.b.a.b.b ##31	ENSGT01100000263548.b.a.a.a.b.a.b.a.b #24	ENSGT01100000263548.b.a.a.a.b.a.b.a.a #25	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00940000156465.d.a	ENSGT00940000156465.d.b	ENSGT00940000156465.c	ENSGT00870000136672	ENSGT00940000163236.a	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.b #29	ENSGT01090000260024.A.a.a.b.b.a #30
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00980000198488.m.a.b.a.b.a.a.b ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.c.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.c.b ##29	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.b #20	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a.a.b #23	ENSGT01100000263548.b.a.a.a.b.a.b.b ##31	ENSGT01100000263548.b.a.a.a.b.a.b.a.b #24	ENSGT01100000263548.b.a.a.a.b.a.b.a.a #25	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00940000156465.d.a	ENSGT00940000156465.d.b	ENSGT00940000156465.c	ENSGT00870000136672	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.b ##29	ENSGT00940000163236.a	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.b #29
Prairie vole	MODERN SPECIES	352	H2-Ob (ENSMOCG00000008562) #7	H2-Ab1 (ENSMOCG00000008439) #8	ENSMOCG00000013355 #9	ENSMOCG00000017941 #10	ENSMOCG00000019721 #11	H2-Ea (ENSMOCG00000008786) #12	Btnl2 (ENSMOCG00000014437) #13	Btnl1 (ENSMOCG00000018715) #14	ENSMOCG00000011431 #15	Rnf39 (ENSMOCG00000015333) #16	Ppp1r11 (ENSMOCG00000002207) #17	Polr1h (ENSMOCG00000008537) #18	Polr1has (ENSMOCG00000015745) #19	H2-M5 (ENSMOCG00000004410) #20	Mog (ENSMOCG00000019437) #21	Gabbr1 (ENSMOCG00000003335) #22	Or2h2 (ENSMOCG00000011908) #23	Or2h1b (ENSMOCG00000012727) #24	ENSMOCG00000002199 #25	Ubd (ENSMOCG00000017880) #26	Or2i1 (ENSMOCG00000020992) #27	Or10c1 (ENSMOCG00000005679) #28	H2-M2 (ENSMOCG00000021881) #29	ENSMOCG00000000543 #30	Or2b4 (ENSMOCG00000005857) #31
Northern American deer mouse	MODERN SPECIES	13	ENSPEMG00000025918 ##29	ENSPEMG00000028110 ##29	Trim26 (ENSPEMG00000009213)	Trim15 (ENSPEMG00000023524)	Trim10 (ENSPEMG00000028650)	Trim40 (ENSPEMG00000015417)	Trim31 (ENSPEMG00000017383)	Rnf39 (ENSPEMG00000023635) #16	Ppp1r11 (ENSPEMG00000025398) #17	Polr1h (ENSPEMG00000002416) #18	ENSPEMG00000022625 #19	ENSPEMG00000028188 ##29	ENSPEMG00000000605 ##29	H2-M5 (ENSPEMG00000023578) #20	Mog (ENSPEMG00000023066) #21	Gabbr1 (ENSPEMG00000016774) #22	Or2h2 (ENSPEMG00000011419) #23	Or2h1 (ENSPEMG00000029879) ##31	Or2h1b (ENSPEMG00000025131) #24	ENSPEMG00000026498	ENSPEMG00000029466 #25	Ubd (ENSPEMG00000004387) #26	Or2i1 (ENSPEMG00000027748) #27	Or10c1 (ENSPEMG00000002019) #28	Or11a4 (ENSPEMG00000029681)	Or12d13 (ENSPEMG00000025859)	ENSPEMG00000027382	ENSPEMG00000026651	ENSPEMG00000016980	H2-M3 (ENSPEMG00000025240) ##29	Or12d17 (ENSPEMG00000003887)
Cricetinae	ANCESTRAL SPECIES	53	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.d ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.c.b ##29	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.b #20	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a.a.b #23	ENSGT01100000263548.b.a.a.a.b.a.b.b ##31	ENSGT01100000263548.b.a.a.a.b.a.b.a.b #24	ENSGT01100000263548.b.a.a.a.b.a.b.a.a #25	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00940000156465.d.a	ENSGT00940000156465.d.b	ENSGT00940000156465.c	ENSGT00870000136672	ENSGT00940000163236.a	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.b #29	ENSGT01090000260024.A.a.a.b.b.a #30
Chinese hamster chok1gshd	MODERN SPECIES	54	ENSCGRG00001017369 ##29	ENSCGRG00001015503 ##29	ENSCGRG00001019233 ##29	Trim26 (ENSCGRG00001004414)	Trim15 (ENSCGRG00001013258)	Trim10 (ENSCGRG00001018317)	Trim40 (ENSCGRG00001020928)	Trim31 (ENSCGRG00001006008)	Rnf39 (ENSCGRG00001021833) #16	Ppp1r11 (ENSCGRG00001016497) #17	Polr1h (ENSCGRG00001016003) #18	Polr1has (ENSCGRG00001013477) #19	ENSCGRG00001014457 ##29	H2-M5 (ENSCGRG00001000094) #20	Mog (ENSCGRG00001017417) #21	Gabbr1 (ENSCGRG00001020413) #22	Or2h2 (ENSCGRG00001008432) #23	Or2h1 (ENSCGRG00001009442) ##31	Or2h1b (ENSCGRG00001009964) #24	ENSCGRG00001009359 #25	Ubd (ENSCGRG00001000884) #26	Or2i1 (ENSCGRG00001019942) #27	Or10c1 (ENSCGRG00001011439) #28	Or11a4 (ENSCGRG00001012269)	Or12d13 (ENSCGRG00001002283)	ENSCGRG00001003501	ENSCGRG00001013793	ENSCGRG00001008265	Or12d17 (ENSCGRG00001007577)	H2-M2 (ENSCGRG00001009530) #29	ENSCGRG00001009108 #30
Golden Hamster	MODERN SPECIES	873	Rpp21 (ENSMAUG00000018282)	Trim39 (ENSMAUG00000004795)	ENSMAUG00000018352 ##29	ENSMAUG00000000050 ##29	Trim26 (ENSMAUG00000018598)	Trim15 (ENSMAUG00000000054)	Trim10 (ENSMAUG00000001938)	ENSMAUG00000011593	Trim31 (ENSMAUG00000008163)	Rnf39 (ENSMAUG00000012824) #16	Ppp1r11 (ENSMAUG00000015085) #17	Polr1h (ENSMAUG00000000386) #18	Polr1has (ENSMAUG00000004062) #19	ENSMAUG00000006930 ##29	Mog (ENSMAUG00000011276) #21	Gabbr1 (ENSMAUG00000012954) #22	ENSMAUG00000015077 ##31	Ubd (ENSMAUG00000016110) #26	Or2i1 (ENSMAUG00000016266) #27	Or10c1 (ENSMAUG00000016183) #28	H2-M2 (ENSMAUG00000003870) #29	ENSMAUG00000016268 #30
Murinae	ANCESTRAL SPECIES	18	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.b ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.a ##29	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a.a.b #23	ENSGT01100000263548.b.a.a.a.b.a.b.b ##31	ENSGT01100000263548.b.a.a.a.b.a.b.a.b #24	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672.e.a.a	ENSGT00940000156465.d.b	ENSGT00870000136672.f	ENSGT00940000156465.c	ENSGT00870000136672.e.a.b	ENSGT00940000156465.d.a	ENSGT00940000163236.a	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.b #29
Mus	ANCESTRAL SPECIES	16	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.a.c ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a.c ##29	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.b #20	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a.a.b #23	ENSGT01100000263548.b.a.a.a.b.a.b.b ##31	ENSGT01100000263548.b.a.a.a.b.a.b.a.b #24	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672.e.a.a	ENSGT00940000156465.d.b	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.b ##29	ENSGT00870000136672.e.a.b	ENSGT00940000156465.d.a	ENSGT00940000163236.a	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.b #29	ENSGT01090000260024.A.a.a.b.b.a #30
Mus_A	ANCESTRAL SPECIES	10	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.b ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.a.d ##29	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.b #20	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a.a.b #23	ENSGT01100000263548.b.a.a.a.b.a.a.a ##31	ENSGT01100000263548.b.a.a.a.b.a.b.b ##31	ENSGT01100000263548.b.a.a.a.b.a.b.a.b #24	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672.e.a.a.b	ENSGT00870000136672.e.a.a.a	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.b ##29	ENSGT00870000136672.e.a.b	ENSGT00940000156465.d.b	ENSGT00940000156465.d.a	ENSGT00940000163236.a
Mus_B	ANCESTRAL SPECIES	9	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.a.c.b.a ##29	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.b ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.b #20	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a.a.b #23	ENSGT01100000263548.b.a.a.a.b.a.a.a ##31	ENSGT01100000263548.b.a.a.a.b.a.b.b ##31	ENSGT01100000263548.b.a.a.a.b.a.b.a.b #24	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672.e.a.a.b	ENSGT00870000136672.e.a.a.a	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.b ##29	ENSGT00870000136672.e.a.b	ENSGT00940000156465.d.b.c.b	ENSGT00940000156465.d.b.c.a	ENSGT00940000156465.d.a
Mouse	MODERN SPECIES	8	H2-M10.5 (ENSMUSG00000037246) ##29	H2-M10.6 (ENSMUSG00000037130) ##29	Trim26 (ENSMUSG00000024457)	Trim15 (ENSMUSG00000050747)	Trim10 (ENSMUSG00000073400)	Trim40 (ENSMUSG00000073399)	Trim31 (ENSMUSG00000058063)	Rnf39 (ENSMUSG00000036492) #16	Ppp1r11 (ENSMUSG00000036398) #17	Polr1h (ENSMUSG00000036315) #18	Polr1has (ENSMUSG00000036214) #19	2410137M14Rik (ENSMUSG00000064308) ##29	H2-M5 (ENSMUSG00000024459) #20	Zfp57 (ENSMUSG00000036036)	Mog (ENSMUSG00000076439) #21	Gabbr1 (ENSMUSG00000024462) #22	Or2h2 (ENSMUSG00000056600) #23	Or2h1 (ENSMUSG00000095377) ##31	Or2h2c (ENSMUSG00000096477) #25	Or2h1b (ENSMUSG00000091601) #24	Or2h2b-ps1 (ENSMUSG00000090556) #25	Ubd (ENSMUSG00000035186) #26	Or2i1 (ENSMUSG00000043827) #27	Or10c1 (ENSMUSG00000049561) #28	Or11a4 (ENSMUSG00000064121)	Or1o2 (ENSMUSG00000058802)	Or1o3 (ENSMUSG00000063660)	H2-M3 (ENSMUSG00000016206) ##29	Or1o4 (ENSMUSG00000061972)	Or12d12 (ENSMUSG00000092077)	Or12d2 (ENSMUSG00000091531)
Mus_C	ANCESTRAL SPECIES	9	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.a.a.b.a.d ##29	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.b ##29	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.b #20	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a.a.b #23	ENSGT01100000263548.b.a.a.a.b.a.a.a ##31	ENSGT01100000263548.b.a.a.a.b.a.b.b ##31	ENSGT01100000263548.b.a.a.a.b.a.b.a.b #24	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672.e.a.a.b	ENSGT00870000136672.e.a.a.a	ENSGT00980000198488.m.a.b.a.b.a.b.b.a.a.b ##29	ENSGT00870000136672.e.a.b	ENSGT00940000156465.d.a	ENSGT00940000156465.c.c.b	ENSGT00940000156465.c.d
spretus	MODERN SPECIES	8	MGP_SPRETEiJ_G0022463 ##29	MGP_SPRETEiJ_G0022464 ##29	Trim26 (MGP_SPRETEiJ_G0022465)	Trim15 (MGP_SPRETEiJ_G0022466)	Trim10 (MGP_SPRETEiJ_G0022467)	Trim40 (MGP_SPRETEiJ_G0022468)	Trim31 (MGP_SPRETEiJ_G0022469)	Rnf39 (MGP_SPRETEiJ_G0022470) #16	MGP_SPRETEiJ_G0022471 #17	Polr1h (MGP_SPRETEiJ_G0022472) #18	MGP_SPRETEiJ_G0022473 #19	2410137M14Rik (MGP_SPRETEiJ_G0022474) ##29	H2-M5 (MGP_SPRETEiJ_G0022475) #20	Zfp57 (MGP_SPRETEiJ_G0022476)	Mog (MGP_SPRETEiJ_G0022477) #21	Gabbr1 (MGP_SPRETEiJ_G0022478) #22	Or2h2 (MGP_SPRETEiJ_G0022479) #23	MGP_SPRETEiJ_G0022480 ##31	Or2h1 (MGP_SPRETEiJ_G0022481) ##31	MGP_SPRETEiJ_G0022482 #24	Ubd (MGP_SPRETEiJ_G0022483) #26	Or2i1 (MGP_SPRETEiJ_G0022484) #27	Or10c1 (MGP_SPRETEiJ_G0022485) #28	Or11a4 (MGP_SPRETEiJ_G0022486)	H2-M3 (MGP_SPRETEiJ_G0022487) ##29	MGP_SPRETEiJ_G0022488	MGP_SPRETEiJ_G0022489	MGP_SPRETEiJ_G0022490	MGP_SPRETEiJ_G0022491	MGP_SPRETEiJ_G0022492	Or12d17 (MGP_SPRETEiJ_G0022493)
Steppe mouse	MODERN SPECIES	2571	H2-M10.6 (ENSMSIG00000017431) ##29	Trim26 (ENSMSIG00000017185)	Trim15 (ENSMSIG00000017136)	Trim10 (ENSMSIG00000017115)	Trim40 (ENSMSIG00000017088)	Trim31 (ENSMSIG00000017054)	Rnf39 (ENSMSIG00000017038) #16	Ppp1r11 (ENSMSIG00000017013) #17	Polr1h (ENSMSIG00000016989) #18	Polr1has (ENSMSIG00000016962) #19	2410137M14Rik (ENSMSIG00000016936) ##29	ENSMSIG00000015474 ##29	H2-M5 (ENSMSIG00000015441) #20	Zfp57 (ENSMSIG00000015413)	Mog (ENSMSIG00000015347) #21	Gabbr1 (ENSMSIG00000015270) #22	Or2h2 (ENSMSIG00000015263) #23
Ryukyu mouse	MODERN SPECIES	8	H2-M10.4 (MGP_CAROLIEiJ_G0021551) ##29	H2-M11 (MGP_CAROLIEiJ_G0021552) ##29	Trim26 (MGP_CAROLIEiJ_G0021553)	Trim15 (MGP_CAROLIEiJ_G0021554)	Trim10 (MGP_CAROLIEiJ_G0021555)	Trim40 (MGP_CAROLIEiJ_G0021556)	Trim31 (MGP_CAROLIEiJ_G0021557)	Rnf39 (MGP_CAROLIEiJ_G0021558) #16	Ppp1r11 (MGP_CAROLIEiJ_G0021559) #17	Polr1h (MGP_CAROLIEiJ_G0021560) #18	MGP_CAROLIEiJ_G0021561 #19	MGP_CAROLIEiJ_G0021562	H2-M5 (MGP_CAROLIEiJ_G0021563) #20	Zfp57 (MGP_CAROLIEiJ_G0021564)	Mog (MGP_CAROLIEiJ_G0021565) #21	Gabbr1 (MGP_CAROLIEiJ_G0021566) #22	Or2h2 (MGP_CAROLIEiJ_G0021567) #23	MGP_CAROLIEiJ_G0021568 ##31	Or2h1 (MGP_CAROLIEiJ_G0021569) ##31	MGP_CAROLIEiJ_G0021570 #24	Ubd (MGP_CAROLIEiJ_G0021571) #26	Or2i1 (MGP_CAROLIEiJ_G0021572) #27	Or10c1 (MGP_CAROLIEiJ_G0021573) #28	Or11a4 (MGP_CAROLIEiJ_G0021574)	MGP_CAROLIEiJ_G0021575	MGP_CAROLIEiJ_G0021576	H2-M3 (MGP_CAROLIEiJ_G0021577) ##29	MGP_CAROLIEiJ_G0021578	MGP_CAROLIEiJ_G0021579	MGP_CAROLIEiJ_G0021580	MGP_CAROLIEiJ_G0021581
Shrew mouse	MODERN SPECIES	9	H2-M11 (MGP_PahariEiJ_G0020549) ##29	H2-M1 (MGP_PahariEiJ_G0020550) ##29	Trim26 (MGP_PahariEiJ_G0020551)	Trim15 (MGP_PahariEiJ_G0020552)	Trim10 (MGP_PahariEiJ_G0020553)	Trim40 (MGP_PahariEiJ_G0020554)	Trim31 (MGP_PahariEiJ_G0020555)	Rnf39 (MGP_PahariEiJ_G0020556) #16	Ppp1r11 (MGP_PahariEiJ_G0020557) #17	Polr1h (MGP_PahariEiJ_G0020558) #18	MGP_PahariEiJ_G0020559 #19	MGP_PahariEiJ_G0020560	H2-M5 (MGP_PahariEiJ_G0020561) #20	Zfp57 (MGP_PahariEiJ_G0020562)	Mog (MGP_PahariEiJ_G0020563) #21	Gabbr1 (MGP_PahariEiJ_G0020564) #22	Or2h2 (MGP_PahariEiJ_G0020565) #23	MGP_PahariEiJ_G0020566 ##31	MGP_PahariEiJ_G0020567 ##31	MGP_PahariEiJ_G0020568 #24	Ubd (MGP_PahariEiJ_G0020569) #26	MGP_PahariEiJ_G0020570	Or10c1 (MGP_PahariEiJ_G0020571) #28	Or11a4 (MGP_PahariEiJ_G0020572)	MGP_PahariEiJ_G0020573	MGP_PahariEiJ_G0020574	MGP_PahariEiJ_G0020575	Or1o1 (MGP_PahariEiJ_G0020576)	Or1o11 (MGP_PahariEiJ_G0020577)	Or12d17 (MGP_PahariEiJ_G0020578)	MGP_PahariEiJ_G0020579
Rat	MODERN SPECIES	12	Trim26 (ENSRNOG00000032930)	Trim15 (ENSRNOG00000031689)	Trim10 (ENSRNOG00000000782)	Trim40 (ENSRNOG00000000783)	Trim31 (ENSRNOG00000021518)	ENSRNOG00000067285	Rnf39 (ENSRNOG00000000781) #16	Ppp1r11 (ENSRNOG00000000780)	Polr1h (ENSRNOG00000000779) #18	ENSRNOG00000064048	Znrd1as1 (ENSRNOG00000000778) #19	RT1-M6-2 (ENSRNOG00000040052) ##29	RT1-M5 (ENSRNOG00000033136) #20	Zfp57 (ENSRNOG00000022730)	Mog (ENSRNOG00000000775) #21	Gabbr1 (ENSRNOG00000000774) #22	Or2h2 (ENSRNOG00000043481) #23	Or2h1 (ENSRNOG00000065272) ##31	Or2h1b (ENSRNOG00000067843) #24	AABR07044301.1 (ENSRNOG00000045658)	Or2h2c (ENSRNOG00000062729) #25	Ubd (ENSRNOG00000000768)	AC112568.1 (ENSRNOG00000000767) #26	ENSRNOG00000065111 #27	Or10c1 (ENSRNOG00000029420) #28	Or11a4 (ENSRNOG00000000765)	Or1o2 (ENSRNOG00000070009)	Or1o2d-ps1 (ENSRNOG00000065421)	Or1o2e (ENSRNOG00000052839)	Or12d14c (ENSRNOG00000029883)	Or12d2c (ENSRNOG00000066268)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1528															Mog (ENSNGAG00000022436) #21	Gabbr1 (ENSNGAG00000023752) #22	ENSNGAG00000011854 ##31	Or2h1b (ENSNGAG00000010566) #24	Ubd (ENSNGAG00000024379) #26	ENSNGAG00000022255 ##29
Lesser Egyptian jerboa	MODERN SPECIES	220	Dhx16 (ENSJJAG00000000186)	ENSJJAG00000000398	Atat1 (ENSJJAG00000000728)	Mrps18b (ENSJJAG00000003794)	Ppp1r10 (ENSJJAG00000006676)	ENSJJAG00000010508	Prr3 (ENSJJAG00000010607)	Gnl1 (ENSJJAG00000010831)	Rpp21 (ENSJJAG00000011176)	Trim39 (ENSJJAG00000020240)	Trim26 (ENSJJAG00000020786)	Trim10 (ENSJJAG00000000052)	ENSJJAG00000000537	Rnf39 (ENSJJAG00000001427) #16	Mog (ENSJJAG00000002510) #21	Gabbr1 (ENSJJAG00000010670) #22	ENSJJAG00000013540	Or14j1 (ENSJJAG00000012525)	Neu1 (ENSJJAG00000015681)	Slc44a4 (ENSJJAG00000017469)	Ehmt2 (ENSJJAG00000011038)	Cfb (ENSJJAG00000020383)	Nelfe (ENSJJAG00000014005)	ENSJJAG00000015952	Dxo (ENSJJAG00000016118)	Stk19 (ENSJJAG00000016628)	C4b (ENSJJAG00000019955)	Tnxb (ENSJJAG00000011509)	Atf6b (ENSJJAG00000013700)	Prrt1 (ENSJJAG00000018708)	Ppt2 (ENSJJAG00000018803)
Kangaroo rat	MODERN SPECIES	457	Prr3 (ENSDORG00000027875)	ENSDORG00000015458 ##29	ENSDORG00000027945	Rpp21 (ENSDORG00000000655)	Trim39 (ENSDORG00000000653)	Trim26 (ENSDORG00000014023)	Trim15 (ENSDORG00000014021)	Trim10 (ENSDORG00000014020)	Trim40 (ENSDORG00000014019)	Trim31 (ENSDORG00000014016)	Rnf39 (ENSDORG00000012101) #16	Ppp1r11 (ENSDORG00000029191) #17	Polr1h (ENSDORG00000004338) #18	Polr1has (ENSDORG00000004337) #19	Mog (ENSDORG00000003556) #21	Gabbr1 (ENSDORG00000004559) #22	ENSDORG00000028203 #27	Or10c1 (ENSDORG00000025973) #28	Or11a4 (ENSDORG00000009035)	ENSDORG00000009036	ENSDORG00000013846	ENSDORG00000009849 #30	Or14j1 (ENSDORG00000005943)	ENSDORG00000025788 ##27	ENSDORG00000027807 ##27	ENSDORG00000029312 ##27	ENSDORG00000024536 ##27	ENSDORG00000025408	ENSDORG00000029336 ##27	ENSDORG00000023272 ##27	ENSDORG00000028763 ##27
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00980000198488.m.a.a.a.b ##29	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00940000165871	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a #25	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672	ENSGT00940000156465	ENSGT00940000163236.a	ENSGT00940000163236.b	ENSGT01090000260024.A.a.a.b.b.a #30	ENSGT01050000244828.c.b.b.a.a.a	ENSGT01050000244828.c.b.b.a.a.b	ENSGT01100000263548.a.a.a #31	ENSGT01100000263548.b.a.a.b.c.b ##31	ENSGT01100000263548.b.a.a.b.c.a ##31
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000161804	ENSGT00940000158047	ENSGT00980000198488.m.a.a.a.b ##29	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a #25	ENSGT00910000144359 #26
Hystricomorpha_a	ANCESTRAL SPECIES	42	ENSGT00940000161804	ENSGT00940000158047	ENSGT00980000198488.m.b.b.b.h ##29	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a #25	ENSGT00910000144359 #26
Hystricomorpha_b	ANCESTRAL SPECIES	3	ENSGT00940000158329	ENSGT00940000161804	ENSGT00940000158047	ENSGT00980000198488.m.a.b.a.b.b ##29	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a #25	ENSGT00910000144359 #26
Long-tailed chinchilla	MODERN SPECIES	290	PPP1R10 (ENSCLAG00000002371)	ABCF1 (ENSCLAG00000003440)	PRR3 (ENSCLAG00000003296)	GNL1 (ENSCLAG00000012557)	ENSCLAG00000017247 ##29	ENSCLAG00000011335 ##29	RPP21 (ENSCLAG00000010598)	TRIM39 (ENSCLAG00000003141)	TRIM26 (ENSCLAG00000002373)	ENSCLAG00000002056	TRIM10 (ENSCLAG00000004129)	TRIM40 (ENSCLAG00000003556)	PPP1R11 (ENSCLAG00000003948) #17	POLR1H (ENSCLAG00000003830) #18	MOG (ENSCLAG00000003415) #21	GABBR1 (ENSCLAG00000006316) #22	OR2H1 (ENSCLAG00000017675) #25	UBD (ENSCLAG00000004855) #26
Degu	MODERN SPECIES	432				ENSODEG00000000499 ##29	ENSODEG00000000487	ENSODEG00000000477	TRIM26 (ENSODEG00000000421)	ENSODEG00000000385	TRIM10 (ENSODEG00000000362)	TRIM40 (ENSODEG00000000338)	RNF39 (ENSODEG00000000323) #16	ENSODEG00000000307 #17	POLR1H (ENSODEG00000000276) #18	ENSODEG00000002031 #19	MOG (ENSODEG00000001982) #21	GABBR1 (ENSODEG00000001827) #22
Guinea pig	MODERN SPECIES	222						ENSCPOG00000002330 ##29	RPP21 (ENSCPOG00000006048)	TRIM39 (ENSCPOG00000039766)	ENSCPOG00000007659 ##29	TRIM26 (ENSCPOG00000031467)	TRIM10 (ENSCPOG00000000013)	PPP1R11 (ENSCPOG00000038043) #17	POLR1H (ENSCPOG00000002318) #18	ENSCPOG00000005900	MOG (ENSCPOG00000024872) #21	GABBR1 (ENSCPOG00000012930) #22	OR2I1P (ENSCPOG00000019686) #27
Naked mole-rat female	MODERN SPECIES	30	PPP1R10 (ENSHGLG00000019477)	ABCF1 (ENSHGLG00000019209)	ENSHGLG00000042777 #29	ENSHGLG00000017179	GNL1 (ENSHGLG00000017193)	ENSHGLG00000049352 ##29	RPP21 (ENSHGLG00000045079)	TRIM39 (ENSHGLG00000017217)	TRIM26 (ENSHGLG00000036187)	TRIM10 (ENSHGLG00000019234)	RNF39 (ENSHGLG00000019552) #16	ENSHGLG00000019201 #17	ENSHGLG00000019393 #18	ZFP57 (ENSHGLG00000043997)	MOG (ENSHGLG00000019380) #21	GABBR1 (ENSHGLG00000019391) #22	OR2H2 (ENSHGLG00000019297) #25	ENSHGLG00000005164	ENSHGLG00000008802	ENSHGLG00000007795	UCN3 (ENSHGLG00000007149)	ENSHGLG00000006095	ENSHGLG00000039718	ENSHGLG00000018864	ENSHGLG00000018579	SDHA (ENSHGLG00000012160)	PDCD6 (ENSHGLG00000004728)	AHRR (ENSHGLG00000004877)	EXOC3 (ENSHGLG00000006821)	SLC9A3 (ENSHGLG00000008808)	TPPP (ENSHGLG00000046346)
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00980000198488.m.a.b.a.a.a ##29	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00940000165871	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a.d #25	ENSGT01100000263548.b.a.a.a.b.a.c.b #25	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672	ENSGT00940000156465	ENSGT00940000163236.a	ENSGT00940000163236.b	ENSGT01090000260024.A.a.a.b.b.a #30	ENSGT01050000244828.c.b.b.a.a.a	ENSGT01050000244828.c.b.b.a.a.b	ENSGT01100000263548.a.a.a.j #31	ENSGT01100000263548.b.a.a.b.c.b ##31
Marmotini	ANCESTRAL SPECIES	96		ENSGT00980000198488.m.b.b.b ##29	ENSGT00980000198488.m.a.b.a.a.b.b.b.b ##29	ENSGT00940000165871	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a.d #25	ENSGT01100000263548.b.a.a.a.b.a.c.b #25	ENSGT00910000144359 #26	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT00940000166604	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392.a	ENSGT00870000136672	ENSGT00940000156465.f	ENSGT00980000198488.m.a.a.a.a.m.b.a.b ##29	ENSGT00940000154431.f.m.a.b
Marmotini_b	ANCESTRAL SPECIES	168	ENSGT00980000198488.m.a.b.a.a.b.a.a.a.a ##29	ENSGT00980000198488.m.b.b.b ##29	ENSGT00980000198488.m.a.b.a.a.b.b.b.b ##29	ENSGT00940000165871	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a.d #25	ENSGT01100000263548.b.a.a.a.b.a.c.b #25	ENSGT00910000144359 #26	ENSGT01090000260044.A.b.a.b	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.a.a.a #27	ENSGT00940000166604	ENSGT00870000136672	ENSGT00940000156465.f	ENSGT00980000198488.m.a.a.a.a.m.b.a.b ##29	ENSGT00940000154431.f.m.a.b
Arctic ground squirrel	MODERN SPECIES	661	ENSUPAG00010015541 ##29	ENSUPAG00010015481 ##29	ENSUPAG00010015396	TRIM26 (ENSUPAG00010015358)	TRIM15 (ENSUPAG00010015352)	TRIM10 (ENSUPAG00010015331)	TRIM40 (ENSUPAG00010015323)	ENSUPAG00010015289	RNF39 (ENSUPAG00010015281) #16	PPP1R11 (ENSUPAG00010015270) #17	POLR1H (ENSUPAG00010015245) #18	ENSUPAG00010015233 #19	ENSUPAG00010015224	ENSUPAG00010015219	MOG (ENSUPAG00010015182) #21	GABBR1 (ENSUPAG00010015010) #22	OR2H2 (ENSUPAG00010014998) #25
Squirrel	MODERN SPECIES	323	ENSSTOG00000015560 ##29	ENSSTOG00000021130 ##29	ENSSTOG00000023539 ##29	ENSSTOG00000025614 ##29	ENSSTOG00000019725 ##29	ENSSTOG00000031070	TRIM26 (ENSSTOG00000009252)	TRIM15 (ENSSTOG00000019723)	TRIM10 (ENSSTOG00000001960)	TRIM40 (ENSSTOG00000001956)	RNF39 (ENSSTOG00000005658) #16	PPP1R11 (ENSSTOG00000003632) #17	POLR1H (ENSSTOG00000005646) #18	ENSSTOG00000025605 #19	MOG (ENSSTOG00000002496) #21	GABBR1 (ENSSTOG00000002478) #22	OR2H2 (ENSSTOG00000019745) #25	ENSSTOG00000034799	ENSSTOG00000026272 #25	UBD (ENSSTOG00000020158) #26	ENSSTOG00000032360	ENSSTOG00000021100 #27	ENSSTOG00000022909	ENSSTOG00000028497	ENSSTOG00000027804	ENSSTOG00000019731 ##31	ENSSTOG00000034270	ENSSTOG00000027981 ##29	ENSSTOG00000034171	ENSSTOG00000026021	ENSSTOG00000028959
Alpin marmot	MODERN SPECIES	157	ENSMMMG00000024246 ##29	ENSMMMG00000023021 ##29	ENSMMMG00000022970	TRIM26 (ENSMMMG00000022953)	TRIM15 (ENSMMMG00000022946)	TRIM10 (ENSMMMG00000022943)	TRIM40 (ENSMMMG00000022941)	TRIM31 (ENSMMMG00000022938)	RNF39 (ENSMMMG00000022936) #16	ENSMMMG00000022932 #17	POLR1H (ENSMMMG00000022927) #18	ENSMMMG00000022924 #19	ENSMMMG00000022922	ENSMMMG00000022916	MOG (ENSMMMG00000022902) #21	GABBR1 (ENSMMMG00000022887) #22	OR2H2 (ENSMMMG00000022882) #25	OR2H1 (ENSMMMG00000022877) #25	UBD (ENSMMMG00000022874) #26	ENSMMMG00000022865 #27	ENSMMMG00000022859	ENSMMMG00000022858
Eurasian red squirrel	MODERN SPECIES	16	ENSSVLG00005010289 ##29	ENSSVLG00005010399 ##29	ENSSVLG00005010431	ENSSVLG00005010462	TRIM26 (ENSSVLG00005010640)	TRIM15 (ENSSVLG00005010673)	TRIM10 (ENSSVLG00005010771)	TRIM40 (ENSSVLG00005010936)	ENSSVLG00005011053	RNF39 (ENSSVLG00005011152) #16	PPP1R11 (ENSSVLG00005011203) #17	POLR1H (ENSSVLG00005011270) #18	ENSSVLG00005011319 #19	ENSSVLG00005011360	MOG (ENSSVLG00005011777) #21	GABBR1 (ENSSVLG00005012290) #22	OR2H2 (ENSSVLG00005012580) #25	VHL (ENSSVLG00005012601)	ENSSVLG00005012643 #25	ENSSVLG00005012672 #25	UBD (ENSSVLG00005012732) #26	OR2I1P (ENSSVLG00005010976) #27	OR10C1 (ENSSVLG00005011012) #28	ENSSVLG00005011048	ENSSVLG00005011081	OR11A1 (ENSSVLG00005011126)	ENSSVLG00005011141	ENSSVLG00005011164	ENSSVLG00005011222	ENSSVLG00005011287	OR12D3 (ENSSVLG00005011310)
Lagomorpha	ANCESTRAL SPECIES	71	ENSGT00940000158047	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00940000165871	ENSGT00940000158668.c	ENSGT00940000162589	ENSGT00940000161525	ENSGT00710000106875	ENSGT00940000163585	ENSGT00940000162641 #16	ENSGT00390000001153 #17	ENSGT00390000008126 #18	ENSGT00390000016534.A #19	ENSGT00390000002599	ENSGT00940000153527.d #21	ENSGT00940000157642 #22	ENSGT01100000263548.b.a.a.a.b.a #25	ENSGT00910000144359 #26	ENSGT01050000244815.A.c.b.b #28	ENSGT00940000163392	ENSGT00870000136672	ENSGT00940000156465	ENSGT01090000260024.A.a.a.b.b.a #30	ENSGT00940000163236.a	ENSGT01050000244828.c.b.b.a.a.b	ENSGT01100000263548.a.a.a #31	ENSGT01100000263548.b.a.a.b.c.b ##31	ENSGT01100000263486.a.b.a.a.a.a.a.a ##27	ENSGT01100000263548.b.a.a.b.d ##31	ENSGT01100000263548.b.a.a.a.b.b ##31	ENSGT01100000263548.a.b.a ##31
Rabbit	MODERN SPECIES	3	ENSOCUG00000010984 ##29	ENSOCUG00000008993 ##29	ENSOCUG00000023505	TRIM26 (ENSOCUG00000015700)	TRIM15 (ENSOCUG00000015687)	TRIM10 (ENSOCUG00000015679)	TRIM40 (ENSOCUG00000015671)	ENSOCUG00000015660	RNF39 (ENSOCUG00000015653) #16	PPP1R11 (ENSOCUG00000015648) #17	ENSOCUG00000037845 #19	ENSOCUG00000030630	ZFP57 (ENSOCUG00000015627)	MOG (ENSOCUG00000015616) #21	OR2H1 (ENSOCUG00000021373) #25	GABBR1 (ENSOCUG00000015575) #22	OR2H2 (ENSOCUG00000006836) #25	UBD (ENSOCUG00000028108) #26	OR10C1 (ENSOCUG00000005416) #28	OR11A1 (ENSOCUG00000011485)	ENSOCUG00000027532	ENSOCUG00000024164	ENSOCUG00000034065	ENSOCUG00000025180	OR5V1 (ENSOCUG00000001694) #30	OR12D3 (ENSOCUG00000017472)	OR14J1 (ENSOCUG00000007254)	ENSOCUG00000011394 #31	ENSOCUG00000028081 ##31	ENSOCUG00000013888 ##27	ENSOCUG00000023234 ##31
Pika	MODERN SPECIES	4607														ZFP57 (ENSOPRG00000011798)	MOG (ENSOPRG00000011783) #21	GABBR1 (ENSOPRG00000011761) #22	ENSOPRG00000011756 #25