Muroidea DUPLICATION Muroidea ANCESTRAL SPECIES ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b #22 Muroidea_A ANCESTRAL SPECIES 25 ENSGT00390000008060 #7 ENSGT00940000156523.b #8 ENSGT00940000159142 #9 ENSGT00940000162161.A #10 ENSGT00940000160356 #11 ENSGT00500000045074 #12 ENSGT00510000049549 #13 ENSGT00940000160480 #14 ENSGT00950000182870.a.a.a.a #15 ENSGT00940000161259.B #16 ENSGT00940000154630.a #17 ENSGT01030000234573.A.b.b.a #18 ENSGT00900000143418 #19 ENSGT00940000155885 #20 ENSGT00950000183069.b.b.a.a.e.b.b #21 ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b #22 ENSGT00940000163952.b #23 ENSGT00940000163952.a #24 ENSGT00940000153523.b.a #25 ENSGT00950000183216.d.j.b.a #26 ENSGT00940000153523.b.b #27 ENSGT00950000183216.d.j.b.b #28 ENSGT00940000162084 #29 ENSGT00940000159972 #30 ENSGT00390000003207 #31 ENSGT00940000162117 #32 ENSGT00940000162852.a #33 ENSGT01030000234635.a.a.a.b #34 ENSGT00940000158035 #35 ENSGT00940000154227.b #36 ENSGT00940000160234 #37 Cricetidae ANCESTRAL SPECIES 25 ENSGT00390000008060 #7 ENSGT00940000156523.b #8 ENSGT00940000159142 #9 ENSGT00940000162161.A #10 ENSGT00940000160356 #11 ENSGT00500000045074 #12 ENSGT00510000049549 #13 ENSGT00940000160480 #14 ENSGT00950000182870.a.a.a.a #15 ENSGT00940000161259.B #16 ENSGT00940000154630.a #17 ENSGT01030000234573.A.b.b.a #18 ENSGT00900000143418 #19 ENSGT00940000155885 #20 ENSGT00950000183069.b.b.a.a.e.b.b #21 ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b #22 ENSGT00940000163952.b #23 ENSGT00940000163952.a #24 ENSGT00940000153523.b.a #25 ENSGT00950000183216.d.j.b.a #26 ENSGT00940000153523.b.b #27 ENSGT00940000162084 #29 ENSGT00940000159972 #30 ENSGT00390000003207 #31 ENSGT00940000162117 #32 ENSGT00940000162852.a #33 ENSGT01030000234635.a.a.a.b #34 ENSGT00940000158035 #35 ENSGT00940000154227.b #36 ENSGT00940000160234 #37 ENSGT00800000125293 Cricetidae_B ANCESTRAL SPECIES 57 ENSGT00950000183069.b.b.a.a.e.b.b #21 ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b #22 ENSGT00940000163952.b #23 ENSGT00940000163952.a #24 ENSGT00940000153523.b.a #25 ENSGT00940000153523.b.b #27 ENSGT00940000159972 #30 ENSGT00390000003207 #31 ENSGT00940000162117 #32 ENSGT00940000162852.a #33 ENSGT01030000234635.a.a.a.b #34 ENSGT00940000158035 #35 ENSGT00940000154227.b #36 ENSGT00940000160234 #37 ENSGT00800000125293 ENSGT00940000162086 ENSGT00940000154549.b Northern American deer mouse MODERN SPECIES 14 Tubb4a (ENSPEMG00000028633) Tnfsf9 (ENSPEMG00000020989) Cd70 (ENSPEMG00000015587) ENSPEMG00000011159 ENSPEMG00000015087 Tnfsf14 (ENSPEMG00000000292) ENSPEMG00000001526 Gpr108 (ENSPEMG00000030315) Trip10 (ENSPEMG00000017394) ENSPEMG00000031058 Vav1 (ENSPEMG00000015943) Adgre1 (ENSPEMG00000013357) ENSPEMG00000008525 ENSPEMG00000028855 ENSPEMG00000030002 2610008E11Rik (ENSPEMG00000029764) #22 ENSPEMG00000008518 #23 ENSPEMG00000008828 #24 Or7a36 (ENSPEMG00000011041) #25 ENSPEMG00000009495 #27 ENSPEMG00000015450 #30 Ccdc105 (ENSPEMG00000008931) #31 Casp14 (ENSPEMG00000003806) #32 Or1i2 (ENSPEMG00000002732) #33 Syde1 (ENSPEMG00000017967) #34 Ilvbl (ENSPEMG00000016636) #35 Or10b1 (ENSPEMG00000031391) #36 Notch3 (ENSPEMG00000003368) #37 ENSPEMG00000026978 Ephx3 (ENSPEMG00000001114) Brd4 (ENSPEMG00000015342) Prairie vole MODERN SPECIES 353 Pkdcc (ENSMOCG00000002662) Eml4 (ENSMOCG00000020764) Cox7a2l (ENSMOCG00000012418) Kcng3 (ENSMOCG00000011778) Mta3 (ENSMOCG00000017936) ##18 Haao (ENSMOCG00000015453) Zfp36l2 (ENSMOCG00000011066) ENSMOCG00000021185 ENSMOCG00000014683 ENSMOCG00000011429 ENSMOCG00000011467 ENSMOCG00000007015 ENSMOCG00000021154 ENSMOCG00000020687 ENSMOCG00000017805 #21 2610008E11Rik (ENSMOCG00000008949) #22 ENSMOCG00000008222 #23 Or7a36 (ENSMOCG00000002619) #25 Slc1a6 (ENSMOCG00000020405) #30 Ccdc105 (ENSMOCG00000013529) #31 Casp14 (ENSMOCG00000013844) #32 Syde1 (ENSMOCG00000010233) #34 Ilvbl (ENSMOCG00000007265) #35 Notch3 (ENSMOCG00000001344) #37 Ephx3 (ENSMOCG00000016735) Brd4 (ENSMOCG00000019710) Akap8 (ENSMOCG00000001588) Akap8l (ENSMOCG00000017098) Wiz (ENSMOCG00000004182) Rasal3 (ENSMOCG00000000323) Pglyrp2 (ENSMOCG00000012093) Cricetinae ANCESTRAL SPECIES 4 ENSGT00390000008060 #7 ENSGT00940000156523.b #8 ENSGT00940000159142 #9 ENSGT00940000162161.A #10 ENSGT00940000160356 #11 ENSGT00500000045074 #12 ENSGT00510000049549 #13 ENSGT00940000160480 #14 ENSGT00950000182870.a.a.a.a #15 ENSGT00940000161259.B #16 ENSGT00940000154630.a #17 ENSGT01030000234573.A.b.b.a #18 ENSGT00900000143418 #19 ENSGT00940000155885 #20 ENSGT00950000183069.b.b.a.a.e.b.b #21 ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b #22 ENSGT00940000163952.b #23 ENSGT00940000163952.a #24 ENSGT00940000153523.b.a #25 ENSGT00950000183216.d.j.b.a #26 ENSGT00940000153523.b.b #27 ENSGT00940000162084 #29 ENSGT00940000159972 #30 ENSGT00390000003207 #31 ENSGT00940000162117 #32 ENSGT00940000162852.a #33 ENSGT01030000234635.a.a.a.b #34 ENSGT00940000158035 #35 ENSGT00940000160234 #37 ENSGT00940000162086 ENSGT00940000154549.b Golden Hamster MODERN SPECIES 764 ENSMAUG00000020560 #11 Tpgs1 (ENSMAUG00000001840) #12 Madcam1 (ENSMAUG00000021497) #13 Odf3l2 (ENSMAUG00000010358) #14 Shc2 (ENSMAUG00000007720) #15 C2cd4c (ENSMAUG00000015978) #16 ENSMAUG00000013218 Theg (ENSMAUG00000005159) #17 ENSMAUG00000008189 ##18 ENSMAUG00000005384 #19 Plpp2 (ENSMAUG00000009359) #20 ENSMAUG00000013541 ENSMAUG00000009575 ENSMAUG00000020592 #21 ENSMAUG00000008319 #21 2610008E11Rik (ENSMAUG00000007597) #22 ENSMAUG00000011922 #23 Or7a37 (ENSMAUG00000018329) #26 Slc1a6 (ENSMAUG00000010823) #30 Ccdc105 (ENSMAUG00000015800) #31 Casp14 (ENSMAUG00000015211) #32 Syde1 (ENSMAUG00000010021) #34 Ilvbl (ENSMAUG00000015514) #35 Notch3 (ENSMAUG00000021946) #37 Ephx3 (ENSMAUG00000010068) Brd4 (ENSMAUG00000019036) Akap8 (ENSMAUG00000021975) Akap8l (ENSMAUG00000021519) ENSMAUG00000020479 Rasal3 (ENSMAUG00000010568) Pglyrp2 (ENSMAUG00000013267) Chinese hamster chok1gshd MODERN SPECIES 2 Polrmt (ENSCGRG00001021311) #7 Hcn2 (ENSCGRG00001023674) #8 Bsg (ENSCGRG00001018157) #9 Gzmm (ENSCGRG00001016920) #10 ENSCGRG00001018767 #11 Tpgs1 (ENSCGRG00001018429) #12 Madcam1 (ENSCGRG00001017494) #13 Odf3l2 (ENSCGRG00001016570) #14 Shc2 (ENSCGRG00001014392) #15 C2cd4c (ENSCGRG00001010202) #16 Theg (ENSCGRG00001019545) #17 ENSCGRG00001016569 #19 Mier2 (ENSCGRG00001014133) #18 Plpp2 (ENSCGRG00001000586) #20 ENSCGRG00001023576 #21 2610008E11Rik (ENSCGRG00001010752) #22 ENSCGRG00001008499 #23 ENSCGRG00001007761 #24 ENSCGRG00001009644 #24 Or7a36 (ENSCGRG00001006807) #25 Or7a37 (ENSCGRG00001024013) #26 ENSCGRG00001010046 #27 ENSCGRG00001000829 Or7c70 (ENSCGRG00001007644) #29 Slc1a6 (ENSCGRG00001015926) #30 Ccdc105 (ENSCGRG00001014217) #31 Casp14 (ENSCGRG00001015488) #32 Or1i2 (ENSCGRG00001010185) #33 Syde1 (ENSCGRG00001005250) #34 Ilvbl (ENSCGRG00001003112) #35 ENSCGRG00001001082 Murinae ANCESTRAL SPECIES 25 ENSGT00390000008060 #7 ENSGT00940000156523.b #8 ENSGT00940000159142 #9 ENSGT00940000162161.A #10 ENSGT00940000160356 #11 ENSGT00500000045074 #12 ENSGT00510000049549 #13 ENSGT00940000160480 #14 ENSGT00950000182870.a.a.a.a #15 ENSGT00940000161259.B #16 ENSGT00940000154630.a #17 ENSGT01030000234573.A.b.b.a #18 ENSGT00900000143418 #19 ENSGT00940000155885 #20 ENSGT00950000183069.b.b.a.a.e.b.b #21 ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b #22 ENSGT00940000163952.b #23 ENSGT00940000163952.a.c #24 ENSGT00940000163952.a.d #24 ENSGT00940000153523.b.a #25 ENSGT00950000183216.d.j.b.a #26 ENSGT00940000153523.b.b #27 ENSGT00950000183216.d.j.b.b #28 ENSGT00940000162084 #29 ENSGT00940000159972 #30 ENSGT00390000003207 #31 ENSGT00940000162117 #32 ENSGT00940000162852.a #33 ENSGT01030000234635.a.a.a.b #34 ENSGT00940000158035 #35 ENSGT00940000154227.b #36 Mus ANCESTRAL SPECIES 15 ENSGT00940000161721 ENSGT00390000008060 #7 ENSGT00940000156523.b #8 ENSGT00940000159142 #9 ENSGT00940000162161.A #10 ENSGT00940000160356 #11 ENSGT00500000045074 #12 ENSGT00510000049549 #13 ENSGT00940000160480 #14 ENSGT00950000182870.a.a.a.a #15 ENSGT00940000161259.B #16 ENSGT00940000154630.a #17 ENSGT01030000234573.A.b.b.a #18 ENSGT00940000155885 #20 ENSGT00950000183069.b.b.a.a.e.b.b.c #21 ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b #22 ENSGT00940000163952.a.c #24 ENSGT00940000163952.a.d #24 ENSGT00940000153523.b.a #25 ENSGT00950000183216.d.j.b.a #26 ENSGT00940000153523.b.b #27 ENSGT00950000183216.d.j.b.b #28 ENSGT00940000162084 #29 ENSGT00940000159972 #30 ENSGT00390000003207 #31 ENSGT00940000162117 #32 ENSGT00940000162852.a #33 ENSGT01030000234635.a.a.a.b #34 ENSGT00940000158035 #35 ENSGT00940000154227.b #36 ENSGT00390000003874 Mus_A ANCESTRAL SPECIES 11 ENSGT00940000161721 ENSGT00390000008060 #7 ENSGT00940000156523.b #8 ENSGT00940000159142 #9 ENSGT00940000162161.A #10 ENSGT00940000160356.k #11 ENSGT00500000045074 #12 ENSGT00510000049549 #13 ENSGT00940000160480 #14 ENSGT00950000182870.a.a.a.a #15 ENSGT00940000161259.B #16 ENSGT00940000154630.a #17 ENSGT01030000234573.A.b.b.a #18 ENSGT00940000155885 #20 ENSGT00950000183069.b.b.a.a.e.b.b.c #21 ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b #22 ENSGT00940000163952.a.c #24 ENSGT00940000163952.a.d #24 ENSGT00940000153523.b.a #25 ENSGT00950000183216.d.j.b.a #26 ENSGT00940000153523.b.b #27 ENSGT00950000183216.d.j.b.b #28 ENSGT00940000162084 #29 ENSGT00940000159972 #30 ENSGT00390000003207 #31 ENSGT00940000162117 #32 ENSGT00940000162852.a #33 ENSGT01030000234635.a.a.a.b #34 ENSGT00940000158035 #35 ENSGT00940000154227.b #36 ENSGT00390000003874 Mus_B ANCESTRAL SPECIES 10 ENSGT00390000008060 #7 ENSGT00940000156523.b #8 ENSGT00940000159142 #9 ENSGT00940000162161.A #10 ENSGT00940000160356.k #11 ENSGT00500000045074 #12 ENSGT00510000049549 #13 ENSGT00940000160480 #14 ENSGT00950000182870.a.a.a.a #15 ENSGT00940000161259.B #16 ENSGT00940000154630.a #17 ENSGT01030000234573.A.b.b.a #18 ENSGT00940000155885 #20 ENSGT00950000183069.b.b.a.a.e.b.b.d #21 ENSGT00950000183069.b.b.a.a.e.b.b.c.a.b #21 ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b #22 ENSGT00940000163952.a.c #24 ENSGT00940000163952.a.d #24 ENSGT00940000153523.b.a #25 ENSGT00950000183216.d.j.b.a #26 ENSGT00940000153523.b.b #27 ENSGT00950000183216.d.j.b.b #28 ENSGT00940000162084 #29 ENSGT00940000159972 #30 ENSGT00390000003207 #31 ENSGT00940000162117 #32 ENSGT00940000162852.a #33 ENSGT01030000234635.a.a.a.b #34 ENSGT00940000158035 #35 ENSGT00940000154227.b #36 ENSGT00390000003874 Mouse MODERN SPECIES 1 Bsg (ENSMUSG00000023175) #9 Gzmm (ENSMUSG00000054206) #10 Cdc34 (ENSMUSG00000020307) #11 Tpgs1 (ENSMUSG00000020308) #12 Madcam1 (ENSMUSG00000020310) #13 Odf3l2 (ENSMUSG00000035963) #14 Shc2 (ENSMUSG00000020312) #15 C2cd4c (ENSMUSG00000045912) #16 Theg (ENSMUSG00000020317) #17 Mier2 (ENSMUSG00000042570) #18 Plpp2 (ENSMUSG00000052151) #20 Vmn2r83 (ENSMUSG00000091381) #21 Vmn2r82 (ENSMUSG00000091468) #21 Vmn2r81 (ENSMUSG00000055515) #21 Vmn2r80 (ENSMUSG00000091888) #21 2610008E11Rik (ENSMUSG00000060301) #22 Or7a41 (ENSMUSG00000060205) #24 Or7a35 (ENSMUSG00000063216) #24 Or7a36 (ENSMUSG00000046493) #25 Or7a37 (ENSMUSG00000042774) #26 Or7a42 (ENSMUSG00000094080) #27 Or7a38 (ENSMUSG00000094673) #27 Or7a39 (ENSMUSG00000062873) #28 Or7c70 (ENSMUSG00000051190) #29 Slc1a6 (ENSMUSG00000005357) #30 Ccdc105 (ENSMUSG00000078442) #31 Casp14 (ENSMUSG00000005355) #32 Or1i2 (ENSMUSG00000071185) #33 Syde1 (ENSMUSG00000032714) #34 Ilvbl (ENSMUSG00000032763) #35 Or10b1 (ENSMUSG00000107822) #36 Mus_C ANCESTRAL SPECIES 7 ENSGT00390000008060 #7 ENSGT00940000156523.b #8 ENSGT00940000159142 #9 ENSGT00940000162161.A #10 ENSGT00940000160356.k #11 ENSGT00500000045074 #12 ENSGT00510000049549 #13 ENSGT00940000160480 #14 ENSGT00950000182870.a.a.a.a #15 ENSGT00940000161259.B #16 ENSGT00940000154630.a #17 ENSGT01030000234573.A.b.b.a #18 ENSGT00940000155885 #20 ENSGT00950000183069.b.b.a.a.e.b.b.d #21 ENSGT00950000183069.b.b.a.a.e.b.b.c.a.b #21 ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b #22 ENSGT00940000163952.a.c #24 ENSGT00940000163952.a.d #24 ENSGT00940000153523.b.a #25 ENSGT00950000183216.d.j.b.a #26 ENSGT00940000153523.b.b #27 ENSGT00940000162084 #29 ENSGT00940000159972 #30 ENSGT00390000003207 #31 ENSGT00940000162117 #32 ENSGT00940000162852.a #33 ENSGT01030000234635.a.a.a.b #34 ENSGT00940000158035 #35 ENSGT00940000154227.b #36 ENSGT00390000003874 ENSGT00940000154826 spretus MODERN SPECIES 1 Bsg (MGP_SPRETEiJ_G0016354) #9 Gzmm (MGP_SPRETEiJ_G0016353) #10 Cdc34 (MGP_SPRETEiJ_G0016352) #11 Tpgs1 (MGP_SPRETEiJ_G0016351) #12 Madcam1 (MGP_SPRETEiJ_G0016350) #13 Odf3l2 (MGP_SPRETEiJ_G0016349) #14 Shc2 (MGP_SPRETEiJ_G0016348) #15 C2cd4c (MGP_SPRETEiJ_G0016347) #16 Theg (MGP_SPRETEiJ_G0016346) #17 Mier2 (MGP_SPRETEiJ_G0016345) #18 Plpp2 (MGP_SPRETEiJ_G0016344) #20 Vmn2r83 (MGP_SPRETEiJ_G0016343) #21 MGP_SPRETEiJ_G0016342 #21 MGP_SPRETEiJ_G0016341 #21 MGP_SPRETEiJ_G0016340 #21 2610008E11Rik (MGP_SPRETEiJ_G0016339) #22 Or7a41 (MGP_SPRETEiJ_G0016338) #24 MGP_SPRETEiJ_G0016337 #24 Or7a36 (MGP_SPRETEiJ_G0016336) #25 Or7a37 (MGP_SPRETEiJ_G0016335) #26 Or7a39 (MGP_SPRETEiJ_G0016334) #28 MGP_SPRETEiJ_G0016332 #27 MGP_SPRETEiJ_G0016333 #27 Or7c70 (MGP_SPRETEiJ_G0016331) #29 Slc1a6 (MGP_SPRETEiJ_G0016330) #30 Ccdc105 (MGP_SPRETEiJ_G0016329) #31 Casp14 (MGP_SPRETEiJ_G0016328) #32 Or1i2 (MGP_SPRETEiJ_G0016327) #33 Syde1 (MGP_SPRETEiJ_G0016326) #34 Ilvbl (MGP_SPRETEiJ_G0016325) #35 MGP_SPRETEiJ_G0016324 Steppe mouse MODERN SPECIES 3068 Polrmt (ENSMSIG00000001360) #7 Hcn2 (ENSMSIG00000001317) #8 Bsg (ENSMSIG00000001246) #9 Gzmm (ENSMSIG00000001207) #10 Cdc34 (ENSMSIG00000001145) #11 Tpgs1 (ENSMSIG00000001133) #12 Madcam1 (ENSMSIG00000001087) #13 Odf3l2 (ENSMSIG00000001068) #14 Shc2 (ENSMSIG00000001015) #15 C2cd4c (ENSMSIG00000000990) #16 Theg (ENSMSIG00000000944) #17 Mier2 (ENSMSIG00000000839) #18 Plpp2 (ENSMSIG00000000794) #20 Vmn2r83 (ENSMSIG00000000740) #21 Vmn2r81 (ENSMSIG00000000704) #21 2610008E11Rik (ENSMSIG00000000653) #22 Or7a41 (ENSMSIG00000000636) #24 Or7a35 (ENSMSIG00000000621) #24 Or7a36 (ENSMSIG00000000611) #25 Or7a37 (ENSMSIG00000000592) #26 ENSMSIG00000000580 #27 Or7c70 (ENSMSIG00000000575) #29 Slc1a6 (ENSMSIG00000000543) #30 Ccdc105 (ENSMSIG00000000509) #31 Casp14 (ENSMSIG00000000458) #32 ENSMSIG00000000436 Or1i2 (ENSMSIG00000000403) #33 Syde1 (ENSMSIG00000000382) #34 Ilvbl (ENSMSIG00000000223) #35 Or10b1 (ENSMSIG00000000154) #36 Pdxk (ENSMSIG00000000114) Ryukyu mouse MODERN SPECIES 1 Rnf126 (MGP_CAROLIEiJ_G0015540) MGP_CAROLIEiJ_G0015539 Polrmt (MGP_CAROLIEiJ_G0015538) #7 Hcn2 (MGP_CAROLIEiJ_G0015537) #8 Bsg (MGP_CAROLIEiJ_G0015536) #9 MGP_CAROLIEiJ_G0015535 #10 Cdc34 (MGP_CAROLIEiJ_G0015534) #11 Tpgs1 (MGP_CAROLIEiJ_G0015533) #12 Madcam1 (MGP_CAROLIEiJ_G0015532) #13 Odf3l2 (MGP_CAROLIEiJ_G0015531) #14 Shc2 (MGP_CAROLIEiJ_G0015530) #15 C2cd4c (MGP_CAROLIEiJ_G0015529) #16 Theg (MGP_CAROLIEiJ_G0015528) #17 Mier2 (MGP_CAROLIEiJ_G0015527) #18 Plpp2 (MGP_CAROLIEiJ_G0015526) #20 2610008E11Rik (MGP_CAROLIEiJ_G0015525) #22 Or7a41 (MGP_CAROLIEiJ_G0015524) #24 Or7a35 (MGP_CAROLIEiJ_G0015523) #24 Or7a36 (MGP_CAROLIEiJ_G0015522) #25 Or7a37 (MGP_CAROLIEiJ_G0015521) #26 MGP_CAROLIEiJ_G0015519 #27 Or7a39 (MGP_CAROLIEiJ_G0015520) #28 Or7c70 (MGP_CAROLIEiJ_G0015518) #29 Slc1a6 (MGP_CAROLIEiJ_G0015517) #30 Ccdc105 (MGP_CAROLIEiJ_G0015516) #31 Casp14 (MGP_CAROLIEiJ_G0015515) #32 Or1i2 (MGP_CAROLIEiJ_G0015514) #33 Syde1 (MGP_CAROLIEiJ_G0015513) #34 Ilvbl (MGP_CAROLIEiJ_G0015512) #35 MGP_CAROLIEiJ_G0015511 Pdxk (MGP_CAROLIEiJ_G0015510) Shrew mouse MODERN SPECIES 22 Polrmt (MGP_PahariEiJ_G0030951) #7 Hcn2 (MGP_PahariEiJ_G0030950) #8 Bsg (MGP_PahariEiJ_G0030949) #9 Gzmm (MGP_PahariEiJ_G0030948) #10 MGP_PahariEiJ_G0030947 #11 Tpgs1 (MGP_PahariEiJ_G0030946) #12 Madcam1 (MGP_PahariEiJ_G0030945) #13 Odf3l2 (MGP_PahariEiJ_G0030944) #14 Shc2 (MGP_PahariEiJ_G0030943) #15 C2cd4c (MGP_PahariEiJ_G0030942) #16 Theg (MGP_PahariEiJ_G0030941) #17 Mier2 (MGP_PahariEiJ_G0030940) #18 Plpp2 (MGP_PahariEiJ_G0030939) #20 MGP_PahariEiJ_G0030937 #21 MGP_PahariEiJ_G0030938 #21 2610008E11Rik (MGP_PahariEiJ_G0030936) #22 Or7a36 (MGP_PahariEiJ_G0030935) #25 Or7a37 (MGP_PahariEiJ_G0030934) #26 MGP_PahariEiJ_G0030932 #27 Or7a39 (MGP_PahariEiJ_G0030933) #28 Or7c70 (MGP_PahariEiJ_G0030931) #29 MGP_PahariEiJ_G0030930 #24 Slc1a6 (MGP_PahariEiJ_G0030929) #30 Ccdc105 (MGP_PahariEiJ_G0030928) #31 Casp14 (MGP_PahariEiJ_G0030927) #32 Or1i2 (MGP_PahariEiJ_G0030926) #33 Syde1 (MGP_PahariEiJ_G0030925) #34 Ilvbl (MGP_PahariEiJ_G0030924) #35 Pdxk (MGP_PahariEiJ_G0030923) Cstb (MGP_PahariEiJ_G0030922) Rrp1 (MGP_PahariEiJ_G0030921) Rat MODERN SPECIES 17 Bsg (ENSRNOG00000008414) #9 Gzmm (ENSRNOG00000030530) #10 Cdc34 (ENSRNOG00000060530) #11 Tpgs1 (ENSRNOG00000008296) #12 Madcam1 (ENSRNOG00000008217) #13 Odf3l2 (ENSRNOG00000008199) #14 Shc2 (ENSRNOG00000008030) #15 C2cd4c (ENSRNOG00000008026) #16 Theg (ENSRNOG00000007960) #17 Mier2 (ENSRNOG00000000175) #18 ENSRNOG00000070264 #19 Plpp2 (ENSRNOG00000000177) #20 ENSRNOG00000069262 Giot1 (ENSRNOG00000051563) Vom2r53 (ENSRNOG00000007730) #21 LOC691170 (ENSRNOG00000022871) #22 Or7a44 (ENSRNOG00000031688) #23 Or7a41 (ENSRNOG00000039449) #24 Or7a35 (ENSRNOG00000039448) #24 Or7a36 (ENSRNOG00000067424) #25 Or7a36 (ENSRNOG00000062310) #25 Or7a38d (ENSRNOG00000069189) #27 Or7a38b (ENSRNOG00000065304) #28 Or7a38c (ENSRNOG00000064163) #28 Or7a38 (ENSRNOG00000062903) #28 Or7a39 (ENSRNOG00000065533) #28 Or7a38e (ENSRNOG00000062508) #28 Or7c70 (ENSRNOG00000042262) #29 Slc1a6 (ENSRNOG00000007509) #30 Ccdc105 (ENSRNOG00000007375) #31 Casp14 (ENSRNOG00000007352) #32 Muroidea ANCESTRAL SPECIES ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a ##22 Murinae ANCESTRAL SPECIES ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a ##22 Mus ANCESTRAL SPECIES 4 ENSGT00390000008201 ENSGT00940000158145 ENSGT00390000007170 ENSGT00940000160315 ENSGT00940000161935 ENSGT00940000153116.C.b ENSGT00510000047770.c.a ENSGT00940000160389 ENSGT00940000160257 ENSGT00390000005147 ENSGT00940000159680 ENSGT00390000000053 ENSGT00390000016735 ENSGT00610000087446 ENSGT00940000164244.a ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a ##22 ENSGT00940000153505.a.a.c.a.a.a.a.b ##22 ENSGT00940000153505.a.a.c.a.a.a.b.a.b ##22 ENSGT00390000008749.e ENSGT00390000004417.a ENSGT00940000162896 ENSGT00390000000803 ENSGT00940000156485 ENSGT00940000155094 ENSGT00530000063023.B.o.a ENSGT00530000063023.B.o.b ENSGT00940000158741 ENSGT00390000017671.a ENSGT00940000154222.d.b.d.b ENSGT00390000009677 ENSGT00940000157165 Mus_A ANCESTRAL SPECIES 4 ENSGT00390000008201 ENSGT00940000158145 ENSGT00390000007170 ENSGT00940000160315 ENSGT00940000161935 ENSGT00940000153116.C.b ENSGT00510000047770.c.a ENSGT00940000160389 ENSGT00940000160257 ENSGT00390000005147 ENSGT00940000159680 ENSGT00390000000053.i ENSGT00390000016735 ENSGT00610000087446 ENSGT00940000164244.a ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a ##22 ENSGT00940000153505.a.a.c.a.a.a.a.b ##22 ENSGT00940000153505.a.a.c.a.a.a.b.a.b ##22 ENSGT00390000008749.e ENSGT00390000004417.a ENSGT00940000162896 ENSGT00390000000803 ENSGT00940000156485 ENSGT00940000155094 ENSGT00530000063023.B.o.a ENSGT00530000063023.B.o.b ENSGT00390000016779.b.a.b ENSGT00940000158741 ENSGT00390000017671.a ENSGT00940000154222.d.b.d.b ENSGT00390000009677 Ryukyu mouse MODERN SPECIES 18 Ccdc159 (MGP_CAROLIEiJ_G0031887) Plppr2 (MGP_CAROLIEiJ_G0031888) Swsap1 (MGP_CAROLIEiJ_G0031889) Epor (MGP_CAROLIEiJ_G0031890) Rgl3 (MGP_CAROLIEiJ_G0031891) Odad3 (MGP_CAROLIEiJ_G0031892) Prkcsh (MGP_CAROLIEiJ_G0031893) Elavl3 (MGP_CAROLIEiJ_G0031894) Zfp653 (MGP_CAROLIEiJ_G0031895) Ecsit (MGP_CAROLIEiJ_G0031896) Cnn1 (MGP_CAROLIEiJ_G0031897) Elof1 (MGP_CAROLIEiJ_G0031898) Acp5 (MGP_CAROLIEiJ_G0031899) Pigyl (MGP_CAROLIEiJ_G0031900) MGP_CAROLIEiJ_G0031901 Zfp809 (MGP_CAROLIEiJ_G0031902) ##22 Zfp599 (MGP_CAROLIEiJ_G0031903) ##22 Zfp810 (MGP_CAROLIEiJ_G0031904) ##22 MGP_CAROLIEiJ_G0031905 9530077C05Rik (MGP_CAROLIEiJ_G0031906) Rp9 (MGP_CAROLIEiJ_G0031907) MGP_CAROLIEiJ_G0031908 MGP_CAROLIEiJ_G0031909 Bmper (MGP_CAROLIEiJ_G0031910) Npsr1 (MGP_CAROLIEiJ_G0031911) Dpy19l1 (MGP_CAROLIEiJ_G0031912) Cypt4 (MGP_CAROLIEiJ_G0031913) MGP_CAROLIEiJ_G0031914 Tbx20 (MGP_CAROLIEiJ_G0031915) Herpud2 (MGP_CAROLIEiJ_G0031916) Septin7 (MGP_CAROLIEiJ_G0031917) Mus_B ANCESTRAL SPECIES 3 ENSGT00390000008201 ENSGT00940000158145 ENSGT00390000007170 ENSGT00940000160315 ENSGT00940000161935 ENSGT00940000153116.C.b ENSGT00510000047770.c.a ENSGT00940000160389 ENSGT00940000160257 ENSGT00390000005147 ENSGT00940000159680 ENSGT00390000000053.i ENSGT00390000016735 ENSGT00610000087446 ENSGT00940000164244.a ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a ##22 ENSGT00940000153505.a.a.c.a.a.a.a.b ##22 ENSGT00940000153505.a.a.c.a.a.a.b.a.b ##22 ENSGT00390000008749.e ENSGT00390000004417.a ENSGT00940000162896 ENSGT00390000000803 ENSGT00940000156485 ENSGT00940000155094 ENSGT00530000063023.B.o.a ENSGT00530000063023.B.o.b ENSGT00390000016779.b.a.b ENSGT00940000158741 ENSGT00390000017671.a ENSGT00940000154222.d.b.d.b ENSGT00390000009677 Mouse MODERN SPECIES 18 Ccdc159 (ENSMUSG00000006241) Plppr2 (ENSMUSG00000040563) Swsap1 (ENSMUSG00000051238) Epor (ENSMUSG00000006235) Rgl3 (ENSMUSG00000040146) Odad3 (ENSMUSG00000039632) Prkcsh (ENSMUSG00000003402) Elavl3 (ENSMUSG00000003410) Zfp653 (ENSMUSG00000038895) Ecsit (ENSMUSG00000066839) Cnn1 (ENSMUSG00000001349) Elof1 (ENSMUSG00000013822) Acp5 (ENSMUSG00000001348) Pigyl (ENSMUSG00000010607) Zfp872 (ENSMUSG00000074472) Zfp809 (ENSMUSG00000057982) ##22 Zfp599 (ENSMUSG00000062794) ##22 Zfp810 (ENSMUSG00000066829) ##22 Anln (ENSMUSG00000036777) Rp9 (ENSMUSG00000032239) 9530077C05Rik (ENSMUSG00000036411) Bbs9 (ENSMUSG00000035919) Bmper (ENSMUSG00000031963) Npsr1 (ENSMUSG00000043659) Dpy19l1 (ENSMUSG00000043067) Dpy19l2 (ENSMUSG00000085576) Cypt4 (ENSMUSG00000047995) Tbx20 (ENSMUSG00000031965) Herpud2 (ENSMUSG00000008429) Septin7 (ENSMUSG00000001833) Eepd1 (ENSMUSG00000036611) Mus_C ANCESTRAL SPECIES 8 ENSGT00390000008201 ENSGT00940000158145 ENSGT00390000007170 ENSGT00940000160315 ENSGT00940000161935 ENSGT00940000153116.C.b ENSGT00510000047770.c.a ENSGT00940000160389 ENSGT00940000160257 ENSGT00390000005147 ENSGT00940000159680 ENSGT00390000000053.i ENSGT00390000016735 ENSGT00610000087446 ENSGT00940000164244.a ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a ##22 ENSGT00940000153505.a.a.c.a.a.a.a.b ##22 ENSGT00940000153505.a.a.c.a.a.a.b.a.b ##22 ENSGT00390000008749.e ENSGT00390000004417.a ENSGT00940000162896 ENSGT00390000000803 ENSGT00940000156485 ENSGT00940000155094 ENSGT00530000063023.B.o.a ENSGT00530000063023.B.o.b ENSGT00390000016779.b.a.b ENSGT00940000158741 ENSGT00390000017671.a ENSGT00940000154222.d.b.d.b ENSGT00390000009677 Steppe mouse MODERN SPECIES 3067 Pigyl (ENSMSIG00000024448) ENSMSIG00000024490 Zfp872 (ENSMSIG00000024500) ENSMSIG00000024509 ENSMSIG00000024520 Zfp809 (ENSMSIG00000024525) ##22 Zfp599 (ENSMSIG00000024565) ##22 ENSMSIG00000024574 Zfp810 (ENSMSIG00000024582) ##22 ENSMSIG00000024615 Anln (ENSMSIG00000024620) ENSMSIG00000024696 Rp9 (ENSMSIG00000024723) Bbs9 (ENSMSIG00000024757) Bmper (ENSMSIG00000025060) spretus MODERN SPECIES 18 Tmem205 (MGP_SPRETEiJ_G0033010) Ccdc159 (MGP_SPRETEiJ_G0033011) Plppr2 (MGP_SPRETEiJ_G0033012) Epor (MGP_SPRETEiJ_G0033013) Rgl3 (MGP_SPRETEiJ_G0033014) Odad3 (MGP_SPRETEiJ_G0033015) Prkcsh (MGP_SPRETEiJ_G0033016) MGP_SPRETEiJ_G0033017 Zfp653 (MGP_SPRETEiJ_G0033018) Ecsit (MGP_SPRETEiJ_G0033019) Cnn1 (MGP_SPRETEiJ_G0033020) Elof1 (MGP_SPRETEiJ_G0033021) Acp5 (MGP_SPRETEiJ_G0033022) Pigyl (MGP_SPRETEiJ_G0033023) MGP_SPRETEiJ_G0033024 Zfp809 (MGP_SPRETEiJ_G0033025) ##22 Zfp599 (MGP_SPRETEiJ_G0033026) ##22 Zfp810 (MGP_SPRETEiJ_G0033027) ##22 Anln (MGP_SPRETEiJ_G0033028) 9530077C05Rik (MGP_SPRETEiJ_G0033029) Rp9 (MGP_SPRETEiJ_G0033030) MGP_SPRETEiJ_G0033031 Bbs9 (MGP_SPRETEiJ_G0033032) Bmper (MGP_SPRETEiJ_G0033033) Npsr1 (MGP_SPRETEiJ_G0033034) Dpy19l1 (MGP_SPRETEiJ_G0033035) Dpy19l2 (MGP_SPRETEiJ_G0033036) Cypt4 (MGP_SPRETEiJ_G0033037) Tbx20 (MGP_SPRETEiJ_G0033038) Herpud2 (MGP_SPRETEiJ_G0033039) Septin7 (MGP_SPRETEiJ_G0033040) Shrew mouse MODERN SPECIES 1 Ccdc159 (MGP_PahariEiJ_G0014753) Plppr2 (MGP_PahariEiJ_G0014754) Swsap1 (MGP_PahariEiJ_G0014755) Epor (MGP_PahariEiJ_G0014756) Rgl3 (MGP_PahariEiJ_G0014757) Odad3 (MGP_PahariEiJ_G0014758) Prkcsh (MGP_PahariEiJ_G0014759) Elavl3 (MGP_PahariEiJ_G0014760) Zfp653 (MGP_PahariEiJ_G0014761) Ecsit (MGP_PahariEiJ_G0014762) Cnn1 (MGP_PahariEiJ_G0014763) Elof1 (MGP_PahariEiJ_G0014764) Acp5 (MGP_PahariEiJ_G0014765) Pigyl (MGP_PahariEiJ_G0014766) MGP_PahariEiJ_G0014767 Zfp809 (MGP_PahariEiJ_G0014768) ##22 Zfp599 (MGP_PahariEiJ_G0014769) ##22 Zfp810 (MGP_PahariEiJ_G0014770) ##22 Anln (MGP_PahariEiJ_G0014771) 9530077C05Rik (MGP_PahariEiJ_G0014772) Rp9 (MGP_PahariEiJ_G0014773) Bbs9 (MGP_PahariEiJ_G0014774) Bmper (MGP_PahariEiJ_G0014775) Npsr1 (MGP_PahariEiJ_G0014776) Dpy19l1 (MGP_PahariEiJ_G0014777) Dpy19l2 (MGP_PahariEiJ_G0014778) Tbx20 (MGP_PahariEiJ_G0014779) MGP_PahariEiJ_G0014780 Herpud2 (MGP_PahariEiJ_G0014781) Septin7 (MGP_PahariEiJ_G0014782) Eepd1 (MGP_PahariEiJ_G0014783) Cricetidae ANCESTRAL SPECIES ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a ##22 Cricetinae ANCESTRAL SPECIES ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a ##22 Chinese hamster chok1gshd MODERN SPECIES 189 Tmem205 (ENSCGRG00001022126) Ccdc159 (ENSCGRG00001023310) Plppr2 (ENSCGRG00001018956) Swsap1 (ENSCGRG00001003241) Epor (ENSCGRG00001009147) Rgl3 (ENSCGRG00001012320) Odad3 (ENSCGRG00001017980) Prkcsh (ENSCGRG00001022593) Elavl3 (ENSCGRG00001018927) Zfp653 (ENSCGRG00001012039) Ecsit (ENSCGRG00001016909) Cnn1 (ENSCGRG00001021689) ENSCGRG00001013425 Acp5 (ENSCGRG00001020275) Pigyl (ENSCGRG00001000847) Zfp809 (ENSCGRG00001001284) ##22 Zfp810 (ENSCGRG00001007369) ##22 Anln (ENSCGRG00001013117) 9530077C05Rik (ENSCGRG00001011224) Rp9 (ENSCGRG00001013075) Bbs9 (ENSCGRG00001023803) Bmper (ENSCGRG00001024435) Npsr1 (ENSCGRG00001018798) Dpy19l1 (ENSCGRG00001005835) Dpy19l2 (ENSCGRG00001010486) Tbx20 (ENSCGRG00001021722) Herpud2 (ENSCGRG00001007091) ENSCGRG00001021280 ENSCGRG00001005335 ENSCGRG00001010216 Eepd1 (ENSCGRG00001024478) Upper Galilee mountains blind mole rat MODERN SPECIES 944 Or7d9 (ENSNGAG00000012463) ENSNGAG00000011101 ENSNGAG00000010842 Zfp810 (ENSNGAG00000009375) ##22 Zfp809 (ENSNGAG00000000057) ##22