Muroidea	DUPLICATION
Muroidea	ANCESTRAL SPECIES																	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a #22
Muroidea_A	ANCESTRAL SPECIES																	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a #22
Murinae	ANCESTRAL SPECIES																	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a #22
Mus	ANCESTRAL SPECIES	4	ENSGT00390000008201 #7	ENSGT00940000158145 #8	ENSGT00390000007170 #9	ENSGT00940000160315 #10	ENSGT00940000161935 #11	ENSGT00940000153116.C.b #12	ENSGT00510000047770.c.a #13	ENSGT00940000160389 #14	ENSGT00940000160257 #15	ENSGT00390000005147 #16	ENSGT00940000159680 #17	ENSGT00390000000053 #18	ENSGT00390000016735 #19	ENSGT00610000087446 #20	ENSGT00940000164244.a #21	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a #22	ENSGT00940000153505.a.a.c.a.a.a.a.b #23	ENSGT00940000153505.a.a.c.a.a.a.b.a.b #24	ENSGT00390000008749.e #25	ENSGT00390000004417.a #26	ENSGT00940000162896 #27	ENSGT00390000000803 #28	ENSGT00940000156485 #29	ENSGT00940000155094 #30	ENSGT00530000063023.B.o.a #31	ENSGT00530000063023.B.o.b #32	ENSGT00940000158741 #33	ENSGT00390000017671.a #34	ENSGT00940000154222.d.b.d.b #35	ENSGT00390000009677 #36	ENSGT00940000157165 #37
Mus_A	ANCESTRAL SPECIES	4	ENSGT00390000008201 #7	ENSGT00940000158145 #8	ENSGT00390000007170 #9	ENSGT00940000160315 #10	ENSGT00940000161935 #11	ENSGT00940000153116.C.b #12	ENSGT00510000047770.c.a #13	ENSGT00940000160389 #14	ENSGT00940000160257 #15	ENSGT00390000005147 #16	ENSGT00940000159680 #17	ENSGT00390000000053.i #18	ENSGT00390000016735 #19	ENSGT00610000087446 #20	ENSGT00940000164244.a #21	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a #22	ENSGT00940000153505.a.a.c.a.a.a.a.b #23	ENSGT00940000153505.a.a.c.a.a.a.b.a.b #24	ENSGT00390000008749.e #25	ENSGT00390000004417.a #26	ENSGT00940000162896 #27	ENSGT00390000000803 #28	ENSGT00940000156485 #29	ENSGT00940000155094 #30	ENSGT00530000063023.B.o.a #31	ENSGT00530000063023.B.o.b #32	ENSGT00390000016779.b.a.b	ENSGT00940000158741 #33	ENSGT00390000017671.a #34	ENSGT00940000154222.d.b.d.b #35	ENSGT00390000009677 #36
Ryukyu mouse	MODERN SPECIES	18	Ccdc159 (MGP_CAROLIEiJ_G0031887) #7	Plppr2 (MGP_CAROLIEiJ_G0031888) #8	Swsap1 (MGP_CAROLIEiJ_G0031889) #9	Epor (MGP_CAROLIEiJ_G0031890) #10	Rgl3 (MGP_CAROLIEiJ_G0031891) #11	Odad3 (MGP_CAROLIEiJ_G0031892) #12	Prkcsh (MGP_CAROLIEiJ_G0031893) #13	Elavl3 (MGP_CAROLIEiJ_G0031894) #14	Zfp653 (MGP_CAROLIEiJ_G0031895) #15	Ecsit (MGP_CAROLIEiJ_G0031896) #16	Cnn1 (MGP_CAROLIEiJ_G0031897) #17	Elof1 (MGP_CAROLIEiJ_G0031898) #18	Acp5 (MGP_CAROLIEiJ_G0031899) #19	Pigyl (MGP_CAROLIEiJ_G0031900) #20	MGP_CAROLIEiJ_G0031901	Zfp809 (MGP_CAROLIEiJ_G0031902) #22	Zfp599 (MGP_CAROLIEiJ_G0031903) #23	Zfp810 (MGP_CAROLIEiJ_G0031904) #24	MGP_CAROLIEiJ_G0031905 #25	9530077C05Rik (MGP_CAROLIEiJ_G0031906) #26	Rp9 (MGP_CAROLIEiJ_G0031907) #27	MGP_CAROLIEiJ_G0031908	MGP_CAROLIEiJ_G0031909 #28	Bmper (MGP_CAROLIEiJ_G0031910) #29	Npsr1 (MGP_CAROLIEiJ_G0031911) #30	Dpy19l1 (MGP_CAROLIEiJ_G0031912) #31	Cypt4 (MGP_CAROLIEiJ_G0031913)	MGP_CAROLIEiJ_G0031914 #32	Tbx20 (MGP_CAROLIEiJ_G0031915) #33	Herpud2 (MGP_CAROLIEiJ_G0031916) #34	Septin7 (MGP_CAROLIEiJ_G0031917) #35
Mus_B	ANCESTRAL SPECIES	3	ENSGT00390000008201 #7	ENSGT00940000158145 #8	ENSGT00390000007170 #9	ENSGT00940000160315 #10	ENSGT00940000161935 #11	ENSGT00940000153116.C.b #12	ENSGT00510000047770.c.a #13	ENSGT00940000160389 #14	ENSGT00940000160257 #15	ENSGT00390000005147 #16	ENSGT00940000159680 #17	ENSGT00390000000053.i #18	ENSGT00390000016735 #19	ENSGT00610000087446 #20	ENSGT00940000164244.a #21	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a #22	ENSGT00940000153505.a.a.c.a.a.a.a.b #23	ENSGT00940000153505.a.a.c.a.a.a.b.a.b #24	ENSGT00390000008749.e #25	ENSGT00390000004417.a #26	ENSGT00940000162896 #27	ENSGT00390000000803 #28	ENSGT00940000156485 #29	ENSGT00940000155094 #30	ENSGT00530000063023.B.o.a #31	ENSGT00530000063023.B.o.b #32	ENSGT00390000016779.b.a.b	ENSGT00940000158741 #33	ENSGT00390000017671.a #34	ENSGT00940000154222.d.b.d.b #35	ENSGT00390000009677 #36
Mouse	MODERN SPECIES	18	Ccdc159 (ENSMUSG00000006241) #7	Plppr2 (ENSMUSG00000040563) #8	Swsap1 (ENSMUSG00000051238) #9	Epor (ENSMUSG00000006235) #10	Rgl3 (ENSMUSG00000040146) #11	Odad3 (ENSMUSG00000039632) #12	Prkcsh (ENSMUSG00000003402) #13	Elavl3 (ENSMUSG00000003410) #14	Zfp653 (ENSMUSG00000038895) #15	Ecsit (ENSMUSG00000066839) #16	Cnn1 (ENSMUSG00000001349) #17	Elof1 (ENSMUSG00000013822) #18	Acp5 (ENSMUSG00000001348) #19	Pigyl (ENSMUSG00000010607) #20	Zfp872 (ENSMUSG00000074472) #21	Zfp809 (ENSMUSG00000057982) #22	Zfp599 (ENSMUSG00000062794) #23	Zfp810 (ENSMUSG00000066829) #24	Anln (ENSMUSG00000036777) #25	Rp9 (ENSMUSG00000032239) #27	9530077C05Rik (ENSMUSG00000036411) #26	Bbs9 (ENSMUSG00000035919) #28	Bmper (ENSMUSG00000031963) #29	Npsr1 (ENSMUSG00000043659) #30	Dpy19l1 (ENSMUSG00000043067) #31	Dpy19l2 (ENSMUSG00000085576) #32	Cypt4 (ENSMUSG00000047995)	Tbx20 (ENSMUSG00000031965) #33	Herpud2 (ENSMUSG00000008429) #34	Septin7 (ENSMUSG00000001833) #35	Eepd1 (ENSMUSG00000036611) #36
Mus_C	ANCESTRAL SPECIES	8	ENSGT00390000008201 #7	ENSGT00940000158145 #8	ENSGT00390000007170 #9	ENSGT00940000160315 #10	ENSGT00940000161935 #11	ENSGT00940000153116.C.b #12	ENSGT00510000047770.c.a #13	ENSGT00940000160389 #14	ENSGT00940000160257 #15	ENSGT00390000005147 #16	ENSGT00940000159680 #17	ENSGT00390000000053.i #18	ENSGT00390000016735 #19	ENSGT00610000087446 #20	ENSGT00940000164244.a #21	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a #22	ENSGT00940000153505.a.a.c.a.a.a.a.b #23	ENSGT00940000153505.a.a.c.a.a.a.b.a.b #24	ENSGT00390000008749.e #25	ENSGT00390000004417.a #26	ENSGT00940000162896 #27	ENSGT00390000000803 #28	ENSGT00940000156485 #29	ENSGT00940000155094 #30	ENSGT00530000063023.B.o.a #31	ENSGT00530000063023.B.o.b #32	ENSGT00390000016779.b.a.b	ENSGT00940000158741 #33	ENSGT00390000017671.a #34	ENSGT00940000154222.d.b.d.b #35	ENSGT00390000009677 #36
Steppe mouse	MODERN SPECIES	3067											Pigyl (ENSMSIG00000024448) #20	ENSMSIG00000024490	Zfp872 (ENSMSIG00000024500) #21	ENSMSIG00000024509	ENSMSIG00000024520	Zfp809 (ENSMSIG00000024525) #22	Zfp599 (ENSMSIG00000024565) #23	ENSMSIG00000024574	Zfp810 (ENSMSIG00000024582) #24	ENSMSIG00000024615	Anln (ENSMSIG00000024620) #25	ENSMSIG00000024696 #26	Rp9 (ENSMSIG00000024723) #27	Bbs9 (ENSMSIG00000024757) #28	Bmper (ENSMSIG00000025060) #29
spretus	MODERN SPECIES	18	Tmem205 (MGP_SPRETEiJ_G0033010)	Ccdc159 (MGP_SPRETEiJ_G0033011) #7	Plppr2 (MGP_SPRETEiJ_G0033012) #8	Epor (MGP_SPRETEiJ_G0033013) #10	Rgl3 (MGP_SPRETEiJ_G0033014) #11	Odad3 (MGP_SPRETEiJ_G0033015) #12	Prkcsh (MGP_SPRETEiJ_G0033016) #13	MGP_SPRETEiJ_G0033017 #14	Zfp653 (MGP_SPRETEiJ_G0033018) #15	Ecsit (MGP_SPRETEiJ_G0033019) #16	Cnn1 (MGP_SPRETEiJ_G0033020) #17	Elof1 (MGP_SPRETEiJ_G0033021) #18	Acp5 (MGP_SPRETEiJ_G0033022) #19	Pigyl (MGP_SPRETEiJ_G0033023) #20	MGP_SPRETEiJ_G0033024 #21	Zfp809 (MGP_SPRETEiJ_G0033025) #22	Zfp599 (MGP_SPRETEiJ_G0033026) #23	Zfp810 (MGP_SPRETEiJ_G0033027) #24	Anln (MGP_SPRETEiJ_G0033028) #25	9530077C05Rik (MGP_SPRETEiJ_G0033029) #26	Rp9 (MGP_SPRETEiJ_G0033030) #27	MGP_SPRETEiJ_G0033031	Bbs9 (MGP_SPRETEiJ_G0033032) #28	Bmper (MGP_SPRETEiJ_G0033033) #29	Npsr1 (MGP_SPRETEiJ_G0033034) #30	Dpy19l1 (MGP_SPRETEiJ_G0033035) #31	Dpy19l2 (MGP_SPRETEiJ_G0033036) #32	Cypt4 (MGP_SPRETEiJ_G0033037)	Tbx20 (MGP_SPRETEiJ_G0033038) #33	Herpud2 (MGP_SPRETEiJ_G0033039) #34	Septin7 (MGP_SPRETEiJ_G0033040) #35
Shrew mouse	MODERN SPECIES	1	Ccdc159 (MGP_PahariEiJ_G0014753) #7	Plppr2 (MGP_PahariEiJ_G0014754) #8	Swsap1 (MGP_PahariEiJ_G0014755) #9	Epor (MGP_PahariEiJ_G0014756) #10	Rgl3 (MGP_PahariEiJ_G0014757) #11	Odad3 (MGP_PahariEiJ_G0014758) #12	Prkcsh (MGP_PahariEiJ_G0014759) #13	Elavl3 (MGP_PahariEiJ_G0014760) #14	Zfp653 (MGP_PahariEiJ_G0014761) #15	Ecsit (MGP_PahariEiJ_G0014762) #16	Cnn1 (MGP_PahariEiJ_G0014763) #17	Elof1 (MGP_PahariEiJ_G0014764) #18	Acp5 (MGP_PahariEiJ_G0014765) #19	Pigyl (MGP_PahariEiJ_G0014766) #20	MGP_PahariEiJ_G0014767 #21	Zfp809 (MGP_PahariEiJ_G0014768) #22	Zfp599 (MGP_PahariEiJ_G0014769) #23	Zfp810 (MGP_PahariEiJ_G0014770) #24	Anln (MGP_PahariEiJ_G0014771) #25	9530077C05Rik (MGP_PahariEiJ_G0014772) #26	Rp9 (MGP_PahariEiJ_G0014773) #27	Bbs9 (MGP_PahariEiJ_G0014774) #28	Bmper (MGP_PahariEiJ_G0014775) #29	Npsr1 (MGP_PahariEiJ_G0014776) #30	Dpy19l1 (MGP_PahariEiJ_G0014777) #31	Dpy19l2 (MGP_PahariEiJ_G0014778) #32	Tbx20 (MGP_PahariEiJ_G0014779) #33	MGP_PahariEiJ_G0014780	Herpud2 (MGP_PahariEiJ_G0014781) #34	Septin7 (MGP_PahariEiJ_G0014782) #35	Eepd1 (MGP_PahariEiJ_G0014783) #36
Cricetidae	ANCESTRAL SPECIES																	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a #22
Cricetinae	ANCESTRAL SPECIES																	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.a #22
Chinese hamster chok1gshd	MODERN SPECIES	189	Tmem205 (ENSCGRG00001022126)	Ccdc159 (ENSCGRG00001023310) #7	Plppr2 (ENSCGRG00001018956) #8	Swsap1 (ENSCGRG00001003241) #9	Epor (ENSCGRG00001009147) #10	Rgl3 (ENSCGRG00001012320) #11	Odad3 (ENSCGRG00001017980) #12	Prkcsh (ENSCGRG00001022593) #13	Elavl3 (ENSCGRG00001018927) #14	Zfp653 (ENSCGRG00001012039) #15	Ecsit (ENSCGRG00001016909) #16	Cnn1 (ENSCGRG00001021689) #17	ENSCGRG00001013425 #18	Acp5 (ENSCGRG00001020275) #19	Pigyl (ENSCGRG00001000847) #20	Zfp809 (ENSCGRG00001001284) #22	Zfp810 (ENSCGRG00001007369) #24	Anln (ENSCGRG00001013117) #25	9530077C05Rik (ENSCGRG00001011224) #26	Rp9 (ENSCGRG00001013075) #27	Bbs9 (ENSCGRG00001023803) #28	Bmper (ENSCGRG00001024435) #29	Npsr1 (ENSCGRG00001018798) #30	Dpy19l1 (ENSCGRG00001005835) #31	Dpy19l2 (ENSCGRG00001010486) #32	Tbx20 (ENSCGRG00001021722) #33	Herpud2 (ENSCGRG00001007091) #34	ENSCGRG00001021280	ENSCGRG00001005335 #35	ENSCGRG00001010216	Eepd1 (ENSCGRG00001024478) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	944												Or7d9 (ENSNGAG00000012463)	ENSNGAG00000011101	ENSNGAG00000010842	Zfp810 (ENSNGAG00000009375) #24	Zfp809 (ENSNGAG00000000057) #22
Muroidea	ANCESTRAL SPECIES																	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b ##24
Muroidea_A	ANCESTRAL SPECIES	25	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000162161.A	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00900000143418	ENSGT00940000155885	ENSGT00950000183069.b.b.a.a.e.b.b	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b ##24	ENSGT00940000163952.b	ENSGT00940000163952.a	ENSGT00940000153523.b.a	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00950000183216.d.j.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00940000160234
Cricetidae	ANCESTRAL SPECIES	25	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000162161.A	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00900000143418	ENSGT00940000155885	ENSGT00950000183069.b.b.a.a.e.b.b	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b ##24	ENSGT00940000163952.b	ENSGT00940000163952.a	ENSGT00940000153523.b.a	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00940000160234	ENSGT00800000125293
Cricetidae_B	ANCESTRAL SPECIES	57															ENSGT00950000183069.b.b.a.a.e.b.b	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b ##24	ENSGT00940000163952.b	ENSGT00940000163952.a	ENSGT00940000153523.b.a	ENSGT00940000153523.b.b	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00940000160234	ENSGT00800000125293	ENSGT00940000162086	ENSGT00940000154549.b
Northern American deer mouse	MODERN SPECIES	14	Tubb4a (ENSPEMG00000028633)	Tnfsf9 (ENSPEMG00000020989)	Cd70 (ENSPEMG00000015587)	ENSPEMG00000011159	ENSPEMG00000015087	Tnfsf14 (ENSPEMG00000000292)	ENSPEMG00000001526	Gpr108 (ENSPEMG00000030315)	Trip10 (ENSPEMG00000017394)	ENSPEMG00000031058	Vav1 (ENSPEMG00000015943)	Adgre1 (ENSPEMG00000013357)	ENSPEMG00000008525	ENSPEMG00000028855	ENSPEMG00000030002	2610008E11Rik (ENSPEMG00000029764) ##24	ENSPEMG00000008518	ENSPEMG00000008828	Or7a36 (ENSPEMG00000011041)	ENSPEMG00000009495	ENSPEMG00000015450	Ccdc105 (ENSPEMG00000008931)	Casp14 (ENSPEMG00000003806)	Or1i2 (ENSPEMG00000002732)	Syde1 (ENSPEMG00000017967)	Ilvbl (ENSPEMG00000016636)	Or10b1 (ENSPEMG00000031391)	Notch3 (ENSPEMG00000003368)	ENSPEMG00000026978	Ephx3 (ENSPEMG00000001114)	Brd4 (ENSPEMG00000015342)
Prairie vole	MODERN SPECIES	353	Pkdcc (ENSMOCG00000002662)	Eml4 (ENSMOCG00000020764)	Cox7a2l (ENSMOCG00000012418)	Kcng3 (ENSMOCG00000011778)	Mta3 (ENSMOCG00000017936)	Haao (ENSMOCG00000015453)	Zfp36l2 (ENSMOCG00000011066)	ENSMOCG00000021185	ENSMOCG00000014683	ENSMOCG00000011429	ENSMOCG00000011467	ENSMOCG00000007015	ENSMOCG00000021154	ENSMOCG00000020687	ENSMOCG00000017805	2610008E11Rik (ENSMOCG00000008949) ##24	ENSMOCG00000008222	Or7a36 (ENSMOCG00000002619)	Slc1a6 (ENSMOCG00000020405)	Ccdc105 (ENSMOCG00000013529)	Casp14 (ENSMOCG00000013844)	Syde1 (ENSMOCG00000010233)	Ilvbl (ENSMOCG00000007265)	Notch3 (ENSMOCG00000001344)	Ephx3 (ENSMOCG00000016735)	Brd4 (ENSMOCG00000019710)	Akap8 (ENSMOCG00000001588)	Akap8l (ENSMOCG00000017098)	Wiz (ENSMOCG00000004182)	Rasal3 (ENSMOCG00000000323)	Pglyrp2 (ENSMOCG00000012093)
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000162161.A	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00900000143418	ENSGT00940000155885	ENSGT00950000183069.b.b.a.a.e.b.b	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b ##24	ENSGT00940000163952.b	ENSGT00940000163952.a	ENSGT00940000153523.b.a	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000160234	ENSGT00940000162086	ENSGT00940000154549.b
Golden Hamster	MODERN SPECIES	764	ENSMAUG00000020560	Tpgs1 (ENSMAUG00000001840)	Madcam1 (ENSMAUG00000021497)	Odf3l2 (ENSMAUG00000010358)	Shc2 (ENSMAUG00000007720)	C2cd4c (ENSMAUG00000015978)	ENSMAUG00000013218	Theg (ENSMAUG00000005159)	ENSMAUG00000008189	ENSMAUG00000005384	Plpp2 (ENSMAUG00000009359)	ENSMAUG00000013541	ENSMAUG00000009575	ENSMAUG00000020592	ENSMAUG00000008319	2610008E11Rik (ENSMAUG00000007597) ##24	ENSMAUG00000011922	Or7a37 (ENSMAUG00000018329)	Slc1a6 (ENSMAUG00000010823)	Ccdc105 (ENSMAUG00000015800)	Casp14 (ENSMAUG00000015211)	Syde1 (ENSMAUG00000010021)	Ilvbl (ENSMAUG00000015514)	Notch3 (ENSMAUG00000021946)	Ephx3 (ENSMAUG00000010068)	Brd4 (ENSMAUG00000019036)	Akap8 (ENSMAUG00000021975)	Akap8l (ENSMAUG00000021519)	ENSMAUG00000020479	Rasal3 (ENSMAUG00000010568)	Pglyrp2 (ENSMAUG00000013267)
Chinese hamster chok1gshd	MODERN SPECIES	2	Polrmt (ENSCGRG00001021311)	Hcn2 (ENSCGRG00001023674)	Bsg (ENSCGRG00001018157)	Gzmm (ENSCGRG00001016920)	ENSCGRG00001018767	Tpgs1 (ENSCGRG00001018429)	Madcam1 (ENSCGRG00001017494)	Odf3l2 (ENSCGRG00001016570)	Shc2 (ENSCGRG00001014392)	C2cd4c (ENSCGRG00001010202)	Theg (ENSCGRG00001019545)	ENSCGRG00001016569	Mier2 (ENSCGRG00001014133)	Plpp2 (ENSCGRG00001000586)	ENSCGRG00001023576	2610008E11Rik (ENSCGRG00001010752) ##24	ENSCGRG00001008499	ENSCGRG00001007761	ENSCGRG00001009644	Or7a36 (ENSCGRG00001006807)	Or7a37 (ENSCGRG00001024013)	ENSCGRG00001010046	ENSCGRG00001000829	Or7c70 (ENSCGRG00001007644)	Slc1a6 (ENSCGRG00001015926)	Ccdc105 (ENSCGRG00001014217)	Casp14 (ENSCGRG00001015488)	Or1i2 (ENSCGRG00001010185)	Syde1 (ENSCGRG00001005250)	Ilvbl (ENSCGRG00001003112)	ENSCGRG00001001082
Murinae	ANCESTRAL SPECIES	25	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000162161.A	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00900000143418	ENSGT00940000155885	ENSGT00950000183069.b.b.a.a.e.b.b	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b ##24	ENSGT00940000163952.b	ENSGT00940000163952.a.c	ENSGT00940000163952.a.d	ENSGT00940000153523.b.a	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00950000183216.d.j.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b
Mus	ANCESTRAL SPECIES	15	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000162161.A	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT00950000183069.b.b.a.a.e.b.b.c	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b ##24	ENSGT00940000163952.a.c	ENSGT00940000163952.a.d	ENSGT00940000153523.b.a	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00950000183216.d.j.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00390000003874
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000162161.A	ENSGT00940000160356.k	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT00950000183069.b.b.a.a.e.b.b.c	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b ##24	ENSGT00940000163952.a.c	ENSGT00940000163952.a.d	ENSGT00940000153523.b.a	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00950000183216.d.j.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00390000003874
Mus_B	ANCESTRAL SPECIES	10	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000162161.A	ENSGT00940000160356.k	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT00950000183069.b.b.a.a.e.b.b.d	ENSGT00950000183069.b.b.a.a.e.b.b.c.a.b	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b ##24	ENSGT00940000163952.a.c	ENSGT00940000163952.a.d	ENSGT00940000153523.b.a	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00950000183216.d.j.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00390000003874
Mouse	MODERN SPECIES	1	Bsg (ENSMUSG00000023175)	Gzmm (ENSMUSG00000054206)	Cdc34 (ENSMUSG00000020307)	Tpgs1 (ENSMUSG00000020308)	Madcam1 (ENSMUSG00000020310)	Odf3l2 (ENSMUSG00000035963)	Shc2 (ENSMUSG00000020312)	C2cd4c (ENSMUSG00000045912)	Theg (ENSMUSG00000020317)	Mier2 (ENSMUSG00000042570)	Plpp2 (ENSMUSG00000052151)	Vmn2r83 (ENSMUSG00000091381)	Vmn2r82 (ENSMUSG00000091468)	Vmn2r81 (ENSMUSG00000055515)	Vmn2r80 (ENSMUSG00000091888)	2610008E11Rik (ENSMUSG00000060301) ##24	Or7a41 (ENSMUSG00000060205)	Or7a35 (ENSMUSG00000063216)	Or7a36 (ENSMUSG00000046493)	Or7a37 (ENSMUSG00000042774)	Or7a42 (ENSMUSG00000094080)	Or7a38 (ENSMUSG00000094673)	Or7a39 (ENSMUSG00000062873)	Or7c70 (ENSMUSG00000051190)	Slc1a6 (ENSMUSG00000005357)	Ccdc105 (ENSMUSG00000078442)	Casp14 (ENSMUSG00000005355)	Or1i2 (ENSMUSG00000071185)	Syde1 (ENSMUSG00000032714)	Ilvbl (ENSMUSG00000032763)	Or10b1 (ENSMUSG00000107822)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000162161.A	ENSGT00940000160356.k	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT00950000183069.b.b.a.a.e.b.b.d	ENSGT00950000183069.b.b.a.a.e.b.b.c.a.b	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b ##24	ENSGT00940000163952.a.c	ENSGT00940000163952.a.d	ENSGT00940000153523.b.a	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00390000003874	ENSGT00940000154826
spretus	MODERN SPECIES	1	Bsg (MGP_SPRETEiJ_G0016354)	Gzmm (MGP_SPRETEiJ_G0016353)	Cdc34 (MGP_SPRETEiJ_G0016352)	Tpgs1 (MGP_SPRETEiJ_G0016351)	Madcam1 (MGP_SPRETEiJ_G0016350)	Odf3l2 (MGP_SPRETEiJ_G0016349)	Shc2 (MGP_SPRETEiJ_G0016348)	C2cd4c (MGP_SPRETEiJ_G0016347)	Theg (MGP_SPRETEiJ_G0016346)	Mier2 (MGP_SPRETEiJ_G0016345)	Plpp2 (MGP_SPRETEiJ_G0016344)	Vmn2r83 (MGP_SPRETEiJ_G0016343)	MGP_SPRETEiJ_G0016342	MGP_SPRETEiJ_G0016341	MGP_SPRETEiJ_G0016340	2610008E11Rik (MGP_SPRETEiJ_G0016339) ##24	Or7a41 (MGP_SPRETEiJ_G0016338)	MGP_SPRETEiJ_G0016337	Or7a36 (MGP_SPRETEiJ_G0016336)	Or7a37 (MGP_SPRETEiJ_G0016335)	Or7a39 (MGP_SPRETEiJ_G0016334)	MGP_SPRETEiJ_G0016332	MGP_SPRETEiJ_G0016333	Or7c70 (MGP_SPRETEiJ_G0016331)	Slc1a6 (MGP_SPRETEiJ_G0016330)	Ccdc105 (MGP_SPRETEiJ_G0016329)	Casp14 (MGP_SPRETEiJ_G0016328)	Or1i2 (MGP_SPRETEiJ_G0016327)	Syde1 (MGP_SPRETEiJ_G0016326)	Ilvbl (MGP_SPRETEiJ_G0016325)	MGP_SPRETEiJ_G0016324
Steppe mouse	MODERN SPECIES	3068	Polrmt (ENSMSIG00000001360)	Hcn2 (ENSMSIG00000001317)	Bsg (ENSMSIG00000001246)	Gzmm (ENSMSIG00000001207)	Cdc34 (ENSMSIG00000001145)	Tpgs1 (ENSMSIG00000001133)	Madcam1 (ENSMSIG00000001087)	Odf3l2 (ENSMSIG00000001068)	Shc2 (ENSMSIG00000001015)	C2cd4c (ENSMSIG00000000990)	Theg (ENSMSIG00000000944)	Mier2 (ENSMSIG00000000839)	Plpp2 (ENSMSIG00000000794)	Vmn2r83 (ENSMSIG00000000740)	Vmn2r81 (ENSMSIG00000000704)	2610008E11Rik (ENSMSIG00000000653) ##24	Or7a41 (ENSMSIG00000000636)	Or7a35 (ENSMSIG00000000621)	Or7a36 (ENSMSIG00000000611)	Or7a37 (ENSMSIG00000000592)	ENSMSIG00000000580	Or7c70 (ENSMSIG00000000575)	Slc1a6 (ENSMSIG00000000543)	Ccdc105 (ENSMSIG00000000509)	Casp14 (ENSMSIG00000000458)	ENSMSIG00000000436	Or1i2 (ENSMSIG00000000403)	Syde1 (ENSMSIG00000000382)	Ilvbl (ENSMSIG00000000223)	Or10b1 (ENSMSIG00000000154)	Pdxk (ENSMSIG00000000114)
Ryukyu mouse	MODERN SPECIES	1	Rnf126 (MGP_CAROLIEiJ_G0015540)	MGP_CAROLIEiJ_G0015539	Polrmt (MGP_CAROLIEiJ_G0015538)	Hcn2 (MGP_CAROLIEiJ_G0015537)	Bsg (MGP_CAROLIEiJ_G0015536)	MGP_CAROLIEiJ_G0015535	Cdc34 (MGP_CAROLIEiJ_G0015534)	Tpgs1 (MGP_CAROLIEiJ_G0015533)	Madcam1 (MGP_CAROLIEiJ_G0015532)	Odf3l2 (MGP_CAROLIEiJ_G0015531)	Shc2 (MGP_CAROLIEiJ_G0015530)	C2cd4c (MGP_CAROLIEiJ_G0015529)	Theg (MGP_CAROLIEiJ_G0015528)	Mier2 (MGP_CAROLIEiJ_G0015527)	Plpp2 (MGP_CAROLIEiJ_G0015526)	2610008E11Rik (MGP_CAROLIEiJ_G0015525) ##24	Or7a41 (MGP_CAROLIEiJ_G0015524)	Or7a35 (MGP_CAROLIEiJ_G0015523)	Or7a36 (MGP_CAROLIEiJ_G0015522)	Or7a37 (MGP_CAROLIEiJ_G0015521)	MGP_CAROLIEiJ_G0015519	Or7a39 (MGP_CAROLIEiJ_G0015520)	Or7c70 (MGP_CAROLIEiJ_G0015518)	Slc1a6 (MGP_CAROLIEiJ_G0015517)	Ccdc105 (MGP_CAROLIEiJ_G0015516)	Casp14 (MGP_CAROLIEiJ_G0015515)	Or1i2 (MGP_CAROLIEiJ_G0015514)	Syde1 (MGP_CAROLIEiJ_G0015513)	Ilvbl (MGP_CAROLIEiJ_G0015512)	MGP_CAROLIEiJ_G0015511	Pdxk (MGP_CAROLIEiJ_G0015510)
Shrew mouse	MODERN SPECIES	22	Polrmt (MGP_PahariEiJ_G0030951)	Hcn2 (MGP_PahariEiJ_G0030950)	Bsg (MGP_PahariEiJ_G0030949)	Gzmm (MGP_PahariEiJ_G0030948)	MGP_PahariEiJ_G0030947	Tpgs1 (MGP_PahariEiJ_G0030946)	Madcam1 (MGP_PahariEiJ_G0030945)	Odf3l2 (MGP_PahariEiJ_G0030944)	Shc2 (MGP_PahariEiJ_G0030943)	C2cd4c (MGP_PahariEiJ_G0030942)	Theg (MGP_PahariEiJ_G0030941)	Mier2 (MGP_PahariEiJ_G0030940)	Plpp2 (MGP_PahariEiJ_G0030939)	MGP_PahariEiJ_G0030937	MGP_PahariEiJ_G0030938	2610008E11Rik (MGP_PahariEiJ_G0030936) ##24	Or7a36 (MGP_PahariEiJ_G0030935)	Or7a37 (MGP_PahariEiJ_G0030934)	MGP_PahariEiJ_G0030932	Or7a39 (MGP_PahariEiJ_G0030933)	Or7c70 (MGP_PahariEiJ_G0030931)	MGP_PahariEiJ_G0030930	Slc1a6 (MGP_PahariEiJ_G0030929)	Ccdc105 (MGP_PahariEiJ_G0030928)	Casp14 (MGP_PahariEiJ_G0030927)	Or1i2 (MGP_PahariEiJ_G0030926)	Syde1 (MGP_PahariEiJ_G0030925)	Ilvbl (MGP_PahariEiJ_G0030924)	Pdxk (MGP_PahariEiJ_G0030923)	Cstb (MGP_PahariEiJ_G0030922)	Rrp1 (MGP_PahariEiJ_G0030921)
Rat	MODERN SPECIES	17	Bsg (ENSRNOG00000008414)	Gzmm (ENSRNOG00000030530)	Cdc34 (ENSRNOG00000060530)	Tpgs1 (ENSRNOG00000008296)	Madcam1 (ENSRNOG00000008217)	Odf3l2 (ENSRNOG00000008199)	Shc2 (ENSRNOG00000008030)	C2cd4c (ENSRNOG00000008026)	Theg (ENSRNOG00000007960)	Mier2 (ENSRNOG00000000175)	ENSRNOG00000070264	Plpp2 (ENSRNOG00000000177)	ENSRNOG00000069262	Giot1 (ENSRNOG00000051563)	Vom2r53 (ENSRNOG00000007730)	LOC691170 (ENSRNOG00000022871) ##24	Or7a44 (ENSRNOG00000031688)	Or7a41 (ENSRNOG00000039449)	Or7a35 (ENSRNOG00000039448)	Or7a36 (ENSRNOG00000067424)	Or7a36 (ENSRNOG00000062310)	Or7a38d (ENSRNOG00000069189)	Or7a38b (ENSRNOG00000065304)	Or7a38c (ENSRNOG00000064163)	Or7a38 (ENSRNOG00000062903)	Or7a39 (ENSRNOG00000065533)	Or7a38e (ENSRNOG00000062508)	Or7c70 (ENSRNOG00000042262)	Slc1a6 (ENSRNOG00000007509)	Ccdc105 (ENSRNOG00000007375)	Casp14 (ENSRNOG00000007352)