Murinae	ANCESTRAL SPECIES	3	ENSGT00950000182942.b.a.a	ENSGT00950000182942.b.b	ENSGT00940000157165 #7	ENSGT00390000009677 #8	ENSGT00940000154222.d.b.d.b #9	ENSGT00390000017671.a #11	ENSGT00940000158741 #12	ENSGT00530000063023.B.o.b #13	ENSGT00530000063023.B.o.a #14	ENSGT00940000155094 #15	ENSGT00940000156485 #17	ENSGT00390000000803 #18	ENSGT00940000162896 #19	ENSGT00390000004417.a #20	ENSGT00390000008749.e #21	ENSGT00940000153505.a.a.c.a.a.a.b.a.b #22	ENSGT00940000153505.a.a.c.a.a.a.a.b #23	ENSGT00940000164244.a	ENSGT00610000087446	ENSGT00390000016735 #26	ENSGT00390000000053 #27	ENSGT00940000159680 #28	ENSGT00390000005147 #29	ENSGT00940000160257 #30	ENSGT00940000160389 #31	ENSGT00510000047770.c.a #32	ENSGT00940000153116.C.b #33	ENSGT00940000161935	ENSGT00940000160315 #34	ENSGT00390000007170 #35	ENSGT00940000158145 #36
Rat	MODERN SPECIES	18	B3gat1 (ENSRNOG00000007142) #7	Eepd1 (ENSRNOG00000006931) #8	Septin7 (ENSRNOG00000006545) #9	LOC500959 (ENSRNOG00000055222) #10	Herpud2 (ENSRNOG00000029995) #11	Tbx20 (ENSRNOG00000016181) #12	Dpy19l2 (ENSRNOG00000045585) #13	Dpy19l1 (ENSRNOG00000026589) #14	Npsr1 (ENSRNOG00000015863) #15	ENSRNOG00000063092 #16	Bmper (ENSRNOG00000015357) #17	Bbs9 (ENSRNOG00000015189) #18	Rp9 (ENSRNOG00000029456) #19	Matcap2 (ENSRNOG00000026979) #20	Anln (ENSRNOG00000014343) #21	Zfp717 (ENSRNOG00000014331) #22	LOC103690166 (ENSRNOG00000055496) #23	LOC100911320 (ENSRNOG00000069976) #24	LOC120094092 (ENSRNOG00000059163) #25	Acp5 (ENSRNOG00000046261) #26	Elof1 (ENSRNOG00000014284) #27	Cnn1 (ENSRNOG00000027736) #28	Ecsit (ENSRNOG00000014128) #29	Zfp653 (ENSRNOG00000014065) #30	Elavl3 (ENSRNOG00000013752) #31	Prkcsh (ENSRNOG00000013360) #32	Odad3 (ENSRNOG00000013263) #33	Epor (ENSRNOG00000012619) #34	Swsap1 (ENSRNOG00000012604) #35	Plppr2 (ENSRNOG00000012164) #36	Ccdc159 (ENSRNOG00000011799) #37
Mus	ANCESTRAL SPECIES	4	ENSGT00950000182942.b.a.a	ENSGT00950000182942.b.b	ENSGT00940000157165 #7	ENSGT00390000009677 #8	ENSGT00940000154222.d.b.d.b #9	ENSGT00390000017671.a #11	ENSGT00940000158741 #12	ENSGT00530000063023.B.o.b #13	ENSGT00530000063023.B.o.a #14	ENSGT00940000155094 #15	ENSGT00940000156485 #17	ENSGT00390000000803 #18	ENSGT00940000162896 #19	ENSGT00390000004417.a #20	ENSGT00390000008749.e #21	ENSGT00940000153505.a.a.c.a.a.a.b.a.b #22	ENSGT00940000153505.a.a.c.a.a.a.a.b #23	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a ##22	ENSGT00940000164244.a	ENSGT00610000087446	ENSGT00390000016735 #26	ENSGT00390000000053 #27	ENSGT00940000159680 #28	ENSGT00390000005147 #29	ENSGT00940000160257 #30	ENSGT00940000160389 #31	ENSGT00510000047770.c.a #32	ENSGT00940000153116.C.b #33	ENSGT00940000161935	ENSGT00940000160315 #34	ENSGT00390000007170 #35
Mus_A	ANCESTRAL SPECIES	4	ENSGT00950000182942.b.b	ENSGT00940000157165 #7	ENSGT00390000009677 #8	ENSGT00940000154222.d.b.d.b #9	ENSGT00390000017671.a #11	ENSGT00940000158741 #12	ENSGT00390000016779.b.a.b	ENSGT00530000063023.B.o.b #13	ENSGT00530000063023.B.o.a #14	ENSGT00940000155094 #15	ENSGT00940000156485 #17	ENSGT00390000000803 #18	ENSGT00940000162896 #19	ENSGT00390000004417.a #20	ENSGT00390000008749.e #21	ENSGT00940000153505.a.a.c.a.a.a.b.a.b #22	ENSGT00940000153505.a.a.c.a.a.a.a.b #23	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a ##22	ENSGT00940000164244.a	ENSGT00610000087446	ENSGT00390000016735 #26	ENSGT00390000000053.i #27	ENSGT00940000159680 #28	ENSGT00390000005147 #29	ENSGT00940000160257 #30	ENSGT00940000160389 #31	ENSGT00510000047770.c.a #32	ENSGT00940000153116.C.b #33	ENSGT00940000161935	ENSGT00940000160315 #34	ENSGT00390000007170 #35
Mus_B	ANCESTRAL SPECIES	3	ENSGT00950000182942.b.b	ENSGT00940000157165 #7	ENSGT00390000009677 #8	ENSGT00940000154222.d.b.d.b #9	ENSGT00390000017671.a #11	ENSGT00940000158741 #12	ENSGT00390000016779.b.a.b	ENSGT00530000063023.B.o.b #13	ENSGT00530000063023.B.o.a #14	ENSGT00940000155094 #15	ENSGT00940000156485 #17	ENSGT00390000000803 #18	ENSGT00940000162896 #19	ENSGT00390000004417.a #20	ENSGT00390000008749.e #21	ENSGT00940000153505.a.a.c.a.a.a.b.a.b #22	ENSGT00940000153505.a.a.c.a.a.a.a.b #23	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a ##22	ENSGT00940000164244.a	ENSGT00610000087446	ENSGT00390000016735 #26	ENSGT00390000000053.i #27	ENSGT00940000159680 #28	ENSGT00390000005147 #29	ENSGT00940000160257 #30	ENSGT00940000160389 #31	ENSGT00510000047770.c.a #32	ENSGT00940000153116.C.b #33	ENSGT00940000161935	ENSGT00940000160315 #34	ENSGT00390000007170 #35
Mus_C	ANCESTRAL SPECIES	8	ENSGT00950000182942.b.b	ENSGT00940000157165 #7	ENSGT00390000009677 #8	ENSGT00940000154222.d.b.d.b #9	ENSGT00390000017671.a #11	ENSGT00940000158741 #12	ENSGT00390000016779.b.a.b	ENSGT00530000063023.B.o.b #13	ENSGT00530000063023.B.o.a #14	ENSGT00940000155094 #15	ENSGT00940000156485 #17	ENSGT00390000000803 #18	ENSGT00940000162896 #19	ENSGT00390000004417.a #20	ENSGT00390000008749.e #21	ENSGT00940000153505.a.a.c.a.a.a.b.a.b #22	ENSGT00940000153505.a.a.c.a.a.a.a.b #23	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a ##22	ENSGT00940000164244.a	ENSGT00610000087446	ENSGT00390000016735 #26	ENSGT00390000000053.i #27	ENSGT00940000159680 #28	ENSGT00390000005147 #29	ENSGT00940000160257 #30	ENSGT00940000160389 #31	ENSGT00510000047770.c.a #32	ENSGT00940000153116.C.b #33	ENSGT00940000161935	ENSGT00940000160315 #34	ENSGT00390000007170 #35
Steppe mouse	MODERN SPECIES	3067										Bmper (ENSMSIG00000025060) #17	Bbs9 (ENSMSIG00000024757) #18	Rp9 (ENSMSIG00000024723) #19	ENSMSIG00000024696 #20	Anln (ENSMSIG00000024620) #21	ENSMSIG00000024615	Zfp810 (ENSMSIG00000024582) #22	ENSMSIG00000024574	Zfp599 (ENSMSIG00000024565) #23	Zfp809 (ENSMSIG00000024525) ##22	ENSMSIG00000024520	ENSMSIG00000024509	Zfp872 (ENSMSIG00000024500)	ENSMSIG00000024490	Pigyl (ENSMSIG00000024448)
spretus	MODERN SPECIES	18	B3gat1 (MGP_SPRETEiJ_G0033042) #7	Eepd1 (MGP_SPRETEiJ_G0033041) #8	Septin7 (MGP_SPRETEiJ_G0033040) #9	Herpud2 (MGP_SPRETEiJ_G0033039) #11	Tbx20 (MGP_SPRETEiJ_G0033038) #12	Cypt4 (MGP_SPRETEiJ_G0033037)	Dpy19l2 (MGP_SPRETEiJ_G0033036) #13	Dpy19l1 (MGP_SPRETEiJ_G0033035) #14	Npsr1 (MGP_SPRETEiJ_G0033034) #15	Bmper (MGP_SPRETEiJ_G0033033) #17	Bbs9 (MGP_SPRETEiJ_G0033032) #18	MGP_SPRETEiJ_G0033031	Rp9 (MGP_SPRETEiJ_G0033030) #19	9530077C05Rik (MGP_SPRETEiJ_G0033029) #20	Anln (MGP_SPRETEiJ_G0033028) #21	Zfp810 (MGP_SPRETEiJ_G0033027) #22	Zfp599 (MGP_SPRETEiJ_G0033026) #23	Zfp809 (MGP_SPRETEiJ_G0033025) ##22	MGP_SPRETEiJ_G0033024	Pigyl (MGP_SPRETEiJ_G0033023)	Acp5 (MGP_SPRETEiJ_G0033022) #26	Elof1 (MGP_SPRETEiJ_G0033021) #27	Cnn1 (MGP_SPRETEiJ_G0033020) #28	Ecsit (MGP_SPRETEiJ_G0033019) #29	Zfp653 (MGP_SPRETEiJ_G0033018) #30	MGP_SPRETEiJ_G0033017 #31	Prkcsh (MGP_SPRETEiJ_G0033016) #32	Odad3 (MGP_SPRETEiJ_G0033015) #33	Rgl3 (MGP_SPRETEiJ_G0033014)	Epor (MGP_SPRETEiJ_G0033013) #34	Plppr2 (MGP_SPRETEiJ_G0033012) #36
Mouse	MODERN SPECIES	18	Glb1l2 (ENSMUSG00000036395)	B3gat1 (ENSMUSG00000045994) #7	Eepd1 (ENSMUSG00000036611) #8	Septin7 (ENSMUSG00000001833) #9	Herpud2 (ENSMUSG00000008429) #11	Tbx20 (ENSMUSG00000031965) #12	Cypt4 (ENSMUSG00000047995)	Dpy19l2 (ENSMUSG00000085576) #13	Dpy19l1 (ENSMUSG00000043067) #14	Npsr1 (ENSMUSG00000043659) #15	Bmper (ENSMUSG00000031963) #17	Bbs9 (ENSMUSG00000035919) #18	9530077C05Rik (ENSMUSG00000036411) #20	Rp9 (ENSMUSG00000032239) #19	Anln (ENSMUSG00000036777) #21	Zfp810 (ENSMUSG00000066829) #22	Zfp599 (ENSMUSG00000062794) #23	Zfp809 (ENSMUSG00000057982) ##22	Zfp872 (ENSMUSG00000074472)	Pigyl (ENSMUSG00000010607)	Acp5 (ENSMUSG00000001348) #26	Elof1 (ENSMUSG00000013822) #27	Cnn1 (ENSMUSG00000001349) #28	Ecsit (ENSMUSG00000066839) #29	Zfp653 (ENSMUSG00000038895) #30	Elavl3 (ENSMUSG00000003410) #31	Prkcsh (ENSMUSG00000003402) #32	Odad3 (ENSMUSG00000039632) #33	Rgl3 (ENSMUSG00000040146)	Epor (ENSMUSG00000006235) #34	Swsap1 (ENSMUSG00000051238) #35
Ryukyu mouse	MODERN SPECIES	18	B3gat1 (MGP_CAROLIEiJ_G0031919) #7	Eepd1 (MGP_CAROLIEiJ_G0031918) #8	Septin7 (MGP_CAROLIEiJ_G0031917) #9	Herpud2 (MGP_CAROLIEiJ_G0031916) #11	Tbx20 (MGP_CAROLIEiJ_G0031915) #12	MGP_CAROLIEiJ_G0031914 #13	Cypt4 (MGP_CAROLIEiJ_G0031913)	Dpy19l1 (MGP_CAROLIEiJ_G0031912) #14	Npsr1 (MGP_CAROLIEiJ_G0031911) #15	Bmper (MGP_CAROLIEiJ_G0031910) #17	MGP_CAROLIEiJ_G0031909 #18	MGP_CAROLIEiJ_G0031908	Rp9 (MGP_CAROLIEiJ_G0031907) #19	9530077C05Rik (MGP_CAROLIEiJ_G0031906) #20	MGP_CAROLIEiJ_G0031905 #21	Zfp810 (MGP_CAROLIEiJ_G0031904) #22	Zfp599 (MGP_CAROLIEiJ_G0031903) #23	Zfp809 (MGP_CAROLIEiJ_G0031902) ##22	MGP_CAROLIEiJ_G0031901 #24	Pigyl (MGP_CAROLIEiJ_G0031900)	Acp5 (MGP_CAROLIEiJ_G0031899) #26	Elof1 (MGP_CAROLIEiJ_G0031898) #27	Cnn1 (MGP_CAROLIEiJ_G0031897) #28	Ecsit (MGP_CAROLIEiJ_G0031896) #29	Zfp653 (MGP_CAROLIEiJ_G0031895) #30	Elavl3 (MGP_CAROLIEiJ_G0031894) #31	Prkcsh (MGP_CAROLIEiJ_G0031893) #32	Odad3 (MGP_CAROLIEiJ_G0031892) #33	Rgl3 (MGP_CAROLIEiJ_G0031891)	Epor (MGP_CAROLIEiJ_G0031890) #34	Swsap1 (MGP_CAROLIEiJ_G0031889) #35
Shrew mouse	MODERN SPECIES	1	Glb1l2 (MGP_PahariEiJ_G0014785)	B3gat1 (MGP_PahariEiJ_G0014784) #7	Eepd1 (MGP_PahariEiJ_G0014783) #8	Septin7 (MGP_PahariEiJ_G0014782) #9	Herpud2 (MGP_PahariEiJ_G0014781) #11	MGP_PahariEiJ_G0014780	Tbx20 (MGP_PahariEiJ_G0014779) #12	Dpy19l2 (MGP_PahariEiJ_G0014778) #13	Dpy19l1 (MGP_PahariEiJ_G0014777) #14	Npsr1 (MGP_PahariEiJ_G0014776) #15	Bmper (MGP_PahariEiJ_G0014775) #17	Bbs9 (MGP_PahariEiJ_G0014774) #18	Rp9 (MGP_PahariEiJ_G0014773) #19	9530077C05Rik (MGP_PahariEiJ_G0014772) #20	Anln (MGP_PahariEiJ_G0014771) #21	Zfp810 (MGP_PahariEiJ_G0014770) #22	Zfp599 (MGP_PahariEiJ_G0014769) #23	Zfp809 (MGP_PahariEiJ_G0014768) ##22	MGP_PahariEiJ_G0014767	Pigyl (MGP_PahariEiJ_G0014766)	Acp5 (MGP_PahariEiJ_G0014765) #26	Elof1 (MGP_PahariEiJ_G0014764) #27	Cnn1 (MGP_PahariEiJ_G0014763) #28	Ecsit (MGP_PahariEiJ_G0014762) #29	Zfp653 (MGP_PahariEiJ_G0014761) #30	Elavl3 (MGP_PahariEiJ_G0014760) #31	Prkcsh (MGP_PahariEiJ_G0014759) #32	Odad3 (MGP_PahariEiJ_G0014758) #33	Rgl3 (MGP_PahariEiJ_G0014757)	Epor (MGP_PahariEiJ_G0014756) #34	Swsap1 (MGP_PahariEiJ_G0014755) #35