Fungi/Metazoa group ANCESTRAL SPECIES ENSGT00930000151014 #22 Bilateria ANCESTRAL SPECIES ENSGT00930000151014 #22 Chordata ANCESTRAL SPECIES ENSGT00930000151014 #22 Vertebrata ANCESTRAL SPECIES ENSGT00930000151014 #22 Gnathostomata ANCESTRAL SPECIES 485 ENSGT00970000197141 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 Euteleostomi ANCESTRAL SPECIES 515 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 Sarcopterygii ANCESTRAL SPECIES 43 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00940000160358 ENSGT00940000166395 ENSGT00940000156765 ENSGT00390000009795 ENSGT01100000263537.b.b.c.a.a ENSGT00940000153887.B ENSGT00940000157969 ENSGT00940000161850 ENSGT00530000064222.a ENSGT00390000003107.b ENSGT00940000161006 ENSGT00940000175873 ENSGT00940000159603 Tetrapoda ANCESTRAL SPECIES 71 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00940000160358 ENSGT00940000166395 ENSGT00940000160599 ENSGT00940000156765 ENSGT00390000009795 ENSGT01100000263537.b.b.c.a.a ENSGT00940000153887.B ENSGT00940000177245 ENSGT00530000064222.a ENSGT00390000003107.b ENSGT00940000161006 ENSGT00940000158785 ENSGT00950000182980.a.b.a.a.a Amniota ANCESTRAL SPECIES 8 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Mammalia ANCESTRAL SPECIES 16 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000167687 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Theria ANCESTRAL SPECIES 14 ENSGT01040000244584 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Eutheria ANCESTRAL SPECIES 12 ENSGT01100000263540.A.b #7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00990000207089 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00990000207089 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 Primates ANCESTRAL SPECIES 2 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Haplorrhini ANCESTRAL SPECIES 12 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00910000147973 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Simiiformes ANCESTRAL SPECIES 2 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00940000160251.h ENSGT00390000006223 #15 ENSGT00390000005700.a.b #16 ENSGT00940000160884 #17 ENSGT00910000147973 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00390000000227.g.a ENSGT00830000128380.q.a ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Catarrhini ANCESTRAL SPECIES 9 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00940000160251.h ENSGT00390000006223 #15 ENSGT00390000005700.a.b #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00390000000227.g.a ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.i ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Hominoidea DUPLICATION Hominoidea DUPLICATION Hominoidea ANCESTRAL SPECIES 12 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00940000160251.h ENSGT00390000006223 #15 ENSGT00390000005700.a.b #16 ENSGT00910000148032 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014.h.a #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.j ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Hominidae ANCESTRAL SPECIES 14 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700.a.b #16 ENSGT00910000148032 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014.h.a #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.j ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Homo/Pan/Gorilla group ANCESTRAL SPECIES 12 ENSGT00940000164709.a.b.b.a.a.b.b.b.a.a.a.b.b ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00940000160251.h ENSGT00390000005700.a.b #16 ENSGT00910000148032 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014.h.a #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.j ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT00390000000153.l.a.cb.i.b.a.a ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 Homo/Pan group ANCESTRAL SPECIES 11 ENSGT00940000164709.a.b.b.a.a.b.b.b.a.a.a.b.b ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00940000160251.h ENSGT00390000005700.a.b #16 ENSGT00910000148032 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014.h.a #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00940000166472 #27 ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT00390000000153.l.a.cb.i.b.a.a ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 Human MODERN SPECIES 5 ENTPD5 (ENSG00000187097) #7 BBOF1 (ENSG00000119636) #8 ALDH6A1 (ENSG00000119711) #9 LIN52 (ENSG00000205659) #10 VSX2 (ENSG00000119614) #11 ABCD4 (ENSG00000119688) #12 VRTN (ENSG00000133980) #13 SYNDIG1L (ENSG00000183379) #14 NPC2 (ENSG00000119655) #15 ISCA2 (ENSG00000165898) #16 LTBP2 (ENSG00000119681) #17 AREL1 (ENSG00000119682) #18 FCF1 (ENSG00000119616) #19 YLPM1 (ENSG00000119596) #20 PROX2 (ENSG00000119608) #21 DLST (ENSG00000119689) #22 RPS6KL1 (ENSG00000198208) #23 PGF (ENSG00000119630) #24 EIF2B2 (ENSG00000119718) #25 MLH3 (ENSG00000119684) #26 ACYP1 (ENSG00000119640) #27 ZC2HC1C (ENSG00000119703) #28 NEK9 (ENSG00000119638) #29 TMED10 (ENSG00000170348) #30 FOS (ENSG00000170345) #31 JDP2 (ENSG00000140044) #32 BATF (ENSG00000156127) #33 FLVCR2 (ENSG00000119686) #34 TTLL5 (ENSG00000119685) #35 ERG28 (ENSG00000133935) #36 IFT43 (ENSG00000119650) #37 Pan ANCESTRAL SPECIES 8 ENSGT00940000164709.a.b.b.a.a.b.b.b.a.a.a.b.b ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00940000160251.h ENSGT00390000005700.a.b #16 ENSGT00910000148032 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014.h.a #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00940000166472 #27 ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT00390000000153.l.a.cb.i.b.a.a ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 Chimpanzee MODERN SPECIES 5 ALDH6A1 (ENSPTRG00000006531) #9 ENSPTRG00000041719 LIN52 (ENSPTRG00000030700) #10 VSX2 (ENSPTRG00000006532) #11 ABCD4 (ENSPTRG00000006533) #12 VRTN (ENSPTRG00000030698) #13 SYNDIG1L (ENSPTRG00000006534) #14 NPC2 (ENSPTRG00000006535) #15 ENSPTRG00000045441 ISCA2 (ENSPTRG00000006536) #16 LTBP2 (ENSPTRG00000006538) #17 AREL1 (ENSPTRG00000006539) #18 FCF1 (ENSPTRG00000006540) ##19 YLPM1 (ENSPTRG00000006541) #20 PROX2 (ENSPTRG00000006542) #21 DLST (ENSPTRG00000006543) #22 RPS6KL1 (ENSPTRG00000024146) #23 PGF (ENSPTRG00000006545) #24 EIF2B2 (ENSPTRG00000006547) #25 MLH3 (ENSPTRG00000006548) #26 ACYP1 (ENSPTRG00000006549) #27 ZC2HC1C (ENSPTRG00000006550) #28 ENSPTRG00000048259 NEK9 (ENSPTRG00000006551) #29 TMED10 (ENSPTRG00000052822) #30 FOS (ENSPTRG00000047703) #31 JDP2 (ENSPTRG00000006555) #32 BATF (ENSPTRG00000006556) #33 FLVCR2 (ENSPTRG00000006557) #34 ENSPTRG00000045206 ERG28 (ENSPTRG00000006559) #36 Bonobo MODERN SPECIES 5 ALDH6A1 (ENSPPAG00000030111) #9 LIN52 (ENSPPAG00000029287) #10 ENSPPAG00000028020 #11 ABCD4 (ENSPPAG00000041355) #12 VRTN (ENSPPAG00000016158) #13 SYNDIG1L (ENSPPAG00000038287) #14 ENSPPAG00000039350 #15 ENSPPAG00000040331 ISCA2 (ENSPPAG00000023891) #16 ENSPPAG00000017395 LTBP2 (ENSPPAG00000037513) #17 AREL1 (ENSPPAG00000029208) #18 FCF1 (ENSPPAG00000042313) #19 YLPM1 (ENSPPAG00000013242) #20 PROX2 (ENSPPAG00000043369) #21 DLST (ENSPPAG00000031259) #22 RPS6KL1 (ENSPPAG00000030997) #23 ENSPPAG00000031002 #24 EIF2B2 (ENSPPAG00000031197) #25 MLH3 (ENSPPAG00000043517) #26 ENSPPAG00000027442 #27 ZC2HC1C (ENSPPAG00000032553) #28 NEK9 (ENSPPAG00000017463) #29 TMED10 (ENSPPAG00000032562) #30 FOS (ENSPPAG00000021153) #31 JDP2 (ENSPPAG00000039076) #32 BATF (ENSPPAG00000038433) #33 ENSPPAG00000024550 ENSPPAG00000035673 #34 ERG28 (ENSPPAG00000038048) #36 TTLL5 (ENSPPAG00000041206) #35 Gorilla MODERN SPECIES 5 ENSGGOG00000022958 ENSGGOG00000038348 #10 VSX2 (ENSGGOG00000002583) #11 ABCD4 (ENSGGOG00000002587) #12 VRTN (ENSGGOG00000000437) #13 SYNDIG1L (ENSGGOG00000008787) #14 ENSGGOG00000012886 #15 ENSGGOG00000036134 ISCA2 (ENSGGOG00000027499) #16 LTBP2 (ENSGGOG00000012899) #17 ENSGGOG00000037625 AREL1 (ENSGGOG00000008612) #18 ENSGGOG00000016318 ##19 YLPM1 (ENSGGOG00000014195) #20 PROX2 (ENSGGOG00000022893) #21 DLST (ENSGGOG00000011591) #22 RPS6KL1 (ENSGGOG00000011607) #23 ENSGGOG00000014737 #24 EIF2B2 (ENSGGOG00000000514) #25 MLH3 (ENSGGOG00000037041) #26 ENSGGOG00000042048 ZC2HC1C (ENSGGOG00000024326) #28 NEK9 (ENSGGOG00000027555) #29 TMED10 (ENSGGOG00000007453) #30 FOS (ENSGGOG00000000527) #31 JDP2 (ENSGGOG00000043596) #32 BATF (ENSGGOG00000002267) #33 FLVCR2 (ENSGGOG00000009014) #34 ENSGGOG00000036834 ERG28 (ENSGGOG00000006493) #36 TTLL5 (ENSGGOG00000016703) #35 Orangutan MODERN SPECIES 5 ENTPD5 (ENSPPYG00000030358) #7 BBOF1 (ENSPPYG00000005979) #8 ALDH6A1 (ENSPPYG00000005980) #9 LIN52 (ENSPPYG00000032254) #10 VSX2 (ENSPPYG00000005982) #11 ABCD4 (ENSPPYG00000005983) #12 VRTN (ENSPPYG00000005985) #13 SYNDIG1L (ENSPPYG00000005986) #14 ENSPPYG00000005987 #15 ISCA2 (ENSPPYG00000005988) #16 LTBP2 (ENSPPYG00000005989) #17 AREL1 (ENSPPYG00000005990) #18 FCF1 (ENSPPYG00000005991) #19 YLPM1 (ENSPPYG00000029595) #20 ENSPPYG00000005992 #21 DLST (ENSPPYG00000005993) #22 RPS6KL1 (ENSPPYG00000005994) #23 ENSPPYG00000005995 #24 EIF2B2 (ENSPPYG00000005996) #25 MLH3 (ENSPPYG00000005997) #26 ENSPPYG00000033140 ZC2HC1C (ENSPPYG00000005999) #28 NEK9 (ENSPPYG00000006000) #29 TMED10 (ENSPPYG00000029389) #30 FOS (ENSPPYG00000006002) #31 JDP2 (ENSPPYG00000006004) #32 BATF (ENSPPYG00000006005) #33 FLVCR2 (ENSPPYG00000006006) #34 ERG28 (ENSPPYG00000006007) #36 TTLL5 (ENSPPYG00000006008) #35 TGFB3 (ENSPPYG00000006009) Gibbon MODERN SPECIES 14 BBOF1 (ENSNLEG00000016175) #8 ALDH6A1 (ENSNLEG00000016181) #9 LIN52 (ENSNLEG00000016207) #10 VSX2 (ENSNLEG00000016214) #11 ABCD4 (ENSNLEG00000016217) #12 SYNDIG1L (ENSNLEG00000016258) #14 ENSNLEG00000032793 ENSNLEG00000033895 #15 ISCA2 (ENSNLEG00000016268) #16 ENSNLEG00000016269 LTBP2 (ENSNLEG00000016271) #17 AREL1 (ENSNLEG00000016294) #18 ENSNLEG00000016311 ##19 YLPM1 (ENSNLEG00000016312) #20 PROX2 (ENSNLEG00000016325) #21 DLST (ENSNLEG00000016330) #22 RPS6KL1 (ENSNLEG00000016363) #23 ENSNLEG00000016375 #24 EIF2B2 (ENSNLEG00000016383) #25 MLH3 (ENSNLEG00000016412) #26 ENSNLEG00000016441 ZC2HC1C (ENSNLEG00000016444) #28 NEK9 (ENSNLEG00000016445) #29 TMED10 (ENSNLEG00000030333) #30 FOS (ENSNLEG00000031753) #31 ENSNLEG00000034123 JDP2 (ENSNLEG00000016475) #32 BATF (ENSNLEG00000016492) #33 ERG28 (ENSNLEG00000016519) #36 FLVCR2 (ENSNLEG00000016498) #34 ENSNLEG00000033370 Hominoidea ANCESTRAL SPECIES ENSGT00930000151014.h.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00930000151014.h.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00940000156826 ENSGT00940000160043 ENSGT00730000111176 ENSGT00940000167496 ENSGT00390000008565.b ENSGT00940000157311 ENSGT00390000005307 ENSGT00940000155917 ENSGT00940000156273 ENSGT00910000147361 ENSGT00940000157634 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00930000151014.h.b ##22 ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 ENSGT01030000234559.b ENSGT00940000154174.s.a.b ENSGT00390000000312 Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00390000003420.a.b ENSGT00940000156826 ENSGT00940000160043 ENSGT00730000111176 ENSGT00940000167496 ENSGT00390000008565.b ENSGT00940000157311 ENSGT00390000005307 ENSGT00940000155917 ENSGT00940000156273 ENSGT00940000157634 ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00930000151014.h.b ##22 ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 ENSGT01030000234559.b ENSGT00390000000312 ENSGT00410000028138 Pan ANCESTRAL SPECIES ENSGT00390000003420.a.b ENSGT00940000156826 ENSGT00730000111176 ENSGT00940000167496 ENSGT00390000008565.b ENSGT00940000157311 ENSGT00390000005307 ENSGT00940000155917 ENSGT00940000156273 ENSGT00940000157634 ENSGT00390000013354.d.a.b.c.a ENSGT00940000159735 ENSGT00390000018077 ENSGT00550000074897 ENSGT00950000183128.B ENSGT00930000151014.h.b ##22 ENSGT00940000158429 ENSGT00940000156600 ENSGT00940000156200.A ENSGT00940000153304.C ENSGT00940000154882.db ENSGT00530000064485 ENSGT00940000161095 ENSGT00940000159131 ENSGT00780000122095 ENSGT00390000004404 ENSGT00940000159289 ENSGT00730000111078 ENSGT01030000234559.b ENSGT00390000000312 ENSGT00410000028138 Chimpanzee MODERN SPECIES FUBP1 (ENSPTRG00000000888) NEXN (ENSPTRG00000000886) ENSPTRG00000045301 MIGA1 (ENSPTRG00000000884) USP33 (ENSPTRG00000000882) ZZZ3 (ENSPTRG00000000881) AK5 (ENSPTRG00000000880) ENSPTRG00000050410 PIGK (ENSPTRG00000000878) ST6GALNAC5 (ENSPTRG00000000877) ENSPTRG00000041210 ST6GALNAC3 (ENSPTRG00000000875) ASB17 (ENSPTRG00000000874) MSH4 (ENSPTRG00000000873) RABGGTB (ENSPTRG00000032439) ENSPTRG00000040641 ##22 ACADM (ENSPTRG00000000871) SLC44A5 (ENSPTRG00000000869) LHX8 (ENSPTRG00000000868) TYW3 (ENSPTRG00000000867) CRYZ (ENSPTRG00000000865) ERICH3 (ENSPTRG00000000863) LRRC53 (ENSPTRG00000000862) TNNI3K (ENSPTRG00000000861) FPGT (ENSPTRG00000040236) LRRIQ3 (ENSPTRG00000022606) NEGR1 (ENSPTRG00000000857) ZRANB2 (ENSPTRG00000000856) PTGER3 (ENSPTRG00000000855) CTH (ENSPTRG00000000854) ENSPTRG00000024173 Bonobo MODERN SPECIES DNAJB4 (ENSPPAG00000035241) ENSPPAG00000038243 NEXN (ENSPPAG00000031451) MIGA1 (ENSPPAG00000034093) USP33 (ENSPPAG00000043017) ZZZ3 (ENSPPAG00000039210) AK5 (ENSPPAG00000033952) ENSPPAG00000038452 PIGK (ENSPPAG00000039870) ST6GALNAC5 (ENSPPAG00000025247) ENSPPAG00000033182 ST6GALNAC3 (ENSPPAG00000029808) ASB17 (ENSPPAG00000039777) MSH4 (ENSPPAG00000036948) RABGGTB (ENSPPAG00000033708) ENSPPAG00000002504 ##22 ACADM (ENSPPAG00000036005) ENSPPAG00000027778 SLC44A5 (ENSPPAG00000029429) LHX8 (ENSPPAG00000036431) TYW3 (ENSPPAG00000043438) CRYZ (ENSPPAG00000042710) ERICH3 (ENSPPAG00000032285) LRRC53 (ENSPPAG00000031788) TNNI3K (ENSPPAG00000038571) LRRIQ3 (ENSPPAG00000037287) NEGR1 (ENSPPAG00000042748) ZRANB2 (ENSPPAG00000037049) PTGER3 (ENSPPAG00000043015) CTH (ENSPPAG00000030218) ENSPPAG00000013130 Gorilla MODERN SPECIES ENSGGOG00000027554 NEXN (ENSGGOG00000034812) MIGA1 (ENSGGOG00000017058) USP33 (ENSGGOG00000007543) ZZZ3 (ENSGGOG00000009242) AK5 (ENSGGOG00000014497) ENSGGOG00000027673 PIGK (ENSGGOG00000009240) ENSGGOG00000036290 ST6GALNAC5 (ENSGGOG00000005452) TPI1 (ENSGGOG00000023036) ST6GALNAC3 (ENSGGOG00000001465) ASB17 (ENSGGOG00000003221) MSH4 (ENSGGOG00000044071) RABGGTB (ENSGGOG00000004675) ENSGGOG00000024667 ##22 ACADM (ENSGGOG00000024342) ENSGGOG00000038599 SLC44A5 (ENSGGOG00000007029) LHX8 (ENSGGOG00000026204) TYW3 (ENSGGOG00000013676) CRYZ (ENSGGOG00000034854) ERICH3 (ENSGGOG00000010123) LRRC53 (ENSGGOG00000011434) TNNI3K (ENSGGOG00000016503) FPGT (ENSGGOG00000036582) LRRIQ3 (ENSGGOG00000025460) NEGR1 (ENSGGOG00000007438) ZRANB2 (ENSGGOG00000023501) PTGER3 (ENSGGOG00000000587) ENSGGOG00000017176 Hominoidea ANCESTRAL SPECIES ENSGT00930000151014.g ##22 Hominidae ANCESTRAL SPECIES ENSGT00930000151014.g ##22 Orangutan MODERN SPECIES GIPC2 (ENSPPYG00000001218) DNAJB4 (ENSPPYG00000001217) FUBP1 (ENSPPYG00000001219) NEXN (ENSPPYG00000001220) MIGA1 (ENSPPYG00000001221) USP33 (ENSPPYG00000001222) ZZZ3 (ENSPPYG00000001223) AK5 (ENSPPYG00000001224) PIGK (ENSPPYG00000001225) ST6GALNAC5 (ENSPPYG00000001226) ST6GALNAC3 (ENSPPYG00000030574) ASB17 (ENSPPYG00000001228) MSH4 (ENSPPYG00000032071) RABGGTB (ENSPPYG00000001230) ACADM (ENSPPYG00000001231) ENSPPYG00000033221 ##22 SLC44A5 (ENSPPYG00000001232) LHX8 (ENSPPYG00000001233) TYW3 (ENSPPYG00000001234) CRYZ (ENSPPYG00000001235) ERICH3 (ENSPPYG00000001236) FPGT (ENSPPYG00000001237) LRRC53 (ENSPPYG00000001238) LRRIQ3 (ENSPPYG00000039895) NEGR1 (ENSPPYG00000001239) ZRANB2 (ENSPPYG00000001240) PTGER3 (ENSPPYG00000001241) ENSPPYG00000037732 CTH (ENSPPYG00000001242) ENSPPYG00000001243 ANKRD13C (ENSPPYG00000001244) Cercopithecidae ANCESTRAL SPECIES 7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700.a.b #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00390000000227.g.a ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.i ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159991.A ENSGT00940000153883.a.a ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700.a.b #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00390000000227.g.a.d ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.i ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159991.A ENSGT00940000153883.a.a ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 Vervet Monkey MODERN SPECIES 16 COQ6 (ENSCSAG00000012631) ENTPD5 (ENSCSAG00000012613) #7 BBOF1 (ENSCSAG00000012603) #8 ALDH6A1 (ENSCSAG00000012592) #9 LIN52 (ENSCSAG00000012576) #10 VSX2 (ENSCSAG00000012566) #11 ABCD4 (ENSCSAG00000012543) #12 VRTN (ENSCSAG00000019573) #13 SYNDIG1L (ENSCSAG00000012533) #14 NPC2 (ENSCSAG00000012527) #15 ISCA2 (ENSCSAG00000012521) #16 LTBP2 (ENSCSAG00000012456) #17 AREL1 (ENSCSAG00000012298) #18 YLPM1 (ENSCSAG00000012291) #20 PROX2 (ENSCSAG00000012283) #21 DLST (ENSCSAG00000012278) #22 RPS6KL1 (ENSCSAG00000012263) #23 PGF (ENSCSAG00000012223) #24 EIF2B2 (ENSCSAG00000012187) #25 MLH3 (ENSCSAG00000012181) #26 ENSCSAG00000012173 ZC2HC1C (ENSCSAG00000012169) #28 NEK9 (ENSCSAG00000012158) #29 TMED10 (ENSCSAG00000012147) #30 FOS (ENSCSAG00000012136) #31 JDP2 (ENSCSAG00000012122) #32 BATF (ENSCSAG00000012114) #33 FLVCR2 (ENSCSAG00000012084) #34 ERG28 (ENSCSAG00000012045) #36 TTLL5 (ENSCSAG00000012037) #35 TGFB3 (ENSCSAG00000012003) Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00390000017443.s.a.a ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700.a.b #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00390000000227.g.a.d ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.i ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000153883.a.a ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 Macaca ANCESTRAL SPECIES 1 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00390000017443.s.a.a ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700.a.b #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00390000000227.g.a.d ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.i ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000153883.a.a ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 Macaca_a ANCESTRAL SPECIES 2 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00390000017443.s.a.a ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700.a.b #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.b ##19 ENSGT01100000263539.b.a.a.a.b.b.a.b.a.a.a.b.a.a.b.a.a ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.i ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000167556.b.b.a.b.a.a.a.b.a.b.a.a.a.a ENSGT00940000159276 #31 ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.a.b.a.b.a.a.a ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 Rhesus MODERN SPECIES 17 COQ6 (ENSMMUG00000011148) BBOF1 (ENSMMUG00000012683) #8 ALDH6A1 (ENSMMUG00000012684) #9 LIN52 (ENSMMUG00000052506) #10 VSX2 (ENSMMUG00000029272) #11 ABCD4 (ENSMMUG00000004041) #12 VRTN (ENSMMUG00000012383) #13 SYNDIG1L (ENSMMUG00000038996) #14 NPC2 (ENSMMUG00000006563) #15 ISCA2 (ENSMMUG00000050430) #16 LTBP2 (ENSMMUG00000018015) #17 FCF1 (ENSMMUG00000008887) #19 ENSMMUG00000056376 YLPM1 (ENSMMUG00000004255) #20 PROX2 (ENSMMUG00000004259) #21 DLST (ENSMMUG00000004260) #22 RPS6KL1 (ENSMMUG00000004263) #23 PGF (ENSMMUG00000002909) #24 EIF2B2 (ENSMMUG00000002910) #25 MLH3 (ENSMMUG00000002911) #26 ZC2HC1C (ENSMMUG00000015165) #28 NEK9 (ENSMMUG00000015166) #29 TMED10 (ENSMMUG00000015168) #30 ENSMMUG00000052002 FOS (ENSMMUG00000040100) #31 ENSMMUG00000052410 JDP2 (ENSMMUG00000002797) #32 BATF (ENSMMUG00000003834) #33 FLVCR2 (ENSMMUG00000017665) #34 ERG28 (ENSMMUG00000012064) #36 TTLL5 (ENSMMUG00000012065) #35 Crab-eating macaque MODERN SPECIES 17 ENSMFAG00000058590 VSX2 (ENSMFAG00000050163) #11 ENSMFAG00000050925 ABCD4 (ENSMFAG00000031273) #12 ENSMFAG00000056780 VRTN (ENSMFAG00000011666) #13 SYNDIG1L (ENSMFAG00000039919) #14 NPC2 (ENSMFAG00000035734) #15 ISCA2 (ENSMFAG00000049400) #16 LTBP2 (ENSMFAG00000039527) #17 AREL1 (ENSMFAG00000034133) #18 FCF1 (ENSMFAG00000043357) ##19 ENSMFAG00000050358 YLPM1 (ENSMFAG00000034471) #20 PROX2 (ENSMFAG00000032039) #21 DLST (ENSMFAG00000030177) #22 RPS6KL1 (ENSMFAG00000037597) #23 PGF (ENSMFAG00000044494) #24 EIF2B2 (ENSMFAG00000043749) #25 MLH3 (ENSMFAG00000043843) #26 ENSMFAG00000030959 ZC2HC1C (ENSMFAG00000013902) #28 NEK9 (ENSMFAG00000037572) #29 TMED10 (ENSMFAG00000031081) #30 ENSMFAG00000050715 FOS (ENSMFAG00000014606) #31 ENSMFAG00000061921 JDP2 (ENSMFAG00000033637) #32 BATF (ENSMFAG00000031172) #33 FLVCR2 (ENSMFAG00000039606) #34 ENSMFAG00000053687 Pig-tailed macaque MODERN SPECIES 225 BBOF1 (ENSMNEG00000019451) #8 ALDH6A1 (ENSMNEG00000030097) #9 LIN52 (ENSMNEG00000044208) #10 VSX2 (ENSMNEG00000041246) #11 ABCD4 (ENSMNEG00000039159) #12 VRTN (ENSMNEG00000001103) #13 SYNDIG1L (ENSMNEG00000028619) #14 NPC2 (ENSMNEG00000040141) #15 ISCA2 (ENSMNEG00000036042) #16 LTBP2 (ENSMNEG00000036133) #17 AREL1 (ENSMNEG00000031507) #18 ENSMNEG00000033468 #19 YLPM1 (ENSMNEG00000036638) #20 PROX2 (ENSMNEG00000034494) #21 ENSMNEG00000037226 DLST (ENSMNEG00000035472) #22 RPS6KL1 (ENSMNEG00000043637) #23 PGF (ENSMNEG00000030055) #24 EIF2B2 (ENSMNEG00000034034) #25 MLH3 (ENSMNEG00000032615) #26 ENSMNEG00000041248 ZC2HC1C (ENSMNEG00000044895) #28 NEK9 (ENSMNEG00000038107) #29 TMED10 (ENSMNEG00000027961) #30 FOS (ENSMNEG00000031655) #31 JDP2 (ENSMNEG00000044862) #32 ENSMNEG00000033927 BATF (ENSMNEG00000028812) #33 ERG28 (ENSMNEG00000004663) #36 FLVCR2 (ENSMNEG00000041899) #34 ENSMNEG00000032194 Cercopithecinae_b ANCESTRAL SPECIES 8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00390000017443.s.a.a ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700.a.b #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00390000000227.g.a.d ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.i ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000153883.a.a ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 Olive baboon MODERN SPECIES 17 ALDH6A1 (ENSPANG00000000641) #9 LIN52 (ENSPANG00000000642) #10 ENSPANG00000038524 VSX2 (ENSPANG00000012707) #11 ENSPANG00000042755 #12 ABCD4 (ENSPANG00000007033) #12 VRTN (ENSPANG00000012341) #13 SYNDIG1L (ENSPANG00000001022) #14 NPC2 (ENSPANG00000013438) #15 ISCA2 (ENSPANG00000006983) #16 LTBP2 (ENSPANG00000012340) #17 AREL1 (ENSPANG00000018774) #18 FCF1 (ENSPANG00000013437) #19 YLPM1 (ENSPANG00000006982) #20 PROX2 (ENSPANG00000024084) #21 DLST (ENSPANG00000024086) #22 RPS6KL1 (ENSPANG00000016739) #23 PGF (ENSPANG00000017556) #24 EIF2B2 (ENSPANG00000006825) #25 MLH3 (ENSPANG00000016738) #26 ENSPANG00000006824 ZC2HC1C (ENSPANG00000045711) #28 NEK9 (ENSPANG00000006981) #29 TMED10 (ENSPANG00000019635) #30 FOS (ENSPANG00000020551) #31 JDP2 (ENSPANG00000019986) #32 BATF (ENSPANG00000021772) #33 ERG28 (ENSPANG00000022559) #36 FLVCR2 (ENSPANG00000017555) #34 ENSPANG00000030981 TTLL5 (ENSPANG00000021771) #35 Cercopithecinae_d ANCESTRAL SPECIES 11 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00390000017443.s.a.a ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700.a.b #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00390000000227.g.a.d ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.i ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000153883.a.a ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 Sooty mangabey MODERN SPECIES 165 ALDH6A1 (ENSCATG00000020482) #9 ENSCATG00000008507 LIN52 (ENSCATG00000030477) #10 ENSCATG00000031234 VSX2 (ENSCATG00000042328) #11 ABCD4 (ENSCATG00000044007) #12 VRTN (ENSCATG00000016010) #13 SYNDIG1L (ENSCATG00000034933) #14 NPC2 (ENSCATG00000034248) #15 ISCA2 (ENSCATG00000039296) #16 LTBP2 (ENSCATG00000037020) #17 AREL1 (ENSCATG00000024599) #18 ENSCATG00000038174 #19 YLPM1 (ENSCATG00000029765) #20 PROX2 (ENSCATG00000005114) #21 DLST (ENSCATG00000021002) #22 RPS6KL1 (ENSCATG00000030155) #23 PGF (ENSCATG00000021773) #24 EIF2B2 (ENSCATG00000044945) #25 MLH3 (ENSCATG00000037886) #26 ENSCATG00000044270 ZC2HC1C (ENSCATG00000039242) #28 NEK9 (ENSCATG00000037694) #29 TMED10 (ENSCATG00000031220) #30 FOS (ENSCATG00000044925) #31 JDP2 (ENSCATG00000041724) #32 ENSCATG00000031624 BATF (ENSCATG00000032310) #33 FLVCR2 (ENSCATG00000001690) #34 ERG28 (ENSCATG00000027251) #36 TTLL5 (ENSCATG00000039057) #35 Drill MODERN SPECIES 827 ENSMLEG00000040250 ALDH6A1 (ENSMLEG00000041110) #9 LIN52 (ENSMLEG00000032006) #10 VSX2 (ENSMLEG00000003115) #11 ABCD4 (ENSMLEG00000041560) #12 VRTN (ENSMLEG00000011469) #13 SYNDIG1L (ENSMLEG00000034438) #14 NPC2 (ENSMLEG00000043459) #15 ISCA2 (ENSMLEG00000031882) #16 LTBP2 (ENSMLEG00000036452) #17 AREL1 (ENSMLEG00000017085) #18 ENSMLEG00000043413 ##19 YLPM1 (ENSMLEG00000041226) #20 PROX2 (ENSMLEG00000044172) #21 ENSMLEG00000031552 DLST (ENSMLEG00000037511) #22 RPS6KL1 (ENSMLEG00000037049) #23 PGF (ENSMLEG00000028938) #24 EIF2B2 (ENSMLEG00000041601) #25 MLH3 (ENSMLEG00000009239) #26 ENSMLEG00000033619 ZC2HC1C (ENSMLEG00000040598) #28 NEK9 (ENSMLEG00000038474) #29 TMED10 (ENSMLEG00000038447) #30 FOS (ENSMLEG00000040559) #31 JDP2 (ENSMLEG00000038051) #32 ENSMLEG00000041625 BATF (ENSMLEG00000033193) #33 FLVCR2 (ENSMLEG00000042003) #34 ERG28 (ENSMLEG00000034213) #36 TTLL5 (ENSMLEG00000033082) #35 Rhinopithecus ANCESTRAL SPECIES 42 ENSGT01100000263540.A.b #7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700.a.b #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.i ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000153883.a.a ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 Golden snub-nosed monkey MODERN SPECIES 2365 BBOF1 (ENSRROG00000039245) #8 ALDH6A1 (ENSRROG00000035589) #9 LIN52 (ENSRROG00000038659) #10 VSX2 (ENSRROG00000035399) #11 ABCD4 (ENSRROG00000036607) #12 VRTN (ENSRROG00000010435) #13 SYNDIG1L (ENSRROG00000041128) #14 NPC2 (ENSRROG00000037959) #15 ISCA2 (ENSRROG00000030258) #16 LTBP2 (ENSRROG00000036111) #17 ENSRROG00000045039 AREL1 (ENSRROG00000031099) #18 ENSRROG00000037201 #19 YLPM1 (ENSRROG00000039845) #20 PROX2 (ENSRROG00000033966) #21 DLST (ENSRROG00000045190) #22 RPS6KL1 (ENSRROG00000033229) #23 PGF (ENSRROG00000034324) #24 EIF2B2 (ENSRROG00000042761) #25 MLH3 (ENSRROG00000029699) #26 ENSRROG00000037333 ZC2HC1C (ENSRROG00000045324) #28 NEK9 (ENSRROG00000011665) #29 TMED10 (ENSRROG00000034110) #30 FOS (ENSRROG00000038425) #31 JDP2 (ENSRROG00000000567) #32 ENSRROG00000034062 BATF (ENSRROG00000041232) #33 FLVCR2 (ENSRROG00000042695) #34 ERG28 (ENSRROG00000043806) #36 TTLL5 (ENSRROG00000038675) #35 Black snub-nosed monkey MODERN SPECIES 656 ENTPD5 (ENSRBIG00000032979) #7 BBOF1 (ENSRBIG00000031361) #8 ALDH6A1 (ENSRBIG00000034701) #9 LIN52 (ENSRBIG00000040121) #10 VSX2 (ENSRBIG00000030815) #11 ABCD4 (ENSRBIG00000031434) #12 VRTN (ENSRBIG00000024397) #13 SYNDIG1L (ENSRBIG00000032309) #14 NPC2 (ENSRBIG00000030802) #15 ISCA2 (ENSRBIG00000038871) #16 LTBP2 (ENSRBIG00000029959) #17 AREL1 (ENSRBIG00000042880) #18 ENSRBIG00000035012 #19 YLPM1 (ENSRBIG00000042494) #20 PROX2 (ENSRBIG00000034329) #21 DLST (ENSRBIG00000044815) #22 RPS6KL1 (ENSRBIG00000040806) #23 PGF (ENSRBIG00000031738) #24 EIF2B2 (ENSRBIG00000040243) #25 MLH3 (ENSRBIG00000031546) #26 ENSRBIG00000028316 ZC2HC1C (ENSRBIG00000029182) #28 NEK9 (ENSRBIG00000032887) #29 TMED10 (ENSRBIG00000042626) #30 FOS (ENSRBIG00000036327) #31 JDP2 (ENSRBIG00000030082) #32 ENSRBIG00000036437 BATF (ENSRBIG00000038010) #33 FLVCR2 (ENSRBIG00000038928) #34 ERG28 (ENSRBIG00000029268) #36 TTLL5 (ENSRBIG00000044481) #35 Platyrrhini ANCESTRAL SPECIES 4 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b.k #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00940000160251.h.a ENSGT00390000006223 #15 ENSGT00390000005700.a.a ##16 ENSGT00940000160884 #17 ENSGT00910000147973 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b.a #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00390000000227.g.a ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Mas night monkey MODERN SPECIES 825 BBOF1 (ENSANAG00000023794) #8 ALDH6A1 (ENSANAG00000027801) #9 LIN52 (ENSANAG00000022775) #10 VSX2 (ENSANAG00000023147) #11 ENSANAG00000022365 #12 SYNDIG1L (ENSANAG00000024522) #14 ENSANAG00000021950 NPC2 (ENSANAG00000035008) #15 ENSANAG00000028498 ##16 LTBP2 (ENSANAG00000036688) #17 ENSANAG00000023213 AREL1 (ENSANAG00000027921) #18 ENSANAG00000026765 ##19 YLPM1 (ENSANAG00000024403) #20 PROX2 (ENSANAG00000038021) #21 DLST (ENSANAG00000035966) #22 RPS6KL1 (ENSANAG00000030516) #23 PGF (ENSANAG00000032847) #24 EIF2B2 (ENSANAG00000025345) #25 MLH3 (ENSANAG00000022727) #26 ENSANAG00000026223 ZC2HC1C (ENSANAG00000026717) #28 NEK9 (ENSANAG00000016195) #29 TMED10 (ENSANAG00000022267) #30 ENSANAG00000019432 FOS (ENSANAG00000029534) #31 JDP2 (ENSANAG00000034209) #32 BATF (ENSANAG00000031689) #33 ERG28 (ENSANAG00000032608) #36 FLVCR2 (ENSANAG00000026869) #34 TTLL5 (ENSANAG00000035139) #35 Cebidae ANCESTRAL SPECIES 3 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b.k #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00940000160251.h.a ENSGT00390000005700.a.a ##16 ENSGT00940000160884 #17 ENSGT00910000147973 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b.a #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00390000000227.g.a ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Cebidae_a ANCESTRAL SPECIES 4 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b.k #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00940000160251.h.a ENSGT00390000005700.a.a ##16 ENSGT00940000160884 #17 ENSGT00910000147973 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.b.a #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00390000000227.g.a ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.bb #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Capuchin DUPLICATION Capuchin DUPLICATION Capuchin MODERN SPECIES 472 DDHD1 (ENSCCAG00000021731) ENSCCAG00000022040 #22 FERMT2 (ENSCCAG00000022341) GNPNAT1 (ENSCCAG00000037420) STYX (ENSCCAG00000021821) PSMC6 (ENSCCAG00000032837) ERO1A (ENSCCAG00000029771) GPR137C (ENSCCAG00000029697) TXNDC16 (ENSCCAG00000033371) ENSCCAG00000031355 PTGER2 (ENSCCAG00000024716) PTGDR (ENSCCAG00000021439) ENSCCAG00000035422 NID2 (ENSCCAG00000024531) RTRAF (ENSCCAG00000032093) GNG2 (ENSCCAG00000028948) ENSCCAG00000036892 Capuchin MODERN SPECIES 54 LIN52 (ENSCCAG00000031296) #10 VSX2 (ENSCCAG00000023324) #11 ENSCCAG00000032477 #12 VRTN (ENSCCAG00000019702) #13 SYNDIG1L (ENSCCAG00000030697) #14 ENSCCAG00000036597 ENSCCAG00000022939 #15 ISCA2 (ENSCCAG00000029795) ##16 LTBP2 (ENSCCAG00000027073) #17 ENSCCAG00000029235 AREL1 (ENSCCAG00000037317) #18 FCF1 (ENSCCAG00000032200) #19 YLPM1 (ENSCCAG00000024788) #20 PROX2 (ENSCCAG00000026255) #21 ENSCCAG00000035622 ENSCCAG00000027520 #22 RPS6KL1 (ENSCCAG00000029866) #23 PGF (ENSCCAG00000019441) #24 EIF2B2 (ENSCCAG00000034957) #25 MLH3 (ENSCCAG00000028660) #26 ENSCCAG00000037698 ZC2HC1C (ENSCCAG00000009576) #28 NEK9 (ENSCCAG00000027751) #29 TMED10 (ENSCCAG00000038051) #30 FOS (ENSCCAG00000025794) #31 JDP2 (ENSCCAG00000029129) #32 BATF (ENSCCAG00000037730) #33 ERG28 (ENSCCAG00000033804) #36 FLVCR2 (ENSCCAG00000022530) #34 ENSCCAG00000029450 TTLL5 (ENSCCAG00000032726) #35 Capuchin MODERN SPECIES 145 PLEKHN1 (ENSCCAG00000027320) KLHL17 (ENSCCAG00000035931) NOC2L (ENSCCAG00000035002) SAMD11 (ENSCCAG00000033909) FREM2 (ENSCCAG00000034192) STOML3 (ENSCCAG00000038074) PROSER1 (ENSCCAG00000033560) NHLRC3 (ENSCCAG00000032791) LHFPL6 (ENSCCAG00000032600) COG6 (ENSCCAG00000023043) FOXO1 (ENSCCAG00000036978) MRPS31 (ENSCCAG00000033771) SLC25A15 (ENSCCAG00000026532) ENSCCAG00000036530 ALG11 (ENSCCAG00000035914) ENSCCAG00000028029 #22 ATP7B (ENSCCAG00000032531) TMEM272 (ENSCCAG00000020085) DHRS12 (ENSCCAG00000030268) WDFY2 (ENSCCAG00000035502) INTS6 (ENSCCAG00000034071) SERPINE3 (ENSCCAG00000032156) FAM124A (ENSCCAG00000025585) Bolivian squirrel monkey MODERN SPECIES 52 BBOF1 (ENSSBOG00000032274) #8 ALDH6A1 (ENSSBOG00000023484) #9 LIN52 (ENSSBOG00000034707) #10 ENSSBOG00000022778 VSX2 (ENSSBOG00000031713) #11 ABCD4 (ENSSBOG00000033353) #12 SYNDIG1L (ENSSBOG00000034851) #14 NPC2 (ENSSBOG00000023280) #15 ENSSBOG00000028294 ENSSBOG00000031449 ##16 LTBP2 (ENSSBOG00000025865) #17 AREL1 (ENSSBOG00000031683) #18 ENSSBOG00000024765 #19 YLPM1 (ENSSBOG00000020052) #20 PROX2 (ENSSBOG00000035644) #21 DLST (ENSSBOG00000020050) #22 RPS6KL1 (ENSSBOG00000021119) #23 PGF (ENSSBOG00000021274) #24 EIF2B2 (ENSSBOG00000009267) #25 MLH3 (ENSSBOG00000018430) #26 ENSSBOG00000030708 ZC2HC1C (ENSSBOG00000022385) #28 NEK9 (ENSSBOG00000021585) #29 TMED10 (ENSSBOG00000023014) #30 ENSSBOG00000022826 FOS (ENSSBOG00000021663) #31 AIF1 (ENSSBOG00000020993) JDP2 (ENSSBOG00000033222) #32 BATF (ENSSBOG00000034354) #33 ENSSBOG00000006701 FLVCR2 (ENSSBOG00000030433) #34 Marmoset DUPLICATION Marmoset MODERN SPECIES 9 PRKAB2 (ENSCJAG00000076520) FMO5 (ENSCJAG00000056470) ENSCJAG00000039766 #22 CHD1L (ENSCJAG00000002406) BCL9 (ENSCJAG00000002384) ACP6 (ENSCJAG00000002370) GJA5 (ENSCJAG00000084416) GJA8 (ENSCJAG00000002367) ENSCJAG00000002362 PDZK1 (ENSCJAG00000002353) CD160 (ENSCJAG00000002349) RNF115 (ENSCJAG00000002332) POLR3C (ENSCJAG00000002314) NUDT17 (ENSCJAG00000074938) PIAS3 (ENSCJAG00000002257) ANKRD35 (ENSCJAG00000002247) ENSCJAG00000073435 ITGA10 (ENSCJAG00000002231) Marmoset MODERN SPECIES 1 ALDH6A1 (ENSCJAG00000020412) #9 LIN52 (ENSCJAG00000047702) #10 VSX2 (ENSCJAG00000020442) #11 ABCD4 (ENSCJAG00000020446) #12 ENSCJAG00000055155 ENSCJAG00000075451 SYNDIG1L (ENSCJAG00000072523) #14 NPC2 (ENSCJAG00000020476) #15 ENSCJAG00000057253 ENSCJAG00000020479 ##16 LTBP2 (ENSCJAG00000020480) #17 AREL1 (ENSCJAG00000020497) #18 FCF1 (ENSCJAG00000020518) ##19 YLPM1 (ENSCJAG00000020522) #20 PROX2 (ENSCJAG00000020548) #21 DLST (ENSCJAG00000020551) #22 RPS6KL1 (ENSCJAG00000020566) #23 PGF (ENSCJAG00000020572) #24 EIF2B2 (ENSCJAG00000044557) #25 MLH3 (ENSCJAG00000020596) #26 ENSCJAG00000083598 ZC2HC1C (ENSCJAG00000046911) #28 NEK9 (ENSCJAG00000020610) #29 TMED10 (ENSCJAG00000057118) #30 FOS (ENSCJAG00000020633) #31 ENSCJAG00000085859 JDP2 (ENSCJAG00000020645) #32 BATF (ENSCJAG00000081507) #33 FLVCR2 (ENSCJAG00000020653) #34 ERG28 (ENSCJAG00000020659) #36 TTLL5 (ENSCJAG00000020665) #35 Tarsier MODERN SPECIES 5507 YLPM1 (ENSTSYG00000009612) #20 PROX2 (ENSTSYG00000025782) #21 DLST (ENSTSYG00000007937) #22 RPS6KL1 (ENSTSYG00000037448) #23 PGF (ENSTSYG00000035657) #24 EIF2B2 (ENSTSYG00000034108) #25 MLH3 (ENSTSYG00000000754) #26 ACYP1 (ENSTSYG00000000755) ZC2HC1C (ENSTSYG00000003113) #28 NEK9 (ENSTSYG00000005042) #29 TMED10 (ENSTSYG00000031453) #30 FOS (ENSTSYG00000013658) #31 JDP2 (ENSTSYG00000031315) #32 BATF (ENSTSYG00000005296) #33 ERG28 (ENSTSYG00000035814) #36 FLVCR2 (ENSTSYG00000013562) #34 ENSTSYG00000030978 ENSTSYG00000013572 #35 Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Lemuriformes DUPLICATION Lemuriformes ANCESTRAL SPECIES ENSGT00930000151014.m #22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00930000151014.m #22 Coquerels sifaka MODERN SPECIES 236 ENSPCOG00000025488 CABYR (ENSPCOG00000023455) OSBPL1A (ENSPCOG00000026731) IMPACT (ENSPCOG00000015567) ZNF521 (ENSPCOG00000003783) ENSPCOG00000005637 PSMA8 (ENSPCOG00000016573) TAF4B (ENSPCOG00000019250) ENSPCOG00000018213 #22 KCTD1 (ENSPCOG00000028099) AQP4 (ENSPCOG00000026243) CHST9 (ENSPCOG00000026106) CDH2 (ENSPCOG00000014519) ENSPCOG00000014236 ENSPCOG00000007456 Lemuriformes ANCESTRAL SPECIES 28 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014.n #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Mouse lemur MODERN SPECIES 22 ENTPD5 (ENSMICG00000003012) #7 ENSMICG00000033736 BBOF1 (ENSMICG00000008464) #8 ALDH6A1 (ENSMICG00000008467) #9 LIN52 (ENSMICG00000008474) #10 VSX2 (ENSMICG00000037778) #11 ABCD4 (ENSMICG00000008482) #12 SYNDIG1L (ENSMICG00000027038) #14 NPC2 (ENSMICG00000006008) #15 ISCA2 (ENSMICG00000043470) #16 LTBP2 (ENSMICG00000006026) #17 AREL1 (ENSMICG00000006054) #18 ENSMICG00000006061 ##19 YLPM1 (ENSMICG00000006067) #20 ENSMICG00000006078 #21 DLST (ENSMICG00000006080) #22 RPS6KL1 (ENSMICG00000006086) #23 PGF (ENSMICG00000006094) #24 EIF2B2 (ENSMICG00000006100) #25 MLH3 (ENSMICG00000037718) #26 ENSMICG00000026687 ZC2HC1C (ENSMICG00000015986) #28 NEK9 (ENSMICG00000015999) #29 TMED10 (ENSMICG00000016016) #30 FOS (ENSMICG00000016026) #31 JDP2 (ENSMICG00000029702) #32 BATF (ENSMICG00000029066) #33 FLVCR2 (ENSMICG00000016055) #34 ERG28 (ENSMICG00000016077) #36 TTLL5 (ENSMICG00000016085) #35 TGFB3 (ENSMICG00000016110) Lemuriformes_a ANCESTRAL SPECIES 11 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014.n #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Greater bamboo lemur MODERN SPECIES 848 ENSPSMG00000015393 ENSPSMG00000015384 ENSPSMG00000015378 TRMT10C (ENSPSMG00000015367) ENSPSMG00000015360 YLPM1 (ENSPSMG00000015336) #20 PROX2 (ENSPSMG00000015245) #21 DLST (ENSPSMG00000015212) #22 RPS6KL1 (ENSPSMG00000015121) #23 PGF (ENSPSMG00000015095) #24 EIF2B2 (ENSPSMG00000015056) #25 MLH3 (ENSPSMG00000014947) #26 ENSPSMG00000014839 ZC2HC1C (ENSPSMG00000014834) #28 NEK9 (ENSPSMG00000014787) #29 TMED10 (ENSPSMG00000014729) #30 FOS (ENSPSMG00000014692) #31 JDP2 (ENSPSMG00000014639) #32 BATF (ENSPSMG00000014617) #33 ERG28 (ENSPSMG00000014608) #36 FLVCR2 (ENSPSMG00000014586) #34 ENSPSMG00000014531 ZC3H12A (ENSPSMG00000014523) Coquerels sifaka MODERN SPECIES 653 COQ6 (ENSPCOG00000023336) ENTPD5 (ENSPCOG00000019244) #7 BBOF1 (ENSPCOG00000009977) #8 ALDH6A1 (ENSPCOG00000023367) #9 LIN52 (ENSPCOG00000002646) #10 VSX2 (ENSPCOG00000020252) #11 ABCD4 (ENSPCOG00000013720) #12 SYNDIG1L (ENSPCOG00000019267) #14 NPC2 (ENSPCOG00000023731) #15 ISCA2 (ENSPCOG00000018511) #16 LTBP2 (ENSPCOG00000026819) #17 AREL1 (ENSPCOG00000025544) #18 FCF1 (ENSPCOG00000012922) ##19 YLPM1 (ENSPCOG00000015405) #20 PROX2 (ENSPCOG00000016556) #21 ENSPCOG00000023446 #22 RPS6KL1 (ENSPCOG00000026169) #23 PGF (ENSPCOG00000016435) #24 EIF2B2 (ENSPCOG00000016320) #25 MLH3 (ENSPCOG00000002921) #26 ACYP1 (ENSPCOG00000028631) #27 ZC2HC1C (ENSPCOG00000017757) #28 NEK9 (ENSPCOG00000027956) #29 TMED10 (ENSPCOG00000022239) #30 FOS (ENSPCOG00000000082) #31 JDP2 (ENSPCOG00000018857) #32 BATF (ENSPCOG00000025160) #33 FLVCR2 (ENSPCOG00000028565) #34 ERG28 (ENSPCOG00000021093) #36 TTLL5 (ENSPCOG00000023679) #35 TGFB3 (ENSPCOG00000014765) Bushbaby MODERN SPECIES 135 COQ6 (ENSOGAG00000006406) ENTPD5 (ENSOGAG00000006408) #7 ALDH6A1 (ENSOGAG00000003006) #9 LIN52 (ENSOGAG00000003009) #10 VSX2 (ENSOGAG00000013552) #11 ABCD4 (ENSOGAG00000013557) #12 VRTN (ENSOGAG00000024981) #13 SYNDIG1L (ENSOGAG00000030617) #14 NPC2 (ENSOGAG00000002697) #15 ISCA2 (ENSOGAG00000002698) #16 LTBP2 (ENSOGAG00000002703) #17 AREL1 (ENSOGAG00000002706) #18 ENSOGAG00000002711 #19 YLPM1 (ENSOGAG00000001323) #20 PROX2 (ENSOGAG00000001327) #21 DLST (ENSOGAG00000027931) #22 RPS6KL1 (ENSOGAG00000001332) #23 PGF (ENSOGAG00000008229) #24 EIF2B2 (ENSOGAG00000008234) #25 MLH3 (ENSOGAG00000008240) #26 ENSOGAG00000029028 ZC2HC1C (ENSOGAG00000032675) #28 NEK9 (ENSOGAG00000008245) #29 TMED10 (ENSOGAG00000028272) #30 FOS (ENSOGAG00000032356) #31 JDP2 (ENSOGAG00000024796) #32 BATF (ENSOGAG00000010133) #33 FLVCR2 (ENSOGAG00000010134) #34 ERG28 (ENSOGAG00000009368) #36 TTLL5 (ENSOGAG00000009371) #35 TGFB3 (ENSOGAG00000009386) Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00990000207089 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 Tree shrew MODERN SPECIES 822 DLST (ENSTBEG00000006475) #22 RPS6KL1 (ENSTBEG00000006769) #23 ENSTBEG00000006937 Glires ANCESTRAL SPECIES 12 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00990000207089 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 Lagomorpha ANCESTRAL SPECIES 25 ENSGT01100000263540.A.b #7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00990000207089 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 Rabbit MODERN SPECIES 12 BBOF1 (ENSOCUG00000017487) #8 ALDH6A1 (ENSOCUG00000025121) #9 LIN52 (ENSOCUG00000017491) #10 VSX2 (ENSOCUG00000017496) #11 ABCD4 (ENSOCUG00000003484) #12 VRTN (ENSOCUG00000027081) #13 SYNDIG1L (ENSOCUG00000015989) #14 ENSOCUG00000035144 NPC2 (ENSOCUG00000014067) #15 ISCA2 (ENSOCUG00000014072) #16 LTBP2 (ENSOCUG00000014077) #17 AREL1 (ENSOCUG00000014107) #18 ENSOCUG00000014120 #19 YLPM1 (ENSOCUG00000008083) #20 PROX2 (ENSOCUG00000021246) #21 DLST (ENSOCUG00000015606) #22 RPS6KL1 (ENSOCUG00000013819) #23 PGF (ENSOCUG00000026354) #24 EIF2B2 (ENSOCUG00000010175) #25 MLH3 (ENSOCUG00000010182) #26 ENSOCUG00000010190 ZC2HC1C (ENSOCUG00000010195) #28 NEK9 (ENSOCUG00000010201) #29 TMED10 (ENSOCUG00000004669) #30 FOS (ENSOCUG00000021506) #31 JDP2 (ENSOCUG00000008466) #32 BATF (ENSOCUG00000026625) #33 ERG28 (ENSOCUG00000016338) #36 FLVCR2 (ENSOCUG00000029538) #34 TTLL5 (ENSOCUG00000011399) #35 TGFB3 (ENSOCUG00000011415) Pika MODERN SPECIES 593 NPC2 (ENSOPRG00000011675) #15 ISCA2 (ENSOPRG00000011684) #16 LTBP2 (ENSOPRG00000011689) #17 AREL1 (ENSOPRG00000011748) #18 ENSOPRG00000018844 FCF1 (ENSOPRG00000011766) #19 YLPM1 (ENSOPRG00000011778) #20 PROX2 (ENSOPRG00000011820) #21 DLST (ENSOPRG00000011832) #22 RPS6KL1 (ENSOPRG00000011848) #23 PGF (ENSOPRG00000011869) #24 EIF2B2 (ENSOPRG00000011892) #25 MLH3 (ENSOPRG00000011908) #26 ENSOPRG00000011940 ENSOPRG00000011943 #28 NEK9 (ENSOPRG00000011956) #29 TMED10 (ENSOPRG00000011992) #30 FOS (ENSOPRG00000012005) #31 ENSOPRG00000012017 JDP2 (ENSOPRG00000012032) #32 BATF (ENSOPRG00000012041) #33 FLVCR2 (ENSOPRG00000012046) #34 ERG28 (ENSOPRG00000012066) #36 ENSOPRG00000012071 Rodentia ANCESTRAL SPECIES 3 ENSGT00390000016292.g.a.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Rodentia_A ANCESTRAL SPECIES 2 ENSGT00390000016292.g.a.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Hystricomorpha ANCESTRAL SPECIES 33 ENSGT00390000016292.g.a.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Hystricomorpha_a ANCESTRAL SPECIES 27 ENSGT00940000154427.A #8 ENSGT00390000016292.g.a.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Hystricomorpha_b ANCESTRAL SPECIES 46 ENSGT01100000263540.A.b #7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 Degu DUPLICATION Degu MODERN SPECIES 48 CCDC198 (ENSODEG00000015422) SLC35F4 (ENSODEG00000014001) ENSODEG00000014617 ENSODEG00000014244 ENSODEG00000014881 ENSODEG00000014309 ENSODEG00000014880 ENSODEG00000014925 DACT1 (ENSODEG00000014574) ENSODEG00000015435 DAAM1 (ENSODEG00000014128) L3HYPDH (ENSODEG00000015887) JKAMP (ENSODEG00000014669) ENSODEG00000014803 ENSODEG00000014970 ENSODEG00000020245 #22 ENSODEG00000020257 ENSODEG00000015513 ENSODEG00000014407 KTN1 (ENSODEG00000015972) ENSODEG00000020182 ENSODEG00000020193 TBPL2 (ENSODEG00000015283) ATG14 (ENSODEG00000014397) ENSODEG00000014741 ENSODEG00000014683 TTC9 (ENSODEG00000015092) ENSODEG00000020259 MAP3K9 (ENSODEG00000015307) PCNX1 (ENSODEG00000015239) SIPA1L1 (ENSODEG00000014862) Degu MODERN SPECIES 48 ENTPD5 (ENSODEG00000015910) #7 ENSODEG00000015055 #8 ALDH6A1 (ENSODEG00000015807) #9 ENSODEG00000015046 #10 VSX2 (ENSODEG00000015486) #11 ABCD4 (ENSODEG00000015190) #12 VRTN (ENSODEG00000015577) #13 SYNDIG1L (ENSODEG00000015191) #14 NPC2 (ENSODEG00000015454) #15 ENSODEG00000015593 #16 LTBP2 (ENSODEG00000015966) #17 AREL1 (ENSODEG00000015900) #18 ENSODEG00000015318 #19 YLPM1 (ENSODEG00000015362) #20 PROX2 (ENSODEG00000015273) #21 ENSODEG00000016718 #22 RPS6KL1 (ENSODEG00000015734) #23 ENSODEG00000015442 #25 ENSODEG00000015428 #26 ENSODEG00000015487 ZC2HC1C (ENSODEG00000015376) #28 NEK9 (ENSODEG00000015192) #29 TMED10 (ENSODEG00000015608) #30 FOS (ENSODEG00000015631) #31 ENSODEG00000015265 JDP2 (ENSODEG00000015424) #32 BATF (ENSODEG00000015516) #33 Long-tailed chinchilla MODERN SPECIES 230 ENTPD5 (ENSCLAG00000003418) #7 ENSCLAG00000003357 #8 ALDH6A1 (ENSCLAG00000003304) #9 LIN52 (ENSCLAG00000003236) #10 VSX2 (ENSCLAG00000006640) #11 ABCD4 (ENSCLAG00000006557) #12 VRTN (ENSCLAG00000006514) #13 SYNDIG1L (ENSCLAG00000006492) #14 NPC2 (ENSCLAG00000006435) #15 ISCA2 (ENSCLAG00000006410) #16 LTBP2 (ENSCLAG00000005951) #17 AREL1 (ENSCLAG00000005714) #18 FCF1 (ENSCLAG00000005606) #19 YLPM1 (ENSCLAG00000004848) #20 PROX2 (ENSCLAG00000004620) #21 DLST (ENSCLAG00000004328) #22 RPS6KL1 (ENSCLAG00000004091) #23 PGF (ENSCLAG00000003475) #24 EIF2B2 (ENSCLAG00000003404) #25 MLH3 (ENSCLAG00000003183) #26 ENSCLAG00000003079 ZC2HC1C (ENSCLAG00000003052) #28 NEK9 (ENSCLAG00000002894) #29 ENSCLAG00000017571 ENSCLAG00000005287 #30 FOS (ENSCLAG00000005234) #31 JDP2 (ENSCLAG00000005213) #32 BATF (ENSCLAG00000005182) #33 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 20 ENSCPOG00000015588 #8 RNF113A (ENSCPOG00000038517) ALDH6A1 (ENSCPOG00000000015) #9 LIN52 (ENSCPOG00000003170) #10 VSX2 (ENSCPOG00000003172) #11 ABCD4 (ENSCPOG00000004776) #12 VRTN (ENSCPOG00000038635) #13 SYNDIG1L (ENSCPOG00000012367) #14 NPC2 (ENSCPOG00000001141) #15 ISCA2 (ENSCPOG00000035413) #16 LTBP2 (ENSCPOG00000001143) #17 AREL1 (ENSCPOG00000001146) #18 ENSCPOG00000001149 #19 YLPM1 (ENSCPOG00000027568) #20 PROX2 (ENSCPOG00000009322) #21 ENSCPOG00000009316 #22 RPS6KL1 (ENSCPOG00000011776) #23 PGF (ENSCPOG00000038491) #24 EIF2B2 (ENSCPOG00000008155) #25 MLH3 (ENSCPOG00000024679) #26 ENSCPOG00000036680 ZC2HC1C (ENSCPOG00000003986) #28 NEK9 (ENSCPOG00000003990) #29 TMED10 (ENSCPOG00000004567) #30 FOS (ENSCPOG00000033284) #31 ENSCPOG00000039224 JDP2 (ENSCPOG00000037507) #32 BATF (ENSCPOG00000039637) #33 FLVCR2 (ENSCPOG00000005615) #34 ERG28 (ENSCPOG00000005620) #36 ENSCPOG00000005623 Guinea pig MODERN SPECIES 45 RALGAPB (ENSCPOG00000014009) LBP (ENSCPOG00000035746) ENSCPOG00000031388 KIAA1755 (ENSCPOG00000011907) TGM2 (ENSCPOG00000011896) RPRD1B (ENSCPOG00000012751) TTI1 (ENSCPOG00000012750) VSTM2L (ENSCPOG00000022727) CTNNBL1 (ENSCPOG00000010269) ENSCPOG00000025309 BLCAP (ENSCPOG00000032938) SRC (ENSCPOG00000011012) MANBAL (ENSCPOG00000038554) GHRH (ENSCPOG00000020252) RPN2 (ENSCPOG00000039305) ENSCPOG00000025525 #22 MROH8 (ENSCPOG00000001344) RBL1 (ENSCPOG00000001340) SAMHD1 (ENSCPOG00000007987) TLDC2 (ENSCPOG00000039225) SOGA1 (ENSCPOG00000011453) DSN1 (ENSCPOG00000011447) NDRG3 (ENSCPOG00000011441) SLA2 (ENSCPOG00000011437) RAB5IF (ENSCPOG00000037783) TGIF2 (ENSCPOG00000038949) MYL9 (ENSCPOG00000036032) DLGAP4 (ENSCPOG00000013418) AAR2 (ENSCPOG00000012252) EPB41L1 (ENSCPOG00000012245) CNBD2 (ENSCPOG00000014556) Naked mole-rat female MODERN SPECIES 18 ENSHGLG00000045022 ALDH6A1 (ENSHGLG00000008121) #9 LIN52 (ENSHGLG00000045214) #10 VSX2 (ENSHGLG00000010609) #11 ABCD4 (ENSHGLG00000019040) #12 SYNDIG1L (ENSHGLG00000013920) #14 NPC2 (ENSHGLG00000013107) #15 ISCA2 (ENSHGLG00000049377) #16 LTBP2 (ENSHGLG00000015861) #17 ENSHGLG00000047171 AREL1 (ENSHGLG00000018582) #18 ENSHGLG00000017869 ##19 YLPM1 (ENSHGLG00000018654) #20 ENSHGLG00000046547 PROX2 (ENSHGLG00000011710) #21 DLST (ENSHGLG00000009814) #22 RPS6KL1 (ENSHGLG00000013483) #23 ENSHGLG00000013243 ENSHGLG00000018678 #24 ENSHGLG00000050804 EIF2B2 (ENSHGLG00000016520) #25 MLH3 (ENSHGLG00000015005) #26 ENSHGLG00000040406 ENSHGLG00000014222 ZC2HC1C (ENSHGLG00000012165) #28 ENSHGLG00000011281 #29 TMED10 (ENSHGLG00000009862) #30 Fos (ENSHGLG00000009642) #31 ENSHGLG00000012043 JDP2 (ENSHGLG00000046590) #32 ENSHGLG00000034007 Sciuridae ANCESTRAL SPECIES 8 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402.f #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.g ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Eurasian red squirrel MODERN SPECIES 11 ALDH6A1 (ENSSVLG00005005600) #9 ENSSVLG00005005569 ENSSVLG00005005534 #10 VSX2 (ENSSVLG00005005496) #11 ABCD4 (ENSSVLG00005005450) #12 VRTN (ENSSVLG00005005435) #13 SYNDIG1L (ENSSVLG00005005404) #14 NPC2 (ENSSVLG00005005374) #15 ISCA2 (ENSSVLG00005005331) #16 LTBP2 (ENSSVLG00005023777) #17 ENSSVLG00005023700 AREL1 (ENSSVLG00005023654) #18 FCF1 (ENSSVLG00005023579) #19 YLPM1 (ENSSVLG00005023475) #20 ENSSVLG00005023416 #21 DLST (ENSSVLG00005023360) #22 RPS6KL1 (ENSSVLG00005023325) #23 PGF (ENSSVLG00005023268) #24 EIF2B2 (ENSSVLG00005023236) #25 MLH3 (ENSSVLG00005023158) #26 ENSSVLG00005023086 ZC2HC1C (ENSSVLG00005023028) #28 NEK9 (ENSSVLG00005022971) #29 TMED10 (ENSSVLG00005022941) #30 FOS (ENSSVLG00005022864) #31 JDP2 (ENSSVLG00005022819) #32 BATF (ENSSVLG00005022782) #33 ERG28 (ENSSVLG00005022750) #36 FLVCR2 (ENSSVLG00005022704) #34 TTLL5 (ENSSVLG00005022638) #35 TGFB3 (ENSSVLG00005022514) Marmotini ANCESTRAL SPECIES 27 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402.f #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.g ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Alpin marmot MODERN SPECIES 1 BBOF1 (ENSMMMG00000016213) #8 ALDH6A1 (ENSMMMG00000016229) #9 LIN52 (ENSMMMG00000016244) #10 VSX2 (ENSMMMG00000016247) #11 ABCD4 (ENSMMMG00000016264) #12 VRTN (ENSMMMG00000016304) #13 SYNDIG1L (ENSMMMG00000016305) #14 NPC2 (ENSMMMG00000016316) #15 ISCA2 (ENSMMMG00000016320) #16 LTBP2 (ENSMMMG00000016333) #17 AREL1 (ENSMMMG00000016543) #18 FCF1 (ENSMMMG00000016553) #19 YLPM1 (ENSMMMG00000016573) #20 ENSMMMG00000018793 PROX2 (ENSMMMG00000018802) #21 DLST (ENSMMMG00000018811) #22 RPS6KL1 (ENSMMMG00000018824) #23 ENSMMMG00000018834 #24 EIF2B2 (ENSMMMG00000018871) #25 MLH3 (ENSMMMG00000018877) #26 ENSMMMG00000018919 ZC2HC1C (ENSMMMG00000018927) #28 NEK9 (ENSMMMG00000018929) #29 TMED10 (ENSMMMG00000018955) #30 FOS (ENSMMMG00000018959) #31 JDP2 (ENSMMMG00000018991) #32 BATF (ENSMMMG00000018997) #33 FLVCR2 (ENSMMMG00000019011) #34 ERG28 (ENSMMMG00000019015) #36 ENSMMMG00000019046 TGFB3 (ENSMMMG00000019151) Marmotini_b ANCESTRAL SPECIES 31 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402.f #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.g.a ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Arctic ground squirrel MODERN SPECIES 8 BBOF1 (ENSUPAG00010014608) #8 ALDH6A1 (ENSUPAG00010014582) #9 LIN52 (ENSUPAG00010014569) #10 VSX2 (ENSUPAG00010014562) #11 ABCD4 (ENSUPAG00010014503) #12 VRTN (ENSUPAG00010014491) #13 SYNDIG1L (ENSUPAG00010014486) #14 NPC2 (ENSUPAG00010014477) #15 ISCA2 (ENSUPAG00010014470) #16 LTBP2 (ENSUPAG00010014320) #17 ENSUPAG00010014316 AREL1 (ENSUPAG00010014265) #18 ENSUPAG00010014237 #19 YLPM1 (ENSUPAG00010014207) #20 PROX2 (ENSUPAG00010014197) #21 DLST (ENSUPAG00010014158) #22 RPS6KL1 (ENSUPAG00010014140) #23 PGF (ENSUPAG00010014126) #24 EIF2B2 (ENSUPAG00010014118) #25 MLH3 (ENSUPAG00010014100) #26 ENSUPAG00010014073 ZC2HC1C (ENSUPAG00010014064) #28 NEK9 (ENSUPAG00010014023) #29 TMED10 (ENSUPAG00010014006) #30 FOS (ENSUPAG00010013998) #31 JDP2 (ENSUPAG00010013987) #32 ENSUPAG00010013983 BATF (ENSUPAG00010013971) #33 FLVCR2 (ENSUPAG00010013953) #34 ERG28 (ENSUPAG00010013948) #36 ENSUPAG00010013566 Squirrel MODERN SPECIES 88 ENSSTOG00000008087 #8 ALDH6A1 (ENSSTOG00000028534) #9 LIN52 (ENSSTOG00000029773) #10 VSX2 (ENSSTOG00000008114) #11 ABCD4 (ENSSTOG00000009827) #12 VRTN (ENSSTOG00000021434) #13 SYNDIG1L (ENSSTOG00000007981) #14 NPC2 (ENSSTOG00000007987) #15 ISCA2 (ENSSTOG00000020219) #16 LTBP2 (ENSSTOG00000007996) #17 ENSSTOG00000034311 AREL1 (ENSSTOG00000008036) #18 FCF1 (ENSSTOG00000008083) #19 YLPM1 (ENSSTOG00000014581) #20 PROX2 (ENSSTOG00000023253) #21 DLST (ENSSTOG00000014603) #22 RPS6KL1 (ENSSTOG00000014613) #23 PGF (ENSSTOG00000023041) #24 EIF2B2 (ENSSTOG00000007283) #25 MLH3 (ENSSTOG00000027479) #26 ENSSTOG00000007327 ZC2HC1C (ENSSTOG00000007331) #28 NEK9 (ENSSTOG00000007339) #29 ENSSTOG00000007392 #30 FOS (ENSSTOG00000003005) #31 JDP2 (ENSSTOG00000026831) #32 BATF (ENSSTOG00000024626) #33 FLVCR2 (ENSSTOG00000014389) #34 ERG28 (ENSSTOG00000014394) #36 TTLL5 (ENSSTOG00000014397) #35 TGFB3 (ENSSTOG00000028492) Rodentia_B ANCESTRAL SPECIES 7 ENSGT00390000016292.g.a.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Kangaroo rat MODERN SPECIES 321 ENSDORG00000001878 #7 Rnf113a2 (ENSDORG00000027624) ENSDORG00000005218 #8 Aldh6a1 (ENSDORG00000005224) #9 Lin52 (ENSDORG00000025156) #10 Vsx2 (ENSDORG00000010911) #11 Abcd4 (ENSDORG00000010912) #12 Vrtn (ENSDORG00000010914) #13 Syndig1l (ENSDORG00000014474) #14 Isca2 (ENSDORG00000027372) #16 Ltbp2 (ENSDORG00000014858) #17 Arel1 (ENSDORG00000027985) #18 Fcf1 (ENSDORG00000009970) #19 Ylpm1 (ENSDORG00000016716) #20 Prox2 (ENSDORG00000027296) #21 Dlst (ENSDORG00000002153) #22 Rps6kl1 (ENSDORG00000002155) #23 Pgf (ENSDORG00000029841) #24 ENSDORG00000004893 #26 Acyp1 (ENSDORG00000029459) Zc2hc1c (ENSDORG00000004895) #28 Nek9 (ENSDORG00000004896) #29 Tmed10 (ENSDORG00000012999) #30 Fos (ENSDORG00000024479) #31 Jdp2 (ENSDORG00000026956) #32 Batf (ENSDORG00000026541) #33 Flvcr2 (ENSDORG00000012890) #34 Erg28 (ENSDORG00000012893) #36 ENSDORG00000012894 #35 Tgfb3 (ENSDORG00000012897) Ift43 (ENSDORG00000012899) #37 Myomorpha ANCESTRAL SPECIES 7 ENSGT00390000016292.g.a.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Muroidea ANCESTRAL SPECIES 16 ENSGT00390000016292.g.a.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Muroidea_A ANCESTRAL SPECIES 15 ENSGT00390000016292.g.a.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Cricetidae ANCESTRAL SPECIES 17 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.g.a #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Cricetinae ANCESTRAL SPECIES 11 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.g.a #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Golden Hamster MODERN SPECIES 835 Bbof1 (ENSMAUG00000012362) #8 Aldh6a1 (ENSMAUG00000016891) #9 Lin52 (ENSMAUG00000011456) #10 Vsx2 (ENSMAUG00000017695) #11 Abcd4 (ENSMAUG00000011789) #12 ENSMAUG00000017258 #13 Syndig1l (ENSMAUG00000013945) #14 Npc2 (ENSMAUG00000020689) #15 Isca2 (ENSMAUG00000019928) #16 ENSMAUG00000017408 Ltbp2 (ENSMAUG00000015694) #17 ENSMAUG00000003058 #18 Fcf1 (ENSMAUG00000014155) #19 Ylpm1 (ENSMAUG00000000879) #20 Prox2 (ENSMAUG00000008593) #21 Dlst (ENSMAUG00000000864) #22 Rps6kl1 (ENSMAUG00000010833) #23 Pgf (ENSMAUG00000000890) #24 Eif2b2 (ENSMAUG00000015945) #25 ENSMAUG00000000844 #26 Acyp1 (ENSMAUG00000000122) Zc2hc1c (ENSMAUG00000014144) #28 Nek9 (ENSMAUG00000000574) #29 Tmed10 (ENSMAUG00000017571) #30 Fos (ENSMAUG00000019419) #31 Jdp2 (ENSMAUG00000014923) #32 Batf (ENSMAUG00000006835) #33 Flvcr2 (ENSMAUG00000016727) #34 Erg28 (ENSMAUG00000011568) #36 ENSMAUG00000011196 Chinese hamster chok1gshd MODERN SPECIES 2 Aldh6a1 (ENSCGRG00001024154) #9 Lin52 (ENSCGRG00001023668) #10 Vsx2 (ENSCGRG00001023191) #11 Abcd4 (ENSCGRG00001022187) #12 Vrtn (ENSCGRG00001013127) #13 Syndig1l (ENSCGRG00001013830) #14 Npc2 (ENSCGRG00001012790) #15 Isca2 (ENSCGRG00001010257) #16 Ltbp2 (ENSCGRG00001012474) #17 ENSCGRG00001003181 ENSCGRG00001000601 Arel1 (ENSCGRG00001023498) #18 ENSCGRG00001017796 #19 Ylpm1 (ENSCGRG00001015671) #20 Prox2 (ENSCGRG00001021630) #21 Dlst (ENSCGRG00001020056) #22 Rps6kl1 (ENSCGRG00001024635) #23 Pgf (ENSCGRG00001023393) #24 Eif2b2 (ENSCGRG00001019280) #25 Mlh3 (ENSCGRG00001018094) #26 Acyp1 (ENSCGRG00001021281) Zc2hc1c (ENSCGRG00001022271) #28 Nek9 (ENSCGRG00001020024) #29 Tmed10 (ENSCGRG00001009122) #30 Fos (ENSCGRG00001006758) #31 Jdp2 (ENSCGRG00001014531) #32 Batf (ENSCGRG00001012598) #33 Flvcr2 (ENSCGRG00001011591) #34 Erg28 (ENSCGRG00001009404) #36 Ttll5 (ENSCGRG00001012708) Tgfb3 (ENSCGRG00001009726) Cricetidae_B ANCESTRAL SPECIES 18 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00910000147973 ENSGT00940000156723 #18 ENSGT00940000153117.B.d.g.a #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Prairie vole MODERN SPECIES Entpd5 (ENSMOCG00000020144) #7 Bbof1 (ENSMOCG00000001378) #8 Aldh6a1 (ENSMOCG00000018307) #9 Lin52 (ENSMOCG00000017855) #10 Vsx2 (ENSMOCG00000020119) #11 Abcd4 (ENSMOCG00000022046) #12 Vrtn (ENSMOCG00000011795) #13 Syndig1l (ENSMOCG00000013518) #14 Npc2 (ENSMOCG00000013949) #15 Isca2 (ENSMOCG00000000566) #16 Ltbp2 (ENSMOCG00000007456) #17 Arel1 (ENSMOCG00000014662) #18 ENSMOCG00000001860 #19 Ylpm1 (ENSMOCG00000022334) #20 Prox2 (ENSMOCG00000019247) #21 Dlst (ENSMOCG00000022960) #22 Rps6kl1 (ENSMOCG00000020851) #23 ENSMOCG00000002159 Pgf (ENSMOCG00000002312) #24 Eif2b2 (ENSMOCG00000003698) #25 ENSMOCG00000006235 #26 Acyp1 (ENSMOCG00000013303) Zc2hc1c (ENSMOCG00000003376) #28 Nek9 (ENSMOCG00000007711) #29 Tmed10 (ENSMOCG00000022712) #30 Fos (ENSMOCG00000000968) #31 Jdp2 (ENSMOCG00000002176) #32 Batf (ENSMOCG00000014949) #33 Flvcr2 (ENSMOCG00000002645) #34 Erg28 (ENSMOCG00000013099) #36 ENSMOCG00000018205 Northern American deer mouse MODERN SPECIES 5 Bbof1 (ENSPEMG00000020680) #8 Aldh6a1 (ENSPEMG00000021209) #9 Lin52 (ENSPEMG00000016158) #10 Vsx2 (ENSPEMG00000014515) #11 Abcd4 (ENSPEMG00000021386) #12 Vrtn (ENSPEMG00000020660) #13 Syndig1l (ENSPEMG00000030499) #14 Npc2 (ENSPEMG00000030688) #15 Isca2 (ENSPEMG00000028312) #16 Ltbp2 (ENSPEMG00000015484) #17 ENSPEMG00000029842 Arel1 (ENSPEMG00000020566) #18 Fcf1 (ENSPEMG00000012596) #19 Ylpm1 (ENSPEMG00000020843) #20 Prox2 (ENSPEMG00000020502) #21 Dlst (ENSPEMG00000009929) #22 Rps6kl1 (ENSPEMG00000011503) #23 Pgf (ENSPEMG00000017060) #24 Eif2b2 (ENSPEMG00000007004) #25 Mlh3 (ENSPEMG00000005719) #26 Acyp1 (ENSPEMG00000010196) Zc2hc1c (ENSPEMG00000000113) #28 Nek9 (ENSPEMG00000016848) #29 ENSPEMG00000001102 #30 Fos (ENSPEMG00000025669) #31 Jdp2 (ENSPEMG00000027096) #32 Batf (ENSPEMG00000026240) #33 Flvcr2 (ENSPEMG00000021330) #34 Erg28 (ENSPEMG00000022195) #36 Ttll5 (ENSPEMG00000011267) Tgfb3 (ENSPEMG00000023520) Murinae ANCESTRAL SPECIES 8 ENSGT00390000016292.g.a.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Mus ANCESTRAL SPECIES 10 ENSGT00390000016292.g.a.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Mus_A ANCESTRAL SPECIES 17 ENSGT00390000016292.g.a.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Mus_B ANCESTRAL SPECIES 17 ENSGT00390000016292.g.a.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Mouse MODERN SPECIES 3 Bbof1 (ENSMUSG00000057265) #8 Rnf113a2 (ENSMUSG00000098134) Aldh6a1 (ENSMUSG00000021238) #9 Lin52 (ENSMUSG00000085793) #10 Vsx2 (ENSMUSG00000021239) #11 Abcd4 (ENSMUSG00000021240) #12 Vrtn (ENSMUSG00000071235) #13 Syndig1l (ENSMUSG00000071234) #14 Npc2 (ENSMUSG00000021242) #15 Isca2 (ENSMUSG00000021241) #16 Ltbp2 (ENSMUSG00000002020) #17 Arel1 (ENSMUSG00000042350) #18 Fcf1 (ENSMUSG00000021243) #19 Ylpm1 (ENSMUSG00000021244) #20 Prox2 (ENSMUSG00000042320) #21 Dlst (ENSMUSG00000004789) #22 Rps6kl1 (ENSMUSG00000019235) #23 Pgf (ENSMUSG00000004791) #24 Eif2b2 (ENSMUSG00000004788) #25 Mlh3 (ENSMUSG00000021245) #26 Acyp1 (ENSMUSG00000008822) Zc2hc1c (ENSMUSG00000045064) #28 Nek9 (ENSMUSG00000034290) #29 Tmed10 (ENSMUSG00000021248) #30 Fos (ENSMUSG00000021250) #31 Jdp2 (ENSMUSG00000034271) #32 Batf (ENSMUSG00000034266) #33 Flvcr2 (ENSMUSG00000034258) #34 Erg28 (ENSMUSG00000021252) #36 Ttll5 (ENSMUSG00000012609) Tgfb3 (ENSMUSG00000021253) Mus_C ANCESTRAL SPECIES 11 ENSGT00390000016292.g.a.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Steppe mouse MODERN SPECIES 3303 Bbof1 (ENSMSIG00000003750) #8 Aldh6a1 (ENSMSIG00000003829) #9 ENSMSIG00000003864 #10 Vsx2 (ENSMSIG00000003898) #11 Abcd4 (ENSMSIG00000003952) #12 Vrtn (ENSMSIG00000004123) #13 ENSMSIG00000004137 #14 Npc2 (ENSMSIG00000004195) #15 Isca2 (ENSMSIG00000004207) #16 Ltbp2 (ENSMSIG00000004256) #17 ENSMSIG00000004608 Arel1 (ENSMSIG00000004619) #18 ENSMSIG00000004690 #19 Ylpm1 (ENSMSIG00000004817) #20 Prox2 (ENSMSIG00000005003) #21 Dlst (ENSMSIG00000005032) #22 Rps6kl1 (ENSMSIG00000005067) #23 Pgf (ENSMSIG00000005142) #24 spretus MODERN SPECIES 3 Rnf113a2 (MGP_SPRETEiJ_G0018788) Aldh6a1 (MGP_SPRETEiJ_G0018789) #9 MGP_SPRETEiJ_G0018790 #10 Vsx2 (MGP_SPRETEiJ_G0018791) #11 Abcd4 (MGP_SPRETEiJ_G0018792) #12 Vrtn (MGP_SPRETEiJ_G0018793) #13 Syndig1l (MGP_SPRETEiJ_G0018794) #14 Npc2 (MGP_SPRETEiJ_G0018795) #15 Isca2 (MGP_SPRETEiJ_G0018796) #16 Ltbp2 (MGP_SPRETEiJ_G0018797) #17 MGP_SPRETEiJ_G0018798 MGP_SPRETEiJ_G0018799 #18 Fcf1 (MGP_SPRETEiJ_G0018800) #19 Ylpm1 (MGP_SPRETEiJ_G0018801) #20 Prox2 (MGP_SPRETEiJ_G0018802) #21 Dlst (MGP_SPRETEiJ_G0018803) #22 Rps6kl1 (MGP_SPRETEiJ_G0018804) #23 Pgf (MGP_SPRETEiJ_G0018805) #24 Eif2b2 (MGP_SPRETEiJ_G0018806) #25 Mlh3 (MGP_SPRETEiJ_G0018807) #26 Acyp1 (MGP_SPRETEiJ_G0018808) Zc2hc1c (MGP_SPRETEiJ_G0018809) #28 Nek9 (MGP_SPRETEiJ_G0018810) #29 MGP_SPRETEiJ_G0018811 #30 MGP_SPRETEiJ_G0018812 Fos (MGP_SPRETEiJ_G0018813) #31 Jdp2 (MGP_SPRETEiJ_G0018814) #32 Batf (MGP_SPRETEiJ_G0018815) #33 Flvcr2 (MGP_SPRETEiJ_G0018816) #34 Erg28 (MGP_SPRETEiJ_G0018817) #36 Ttll5 (MGP_SPRETEiJ_G0018818) Ryukyu mouse MODERN SPECIES 3 Rnf113a2 (MGP_CAROLIEiJ_G0017943) Aldh6a1 (MGP_CAROLIEiJ_G0017944) #9 MGP_CAROLIEiJ_G0017945 #10 Vsx2 (MGP_CAROLIEiJ_G0017946) #11 Abcd4 (MGP_CAROLIEiJ_G0017947) #12 Vrtn (MGP_CAROLIEiJ_G0017948) #13 Syndig1l (MGP_CAROLIEiJ_G0017949) #14 Npc2 (MGP_CAROLIEiJ_G0017950) #15 Isca2 (MGP_CAROLIEiJ_G0017951) #16 Ltbp2 (MGP_CAROLIEiJ_G0017952) #17 MGP_CAROLIEiJ_G0017953 Arel1 (MGP_CAROLIEiJ_G0017954) #18 Fcf1 (MGP_CAROLIEiJ_G0017955) #19 Ylpm1 (MGP_CAROLIEiJ_G0017956) #20 Prox2 (MGP_CAROLIEiJ_G0017957) #21 Dlst (MGP_CAROLIEiJ_G0017958) #22 Rps6kl1 (MGP_CAROLIEiJ_G0017959) #23 Pgf (MGP_CAROLIEiJ_G0017960) #24 Eif2b2 (MGP_CAROLIEiJ_G0017961) #25 Mlh3 (MGP_CAROLIEiJ_G0017962) #26 Acyp1 (MGP_CAROLIEiJ_G0017963) Zc2hc1c (MGP_CAROLIEiJ_G0017964) #28 Nek9 (MGP_CAROLIEiJ_G0017965) #29 Tmed10 (MGP_CAROLIEiJ_G0017966) #30 Fos (MGP_CAROLIEiJ_G0017967) #31 Jdp2 (MGP_CAROLIEiJ_G0017968) #32 Batf (MGP_CAROLIEiJ_G0017969) #33 Flvcr2 (MGP_CAROLIEiJ_G0017970) #34 Erg28 (MGP_CAROLIEiJ_G0017971) #36 Ttll5 (MGP_CAROLIEiJ_G0017972) Tgfb3 (MGP_CAROLIEiJ_G0017973) Shrew mouse MODERN SPECIES 20 Rnf113a2 (MGP_PahariEiJ_G0029702) Aldh6a1 (MGP_PahariEiJ_G0029703) #9 MGP_PahariEiJ_G0029704 #10 Vsx2 (MGP_PahariEiJ_G0029705) #11 Abcd4 (MGP_PahariEiJ_G0029706) #12 Vrtn (MGP_PahariEiJ_G0029707) #13 Syndig1l (MGP_PahariEiJ_G0029708) #14 Npc2 (MGP_PahariEiJ_G0029709) #15 Isca2 (MGP_PahariEiJ_G0029710) #16 Ltbp2 (MGP_PahariEiJ_G0029711) #17 MGP_PahariEiJ_G0029712 MGP_PahariEiJ_G0029713 #18 Fcf1 (MGP_PahariEiJ_G0029714) #19 Ylpm1 (MGP_PahariEiJ_G0029715) #20 Prox2 (MGP_PahariEiJ_G0029716) #21 Dlst (MGP_PahariEiJ_G0029717) #22 Rps6kl1 (MGP_PahariEiJ_G0029718) #23 Pgf (MGP_PahariEiJ_G0029719) #24 Eif2b2 (MGP_PahariEiJ_G0029720) #25 Mlh3 (MGP_PahariEiJ_G0029721) #26 Acyp1 (MGP_PahariEiJ_G0029722) Zc2hc1c (MGP_PahariEiJ_G0029723) #28 Nek9 (MGP_PahariEiJ_G0029724) #29 Tmed10 (MGP_PahariEiJ_G0029725) #30 Fos (MGP_PahariEiJ_G0029726) #31 Jdp2 (MGP_PahariEiJ_G0029727) #32 Batf (MGP_PahariEiJ_G0029728) #33 Flvcr2 (MGP_PahariEiJ_G0029729) #34 Erg28 (MGP_PahariEiJ_G0029730) #36 Ttll5 (MGP_PahariEiJ_G0029731) Tgfb3 (MGP_PahariEiJ_G0029732) Rat MODERN SPECIES 16 Rnf113a2 (ENSRNOG00000067995) Aldh6a1 (ENSRNOG00000011419) #9 Lin52 (ENSRNOG00000043441) #10 Vsx2 (ENSRNOG00000011918) #11 Abcd4 (ENSRNOG00000011964) #12 Vrtn (ENSRNOG00000048378) #13 Syndig1l (ENSRNOG00000027645) #14 Npc2 (ENSRNOG00000012062) #15 Isca2 (ENSRNOG00000012085) #16 Ltbp2 (ENSRNOG00000012094) #17 Arel1 (ENSRNOG00000004382) #18 Fcf1 (ENSRNOG00000004723) #19 Ylpm1 (ENSRNOG00000027317) #20 Lsm5 (ENSRNOG00000027305) Prox2 (ENSRNOG00000005054) #21 Dlst (ENSRNOG00000005061) #22 Rps6kl1 (ENSRNOG00000005530) #23 Pgf (ENSRNOG00000005650) #24 Eif2b2 (ENSRNOG00000006467) #25 Mlh3 (ENSRNOG00000006699) #26 Acyp1 (ENSRNOG00000006744) Zc2hc1c (ENSRNOG00000027115) #28 Nek9 (ENSRNOG00000058572) #29 Tmed10 (ENSRNOG00000007901) #30 Fos (ENSRNOG00000008015) #31 Jdp2 (ENSRNOG00000063964) #32 Batf (ENSRNOG00000008588) #33 Flvcr2 (ENSRNOG00000008754) #34 Erg28 (ENSRNOG00000008781) #36 Ttll5 (ENSRNOG00000009318) Tgfb3 (ENSRNOG00000009867) Upper Galilee mountains blind mole rat MODERN SPECIES 1502 Coq6 (ENSNGAG00000015962) Entpd5 (ENSNGAG00000011773) #7 Bbof1 (ENSNGAG00000013123) #8 Aldh6a1 (ENSNGAG00000000245) #9 Lin52 (ENSNGAG00000014697) #10 Vsx2 (ENSNGAG00000011608) #11 Abcd4 (ENSNGAG00000017662) #12 Syndig1l (ENSNGAG00000013742) #14 Npc2 (ENSNGAG00000012246) #15 ENSNGAG00000001197 Ltbp2 (ENSNGAG00000019830) #17 Arel1 (ENSNGAG00000013039) #18 Fcf1 (ENSNGAG00000004711) #19 Ylpm1 (ENSNGAG00000013855) #20 Prox2 (ENSNGAG00000019326) #21 Dlst (ENSNGAG00000012679) #22 Rps6kl1 (ENSNGAG00000013728) #23 Pgf (ENSNGAG00000000539) #24 Eif2b2 (ENSNGAG00000012270) #25 Mlh3 (ENSNGAG00000014700) #26 Acyp1 (ENSNGAG00000007984) Zc2hc1c (ENSNGAG00000019419) #28 Nek9 (ENSNGAG00000017456) #29 Tmed10 (ENSNGAG00000011251) #30 Fos (ENSNGAG00000009761) #31 Jdp2 (ENSNGAG00000001677) #32 Batf (ENSNGAG00000020639) #33 Flvcr2 (ENSNGAG00000016955) #34 Erg28 (ENSNGAG00000011973) #36 ENSNGAG00000000162 Lesser Egyptian jerboa MODERN SPECIES 41 Bbof1 (ENSJJAG00000012977) #8 Aldh6a1 (ENSJJAG00000005519) #9 ENSJJAG00000015460 #10 Vsx2 (ENSJJAG00000011877) #11 Abcd4 (ENSJJAG00000014302) #12 Vrtn (ENSJJAG00000008057) #13 Syndig1l (ENSJJAG00000012505) #14 Npc2 (ENSJJAG00000017648) #15 Isca2 (ENSJJAG00000015802) #16 Ltbp2 (ENSJJAG00000016908) #17 ENSJJAG00000011505 Arel1 (ENSJJAG00000023937) #18 Fcf1 (ENSJJAG00000015320) #19 Ylpm1 (ENSJJAG00000017599) #20 Prox2 (ENSJJAG00000017786) #21 Dlst (ENSJJAG00000016242) #22 Rps6kl1 (ENSJJAG00000013675) #23 Pgf (ENSJJAG00000017768) #24 Eif2b2 (ENSJJAG00000015912) #25 ENSJJAG00000017233 #26 Acyp1 (ENSJJAG00000011511) Zc2hc1c (ENSJJAG00000011295) #28 Nek9 (ENSJJAG00000009859) #29 ENSJJAG00000016452 #30 ENSJJAG00000011402 Fos (ENSJJAG00000007870) #31 Jdp2 (ENSJJAG00000010927) #32 Batf (ENSJJAG00000008958) #33 Flvcr2 (ENSJJAG00000012474) #34 Erg28 (ENSJJAG00000016443) #36 ENSJJAG00000012936 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00990000207089 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00530000064848 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00990000207089 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162910 Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00530000064848 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Carnivora ANCESTRAL SPECIES ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Caniformia ANCESTRAL SPECIES 15 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.b ##19 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Canidae ANCESTRAL SPECIES 4 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223.q #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00670000098076.ab ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.e ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Canis_lupus ANCESTRAL SPECIES 8 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223.q #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00670000098076.ab ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B.e ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000163712 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162910 Dingo MODERN SPECIES 161 ENTPD5 (ENSCAFG00020004058) #7 BBOF1 (ENSCAFG00020004003) #8 ALDH6A1 (ENSCAFG00020003666) #9 LIN52 (ENSCAFG00020003644) #10 VSX2 (ENSCAFG00020003629) #11 ENSCAFG00020003625 #12 ENSCAFG00020003619 #12 VRTN (ENSCAFG00020003595) #13 ENSCAFG00020003586 #15 ISCA2 (ENSCAFG00020003579) #16 LTBP2 (ENSCAFG00020003464) #17 AREL1 (ENSCAFG00020003085) #18 ENSCAFG00020003053 YLPM1 (ENSCAFG00020002557) #20 PROX2 (ENSCAFG00020002501) #21 DLST (ENSCAFG00020002488) #22 RPS6KL1 (ENSCAFG00020002467) #23 PGF (ENSCAFG00020002459) #24 EIF2B2 (ENSCAFG00020002450) #25 MLH3 (ENSCAFG00020002443) #26 ENSCAFG00020002438 ZC2HC1C (ENSCAFG00020002433) #28 NEK9 (ENSCAFG00020002125) #29 TMED10 (ENSCAFG00020002100) #30 ENSCAFG00020002090 FOS (ENSCAFG00020002082) #31 JDP2 (ENSCAFG00020002072) #32 BATF (ENSCAFG00020002062) #33 ENSCAFG00020002058 FLVCR2 (ENSCAFG00020002054) #34 ERG28 (ENSCAFG00020002048) #36 Dog MODERN SPECIES 36 ALDH6A1 (ENSCAFG00845013992) #9 LIN52 (ENSCAFG00845014059) #10 VSX2 (ENSCAFG00845014112) #11 ENSCAFG00845014165 #12 ENSCAFG00845014218 ENSCAFG00845014241 #13 ENSCAFG00845014257 #14 NPC2 (ENSCAFG00845014286) #15 ISCA2 (ENSCAFG00845014307) #16 LTBP2 (ENSCAFG00845014362) #17 AREL1 (ENSCAFG00845014520) #18 FCF1 (ENSCAFG00845014562) #19 YLPM1 (ENSCAFG00845014628) #20 ENSCAFG00845014672 ENSCAFG00845014690 #21 DLST (ENSCAFG00845014735) #22 RPS6KL1 (ENSCAFG00845014807) #23 ENSCAFG00845014841 #24 EIF2B2 (ENSCAFG00845014894) #25 MLH3 (ENSCAFG00845014944) #26 ACYP1 (ENSCAFG00845015059) ZC2HC1C (ENSCAFG00845015123) #28 NEK9 (ENSCAFG00845015171) #29 TMED10 (ENSCAFG00845015221) #30 ENSCAFG00845015259 FOS (ENSCAFG00845015304) #31 JDP2 (ENSCAFG00845015414) #32 BATF (ENSCAFG00845015458) #33 FLVCR2 (ENSCAFG00845015506) #34 ENSCAFG00845015573 #36 TTLL5 (ENSCAFG00845015662) #35 Red fox MODERN SPECIES 71 BBOF1 (ENSVVUG00000004994) #8 ALDH6A1 (ENSVVUG00000005031) #9 LIN52 (ENSVVUG00000005034) #10 VSX2 (ENSVVUG00000005042) #11 ABCD4 (ENSVVUG00000005058) #12 VRTN (ENSVVUG00000005086) #13 SYNDIG1L (ENSVVUG00000005089) #14 NPC2 (ENSVVUG00000005100) #15 ISCA2 (ENSVVUG00000005108) #16 LTBP2 (ENSVVUG00000005123) #17 ENSVVUG00000005169 AREL1 (ENSVVUG00000005173) #18 YLPM1 (ENSVVUG00000005181) #20 ENSVVUG00000005198 PROX2 (ENSVVUG00000005203) #21 DLST (ENSVVUG00000005214) #22 RPS6KL1 (ENSVVUG00000005216) #23 PGF (ENSVVUG00000005220) #24 ENSVVUG00000005229 #25 MLH3 (ENSVVUG00000005236) #26 ENSVVUG00000005257 ZC2HC1C (ENSVVUG00000005265) #28 NEK9 (ENSVVUG00000005288) #29 TMED10 (ENSVVUG00000005652) #30 FOS (ENSVVUG00000005656) #31 JDP2 (ENSVVUG00000005661) #32 BATF (ENSVVUG00000005666) #33 FLVCR2 (ENSVVUG00000005669) #34 ENSVVUG00000005675 ERG28 (ENSVVUG00000005717) #36 TTLL5 (ENSVVUG00000005760) #35 Caniformia_b ANCESTRAL SPECIES 14 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Mustelinae ANCESTRAL SPECIES 14 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 American mink MODERN SPECIES CN045 (ENSNVIG00000016193) #8 ALDH6A1 (ENSNVIG00000016166) #9 ENSNVIG00000016153 #10 VSX2 (ENSNVIG00000016140) #11 ABCD4 (ENSNVIG00000016067) #12 VRTN (ENSNVIG00000016057) #13 SYNDIG1L (ENSNVIG00000016048) #14 NPC2 (ENSNVIG00000016016) #15 ISCA2 (ENSNVIG00000015997) #16 LTBP2 (ENSNVIG00000015855) #17 ENSNVIG00000015839 K0317 (ENSNVIG00000015832) #18 FCF1 (ENSNVIG00000015797) ##19 YLPM1 (ENSNVIG00000015689) #20 ENSNVIG00000015674 #21 DLST (ENSNVIG00000015642) #22 RPS6KL1 (ENSNVIG00000015611) #23 PGF (ENSNVIG00000015578) #24 ENSNVIG00000015550 #25 MLH3 (ENSNVIG00000015467) #26 ENSNVIG00000015447 ZC2HC1C (ENSNVIG00000015432) #28 NEK9 (ENSNVIG00000015397) #29 TMED10 (ENSNVIG00000015385) #30 FOS (ENSNVIG00000015338) #31 JDP2 (ENSNVIG00000015295) #32 BATF (ENSNVIG00000015275) #33 ENSNVIG00000015265 #34 ERG28 (ENSNVIG00000015241) #36 ENSNVIG00000015195 #34 TTLL5 (ENSNVIG00000014956) #35 Ferret MODERN SPECIES 164 ENTPD5 (ENSMPUG00000009544) #7 BBOF1 (ENSMPUG00000009527) #8 ALDH6A1 (ENSMPUG00000009514) #9 LIN52 (ENSMPUG00000009501) #10 VSX2 (ENSMPUG00000009490) #11 ABCD4 (ENSMPUG00000009467) #12 VRTN (ENSMPUG00000019665) #13 SYNDIG1L (ENSMPUG00000009458) #14 NPC2 (ENSMPUG00000009402) #15 ISCA2 (ENSMPUG00000009385) #16 LTBP2 (ENSMPUG00000009367) #17 AREL1 (ENSMPUG00000009357) #18 FCF1 (ENSMPUG00000009321) ##19 YLPM1 (ENSMPUG00000009308) #20 PROX2 (ENSMPUG00000009289) #21 DLST (ENSMPUG00000009271) #22 RPS6KL1 (ENSMPUG00000009264) #23 PGF (ENSMPUG00000009258) #24 MLH3 (ENSMPUG00000009249) #26 EIF2B2 (ENSMPUG00000009241) #25 ENSMPUG00000009236 ZC2HC1C (ENSMPUG00000009227) #28 NEK9 (ENSMPUG00000009195) #29 TMED10 (ENSMPUG00000009159) #30 FOS (ENSMPUG00000009153) #31 JDP2 (ENSMPUG00000009147) #32 BATF (ENSMPUG00000009143) #33 FLVCR2 (ENSMPUG00000009132) #34 ERG28 (ENSMPUG00000009099) #36 TTLL5 (ENSMPUG00000009065) #35 TGFB3 (ENSMPUG00000009060) Ursidae ANCESTRAL SPECIES 10 ENSGT01100000263540.A.b #7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223.t #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.y #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Giant Panda MODERN SPECIES 5 ENTPD5 (ENSAMEG00000018251) #7 BBOF1 (ENSAMEG00000018255) #8 ALDH6A1 (ENSAMEG00000018257) #9 LIN52 (ENSAMEG00000026519) #10 VSX2 (ENSAMEG00000018271) #11 ABCD4 (ENSAMEG00000018272) #12 VRTN (ENSAMEG00000027533) #13 SYNDIG1L (ENSAMEG00000024409) #14 NPC2 (ENSAMEG00000024412) #15 ISCA2 (ENSAMEG00000018270) #16 LTBP2 (ENSAMEG00000018286) #17 AREL1 (ENSAMEG00000018293) #18 FCF1 (ENSAMEG00000018296) #19 YLPM1 (ENSAMEG00000018299) #20 ENSAMEG00000029719 #21 DLST (ENSAMEG00000018307) #22 RPS6KL1 (ENSAMEG00000018311) #23 ENSAMEG00000026677 #24 EIF2B2 (ENSAMEG00000018315) #25 MLH3 (ENSAMEG00000018320) #26 ENSAMEG00000025824 ZC2HC1C (ENSAMEG00000018327) #28 NEK9 (ENSAMEG00000018328) #29 TMED10 (ENSAMEG00000018333) #30 FOS (ENSAMEG00000027409) #31 JDP2 (ENSAMEG00000018337) #32 BATF (ENSAMEG00000025412) #33 FLVCR2 (ENSAMEG00000018339) #34 ERG28 (ENSAMEG00000018343) #36 TTLL5 (ENSAMEG00000018345) #35 TGFB3 (ENSAMEG00000018349) Ursus ANCESTRAL SPECIES 11 ENSGT00390000015152 ENSGT01100000263540.A.b #7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223.t #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954.y #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Polar bear MODERN SPECIES 100 FAM161B (ENSUMAG00000008908) COQ6 (ENSUMAG00000008906) ENTPD5 (ENSUMAG00000008900) #7 BBOF1 (ENSUMAG00000008882) #8 ALDH6A1 (ENSUMAG00000008875) #9 LIN52 (ENSUMAG00000008858) #10 ABCD4 (ENSUMAG00000008856) #12 SYNDIG1L (ENSUMAG00000008850) #14 NPC2 (ENSUMAG00000008831) #15 ISCA2 (ENSUMAG00000008826) #16 LTBP2 (ENSUMAG00000008811) #17 AREL1 (ENSUMAG00000008802) #18 ENSUMAG00000008797 ##19 YLPM1 (ENSUMAG00000008386) #20 PROX2 (ENSUMAG00000008333) #21 DLST (ENSUMAG00000008287) #22 RPS6KL1 (ENSUMAG00000008272) #23 ENSUMAG00000008264 ENSUMAG00000008261 #24 EIF2B2 (ENSUMAG00000008256) #25 MLH3 (ENSUMAG00000008145) #26 ENSUMAG00000008119 ZC2HC1C (ENSUMAG00000008115) #28 NEK9 (ENSUMAG00000007797) #29 TMED10 (ENSUMAG00000007763) #30 FOS (ENSUMAG00000007758) #31 JDP2 (ENSUMAG00000007737) #32 BATF (ENSUMAG00000007730) #33 FLVCR2 (ENSUMAG00000007713) #34 ERG28 (ENSUMAG00000007701) #36 TTLL5 (ENSUMAG00000007586) #35 American black bear DUPLICATION American black bear MODERN SPECIES 60 ENSUAMG00000013534 #22 RPS6KL1 (ENSUAMG00000013529) #23 PGF (ENSUAMG00000013523) #24 EIF2B2 (ENSUAMG00000013519) #25 MLH3 (ENSUAMG00000013512) #26 ENSUAMG00000013508 ZC2HC1C (ENSUAMG00000013505) #28 NEK9 (ENSUAMG00000013350) #29 ENSUAMG00000013345 #30 ENSUAMG00000013342 #31 American black bear MODERN SPECIES 7219 ENSUAMG00000010152 ENSUAMG00000010150 #22 Felidae ANCESTRAL SPECIES 1 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000004322.a.b.j.f.b ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00670000098076.y ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Cat MODERN SPECIES 237 ALDH6A1 (ENSFCAG00000006202) #9 LIN52 (ENSFCAG00000042593) #10 VSX2 (ENSFCAG00000041695) #11 ABCD4 (ENSFCAG00000006206) #12 ENSFCAG00000041962 VRTN (ENSFCAG00000006363) #13 SYNDIG1L (ENSFCAG00000006364) #14 NPC2 (ENSFCAG00000029894) #15 ISCA2 (ENSFCAG00000040858) #16 LTBP2 (ENSFCAG00000006366) #17 ENSFCAG00000053735 AREL1 (ENSFCAG00000006368) #18 FCF1 (ENSFCAG00000022753) ##19 YLPM1 (ENSFCAG00000033466) #20 PROX2 (ENSFCAG00000028658) #21 DLST (ENSFCAG00000006372) #22 RPS6KL1 (ENSFCAG00000000756) #23 PGF (ENSFCAG00000036808) #24 EIF2B2 (ENSFCAG00000028235) #25 MLH3 (ENSFCAG00000025866) #26 ACYP1 (ENSFCAG00000022756) ZC2HC1C (ENSFCAG00000006375) #28 NEK9 (ENSFCAG00000025501) #29 TMED10 (ENSFCAG00000001472) #30 FOS (ENSFCAG00000025370) #31 JDP2 (ENSFCAG00000029464) #32 BATF (ENSFCAG00000036906) #33 FLVCR2 (ENSFCAG00000014196) #34 ERG28 (ENSFCAG00000014198) #36 TTLL5 (ENSFCAG00000014200) #35 TGFB3 (ENSFCAG00000014204) Panthera ANCESTRAL SPECIES 3 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000004322.a.b.j.f.b ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00670000098076.y ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Panthera_a ANCESTRAL SPECIES 7 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000004322.a.b.j.f.b ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00670000098076.y ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 leopard MODERN SPECIES 109 BBOF1 (ENSPPRG00000018080) #8 ALDH6A1 (ENSPPRG00000016252) #9 LIN52 (ENSPPRG00000014701) #10 VSX2 (ENSPPRG00000014452) #11 ABCD4 (ENSPPRG00000014193) #12 ENSPPRG00000020217 SYNDIG1L (ENSPPRG00000012500) #14 NPC2 (ENSPPRG00000012026) #15 ISCA2 (ENSPPRG00000011662) #16 LTBP2 (ENSPPRG00000010146) #17 AREL1 (ENSPPRG00000006846) #18 ENSPPRG00000006398 #19 YLPM1 (ENSPPRG00000005704) #20 ENSPPRG00000004808 ENSPPRG00000004385 #21 DLST (ENSPPRG00000004226) #22 RPS6KL1 (ENSPPRG00000003181) #23 PGF (ENSPPRG00000001100) #24 EIF2B2 (ENSPPRG00000000321) #25 MLH3 (ENSPPRG00000022709) #26 ENSPPRG00000023976 ZC2HC1C (ENSPPRG00000024260) #28 NEK9 (ENSPPRG00000022516) #29 TMED10 (ENSPPRG00000019952) #30 FOS (ENSPPRG00000019513) #31 JDP2 (ENSPPRG00000018181) #32 BATF (ENSPPRG00000016427) #33 FLVCR2 (ENSPPRG00000015729) #34 ERG28 (ENSPPRG00000012901) #36 TTLL5 (ENSPPRG00000012572) #35 TGFB3 (ENSPPRG00000008430) lion MODERN SPECIES 6 ALDH6A1 (ENSPLOG00000001208) #9 LIN52 (ENSPLOG00000001251) #10 VSX2 (ENSPLOG00000001284) #11 ABCD4 (ENSPLOG00000001310) #12 ENSPLOG00000001333 VRTN (ENSPLOG00000001350) #13 SYNDIG1L (ENSPLOG00000001355) #14 NPC2 (ENSPLOG00000001365) #15 ISCA2 (ENSPLOG00000001378) #16 LTBP2 (ENSPLOG00000001497) #17 ENSPLOG00000001618 AREL1 (ENSPLOG00000001636) #18 ENSPLOG00000001674 ##19 YLPM1 (ENSPLOG00000001726) #20 ENSPLOG00000001770 #21 DLST (ENSPLOG00000001785) #22 RPS6KL1 (ENSPLOG00000001818) #23 PGF (ENSPLOG00000001839) #24 EIF2B2 (ENSPLOG00000001880) #25 MLH3 (ENSPLOG00000001931) #26 ENSPLOG00000001988 ZC2HC1C (ENSPLOG00000002009) #28 NEK9 (ENSPLOG00000002048) #29 TMED10 (ENSPLOG00000002116) #30 FOS (ENSPLOG00000002140) #31 JDP2 (ENSPLOG00000002179) #32 BATF (ENSPLOG00000002194) #33 FLVCR2 (ENSPLOG00000002234) #34 ERG28 (ENSPLOG00000002289) #36 TTLL5 (ENSPLOG00000002332) #35 TGFB3 (ENSPLOG00000002406) Tiger MODERN SPECIES 490 BBOF1 (ENSPTIG00000016264) #8 ALDH6A1 (ENSPTIG00000016228) #9 LIN52 (ENSPTIG00000016204) #10 VSX2 (ENSPTIG00000016197) #11 ABCD4 (ENSPTIG00000016181) #12 ENSPTIG00000006594 VRTN (ENSPTIG00000016173) #13 SYNDIG1L (ENSPTIG00000016165) #14 NPC2 (ENSPTIG00000016030) #15 ISCA2 (ENSPTIG00000016002) #16 ENSPTIG00000015991 #17 AREL1 (ENSPTIG00000015968) #18 ENSPTIG00000015948 ##19 YLPM1 (ENSPTIG00000015893) #20 PROX2 (ENSPTIG00000015867) #21 DLST (ENSPTIG00000015793) #22 RPS6KL1 (ENSPTIG00000015758) #23 PGF (ENSPTIG00000015737) #24 EIF2B2 (ENSPTIG00000015724) #25 MLH3 (ENSPTIG00000015702) #26 ENSPTIG00000015684 ZC2HC1C (ENSPTIG00000015672) #28 NEK9 (ENSPTIG00000015640) #29 TMED10 (ENSPTIG00000015563) #30 FOS (ENSPTIG00000015550) #31 JDP2 (ENSPTIG00000015529) #32 BATF (ENSPTIG00000015520) #33 ERG28 (ENSPTIG00000015488) #36 FLVCR2 (ENSPTIG00000015461) #34 TTLL5 (ENSPTIG00000015299) #35 TGFB3 (ENSPTIG00000015253) Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00530000064848 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Equus ANCESTRAL SPECIES 17 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f.b.b #34 ENSGT01030000234625.B.d.e.b #34 ENSGT01030000234625.B.d.f.a #34 ENSGT00390000010925 #36 Donkey MODERN SPECIES 27 BBOF1 (ENSEASG00005011653) #8 ALDH6A1 (ENSEASG00005011664) #9 LIN52 (ENSEASG00005031315) #10 VSX2 (ENSEASG00005011673) #11 ABCD4 (ENSEASG00005011677) #12 VRTN (ENSEASG00005011680) #13 SYNDIG1L (ENSEASG00005011683) #14 NPC2 (ENSEASG00005023991) #15 ISCA2 (ENSEASG00005032166) #16 LTBP2 (ENSEASG00005011719) #17 ENSEASG00005012000 AREL1 (ENSEASG00005012006) #18 FCF1 (ENSEASG00005012011) ##19 YLPM1 (ENSEASG00005012016) #20 ENSEASG00005032702 #21 DLST (ENSEASG00005012025) #22 RPS6KL1 (ENSEASG00005012030) #23 PGF (ENSEASG00005012033) #24 EIF2B2 (ENSEASG00005012035) #25 MLH3 (ENSEASG00005012041) #26 ENSEASG00005033366 ZC2HC1C (ENSEASG00005012049) #28 NEK9 (ENSEASG00005012069) #29 TMED10 (ENSEASG00005012384) #30 FOS (ENSEASG00005012390) #31 ENSEASG00005025547 #32 BATF (ENSEASG00005037745) #33 ENSEASG00005019748 #34 ENSEASG00005037343 #34 ENSEASG00005026680 #34 ENSEASG00005028828 #34 Horse MODERN SPECIES 16 ENSECAG00000057994 ALDH6A1 (ENSECAG00000009453) #9 LIN52 (ENSECAG00000022953) #10 ENSECAG00000048527 VSX2 (ENSECAG00000023780) #11 ABCD4 (ENSECAG00000000282) #12 VRTN (ENSECAG00000038256) #13 SYNDIG1L (ENSECAG00000018296) #14 NPC2 (ENSECAG00000018345) #15 ISCA2 (ENSECAG00000018007) LTBP2 (ENSECAG00000018631) #17 AREL1 (ENSECAG00000059545) #18 FCF1 (ENSECAG00000008261) #19 YLPM1 (ENSECAG00000016305) #20 ENSECAG00000023529 #21 DLST (ENSECAG00000000273) #22 RPS6KL1 (ENSECAG00000014056) #23 PGF (ENSECAG00000031273) #24 EIF2B2 (ENSECAG00000000332) #25 MLH3 (ENSECAG00000008011) #26 ZC2HC1C (ENSECAG00000017661) #28 NEK9 (ENSECAG00000018489) #29 TMED10 (ENSECAG00000008831) #30 FOS (ENSECAG00000014260) #31 JDP2 (ENSECAG00000034290) #32 ENSECAG00000017937 #34 BATF (ENSECAG00000016422) #33 ENSECAG00000055708 ENSECAG00000056517 #34 ENSECAG00000055095 #34 ENSECAG00000051647 #34 Chiroptera ANCESTRAL SPECIES 15 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00530000064848 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Megabat MODERN SPECIES 922 BBOF1 (ENSPVAG00000000644) #8 ALDH6A1 (ENSPVAG00000000645) #9 LIN52 (ENSPVAG00000000646) #10 VSX2 (ENSPVAG00000000647) #11 ABCD4 (ENSPVAG00000000648) #12 VRTN (ENSPVAG00000000649) #13 SYNDIG1L (ENSPVAG00000000650) #14 NPC2 (ENSPVAG00000000651) #15 ISCA2 (ENSPVAG00000000652) #16 LTBP2 (ENSPVAG00000000653) #17 AREL1 (ENSPVAG00000000655) #18 ENSPVAG00000000656 FCF1 (ENSPVAG00000000657) ##19 YLPM1 (ENSPVAG00000000658) #20 PROX2 (ENSPVAG00000000659) #21 DLST (ENSPVAG00000000660) #22 RPS6KL1 (ENSPVAG00000000661) #23 PGF (ENSPVAG00000000662) #24 EIF2B2 (ENSPVAG00000000663) #25 MLH3 (ENSPVAG00000000664) #26 ENSPVAG00000000666 NEK9 (ENSPVAG00000000667) #29 TMED10 (ENSPVAG00000000670) #30 FOS (ENSPVAG00000000671) #31 JDP2 (ENSPVAG00000000672) #32 BATF (ENSPVAG00000000674) #33 FLVCR2 (ENSPVAG00000000675) #34 ERG28 (ENSPVAG00000000677) #36 TTLL5 (ENSPVAG00000000679) #35 TGFB3 (ENSPVAG00000000681) IFT43 (ENSPVAG00000000683) #37 Microchiroptera ANCESTRAL SPECIES 19 ENSGT01100000263540.A.b #7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Microbat MODERN SPECIES 1172 VSX2 (ENSMLUG00000010090) #11 ABCD4 (ENSMLUG00000004541) #12 SYNDIG1L (ENSMLUG00000004551) #14 NPC2 (ENSMLUG00000004558) #15 ENSMLUG00000029419 #16 ENSMLUG00000012381 #18 ENSMLUG00000022193 YLPM1 (ENSMLUG00000004983) #20 PROX2 (ENSMLUG00000005898) #21 DLST (ENSMLUG00000005909) #22 RPS6KL1 (ENSMLUG00000005917) #23 ENSMLUG00000005931 #24 ENSMLUG00000005942 #25 MLH3 (ENSMLUG00000005949) #26 ENSMLUG00000007742 ZC2HC1C (ENSMLUG00000010524) #28 NEK9 (ENSMLUG00000010541) #29 ENSMLUG00000017125 #30 FOS (ENSMLUG00000003729) #31 ENSMLUG00000002256 #32 BATF (ENSMLUG00000013360) #33 FLVCR2 (ENSMLUG00000013362) #34 ERG28 (ENSMLUG00000013376) #36 TTLL5 (ENSMLUG00000013381) #35 TGFB3 (ENSMLUG00000013406) Greater horseshoe bat MODERN SPECIES 24 ENTPD5 (ENSRFEG00010002649) #7 BBOF1 (ENSRFEG00010002580) #8 ALDH6A1 (ENSRFEG00010002445) #9 LIN52 (ENSRFEG00010002408) #10 VSX2 (ENSRFEG00010002363) #11 ABCD4 (ENSRFEG00010002301) #12 VRTN (ENSRFEG00010002267) #13 SYNDIG1L (ENSRFEG00010002259) #14 NPC2 (ENSRFEG00010002250) #15 ISCA2 (ENSRFEG00010002215) #16 LTBP2 (ENSRFEG00010002042) #17 AREL1 (ENSRFEG00010001938) #18 ENSRFEG00010001893 #19 YLPM1 (ENSRFEG00010001752) #20 ENSRFEG00010001697 #21 DLST (ENSRFEG00010001634) #22 RPS6KL1 (ENSRFEG00010001576) #23 PGF (ENSRFEG00010001542) #24 EIF2B2 (ENSRFEG00010001498) #25 MLH3 (ENSRFEG00010001317) #26 ZC2HC1C (ENSRFEG00010001234) #28 NEK9 (ENSRFEG00010001168) #29 TMED10 (ENSRFEG00010001139) #30 FOS (ENSRFEG00010001112) #31 JDP2 (ENSRFEG00010001081) #32 BATF (ENSRFEG00010001057) #33 ERG28 (ENSRFEG00010001031) #36 FLVCR2 (ENSRFEG00010000978) #34 TTLL5 (ENSRFEG00010000797) #35 TGFB3 (ENSRFEG00010000739) IFT43 (ENSRFEG00010000684) #37 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00530000064848 ENSGT00940000153117.B.c.b ##19 ENSGT00940000153117.B.c.a ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00990000207089 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00530000064848 ENSGT00940000153117.B.c.b ##19 ENSGT00940000153117.B.c.a ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00990000207089 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 Camelidae ANCESTRAL SPECIES 8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.a ##19 ENSGT00530000064848 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Arabian camel MODERN SPECIES 32 ENTPD5 (ENSCDRG00005008760) #7 BBOF1 (ENSCDRG00005008989) #8 ALDH6A1 (ENSCDRG00005000113) #9 LIN52 (ENSCDRG00005000203) #10 VSX2 (ENSCDRG00005000228) #11 ABCD4 (ENSCDRG00005000282) #12 VRTN (ENSCDRG00005000338) #13 SYNDIG1L (ENSCDRG00005000359) #14 NPC2 (ENSCDRG00005000375) #15 ISCA2 (ENSCDRG00005000399) #16 LTBP2 (ENSCDRG00005000468) #17 AREL1 (ENSCDRG00005000590) #18 FCF1 (ENSCDRG00005000630) ##19 YLPM1 (ENSCDRG00005000671) #20 ENSCDRG00005000746 #21 DLST (ENSCDRG00005000759) #22 RPS6KL1 (ENSCDRG00005000787) #23 PGF (ENSCDRG00005000818) #24 EIF2B2 (ENSCDRG00005000865) #25 MLH3 (ENSCDRG00005000924) #26 ENSCDRG00005001055 ZC2HC1C (ENSCDRG00005001075) #28 NEK9 (ENSCDRG00005001099) #29 ENSCDRG00005001147 #30 FOS (ENSCDRG00005001172) #31 JDP2 (ENSCDRG00005001197) #32 BATF (ENSCDRG00005001210) #33 FLVCR2 (ENSCDRG00005001225) #34 ERG28 (ENSCDRG00005001259) #36 TTLL5 (ENSCDRG00005001293) #35 TGFB3 (ENSCDRG00005001558) Alpaca MODERN SPECIES 72 AREL1 (ENSVPAG00000003059) #18 ENSVPAG00000003063 FCF1 (ENSVPAG00000003066) ##19 YLPM1 (ENSVPAG00000003067) #20 PROX2 (ENSVPAG00000003072) #21 DLST (ENSVPAG00000003074) #22 RPS6KL1 (ENSVPAG00000003077) #23 ENSVPAG00000003079 #24 EIF2B2 (ENSVPAG00000003082) #25 MLH3 (ENSVPAG00000003084) #26 ENSVPAG00000003085 ZC2HC1C (ENSVPAG00000003086) #28 NEK9 (ENSVPAG00000003088) #29 TMED10 (ENSVPAG00000003089) #30 JDP2 (ENSVPAG00000003090) #32 BATF (ENSVPAG00000003093) #33 FLVCR2 (ENSVPAG00000003094) #34 ENSVPAG00000003095 TTLL5 (ENSVPAG00000003096) #35 ENSVPAG00000003099 GPATCH2L (ENSVPAG00000003100) Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00990000207089 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 Pecora ANCESTRAL SPECIES 6 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.a ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925.c.a #36 ENSGT00940000162939 #35 ENSGT00940000155747 Percora_a ANCESTRAL SPECIES 8 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.a ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925.c.a #36 ENSGT00940000162939 #35 ENSGT00940000155747 Bovidae ANCESTRAL SPECIES 7 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00990000210987 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.a ##19 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f.e.a #34 ENSGT00390000010925.d #36 ENSGT00940000162939 #35 ENSGT00940000155747 Caprinae ANCESTRAL SPECIES 11 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00990000210987 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00390000010172.y ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f.e.a #34 ENSGT01030000234625.B.d.f.e.b #34 ENSGT00390000010925.c.a #36 Rambouillet Sheep MODERN SPECIES 23 ALDH6A1 (ENSOARG00020014015) #9 LIN52 (ENSOARG00020014138) #10 VSX2 (ENSOARG00020014208) #11 ABCD4 (ENSOARG00020014282) #12 VRTN (ENSOARG00020014385) #13 SYNDIG1L (ENSOARG00020014401) #14 NPC2 (ENSOARG00020014455) #15 ISCA2 (ENSOARG00020014514) #16 LTBP2 (ENSOARG00020014686) #17 ENSOARG00020015656 ENSOARG00020015685 AREL1 (ENSOARG00020015742) #18 FCF1 (ENSOARG00020015954) ##19 YLPM1 (ENSOARG00020016026) #20 ENSOARG00020016649 #21 DLST (ENSOARG00020016709) #22 RPS6KL1 (ENSOARG00020016765) #23 PGF (ENSOARG00020016856) #24 ENSOARG00020017002 EIF2B2 (ENSOARG00020017031) #25 ENSOARG00020017721 ZC2HC1C (ENSOARG00020017806) #28 NEK9 (ENSOARG00020017867) #29 NEK9 (ENSOARG00020018089) #30 ENSOARG00020018134 FOS (ENSOARG00020018165) #31 JDP2 (ENSOARG00020018321) #32 BATF (ENSOARG00020018372) #33 ENSOARG00020018404 #36 ENSOARG00020018452 #36 ENSOARG00020018534 #36 Goat MODERN SPECIES 1 BBOF1 (ENSCHIG00000009138) #8 ALDH6A1 (ENSCHIG00000011927) #9 LIN52 (ENSCHIG00000024176) #10 VSX2 (ENSCHIG00000015233) #11 ABCD4 (ENSCHIG00000017269) #12 VRTN (ENSCHIG00000022707) #13 SYNDIG1L (ENSCHIG00000019047) #14 NPC2 (ENSCHIG00000019346) #15 ISCA2 (ENSCHIG00000006650) #16 LTBP2 (ENSCHIG00000008338) #17 ENSCHIG00000021080 AREL1 (ENSCHIG00000023661) #18 FCF1 (ENSCHIG00000012196) #19 YLPM1 (ENSCHIG00000016765) #20 PROX2 (ENSCHIG00000010770) #21 DLST (ENSCHIG00000015687) #22 RPS6KL1 (ENSCHIG00000016739) #23 PGF (ENSCHIG00000021989) #24 ENSCHIG00000007844 EIF2B2 (ENSCHIG00000020696) #25 MLH3 (ENSCHIG00000009803) #26 ENSCHIG00000021853 ZC2HC1C (ENSCHIG00000025982) #28 NEK9 (ENSCHIG00000022547) #29 TMED10 (ENSCHIG00000022468) #30 FOS (ENSCHIG00000025384) #31 JDP2 (ENSCHIG00000017157) #32 BATF (ENSCHIG00000009266) #33 ENSCHIG00000019256 #34 ENSCHIG00000013593 #36 ENSCHIG00000025043 #36 Bovinae ANCESTRAL SPECIES 11 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00990000210987 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.a ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f.e.a #34 ENSGT00390000010925.d #36 ENSGT01030000234625.B.d.e.a #34 ENSGT00390000010925.c.b.a.a #36 Bos ANCESTRAL SPECIES 13 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00990000210987 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.a ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f.e.a #34 ENSGT01030000234625.B.d.e.a #34 ENSGT00390000010925.c.b.a.a #36 ENSGT00940000162939 #35 Bos_b ANCESTRAL SPECIES 11 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.a ##19 ENSGT00940000153117.B.c.b ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f.e.a #34 ENSGT01030000234625.B.d.f.e.b #34 ENSGT00940000162939 #35 ENSGT00390000010925.c.a #36 Hybrid Bos Indicus MODERN SPECIES 1 ALDH6A1 (ENSBIXG00005026295) #9 LIN52 (ENSBIXG00005026222) #10 VSX2 (ENSBIXG00005026200) #11 ABCD4 (ENSBIXG00005026163) #12 VRTN (ENSBIXG00005026108) #13 SYNDIG1L (ENSBIXG00005026092) #14 NPC2 (ENSBIXG00005026057) #15 ENSBIXG00005026039 #16 LTBP2 (ENSBIXG00005025977) #17 ENSBIXG00005025782 AREL1 (ENSBIXG00005006183) #18 ENSBIXG00005025743 ENSBIXG00005004386 ##19 YLPM1 (ENSBIXG00005025680) #20 ENSBIXG00005025629 #21 DLST (ENSBIXG00005007402) #22 RPS6KL1 (ENSBIXG00005025559) #23 PGF (ENSBIXG00005025480) #24 EIF2B2 (ENSBIXG00005025394) #25 MLH3 (ENSBIXG00005025342) #26 ENSBIXG00005025275 ZC2HC1C (ENSBIXG00005025227) #28 NEK9 (ENSBIXG00005025200) #29 TMED10 (ENSBIXG00005025171) #30 FOS (ENSBIXG00005025139) #31 JDP2 (ENSBIXG00005025082) #32 ENSBIXG00005025026 BATF (ENSBIXG00005025002) #33 ENSBIXG00005024965 #34 ENSBIXG00005024804 #34 ENSBIXG00005024769 Cow MODERN SPECIES 1 ENSBTAG00000053938 ALDH6A1 (ENSBTAG00000018469) #9 LIN52 (ENSBTAG00000030557) #10 VSX2 (ENSBTAG00000014632) #11 ABCD4 (ENSBTAG00000014633) #12 VRTN (ENSBTAG00000005774) #13 SYNDIG1L (ENSBTAG00000052950) #14 NPC2 (ENSBTAG00000021955) #15 ISCA2 (ENSBTAG00000021956) #16 LTBP2 (ENSBTAG00000021957) #17 ENSBTAG00000050205 AREL1 (ENSBTAG00000020379) #18 FCF1 (ENSBTAG00000020381) ##19 YLPM1 (ENSBTAG00000008287) #20 PROX2 (ENSBTAG00000015052) #21 DLST (ENSBTAG00000006463) #22 RPS6KL1 (ENSBTAG00000006688) #23 PGF (ENSBTAG00000013688) #24 EIF2B2 (ENSBTAG00000008664) #25 MLH3 (ENSBTAG00000019279) #26 ACYP1 (ENSBTAG00000013992) ZC2HC1C (ENSBTAG00000013983) #28 NEK9 (ENSBTAG00000016612) #29 TMED10 (ENSBTAG00000005694) #30 FOS (ENSBTAG00000004322) #31 JDP2 (ENSBTAG00000009451) #32 BATF (ENSBTAG00000025405) #33 FLVCR2 (ENSBTAG00000040078) #34 ENSBTAG00000011985 #34 ERG28 (ENSBTAG00000011987) #36 TTLL5 (ENSBTAG00000025403) Bos_a ANCESTRAL SPECIES 1 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00990000210987 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.e.a #34 ENSGT00390000010925.c.b.a.a #36 ENSGT00390000010925.c.a #36 ENSGT00940000162939 #35 Domestic yak MODERN SPECIES 2 LIN52 (ENSBGRG00000006226) #10 VSX2 (ENSBGRG00000006307) #11 ABCD4 (ENSBGRG00000006381) #12 VRTN (ENSBGRG00000006578) #13 SYNDIG1L (ENSBGRG00000006594) #14 NPC2 (ENSBGRG00000006618) #15 ISCA2 (ENSBGRG00000006642) #16 LTBP2 (ENSBGRG00000006692) #17 ENSBGRG00000006766 ENSBGRG00000006783 AREL1 (ENSBGRG00000006814) #18 ENSBGRG00000006917 #19 YLPM1 (ENSBGRG00000007101) #20 ENSBGRG00000007592 #21 ENSBGRG00000007645 DLST (ENSBGRG00000007671) #22 RPS6KL1 (ENSBGRG00000007964) #23 PGF (ENSBGRG00000008113) #24 EIF2B2 (ENSBGRG00000008344) #25 MLH3 (ENSBGRG00000008456) #26 ENSBGRG00000008858 ZC2HC1C (ENSBGRG00000008922) #28 NEK9 (ENSBGRG00000008973) #29 TMED10 (ENSBGRG00000009052) #30 FOS (ENSBGRG00000009096) #31 JDP2 (ENSBGRG00000009251) #32 ENSBGRG00000009350 #33 ENSBGRG00000009398 ENSBGRG00000009425 #34 ERG28 (ENSBGRG00000009468) #36 TTLL5 (ENSBGRG00000009576) #35 Wild yak MODERN SPECIES 1230 VSX2 (ENSBMUG00000007282) #11 ABCD4 (ENSBMUG00000007298) #12 SYNDIG1L (ENSBMUG00000007323) #14 NPC2 (ENSBMUG00000007338) #15 ISCA2 (ENSBMUG00000007353) #16 LTBP2 (ENSBMUG00000007454) #17 ENSBMUG00000007472 AREL1 (ENSBMUG00000007478) #18 ENSBMUG00000007493 ##19 YLPM1 (ENSBMUG00000007507) #20 ENSBMUG00000007517 #21 DLST (ENSBMUG00000007522) #22 RPS6KL1 (ENSBMUG00000007535) #23 PGF (ENSBMUG00000007539) #24 EIF2B2 (ENSBMUG00000007544) #25 MLH3 (ENSBMUG00000007555) #26 ENSBMUG00000007560 ZC2HC1C (ENSBMUG00000007566) #28 NEK9 (ENSBMUG00000007574) #29 TMED10 (ENSBMUG00000007579) #30 FOS (ENSBMUG00000007590) #31 JDP2 (ENSBMUG00000007601) #32 BATF (ENSBMUG00000007615) #33 American bison MODERN SPECIES 3282 BBOF1 (ENSBBBG00000003080) #8 ALDH6A1 (ENSBBBG00000003099) #9 LIN52 (ENSBBBG00000003104) #10 VSX2 (ENSBBBG00000014020) #11 ABCD4 (ENSBBBG00000003123) #12 VRTN (ENSBBBG00000003129) #13 SYNDIG1L (ENSBBBG00000014055) #14 NPC2 (ENSBBBG00000014061) #15 ISCA2 (ENSBBBG00000014070) #16 LTBP2 (ENSBBBG00000003189) #17 AREL1 (ENSBBBG00000003202) #18 ENSBBBG00000014171 ##19 YLPM1 (ENSBBBG00000014199) #20 PROX2 (ENSBBBG00000002886) #21 ENSBBBG00000014217 DLST (ENSBBBG00000003225) #22 PGF (ENSBBBG00000014283) #24 EIF2B2 (ENSBBBG00000003247) #25 MLH3 (ENSBBBG00000014333) #26 ENSBBBG00000014347 ZC2HC1C (ENSBBBG00000014352) #28 NEK9 (ENSBBBG00000014365) #29 TMED10 (ENSBBBG00000014371) #30 FOS (ENSBBBG00000014386) #31 JDP2 (ENSBBBG00000001407) #32 BATF (ENSBBBG00000014403) #33 ENSBBBG00000014424 #34 ENSBBBG00000014438 #36 Siberian musk deer MODERN SPECIES 260 BBOF1 (ENSMMSG00000021217) #8 ALDH6A1 (ENSMMSG00000021323) #9 LIN52 (ENSMMSG00000021369) #10 VSX2 (ENSMMSG00000021411) #11 ABCD4 (ENSMMSG00000021448) #12 VRTN (ENSMMSG00000021493) #13 SYNDIG1L (ENSMMSG00000021508) #14 NPC2 (ENSMMSG00000021533) #15 ISCA2 (ENSMMSG00000021564) #16 LTBP2 (ENSMMSG00000021618) #17 ENSMMSG00000021702 AREL1 (ENSMMSG00000021715) #18 FCF1 (ENSMMSG00000021755) ##19 YLPM1 (ENSMMSG00000021806) #20 ENSMMSG00000021897 #21 DLST (ENSMMSG00000021926) #22 RPS6KL1 (ENSMMSG00000021985) #23 PGF (ENSMMSG00000022015) #24 EIF2B2 (ENSMMSG00000022041) #25 MLH3 (ENSMMSG00000022075) #26 ZC2HC1C (ENSMMSG00000022215) #28 NEK9 (ENSMMSG00000022235) #29 ENSMMSG00000022285 TMED10 (ENSMMSG00000022295) #30 FOS (ENSMMSG00000022311) #31 JDP2 (ENSMMSG00000022346) #32 BATF (ENSMMSG00000022368) #33 FLVCR2 (ENSMMSG00000022392) #34 ENSMMSG00000022462 #36 ENSMMSG00000022474 ENSMMSG00000004476 #36 Yarkand deer MODERN SPECIES 3 ALDH6A1 (ENSCHYG00000023203) #9 LIN52 (ENSCHYG00000023413) #10 ENSCHYG00000023471 VSX2 (ENSCHYG00000023493) #11 ABCD4 (ENSCHYG00000023537) #12 VRTN (ENSCHYG00000023697) #13 SYNDIG1L (ENSCHYG00000023714) #14 ENSCHYG00000004570 #15 ISCA2 (ENSCHYG00000004587) #16 LTBP2 (ENSCHYG00000005208) #17 ENSCHYG00000005614 AREL1 (ENSCHYG00000005628) #18 FCF1 (ENSCHYG00000005712) ##19 YLPM1 (ENSCHYG00000005805) #20 PROX2 (ENSCHYG00000006125) #21 DLST (ENSCHYG00000006173) #22 RPS6KL1 (ENSCHYG00000006336) #23 ENSCHYG00000006497 #24 EIF2B2 (ENSCHYG00000006598) #25 MLH3 (ENSCHYG00000006695) #26 ZC2HC1C (ENSCHYG00000006886) #28 NEK9 (ENSCHYG00000006917) #29 TMED10 (ENSCHYG00000007018) #30 FOS (ENSCHYG00000007069) #31 ENSCHYG00000007218 JDP2 (ENSCHYG00000007237) #32 BATF (ENSCHYG00000007278) #33 ENSCHYG00000007326 #34 ENSCHYG00000007628 #34 ENSCHYG00000007651 #36 TTLL5 (ENSCHYG00000007731) #35 Cetacea ANCESTRAL SPECIES 2 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223.p #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00910000147973 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000158980.b ENSGT00940000159276 #31 ENSGT00990000207089 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 Blue whale MODERN SPECIES 11 ENTPD5 (ENSBMSG00010006501) #7 BBOF1 (ENSBMSG00010006525) #8 ENSBMSG00010006546 LIN52 (ENSBMSG00010006623) #10 VSX2 (ENSBMSG00010006660) #11 ABCD4 (ENSBMSG00010006684) #12 SYNDIG1L (ENSBMSG00010006725) #14 ENSBMSG00010006750 #15 ISCA2 (ENSBMSG00010006777) #16 LTBP2 (ENSBMSG00010006856) #17 AREL1 (ENSBMSG00010006958) #18 ENSBMSG00010006980 #19 ENSBMSG00010006988 YLPM1 (ENSBMSG00010007012) #20 ENSBMSG00010007040 #21 DLST (ENSBMSG00010007068) #22 RPS6KL1 (ENSBMSG00010007119) #23 PGF (ENSBMSG00010007155) #24 EIF2B2 (ENSBMSG00010007177) #25 MLH3 (ENSBMSG00010007225) #26 ENSBMSG00010007280 ZC2HC1C (ENSBMSG00010007296) #28 NEK9 (ENSBMSG00010007311) #29 TMED10 (ENSBMSG00010007334) #30 ENSBMSG00010007349 FOS (ENSBMSG00010007361) #31 JDP2 (ENSBMSG00010007385) #32 FLVCR2 (ENSBMSG00010007550) #34 ENSBMSG00010007570 ERG28 (ENSBMSG00010007579) #36 TTLL5 (ENSBMSG00010007632) #35 Odontoceti ANCESTRAL SPECIES 2 ENSGT00390000008092.a.k.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223.p #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00910000147973 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000158980.b ENSGT00940000159276 #31 ENSGT00990000207089 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 Sperm whale MODERN SPECIES 2 ENSPCTG00005022468 ALDH6A1 (ENSPCTG00005022500) #9 LIN52 (ENSPCTG00005022555) #10 VSX2 (ENSPCTG00005022587) #11 ABCD4 (ENSPCTG00005022592) #12 VRTN (ENSPCTG00005022596) #13 SYNDIG1L (ENSPCTG00005022606) #14 NPC2 (ENSPCTG00005022616) #15 ISCA2 (ENSPCTG00005022629) #16 LTBP2 (ENSPCTG00005022652) #17 ENSPCTG00005022671 AREL1 (ENSPCTG00005022673) #18 FCF1 (ENSPCTG00005022674) ##19 YLPM1 (ENSPCTG00005022679) #20 ENSPCTG00005022683 #21 DLST (ENSPCTG00005022685) #22 ENSPCTG00005022692 #23 PGF (ENSPCTG00005022697) #24 EIF2B2 (ENSPCTG00005022702) #25 ACYP1 (ENSPCTG00005022706) #26 ZC2HC1C (ENSPCTG00005022709) #28 TMED10 (ENSPCTG00005022711) #29 ENSPCTG00005022712 #32 BATF (ENSPCTG00005022713) #33 FLVCR2 (ENSPCTG00005022714) #34 ERG28 (ENSPCTG00005022716) #36 TTLL5 (ENSPCTG00005022718) #35 ENSPCTG00005022725 GPATCH2L (ENSPCTG00005022727) IFT43 (ENSPCTG00005022728) #37 ENSPCTG00005022729 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00390000008092.a.k.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223.p #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00910000147973 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000158980.b ENSGT00940000159276 #31 ENSGT00990000207089 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 Dolphin MODERN SPECIES 25 YLPM1 (ENSTTRG00000001907) #20 PROX2 (ENSTTRG00000001912) #21 DLST (ENSTTRG00000001915) #22 RPS6KL1 (ENSTTRG00000001917) #23 PGF (ENSTTRG00000001918) #24 EIF2B2 (ENSTTRG00000001921) #25 MLH3 (ENSTTRG00000001923) #26 ACYP1 (ENSTTRG00000001925) ZC2HC1C (ENSTTRG00000001926) #28 NEK9 (ENSTTRG00000001928) #29 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00390000008092.a.k.b ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223.p #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00910000147973 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000158980.b ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00940000157848.e.b ENSGT00390000010925 #36 Vaquita MODERN SPECIES 11 ENSPSNG00000017159 ALDH6A1 (ENSPSNG00000017217) #9 LIN52 (ENSPSNG00000017321) #10 VSX2 (ENSPSNG00000017375) #11 ABCD4 (ENSPSNG00000017443) #12 VRTN (ENSPSNG00000017561) #13 SYNDIG1L (ENSPSNG00000017585) #14 ENSPSNG00000017639 #15 ENSPSNG00000017665 LTBP2 (ENSPSNG00000017786) #17 ENSPSNG00000017877 AREL1 (ENSPSNG00000017910) #18 FCF1 (ENSPSNG00000017954) #19 YLPM1 (ENSPSNG00000009718) #20 ENSPSNG00000009885 #21 DLST (ENSPSNG00000009959) #22 RPS6KL1 (ENSPSNG00000010039) #23 PGF (ENSPSNG00000010102) #24 EIF2B2 (ENSPSNG00000010274) #25 MLH3 (ENSPSNG00000010427) #26 ENSPSNG00000010828 ZC2HC1C (ENSPSNG00000010910) #28 NEK9 (ENSPSNG00000010998) #29 TMED10 (ENSPSNG00000011085) #30 ENSPSNG00000011136 FOS (ENSPSNG00000011265) #31 JDP2 (ENSPSNG00000011391) #32 BATF (ENSPSNG00000011426) #33 FLVCR2 (ENSPSNG00000011492) #34 ENSPSNG00000011652 ENSPSNG00000011740 #36 Monodontidae ANCESTRAL SPECIES 5 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223.p #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00390000013771.d ENSGT00910000147973 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000158980.b ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00940000157848.e.b ENSGT00390000010925 #36 Narwhal MODERN SPECIES 308 ALDH6A1 (ENSMMNG00015015950) #9 LIN52 (ENSMMNG00015015990) #10 VSX2 (ENSMMNG00015016032) #11 ABCD4 (ENSMMNG00015016106) #12 VRTN (ENSMMNG00015016199) #13 SYNDIG1L (ENSMMNG00015016210) #14 ENSMMNG00015016236 #15 ISCA2 (ENSMMNG00015016275) #16 LTBP2 (ENSMMNG00015016409) #17 ENSMMNG00015016679 AREL1 (ENSMMNG00015016706) #18 FCF1 (ENSMMNG00015016775) #19 ENSMMNG00015016846 YLPM1 (ENSMMNG00015016889) #20 ENSMMNG00015016949 #21 DLST (ENSMMNG00015016974) #22 RPS6KL1 (ENSMMNG00015017009) #23 PGF (ENSMMNG00015017047) #24 EIF2B2 (ENSMMNG00015017142) #25 MLH3 (ENSMMNG00015017206) #26 ENSMMNG00015017395 ZC2HC1C (ENSMMNG00015017432) #28 NEK9 (ENSMMNG00015017473) #29 TMED10 (ENSMMNG00015017595) #30 ENSMMNG00015017621 FOS (ENSMMNG00015017653) #31 JDP2 (ENSMMNG00015017702) #32 BATF (ENSMMNG00015017732) #33 FLVCR2 (ENSMMNG00015017770) #34 ENSMMNG00015017843 ERG28 (ENSMMNG00015017871) #36 Beluga whale MODERN SPECIES 24 ENSDLEG00000004670 VSX2 (ENSDLEG00000004663) #11 ABCD4 (ENSDLEG00000004639) #12 VRTN (ENSDLEG00000004633) #13 SYNDIG1L (ENSDLEG00000004630) #14 NPC2 (ENSDLEG00000004626) #15 ISCA2 (ENSDLEG00000004621) #16 ENSDLEG00000004618 #17 ENSDLEG00000004617 ENSDLEG00000004614 ENSDLEG00000004609 AREL1 (ENSDLEG00000004596) #18 FCF1 (ENSDLEG00000004582) #19 YLPM1 (ENSDLEG00000004568) #20 PROX2 (ENSDLEG00000004556) #21 DLST (ENSDLEG00000004541) #22 RPS6KL1 (ENSDLEG00000004528) #23 PGF (ENSDLEG00000004519) #24 EIF2B2 (ENSDLEG00000004507) #25 MLH3 (ENSDLEG00000004489) #26 ACYP1 (ENSDLEG00000004481) ZC2HC1C (ENSDLEG00000004476) #28 NEK9 (ENSDLEG00000004467) #29 TMED10 (ENSDLEG00000004453) #30 FOS (ENSDLEG00000004446) #31 JDP2 (ENSDLEG00000004438) #32 BATF (ENSDLEG00000004433) #33 ENSDLEG00000004427 FLVCR2 (ENSDLEG00000004419) #34 ENSDLEG00000004414 #36 TTLL5 (ENSDLEG00000004346) #35 Suina ANCESTRAL SPECIES 24 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00900000143158 ENSGT00940000156723 #18 ENSGT00940000153117.B.c.a ##19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.f #34 ENSGT00390000010925 #36 ENSGT00940000162939 #35 ENSGT00940000155747 Chacoan peccary MODERN SPECIES 885 BBOF1 (ENSCWAG00000020575) #8 ALDH6A1 (ENSCWAG00000020593) #9 LIN52 (ENSCWAG00000020608) #10 VSX2 (ENSCWAG00000020616) #11 ABCD4 (ENSCWAG00000020632) #12 VRTN (ENSCWAG00000020682) #13 SYNDIG1L (ENSCWAG00000020686) #14 NPC2 (ENSCWAG00000020691) #15 ENSCWAG00000020697 #16 LTBP2 (ENSCWAG00000020735) #17 ENSCWAG00000020814 AREL1 (ENSCWAG00000020824) #18 FCF1 (ENSCWAG00000020846) ##19 YLPM1 (ENSCWAG00000020891) #20 ENSCWAG00000020923 #21 DLST (ENSCWAG00000020938) #22 RPS6KL1 (ENSCWAG00000020956) #23 PGF (ENSCWAG00000020978) #24 EIF2B2 (ENSCWAG00000021011) #25 MLH3 (ENSCWAG00000021039) #26 ENSCWAG00000021059 ENSCWAG00000021069 #28 NEK9 (ENSCWAG00000021083) #29 TMED10 (ENSCWAG00000021099) #30 FOS (ENSCWAG00000021112) #31 JDP2 (ENSCWAG00000021133) #32 BATF (ENSCWAG00000021146) #33 FLVCR2 (ENSCWAG00000021161) #34 ERG28 (ENSCWAG00000021179) #36 TTLL5 (ENSCWAG00000021198) #35 TGFB3 (ENSCWAG00000021233) Pig MODERN SPECIES 15 BBOF1 (ENSSSCG00000002356) #8 ALDH6A1 (ENSSSCG00000002357) #9 LIN52 (ENSSSCG00000055314) #10 VSX2 (ENSSSCG00000002363) #11 ABCD4 (ENSSSCG00000038231) #12 VRTN (ENSSSCG00000002361) #13 SYNDIG1L (ENSSSCG00000025000) #14 NPC2 (ENSSSCG00000002366) #15 ISCA2 (ENSSSCG00000002367) #16 LTBP2 (ENSSSCG00000002368) #17 ENSSSCG00000031305 AREL1 (ENSSSCG00000002370) #18 FCF1 (ENSSSCG00000039202) ##19 YLPM1 (ENSSSCG00000002372) #20 PROX2 (ENSSSCG00000002373) #21 DLST (ENSSSCG00000002374) #22 RPS6KL1 (ENSSSCG00000002375) #23 PGF (ENSSSCG00000050616) #24 EIF2B2 (ENSSSCG00000002377) #25 ENSSSCG00000051291 MLH3 (ENSSSCG00000002378) #26 ENSSSCG00000002379 ZC2HC1C (ENSSSCG00000002380) #28 NEK9 (ENSSSCG00000002381) #29 TMED10 (ENSSSCG00000035684) #30 FOS (ENSSSCG00000002383) #31 JDP2 (ENSSSCG00000035895) #32 BATF (ENSSSCG00000055470) #33 FLVCR2 (ENSSSCG00000021606) #34 ERG28 (ENSSSCG00000036494) #36 TTLL5 (ENSSSCG00000025984) #35 Eulipotyphla ANCESTRAL SPECIES ENSGT00930000151014 #22 Hedgehog MODERN SPECIES 2051 DLST (ENSEEUG00000005769) #22 Common shrew MODERN SPECIES 1455 DLST (ENSSARG00000004980) #22 Atlantogenata ANCESTRAL SPECIES 8 ENSGT01100000263540.A.b #7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Afrotheria ANCESTRAL SPECIES 6 ENSGT01100000263540.A.b #7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Tenrec MODERN SPECIES 1947 AREL1 (ENSETEG00000009057) #18 FCF1 (ENSETEG00000009062) #19 YLPM1 (ENSETEG00000009066) #20 DLST (ENSETEG00000009071) #22 Afrotheria_a ANCESTRAL SPECIES 6 ENSGT01100000263540.A.b #7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B.d #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Elephant MODERN SPECIES 602 ENTPD5 (ENSLAFG00000010902) #7 BBOF1 (ENSLAFG00000002530) #8 ALDH6A1 (ENSLAFG00000002533) #9 LIN52 (ENSLAFG00000002534) #10 VSX2 (ENSLAFG00000002863) #11 ABCD4 (ENSLAFG00000002865) #12 VRTN (ENSLAFG00000026239) #13 SYNDIG1L (ENSLAFG00000004416) #14 NPC2 (ENSLAFG00000002876) #15 ISCA2 (ENSLAFG00000001607) #16 LTBP2 (ENSLAFG00000001609) #17 AREL1 (ENSLAFG00000002793) #18 ENSLAFG00000000724 #19 YLPM1 (ENSLAFG00000012536) #20 PROX2 (ENSLAFG00000012545) #21 DLST (ENSLAFG00000012552) #22 RPS6KL1 (ENSLAFG00000032632) #23 PGF (ENSLAFG00000016611) #24 EIF2B2 (ENSLAFG00000016616) #25 MLH3 (ENSLAFG00000022310) #26 ENSLAFG00000016628 ZC2HC1C (ENSLAFG00000023104) #28 NEK9 (ENSLAFG00000013150) #29 TMED10 (ENSLAFG00000022769) #30 FOS (ENSLAFG00000029435) #31 JDP2 (ENSLAFG00000025757) #32 BATF (ENSLAFG00000011315) #33 FLVCR2 (ENSLAFG00000014461) #34 ERG28 (ENSLAFG00000004755) #36 TTLL5 (ENSLAFG00000007694) #35 TGFB3 (ENSLAFG00000022584) Hyrax MODERN SPECIES 1571 YLPM1 (ENSPCAG00000006232) #20 PROX2 (ENSPCAG00000006424) #21 DLST (ENSPCAG00000006509) #22 ENSPCAG00000006580 #23 Xenarthra ANCESTRAL SPECIES 20 ENSGT00390000015152 ENSGT01100000263540.A.b #7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00530000064848 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Sloth MODERN SPECIES 1768 ENSCHOG00000007501 #22 Armadillo MODERN SPECIES 1229 COQ6 (ENSDNOG00000015448) ENTPD5 (ENSDNOG00000039070) #7 BBOF1 (ENSDNOG00000024781) #8 ALDH6A1 (ENSDNOG00000024213) #9 LIN52 (ENSDNOG00000038226) #10 VSX2 (ENSDNOG00000005036) #11 ENSDNOG00000032858 ABCD4 (ENSDNOG00000008122) #12 SYNDIG1L (ENSDNOG00000032053) #14 ENSDNOG00000016210 #15 ISCA2 (ENSDNOG00000034125) #16 LTBP2 (ENSDNOG00000016211) #17 AREL1 (ENSDNOG00000003340) #18 YLPM1 (ENSDNOG00000039154) #20 PROX2 (ENSDNOG00000005528) #21 DLST (ENSDNOG00000033083) #22 RPS6KL1 (ENSDNOG00000045055) #23 PGF (ENSDNOG00000042336) #24 EIF2B2 (ENSDNOG00000032838) #25 MLH3 (ENSDNOG00000048962) #26 ENSDNOG00000047029 ZC2HC1C (ENSDNOG00000046626) #28 NEK9 (ENSDNOG00000001965) #29 TMED10 (ENSDNOG00000019851) #30 FOS (ENSDNOG00000031516) #31 ENSDNOG00000038922 JDP2 (ENSDNOG00000033141) #32 BATF (ENSDNOG00000047121) #33 FLVCR2 (ENSDNOG00000034014) #34 ERG28 (ENSDNOG00000017697) #36 ENSDNOG00000004904 Marsupialia ANCESTRAL SPECIES ENSGT01040000244584 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Marsupialia_b ANCESTRAL SPECIES ENSGT01040000244584 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Diprotodontia ANCESTRAL SPECIES ENSGT01040000244584 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000155070 ENSGT00940000162651 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 Diprotodontia_a ANCESTRAL SPECIES 1 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008992.b ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000006223 #15 ENSGT00390000005700 #16 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Common wonbat MODERN SPECIES 1131 ENSVURG00010018393 #8 ALDH6A1 (ENSVURG00010018373) #9 ENSVURG00010018361 LIN52 (ENSVURG00010018345) #10 VSX2 (ENSVURG00010018334) #11 ABCD4 (ENSVURG00010018325) #12 VRTN (ENSVURG00010018318) #13 SYNDIG1L (ENSVURG00010018306) #14 NPC2 (ENSVURG00010018300) #15 ENSVURG00010018290 #16 LTBP2 (ENSVURG00010018263) #17 AREL1 (ENSVURG00010018228) #18 FCF1 (ENSVURG00010018218) #19 YLPM1 (ENSVURG00010018201) #20 ENSVURG00010018192 #21 DLST (ENSVURG00010018183) #22 RPS6KL1 (ENSVURG00010018173) #23 PGF (ENSVURG00010018167) #24 EIF2B2 (ENSVURG00010018164) #25 MLH3 (ENSVURG00010018146) #26 ENSVURG00010018133 ENSVURG00010018132 #28 NEK9 (ENSVURG00010018126) #29 TMED10 (ENSVURG00010018116) #30 FOS (ENSVURG00010018097) #31 JDP2 (ENSVURG00010018087) #32 ENSVURG00010018078 BATF (ENSVURG00010018071) #33 FLVCR2 (ENSVURG00010018065) #34 TTLL5 (ENSVURG00010016488) #35 ENSVURG00010016321 koala MODERN SPECIES 24 BBOF1 (ENSPCIG00000015946) #8 ALDH6A1 (ENSPCIG00000010683) #9 ENSPCIG00000010654 LIN52 (ENSPCIG00000034115) #10 VSX2 (ENSPCIG00000010627) #11 ABCD4 (ENSPCIG00000010614) #12 VRTN (ENSPCIG00000008700) #13 SYNDIG1L (ENSPCIG00000008703) #14 ENSPCIG00000008706 #15 ENSPCIG00000033435 #16 LTBP2 (ENSPCIG00000008717) #17 AREL1 (ENSPCIG00000008724) #18 FCF1 (ENSPCIG00000008728) #19 YLPM1 (ENSPCIG00000008730) #20 ENSPCIG00000008736 #21 DLST (ENSPCIG00000008737) #22 RPS6KL1 (ENSPCIG00000008738) #23 PGF (ENSPCIG00000008740) #24 EIF2B2 (ENSPCIG00000008741) #25 MLH3 (ENSPCIG00000036351) #26 ENSPCIG00000008743 ENSPCIG00000008744 #28 NEK9 (ENSPCIG00000008745) #29 TMED10 (ENSPCIG00000008746) #30 FOS (ENSPCIG00000008747) #31 JDP2 (ENSPCIG00000030932) #32 BATF (ENSPCIG00000002791) #33 FLVCR2 (ENSPCIG00000002780) #34 ERG28 (ENSPCIG00000002771) #36 ENSPCIG00000002659 TGFB3 (ENSPCIG00000002617) Wallaby MODERN SPECIES 2821 DLST (ENSMEUG00000004563) #22 Tasmanian devil MODERN SPECIES 1 ENTPD5 (ENSSHAG00000022376) #7 BBOF1 (ENSSHAG00000018550) #8 ALDH6A1 (ENSSHAG00000018886) #9 LIN52 (ENSSHAG00000021401) #10 VSX2 (ENSSHAG00000028523) #11 ABCD4 (ENSSHAG00000018805) #12 VRTN (ENSSHAG00000021665) #13 SYNDIG1L (ENSSHAG00000018764) #14 ENSSHAG00000018714 #15 ISCA2 (ENSSHAG00000025770) #16 LTBP2 (ENSSHAG00000018569) #17 AREL1 (ENSSHAG00000018445) #18 FCF1 (ENSSHAG00000018398) #19 ENSSHAG00000018304 #21 YLPM1 (ENSSHAG00000018328) #20 DLST (ENSSHAG00000031624) #22 RPS6KL1 (ENSSHAG00000027019) #23 PGF (ENSSHAG00000029245) #24 EIF2B2 (ENSSHAG00000023868) #25 MLH3 (ENSSHAG00000018012) #26 ENSSHAG00000029322 ENSSHAG00000017992 #28 NEK9 (ENSSHAG00000017943) #29 TMED10 (ENSSHAG00000028092) #30 FOS (ENSSHAG00000017780) #31 JDP2 (ENSSHAG00000025173) #32 ENSSHAG00000029697 BATF (ENSSHAG00000023550) #33 FLVCR2 (ENSSHAG00000016893) #34 ERG28 (ENSSHAG00000020554) #36 ENSSHAG00000016129 Opossum MODERN SPECIES BBOF1 (ENSMODG00000006384) #8 ALDH6A1 (ENSMODG00000006429) #9 LIN52 (ENSMODG00000006397) #10 VSX2 (ENSMODG00000006374) #11 ABCD4 (ENSMODG00000006369) #12 VRTN (ENSMODG00000006340) #13 ENSMODG00000024016 #14 ENSMODG00000006270 #15 ISCA2 (ENSMODG00000006248) #16 LTBP2 (ENSMODG00000006244) #17 ENSMODG00000029071 AREL1 (ENSMODG00000006202) #18 FCF1 (ENSMODG00000006179) #19 YLPM1 (ENSMODG00000006168) #20 ENSMODG00000006137 #21 DLST (ENSMODG00000006129) #22 RPS6KL1 (ENSMODG00000006093) #23 ENSMODG00000006071 #24 ENSMODG00000006061 #25 MLH3 (ENSMODG00000006037) #26 ENSMODG00000006014 ENSMODG00000006002 #28 NEK9 (ENSMODG00000005989) #29 TMED10 (ENSMODG00000005949) #30 FOS (ENSMODG00000005927) #31 ENSMODG00000041453 JDP2 (ENSMODG00000051073) #32 ENSMODG00000049733 BATF (ENSMODG00000005905) #33 ENSMODG00000005902 ENSMODG00000047729 Platypus MODERN SPECIES ENSOANG00000049648 #7 PTGR2 (ENSOANG00000048501) ZNF410 (ENSOANG00000040286) COQ6 (ENSOANG00000040258) BBOF1 (ENSOANG00000008768) #8 ALDH6A1 (ENSOANG00000043355) #9 LIN52 (ENSOANG00000048133) #10 ABCD4 (ENSOANG00000045221) #12 ENSOANG00000042721 #15 ENSOANG00000036503 ENSOANG00000051080 #17 AREL1 (ENSOANG00000002627) #18 FCF1 (ENSOANG00000039099) #19 YLPM1 (ENSOANG00000009814) #20 ENSOANG00000009815 #21 DLST (ENSOANG00000039815) #22 RPS6KL1 (ENSOANG00000048500) #23 PGF (ENSOANG00000047675) #24 EIF2B2 (ENSOANG00000043193) #25 ENSOANG00000043220 #26 ENSOANG00000039964 NEK9 (ENSOANG00000007750) #29 TMED10 (ENSOANG00000045312) #30 FOS (ENSOANG00000005064) #31 ENSOANG00000046733 #33 FLVCR2 (ENSOANG00000005066) #34 ERG28 (ENSOANG00000005067) #36 ENSOANG00000005068 TGFB3 (ENSOANG00000046243) IFT43 (ENSOANG00000038679) #37 GPATCH2L (ENSOANG00000044936) Sauria ANCESTRAL SPECIES 3 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Archelosauria ANCESTRAL SPECIES 2 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Archosauria ANCESTRAL SPECIES 5 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Aves ANCESTRAL SPECIES 2 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Neognathae ANCESTRAL SPECIES 4 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Neognathae_b ANCESTRAL SPECIES 6 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.i #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Neognathae_c ANCESTRAL SPECIES 6 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.i #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Golden eagle MODERN SPECIES 11 BBOF1 (ENSACCG00020002890) #8 ALDH6A1 (ENSACCG00020002831) #9 LIN52 (ENSACCG00020002790) #10 VSX2 (ENSACCG00020002778) #11 ENSACCG00020002758 ABCD4 (ENSACCG00020002740) #12 VRTN (ENSACCG00020002717) #13 SYNDIG1L (ENSACCG00020002699) #14 ISCA2 (ENSACCG00020002695) #16 NPC2 (ENSACCG00020002688) #15 LTBP2 (ENSACCG00020002582) #17 AREL1 (ENSACCG00020002407) #18 FCF1 (ENSACCG00020002385) #19 YLPM1 (ENSACCG00020002356) #20 PROX2 (ENSACCG00020002325) #21 DLST (ENSACCG00020002299) #22 RPS6KL1 (ENSACCG00020002260) #23 PGF (ENSACCG00020002218) #24 EIF2B2 (ENSACCG00020002164) #25 MLH3 (ENSACCG00020002145) #26 ENSACCG00020002134 ZC2HC1C (ENSACCG00020002116) #28 NEK9 (ENSACCG00020002085) #29 TMED10 (ENSACCG00020002055) #30 FOS (ENSACCG00020002039) #31 JDP2 (ENSACCG00020002026) #32 BATF (ENSACCG00020002009) #33 FLVCR2 (ENSACCG00020001984) #34 ERG28 (ENSACCG00020001961) #36 ENSACCG00020001819 TGFB3 (ENSACCG00020001694) Kakapo MODERN SPECIES 21 ENTPD5 (ENSSHBG00005002275) #7 ALDH6A1 (ENSSHBG00005002249) #9 LIN52 (ENSSHBG00005002241) #10 VSX2 (ENSSHBG00005002229) #11 ABCD4 (ENSSHBG00005002203) #12 VRTN (ENSSHBG00005002185) #13 SYNDIG1L (ENSSHBG00005002175) #14 ISCA2 (ENSSHBG00005002165) #16 NPC2 (ENSSHBG00005002154) #15 ENSSHBG00005002127 #17 AREL1 (ENSSHBG00005002081) #18 FCF1 (ENSSHBG00005002041) #19 ENSSHBG00005002015 #20 ENSSHBG00005001994 #20 PROX2 (ENSSHBG00005001976) #21 DLST (ENSSHBG00005001954) #22 RPS6KL1 (ENSSHBG00005001934) #23 PGF (ENSSHBG00005001915) #24 EIF2B2 (ENSSHBG00005001888) #25 ENSSHBG00005001871 MLH3 (ENSSHBG00005001837) #26 ZC2HC1C (ENSSHBG00005001804) #28 NEK9 (ENSSHBG00005001722) #29 TMED10 (ENSSHBG00005001619) #30 FOS (ENSSHBG00005001582) #31 JDP2 (ENSSHBG00005001554) #32 BATF (ENSSHBG00005001532) #33 FLVCR2 (ENSSHBG00005001491) #34 ERG28 (ENSSHBG00005001459) #36 ENSSHBG00005001427 TGFB3 (ENSSHBG00005000556) Passeriformes ANCESTRAL SPECIES 5 ENSGT01100000263540.A.b #7 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.j #34 ENSGT01030000234625.B.d.i #34 ENSGT00390000010925 #36 ENSGT00940000162910 Great tit MODERN SPECIES 25 ALDH6A1 (ENSPMJG00000016693) #9 LIN52 (ENSPMJG00000016694) #10 VSX2 (ENSPMJG00000016695) #11 ENSPMJG00000016696 ABCD4 (ENSPMJG00000016697) #12 VRTN (ENSPMJG00000016698) #13 SYNDIG1L (ENSPMJG00000016699) #14 ISCA2 (ENSPMJG00000016700) #16 NPC2 (ENSPMJG00000016701) #15 LTBP2 (ENSPMJG00000016702) #17 AREL1 (ENSPMJG00000016703) #18 FCF1 (ENSPMJG00000016704) #19 YLPM1 (ENSPMJG00000016705) #20 ENSPMJG00000016727 PROX2 (ENSPMJG00000016728) #21 DLST (ENSPMJG00000016729) #22 RPS6KL1 (ENSPMJG00000016730) #23 PGF (ENSPMJG00000016731) #24 EIF2B2 (ENSPMJG00000016732) #25 MLH3 (ENSPMJG00000016733) #26 ENSPMJG00000016734 ENSPMJG00000016735 #28 NEK9 (ENSPMJG00000016739) #29 TMED10 (ENSPMJG00000016820) #30 FOS (ENSPMJG00000016821) #31 JDP2 (ENSPMJG00000016823) #32 BATF (ENSPMJG00000016824) #33 ENSPMJG00000016825 #34 ENSPMJG00000016826 #34 ERG28 (ENSPMJG00000016827) #36 ENSPMJG00000016828 Passeriformes_d ANCESTRAL SPECIES 5 ENSGT01100000263540.A.b #7 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.j #34 ENSGT01030000234625.B.d.i #34 ENSGT00390000010925 #36 ENSGT00940000162910 Flycatcher MODERN SPECIES 24 ALDH6A1 (ENSFALG00000024159) #9 LIN52 (ENSFALG00000028779) #10 VSX2 (ENSFALG00000006274) #11 ENSFALG00000006277 ABCD4 (ENSFALG00000006280) #12 VRTN (ENSFALG00000015230) #13 SYNDIG1L (ENSFALG00000006284) #14 ENSFALG00000028034 #16 ENSFALG00000006290 #15 LTBP2 (ENSFALG00000006295) #17 ENSFALG00000026806 AREL1 (ENSFALG00000006298) #18 FCF1 (ENSFALG00000006301) #19 YLPM1 (ENSFALG00000006304) #20 PROX2 (ENSFALG00000006312) #21 DLST (ENSFALG00000006316) #22 RPS6KL1 (ENSFALG00000006331) #23 PGF (ENSFALG00000028486) #24 EIF2B2 (ENSFALG00000006338) #25 MLH3 (ENSFALG00000006344) #26 ENSFALG00000006347 ENSFALG00000006348 #28 NEK9 (ENSFALG00000006350) #29 TMED10 (ENSFALG00000025099) #30 FOS (ENSFALG00000024693) #31 JDP2 (ENSFALG00000006358) #32 BATF (ENSFALG00000025671) #33 FLVCR2 (ENSFALG00000023021) #34 ERG28 (ENSFALG00000006377) #36 ENSFALG00000006387 TGFB3 (ENSFALG00000006413) Passeriformes_g ANCESTRAL SPECIES ENSGT01100000263540.A.b #7 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.j #34 ENSGT01030000234625.B.d.i #34 ENSGT00390000010925 #36 ENSGT00940000162910 Passeroidea ANCESTRAL SPECIES 1 ENSGT01100000263540.A.b #7 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.j #34 ENSGT01030000234625.B.d.i #34 ENSGT00390000010925 #36 ENSGT00940000162910 Zebra finch MODERN SPECIES 27 COQ6 (ENSTGUG00000012085) ENTPD5 (ENSTGUG00000023657) #7 ALDH6A1 (ENSTGUG00000014114) #9 LIN52 (ENSTGUG00000023527) #10 VSX2 (ENSTGUG00000012109) #11 ABCD4 (ENSTGUG00000012116) #12 VRTN (ENSTGUG00000012125) #13 SYNDIG1L (ENSTGUG00000022036) #14 ISCA2 (ENSTGUG00000016281) #16 NPC2 (ENSTGUG00000016271) #15 LTBP2 (ENSTGUG00000012131) #17 AREL1 (ENSTGUG00000012150) #18 FCF1 (ENSTGUG00000020479) #19 YLPM1 (ENSTGUG00000012165) #20 PROX2 (ENSTGUG00000012170) #21 DLST (ENSTGUG00000012171) #22 RPS6KL1 (ENSTGUG00000012186) #23 PGF (ENSTGUG00000019217) #24 EIF2B2 (ENSTGUG00000012191) #25 MLH3 (ENSTGUG00000012203) #26 ACYP1 (ENSTGUG00000012209) ENSTGUG00000020837 #28 NEK9 (ENSTGUG00000012213) #29 TMED10 (ENSTGUG00000028035) #30 FOS (ENSTGUG00000012217) #31 BATF (ENSTGUG00000028382) #33 ENSTGUG00000012221 #34 ENSTGUG00000024811 #34 ERG28 (ENSTGUG00000020427) #36 ENSTGUG00000012226 TGFB3 (ENSTGUG00000019296) Common canary MODERN SPECIES 3 ENTPD5 (ENSSCAG00000010262) #7 ALDH6A1 (ENSSCAG00000010194) #9 LIN52 (ENSSCAG00000010182) #10 VSX2 (ENSSCAG00000010180) #11 ENSSCAG00000010166 ABCD4 (ENSSCAG00000010160) #12 VRTN (ENSSCAG00000010157) #13 SYNDIG1L (ENSSCAG00000010118) #14 ISCA2 (ENSSCAG00000010111) #16 NPC2 (ENSSCAG00000010103) #15 LTBP2 (ENSSCAG00000010015) #17 AREL1 (ENSSCAG00000009993) #18 FCF1 (ENSSCAG00000009987) #19 YLPM1 (ENSSCAG00000009864) #20 PROX2 (ENSSCAG00000009845) #21 DLST (ENSSCAG00000009837) #22 RPS6KL1 (ENSSCAG00000009834) #23 PGF (ENSSCAG00000009832) #24 EIF2B2 (ENSSCAG00000009821) #25 MLH3 (ENSSCAG00000009812) #26 ENSSCAG00000009801 ENSSCAG00000009797 #28 NEK9 (ENSSCAG00000009723) #29 TMED10 (ENSSCAG00000009702) #30 FOS (ENSSCAG00000009700) #31 JDP2 (ENSSCAG00000009696) #32 BATF (ENSSCAG00000009693) #33 FLVCR2 (ENSSCAG00000009666) #34 ERG28 (ENSSCAG00000009658) #36 ENSSCAG00000009627 TGFB3 (ENSSCAG00000009618) Medium ground finch MODERN SPECIES 4 FAM161B (ENSGFOG00000003198) COQ6 (ENSGFOG00000002978) ENTPD5 (ENSGFOG00000002920) #7 ALDH6A1 (ENSGFOG00000002901) #9 VSX2 (ENSGFOG00000002875) #11 ENSGFOG00000002748 ABCD4 (ENSGFOG00000002710) #12 VRTN (ENSGFOG00000002699) #13 SYNDIG1L (ENSGFOG00000002688) #14 ISCA2 (ENSGFOG00000002678) #16 NPC2 (ENSGFOG00000002662) #15 AREL1 (ENSGFOG00000002509) #18 FCF1 (ENSGFOG00000002486) #19 YLPM1 (ENSGFOG00000002443) #20 PROX2 (ENSGFOG00000002426) #21 DLST (ENSGFOG00000002394) #22 RPS6KL1 (ENSGFOG00000002379) #23 PGF (ENSGFOG00000002365) #24 EIF2B2 (ENSGFOG00000002313) #25 MLH3 (ENSGFOG00000002274) #26 ENSGFOG00000002259 ZC2HC1C (ENSGFOG00000002249) #28 NEK9 (ENSGFOG00000002105) #29 TMED10 (ENSGFOG00000002078) #30 JDP2 (ENSGFOG00000002072) #32 BATF (ENSGFOG00000002062) #33 FLVCR2 (ENSGFOG00000001853) #34 ERG28 (ENSGFOG00000001835) #36 ENSGFOG00000001672 TGFB3 (ENSGFOG00000001638) IFT43 (ENSGFOG00000001630) #37 Galloanserae ANCESTRAL SPECIES 4 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Phasianidae ANCESTRAL SPECIES 4 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Japanese quail MODERN SPECIES 23 ENSCJPG00005019186 ALDH6A1 (ENSCJPG00005019187) #9 LIN52 (ENSCJPG00005019214) #10 VSX2 (ENSCJPG00005019215) #11 ENSCJPG00005019216 ABCD4 (ENSCJPG00005019217) #12 VRTN (ENSCJPG00005019218) #13 SYNDIG1L (ENSCJPG00005019220) #14 ISCA2 (ENSCJPG00005019221) #16 NPC2 (ENSCJPG00005019222) #15 LTBP2 (ENSCJPG00005019223) #17 AREL1 (ENSCJPG00005019225) #18 FCF1 (ENSCJPG00005019226) #19 YLPM1 (ENSCJPG00005019228) #20 PROX2 (ENSCJPG00005019240) #21 DLST (ENSCJPG00005019241) #22 RPS6KL1 (ENSCJPG00005019242) #23 PGF (ENSCJPG00005019243) #24 EIF2B2 (ENSCJPG00005019244) #25 MLH3 (ENSCJPG00005019245) #26 ENSCJPG00005019246 ZC2HC1C (ENSCJPG00005019247) #28 NEK9 (ENSCJPG00005019248) #29 TMED10 (ENSCJPG00005019249) #30 FOS (ENSCJPG00005019250) #31 JDP2 (ENSCJPG00005019251) #32 BATF (ENSCJPG00005019252) #33 FLVCR2 (ENSCJPG00005019253) #34 ERG28 (ENSCJPG00005019254) #36 ENSCJPG00005019256 TGFB3 (ENSCJPG00005019265) Phasianidae_b ANCESTRAL SPECIES 3 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Chicken MODERN SPECIES 34 ENTPD5 (ENSGALG00010006568) #7 ALDH6A1 (ENSGALG00010006580) #9 LIN52 (ENSGALG00010006619) #10 VSX2 (ENSGALG00010006231) #11 ENSGALG00010006291 ABCD4 (ENSGALG00010006311) #12 VRTN (ENSGALG00010006280) #13 SYNDIG1L (ENSGALG00010006328) #14 ISCA2 (ENSGALG00010004380) #16 NPC2 (ENSGALG00010004307) #15 LTBP2 (ENSGALG00010004325) #17 AREL1 (ENSGALG00010005981) #18 FCF1 (ENSGALG00010005989) #19 YLPM1 (ENSGALG00010005998) #20 PROX2 (ENSGALG00010005943) #21 DLST (ENSGALG00010006085) #22 RPS6KL1 (ENSGALG00010006100) #23 PGF (ENSGALG00010006107) #24 EIF2B2 (ENSGALG00010006113) #25 MLH3 (ENSGALG00010006123) #26 ACYP1 (ENSGALG00010006128) ZC2HC1C (ENSGALG00010006135) #28 NEK9 (ENSGALG00010006177) #29 TMED10 (ENSGALG00010006188) #30 FOS (ENSGALG00010006212) #31 JDP2 (ENSGALG00010004473) #32 BATF (ENSGALG00010004553) #33 FLVCR2 (ENSGALG00010005057) #34 C5H14orf1 (ENSGALG00010005077) #36 TTLL5 (ENSGALG00010005107) TGFB3 (ENSGALG00010005146) Turkey MODERN SPECIES 25 BBOF1 (ENSMGAG00000012627) #8 ALDH6A1 (ENSMGAG00000012632) #9 LIN52 (ENSMGAG00000012638) #10 VSX2 (ENSMGAG00000012646) #11 ENSMGAG00000012650 ABCD4 (ENSMGAG00000012657) #12 VRTN (ENSMGAG00000012667) #13 SYNDIG1L (ENSMGAG00000012668) #14 ENSMGAG00000012674 #16 ENSMGAG00000012679 #15 LTBP2 (ENSMGAG00000012684) #17 AREL1 (ENSMGAG00000012699) #18 FCF1 (ENSMGAG00000012704) #19 YLPM1 (ENSMGAG00000012707) #20 PROX2 (ENSMGAG00000012715) #21 DLST (ENSMGAG00000012717) #22 RPS6KL1 (ENSMGAG00000012729) #23 ENSMGAG00000021471 #24 EIF2B2 (ENSMGAG00000012733) #25 MLH3 (ENSMGAG00000012735) #26 ENSMGAG00000012741 ZC2HC1C (ENSMGAG00000012742) #28 NEK9 (ENSMGAG00000012746) #29 TMED10 (ENSMGAG00000012754) #30 JDP2 (ENSMGAG00000012755) #32 BATF (ENSMGAG00000012758) #33 FLVCR2 (ENSMGAG00000012760) #34 ERG28 (ENSMGAG00000012763) #36 ENSMGAG00000012764 ENSMGAG00000012783 IFT43 (ENSMGAG00000012792) #37 Anatidae ANCESTRAL SPECIES 9 ENSGT01100000263540.A.b #7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 Pink-footed goose MODERN SPECIES 23 ENTPD5 (ENSABRG00000008136) #7 BBOF1 (ENSABRG00000008070) #8 ALDH6A1 (ENSABRG00000007631) #9 LIN52 (ENSABRG00000007580) #10 VSX2 (ENSABRG00000007568) #11 ABCD4 (ENSABRG00000007564) #12 VRTN (ENSABRG00000007556) #13 SYNDIG1L (ENSABRG00000007553) #14 ISCA2 (ENSABRG00000007546) #16 NPC2 (ENSABRG00000007540) #15 LTBP2 (ENSABRG00000006674) #17 AREL1 (ENSABRG00000006312) #18 FCF1 (ENSABRG00000006245) #19 YLPM1 (ENSABRG00000006121) #20 PROX2 (ENSABRG00000006090) #21 DLST (ENSABRG00000006045) #22 RPS6KL1 (ENSABRG00000006027) #23 PGF (ENSABRG00000006020) #24 EIF2B2 (ENSABRG00000005958) #25 MLH3 (ENSABRG00000005858) #26 ENSABRG00000005837 ZC2HC1C (ENSABRG00000005789) #28 NEK9 (ENSABRG00000005273) #29 TMED10 (ENSABRG00000005211) #30 FOS (ENSABRG00000005204) #31 JDP2 (ENSABRG00000005200) #32 BATF (ENSABRG00000005195) #33 FLVCR2 (ENSABRG00000004069) #34 ERG28 (ENSABRG00000003925) #36 ENSABRG00000002595 TGFB3 (ENSABRG00000002408) Duck MODERN SPECIES 23 COQ6 (ENSAPLG00000013830) ENTPD5 (ENSAPLG00000014079) #7 BBOF1 (ENSAPLG00000014370) #8 ALDH6A1 (ENSAPLG00000019703) #9 LIN52 (ENSAPLG00000014829) #10 ABCD4 (ENSAPLG00000014842) #12 VRTN (ENSAPLG00000015007) #13 SYNDIG1L (ENSAPLG00000015081) #14 ISCA2 (ENSAPLG00000022258) #16 NPC2 (ENSAPLG00000017454) #15 LTBP2 (ENSAPLG00000015140) #17 AREL1 (ENSAPLG00000001964) #18 FCF1 (ENSAPLG00000002613) #19 YLPM1 (ENSAPLG00000002844) #20 PROX2 (ENSAPLG00000024082) #21 DLST (ENSAPLG00000009194) #22 EIF2B2 (ENSAPLG00000010140) #25 ENSAPLG00000010239 #26 NEK9 (ENSAPLG00000010802) #29 TMED10 (ENSAPLG00000020865) #30 FOS (ENSAPLG00000020281) #31 JDP2 (ENSAPLG00000011380) #32 BATF (ENSAPLG00000024395) #33 FLVCR2 (ENSAPLG00000011656) #34 ERG28 (ENSAPLG00000011876) #36 ENSAPLG00000011877 TGFB3 (ENSAPLG00000012199) ENSAPLG00000012286 GPATCH2L (ENSAPLG00000012320) ESRRB (ENSAPLG00000012470) ANGEL1 (ENSAPLG00000012908) African ostrich MODERN SPECIES 477 ENTPD5 (ENSSCUG00000005345) #7 BBOF1 (ENSSCUG00000005343) #8 ALDH6A1 (ENSSCUG00000005337) #9 LIN52 (ENSSCUG00000005334) #10 ENSSCUG00000005330 ABCD4 (ENSSCUG00000005327) #12 VRTN (ENSSCUG00000005326) #13 SYNDIG1L (ENSSCUG00000005325) #14 ENSSCUG00000005324 NPC2 (ENSSCUG00000005322) #15 LTBP2 (ENSSCUG00000005321) #17 AREL1 (ENSSCUG00000005320) #18 FCF1 (ENSSCUG00000005319) #19 YLPM1 (ENSSCUG00000005318) #20 PROX2 (ENSSCUG00000005317) #21 DLST (ENSSCUG00000005316) #22 RPS6KL1 (ENSSCUG00000005315) #23 PGF (ENSSCUG00000005314) #24 EIF2B2 (ENSSCUG00000005313) #25 MLH3 (ENSSCUG00000005309) #26 ENSSCUG00000005308 ZC2HC1C (ENSSCUG00000005307) #28 NEK9 (ENSSCUG00000005285) #29 TMED10 (ENSSCUG00000005272) #30 JDP2 (ENSSCUG00000005270) #32 Australian saltwater crocodile MODERN SPECIES 64 BBOF1 (ENSCPRG00005004060) #8 ALDH6A1 (ENSCPRG00005004064) #9 LIN52 (ENSCPRG00005004069) #10 VSX2 (ENSCPRG00005004087) #11 ENSCPRG00005004091 ABCD4 (ENSCPRG00005004118) #12 VRTN (ENSCPRG00005004144) #13 SYNDIG1L (ENSCPRG00005004169) #14 ENSCPRG00005004172 NPC2 (ENSCPRG00005004174) #15 LTBP2 (ENSCPRG00005004192) #17 AREL1 (ENSCPRG00005004372) #18 FCF1 (ENSCPRG00005004669) #19 ENSCPRG00005004699 #20 PROX2 (ENSCPRG00005004701) #21 DLST (ENSCPRG00005004713) #22 RPS6KL1 (ENSCPRG00005004756) #23 PGF (ENSCPRG00005004776) #24 EIF2B2 (ENSCPRG00005004792) #25 MLH3 (ENSCPRG00005004921) #26 ENSCPRG00005004949 ZC2HC1C (ENSCPRG00005004999) #28 NEK9 (ENSCPRG00005005015) #29 TMED10 (ENSCPRG00005005026) #30 FOS (ENSCPRG00005005033) #31 JDP2 (ENSCPRG00005005039) #32 BATF (ENSCPRG00005005043) #33 FLVCR2 (ENSCPRG00005005058) #34 ERG28 (ENSCPRG00005005083) #36 ENSCPRG00005005097 TGFB3 (ENSCPRG00005005133) Cryptodira ANCESTRAL SPECIES 3 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Testudinoidea ANCESTRAL SPECIES 3 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Emydidae ANCESTRAL SPECIES 2 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00900000143573 Three-toed box turtle MODERN SPECIES 40 LIN52 (ENSTMTG00000011525) #10 VSX2 (ENSTMTG00000011538) #11 ENSTMTG00000011595 ABCD4 (ENSTMTG00000011713) #12 VRTN (ENSTMTG00000011752) #13 SYNDIG1L (ENSTMTG00000011761) #14 ENSTMTG00000011800 ENSTMTG00000011818 ISCA2 (ENSTMTG00000011837) #16 NPC2 (ENSTMTG00000011846) #15 LTBP2 (ENSTMTG00000011882) #17 AREL1 (ENSTMTG00000012332) #18 FCF1 (ENSTMTG00000014262) #19 YLPM1 (ENSTMTG00000014275) #20 PROX2 (ENSTMTG00000014292) #21 DLST (ENSTMTG00000014310) #22 RPS6KL1 (ENSTMTG00000014348) #23 PGF (ENSTMTG00000014442) #24 EIF2B2 (ENSTMTG00000014462) #25 MLH3 (ENSTMTG00000014498) #26 ENSTMTG00000014544 ZC2HC1C (ENSTMTG00000014553) #28 NEK9 (ENSTMTG00000014568) #29 TMED10 (ENSTMTG00000014603) #30 FOS (ENSTMTG00000014616) #31 JDP2 (ENSTMTG00000014629) #32 BATF (ENSTMTG00000014636) #33 FLVCR2 (ENSTMTG00000014652) #34 ERG28 (ENSTMTG00000014676) #36 ENSTMTG00000014814 TGFB3 (ENSTMTG00000016700) painted turtle MODERN SPECIES 13 BBOF1 (ENSCPBG00000026217) #8 ALDH6A1 (ENSCPBG00000026218) #9 LIN52 (ENSCPBG00000026219) #10 VSX2 (ENSCPBG00000026221) #11 ENSCPBG00000026223 ABCD4 (ENSCPBG00000026224) #12 VRTN (ENSCPBG00000026225) #13 SYNDIG1L (ENSCPBG00000026226) #14 ISCA2 (ENSCPBG00000026227) #16 NPC2 (ENSCPBG00000026228) #15 LTBP2 (ENSCPBG00000026229) #17 AREL1 (ENSCPBG00000026230) #18 FCF1 (ENSCPBG00000026231) #19 YLPM1 (ENSCPBG00000026232) #20 PROX2 (ENSCPBG00000026233) #21 DLST (ENSCPBG00000026234) #22 RPS6KL1 (ENSCPBG00000026235) #23 PGF (ENSCPBG00000026236) #24 EIF2B2 (ENSCPBG00000026237) #25 MLH3 (ENSCPBG00000026238) #26 ENSCPBG00000026240 ZC2HC1C (ENSCPBG00000026241) #28 NEK9 (ENSCPBG00000026242) #29 TMED10 (ENSCPBG00000026244) #30 FOS (ENSCPBG00000026248) #31 JDP2 (ENSCPBG00000026250) #32 BATF (ENSCPBG00000026252) #33 FLVCR2 (ENSCPBG00000026254) #34 ERG28 (ENSCPBG00000026257) #36 ENSCPBG00000026263 ENSCPBG00000026268 Testudinidae ANCESTRAL SPECIES 2 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Goode s thornscrub tortoise MODERN SPECIES 18 ALDH6A1 (ENSGEVG00005002696) #9 LIN52 (ENSGEVG00005002674) #10 VSX2 (ENSGEVG00005002657) #11 ENSGEVG00005002626 ABCD4 (ENSGEVG00005002587) #12 VRTN (ENSGEVG00005002571) #13 SYNDIG1L (ENSGEVG00005002558) #14 ISCA2 (ENSGEVG00005002545) #16 NPC2 (ENSGEVG00005002529) #15 LTBP2 (ENSGEVG00005002485) #17 AREL1 (ENSGEVG00005002458) #18 FCF1 (ENSGEVG00005002437) #19 YLPM1 (ENSGEVG00005002397) #20 ENSGEVG00005002378 PROX2 (ENSGEVG00005002365) #21 DLST (ENSGEVG00005002330) #22 RPS6KL1 (ENSGEVG00005002304) #23 PGF (ENSGEVG00005002282) #24 EIF2B2 (ENSGEVG00005002271) #25 MLH3 (ENSGEVG00005002234) #26 ENSGEVG00005002208 ZC2HC1C (ENSGEVG00005002199) #28 NEK9 (ENSGEVG00005002164) #29 TMED10 (ENSGEVG00005002145) #30 FOS (ENSGEVG00005002133) #31 JDP2 (ENSGEVG00005002120) #32 BATF (ENSGEVG00005002108) #33 FLVCR2 (ENSGEVG00005002085) #34 ERG28 (ENSGEVG00005002067) #36 ENSGEVG00005001531 TGFB3 (ENSGEVG00005001201) Abingdon island giant tortoise MODERN SPECIES 2201 VSX2 (ENSCABG00000022693) #11 ENSCABG00000022694 ENSCABG00000022695 #12 ENSCABG00000022697 #12 ENSCABG00000022698 #12 VRTN (ENSCABG00000022701) #13 SYNDIG1L (ENSCABG00000022702) #14 ENSCABG00000022705 ISCA2 (ENSCABG00000022706) #16 NPC2 (ENSCABG00000022707) #15 LTBP2 (ENSCABG00000022709) #17 AREL1 (ENSCABG00000022711) #18 FCF1 (ENSCABG00000022715) #19 YLPM1 (ENSCABG00000022719) #20 PROX2 (ENSCABG00000022729) #21 DLST (ENSCABG00000022730) #22 RPS6KL1 (ENSCABG00000022731) #23 PGF (ENSCABG00000022732) #24 EIF2B2 (ENSCABG00000022733) #25 MLH3 (ENSCABG00000022738) #26 ENSCABG00000022746 ENSCABG00000022749 #28 NEK9 (ENSCABG00000022754) #29 TMED10 (ENSCABG00000022757) #30 FOS (ENSCABG00000022762) #31 JDP2 (ENSCABG00000022764) #32 BATF (ENSCABG00000022766) #33 ENSCABG00000022767 #34 ENSCABG00000022769 #34 ERG28 (ENSCABG00000022770) #36 ENSCABG00000022772 Chinese turtle MODERN SPECIES 666 BBOF1 (ENSPSIG00000015556) #8 ALDH6A1 (ENSPSIG00000015581) #9 LIN52 (ENSPSIG00000015591) #10 VSX2 (ENSPSIG00000015600) #11 ENSPSIG00000015706 ABCD4 (ENSPSIG00000016190) #12 VRTN (ENSPSIG00000000381) #13 SYNDIG1L (ENSPSIG00000016403) #14 ISCA2 (ENSPSIG00000016409) #16 NPC2 (ENSPSIG00000016428) #15 LTBP2 (ENSPSIG00000016524) #17 AREL1 (ENSPSIG00000016885) #18 FCF1 (ENSPSIG00000016906) #19 YLPM1 (ENSPSIG00000016931) #20 PROX2 (ENSPSIG00000017015) #21 DLST (ENSPSIG00000017022) #22 RPS6KL1 (ENSPSIG00000017157) #23 PGF (ENSPSIG00000017412) #24 EIF2B2 (ENSPSIG00000017425) #25 MLH3 (ENSPSIG00000017451) #26 ENSPSIG00000017500 ZC2HC1C (ENSPSIG00000017503) #28 NEK9 (ENSPSIG00000017508) #29 TMED10 (ENSPSIG00000017584) #30 FOS (ENSPSIG00000017598) #31 JDP2 (ENSPSIG00000017647) #32 BATF (ENSPSIG00000017659) #33 FLVCR2 (ENSPSIG00000017663) #34 ERG28 (ENSPSIG00000017766) #36 ENSPSIG00000017794 TGFB3 (ENSPSIG00000017861) Lepidosauria ANCESTRAL SPECIES 24 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Episquamata ANCESTRAL SPECIES ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Laterata ANCESTRAL SPECIES 2 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a.f #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747 ENSGT00390000012060 #37 Common wall lizard MODERN SPECIES LIN52 (ENSPMRG00000008577) #10 VSX2 (ENSPMRG00000008567) #11 ENSPMRG00000008552 ABCD4 (ENSPMRG00000008533) #12 ENSPMRG00000008526 #13 ENSPMRG00000008522 #13 SYNDIG1L (ENSPMRG00000008514) #14 ENSPMRG00000008501 #14 ISCA2 (ENSPMRG00000008488) #16 NPC2 (ENSPMRG00000008478) #15 LTBP2 (ENSPMRG00000007807) #17 AREL1 (ENSPMRG00000007679) #18 FCF1 (ENSPMRG00000007667) #19 YLPM1 (ENSPMRG00000007645) #20 PROX2 (ENSPMRG00000007626) #21 DLST (ENSPMRG00000007614) #22 RPS6KL1 (ENSPMRG00000007595) #23 PGF (ENSPMRG00000007576) #24 EIF2B2 (ENSPMRG00000007566) #25 MLH3 (ENSPMRG00000007542) #26 ENSPMRG00000007523 ZC2HC1C (ENSPMRG00000007516) #28 ENSPMRG00000007335 #29 TMED10 (ENSPMRG00000007264) #30 ENSPMRG00000007248 #29 ENSPMRG00000007221 FOS (ENSPMRG00000007201) #31 JDP2 (ENSPMRG00000007196) #32 BATF (ENSPMRG00000007182) #33 FLVCR2 (ENSPMRG00000007159) #34 ERG28 (ENSPMRG00000007143) #36 Argentine black and white tegu MODERN SPECIES 14 BBOF1 (ENSSMRG00000012650) #8 ALDH6A1 (ENSSMRG00000012649) #9 LIN52 (ENSSMRG00000012646) #10 VSX2 (ENSSMRG00000012645) #11 ENSSMRG00000012641 ABCD4 (ENSSMRG00000012634) #12 VRTN (ENSSMRG00000012633) #13 SYNDIG1L (ENSSMRG00000012632) #14 ISCA2 (ENSSMRG00000012627) #16 NPC2 (ENSSMRG00000012626) #15 LTBP2 (ENSSMRG00000012625) #17 AREL1 (ENSSMRG00000012614) #18 FCF1 (ENSSMRG00000012613) #19 YLPM1 (ENSSMRG00000012612) #20 PROX2 (ENSSMRG00000012610) #21 DLST (ENSSMRG00000012609) #22 RPS6KL1 (ENSSMRG00000012608) #23 PGF (ENSSMRG00000012606) #24 EIF2B2 (ENSSMRG00000012590) #25 ENSSMRG00000012587 #26 ENSSMRG00000012585 #26 ENSSMRG00000012584 ZC2HC1C (ENSSMRG00000012583) #28 NEK9 (ENSSMRG00000012582) #29 TMED10 (ENSSMRG00000012581) #30 ENSSMRG00000012579 FOS (ENSSMRG00000012578) #31 JDP2 (ENSSMRG00000012575) #32 BATF (ENSSMRG00000012569) #33 FLVCR2 (ENSSMRG00000012568) #34 ERG28 (ENSSMRG00000012567) #36 Toxicofera ANCESTRAL SPECIES 5 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837.e #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Elapidae ANCESTRAL SPECIES 3 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837.e #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176.x #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Elapidae_a ANCESTRAL SPECIES 4 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837.e #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176.x #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Acanthophiinae ANCESTRAL SPECIES 6 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00390000007874 #13 ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000160884 #17 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837.e #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000160164 #24 ENSGT00550000074908 #25 ENSGT00800000124176.x #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693 #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.m #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 Mainland tiger snake MODERN SPECIES 8 BBOF1 (ENSNSUG00000003051) #8 ALDH6A1 (ENSNSUG00000003043) #9 LIN52 (ENSNSUG00000003041) #10 VSX2 (ENSNSUG00000003040) #11 ENSNSUG00000003039 ABCD4 (ENSNSUG00000003033) #12 VRTN (ENSNSUG00000003032) #13 SYNDIG1L (ENSNSUG00000003021) #14 ISCA2 (ENSNSUG00000003017) #16 NPC2 (ENSNSUG00000003016) #15 LTBP2 (ENSNSUG00000002986) #17 AREL1 (ENSNSUG00000002884) #18 FCF1 (ENSNSUG00000002881) #19 YLPM1 (ENSNSUG00000002397) #20 PROX2 (ENSNSUG00000002395) #21 DLST (ENSNSUG00000002388) #22 RPS6KL1 (ENSNSUG00000002351) #23 EIF2B2 (ENSNSUG00000002350) #25 MLH3 (ENSNSUG00000002069) #26 ENSNSUG00000002067 ZC2HC1C (ENSNSUG00000002058) #28 NEK9 (ENSNSUG00000002051) #29 TMED10 (ENSNSUG00000002049) #30 FOS (ENSNSUG00000002048) #31 JDP2 (ENSNSUG00000002045) #32 BATF (ENSNSUG00000002044) #33 ENSNSUG00000002043 #34 ENSNSUG00000002042 ENSNSUG00000002040 #34 ERG28 (ENSNSUG00000002030) #36 ENSNSUG00000002024 Eastern brown snake MODERN SPECIES 1 BBOF1 (ENSPTXG00000004390) #8 ALDH6A1 (ENSPTXG00000004391) #9 LIN52 (ENSPTXG00000004392) #10 VSX2 (ENSPTXG00000004393) #11 ENSPTXG00000004394 ABCD4 (ENSPTXG00000004395) #12 VRTN (ENSPTXG00000004398) #13 SYNDIG1L (ENSPTXG00000004399) #14 ISCA2 (ENSPTXG00000004401) #16 NPC2 (ENSPTXG00000004402) #15 LTBP2 (ENSPTXG00000004404) #17 AREL1 (ENSPTXG00000004408) #18 FCF1 (ENSPTXG00000004410) #19 YLPM1 (ENSPTXG00000004411) #20 PROX2 (ENSPTXG00000004414) #21 DLST (ENSPTXG00000004417) #22 RPS6KL1 (ENSPTXG00000004436) #23 ENSPTXG00000004462 PGF (ENSPTXG00000004465) #24 EIF2B2 (ENSPTXG00000004467) #25 ENSPTXG00000004470 #26 ENSPTXG00000004472 #26 ENSPTXG00000004474 ZC2HC1C (ENSPTXG00000004475) #28 NEK9 (ENSPTXG00000004480) #29 TMED10 (ENSPTXG00000004528) #30 FOS (ENSPTXG00000004529) #31 JDP2 (ENSPTXG00000004530) #32 BATF (ENSPTXG00000004531) #33 FLVCR2 (ENSPTXG00000004532) #34 ERG28 (ENSPTXG00000004533) #36 Blue-lipped sea krait MODERN SPECIES 7144 PROX2 (ENSLLTG00000005602) #21 DLST (ENSLLTG00000005584) #22 Indian cobra MODERN SPECIES VSX2 (ENSNNAG00000010585) #11 ENSNNAG00000010718 ABCD4 (ENSNNAG00000011119) #12 VRTN (ENSNNAG00000011891) #13 ENSNNAG00000011902 #14 ENSNNAG00000011932 #14 ENSNNAG00000011959 #14 ISCA2 (ENSNNAG00000011983) #16 NPC2 (ENSNNAG00000012028) #15 LTBP2 (ENSNNAG00000012406) #17 AREL1 (ENSNNAG00000016798) #18 FCF1 (ENSNNAG00000016842) #19 ENSNNAG00000016859 #20 ENSNNAG00000016875 #20 PROX2 (ENSNNAG00000016891) #21 DLST (ENSNNAG00000016902) #22 RPS6KL1 (ENSNNAG00000016916) #23 PGF (ENSNNAG00000016923) #24 EIF2B2 (ENSNNAG00000016926) #25 MLH3 (ENSNNAG00000016933) #26 ENSNNAG00000016948 ZC2HC1C (ENSNNAG00000016951) #28 NEK9 (ENSNNAG00000016962) #29 TMED10 (ENSNNAG00000016991) #30 FOS (ENSNNAG00000016993) #31 JDP2 (ENSNNAG00000016998) #32 BATF (ENSNNAG00000017004) #33 FLVCR2 (ENSNNAG00000017019) #34 ERG28 (ENSNNAG00000017050) #36 ENSNNAG00000017067 TGFB3 (ENSNNAG00000017102) Lizard MODERN SPECIES BBOF1 (ENSACAG00000016293) #8 ALDH6A1 (ENSACAG00000016307) #9 LIN52 (ENSACAG00000016339) #10 VSX2 (ENSACAG00000016343) #11 ENSACAG00000016356 ABCD4 (ENSACAG00000016423) #12 VRTN (ENSACAG00000016464) #13 SYNDIG1L (ENSACAG00000016466) #14 ENSACAG00000016482 #16 NPC2 (ENSACAG00000040505) #15 LTBP2 (ENSACAG00000016494) #17 AREL1 (ENSACAG00000016610) #18 FCF1 (ENSACAG00000037262) #19 YLPM1 (ENSACAG00000016685) #20 PROX2 (ENSACAG00000016714) #21 DLST (ENSACAG00000016718) #22 RPS6KL1 (ENSACAG00000016769) #23 PGF (ENSACAG00000016795) #24 EIF2B2 (ENSACAG00000016798) #25 MLH3 (ENSACAG00000016842) #26 ENSACAG00000016844 ZC2HC1C (ENSACAG00000016846) #28 NEK9 (ENSACAG00000016850) #29 TMED10 (ENSACAG00000045345) #30 FOS (ENSACAG00000016921) #31 JDP2 (ENSACAG00000042584) #32 BATF (ENSACAG00000016951) #33 FLVCR2 (ENSACAG00000016955) #34 ERG28 (ENSACAG00000038620) #36 ENSACAG00000044320 ENSACAG00000016982 tuatara MODERN SPECIES 522 ENTPD5 (ENSSPUG00000017101) #7 BBOF1 (ENSSPUG00000017078) #8 ALDH6A1 (ENSSPUG00000017066) #9 LIN52 (ENSSPUG00000017058) #10 VSX2 (ENSSPUG00000017050) #11 ENSSPUG00000017032 ABCD4 (ENSSPUG00000017009) #12 ISCA2 (ENSSPUG00000016966) #16 NPC2 (ENSSPUG00000016951) #15 LTBP2 (ENSSPUG00000015468) #17 AREL1 (ENSSPUG00000015123) #18 FCF1 (ENSSPUG00000015109) #19 ENSSPUG00000015096 #20 ENSSPUG00000014971 #20 ENSSPUG00000014927 ##21 DLST (ENSSPUG00000014913) #22 RPS6KL1 (ENSSPUG00000014833) #23 ENSSPUG00000014813 #24 EIF2B2 (ENSSPUG00000014804) #25 MLH3 (ENSSPUG00000014576) #26 ENSSPUG00000014488 ZC2HC1C (ENSSPUG00000014480) #28 NEK9 (ENSSPUG00000014413) #29 TMED10 (ENSSPUG00000014389) #30 FOS (ENSSPUG00000014379) #31 JDP2 (ENSSPUG00000014368) #32 BATF (ENSSPUG00000014361) #33 FLVCR2 (ENSSPUG00000014311) #34 ERG28 (ENSSPUG00000014300) #36 ENSSPUG00000014265 ENSSPUG00000014249 Anura ANCESTRAL SPECIES 46 ENSGT00390000010698 ENSGT00940000158098 ENSGT00940000159998 ENSGT00390000015152 ENSGT01100000263540.A.b #7 ENSGT00940000154427.A #8 ENSGT00940000156110 #9 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00950000182955.a.a.b #12 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00550000074908 #25 ENSGT00800000124176 #26 ENSGT00390000011103.B ENSGT00940000160947 #28 ENSGT00940000156145 #29 ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00940000161630 ENSGT00940000159745 #33 ENSGT01030000234625.B.d #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000153433.B.b.b ENSGT00390000012703.b Frog MODERN SPECIES 8 fam161b (ENSXETG00000030574) coq6 (ENSXETG00000002853) entpd5 (ENSXETG00000030591) #7 bbof1 (ENSXETG00000002847) #8 aldh6a1 (ENSXETG00000013304) #9 lin52 (ENSXETG00000027292) #10 vsx2 (ENSXETG00000013302) #11 abcd4 (ENSXETG00000027291) #12 npc2 (ENSXETG00000013295) #15 isca2 (ENSXETG00000031871) #16 arel1 (ENSXETG00000013271) #18 fcf1 (ENSXETG00000027288) #19 ylpm1 (ENSXETG00000013269) #20 ENSXETG00000041959 tmed10 (ENSXETG00000013236) #30 dlst (ENSXETG00000013264) #22 rps6kl1 (ENSXETG00000013263) #23 eif2b2 (ENSXETG00000013261) #25 mlh3 (ENSXETG00000013252) #26 ENSXETG00000040528 ENSXETG00000013249 #28 nek9 (ENSXETG00000013239) #29 fos (ENSXETG00000013238) #31 ENSXETG00000041470 batf (ENSXETG00000046017) #33 flvcr2 (ENSXETG00000027282) #34 erg28 (ENSXETG00000048974) #36 ttll5 (ENSXETG00000013220) ift43 (ENSXETG00000013218) esrrb (ENSXETG00000013217) vash1 (ENSXETG00000013214) Coelacanth MODERN SPECIES 226 BBOF1 (ENSLACG00000018403) #8 ALDH6A1 (ENSLACG00000018413) #9 VSX2 (ENSLACG00000018477) #11 ENSLACG00000018500 abcd4 (ENSLACG00000018527) #12 VRTN (ENSLACG00000018560) #13 ENSLACG00000018629 SYNDIG1L (ENSLACG00000018632) #14 ISCA2 (ENSLACG00000018726) #16 NPC2 (ENSLACG00000018729) #15 ENSLACG00000018740 AREL1 (ENSLACG00000018866) #18 fcf1 (ENSLACG00000018879) #19 YLPM1 (ENSLACG00000018883) #20 PROX2 (ENSLACG00000018909) #21 DLST (ENSLACG00000018918) #22 RPS6KL1 (ENSLACG00000018929) #23 ENSLACG00000018931 #24 GPR68 (ENSLACG00000018951) ccdc88c (ENSLACG00000018962) ENSLACG00000018969 PPP4R3A (ENSLACG00000018977) CATSPERB (ENSLACG00000018989) TC2N (ENSLACG00000019000) FBLN5 (ENSLACG00000019004) TRIP11 (ENSLACG00000019012) atxn3 (ENSLACG00000019017) CPSF2 (ENSLACG00000019024) SLC24A4 (ENSLACG00000019037) RIN3 (ENSLACG00000019047) LGMN (ENSLACG00000019056) Actinopterygii ANCESTRAL SPECIES 77 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00390000009517 ENSGT00620000087966.a ENSGT00950000183044.a.a.b ENSGT00630000089942 ENSGT00530000063651.b ENSGT00940000164710 ENSGT00390000006580 ENSGT00940000156829 ENSGT00970000197141 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000154297.A ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153433.A ENSGT00410000025698.b ENSGT00390000012060 #37 ENSGT00940000155747 ENSGT00940000162939 #35 ENSGT00940000162910 ENSGT00390000010925 #36 ENSGT01030000234625.B.d #34 ENSGT00940000159745 #33 ENSGT00940000155693 #32 ENSGT00940000159276 #31 Neopterygii ANCESTRAL SPECIES ENSGT00950000183147.A.a #14 ENSGT00390000005700 #16 ENSGT00390000006223 #15 ENSGT00390000009517 ENSGT00620000087966.a ENSGT00950000183044.a.a.b ENSGT00530000063651.b ENSGT00940000164710 ENSGT00390000006580 ENSGT00940000156829 ENSGT00970000197141 ENSGT00940000156723 #18 ENSGT00940000153117.B #19 ENSGT00440000039837 #20 ENSGT00940000154790.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000155454 ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153433.A ENSGT00410000025698.b ENSGT00390000012060 #37 ENSGT00940000155747 ENSGT00940000162939 #35 ENSGT00940000162910 ENSGT00390000010925 #36 ENSGT01030000234625.B.d #34 ENSGT00940000159745 #33 ENSGT00940000155693 #32 Osteoglossocephalai ANCESTRAL SPECIES 13 ENSGT00800000124176 #26 ENSGT00550000074908 #25 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000155693.b #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000155454 ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000160884 #17 ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776 #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 17 ENSGT00940000156145 #29 ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000160884 #17 ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 Euteleosteomorpha ANCESTRAL SPECIES 26 ENSGT00940000156145 #29 ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Acanthomorphata ANCESTRAL SPECIES 7 ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Euacanthomorphacea ANCESTRAL SPECIES 11 ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Pinecone sodierfish MODERN SPECIES 14 ENSMMDG00005010962 NEK9 (ENSMMDG00005010969) #29 ENSMMDG00005011011 #28 ENSMMDG00005011012 MLH3 (ENSMMDG00005011014) #26 ENSMMDG00005011024 JDP2 (ENSMMDG00005011026) #32 FLVCR2 (ENSMMDG00005011033) #34 ERG28 (ENSMMDG00005011058) #36 ENSMMDG00005011064 tgfb3 (ENSMMDG00005011068) IFT43 (ENSMMDG00005011069) #37 GPATCH2L (ENSMMDG00005011070) ESRRB (ENSMMDG00005011073) prox2 (ENSMMDG00005011116) #21 dlst (ENSMMDG00005011127) #22 RPS6KL1 (ENSMMDG00005011406) #23 ENSMMDG00005011423 ENSMMDG00005011425 LRRC74A (ENSMMDG00005011427) ENSMMDG00005011428 VASH1 (ENSMMDG00005011436) fcf1 (ENSMMDG00005011451) #19 AREL1 (ENSMMDG00005011459) #18 ENSMMDG00005011473 pomt2 (ENSMMDG00005011494) lin52 (ENSMMDG00005011504) #10 VSX2 (ENSMMDG00005011510) #11 SYNDIG1L (ENSMMDG00005011514) #14 RASGRP1 (ENSMMDG00005011516) DLL4 (ENSMMDG00005011519) Percomorphaceae ANCESTRAL SPECIES 13 ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Tiger tail seahorse MODERN SPECIES 491 ENSHCOG00000013862 #26 ENSHCOG00000013914 #26 ENSHCOG00000013934 JDP2 (ENSHCOG00000013941) #32 ENSHCOG00000013945 #34 FLVCR2 (ENSHCOG00000013964) #34 ERG28 (ENSHCOG00000013983) #36 ENSHCOG00000013993 ENSHCOG00000014009 tgfb3 (ENSHCOG00000014030) IFT43 (ENSHCOG00000014060) #37 thoc7 (ENSHCOG00000014078) ENSHCOG00000014085 ESRRB (ENSHCOG00000014101) prox2 (ENSHCOG00000014117) #21 dlst (ENSHCOG00000014121) #22 RPS6KL1 (ENSHCOG00000014148) #23 ENSHCOG00000014149 ENSHCOG00000014166 ENSHCOG00000014170 tonsl (ENSHCOG00000014336) GABRR1 (ENSHCOG00000014356) CNR1 (ENSHCOG00000014365) akirin2 (ENSHCOG00000014385) orc3 (ENSHCOG00000014510) znf292a (ENSHCOG00000014534) cga (ENSHCOG00000014540) syncripl (ENSHCOG00000014547) SNX14 (ENSHCOG00000014595) nt5e (ENSHCOG00000014602) HTR1B (ENSHCOG00000014607) Percomorphaceae_B ANCESTRAL SPECIES 11 ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Ovalentaria ANCESTRAL SPECIES 10 ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Atherinomorphae ANCESTRAL SPECIES 11 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Cyprinodontiformes ANCESTRAL SPECIES 23 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000177781 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Aplocheiloidei ANCESTRAL SPECIES 15 ENSGT01030000234575.c.a.a.a.a.b.b.b ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Mangrove rivulus MODERN SPECIES 1 ENSKMAG00000002860 ENSKMAG00000002854 NEK9 (ENSKMAG00000002833) #29 ENSKMAG00000002818 ENSKMAG00000002802 #26 ENSKMAG00000002599 JDP2 (ENSKMAG00000002558) #32 FLVCR2 (ENSKMAG00000002511) #34 ERG28 (ENSKMAG00000002483) #36 ENSKMAG00000002437 tgfb3 (ENSKMAG00000002413) IFT43 (ENSKMAG00000002368) #37 GPATCH2L (ENSKMAG00000002351) ESRRB (ENSKMAG00000002284) prox2 (ENSKMAG00000002267) #21 dlst (ENSKMAG00000002252) #22 RPS6KL1 (ENSKMAG00000002235) #23 ENSKMAG00000002222 ENSKMAG00000002205 ENSKMAG00000002196 LRRC74A (ENSKMAG00000002140) ANGEL1 (ENSKMAG00000002129) VASH1 (ENSKMAG00000002085) fcf1 (ENSKMAG00000002055) #19 AREL1 (ENSKMAG00000001949) #18 ENSKMAG00000001909 pomt2 (ENSKMAG00000001785) lin52 (ENSKMAG00000001747) #10 VSX2 (ENSKMAG00000001713) #11 SYNDIG1L (ENSKMAG00000001700) #14 RASGRP1 (ENSKMAG00000001590) Turquoise killifish MODERN SPECIES 1625 ENSNFUG00015022179 ENSNFUG00015022182 ENSNFUG00015022184 ENSNFUG00015022220 ENSNFUG00015022229 #26 ENSNFUG00015012380 JDP2 (ENSNFUG00015012547) #32 FLVCR2 (ENSNFUG00015012556) #34 ERG28 (ENSNFUG00015012618) #36 ENSNFUG00015012630 TGFB3 (ENSNFUG00015012658) IFT43 (ENSNFUG00015012668) #37 GPATCH2L (ENSNFUG00015012681) ESRRB (ENSNFUG00015012693) prox2 (ENSNFUG00015012731) #21 DLST (ENSNFUG00015012758) #22 RPS6KL1 (ENSNFUG00015012869) #23 HSD17B8 (ENSNFUG00015012901) ENSNFUG00015012991 ANGEL1 (ENSNFUG00015012994) VASH1 (ENSNFUG00015013003) fcf1 (ENSNFUG00015013013) #19 KIAA0317 (ENSNFUG00015013027) #18 ENSNFUG00015013154 lin52 (ENSNFUG00015016654) #10 VSX2 (ENSNFUG00015016673) #11 SYNDIG1L (ENSNFUG00015016681) #14 ENSNFUG00015016686 RASGRP1 (ENSNFUG00015016706) ENSNFUG00015017266 DLL4 (ENSNFUG00015017304) Cyprinodontoidei ANCESTRAL SPECIES 8 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000177781 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Poeciliinae ANCESTRAL SPECIES 8 ENSGT01030000234575.c.a.a.a.a.b.b.b ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Poecilia ANCESTRAL SPECIES 10 ENSGT01030000234575.c.a.a.a.a.b.b.b ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 NAME_6 ANCESTRAL SPECIES 6 ENSGT01030000234575.c.a.a.a.a.b.b.b ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Amazon molly MODERN SPECIES 282 ENSPFOG00000015203 ENSPFOG00000024162 NEK9 (ENSPFOG00000015097) #29 ENSPFOG00000015092 ENSPFOG00000015041 #26 ENSPFOG00000015030 JDP2 (ENSPFOG00000015014) #32 FLVCR2 (ENSPFOG00000014890) #34 ERG28 (ENSPFOG00000014865) #36 ENSPFOG00000014806 tgfb3 (ENSPFOG00000014756) IFT43 (ENSPFOG00000014703) #37 GPATCH2L (ENSPFOG00000014687) ESRRB (ENSPFOG00000014654) prox2 (ENSPFOG00000014635) #21 dlst (ENSPFOG00000014514) #22 RPS6KL1 (ENSPFOG00000014419) #23 ENSPFOG00000014381 ENSPFOG00000014372 LRRC74A (ENSPFOG00000014267) ANGEL1 (ENSPFOG00000014241) VASH1 (ENSPFOG00000014215) fcf1 (ENSPFOG00000014171) #19 AREL1 (ENSPFOG00000014094) #18 ENSPFOG00000013992 pomt2 (ENSPFOG00000013840) lin52 (ENSPFOG00000013824) #10 VSX2 (ENSPFOG00000013794) #11 SYNDIG1L (ENSPFOG00000013763) #14 RASGRP1 (ENSPFOG00000013684) ENSPFOG00000013673 Sailfin molly MODERN SPECIES 43 ESRRB (ENSPLAG00000013431) prox2 (ENSPLAG00000013452) #21 dlst (ENSPLAG00000013512) #22 RPS6KL1 (ENSPLAG00000013549) #23 ENSPLAG00000013565 ENSPLAG00000000518 LRRC74A (ENSPLAG00000013607) ANGEL1 (ENSPLAG00000013616) VASH1 (ENSPLAG00000013640) fcf1 (ENSPLAG00000013654) #19 AREL1 (ENSPLAG00000013735) #18 ENSPLAG00000000328 pomt2 (ENSPLAG00000014176) lin52 (ENSPLAG00000014183) #10 VSX2 (ENSPLAG00000014209) #11 SYNDIG1L (ENSPLAG00000014219) #14 RASGRP1 (ENSPLAG00000014253) ENSPLAG00000014262 Guppy MODERN SPECIES 453 ENSPREG00000009739 ENSPREG00000009670 ENSPREG00000009658 NEK9 (ENSPREG00000009628) #29 ENSPREG00000009615 ENSPREG00000009604 #26 ENSPREG00000009598 FLVCR2 (ENSPREG00000009584) #34 ERG28 (ENSPREG00000009563) #36 ENSPREG00000009465 tgfb3 (ENSPREG00000009401) IFT43 (ENSPREG00000009385) #37 GPATCH2L (ENSPREG00000009374) ESRRB (ENSPREG00000009351) prox2 (ENSPREG00000009326) #21 dlst (ENSPREG00000009199) #22 RPS6KL1 (ENSPREG00000009143) #23 ENSPREG00000009124 ENSPREG00000009113 ENSPREG00000009102 NRDE2 (ENSPREG00000009066) ttc7b (ENSPREG00000008996) fam177a1 (ENSPREG00000008967) ppp2r3c (ENSPREG00000008934) PRORP (ENSPREG00000008883) psma6a (ENSPREG00000008255) nfkbiab (ENSPREG00000008196) RALGAPA1 (ENSPREG00000007850) ENSPREG00000007776 ENSPREG00000007734 ENSPREG00000007711 Platyfish MODERN SPECIES 10 ENSXMAG00000028329 ENSXMAG00000014872 NEK9 (ENSXMAG00000014847) #29 ENSXMAG00000028286 ENSXMAG00000014821 #26 ENSXMAG00000021870 JDP2 (ENSXMAG00000014805) #32 FLVCR2 (ENSXMAG00000026309) #34 ERG28 (ENSXMAG00000014769) #36 ENSXMAG00000014737 tgfb3 (ENSXMAG00000014713) IFT43 (ENSXMAG00000014700) #37 GPATCH2L (ENSXMAG00000029501) ESRRB (ENSXMAG00000014672) prox2 (ENSXMAG00000014663) #21 dlst (ENSXMAG00000014638) #22 RPS6KL1 (ENSXMAG00000014631) #23 ENSXMAG00000014621 ENSXMAG00000014617 LRRC74A (ENSXMAG00000014608) ANGEL1 (ENSXMAG00000014605) VASH1 (ENSXMAG00000027602) fcf1 (ENSXMAG00000014576) #19 AREL1 (ENSXMAG00000014558) #18 ENSXMAG00000014546 pomt2 (ENSXMAG00000014515) lin52 (ENSXMAG00000028873) #10 VSX2 (ENSXMAG00000014488) #11 SYNDIG1L (ENSXMAG00000014483) #14 RASGRP1 (ENSXMAG00000014464) ENSXMAG00000014462 NAME_4 ANCESTRAL SPECIES 18 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000177781 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Mummichog MODERN SPECIES 238 ttc8 (ENSFHEG00000017442) ENSFHEG00000017455 ENSFHEG00000017470 NEK9 (ENSFHEG00000017544) #29 ENSFHEG00000017558 ENSFHEG00000017575 JDP2 (ENSFHEG00000017589) #32 FLVCR2 (ENSFHEG00000017615) #34 ERG28 (ENSFHEG00000017643) #36 ENSFHEG00000017664 tgfb3 (ENSFHEG00000017672) IFT43 (ENSFHEG00000017684) #37 GPATCH2L (ENSFHEG00000017690) ESRRB (ENSFHEG00000017738) prox2 (ENSFHEG00000017751) #21 dlst (ENSFHEG00000017867) #22 RPS6KL1 (ENSFHEG00000017899) #23 LRRC74A (ENSFHEG00000017929) ANGEL1 (ENSFHEG00000017936) VASH1 (ENSFHEG00000017957) fcf1 (ENSFHEG00000017969) #19 AREL1 (ENSFHEG00000018065) #18 ENSFHEG00000018158 pomt2 (ENSFHEG00000018178) lin52 (ENSFHEG00000018202) #10 VSX2 (ENSFHEG00000018218) #11 SYNDIG1L (ENSFHEG00000018221) #14 RASGRP1 (ENSFHEG00000018250) Sheepshead minnow MODERN SPECIES 490 ENSCVAG00000022544 NEK9 (ENSCVAG00000022531) #29 ENSCVAG00000022493 MLH3 (ENSCVAG00000022485) #26 ENSCVAG00000022477 JDP2 (ENSCVAG00000022457) #32 FLVCR2 (ENSCVAG00000022444) #34 ERG28 (ENSCVAG00000022413) #36 ENSCVAG00000022405 ENSCVAG00000022394 tgfb3 (ENSCVAG00000000577) IFT43 (ENSCVAG00000022374) #37 GPATCH2L (ENSCVAG00000022365) ESRRB (ENSCVAG00000022357) prox2 (ENSCVAG00000022322) #21 dlst (ENSCVAG00000022292) #22 RPS6KL1 (ENSCVAG00000022286) #23 ENSCVAG00000022271 ENSCVAG00000022263 ENSCVAG00000022255 ANGEL1 (ENSCVAG00000022214) Oryzias ANCESTRAL SPECIES 3 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 ENSGT00940000157441 ENSGT00390000003855.b.e.a Oryzias_b ANCESTRAL SPECIES 12 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 ENSGT00940000157441 ENSGT00390000003855.b.e.a Javanese ricefish MODERN SPECIES 14 ENSOJAG00000005078 ENSOJAG00000005066 NEK9 (ENSOJAG00000004956) #29 ENSOJAG00000004937 ENSOJAG00000004920 #26 ENSOJAG00000004732 JDP2 (ENSOJAG00000004690) #32 FLVCR2 (ENSOJAG00000004190) #34 ERG28 (ENSOJAG00000004081) #36 ENSOJAG00000003950 tgfb3 (ENSOJAG00000003928) IFT43 (ENSOJAG00000003918) #37 GPATCH2L (ENSOJAG00000003875) ESRRB (ENSOJAG00000003699) prox2 (ENSOJAG00000003608) #21 dlst (ENSOJAG00000003574) #22 RPS6KL1 (ENSOJAG00000022916) #23 LRRC74A (ENSOJAG00000022909) ANGEL1 (ENSOJAG00000022907) VASH1 (ENSOJAG00000022899) fcf1 (ENSOJAG00000022882) #19 AREL1 (ENSOJAG00000022865) #18 ENSOJAG00000022828 pomt2 (ENSOJAG00000022767) lin52 (ENSOJAG00000022746) #10 VSX2 (ENSOJAG00000022737) #11 SYNDIG1L (ENSOJAG00000022733) #14 RASGRP1 (ENSOJAG00000022679) ENSOJAG00000022663 DLL4 (ENSOJAG00000022660) CHAC1 (ENSOJAG00000022656) Indian medaka MODERN SPECIES ENSOMEG00000021145 NEK9 (ENSOMEG00000021129) #29 ENSOMEG00000021096 ENSOMEG00000021076 #26 ENSOMEG00000020995 JDP2 (ENSOMEG00000020954) #32 FLVCR2 (ENSOMEG00000020912) #34 ERG28 (ENSOMEG00000020883) #36 ENSOMEG00000020849 ENSOMEG00000020840 #35 tgfb3 (ENSOMEG00000020809) IFT43 (ENSOMEG00000020751) #37 GPATCH2L (ENSOMEG00000020697) ESRRB (ENSOMEG00000020638) prox2 (ENSOMEG00000020556) #21 dlst (ENSOMEG00000020530) #22 RPS6KL1 (ENSOMEG00000020459) #23 ANGEL1 (ENSOMEG00000020430) LRRC74A (ENSOMEG00000020376) VASH1 (ENSOMEG00000020341) fcf1 (ENSOMEG00000020323) #19 AREL1 (ENSOMEG00000020268) #18 ENSOMEG00000020182 pomt2 (ENSOMEG00000020029) lin52 (ENSOMEG00000019952) #10 VSX2 (ENSOMEG00000019891) #11 SYNDIG1L (ENSOMEG00000019872) #14 RASGRP1 (ENSOMEG00000019846) ENSOMEG00000019812 DLL4 (ENSOMEG00000019789) CHAC1 (ENSOMEG00000019760) Oryzias_a ANCESTRAL SPECIES 11 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.b ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 ENSGT00940000157441 ENSGT00390000003855.b.e.a Chinese medaka MODERN SPECIES 1096 ENSOSIG00000013628 ENSOSIG00000013625 ENSOSIG00000013624 ENSOSIG00000013622 ENSOSIG00000013543 #26 ENSOSIG00000013541 JDP2 (ENSOSIG00000013538) #32 FLVCR2 (ENSOSIG00000013497) #34 ERG28 (ENSOSIG00000013481) #36 ENSOSIG00000013468 tgfb3 (ENSOSIG00000013465) IFT43 (ENSOSIG00000013464) #37 GPATCH2L (ENSOSIG00000013463) ESRRB (ENSOSIG00000013361) prox2 (ENSOSIG00000013356) #21 dlst (ENSOSIG00000012955) #22 RPS6KL1 (ENSOSIG00000012945) #23 LRRC74A (ENSOSIG00000012942) ENSOSIG00000012940 VASH1 (ENSOSIG00000012937) fcf1 (ENSOSIG00000012934) #19 AREL1 (ENSOSIG00000012629) #18 ENSOSIG00000012422 VSX2 (ENSOSIG00000012399) #11 SYNDIG1L (ENSOSIG00000012397) #14 RASGRP1 (ENSOSIG00000010025) ENSOSIG00000009997 DLL4 (ENSOSIG00000009996) CHAC1 (ENSOSIG00000009993) RHOV (ENSOSIG00000009991) ZFYVE1 (ENSOSIG00000009924) Japanese Medaka HdrR MODERN SPECIES 14 ENSORLG00000026672 ENSORLG00000029477 NEK9 (ENSORLG00000016466) #29 ENSORLG00000028769 ENSORLG00000016499 #26 ENSORLG00000016509 JDP2 (ENSORLG00000029498) #32 FLVCR2 (ENSORLG00000016522) #34 ERG28 (ENSORLG00000016527) #36 ENSORLG00000024651 tgfb3 (ENSORLG00000016565) IFT43 (ENSORLG00000016572) #37 GPATCH2L (ENSORLG00000022664) esrrb (ENSORLG00000016581) prox2 (ENSORLG00000016587) #21 dlst (ENSORLG00000016623) #22 RPS6KL1 (ENSORLG00000016629) #23 LRRC74A (ENSORLG00000016633) ENSORLG00000016639 VASH1 (ENSORLG00000016648) fcf1 (ENSORLG00000016654) #19 AREL1 (ENSORLG00000016669) #18 ENSORLG00000016691 pomt2 (ENSORLG00000027928) lin52 (ENSORLG00000028910) #10 vsx2 (ENSORLG00000016694) #11 SYNDIG1L (ENSORLG00000016699) #14 RASGRP1 (ENSORLG00000016723) ENSORLG00000026344 ENSORLG00000016743 ENSORLG00000027227 Ovalentaria_B ANCESTRAL SPECIES 18 ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Cichlidae ANCESTRAL SPECIES 22 ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000177781 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Pseudocrenilabrinae ANCESTRAL SPECIES 8 ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000177781 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000177781 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Haplochromini ANCESTRAL SPECIES 7 ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000177781 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Burton s mouthbrooder MODERN SPECIES 285 ENSHBUG00000018894 ENSHBUG00000018865 NEK9 (ENSHBUG00000018851) #29 ENSHBUG00000018771 MLH3 (ENSHBUG00000018766) #26 ENSHBUG00000018749 JDP2 (ENSHBUG00000018738) #32 FLVCR2 (ENSHBUG00000018722) #34 ERG28 (ENSHBUG00000018687) #36 ENSHBUG00000018667 tgfb3 (ENSHBUG00000018621) IFT43 (ENSHBUG00000018591) #37 GPATCH2L (ENSHBUG00000018530) ESRRB (ENSHBUG00000018505) prox2 (ENSHBUG00000018457) #21 dlst (ENSHBUG00000018444) #22 RPS6KL1 (ENSHBUG00000018411) #23 ENSHBUG00000000936 LRRC74A (ENSHBUG00000018359) ENSHBUG00000018316 VASH1 (ENSHBUG00000018300) fcf1 (ENSHBUG00000018274) #19 AREL1 (ENSHBUG00000018198) #18 ENSHBUG00000018109 pomt2 (ENSHBUG00000018055) VSX2 (ENSHBUG00000001141) #11 SYNDIG1L (ENSHBUG00000017943) #14 RASGRP1 (ENSHBUG00000017933) ENSHBUG00000017880 DLL4 (ENSHBUG00000017868) CHAC1 (ENSHBUG00000017846) Haplochromini_A ANCESTRAL SPECIES 7 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.c.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000177781 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 P. nyererei MODERN SPECIES 418 NEK9 (ENSPNYG00000021405) #29 ENSPNYG00000021426 ENSPNYG00000021432 #26 ENSPNYG00000021445 #26 ENSPNYG00000021461 JDP2 (ENSPNYG00000021474) #32 FLVCR2 (ENSPNYG00000021487) #34 ERG28 (ENSPNYG00000021518) #36 ENSPNYG00000021526 ENSPNYG00000021536 tgfb3 (ENSPNYG00000021547) IFT43 (ENSPNYG00000021561) #37 GPATCH2L (ENSPNYG00000021578) ESRRB (ENSPNYG00000021595) prox2 (ENSPNYG00000021606) #21 dlst (ENSPNYG00000021627) #22 RPS6KL1 (ENSPNYG00000021655) #23 ENSPNYG00000021673 ENSPNYG00000021684 LRRC74A (ENSPNYG00000021737) ENSPNYG00000021751 VASH1 (ENSPNYG00000021780) AREL1 (ENSPNYG00000021830) #18 ENSPNYG00000021871 pomt2 (ENSPNYG00000021894) lin52 (ENSPNYG00000021909) #10 VSX2 (ENSPNYG00000021915) #11 SYNDIG1L (ENSPNYG00000021925) #14 RASGRP1 (ENSPNYG00000021932) DLL4 (ENSPNYG00000021942) CHAC1 (ENSPNYG00000021956) Haplochromini_B ANCESTRAL SPECIES 13 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.c.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000177781 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 11 NEK9 (ENSMZEG00005020817) #29 ENSMZEG00005020826 MLH3 (ENSMZEG00005020828) #26 ENSMZEG00005020833 JDP2 (ENSMZEG00005020836) #32 FLVCR2 (ENSMZEG00005020841) #34 ENSMZEG00005020846 ERG28 (ENSMZEG00005020851) #36 ENSMZEG00005020854 ENSMZEG00005020858 tgfb3 (ENSMZEG00005020864) IFT43 (ENSMZEG00005020870) #37 GPATCH2L (ENSMZEG00005020876) ESRRB (ENSMZEG00005020880) prox2 (ENSMZEG00005020890) #21 dlst (ENSMZEG00005020939) #22 RPS6KL1 (ENSMZEG00005020941) #23 ENSMZEG00005020944 ENSMZEG00005020946 Zebra mbuna MODERN SPECIES 1101 ENSMZEG00005008198 UBR7 (ENSMZEG00005008214) btbd7 (ENSMZEG00005008235) UNC79 (ENSMZEG00005008292) PRIMA1 (ENSMZEG00005008375) asb2b (ENSMZEG00005008387) OTUB2 (ENSMZEG00005008416) DDX24 (ENSMZEG00005008402) ENSMZEG00005008427 atxn3 (ENSMZEG00005008446) UBR1 (ENSMZEG00005008471) ENSMZEG00005008499 TMEM179 (ENSMZEG00005008507) ENSMZEG00005008526 prox2 (ENSMZEG00005008537) #21 dlst (ENSMZEG00005008555) #22 ENSMZEG00005008603 #23 ENSMZEG00005008650 ENSMZEG00005008667 LRRC74A (ENSMZEG00005008679) ENSMZEG00005008711 VASH1 (ENSMZEG00005008728) fcf1 (ENSMZEG00005008754) #19 AREL1 (ENSMZEG00005008787) #18 ENSMZEG00005008862 pomt2 (ENSMZEG00005009066) lin52 (ENSMZEG00005009129) #10 VSX2 (ENSMZEG00005009147) #11 SYNDIG1L (ENSMZEG00005009158) #14 RASGRP1 (ENSMZEG00005009169) ENSMZEG00005009193 Eastern happy MODERN SPECIES 10 ENSACLG00000024344 NEK9 (ENSACLG00000024366) #29 ENSACLG00000024424 MLH3 (ENSACLG00000024432) #26 ENSACLG00000024472 JDP2 (ENSACLG00000024478) #32 FLVCR2 (ENSACLG00000024486) #34 ERG28 (ENSACLG00000024499) #36 ENSACLG00000024531 ENSACLG00000024537 tgfb3 (ENSACLG00000024559) IFT43 (ENSACLG00000024588) #37 GPATCH2L (ENSACLG00000024682) ESRRB (ENSACLG00000024711) prox2 (ENSACLG00000024761) #21 dlst (ENSACLG00000024780) #22 RPS6KL1 (ENSACLG00000024821) #23 ENSACLG00000024844 ENSACLG00000024855 LRRC74A (ENSACLG00000024864) ENSACLG00000024873 VASH1 (ENSACLG00000024881) fcf1 (ENSACLG00000024887) #19 AREL1 (ENSACLG00000024896) #18 ENSACLG00000001019 pomt2 (ENSACLG00000001122) lin52 (ENSACLG00000001244) #10 VSX2 (ENSACLG00000001260) #11 ENSACLG00000001267 SYNDIG1L (ENSACLG00000001275) #14 RASGRP1 (ENSACLG00000001290) Lyretail cichlid MODERN SPECIES 299 ENSNBRG00000004184 MLH3 (ENSNBRG00000004159) #26 ENSNBRG00000004137 JDP2 (ENSNBRG00000004110) #32 ENSNBRG00000004097 #34 FLVCR2 (ENSNBRG00000004058) #34 ERG28 (ENSNBRG00000004037) #36 ENSNBRG00000004022 ENSNBRG00000004002 ENSNBRG00000003977 tgfb3 (ENSNBRG00000003946) IFT43 (ENSNBRG00000003925) #37 GPATCH2L (ENSNBRG00000003911) ESRRB (ENSNBRG00000003887) prox2 (ENSNBRG00000003860) #21 dlst (ENSNBRG00000003806) #22 ENSNBRG00000003784 RPS6KL1 (ENSNBRG00000003742) #23 ENSNBRG00000003725 LRRC74A (ENSNBRG00000003682) ENSNBRG00000003668 VASH1 (ENSNBRG00000003644) fcf1 (ENSNBRG00000003622) #19 AREL1 (ENSNBRG00000003554) #18 ENSNBRG00000003459 pomt2 (ENSNBRG00000003366) lin52 (ENSNBRG00000003345) #10 VSX2 (ENSNBRG00000003320) #11 SYNDIG1L (ENSNBRG00000003300) #14 RASGRP1 (ENSNBRG00000003262) ENSNBRG00000003229 Nile tilapia MODERN SPECIES 10 ENSONIG00000034187 ENSONIG00000033262 NEK9 (ENSONIG00000020182) #29 ENSONIG00000020183 MLH3 (ENSONIG00000020184) #26 ENSONIG00000020185 JDP2 (ENSONIG00000020186) #32 FLVCR2 (ENSONIG00000020187) #34 ERG28 (ENSONIG00000020188) #36 ENSONIG00000020189 tgfb3 (ENSONIG00000020190) IFT43 (ENSONIG00000037253) #37 GPATCH2L (ENSONIG00000020191) ESRRB (ENSONIG00000020192) prox2 (ENSONIG00000020193) #21 dlst (ENSONIG00000020194) #22 RPS6KL1 (ENSONIG00000020195) #23 ENSONIG00000020196 ENSONIG00000020197 ENSONIG00000031391 ENSONIG00000027448 ENSONIG00000039869 ENSONIG00000012018 VASH1 (ENSONIG00000012019) fcf1 (ENSONIG00000012020) #19 AREL1 (ENSONIG00000012024) #18 ENSONIG00000012026 pomt2 (ENSONIG00000012033) lin52 (ENSONIG00000034628) #10 VSX2 (ENSONIG00000012035) #11 SYNDIG1L (ENSONIG00000032174) #14 Midas cichlid MODERN SPECIES 150 NEK9 (ENSACIG00000007963) #29 ENSACIG00000008009 ENSACIG00000008029 #26 ENSACIG00000008052 JDP2 (ENSACIG00000008079) #32 ENSACIG00000008112 #34 FLVCR2 (ENSACIG00000008129) #34 ERG28 (ENSACIG00000008170) #36 ENSACIG00000008186 ENSACIG00000008200 tgfb3 (ENSACIG00000008212) IFT43 (ENSACIG00000008236) #37 GPATCH2L (ENSACIG00000008257) ESRRB (ENSACIG00000008268) prox2 (ENSACIG00000008285) #21 dlst (ENSACIG00000008305) #22 RPS6KL1 (ENSACIG00000008333) #23 LRRC74A (ENSACIG00000008362) ANGEL1 (ENSACIG00000008392) VASH1 (ENSACIG00000008409) fcf1 (ENSACIG00000008461) #19 AREL1 (ENSACIG00000008708) #18 LTBP2 (ENSACIG00000008750) #17 pomt2 (ENSACIG00000008827) lin52 (ENSACIG00000008882) #10 VSX2 (ENSACIG00000008897) #11 SYNDIG1L (ENSACIG00000008914) #14 RASGRP1 (ENSACIG00000008925) ENSACIG00000008996 DLL4 (ENSACIG00000009017) CHAC1 (ENSACIG00000009072) Pomacentridae ANCESTRAL SPECIES 19 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a.h ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 Pomacentridae_A ANCESTRAL SPECIES 19 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a.h ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 Amphiprion ANCESTRAL SPECIES 217 ENSGT00940000155747.g.a.g ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 Orange clownfish MODERN SPECIES 9 dhrs13a.1 (ENSAPEG00000012638) ENSAPEG00000012622 ENSAPEG00000012613 dhrs13a.2 (ENSAPEG00000012591) MDGA2 (ENSAPEG00000012549) ENSAPEG00000012525 ENSAPEG00000012506 slc3a2b (ENSAPEG00000012493) zgc:109986 (ENSAPEG00000012482) BAZ1A (ENSAPEG00000012434) cfl2 (ENSAPEG00000012418) IFT43 (ENSAPEG00000012334) #37 GPATCH2L (ENSAPEG00000012331) ESRRB (ENSAPEG00000012314) prox2 (ENSAPEG00000012200) #21 dlst (ENSAPEG00000012182) #22 RPS6KL1 (ENSAPEG00000012162) #23 OLFM4 (ENSAPEG00000012141) ENSAPEG00000011845 LRRC74A (ENSAPEG00000011761) ENSAPEG00000011734 ENSAPEG00000011693 VASH1 (ENSAPEG00000011666) fcf1 (ENSAPEG00000011644) #19 AREL1 (ENSAPEG00000011561) #18 ENSAPEG00000011435 pomt2 (ENSAPEG00000011391) lin52 (ENSAPEG00000011363) #10 VSX2 (ENSAPEG00000011328) #11 ENSAPEG00000011312 afg1la (ENSAPEG00000011237) Clown anemonefish MODERN SPECIES 1630 ESRRB (ENSAOCG00000003628) prox2 (ENSAOCG00000003662) #21 dlst (ENSAOCG00000000101) #22 RPS6KL1 (ENSAOCG00000003693) #23 ENSAOCG00000003698 ENSAOCG00000003710 LRRC74A (ENSAOCG00000003723) ANGEL1 (ENSAOCG00000003735) VASH1 (ENSAOCG00000003746) fcf1 (ENSAOCG00000003752) #19 AREL1 (ENSAOCG00000003767) #18 ENSAOCG00000003791 pomt2 (ENSAOCG00000003815) lin52 (ENSAOCG00000003827) #10 VSX2 (ENSAOCG00000003832) #11 Spiny chromis MODERN SPECIES 857 ESRRB (ENSAPOG00000000215) prox2 (ENSAPOG00000008201) #21 dlst (ENSAPOG00000008268) #22 RPS6KL1 (ENSAPOG00000008287) #23 ENSAPOG00000008318 ENSAPOG00000008355 TECTA (ENSAPOG00000008433) TBCEL (ENSAPOG00000008464) Bicolor damselfish MODERN SPECIES 244 ENSSPAG00000009588 NEK9 (ENSSPAG00000009560) #29 ENSSPAG00000009542 MLH3 (ENSSPAG00000009525) #26 ENSSPAG00000009516 ENSSPAG00000009505 #32 FLVCR2 (ENSSPAG00000009467) #34 ERG28 (ENSSPAG00000009448) #36 ENSSPAG00000009438 ENSSPAG00000009413 #35 tgfb3 (ENSSPAG00000009377) IFT43 (ENSSPAG00000009354) #37 GPATCH2L (ENSSPAG00000009339) ESRRB (ENSSPAG00000009297) prox2 (ENSSPAG00000009278) #21 dlst (ENSSPAG00000009222) #22 RPS6KL1 (ENSSPAG00000009189) #23 ENSSPAG00000009174 ENSSPAG00000009151 LRRC74A (ENSSPAG00000009128) ENSSPAG00000009116 VASH1 (ENSSPAG00000009098) fcf1 (ENSSPAG00000009082) #19 AREL1 (ENSSPAG00000009033) #18 ENSSPAG00000008972 pomt2 (ENSSPAG00000008910) ENSSPAG00000008900 lin52 (ENSSPAG00000008856) #10 ENSSPAG00000008801 Percomorphaceae_C ANCESTRAL SPECIES 12 ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Percomorphaceae_D ANCESTRAL SPECIES 10 ENSGT00940000156145 #29 ENSGT00970000197206 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Anabantaria ANCESTRAL SPECIES 10 ENSGT00940000156145 #29 ENSGT00970000197206 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Anabantoidei ANCESTRAL SPECIES 9 ENSGT00940000156145 #29 ENSGT00970000197206 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Climbing perch MODERN SPECIES 3 ENSATEG00000026844 ENSATEG00000001325 ACYP1 (ENSATEG00000025454) ENSATEG00000001351 #26 JDP2 (ENSATEG00000001383) #32 ENSATEG00000001397 #34 FLVCR2 (ENSATEG00000001418) #34 ERG28 (ENSATEG00000001439) #36 ENSATEG00000001482 tgfb3 (ENSATEG00000001502) IFT43 (ENSATEG00000001549) #37 tgfb3 (ENSATEG00000006139) GPATCH2L (ENSATEG00000001600) ESRRB (ENSATEG00000001610) prox2 (ENSATEG00000001654) #21 dlst (ENSATEG00000001662) #22 RPS6KL1 (ENSATEG00000001668) #23 ENSATEG00000029867 ENSATEG00000001674 ENSATEG00000001742 LRRC74A (ENSATEG00000001794) ENSATEG00000001862 VASH1 (ENSATEG00000001867) ENSATEG00000001909 #19 ENSATEG00000002276 #18 ENSATEG00000002354 ENSATEG00000002391 ENSATEG00000002481 #10 ENSATEG00000002512 #11 ENSATEG00000002539 #14 ENSATEG00000002558 Siamese fighting fish MODERN SPECIES 12 ENSBSLG00000024646 ENSBSLG00000024629 ENSBSLG00000024625 NEK9 (ENSBSLG00000024595) #29 ENSBSLG00000024567 ENSBSLG00000024442 JDP2 (ENSBSLG00000024411) #32 FLVCR2 (ENSBSLG00000024264) #34 ERG28 (ENSBSLG00000024257) #36 ENSBSLG00000024202 tgfb3 (ENSBSLG00000024183) IFT43 (ENSBSLG00000024176) #37 ENSBSLG00000024171 ESRRB (ENSBSLG00000024105) prox2 (ENSBSLG00000024093) #21 dlst (ENSBSLG00000024073) #22 RPS6KL1 (ENSBSLG00000024065) #23 ENSBSLG00000023997 ENSBSLG00000023985 ENSBSLG00000023983 ENSBSLG00000023906 VASH1 (ENSBSLG00000023880) fcf1 (ENSBSLG00000023848) #19 AREL1 (ENSBSLG00000023509) #18 ENSBSLG00000023213 VSX2 (ENSBSLG00000023198) #11 SYNDIG1L (ENSBSLG00000023193) #14 RASGRP1 (ENSBSLG00000023008) exd1 (ENSBSLG00000022991) ENSBSLG00000022938 ENSBSLG00000022925 Zig-zag eel MODERN SPECIES 14 ENSMAMG00000005739 ENSMAMG00000005772 #29 ACYP1 (ENSMAMG00000025112) ENSMAMG00000005799 #26 ENSMAMG00000005809 JDP2 (ENSMAMG00000005831) #32 FLVCR2 (ENSMAMG00000005852) #34 ENSMAMG00000027957 #34 ERG28 (ENSMAMG00000027458) #36 ENSMAMG00000005926 tgfb3 (ENSMAMG00000005975) IFT43 (ENSMAMG00000005983) #37 GPATCH2L (ENSMAMG00000005997) ESRRB (ENSMAMG00000006014) prox2 (ENSMAMG00000006036) #21 dlst (ENSMAMG00000025145) #22 RPS6KL1 (ENSMAMG00000006095) #23 ENSMAMG00000006115 ENSMAMG00000006200 ENSMAMG00000006205 ENSMAMG00000026118 ENSMAMG00000006257 VASH1 (ENSMAMG00000006273) ENSMAMG00000027976 #19 ENSMAMG00000006325 #18 ENSMAMG00000006387 ENSMAMG00000006414 ENSMAMG00000006480 #10 ENSMAMG00000028234 ENSMAMG00000006491 #11 ENSMAMG00000006513 #14 Carangaria ANCESTRAL SPECIES 10 ENSGT00940000156145 #29 ENSGT00970000197206 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Carangaria_A ANCESTRAL SPECIES 4 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00970000197206 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Seriola ANCESTRAL SPECIES 3 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.j ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Yellowtail amberjack MODERN SPECIES 2965 ENSSLDG00000020985 ENSSLDG00000021010 NEK9 (ENSSLDG00000021020) #29 ENSSLDG00000021055 ENSSLDG00000021066 #26 ENSSLDG00000021099 JDP2 (ENSSLDG00000021117) #32 FLVCR2 (ENSSLDG00000021129) #34 ERG28 (ENSSLDG00000021171) #36 ENSSLDG00000021195 tgfb3 (ENSSLDG00000021239) IFT43 (ENSSLDG00000021252) #37 GPATCH2L (ENSSLDG00000021264) ESRRB (ENSSLDG00000021283) prox2 (ENSSLDG00000021320) #21 dlst (ENSSLDG00000021344) #22 RPS6KL1 (ENSSLDG00000021428) #23 ENSSLDG00000021445 OLFM4 (ENSSLDG00000021454) ENSSLDG00000021462 LRRC74A (ENSSLDG00000021472) ANGEL1 (ENSSLDG00000021499) VASH1 (ENSSLDG00000021514) fcf1 (ENSSLDG00000021535) #19 AREL1 (ENSSLDG00000021559) #18 ENSSLDG00000021598 pomt2 (ENSSLDG00000021674) lin52 (ENSSLDG00000021710) #10 VSX2 (ENSSLDG00000021738) #11 SYNDIG1L (ENSSLDG00000021763) #14 RASGRP1 (ENSSLDG00000021769) Greater amberjack MODERN SPECIES 62 ENSSDUG00000003431 NEK9 (ENSSDUG00000003442) #29 ENSSDUG00000003471 ENSSDUG00000003495 #26 ENSSDUG00000003517 ENSSDUG00000003536 JDP2 (ENSSDUG00000003556) #32 FLVCR2 (ENSSDUG00000003576) #34 ERG28 (ENSSDUG00000003602) #36 ENSSDUG00000003617 tgfb3 (ENSSDUG00000003655) IFT43 (ENSSDUG00000003660) #37 GPATCH2L (ENSSDUG00000003664) ESRRB (ENSSDUG00000003682) prox2 (ENSSDUG00000003704) #21 dlst (ENSSDUG00000003729) #22 RPS6KL1 (ENSSDUG00000003829) #23 ENSSDUG00000003867 OLFM4 (ENSSDUG00000003878) ENSSDUG00000003889 LRRC74A (ENSSDUG00000003905) ENSSDUG00000003931 ENSSDUG00000003948 VASH1 (ENSSDUG00000003966) fcf1 (ENSSDUG00000003987) #19 AREL1 (ENSSDUG00000004018) #18 ENSSDUG00000004081 pomt2 (ENSSDUG00000004165) lin52 (ENSSDUG00000004193) #10 VSX2 (ENSSDUG00000004216) #11 SYNDIG1L (ENSSDUG00000004244) #14 Barramundi perch MODERN SPECIES 110 ENSLCAG00010020076 NEK9 (ENSLCAG00010020050) #29 ENSLCAG00010020031 ENSLCAG00010020028 ENSLCAG00010019998 #26 ENSLCAG00010019980 JDP2 (ENSLCAG00010019974) #32 FLVCR2 (ENSLCAG00010019962) #34 ERG28 (ENSLCAG00010019950) #36 ENSLCAG00010019793 tgfb3 (ENSLCAG00010019758) IFT43 (ENSLCAG00010019754) #37 GPATCH2L (ENSLCAG00010019744) ESRRB (ENSLCAG00010019726) prox2 (ENSLCAG00010019720) #21 dlst (ENSLCAG00010019684) #22 RPS6KL1 (ENSLCAG00010019672) #23 ENSLCAG00010019662 LRRC74A (ENSLCAG00010019651) ENSLCAG00010019644 VASH1 (ENSLCAG00010019636) fcf1 (ENSLCAG00010019630) #19 AREL1 (ENSLCAG00010019609) #18 ENSLCAG00010019600 ENSLCAG00010019591 pomt2 (ENSLCAG00010019551) lin52 (ENSLCAG00010019518) #10 VSX2 (ENSLCAG00010019505) #11 SYNDIG1L (ENSLCAG00010019503) #14 RASGRP1 (ENSLCAG00010019443) exd1 (ENSLCAG00010019426) Pleuronectoidei ANCESTRAL SPECIES 5 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Tongue sole MODERN SPECIES JDP2 (ENSCSEG00000000539) #32 ENSCSEG00000000541 ENSCSEG00000000543 #26 ENSCSEG00000000548 NEK9 (ENSCSEG00000000555) #29 ENSCSEG00000000582 ENSCSEG00000000586 ENSCSEG00000000602 ttc8 (ENSCSEG00000000589) EML5 (ENSCSEG00000000603) tgfb3 (ENSCSEG00000000606) IFT43 (ENSCSEG00000000620) #37 GPATCH2L (ENSCSEG00000000629) ESRRB (ENSCSEG00000000639) prox2 (ENSCSEG00000000653) #21 dlst (ENSCSEG00000000659) #22 RPS6KL1 (ENSCSEG00000000673) #23 OLFM4 (ENSCSEG00000000680) ENSCSEG00000000689 LRRC74A (ENSCSEG00000000695) ANGEL1 (ENSCSEG00000000707) VASH1 (ENSCSEG00000000714) fcf1 (ENSCSEG00000000721) #19 AREL1 (ENSCSEG00000000729) #18 ENSCSEG00000000780 pomt2 (ENSCSEG00000000842) lin52 (ENSCSEG00000000863) #10 VSX2 (ENSCSEG00000000870) #11 SYNDIG1L (ENSCSEG00000000876) #14 RASGRP1 (ENSCSEG00000000883) ENSCSEG00000000904 Turbot MODERN SPECIES 8 ENSSMAG00000026437 ENSSMAG00000004624 #29 ENSSMAG00000025652 ENSSMAG00000004726 #26 ENSSMAG00000004752 JDP2 (ENSSMAG00000004762) #32 ENSSMAG00000032870 #34 FLVCR2 (ENSSMAG00000004773) #34 ERG28 (ENSSMAG00000031469) #36 ENSSMAG00000004813 tgfb3 (ENSSMAG00000004837) IFT43 (ENSSMAG00000004865) #37 GPATCH2L (ENSSMAG00000004907) ESRRB (ENSSMAG00000004937) prox2 (ENSSMAG00000004975) #21 dlst (ENSSMAG00000004993) #22 RPS6KL1 (ENSSMAG00000024937) #23 LRRC74A (ENSSMAG00000005061) ENSSMAG00000005086 VASH1 (ENSSMAG00000005107) ENSSMAG00000005119 #19 ENSSMAG00000005159 #18 ENSSMAG00000005224 ENSSMAG00000005328 ENSSMAG00000021892 #10 ENSSMAG00000005393 #11 ENSSMAG00000005480 ENSSMAG00000005402 #14 ENSSMAG00000005417 ENSSMAG00000005500 ENSSMAG00000005519 Eupercaria ANCESTRAL SPECIES 9 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Tetraodontidae ANCESTRAL SPECIES 3 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.d.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 1 EML5 (ENSTNIG00000017400) ENSTNIG00000000369 ENSTNIG00000017401 NEK9 (ENSTNIG00000017402) #29 ENSTNIG00000017403 ENSTNIG00000017404 #26 ENSTNIG00000017405 JDP2 (ENSTNIG00000017406) #32 FLVCR2 (ENSTNIG00000017407) #34 ERG28 (ENSTNIG00000017408) #36 ENSTNIG00000017409 tgfb3 (ENSTNIG00000017410) IFT43 (ENSTNIG00000017411) #37 GPATCH2L (ENSTNIG00000017412) ESRRB (ENSTNIG00000017413) dlst (ENSTNIG00000017415) #22 prox2 (ENSTNIG00000017414) #21 dlst (ENSTNIG00000017416) #22 RPS6KL1 (ENSTNIG00000017417) #23 ENSTNIG00000017418 ENSTNIG00000017419 ENSTNIG00000017420 LRRC74A (ENSTNIG00000017421) ENSTNIG00000017422 VASH1 (ENSTNIG00000017423) fcf1 (ENSTNIG00000017424) #19 AREL1 (ENSTNIG00000017425) #18 ENSTNIG00000017426 lin52 (ENSTNIG00000017427) #10 VSX2 (ENSTNIG00000017428) #11 SYNDIG1L (ENSTNIG00000017429) #14 Tetraodon MODERN SPECIES 1 ENSTNIG00000017401 NEK9 (ENSTNIG00000017402) #29 ENSTNIG00000017403 ENSTNIG00000017404 #26 ENSTNIG00000017405 JDP2 (ENSTNIG00000017406) #32 FLVCR2 (ENSTNIG00000017407) #34 ERG28 (ENSTNIG00000017408) #36 ENSTNIG00000017409 tgfb3 (ENSTNIG00000017410) IFT43 (ENSTNIG00000017411) #37 GPATCH2L (ENSTNIG00000017412) ESRRB (ENSTNIG00000017413) dlst (ENSTNIG00000017415) #22 prox2 (ENSTNIG00000017414) #21 dlst (ENSTNIG00000017416) #22 RPS6KL1 (ENSTNIG00000017417) #23 ENSTNIG00000017418 ENSTNIG00000017419 ENSTNIG00000017420 LRRC74A (ENSTNIG00000017421) ENSTNIG00000017422 VASH1 (ENSTNIG00000017423) fcf1 (ENSTNIG00000017424) #19 AREL1 (ENSTNIG00000017425) #18 ENSTNIG00000017426 lin52 (ENSTNIG00000017427) #10 VSX2 (ENSTNIG00000017428) #11 SYNDIG1L (ENSTNIG00000017429) #14 RASGRP1 (ENSTNIG00000017430) ENSTNIG00000017431 Fugu MODERN SPECIES 11 ENSTRUG00000026423 NEK9 (ENSTRUG00000018297) #29 ENSTRUG00000025329 ENSTRUG00000018306 #26 TMED10 (ENSTRUG00000018311) #30 ENSTRUG00000018314 JDP2 (ENSTRUG00000029600) #32 FLVCR2 (ENSTRUG00000018328) #34 ERG28 (ENSTRUG00000032681) #36 ENSTRUG00000018337 tgfb3 (ENSTRUG00000023926) IFT43 (ENSTRUG00000018345) #37 GPATCH2L (ENSTRUG00000018346) ESRRB (ENSTRUG00000018347) prox2 (ENSTRUG00000023052) #21 dlst (ENSTRUG00000018357) #22 RPS6KL1 (ENSTRUG00000015530) #23 ENSTRUG00000015523 ENSTRUG00000015518 ENSTRUG00000027139 ENSTRUG00000015492 ENSTRUG00000015473 VASH1 (ENSTRUG00000015461) fcf1 (ENSTRUG00000015443) #19 AREL1 (ENSTRUG00000015404) #18 ENSTRUG00000015358 pomt2 (ENSTRUG00000015326) lin52 (ENSTRUG00000015313) #10 VSX2 (ENSTRUG00000031815) #11 SYNDIG1L (ENSTRUG00000015278) #14 RASGRP1 (ENSTRUG00000015165) Eupecaria_A ANCESTRAL SPECIES 10 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Ballan wrasse MODERN SPECIES 29 ENSLBEG00000000741 NEK9 (ENSLBEG00000000718) #29 ENSLBEG00000000708 ENSLBEG00000000695 #26 ENSLBEG00000000673 JDP2 (ENSLBEG00000000660) #32 ENSLBEG00000000640 #34 FLVCR2 (ENSLBEG00000000549) #34 ERG28 (ENSLBEG00000000516) #36 ENSLBEG00000000473 tgfb3 (ENSLBEG00000000436) IFT43 (ENSLBEG00000000378) #37 GPATCH2L (ENSLBEG00000000361) ESRRB (ENSLBEG00000000330) prox2 (ENSLBEG00000000305) #21 dlst (ENSLBEG00000000267) #22 RPS6KL1 (ENSLBEG00000000250) #23 ENSLBEG00000000245 ENSLBEG00000000199 LRRC74A (ENSLBEG00000000179) ENSLBEG00000000168 VASH1 (ENSLBEG00000000156) fcf1 (ENSLBEG00000000146) #19 AREL1 (ENSLBEG00000000117) #18 ENSLBEG00000000067 pomt2 (ENSLBEG00000000054) lin52 (ENSLBEG00000000051) #10 VSX2 (ENSLBEG00000000042) #11 SYNDIG1L (ENSLBEG00000000039) #14 RASGRP1 (ENSLBEG00000000025) ENSLBEG00000000022 Eupecaria_B ANCESTRAL SPECIES 11 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Perciformes ANCESTRAL SPECIES 12 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000160884 #17 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a.d #14 ENSGT00940000158910 Cottioidei ANCESTRAL SPECIES 8 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000160884 #17 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a.d #14 ENSGT00940000158910 Lumpfish MODERN SPECIES 14 ENSCLMG00005015702 ENSCLMG00005015701 #26 ENSCLMG00005015699 #26 ENSCLMG00005015697 #30 ENSCLMG00005015619 JDP2 (ENSCLMG00005015616) #32 FLVCR2 (ENSCLMG00005015510) #34 ERG28 (ENSCLMG00005015509) #36 ENSCLMG00005015507 ENSCLMG00005015505 #35 tgfb3 (ENSCLMG00005015502) IFT43 (ENSCLMG00005015500) #37 GPATCH2L (ENSCLMG00005015496) ESRRB (ENSCLMG00005015485) prox2 (ENSCLMG00005015484) #21 dlst (ENSCLMG00005015474) #22 RPS6KL1 (ENSCLMG00005015472) #23 ENSCLMG00005015471 ENSCLMG00005015470 LRRC74A (ENSCLMG00005015469) ENSCLMG00005015468 VASH1 (ENSCLMG00005015467) fcf1 (ENSCLMG00005015466) #19 ENSCLMG00005015465 ENSCLMG00005015463 pomt2 (ENSCLMG00005015390) lin52 (ENSCLMG00005015384) #10 VSX2 (ENSCLMG00005015381) #11 SYNDIG1L (ENSCLMG00005015380) #14 RASGRP1 (ENSCLMG00005015377) ENSCLMG00005015376 Stickleback MODERN SPECIES 15 ttc8 (ENSGACG00000007648) ENSGACG00000007642 ENSGACG00000007640 NEK9 (ENSGACG00000007632) #29 ENSGACG00000007623 #26 ENSGACG00000007617 JDP2 (ENSGACG00000007611) #32 FLVCR2 (ENSGACG00000007602) #34 ERG28 (ENSGACG00000007595) #36 ENSGACG00000007580 tgfb3 (ENSGACG00000007553) IFT43 (ENSGACG00000007550) #37 ENSGACG00000007548 ESRRB (ENSGACG00000007542) prox2 (ENSGACG00000007538) #21 dlst (ENSGACG00000007509) #22 RPS6KL1 (ENSGACG00000007502) #23 ENSGACG00000007497 ENSGACG00000007494 ANGEL1 (ENSGACG00000007487) VASH1 (ENSGACG00000007467) marcksl1a (ENSGACG00000007455) bsdc1 (ENSGACG00000007418) olig4 (ENSGACG00000007415) FNDC5 (ENSGACG00000007409) ENSGACG00000007403 ldlrap1b (ENSGACG00000007390) maco1b (ENSGACG00000007385) rhd (ENSGACG00000007369) tmem50a (ENSGACG00000007351) mgst3b (ENSGACG00000007329) Perciformes_a ANCESTRAL SPECIES 10 ENSGT00940000174567 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a.d #14 ENSGT00940000158910 ENSGT00390000003581 Pike perch MODERN SPECIES 5 ENSSLUG00000007803 ENSSLUG00000007796 #26 ENSSLUG00000007777 #26 ENSSLUG00000007754 #30 ENSSLUG00000007737 JDP2 (ENSSLUG00000007731) #32 FLVCR2 (ENSSLUG00000007709) #34 ERG28 (ENSSLUG00000007698) #36 ENSSLUG00000007653 tgfb3 (ENSSLUG00000007633) IFT43 (ENSSLUG00000007621) #37 ENSSLUG00000007616 GPATCH2L (ENSSLUG00000007608) ESRRB (ENSSLUG00000007571) prox2 (ENSSLUG00000007548) #21 dlst (ENSSLUG00000006732) #22 RPS6KL1 (ENSSLUG00000006656) #23 ENSSLUG00000006646 ENSSLUG00000006643 ENSSLUG00000006635 VASH1 (ENSSLUG00000006627) fcf1 (ENSSLUG00000006556) #19 AREL1 (ENSSLUG00000006502) #18 ENSSLUG00000004819 pomt2 (ENSSLUG00000004563) lin52 (ENSSLUG00000004512) #10 VSX2 (ENSSLUG00000004495) #11 SYNDIG1L (ENSSLUG00000004492) #14 RASGRP1 (ENSSLUG00000004480) ENSSLUG00000004438 DLL4 (ENSSLUG00000004389) Channel bull blenny MODERN SPECIES 14 ENSCGOG00000015177 ENSCGOG00000015179 ENSCGOG00000015182 #26 ENSCGOG00000015200 ENSCGOG00000015204 JDP2 (ENSCGOG00000015205) #32 FLVCR2 (ENSCGOG00000015208) #34 ERG28 (ENSCGOG00000015304) #36 ENSCGOG00000015308 tgfb3 (ENSCGOG00000015422) IFT43 (ENSCGOG00000015428) #37 GPATCH2L (ENSCGOG00000015440) ENSCGOG00000015443 ESRRB (ENSCGOG00000015447) prox2 (ENSCGOG00000015475) #21 dlst (ENSCGOG00000015478) #22 RPS6KL1 (ENSCGOG00000015734) #23 OLFM4 (ENSCGOG00000015741) ENSCGOG00000015747 ENSCGOG00000015748 VASH1 (ENSCGOG00000015750) fcf1 (ENSCGOG00000015768) #19 AREL1 (ENSCGOG00000015882) #18 ENSCGOG00000016220 pomt2 (ENSCGOG00000016600) lin52 (ENSCGOG00000016932) #10 VSX2 (ENSCGOG00000016956) #11 SYNDIG1L (ENSCGOG00000016958) #14 RASGRP1 (ENSCGOG00000016972) ENSCGOG00000017195 DLL4 (ENSCGOG00000017196) Eupecaria_C ANCESTRAL SPECIES 8 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000177781 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 Gilthead seabream MODERN SPECIES 7 ENSSAUG00010004744 ENSSAUG00010004741 ENSSAUG00010004735 #26 ENSSAUG00010004732 #30 ENSSAUG00010004727 JDP2 (ENSSAUG00010004723) #32 FLVCR2 (ENSSAUG00010004003) #34 ERG28 (ENSSAUG00010003977) #36 ENSSAUG00010003969 ENSSAUG00010003967 tgfb3 (ENSSAUG00010003964) IFT43 (ENSSAUG00010003957) #37 GPATCH2L (ENSSAUG00010003952) ESRRB (ENSSAUG00010003939) prox2 (ENSSAUG00010003934) #21 dlst (ENSSAUG00010003627) #22 RPS6KL1 (ENSSAUG00010003609) #23 OLFM4 (ENSSAUG00010003603) ENSSAUG00010003597 LRRC74A (ENSSAUG00010003589) ENSSAUG00010003588 VASH1 (ENSSAUG00010003587) cga (ENSSAUG00010003582) znf292a (ENSSAUG00010003577) orc3 (ENSSAUG00010003509) akirin2 (ENSSAUG00010003480) CNR1 (ENSSAUG00010003476) PM20D2 (ENSSAUG00010003462) GABRR1 (ENSSAUG00010003331) tonsl (ENSSAUG00010003245) nkl.4 (ENSSAUG00010003231) Eupercaria_incertae_sedis ANCESTRAL SPECIES 16 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a ENSGT01030000234575.c.a.a.a.a.b.a.a.b ENSGT00940000156145 #29 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.d.b.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a.b ENSGT00940000155454.w.a.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 European seabass MODERN SPECIES 2 ENSDLAG00005026725 ENSDLAG00005009693 ENSDLAG00005009493 #29 ENSDLAG00005009475 ENSDLAG00005009467 #26 ENSDLAG00005009432 JDP2 (ENSDLAG00005031903) #32 FLVCR2 (ENSDLAG00005009385) #34 ERG28 (ENSDLAG00005034440) #36 ENSDLAG00005009162 tgfb3 (ENSDLAG00005028845) IFT43 (ENSDLAG00005009135) #37 GPATCH2L (ENSDLAG00005009129) ESRRB (ENSDLAG00005009106) prox2 (ENSDLAG00005009097) #21 dlst (ENSDLAG00005008982) #22 RPS6KL1 (ENSDLAG00005008969) #23 ENSDLAG00005008961 ENSDLAG00005008957 ENSDLAG00005008949 ENSDLAG00005008936 VASH1 (ENSDLAG00005008902) ANGEL1 (ENSDLAG00005008917) ENSDLAG00005008876 #19 ENSDLAG00005008806 #18 ENSDLAG00005008046 ENSDLAG00005007981 #11 ENSDLAG00005007977 #14 ENSDLAG00005008729 ENSDLAG00005007995 #10 ENSDLAG00005007515 Large yellow croaker MODERN SPECIES 495 ENSLCRG00005017374 ENSLCRG00005017375 NEK9 (ENSLCRG00005017376) #29 ENSLCRG00005017377 MLH3 (ENSLCRG00005017378) #26 ENSLCRG00005017379 JDP2 (ENSLCRG00005017390) #32 FLVCR2 (ENSLCRG00005017394) #34 ERG28 (ENSLCRG00005017404) #36 ENSLCRG00005017425 tgfb3 (ENSLCRG00005017482) IFT43 (ENSLCRG00005017486) #37 GPATCH2L (ENSLCRG00005017489) esrrb (ENSLCRG00005017492) prox2 (ENSLCRG00005017493) #21 dlst (ENSLCRG00005017494) #22 RPS6KL1 (ENSLCRG00005017499) #23 ENSLCRG00005017501 ENSLCRG00005017502 ENSLCRG00005017505 LRRC74A (ENSLCRG00005017506) ANGEL1 (ENSLCRG00005017507) VASH1 (ENSLCRG00005017509) fcf1 (ENSLCRG00005017513) #19 AREL1 (ENSLCRG00005017515) #18 ENSLCRG00005017517 pomt2 (ENSLCRG00005017660) lin52 (ENSLCRG00005017990) #10 VSX2 (ENSLCRG00005017995) #11 SYNDIG1L (ENSLCRG00005017998) #14 RASGRP1 (ENSLCRG00005013562) Cod MODERN SPECIES 18 NEK9 (ENSGMOG00000015498) #29 ENSGMOG00000026286 #28 ENSGMOG00000024862 ENSGMOG00000023194 #26 ENSGMOG00000027603 JDP2 (ENSGMOG00000015382) #32 FLVCR2 (ENSGMOG00000024949) #34 ERG28 (ENSGMOG00000015353) #36 ENSGMOG00000015266 tgfb3 (ENSGMOG00000015251) IFT43 (ENSGMOG00000015229) #37 ENSGMOG00000032252 GPATCH2L (ENSGMOG00000034598) ESRRB (ENSGMOG00000015180) prox2 (ENSGMOG00000015166) #21 dlst (ENSGMOG00000015133) #22 RPS6KL1 (ENSGMOG00000015101) #23 ENSGMOG00000015004 ENSGMOG00000031366 ENSGMOG00000034383 MAX (ENSGMOG00000016301) ENSGMOG00000016277 GPX2 (ENSGMOG00000025855) ENSGMOG00000016143 RGS6 (ENSGMOG00000016115) ENSGMOG00000016092 ENSGMOG00000016063 ENSGMOG00000016055 ENSGMOG00000015956 ENSGMOG00000015920 ENSGMOG00000029336 #14 Protacanthopterygii ANCESTRAL SPECIES 48 ENSGT00940000156816 ENSGT00940000156145 #29 ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B.g #19 ENSGT00940000156723 #18 ENSGT00940000155823.A ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776.c.b #11 ENSGT00950000183147.A.a.g.a #14 ENSGT00940000158910 ENSGT00390000003581 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 21 ENSGT01020000230338.a.b.b.b.d.b ENSGT00990000209870 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00550000074954.o.b #30 ENSGT00940000164930.a.a ENSGT00940000155693.a.b.j #32 ENSGT01030000234625.B.d.c.a.f #34 ENSGT00390000010925.f #36 ENSGT00940000162910.p ENSGT00940000155747.g.a.e ENSGT00390000012060.c.a #37 ENSGT00410000025698.b ENSGT00940000153433.A.f.b ENSGT00940000154790.b.a.b.c #21 ENSGT00930000151014.q.e #22 ENSGT00940000159815.c #23 ENSGT00940000155454.w.b ENSGT00940000159057 ENSGT00390000012703.b.a ENSGT00940000153117.B.g.b #19 ENSGT00940000156723.f #18 ENSGT00940000155823.A.a ENSGT00940000156829 ENSGT00390000008402.h #10 ENSGT00940000157776.c.b.a #11 ENSGT00950000183147.A.a.g.a.b #14 ENSGT00940000158910.h ENSGT00390000003581.e ENSGT00940000157441.d ENSGT00390000003855.b.e.a.a Salmoninae_a ANCESTRAL SPECIES 36 ENSGT01020000230338.a.b.b.b.d.b ENSGT00990000209870 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00550000074954.o.b #30 ENSGT00940000164930.a.a ENSGT00940000155693.a.b.j #32 ENSGT01030000234625.B.d.c.a.f #34 ENSGT00390000010925.f #36 ENSGT00940000162910.p ENSGT00940000155747.g.a.e ENSGT00390000012060.c.a #37 ENSGT00410000025698.b ENSGT00940000153433.A.f.b ENSGT00940000154790.b.a.b.c #21 ENSGT00930000151014.q.e #22 ENSGT00940000159815.c #23 ENSGT00940000155454.w.b ENSGT00940000159057 ENSGT00390000012703.b.a ENSGT00940000153117.B.g.b #19 ENSGT00940000156723.f #18 ENSGT00940000155823.A.a ENSGT00940000156829 ENSGT00390000008402.h #10 ENSGT00940000157776.c.b.a #11 ENSGT00950000183147.A.a.g.a.b #14 ENSGT00940000158910.h ENSGT00390000003581.e ENSGT00940000157441.d ENSGT00390000003855.b.e.a.a Salmo ANCESTRAL SPECIES 11 ENSGT00970000198028 ENSGT00990000209870 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00550000074954.o.b #30 ENSGT00940000164930.a.a ENSGT00940000155693.a.b.j #32 ENSGT01030000234625.B.d.c.a.f #34 ENSGT00390000010925.f #36 ENSGT00940000162910.p ENSGT00940000155747.g.a.e ENSGT00390000012060.c.a #37 ENSGT00410000025698.b ENSGT00940000153433.A.f.b ENSGT00940000154790.b.a.b.c #21 ENSGT00930000151014.q.e #22 ENSGT00940000159815.c #23 ENSGT00940000155454.w.b ENSGT00940000159057 ENSGT00390000012703.b.a ENSGT00940000153117.B.g.b #19 ENSGT00940000156723.f #18 ENSGT00940000155823.A.a ENSGT00940000156829 ENSGT00390000008402.h #10 ENSGT00940000157776.c.b.a #11 ENSGT00950000183147.A.a.g.a.b #14 ENSGT00940000158910.h ENSGT00390000003581.e ENSGT00940000157441.d ENSGT00390000003855.b.e.a.a River trout MODERN SPECIES 17 NEK9 (ENSSTUG00000009309) #29 ENSSTUG00000009343 ENSSTUG00000009354 MLH3 (ENSSTUG00000009363) #26 ENSSTUG00000009410 #30 ENSSTUG00000009451 JDP2 (ENSSTUG00000009656) #32 FLVCR2 (ENSSTUG00000009668) #34 ERG28 (ENSSTUG00000009730) #36 ENSSTUG00000009741 tgfb3 (ENSSTUG00000009751) IFT43 (ENSSTUG00000009766) #37 GPATCH2L (ENSSTUG00000009776) ESRRB (ENSSTUG00000009786) prox2 (ENSSTUG00000009883) #21 dlst (ENSSTUG00000009889) #22 RPS6KL1 (ENSSTUG00000009935) #23 ENSSTUG00000009964 ANGEL1 (ENSSTUG00000009979) VASH1 (ENSSTUG00000010002) fcf1 (ENSSTUG00000010025) #19 AREL1 (ENSSTUG00000010081) #18 ENSSTUG00000010202 pomt2 (ENSSTUG00000013565) lin52 (ENSSTUG00000013701) #10 VSX2 (ENSSTUG00000013716) #11 SYNDIG1L (ENSSTUG00000013721) #14 RASGRP1 (ENSSTUG00000013740) exd1 (ENSSTUG00000013967) DLL4 (ENSSTUG00000013983) CHAC1 (ENSSTUG00000014108) Atlantic salmon MODERN SPECIES 28 ENSSSAG00000002188 ENSSSAG00000056119 ENSSSAG00000117697 ENSSSAG00000056104 #26 ENSSSAG00000056092 #30 ENSSSAG00000056089 JDP2 (ENSSSAG00000056082) #32 FLVCR2 (ENSSSAG00000055391) #34 ERG28 (ENSSSAG00000055364) #36 ENSSSAG00000055351 tgfb3 (ENSSSAG00000055340) ift43 (ENSSSAG00000055332) #37 gpatch2l (ENSSSAG00000055320) ESRRB (ENSSSAG00000060549) prox2 (ENSSSAG00000055279) #21 dlst (ENSSSAG00000055262) #22 RPS6KL1 (ENSSSAG00000055254) #23 ENSSSAG00000055246 ENSSSAG00000055238 ENSSSAG00000081894 ENSSSAG00000055185 #18 ENSSSAG00000049189 pomt2 (ENSSSAG00000048825) ENSSSAG00000048746 #10 ENSSSAG00000048698 #11 ENSSSAG00000084360 #14 ENSSSAG00000045634 ENSSSAG00000103615 ENSSSAG00000044742 ENSSSAG00000092259 ENSSSAG00000116509 Oncorhynchus ANCESTRAL SPECIES 36 ENSGT00970000198028.a ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00550000074954.o.b #30 ENSGT00940000164930.a.a ENSGT00940000155693.a.b.j #32 ENSGT01030000234625.B.d.c.a.f #34 ENSGT00940000162910.p ENSGT01000000219381 ENSGT00940000155747.g.a.e ENSGT00390000012060.c.a #37 ENSGT00410000025698.b ENSGT00940000153433.A.f.b ENSGT00940000154790.b.a.b.c #21 ENSGT00930000151014.q.e #22 ENSGT00940000159815.c #23 ENSGT00940000155454.w.b ENSGT00940000159057 ENSGT00390000012703.b.a ENSGT00940000153117.B.g.b #19 ENSGT00940000156723.f #18 ENSGT00940000155823.A.a ENSGT00940000156829 ENSGT00390000008402.h #10 ENSGT00940000157776.c.b.a #11 ENSGT00950000183147.A.a.g.a.b #14 ENSGT00940000158910.h ENSGT00390000003581.e ENSGT00940000157441.d ENSGT00390000003855.b.e.a.a Oncorhynchus_a ANCESTRAL SPECIES 33 ENSGT01020000230338.a.b.b.b.d.b ENSGT00970000198028.a ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00800000124176 #26 ENSGT00550000074954.o.b #30 ENSGT00940000164930.a.a ENSGT00940000155693.a.b.j #32 ENSGT01030000234625.B.d.c.a.f #34 ENSGT01000000219381 ENSGT00940000155747.g.a.e ENSGT00390000012060.c.a #37 ENSGT00410000025698.b ENSGT00940000153433.A.f.b ENSGT00940000154790.b.a.b.c #21 ENSGT00930000151014.q.e #22 ENSGT00940000159815.c #23 ENSGT00940000155454.w.b ENSGT00940000159057 ENSGT00390000012703.b.a ENSGT00940000153117.B.g.b #19 ENSGT00940000156723.f #18 ENSGT00940000155823.A.a ENSGT00940000156829 ENSGT00390000008402.h #10 ENSGT00940000157776.c.b.a #11 ENSGT00950000183147.A.a.g.a.b #14 ENSGT00940000158910.h ENSGT00390000003581.e ENSGT00940000157441.d ENSGT00390000003855.b.e.a.a Chinook salmon MODERN SPECIES 32 ENSOTSG00005002345 ENSOTSG00005002340 #28 ENSOTSG00005002338 MLH3 (ENSOTSG00005002258) #26 TMED10 (ENSOTSG00005002120) #30 ENSOTSG00005002118 JDP2 (ENSOTSG00005002116) #32 FLVCR2 (ENSOTSG00005002113) #34 ENSOTSG00005002110 tgfb3 (ENSOTSG00005002108) IFT43 (ENSOTSG00005002104) #37 ENSOTSG00005002098 GPATCH2L (ENSOTSG00005002096) ESRRB (ENSOTSG00005001745) prox2 (ENSOTSG00005001730) #21 dlst (ENSOTSG00005001317) #22 RPS6KL1 (ENSOTSG00005001308) #23 ENSOTSG00005001307 ANGEL1 (ENSOTSG00005001303) VASH1 (ENSOTSG00005001294) fcf1 (ENSOTSG00005001289) #19 AREL1 (ENSOTSG00005001268) #18 ENSOTSG00005010108 pomt2 (ENSOTSG00005010077) lin52 (ENSOTSG00005010074) #10 VSX2 (ENSOTSG00005010071) #11 SYNDIG1L (ENSOTSG00005010068) #14 RASGRP1 (ENSOTSG00005010045) ENSOTSG00005010043 DLL4 (ENSOTSG00005009905) CHAC1 (ENSOTSG00005009850) Coho salmon MODERN SPECIES 5 ENSOKIG00005009457 ENSOKIG00005009471 ENSOKIG00005009478 #28 ENSOKIG00005009487 MLH3 (ENSOKIG00005009504) #26 TMED10 (ENSOKIG00005009588) #30 ENSOKIG00005009625 JDP2 (ENSOKIG00005009628) #32 FLVCR2 (ENSOKIG00005009643) #34 ENSOKIG00005009674 tgfb3 (ENSOKIG00005009688) IFT43 (ENSOKIG00005009701) #37 GPATCH2L (ENSOKIG00005009723) ESRRB (ENSOKIG00005009753) prox2 (ENSOKIG00005009976) #21 dlst (ENSOKIG00005009991) #22 RPS6KL1 (ENSOKIG00005010037) #23 ENSOKIG00005010052 ENSOKIG00005010072 ANGEL1 (ENSOKIG00005010087) VASH1 (ENSOKIG00005010102) ENSOKIG00005010133 #19 AREL1 (ENSOKIG00005010177) #18 ENSOKIG00005010361 pomt2 (ENSOKIG00005011942) lin52 (ENSOKIG00005012180) #10 VSX2 (ENSOKIG00005012192) #11 SYNDIG1L (ENSOKIG00005012201) #14 RASGRP1 (ENSOKIG00005012279) exd1 (ENSOKIG00005013115) DLL4 (ENSOKIG00005013140) Rainbow trout MODERN SPECIES 17 ENSOMYG00000036569 #28 ENSOMYG00000051866 ENSOMYG00000036407 #26 tmeda (ENSOMYG00000036499) #30 ENSOMYG00000068853 JDP2 (ENSOMYG00000036373) #32 FLVCR2 (ENSOMYG00000035816) #34 ENSOMYG00000035729 ENSOMYG00000073372 ENSOMYG00000054625 tgfb3 (ENSOMYG00000035710) IFT43 (ENSOMYG00000035697) #37 GPATCH2L (ENSOMYG00000035677) ESRRB (ENSOMYG00000035608) prox2 (ENSOMYG00000035591) #21 dlst (ENSOMYG00000035571) #22 RPS6KL1 (ENSOMYG00000035555) #23 ENSOMYG00000035544 ENSOMYG00000035536 ENSOMYG00000035518 ENSOMYG00000066138 #19 ENSOMYG00000035396 #18 ENSOMYG00000035327 ENSOMYG00000035240 ENSOMYG00000035195 #10 ENSOMYG00000035185 #11 ENSOMYG00000035178 #14 ENSOMYG00000069315 ENSOMYG00000034693 ENSOMYG00000034613 ENSOMYG00000034593 Huchen MODERN SPECIES 532 ESRRB (ENSHHUG00000042794) prox2 (ENSHHUG00000042804) #21 dlst (ENSHHUG00000042810) #22 ENSHHUG00000042823 #23 ENSHHUG00000042828 #23 ENSHHUG00000042849 ANGEL1 (ENSHHUG00000042861) VASH1 (ENSHHUG00000042867) fcf1 (ENSHHUG00000042876) #19 AREL1 (ENSHHUG00000043006) #18 ENSHHUG00000043020 pomt2 (ENSHHUG00000043151) lin52 (ENSHHUG00000043181) #10 VSX2 (ENSHHUG00000043286) #11 SYNDIG1L (ENSHHUG00000043319) #14 RASGRP1 (ENSHHUG00000043331) exd1 (ENSHHUG00000043550) DLL4 (ENSHHUG00000043572) Salmoninae ANCESTRAL SPECIES 224 ENSGT00390000006223 #15 ENSGT00390000005700.o.b #16 ENSGT00940000156613.f ENSGT00940000156816.b ENSGT00940000156145 #29 ENSGT00550000074954.o.a #30 ENSGT00940000164930.a.b ENSGT00940000155693.a.b.i #32 ENSGT01030000234625.B.d.c.a.e #34 ENSGT00390000010925.e.b #36 ENSGT00940000162910.o ENSGT00940000155747.g.a.f ENSGT00390000012060.c.b #37 ENSGT00940000153433.A.f.a ENSGT00940000154790.b.a.b.d #21 ENSGT00930000151014.q.f #22 ENSGT00940000159815.d #23 ENSGT00940000155454.w.a ENSGT00940000154297.A.g.a Huchen MODERN SPECIES 99 npc2.1 (ENSHHUG00000007139) #15 isca2 (ENSHHUG00000007148) #16 ENSHHUG00000007165 ttc8 (ENSHHUG00000007274) NEK9 (ENSHHUG00000007375) #29 ENSHHUG00000007461 #30 ENSHHUG00000007491 JDP2 (ENSHHUG00000007492) #32 FLVCR2 (ENSHHUG00000007499) #34 ERG28 (ENSHHUG00000007721) #36 ENSHHUG00000007754 tgfb3 (ENSHHUG00000007869) IFT43 (ENSHHUG00000007892) #37 ESRRB (ENSHHUG00000007905) prox2 (ENSHHUG00000007926) #21 dlst (ENSHHUG00000007935) #22 RPS6KL1 (ENSHHUG00000008012) #23 ENSHHUG00000008035 ENSHHUG00000008036 ENSHHUG00000008049 VASH1 (ENSHHUG00000008100) fcf1 (ENSHHUG00000008114) #19 AREL1 (ENSHHUG00000008156) #18 ENSHHUG00000008222 Salmoninae_a ANCESTRAL SPECIES 8 ENSGT00940000156613.f ENSGT00940000156816.b ENSGT00940000156145 #29 ENSGT00550000074954.o.a #30 ENSGT00940000164930.a.b ENSGT00940000155693.a.b.i #32 ENSGT01030000234625.B.d.c.a.e #34 ENSGT00390000010925.e.b #36 ENSGT00940000162910.o ENSGT00940000155747.g.a.f ENSGT00390000012060.c.b #37 ENSGT01000000221503 ENSGT00390000012060.d #37 ENSGT00940000153433.A.f.a ENSGT00940000154790.b.a.b.d #21 ENSGT00930000151014.q.f #22 ENSGT00940000159815.d #23 ENSGT00940000155454.w.a ENSGT00940000154297.A.g.a ENSGT00390000012703.b.b ENSGT00940000153117.B.h #19 ENSGT00940000156723.e #18 ENSGT00940000155823.A.b ENSGT00390000008402.g #10 ENSGT00940000157776.c.b.b #11 ENSGT00950000183147.A.a.g.a.a #14 ENSGT00940000158910.g ENSGT00390000003581.f ENSGT00940000157441.c ENSGT00390000003855.b.e.a.b ENSGT00390000016097.d Salmo ANCESTRAL SPECIES 8 ENSGT00390000005700.o.b #16 ENSGT00940000156613.f ENSGT00940000156816.b ENSGT00940000156145.n #29 ENSGT00550000074954.o.a #30 ENSGT00940000164930.a.b ENSGT00940000155693.a.b.i #32 ENSGT01030000234625.B.d.c.a.e #34 ENSGT00390000010925.e.b #36 ENSGT00940000162910.o ENSGT00940000155747.g.a.f ENSGT00390000012060.c.b #37 ENSGT01000000221503 ENSGT00940000153433.A.f.a ENSGT00940000154790.b.a.b.d #21 ENSGT00930000151014.q.f #22 ENSGT00940000159815.d #23 ENSGT00940000155454.w.a ENSGT00940000154297.A.g.a ENSGT00390000012703.b.b ENSGT00940000153117.B.h #19 ENSGT00940000156723.e #18 ENSGT00940000155823.A.b ENSGT00390000008402.g #10 ENSGT00940000157776.c.b.b #11 ENSGT00950000183147.A.a.g.a.a #14 ENSGT00940000158910.g ENSGT00390000003581.f ENSGT00940000157441.c ENSGT00390000003855.b.e.a.b ENSGT00390000016097.d Atlantic salmon MODERN SPECIES npc2.1 (ENSSSAG00000003002) #15 isca2 (ENSSSAG00000002995) #16 ENSSSAG00000002756 ENSSSAG00000002314 nek9 (ENSSSAG00000002539) #29 TMEDA (ENSSSAG00000002486) #30 ENSSSAG00000002479 ATF3 (ENSSSAG00000002471) #32 ERG28 (ENSSSAG00000002380) #36 FLVCR2 (ENSSSAG00000093159) #34 ENSSSAG00000002308 tgfb3 (ENSSSAG00000114191) ENSSSAG00000002255 #37 ENSSSAG00000002055 prox2 (ENSSSAG00000002013) #21 dlst (ENSSSAG00000001995) #22 RPS6KL1 (ENSSSAG00000001984) #23 ENSSSAG00000090505 ENSSSAG00000001973 ENSSSAG00000001968 ENSSSAG00000001958 #19 ENSSSAG00000001932 #18 ENSSSAG00000001857 ENSSSAG00000001840 #10 ENSSSAG00000001838 #11 ENSSSAG00000001837 #14 ENSSSAG00000001539 ENSSSAG00000001477 ENSSSAG00000113518 ENSSSAG00000001146 ENSSSAG00000001347 River trout MODERN SPECIES 26 isca2 (ENSSTUG00000018672) #16 ENSSTUG00000018749 ttc8 (ENSSTUG00000018837) NEK9 (ENSSTUG00000019098) #29 ENSSTUG00000019237 #30 ENSSTUG00000019297 JDP2 (ENSSTUG00000019305) #32 FLVCR2 (ENSSTUG00000019383) #34 ERG28 (ENSSTUG00000019503) #36 ENSSTUG00000019537 tgfb3 (ENSSTUG00000019687) IFT43 (ENSSTUG00000019705) #37 ENSSTUG00000019725 ESRRB (ENSSTUG00000019769) prox2 (ENSSTUG00000019874) #21 dlst (ENSSTUG00000019931) #22 RPS6KL1 (ENSSTUG00000020299) #23 ENSSTUG00000020314 ENSSTUG00000020330 VASH1 (ENSSTUG00000020359) fcf1 (ENSSTUG00000020416) #19 AREL1 (ENSSTUG00000020519) #18 ENSSTUG00000021430 lin52 (ENSSTUG00000026785) #10 VSX2 (ENSSTUG00000026817) #11 SYNDIG1L (ENSSTUG00000026823) #14 RASGRP1 (ENSSTUG00000026844) ENSSTUG00000027670 DLL4 (ENSSTUG00000027679) CHAC1 (ENSSTUG00000027849) ZFYVE1 (ENSSTUG00000027858) Oncorhynchus ANCESTRAL SPECIES 6 ENSGT00940000156613.f ENSGT00940000156816.b ENSGT00940000156145 #29 ENSGT00550000074954.o.a #30 ENSGT00940000164930.a.b ENSGT00940000155693.a.b.i #32 ENSGT01030000234625.B.d.c.a.e #34 ENSGT00390000010925.f #36 ENSGT00940000162910.o ENSGT00940000155747.g.a.f ENSGT00390000012060.c.b #37 ENSGT01000000221503 ENSGT00390000012060.d #37 ENSGT00940000153433.A.f.a ENSGT00940000154790.b.a.b.d #21 ENSGT00930000151014.q.f #22 ENSGT00940000159815.d #23 ENSGT00940000155454.w.a ENSGT00940000154297.A.g.a ENSGT00390000012703.b.b ENSGT00940000153117.B.h #19 ENSGT00940000156723.e #18 ENSGT00940000155823.A.b ENSGT00390000008402.g #10 ENSGT00940000157776.c.b.b #11 ENSGT00950000183147.A.a.g.a.a #14 ENSGT00940000158910.g ENSGT00940000157441.c ENSGT00390000003855.b.e.a.b ENSGT00390000016097.d ENSGT00940000159153.f.a Oncorhynchus_a ANCESTRAL SPECIES 10 ENSGT00390000006223 #15 ENSGT00390000005700.o.b #16 ENSGT00940000156613.f ENSGT00940000156816.b ENSGT00940000156145 #29 ENSGT00550000074954.o.a #30 ENSGT00940000164930.a.b ENSGT00940000155693.a.b.i #32 ENSGT01030000234625.B.d.c.a.e #34 ENSGT00390000010925.e.b #36 ENSGT00940000162910.o ENSGT00940000155747.g.a.f ENSGT00390000012060.d #37 ENSGT00940000153433.A.f.a ENSGT00940000154790.b.a.b.d #21 ENSGT00930000151014.q.f #22 ENSGT00940000159815.d #23 ENSGT00940000155454.w.a ENSGT00940000154297.A.g.a ENSGT00390000012703.b.b ENSGT00940000153117.B.h #19 ENSGT00940000156723.e #18 ENSGT00940000155823.A.b ENSGT00390000008402.g #10 ENSGT00940000157776.c.b.b #11 ENSGT00950000183147.A.a.g.a.a #14 ENSGT00940000158910.g ENSGT00940000157441.c ENSGT00390000003855.b.e.a.b ENSGT00390000016097.d ENSGT00940000159153.f.a Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 45 isca2 (ENSOTSG00005017023) #16 EML5 (ENSOTSG00005017007) ttc8 (ENSOTSG00005016946) NEK9 (ENSOTSG00005016900) #29 ENSOTSG00005016885 #30 ENSOTSG00005016883 JDP2 (ENSOTSG00005016882) #32 FLVCR2 (ENSOTSG00005016880) #34 ERG28 (ENSOTSG00005016878) #36 ENSOTSG00005015445 tgfb3 (ENSOTSG00005015444) IFT43 (ENSOTSG00005014935) #37 ESRRB (ENSOTSG00005014839) ENSOTSG00005014837 prox2 (ENSOTSG00005014836) #21 dlst (ENSOTSG00005013692) #22 ENSOTSG00005013681 #23 LRRC74A (ENSOTSG00005013675) VASH1 (ENSOTSG00005013673) fcf1 (ENSOTSG00005013670) #19 AREL1 (ENSOTSG00005013545) #18 ENSOTSG00005013538 lin52 (ENSOTSG00005044551) #10 VSX2 (ENSOTSG00005044550) #11 SYNDIG1L (ENSOTSG00005044549) #14 RASGRP1 (ENSOTSG00005044094) DLL4 (ENSOTSG00005044083) CHAC1 (ENSOTSG00005044077) ZFYVE1 (ENSOTSG00005044038) dpf3 (ENSOTSG00005044035) RGS6 (ENSOTSG00005043959) Chinook salmon MODERN SPECIES 2 ENSOTSG00005005368 #15 isca2 (ENSOTSG00005005369) #16 EML5 (ENSOTSG00005005372) ttc8 (ENSOTSG00005005449) NEK9 (ENSOTSG00005005522) #29 ENSOTSG00005005524 #30 ENSOTSG00005005558 JDP2 (ENSOTSG00005005561) #32 FLVCR2 (ENSOTSG00005005562) #34 ERG28 (ENSOTSG00005005563) #36 ENSOTSG00005005579 tgfb3 (ENSOTSG00005006205) IFT43 (ENSOTSG00005006207) #37 ESRRB (ENSOTSG00005006619) prox2 (ENSOTSG00005006726) #21 dlst (ENSOTSG00005006731) #22 RPS6KL1 (ENSOTSG00005007132) #23 ENSOTSG00005007139 VASH1 (ENSOTSG00005007151) fcf1 (ENSOTSG00005007153) #19 AREL1 (ENSOTSG00005007161) #18 ENSOTSG00005007706 lin52 (ENSOTSG00005007713) #10 VSX2 (ENSOTSG00005007715) #11 SYNDIG1L (ENSOTSG00005007718) #14 RASGRP1 (ENSOTSG00005007731) DLL4 (ENSOTSG00005008930) CHAC1 (ENSOTSG00005008965) ZFYVE1 (ENSOTSG00005008967) dpf3 (ENSOTSG00005008973) RGS6 (ENSOTSG00005008976) Coho salmon MODERN SPECIES 27 isca2 (ENSOKIG00005006391) #16 EML5 (ENSOKIG00005006441) TTC8 (ENSOKIG00005006478) NEK9 (ENSOKIG00005006628) #29 ENSOKIG00005007335 #30 ENSOKIG00005007388 JDP2 (ENSOKIG00005007396) #32 FLVCR2 (ENSOKIG00005007415) #34 ERG28 (ENSOKIG00005007555) #36 ENSOKIG00005007642 tgfb3 (ENSOKIG00005008335) IFT43 (ENSOKIG00005008353) #37 ENSOKIG00005008382 ESRRB (ENSOKIG00005008406) prox2 (ENSOKIG00005008492) #21 dlst (ENSOKIG00005008564) #22 RPS6KL1 (ENSOKIG00005009204) #23 ENSOKIG00005009368 VASH1 (ENSOKIG00005009397) fcf1 (ENSOKIG00005009412) #19 AREL1 (ENSOKIG00005009508) #18 ENSOKIG00005010085 LIN52 (ENSOKIG00005013217) #10 VSX2 (ENSOKIG00005013224) #11 SYNDIG1L (ENSOKIG00005013235) #14 RASGRP1 (ENSOKIG00005013272) DLL4 (ENSOKIG00005014126) CHAC1 (ENSOKIG00005014202) ZFYVE1 (ENSOKIG00005014211) DPF3 (ENSOKIG00005014266) RGS6 (ENSOKIG00005014387) Rainbow trout MODERN SPECIES 10 ENSOMYG00000011017 ENSOMYG00000011141 ENSOMYG00000011671 #29 ENSOMYG00000053306 ENSOMYG00000012809 #30 ENSOMYG00000012816 JDP2 (ENSOMYG00000012818) #32 FLVCR2 (ENSOMYG00000012856) #34 ERG28 (ENSOMYG00000012894) #36 ENSOMYG00000012948 tgfb3 (ENSOMYG00000013023) IFT43 (ENSOMYG00000063759) #37 ENSOMYG00000013041 ENSOMYG00000013051 prox2 (ENSOMYG00000013066) #21 dlst (ENSOMYG00000013099) #22 RPS6KL1 (ENSOMYG00000013201) #23 ENSOMYG00000013211 ENSOMYG00000013241 ENSOMYG00000013267 ENSOMYG00000013316 #19 ENSOMYG00000013481 #18 ENSOMYG00000074725 ENSOMYG00000014052 ENSOMYG00000014192 #10 ENSOMYG00000014241 #11 ENSOMYG00000014257 #14 ENSOMYG00000014322 ENSOMYG00000014720 ENSOMYG00000014878 ZFYVE1 (ENSOMYG00000014907) Northern pike MODERN SPECIES 14 ENSELUG00000007416 #28 ENSELUG00000007437 MLH3 (ENSELUG00000007401) #26 tmed10 (ENSELUG00000032761) #30 ENSELUG00000007336 JDP2 (ENSELUG00000007321) #32 FLVCR2 (ENSELUG00000007300) #34 ERG28 (ENSELUG00000007282) #36 ENSELUG00000007250 tgfb3 (ENSELUG00000007196) IFT43 (ENSELUG00000007156) #37 ENSELUG00000030364 GPATCH2L (ENSELUG00000000253) ESRRB (ENSELUG00000007077) prox2 (ENSELUG00000007022) #21 dlst (ENSELUG00000006987) #22 RPS6KL1 (ENSELUG00000006942) #23 LRRC74A (ENSELUG00000006925) ENSELUG00000006883 VASH1 (ENSELUG00000006860) fcf1 (ENSELUG00000006831) #19 AREL1 (ENSELUG00000006769) #18 ENSELUG00000001595 pomt2 (ENSELUG00000006497) lin52 (ENSELUG00000006439) #10 VSX2 (ENSELUG00000006398) #11 SYNDIG1L (ENSELUG00000006373) #14 RASGRP1 (ENSELUG00000006356) ENSELUG00000006324 DLL4 (ENSELUG00000006286) CHAC1 (ENSELUG00000006265) Otomorpha ANCESTRAL SPECIES 294 ENSGT00940000156145 #29 ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.h ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.e ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000160884 #17 Otophysi ANCESTRAL SPECIES 252 ENSGT00940000156145 #29 ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.h ENSGT00940000177781 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.e ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000160884 #17 Characiphysae ANCESTRAL SPECIES 38 ENSGT00390000018386 ENSGT00940000156145 #29 ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000177781 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.e ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000160884 #17 ENSGT00940000155823.A ENSGT00390000013092 ENSGT00940000163656 ENSGT00940000162520.g.f ENSGT00940000161171 ENSGT00950000182995.e.a.a.a Channel catfish MODERN SPECIES 28 Clec4e (ENSIPUG00000007357) ENSIPUG00000007371 ndc80 (ENSIPUG00000007384) nek9 (ENSIPUG00000007451) #29 acyp1 (ENSIPUG00000007512) fos (ENSIPUG00000007522) jdp2 (ENSIPUG00000007544) #32 flvcr2 (ENSIPUG00000007581) #34 ERG28 (ENSIPUG00000007591) #36 ttll5 (ENSIPUG00000007622) tgfb3 (ENSIPUG00000007701) ift43 (ENSIPUG00000007710) #37 gpatch2l (ENSIPUG00000007721) esrrb (ENSIPUG00000007762) prox2 (ENSIPUG00000007832) #21 dlst (ENSIPUG00000007845) #22 rps6kl1 (ENSIPUG00000007905) #23 ENSIPUG00000007940 ENSIPUG00000008106 LRRC74A (ENSIPUG00000008118) angel1 (ENSIPUG00000008142) VASH1 (ENSIPUG00000008160) fcf1 (ENSIPUG00000008200) #19 arel1 (ENSIPUG00000008259) #18 ENSIPUG00000008341 hs1bp3 (ENSIPUG00000008403) RHOB (ENSIPUG00000008426) ENSIPUG00000008447 ENSIPUG00000008462 ENSIPUG00000008477 ENSIPUG00000008489 Characiphysae_b ANCESTRAL SPECIES 39 ENSGT00390000018386 ENSGT00940000156145 #29 ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000177781 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.e ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000160884 #17 ENSGT00940000155823.A ENSGT00390000013092 ENSGT00940000163656 ENSGT00940000162520.g.f ENSGT00940000161171 ENSGT00950000182995.e.a.a.a Electric eel MODERN SPECIES 468 ENSEEEG00000020709 #28 ENSEEEG00000020710 ENSEEEG00000020711 ENSEEEG00000020712 JDP2 (ENSEEEG00000020713) #32 FLVCR2 (ENSEEEG00000020716) #34 ERG28 (ENSEEEG00000020760) #36 ENSEEEG00000020762 ENSEEEG00000020763 tgfb3 (ENSEEEG00000020765) IFT43 (ENSEEEG00000020767) #37 GPATCH2L (ENSEEEG00000020769) esrrb (ENSEEEG00000020776) prox2 (ENSEEEG00000020846) #21 dlst (ENSEEEG00000020867) #22 Characoidei ANCESTRAL SPECIES 41 ENSGT01020000230338.a.b.b.b ENSGT00390000018386 ENSGT00940000156145 #29 ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.e ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000160884 #17 ENSGT00940000155823.A ENSGT00390000013092 ENSGT00950000182945.b.a.a.b.b.b ENSGT00940000162520.h ENSGT00940000162520.g.e ENSGT00940000161171 Mexicana tetra MODERN SPECIES 24 ENSAMXG00000014568 ndc80 (ENSAMXG00000014557) NEK9 (ENSAMXG00000014545) #29 ENSAMXG00000040113 #28 ENSAMXG00000014521 ENSAMXG00000014513 JDP2 (ENSAMXG00000034514) #32 FLVCR2 (ENSAMXG00000014488) #34 ERG28 (ENSAMXG00000014479) #36 ENSAMXG00000014451 tgfb3 (ENSAMXG00000014435) IFT43 (ENSAMXG00000014420) #37 GPATCH2L (ENSAMXG00000014403) esrrb (ENSAMXG00000034832) prox2 (ENSAMXG00000014376) #21 dlst (ENSAMXG00000014365) #22 RPS6KL1 (ENSAMXG00000014346) #23 ENSAMXG00000014329 ENSAMXG00000035002 ENSAMXG00000014315 OLFM4 (ENSAMXG00000038459) LRRC74A (ENSAMXG00000014305) ENSAMXG00000030578 VASH1 (ENSAMXG00000014286) fcf1 (ENSAMXG00000042249) #19 AREL1 (ENSAMXG00000014228) #18 ENSAMXG00000042955 ENSAMXG00000031144 ENSAMXG00000035178 ENSAMXG00000033830 ENSAMXG00000029670 Red-bellied piranha MODERN SPECIES 16 ttc8 (ENSPNAG00000009394) ENSPNAG00000009421 ndc80 (ENSPNAG00000009495) NEK9 (ENSPNAG00000009538) #29 ENSPNAG00000009556 #28 ENSPNAG00000009582 ENSPNAG00000009597 JDP2 (ENSPNAG00000009605) #32 FLVCR2 (ENSPNAG00000009615) #34 ERG28 (ENSPNAG00000009627) #36 ENSPNAG00000009662 tgfb3 (ENSPNAG00000001327) IFT43 (ENSPNAG00000009704) #37 GPATCH2L (ENSPNAG00000009720) esrrb (ENSPNAG00000006181) dlst (ENSPNAG00000009820) #22 ENSPNAG00000001345 #23 prox2 (ENSPNAG00000009888) #21 CCR6 (ENSPNAG00000009905) ENSPNAG00000006678 ENSPNAG00000001354 LRRC74A (ENSPNAG00000001356) ENSPNAG00000010007 VASH1 (ENSPNAG00000010048) fcf1 (ENSPNAG00000010076) #19 AREL1 (ENSPNAG00000010175) #18 LTBP2 (ENSPNAG00000010267) #17 hs1bp3 (ENSPNAG00000010292) RHOB (ENSPNAG00000010304) ENSPNAG00000010359 ENSPNAG00000010377 Cyprinoidei ANCESTRAL SPECIES 176 ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00940000153433.A.e ENSGT00940000154790.b.a.b #21 ENSGT00930000151014.q #22 ENSGT00940000159815 #23 ENSGT00940000155454.w.a ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 422 ENSGT01030000234625.B.d.c.a.a #34 ENSGT00940000155747.g.a.c.b ENSGT00940000153433.A.e.a.a ENSGT00940000154790.b.a.b.e #21 ENSGT00930000151014.q.g.a.a #22 ENSGT00940000159815.a #23 ENSGT00940000155454.w.a ENSGT00390000009313.ib.b.a.e.b.b ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057.i ENSGT00940000156145 #29 ENSGT00420000029820 ENSGT00390000018465 ENSGT00940000155643.c.b.a ENSGT00940000159180.e ENSGT00440000037341.b.a ENSGT00940000158591.g.b.a ENSGT00940000159462.a.a ENSGT00550000074847 Cyprininae_a ANCESTRAL SPECIES 482 ENSGT01030000234625.B.d.c.a.a #34 ENSGT00940000155747.g.a.c.b ENSGT00940000153433.A.e.a.a ENSGT00940000154790.b.a.b.e #21 ENSGT00930000151014.q.g.a.a #22 ENSGT00940000159815.a #23 ENSGT00940000155454.w.a ENSGT00390000009313.ib.b.a.e.b.b ENSGT00940000155454.w.b ENSGT00940000154297.A.g.a ENSGT00940000159057.i ENSGT00940000156145 #29 ENSGT00420000029820 ENSGT00390000018465.n ENSGT00940000155643.c.a ENSGT00940000159180.f Common carp reference MODERN SPECIES 4 ENSCCRG00000028247 ENSCCRG00000073360 FERMT2 (ENSCCRG00000046391) ENSCCRG00000047748 BMP4 (ENSCCRG00000027803) ENSCCRG00000063553 syncripl (ENSCCRG00000045720) ENSCCRG00000039881 ENSCCRG00000057155 ENSCCRG00000080537 ENSCCRG00000058481 #32 ENSCCRG00000050688 #34 tgfb3 (ENSCCRG00000055181) esrrb (ENSCCRG00000004324) prox2 (ENSCCRG00000030011) #21 dlst (ENSCCRG00000030002) #22 RPS6KL1 (ENSCCRG00000058925) #23 ENSCCRG00000018057 ENSCCRG00000059612 ENSCCRG00000046666 ENSCCRG00000046921 ENSCCRG00000074528 ENSCCRG00000046950 ENSCCRG00000046999 #29 dph6 (ENSCCRG00000019593) ENSCCRG00000061174 cdin1 (ENSCCRG00000058229) meis2a (ENSCCRG00000056680) spred1 (ENSCCRG00000053987) fam98b (ENSCCRG00000008964) ENSCCRG00000008243 Goldfish MODERN SPECIES 36 stxbp6 (ENSCARG00000018592) fermt2 (ENSCARG00000018618) DDHD1 (ENSCARG00000018788) ENSCARG00000019798 bmp4 (ENSCARG00000019799) OTOF (ENSCARG00000019825) syncripl (ENSCARG00000020068) ENSCARG00000020266 #28 ENSCARG00000020273 JDP2 (ENSCARG00000020278) #32 ENSCARG00000020286 ENSCARG00000020298 #34 tgfb3 (ENSCARG00000020480) esrrb (ENSCARG00000020490) prox2 (ENSCARG00000020521) #21 dlst (ENSCARG00000020544) #22 RPS6KL1 (ENSCARG00000021487) #23 ENSCARG00000021500 ENSCARG00000021512 ENSCARG00000021522 ENSCARG00000021535 ENSCARG00000021544 NEK9 (ENSCARG00000021552) #29 dph6 (ENSCARG00000021720) ENSCARG00000021755 meis2a (ENSCARG00000021770) ENSCARG00000022269 ENSCARG00000022280 kif6 (ENSCARG00000022342) ENSCARG00000023424 ENSCARG00000023425 Cyprininae ANCESTRAL SPECIES 1333 ENSGT00930000151014.q.g.a.b #22 ENSGT00940000159815.b #23 Cyprininae_a ANCESTRAL SPECIES 1004 ENSGT00930000151014.q.g.a.b #22 ENSGT00940000159815.b #23 Common carp reference MODERN SPECIES 30 ENSCCRG00000037086 ENSCCRG00000075948 syncripl (ENSCCRG00000041944) ENSCCRG00000078494 ENSCCRG00000053187 ENSCCRG00000059288 JDP2 (ENSCCRG00000061353) #32 FLVCR2 (ENSCCRG00000038972) #34 ERG28 (ENSCCRG00000038975) #36 ENSCCRG00000038024 tgfb3 (ENSCCRG00000002876) ENSCCRG00000079793 IFT43 (ENSCCRG00000076096) #37 esrrb (ENSCCRG00000072814) prox2 (ENSCCRG00000081041) #21 dlst (ENSCCRG00000070142) #22 ENSCCRG00000081462 #23 ENSCCRG00000074742 ENSCCRG00000072981 #23 ENSCCRG00000063604 ENSCCRG00000034915 ENSCCRG00000034919 ENSCCRG00000033035 #29 cdin1 (ENSCCRG00000031525) ENSCCRG00000013077 SPRED1 (ENSCCRG00000071349) ENSCCRG00000021397 atxn3 (ENSCCRG00000038498) ENSCCRG00000009693 ENSCCRG00000080022 Goldfish MODERN SPECIES 8 syncripl (ENSCARG00000003079) ENSCARG00000003052 ENSCARG00000003051 ENSCARG00000003046 JDP2 (ENSCARG00000003043) #32 ENSCARG00000003042 FLVCR2 (ENSCARG00000003002) #34 ERG28 (ENSCARG00000002977) #36 ENSCARG00000002968 ENSCARG00000002959 tgfb3 (ENSCARG00000002952) IFT43 (ENSCARG00000002944) #37 ENSCARG00000002940 esrrb (ENSCARG00000002898) prox2 (ENSCARG00000002885) #21 dlst (ENSCARG00000002601) #22 VASH1 (ENSCARG00000002567) ENSCARG00000002558 ENSCARG00000002554 cdin1 (ENSCARG00000002534) meis2a (ENSCARG00000002412) ENSCARG00000002374 ENSCARG00000002183 atxn3 (ENSCARG00000002032) ENSCARG00000060503 asb2b (ENSCARG00000060491) ENSCARG00000060475 ENSCARG00000060471 ENSCARG00000060466 Cyprininae ANCESTRAL SPECIES ENSGT00930000151014.q.g.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00930000151014.q.g.b #22 Golden-line barbel MODERN SPECIES 879 esrrb (ENSSGRG00000027824) prox2 (ENSSGRG00000027825) #21 dlst (ENSSGRG00000027826) #22 RPS6KL1 (ENSSGRG00000027843) #23 ENSSGRG00000027849 ENSSGRG00000027852 ENSSGRG00000027856 ENSSGRG00000027858 Cyprininae ANCESTRAL SPECIES 352 ENSGT00940000159502.d ENSGT00940000155086.A.f ENSGT00940000155086.A.e.a ENSGT00940000153511.b.q.a ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00940000164930.a ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a.b #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a.d ENSGT00390000012060 #37 ENSGT00940000153433.A.e.a.b ENSGT00940000154790.b.a.b.f #21 ENSGT00930000151014.q.h #22 ENSGT00940000159057.j ENSGT00390000012703.b Cyprininae_a ANCESTRAL SPECIES 369 ENSGT00940000153511.b.q.b ENSGT00900000143321 ENSGT00940000155086.A.e.a ENSGT00940000153511.b.q.a ENSGT00940000160947 #28 ENSGT00390000011103.B ENSGT00940000164930.a.d ENSGT00940000155693.a.b #32 ENSGT01030000234625.B.d.c.a.b #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000155747.g.a.d ENSGT00390000012060 #37 ENSGT00940000153433.A.e.a.b ENSGT00940000154790.b.a.b.f #21 ENSGT00930000151014.q.h #22 ENSGT00940000159057.j ENSGT00390000012703.b Golden-line barbel MODERN SPECIES 512 ENSSGRG00000050307 JDP2 (ENSSGRG00000050306) #32 ENSSGRG00000050305 #34 ENSSGRG00000050303 #34 ERG28 (ENSSGRG00000050302) #36 ENSSGRG00000050090 tgfb3 (ENSSGRG00000050079) IFT43 (ENSSGRG00000050078) #37 esrrb (ENSSGRG00000050077) prox2 (ENSSGRG00000050076) #21 dlst (ENSSGRG00000050075) #22 ENSSGRG00000050074 VASH1 (ENSSGRG00000050073) dph6 (ENSSGRG00000049893) cdin1 (ENSSGRG00000049890) meis2a (ENSSGRG00000049862) Zebrafish MODERN SPECIES 8 PXDN (ENSDARG00000098733) zgc:113142 (ENSDARG00000038969) CCR6 (ENSDARG00000038968) ATP6V1C2 (ENSDARG00000070440) nol10 (ENSDARG00000020077) odc1 (ENSDARG00000007377) ENSDARG00000086027 exd2 (ENSDARG00000016117) numb (ENSDARG00000027279) FLVCR2 (ENSDARG00000038957) #34 ERG28 (ENSDARG00000111290) #36 ENSDARG00000036793 tgfb3 (ENSDARG00000019367) esrrb (ENSDARG00000100847) prox2 (ENSDARG00000041952) #21 dlst (ENSDARG00000014230) #22 RPS6KL1 (ENSDARG00000079024) #23 ENSDARG00000041960 ENSDARG00000087625 ENSDARG00000060062 ENSDARG00000077567 fam98b (ENSDARG00000060068) spred1 (ENSDARG00000041449) meis2a (ENSDARG00000098240) cdin1 (ENSDARG00000070461) dph6 (ENSDARG00000042839) VASH1 (ENSDARG00000092716) GABRR1 (ENSDARG00000098081) atxn3 (ENSDARG00000099274) ENSDARG00000036968 DDX24 (ENSDARG00000104708) Clupeocephala ANCESTRAL SPECIES 349 ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000153433.A.e ENSGT00940000155747.g.b ENSGT01030000234625.B.d.c.b #34 ENSGT00940000159745 #33 ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00440000038430 Otomorpha ANCESTRAL SPECIES 433 ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT01030000234625.B.d.c.b #34 ENSGT00940000159745 #33 ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00440000038430 Clupeiformes ANCESTRAL SPECIES 43 ENSGT00940000157120.c ENSGT00940000158275 ENSGT00950000182808.a.a.b.a.c ENSGT00530000064011.c ENSGT00950000183128.C ENSGT00940000157848.a.b ENSGT00940000155944.f.b ENSGT00940000157159.f ENSGT00940000159153 ENSGT00390000016097.d ENSGT00940000157159.e ENSGT00940000164083 ENSGT00390000016097.c ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 Atlantic herring MODERN SPECIES 6 ENSCHAG00000007352 ENSCHAG00000007370 susd6 (ENSCHAG00000007390) srsf5b (ENSCHAG00000007427) SLC10A1 (ENSCHAG00000007465) max (ENSCHAG00000007485) fntb (ENSCHAG00000007564) rab15 (ENSCHAG00000007807) sipa1l1 (ENSCHAG00000007852) rgs6 (ENSCHAG00000008298) dpf3 (ENSCHAG00000009741) wdr21 (ENSCHAG00000009827) ZFYVE1 (ENSCHAG00000010125) YLPM1 (ENSCHAG00000010494) #20 ENSCHAG00000010514 #21 DLST (ENSCHAG00000010561) #22 ENSCHAG00000010740 jdp2b (ENSCHAG00000010789) #32 ENSCHAG00000010831 fosab (ENSCHAG00000010844) #31 tmed10 (ENSCHAG00000010858) #30 eif2b2 (ENSCHAG00000010922) #25 zc3h14 (ENSCHAG00000011031) tmem214 (ENSCHAG00000011278) ENSCHAG00000011627 DNAH8 (ENSCHAG00000011661) bpnt1 (ENSCHAG00000013362) PPP1CB (ENSCHAG00000013454) ENSCHAG00000013683 YPEL5 (ENSCHAG00000013778) ENSCHAG00000013802 Denticle herring MODERN SPECIES 44 ENSDCDG00000011028 ENSDCDG00000011034 ENSDCDG00000011038 ENSDCDG00000011047 wdr21 (ENSDCDG00000011053) ZFYVE1 (ENSDCDG00000011061) DLST (ENSDCDG00000011103) #22 jdp2b (ENSDCDG00000011129) #32 fosab (ENSDCDG00000011149) #31 tmed10 (ENSDCDG00000011195) #30 zc3h14 (ENSDCDG00000011235) Euteleosteomorpha ANCESTRAL SPECIES 131 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00440000038430 ENSGT00940000173326 ENSGT00940000157269.a.a ENSGT00940000158299.a ENSGT00390000013853 ENSGT00940000160284 ENSGT00550000075009 ENSGT00390000017252 ENSGT00950000183212.B Acanthomorphata ANCESTRAL SPECIES 97 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00440000038430 ENSGT00940000173326 ENSGT00940000157269.a.a ENSGT00940000158299.a ENSGT01000000215766 ENSGT00390000013853 ENSGT00940000160284 ENSGT00550000075009 ENSGT00390000017252 Cod MODERN SPECIES 13 ENSGMOG00000013114 atraid (ENSGMOG00000013100) eif2b4 (ENSGMOG00000013084) nme6 (ENSGMOG00000013072) ENSGMOG00000013065 ENSGMOG00000024131 ptk2bb (ENSGMOG00000011174) ENSGMOG00000011202 ENSGMOG00000011154 ENSGMOG00000011150 #33 ENSGMOG00000015362 #34 ENSGMOG00000011125 ENSGMOG00000011117 YLPM1 (ENSGMOG00000011089) #20 ENSGMOG00000011081 #21 DLST (ENSGMOG00000011068) #22 ENSGMOG00000025816 ENSGMOG00000011063 #32 ENSGMOG00000011052 fosab (ENSGMOG00000032190) #31 tmed10 (ENSGMOG00000011041) #30 eif2b2 (ENSGMOG00000011032) #25 ENSGMOG00000010975 #11 ENSGMOG00000010957 #12 ENSGMOG00000010945 ENSGMOG00000010926 ENSGMOG00000010917 ENSGMOG00000010891 ENSGMOG00000010873 ENSGMOG00000010867 ENSGMOG00000010842 Euacanthomorphacea ANCESTRAL SPECIES 13 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Pinecone sodierfish MODERN SPECIES 16 ENSMMDG00005006302 sox7 (ENSMMDG00005024208) ENSMMDG00005024207 ENSMMDG00005024184 FNDC4 (ENSMMDG00005024179) ENSMMDG00005024177 ENSMMDG00005024175 znf513a (ENSMMDG00005024173) snx17 (ENSMMDG00005024135) atraid (ENSMMDG00005024130) eif2b4 (ENSMMDG00005024126) esrrb (ENSMMDG00005024121) YLPM1 (ENSMMDG00005024116) #20 ENSMMDG00005024114 ENSMMDG00005024112 #21 DLST (ENSMMDG00005024090) #22 JDP2 (ENSMMDG00005024081) #32 ENSMMDG00005023972 fosab (ENSMMDG00005023962) #31 tmed10 (ENSMMDG00005023955) #30 eif2b2 (ENSMMDG00005023950) #25 vsx2 (ENSMMDG00005023942) #11 ENSMMDG00005023918 abcd4 (ENSMMDG00005023733) #12 ENSMMDG00005023704 kcnh5a (ENSMMDG00005023702) L3HYPDH (ENSMMDG00005023696) daam1b (ENSMMDG00005023665) ppp1r13bb (ENSMMDG00005023164) ENSMMDG00005023126 ENSMMDG00005023124 Percomorphaceae ANCESTRAL SPECIES 14 ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT01000000215766 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Percomorphaceae_B ANCESTRAL SPECIES 18 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Ovalentaria ANCESTRAL SPECIES 19 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Atherinomorphae ANCESTRAL SPECIES 18 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.b ENSGT00940000155141.w.a Cyprinodontiformes ANCESTRAL SPECIES 14 ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT01030000234625.B.d.d.b.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.b ENSGT00940000155141.w.a Cyprinodontoidei ANCESTRAL SPECIES 12 ENSGT00940000153463.a.c.b ENSGT00940000156452.a.a ENSGT00390000002032 ENSGT00940000156540.b ENSGT00940000158836.a.b ENSGT00950000182955.a.a.b #12 ENSGT00940000165253 ENSGT00940000157776.c.a #11 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT01030000234625.B.d.d.b.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00440000038430 ENSGT00940000173326 ENSGT00940000157269.a.a ENSGT00940000158299.a ENSGT00390000013853 ENSGT00940000160284 ENSGT00550000075009 ENSGT00390000017252 ENSGT00950000183212.B ENSGT00940000158687.a.a Poeciliinae ANCESTRAL SPECIES 15 ENSGT00940000153463.a.c.b ENSGT00940000156452.a.a ENSGT00390000002032 ENSGT00940000156540.b ENSGT00940000158836.a.b ENSGT00950000182955.a.a.b #12 ENSGT00940000165253 ENSGT00940000157776.c.a #11 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT01030000234625.B.d.d.b.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00440000038430 ENSGT00940000173326 ENSGT00940000157269.a.a ENSGT00940000158299.a ENSGT00390000013853 ENSGT00940000160284 ENSGT00550000075009 ENSGT00390000017252 ENSGT00950000183212.B ENSGT00940000158687.a.a Poecilia ANCESTRAL SPECIES 9 ENSGT00510000047616.a.b ENSGT00940000153463.a.c.b ENSGT00940000156452.a.a ENSGT00390000002032 ENSGT00940000156540.b ENSGT00940000158836.a.b ENSGT00950000182955.a.a.b #12 ENSGT00940000165253 ENSGT00940000157776.c.a #11 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837.k #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000155693.a.a.f #32 ENSGT00940000155693.a.a.e #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00440000038430 ENSGT00940000173326 ENSGT00940000157269.a.a ENSGT00940000158299.a ENSGT00390000013853 ENSGT00940000160284 ENSGT00550000075009 ENSGT00390000017252 ENSGT00950000183212.B NAME_6 ANCESTRAL SPECIES 2 ENSGT00510000047616.a.b ENSGT00940000153463.a.c.b ENSGT00940000156452.a.a ENSGT00390000002032 ENSGT00940000156540.b ENSGT00940000158836.a.b ENSGT00950000182955.a.a.b #12 ENSGT00940000165253 ENSGT00940000168254 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837.k #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000155693.a.a.f #32 ENSGT00940000155693.a.a.e #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00440000038430 ENSGT00940000173326 ENSGT00940000157269.a.a ENSGT00940000158299.a ENSGT00390000013853 ENSGT00940000160284 ENSGT00550000075009 ENSGT00390000017252 ENSGT00950000183212.B Sailfin molly MODERN SPECIES 3235 ENSPLAG00000006279 #20 PROX2 (ENSPLAG00000006256) #21 ENSPLAG00000006242 DLST (ENSPLAG00000006230) #22 JDP2 (ENSPLAG00000006195) #32 Amazon molly MODERN SPECIES 304 ENSPFOG00000005680 ppp1r13bb (ENSPFOG00000005703) daam1b (ENSPFOG00000005990) L3HYPDH (ENSPFOG00000006416) kcnh5a (ENSPFOG00000006503) ENSPFOG00000006631 abcd4 (ENSPFOG00000006709) #12 ENSPFOG00000006934 batf (ENSPFOG00000007199) #33 FLVCR2 (ENSPFOG00000007223) #34 TGFB3 (ENSPFOG00000007494) esrrb (ENSPFOG00000007540) YLPM1 (ENSPFOG00000007687) #20 ENSPFOG00000007812 #21 ENSPFOG00000024079 DLST (ENSPFOG00000007814) #22 JDP2 (ENSPFOG00000007886) #32 JDP2 (ENSPFOG00000007903) #32 ENSPFOG00000007924 fosab (ENSPFOG00000008004) #31 tmed10 (ENSPFOG00000008076) #30 eif2b2 (ENSPFOG00000008104) #25 zc3h14 (ENSPFOG00000008213) ENSPFOG00000021890 ptk2bb (ENSPFOG00000008438) CHRNA2 (ENSPFOG00000008992) ENSPFOG00000009092 nme6 (ENSPFOG00000009100) eif2b4 (ENSPFOG00000009151) atraid (ENSPFOG00000009271) snx17 (ENSPFOG00000009280) Guppy MODERN SPECIES 452 daam1b (ENSPREG00000020021) L3HYPDH (ENSPREG00000019977) kcnh5a (ENSPREG00000019954) ENSPREG00000019931 abcd4 (ENSPREG00000019886) #12 ENSPREG00000019814 vsx2 (ENSPREG00000019795) #11 ENSPREG00000019767 batf (ENSPREG00000019749) #33 FLVCR2 (ENSPREG00000019720) #34 ENSPREG00000019682 TGFB3 (ENSPREG00000019674) esrrb (ENSPREG00000019646) YLPM1 (ENSPREG00000019611) #20 ENSPREG00000019593 #21 DLST (ENSPREG00000019575) #22 JDP2 (ENSPREG00000019566) #32 ENSPREG00000019546 fosab (ENSPREG00000019537) #31 tmed10 (ENSPREG00000019502) #30 eif2b2 (ENSPREG00000019462) #25 zc3h14 (ENSPREG00000019413) ptk2bb (ENSPREG00000019336) CHRNA2 (ENSPREG00000019311) ENSPREG00000019302 nme6 (ENSPREG00000019290) eif2b4 (ENSPREG00000019206) atraid (ENSPREG00000019181) snx17 (ENSPREG00000019139) znf513a (ENSPREG00000019118) ENSPREG00000019103 Platyfish MODERN SPECIES 6 ENSXMAG00000003810 ppp1r13bb (ENSXMAG00000003812) daam1b (ENSXMAG00000003836) L3HYPDH (ENSXMAG00000003859) kcnh5a (ENSXMAG00000003864) SGPP1 (ENSXMAG00000022329) abcd4 (ENSXMAG00000003885) #12 ENSXMAG00000029801 vsx2 (ENSXMAG00000024293) #11 batf (ENSXMAG00000025113) #33 FLVCR2 (ENSXMAG00000003955) #34 TGFB3 (ENSXMAG00000003970) esrrb (ENSXMAG00000003978) YLPM1 (ENSXMAG00000003988) #20 ENSXMAG00000004000 #21 DLST (ENSXMAG00000022519) #22 JDP2 (ENSXMAG00000025219) #32 ENSXMAG00000013196 fosab (ENSXMAG00000004017) #31 tmed10 (ENSXMAG00000027668) #30 eif2b2 (ENSXMAG00000004027) #25 zc3h14 (ENSXMAG00000004041) ptk2bb (ENSXMAG00000004048) CHRNA2 (ENSXMAG00000004108) ENSXMAG00000023612 nme6 (ENSXMAG00000004142) eif2b4 (ENSXMAG00000004149) atraid (ENSXMAG00000029577) snx17 (ENSXMAG00000004181) znf513a (ENSXMAG00000022249) ENSXMAG00000004219 NAME_4 ANCESTRAL SPECIES 8 ENSGT00510000047616.a.b ENSGT00940000153463.a.c.b ENSGT00940000156452.a.a ENSGT00390000002032 ENSGT00940000156540.b ENSGT00940000158836.a.b ENSGT00950000182955.a.a.b #12 ENSGT00940000165253 ENSGT00940000157776.c.a #11 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00440000038430 ENSGT00940000173326 ENSGT00940000157269.a.a ENSGT00940000158299.a ENSGT00390000013853 ENSGT00940000160284 ENSGT00550000075009 ENSGT00390000017252 ENSGT00950000183212.B ENSGT00940000158687.a.a Mummichog MODERN SPECIES 2240 ENSFHEG00000001227 ppp1r13bb (ENSFHEG00000001247) daam1b (ENSFHEG00000001262) L3HYPDH (ENSFHEG00000001273) kcnh5a (ENSFHEG00000001276) SGPP1 (ENSFHEG00000001281) abcd4 (ENSFHEG00000001288) #12 ENSFHEG00000001297 vsx2 (ENSFHEG00000001302) #11 batf (ENSFHEG00000001304) #33 FLVCR2 (ENSFHEG00000001312) #34 TGFB3 (ENSFHEG00000001318) esrrb (ENSFHEG00000001330) YLPM1 (ENSFHEG00000001344) #20 ENSFHEG00000001353 #21 DLST (ENSFHEG00000001363) #22 JDP2 (ENSFHEG00000001367) #32 ENSFHEG00000001372 fosab (ENSFHEG00000001375) #31 tmed10 (ENSFHEG00000001378) #30 eif2b2 (ENSFHEG00000001385) #25 ENSFHEG00000001391 ENSFHEG00000001395 Sheepshead minnow MODERN SPECIES 116 ENSCVAG00000000732 ppp1r13bb (ENSCVAG00000022434) daam1b (ENSCVAG00000022472) L3HYPDH (ENSCVAG00000022480) kcnh5a (ENSCVAG00000022520) SGPP1 (ENSCVAG00000022532) abcd4 (ENSCVAG00000022611) #12 ENSCVAG00000022663 vsx2 (ENSCVAG00000022693) #11 batf (ENSCVAG00000022701) #33 FLVCR2 (ENSCVAG00000022708) #34 TGFB3 (ENSCVAG00000022713) esrrb (ENSCVAG00000022733) YLPM1 (ENSCVAG00000022796) #20 ENSCVAG00000022806 #21 DLST (ENSCVAG00000022836) #22 jdp2b (ENSCVAG00000022845) #32 ENSCVAG00000022851 fosab (ENSCVAG00000022858) #31 tmed10 (ENSCVAG00000022868) #30 eif2b2 (ENSCVAG00000022891) #25 zc3h14 (ENSCVAG00000000590) ENSCVAG00000022908 ptk2bb (ENSCVAG00000022965) CHRNA2 (ENSCVAG00000023091) ENSCVAG00000023107 nme6 (ENSCVAG00000023142) eif2b4 (ENSCVAG00000023159) atraid (ENSCVAG00000023183) snx17 (ENSCVAG00000023233) znf513a (ENSCVAG00000023273) Aplocheiloidei ANCESTRAL SPECIES 36 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.b ENSGT00940000155141.w.a Mangrove rivulus MODERN SPECIES 100 znf513a (ENSKMAG00000013183) snx17 (ENSKMAG00000013208) atraid (ENSKMAG00000013258) eif2b4 (ENSKMAG00000013298) nme6 (ENSKMAG00000013397) BAALC (ENSKMAG00000013427) CHRNA2 (ENSKMAG00000013440) ptk2bb (ENSKMAG00000013508) ENSKMAG00000013679 zc3h14 (ENSKMAG00000013693) batf (ENSKMAG00000013768) #33 FLVCR2 (ENSKMAG00000013797) #34 TGFB3 (ENSKMAG00000013827) esrrb (ENSKMAG00000013840) ENSKMAG00000013878 #20 ENSKMAG00000013946 #22 jdp2b (ENSKMAG00000013974) #32 ENSKMAG00000014003 fosab (ENSKMAG00000014021) #31 tmed10 (ENSKMAG00000014045) #30 pomca (ENSKMAG00000014073) eif2b2 (ENSKMAG00000014088) #25 vsx2 (ENSKMAG00000014143) #11 ENSKMAG00000014166 abcd4 (ENSKMAG00000014246) #12 SGPP1 (ENSKMAG00000014303) ENSKMAG00000014316 Ovalentaria_B ANCESTRAL SPECIES 17 ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT01030000234625.B.d.d.b.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Pomacentridae ANCESTRAL SPECIES 34 ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT01030000234625.B.d.d.b.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253.e ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Pomacentridae_A ANCESTRAL SPECIES 33 ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT01030000234625.B.d.d.b.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253.e ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Amphiprion ANCESTRAL SPECIES 51 ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT01030000234625.B.d.d.b.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253.e ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00390000004660.C.a.a.d Clown anemonefish MODERN SPECIES 2346 YLPM1 (ENSAOCG00000019134) #20 PROX2 (ENSAOCG00000019047) #21 DLST (ENSAOCG00000019028) #22 jdp2b (ENSAOCG00000019001) #32 ENSAOCG00000018993 fosab (ENSAOCG00000018970) #31 Orange clownfish MODERN SPECIES 2 snx17 (ENSAPEG00000002283) atraid (ENSAPEG00000002265) eif2b4 (ENSAPEG00000002245) nme6 (ENSAPEG00000002211) ENSAPEG00000002186 CHRNA2 (ENSAPEG00000002072) ptk2bb (ENSAPEG00000001933) ENSAPEG00000001895 zc3h14 (ENSAPEG00000001867) batf (ENSAPEG00000001859) #33 FLVCR2 (ENSAPEG00000001849) #34 TGFB3 (ENSAPEG00000001818) esrrb (ENSAPEG00000001797) YLPM1 (ENSAPEG00000001749) #20 ENSAPEG00000001710 #21 DLST (ENSAPEG00000001698) #22 ENSAPEG00000001634 jdp2b (ENSAPEG00000001618) #32 ENSAPEG00000001432 fosab (ENSAPEG00000001415) #31 tmed10 (ENSAPEG00000001388) #30 eif2b2 (ENSAPEG00000001351) #25 vsx2 (ENSAPEG00000001332) #11 ENSAPEG00000001297 ENSAPEG00000001198 abcd4 (ENSAPEG00000001064) #12 SGPP1 (ENSAPEG00000001044) kcnh5a (ENSAPEG00000001002) L3HYPDH (ENSAPEG00000000958) daam1b (ENSAPEG00000000913) ppp1r13bb (ENSAPEG00000000846) Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 3921 ENSAPOG00000011801 #22 Spiny chromis MODERN SPECIES 239 CHRNA2 (ENSAPOG00000001602) ptk2bb (ENSAPOG00000001621) ENSAPOG00000001631 zc3h14 (ENSAPOG00000001640) batf (ENSAPOG00000001651) #33 FLVCR2 (ENSAPOG00000001671) #34 TGFB3 (ENSAPOG00000001689) esrrb (ENSAPOG00000001700) YLPM1 (ENSAPOG00000001746) #20 ENSAPOG00000001782 #21 DLST (ENSAPOG00000001796) #22 jdp2b (ENSAPOG00000001814) #32 Bicolor damselfish MODERN SPECIES 1989 ENSSPAG00000021262 #21 ENSSPAG00000021238 #22 jdp2b (ENSSPAG00000021229) #32 ENSSPAG00000021144 fosab (ENSSPAG00000021128) #31 tmed10 (ENSSPAG00000021113) #30 eif2b2 (ENSSPAG00000021096) #25 vsx2 (ENSSPAG00000021079) #11 ENSSPAG00000021070 Cichlidae ANCESTRAL SPECIES 12 ENSGT00940000158687.a.a ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.d.b.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 6 ENSGT00940000158687.a.a ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Nile tilapia MODERN SPECIES 6 snx17 (ENSONIG00000015317) atraid (ENSONIG00000015316) eif2b4 (ENSONIG00000015313) ENSONIG00000039243 nme6 (ENSONIG00000027332) CHRNA2 (ENSONIG00000015309) ptk2bb (ENSONIG00000015297) zc3h14 (ENSONIG00000015292) batf (ENSONIG00000039750) #33 ENSONIG00000027931 #34 ENSONIG00000015287 #34 TGFB3 (ENSONIG00000015284) esrrb (ENSONIG00000015282) YLPM1 (ENSONIG00000015280) #20 ENSONIG00000038853 #21 DLST (ENSONIG00000015272) #22 ENSONIG00000015269 jdp2b (ENSONIG00000015268) #32 ENSONIG00000015266 fosab (ENSONIG00000036571) #31 tmed10 (ENSONIG00000015257) #30 eif2b2 (ENSONIG00000015252) #25 vsx2 (ENSONIG00000013597) #11 ENSONIG00000013592 abcd4 (ENSONIG00000013589) #12 SGPP1 (ENSONIG00000030916) KCNH5 (ENSONIG00000013580) L3HYPDH (ENSONIG00000013579) daam1b (ENSONIG00000013573) ppp1r13bb (ENSONIG00000013567) ENSONIG00000013564 Pseudocrenilabrinae_A ANCESTRAL SPECIES 3 ENSGT00940000158687.a.a ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Haplochromini ANCESTRAL SPECIES 13 ENSGT00940000158687.a.a ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Burton s mouthbrooder MODERN SPECIES 276 znf513a (ENSHBUG00000012802) snx17 (ENSHBUG00000012794) atraid (ENSHBUG00000012717) eif2b4 (ENSHBUG00000012690) nme6 (ENSHBUG00000012626) ENSHBUG00000012585 CHRNA2 (ENSHBUG00000012577) ptk2bb (ENSHBUG00000012561) zc3h14 (ENSHBUG00000012522) batf (ENSHBUG00000012500) #33 ENSHBUG00000012486 #34 TGFB3 (ENSHBUG00000012406) esrrb (ENSHBUG00000012379) YLPM1 (ENSHBUG00000012325) #20 ENSHBUG00000012272 #21 DLST (ENSHBUG00000012267) #22 ENSHBUG00000012234 jdp2b (ENSHBUG00000012218) #32 ENSHBUG00000012204 fosab (ENSHBUG00000012155) #31 tmed10 (ENSHBUG00000012126) #30 eif2b2 (ENSHBUG00000012113) #25 vsx2 (ENSHBUG00000012075) #11 ENSHBUG00000012052 abcd4 (ENSHBUG00000011978) #12 ENSHBUG00000011846 kcnh5a (ENSHBUG00000011838) L3HYPDH (ENSHBUG00000011810) daam1b (ENSHBUG00000011796) ppp1r13bb (ENSHBUG00000011733) ENSHBUG00000011631 Haplochromini_A ANCESTRAL SPECIES 11 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.d.b.a #34 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Haplochromini_B ANCESTRAL SPECIES 22 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.d.b.a #34 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Eastern happy MODERN SPECIES 6 snx17 (ENSACLG00000012039) atraid (ENSACLG00000012105) eif2b4 (ENSACLG00000012164) nme6 (ENSACLG00000012254) ENSACLG00000012294 CHRNA2 (ENSACLG00000012300) ptk2bb (ENSACLG00000012333) zc3h14 (ENSACLG00000012665) batf (ENSACLG00000012725) #33 ENSACLG00000012746 #34 FLVCR2 (ENSACLG00000012759) #34 TGFB3 (ENSACLG00000012784) esrrb (ENSACLG00000012797) YLPM1 (ENSACLG00000013109) #20 ENSACLG00000013177 #21 DLST (ENSACLG00000013180) #22 ENSACLG00000013199 jdp2b (ENSACLG00000013258) #32 ENSACLG00000013262 fosab (ENSACLG00000013269) #31 ENSACLG00000013275 tmed10 (ENSACLG00000013280) #30 eif2b2 (ENSACLG00000013294) #25 vsx2 (ENSACLG00000013323) #11 ENSACLG00000013330 abcd4 (ENSACLG00000013349) #12 SGPP1 (ENSACLG00000013382) ENSACLG00000013387 L3HYPDH (ENSACLG00000013408) daam1b (ENSACLG00000013675) ppp1r13bb (ENSACLG00000013884) Zebra mbuna MODERN SPECIES 1097 ENSMZEG00005016232 ENSMZEG00005016236 ENSMZEG00005016248 rps12 (ENSMZEG00005016253) eya4 (ENSMZEG00005016269) tcf21 (ENSMZEG00005016294) zc3h14 (ENSMZEG00005016319) batf (ENSMZEG00005016329) #33 ENSMZEG00005016331 #34 FLVCR2 (ENSMZEG00005016338) #34 TGFB3 (ENSMZEG00005016356) ENSMZEG00005016362 esrrb (ENSMZEG00005016372) YLPM1 (ENSMZEG00005016383) #20 ENSMZEG00005016401 #21 DLST (ENSMZEG00005016409) #22 ENSMZEG00005016419 jdp2b (ENSMZEG00005016423) #32 ENSMZEG00005016427 fosab (ENSMZEG00005016439) #31 tmed10 (ENSMZEG00005016445) #30 eif2b2 (ENSMZEG00005016450) #25 vsx2 (ENSMZEG00005016530) #11 ENSMZEG00005016539 abcd4 (ENSMZEG00005016566) #12 ENSMZEG00005016583 ENSMZEG00005016585 L3HYPDH (ENSMZEG00005016595) daam1b (ENSMZEG00005016609) ppp1r13bb (ENSMZEG00005016646) ENSMZEG00005016655 P. nyererei MODERN SPECIES 353 snx17 (ENSPNYG00000007104) atraid (ENSPNYG00000007149) eif2b4 (ENSPNYG00000007166) nme6 (ENSPNYG00000007283) ENSPNYG00000007364 CHRNA2 (ENSPNYG00000007392) ptk2bb (ENSPNYG00000007492) zc3h14 (ENSPNYG00000007634) batf (ENSPNYG00000007662) #33 FLVCR2 (ENSPNYG00000007684) #34 ENSPNYG00000007714 #34 TGFB3 (ENSPNYG00000007736) esrrb (ENSPNYG00000007760) YLPM1 (ENSPNYG00000007791) #20 ENSPNYG00000007842 #21 DLST (ENSPNYG00000007848) #22 jdp2b (ENSPNYG00000007866) #32 ENSPNYG00000007896 fosab (ENSPNYG00000008073) #31 tmed10 (ENSPNYG00000008096) #30 eif2b2 (ENSPNYG00000008123) #25 vsx2 (ENSPNYG00000008171) #11 ENSPNYG00000008264 abcd4 (ENSPNYG00000008312) #12 SGPP1 (ENSPNYG00000008350) kcnh5a (ENSPNYG00000008374) L3HYPDH (ENSPNYG00000008417) daam1b (ENSPNYG00000008482) ppp1r13bb (ENSPNYG00000008590) cfap45 (ENSPNYG00000008667) ENSPNYG00000008699 Lyretail cichlid MODERN SPECIES 338 atraid (ENSNBRG00000019469) eif2b4 (ENSNBRG00000019417) nme6 (ENSNBRG00000019387) ENSNBRG00000019368 CHRNA2 (ENSNBRG00000019298) ptk2bb (ENSNBRG00000019226) zc3h14 (ENSNBRG00000019192) batf (ENSNBRG00000019169) #33 ENSNBRG00000019153 #34 FLVCR2 (ENSNBRG00000019135) #34 ENSNBRG00000019123 esrrb (ENSNBRG00000019101) YLPM1 (ENSNBRG00000019064) #20 ENSNBRG00000019044 #21 ENSNBRG00000019031 DLST (ENSNBRG00000019002) #22 jdp2b (ENSNBRG00000018983) #32 ENSNBRG00000018888 fosab (ENSNBRG00000018852) #31 tmed10 (ENSNBRG00000018828) #30 eif2b2 (ENSNBRG00000018798) #25 vsx2 (ENSNBRG00000018743) #11 ENSNBRG00000018707 abcd4 (ENSNBRG00000018653) #12 SGPP1 (ENSNBRG00000018629) ENSNBRG00000018603 L3HYPDH (ENSNBRG00000018569) daam1b (ENSNBRG00000018527) ppp1r13bb (ENSNBRG00000018494) ENSNBRG00000018451 cfap45 (ENSNBRG00000018424) Midas cichlid MODERN SPECIES 271 znf513a (ENSACIG00000003381) snx17 (ENSACIG00000003397) atraid (ENSACIG00000003435) eif2b4 (ENSACIG00000003490) nme6 (ENSACIG00000003601) ENSACIG00000003613 CHRNA2 (ENSACIG00000003625) ptk2bb (ENSACIG00000003644) zc3h14 (ENSACIG00000003703) batf (ENSACIG00000003744) #33 ENSACIG00000003765 #34 TGFB3 (ENSACIG00000003799) esrrb (ENSACIG00000003902) YLPM1 (ENSACIG00000003919) #20 ENSACIG00000004001 #21 DLST (ENSACIG00000004017) #22 jdp2b (ENSACIG00000004052) #32 ENSACIG00000004076 fosab (ENSACIG00000004214) #31 tmed10 (ENSACIG00000004425) #30 eif2b2 (ENSACIG00000004446) #25 vsx2 (ENSACIG00000004475) #11 ENSACIG00000004498 abcd4 (ENSACIG00000004535) #12 ENSACIG00000004575 kcnh5a (ENSACIG00000004587) L3HYPDH (ENSACIG00000004618) daam1b (ENSACIG00000004636) ppp1r13bb (ENSACIG00000004683) ENSACIG00000004714 ENSACIG00000004761 Percomorphaceae_C ANCESTRAL SPECIES 19 ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.d.b.b #34 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Percomorphaceae_D ANCESTRAL SPECIES 18 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Anabantaria ANCESTRAL SPECIES 20 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a ENSGT00510000047616.a.b Anabantoidei ANCESTRAL SPECIES 15 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a ENSGT00510000047616.a.b Climbing perch MODERN SPECIES 15 snx17 (ENSATEG00000005456) atraid (ENSATEG00000005637) eif2b4 (ENSATEG00000005544) nme6 (ENSATEG00000005750) ENSATEG00000025379 ENSATEG00000005801 ptk2bb (ENSATEG00000005837) ENSATEG00000005992 ENSATEG00000006018 ENSATEG00000029792 #33 ENSATEG00000006072 #34 ENSATEG00000029956 ENSATEG00000006182 YLPM1 (ENSATEG00000006214) #20 ENSATEG00000006311 #21 DLST (ENSATEG00000006339) #22 ENSATEG00000025438 ENSATEG00000006378 #32 ENSATEG00000006400 fosab (ENSATEG00000006737) #31 tmed10 (ENSATEG00000027216) #30 eif2b2 (ENSATEG00000007102) #25 ENSATEG00000007137 #11 ENSATEG00000007206 ENSATEG00000007157 #12 ENSATEG00000007202 ENSATEG00000007263 ENSATEG00000007294 ENSATEG00000027953 ENSATEG00000008155 HINT3 (ENSATEG00000026864) Siamese fighting fish MODERN SPECIES 13 snx17 (ENSBSLG00000026014) atraid (ENSBSLG00000005291) eif2b4 (ENSBSLG00000005391) nme6 (ENSBSLG00000005889) ENSBSLG00000005895 CHRNA2 (ENSBSLG00000005899) ptk2bb (ENSBSLG00000005909) ENSBSLG00000006291 zc3h14 (ENSBSLG00000006376) batf (ENSBSLG00000006452) #33 ENSBSLG00000006790 #34 TGFB3 (ENSBSLG00000007722) esrrb (ENSBSLG00000007771) YLPM1 (ENSBSLG00000007846) #20 ENSBSLG00000007977 #21 DLST (ENSBSLG00000007996) #22 ENSBSLG00000008123 JDP2 (ENSBSLG00000008200) #32 ENSBSLG00000008204 fosab (ENSBSLG00000008210) #31 tmed10 (ENSBSLG00000008221) #30 eif2b2 (ENSBSLG00000008254) #25 vsx2 (ENSBSLG00000008381) #11 abcd4 (ENSBSLG00000008462) #12 SGPP1 (ENSBSLG00000009354) kcnh5a (ENSBSLG00000009363) L3HYPDH (ENSBSLG00000009452) daam1b (ENSBSLG00000009464) ENSBSLG00000009534 ppp1r13bb (ENSBSLG00000009560) ENSBSLG00000010642 Zig-zag eel MODERN SPECIES 16 snx17 (ENSMAMG00000017090) atraid (ENSMAMG00000027046) eif2b4 (ENSMAMG00000017128) nme6 (ENSMAMG00000028337) ENSMAMG00000017175 ENSMAMG00000017183 ptk2bb (ENSMAMG00000017295) ENSMAMG00000017380 ENSMAMG00000017394 #33 ENSMAMG00000017405 #34 ENSMAMG00000025513 #34 ENSMAMG00000017415 ENSMAMG00000017424 YLPM1 (ENSMAMG00000017450) #20 ENSMAMG00000017474 #21 DLST (ENSMAMG00000027751) #22 ENSMAMG00000017509 ENSMAMG00000026076 #32 ENSMAMG00000017536 fosab (ENSMAMG00000024747) #31 tmed10 (ENSMAMG00000017781) #30 eif2b2 (ENSMAMG00000017801) #25 ENSMAMG00000017836 #11 ENSMAMG00000017858 #12 ENSMAMG00000017937 ENSMAMG00000017947 ENSMAMG00000017966 ENSMAMG00000017978 ENSMAMG00000018056 ENSMAMG00000020447 ENSMAMG00000020482 Carangaria ANCESTRAL SPECIES 18 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Carangaria_A ANCESTRAL SPECIES 13 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Seriola ANCESTRAL SPECIES 4 ENSGT00940000166128 ENSGT00390000016034 ENSGT00940000158349 ENSGT00940000155141.x ENSGT00940000155141.w.a ENSGT00510000047616.a.b ENSGT00510000047616.a.a ENSGT00940000153463.a.c.b ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000173326 ENSGT00940000157269.a.a Yellowtail amberjack MODERN SPECIES 2616 fdft1 (ENSSLDG00000002006) gata4 (ENSSLDG00000001986) ENSSLDG00000001970 ENSSLDG00000001924 ENSSLDG00000001917 ENSSLDG00000001868 ppp1r13bb (ENSSLDG00000001738) zc3h14 (ENSSLDG00000001706) batf (ENSSLDG00000001674) #33 ENSSLDG00000001655 #34 FLVCR2 (ENSSLDG00000001634) #34 TGFB3 (ENSSLDG00000001576) esrrb (ENSSLDG00000001520) YLPM1 (ENSSLDG00000001489) #20 ENSSLDG00000001437 #21 DLST (ENSSLDG00000001417) #22 jdp2b (ENSSLDG00000001400) #32 fosab (ENSSLDG00000001393) #31 ENSSLDG00000001386 tmed10 (ENSSLDG00000001343) #30 eif2b2 (ENSSLDG00000001301) #25 vsx2 (ENSSLDG00000001260) #11 ENSSLDG00000001238 Greater amberjack MODERN SPECIES 10 ctsbb (ENSSDUG00000015853) fdft1 (ENSSDUG00000015827) gata4 (ENSSDUG00000015806) ENSSDUG00000015796 ENSSDUG00000015755 ENSSDUG00000015730 ENSSDUG00000015696 ppp1r13bb (ENSSDUG00000015641) zc3h14 (ENSSDUG00000015595) batf (ENSSDUG00000015575) #33 FLVCR2 (ENSSDUG00000015509) #34 TGFB3 (ENSSDUG00000015416) esrrb (ENSSDUG00000015388) YLPM1 (ENSSDUG00000015345) #20 ENSSDUG00000015329 #21 DLST (ENSSDUG00000015306) #22 ENSSDUG00000015277 jdp2b (ENSSDUG00000015263) #32 ENSSDUG00000015080 fosab (ENSSDUG00000015050) #31 fosab (ENSSDUG00000014939) #31 tmed10 (ENSSDUG00000014920) #30 eif2b2 (ENSSDUG00000014892) #25 vsx2 (ENSSDUG00000014864) #11 ENSSDUG00000014824 abcd4 (ENSSDUG00000014738) #12 SGPP1 (ENSSDUG00000014727) kcnh5a (ENSSDUG00000014701) L3HYPDH (ENSSDUG00000014690) daam1b (ENSSDUG00000014610) ENSSDUG00000014582 Barramundi perch MODERN SPECIES 162 ENSLCAG00010008334 #34 ENSLCAG00010008338 #34 TGFB3 (ENSLCAG00010008342) esrrb (ENSLCAG00010008351) YLPM1 (ENSLCAG00010008365) #20 ENSLCAG00010008381 #21 DLST (ENSLCAG00010008407) #22 ENSLCAG00010008454 jdp2b (ENSLCAG00010008462) #32 ENSLCAG00010008465 fosab (ENSLCAG00010008466) #31 tmed10 (ENSLCAG00010008470) #30 eif2b2 (ENSLCAG00010008491) #25 vsx2 (ENSLCAG00010008520) #11 ENSLCAG00010008524 abcd4 (ENSLCAG00010008552) #12 SGPP1 (ENSLCAG00010008665) KCNH5 (ENSLCAG00010008671) L3HYPDH (ENSLCAG00010008674) daam1b (ENSLCAG00010008688) ppp1r13bb (ENSLCAG00010008755) ENSLCAG00010008765 Pleuronectoidei ANCESTRAL SPECIES 11 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a ENSGT00510000047616.a.b ENSGT00940000155141.w.a Tongue sole MODERN SPECIES 17 fdft1 (ENSCSEG00000020538) gata4 (ENSCSEG00000020533) ENSCSEG00000020531 ENSCSEG00000020528 si:dkey-25e12.3 (ENSCSEG00000020525) ppp1r13bb (ENSCSEG00000020508) daam1b (ENSCSEG00000020438) kcnh5a (ENSCSEG00000020428) SGPP1 (ENSCSEG00000020422) batf (ENSCSEG00000020408) #33 FLVCR2 (ENSCSEG00000020397) #34 TGFB3 (ENSCSEG00000020391) esrrb (ENSCSEG00000020387) YLPM1 (ENSCSEG00000020366) #20 ENSCSEG00000020361 #21 DLST (ENSCSEG00000019781) #22 jdp2b (ENSCSEG00000019774) #32 ENSCSEG00000019751 fosab (ENSCSEG00000019716) #31 tmed10 (ENSCSEG00000019711) #30 eif2b2 (ENSCSEG00000019706) #25 fez2b (ENSCSEG00000019701) wdr26b (ENSCSEG00000019687) ENSCSEG00000019680 naga (ENSCSEG00000019671) vegfab (ENSCSEG00000019656) mrps18a (ENSCSEG00000019650) rsph9 (ENSCSEG00000019644) tmem63a (ENSCSEG00000019640) POU3F2 (ENSCSEG00000019638) FAXC (ENSCSEG00000019635) Turbot MODERN SPECIES 12 snx17 (ENSSMAG00000011606) atraid (ENSSMAG00000011695) eif2b4 (ENSSMAG00000011712) nme6 (ENSSMAG00000011767) ENSSMAG00000031168 ptk2bb (ENSSMAG00000011886) ENSSMAG00000011810 ENSSMAG00000011970 ENSSMAG00000011976 ENSSMAG00000021677 #33 ENSSMAG00000012299 #34 ENSSMAG00000033798 ENSSMAG00000012264 YLPM1 (ENSSMAG00000012182) #20 ENSSMAG00000012176 #21 DLST (ENSSMAG00000012118) #22 ENSSMAG00000012103 #32 ENSSMAG00000012096 fosab (ENSSMAG00000012082) #31 tmed10 (ENSSMAG00000022433) #30 eif2b2 (ENSSMAG00000012038) #25 ENSSMAG00000012357 #11 ENSSMAG00000012400 ENSSMAG00000012436 #12 ENSSMAG00000012504 ENSSMAG00000012524 ENSSMAG00000012563 ENSSMAG00000012682 ENSSMAG00000012751 ENSSMAG00000012765 ENSSMAG00000012775 Eupercaria ANCESTRAL SPECIES 16 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.d.b.b #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Eupecaria_A ANCESTRAL SPECIES 16 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.d.b.b #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Ballan wrasse MODERN SPECIES 788 YLPM1 (ENSLBEG00000027816) #20 ENSLBEG00000027787 #21 DLST (ENSLBEG00000027754) #22 jdp2b (ENSLBEG00000027714) #32 ENSLBEG00000027704 fosab (ENSLBEG00000027696) #31 tmed10 (ENSLBEG00000027650) #30 eif2b2 (ENSLBEG00000027621) #25 Eupecaria_B ANCESTRAL SPECIES 16 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.d.b.b #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Perciformes ANCESTRAL SPECIES 14 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.d.b.b #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td ENSGT00940000153463.a.c.b Perciformes_a ANCESTRAL SPECIES 15 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.d.b.b #34 ENSGT01030000234625.B.d.d.b.a #34 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td ENSGT00940000153463.a.c.b Channel bull blenny MODERN SPECIES 16 zc3h14 (ENSCGOG00000015427) ENSCGOG00000015425 ptk2bb (ENSCGOG00000014104) CHRNA2 (ENSCGOG00000014067) ENSCGOG00000014063 nme6 (ENSCGOG00000014060) eif2b4 (ENSCGOG00000013795) atraid (ENSCGOG00000014050) snx17 (ENSCGOG00000013651) batf (ENSCGOG00000013647) #33 ENSCGOG00000013254 #34 TGFB3 (ENSCGOG00000013212) esrrb (ENSCGOG00000013178) YLPM1 (ENSCGOG00000013163) #20 ENSCGOG00000013159 #21 DLST (ENSCGOG00000013131) #22 jdp2b (ENSCGOG00000013123) #32 ENSCGOG00000013119 fosab (ENSCGOG00000013115) #31 tmed10 (ENSCGOG00000013100) #30 eif2b2 (ENSCGOG00000013036) #25 vsx2 (ENSCGOG00000013018) #11 ENSCGOG00000011773 abcd4 (ENSCGOG00000011151) #12 SGPP1 (ENSCGOG00000011124) KCNH5 (ENSCGOG00000011116) ENSCGOG00000011111 daam1b (ENSCGOG00000010945) ENSCGOG00000010907 ppp1r13bb (ENSCGOG00000010751) ENSCGOG00000010745 Pike perch MODERN SPECIES 4 eif2b4 (ENSSLUG00000003789) nme6 (ENSSLUG00000003754) ENSSLUG00000003744 CHRNA2 (ENSSLUG00000003727) ptk2bb (ENSSLUG00000003692) ENSSLUG00000003684 zc3h14 (ENSSLUG00000003669) batf (ENSSLUG00000025267) #33 ENSSLUG00000025264 #34 FLVCR2 (ENSSLUG00000025259) #34 TGFB3 (ENSSLUG00000025252) esrrb (ENSSLUG00000025248) ENSSLUG00000025243 #20 ENSSLUG00000025239 #20 ENSSLUG00000025235 #21 DLST (ENSSLUG00000025216) #22 ENSSLUG00000025204 JDP2 (ENSSLUG00000025202) #32 ENSSLUG00000025193 fosab (ENSSLUG00000025189) #31 tmed10 (ENSSLUG00000025188) #30 eif2b2 (ENSSLUG00000025183) #25 vsx2 (ENSSLUG00000025176) #11 ENSSLUG00000025145 abcd4 (ENSSLUG00000025106) #12 SGPP1 (ENSSLUG00000025093) ENSSLUG00000025091 L3HYPDH (ENSSLUG00000025088) daam1b (ENSSLUG00000025047) ppp1r13bb (ENSSLUG00000024949) ENSSLUG00000024920 Cottioidei ANCESTRAL SPECIES 23 ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT01000000215766 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Stickleback MODERN SPECIES 18 atraid (ENSGACG00000010698) eif2b4 (ENSGACG00000010680) ENSGACG00000010677 nme6 (ENSGACG00000010663) ENSGACG00000010660 cfap20 (ENSGACG00000010649) CHRNA2 (ENSGACG00000010624) ptk2bb (ENSGACG00000010609) zc3h14 (ENSGACG00000010599) batf (ENSGACG00000010594) #33 FLVCR2 (ENSGACG00000010588) #34 TGFB3 (ENSGACG00000010565) esrrb (ENSGACG00000010561) YLPM1 (ENSGACG00000010546) #20 ENSGACG00000010545 #21 DLST (ENSGACG00000010529) #22 ENSGACG00000010524 jdp2b (ENSGACG00000010513) #32 ENSGACG00000010481 fosab (ENSGACG00000010476) #31 tmed10 (ENSGACG00000010450) #30 eif2b2 (ENSGACG00000010441) #25 ENSGACG00000010367 abcd4 (ENSGACG00000010354) #12 SGPP1 (ENSGACG00000010351) kcnh5a (ENSGACG00000010336) L3HYPDH (ENSGACG00000010318) daam1b (ENSGACG00000010299) ppp1r13bb (ENSGACG00000010288) ENSGACG00000010284 NCOA7 (ENSGACG00000010278) Lumpfish MODERN SPECIES 16 snx17 (ENSCLMG00005018948) atraid (ENSCLMG00005019100) eif2b4 (ENSCLMG00005019101) ENSCLMG00005019127 ENSCLMG00005019131 CHRNA2 (ENSCLMG00005019132) ptk2bb (ENSCLMG00005019138) ENSCLMG00005019279 zc3h14 (ENSCLMG00005019281) batf (ENSCLMG00005019284) #33 FLVCR2 (ENSCLMG00005019286) #34 TGFB3 (ENSCLMG00005019292) ESRRB (ENSCLMG00005019316) YLPM1 (ENSCLMG00005019318) #20 ENSCLMG00005019321 #21 DLST (ENSCLMG00005019329) #22 ENSCLMG00005019540 JDP2 (ENSCLMG00005019541) #32 ENSCLMG00005019544 fosab (ENSCLMG00005019566) #31 tmed10 (ENSCLMG00005019567) #30 eif2b2 (ENSCLMG00005019569) #25 VSX2 (ENSCLMG00005019574) #11 ENSCLMG00005019594 abcd4 (ENSCLMG00005019603) #12 SGPP1 (ENSCLMG00005019790) KCNH5 (ENSCLMG00005019791) L3HYPDH (ENSCLMG00005019792) daam1b (ENSCLMG00005019800) ENSCLMG00005019926 ppp1r13bb (ENSCLMG00005019938) Eupecaria_C ANCESTRAL SPECIES 16 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.d.b.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 11 ENSGT00940000158687.a.a ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.d.b.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000157776.c.a #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00390000002032 ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a European seabass MODERN SPECIES 7 znf513a (ENSDLAG00005028318) snx17 (ENSDLAG00005009804) atraid (ENSDLAG00005026457) eif2b4 (ENSDLAG00005010066) nme6 (ENSDLAG00005010131) ENSDLAG00005010148 ENSDLAG00005010161 ptk2bb (ENSDLAG00005010190) ENSDLAG00005027993 ENSDLAG00005010517 ENSDLAG00005028314 #34 ENSDLAG00005029128 ENSDLAG00005010587 ENSDLAG00005010599 ENSDLAG00005010630 #21 ENSDLAG00005027128 #22 ENSDLAG00005010885 ENSDLAG00005026347 #32 ENSDLAG00005010932 fosab (ENSDLAG00005010958) #31 tmed10 (ENSDLAG00005010986) #30 eif2b2 (ENSDLAG00005032222) #25 ENSDLAG00005016948 #11 ENSDLAG00005021841 ENSDLAG00005011058 #12 ENSDLAG00005034267 ENSDLAG00005011850 ENSDLAG00005031391 ENSDLAG00005011986 ENSDLAG00005012000 ENSDLAG00005012214 Large yellow croaker MODERN SPECIES 482 znf513a (ENSLCRG00005013385) snx17 (ENSLCRG00005013304) atraid (ENSLCRG00005013298) eif2b4 (ENSLCRG00005013295) nme6 (ENSLCRG00005013289) ENSLCRG00005013288 CHRNA2 (ENSLCRG00005013284) ptk2bb (ENSLCRG00005013244) ENSLCRG00005013242 zc3h14 (ENSLCRG00005013240) batf (ENSLCRG00005013237) #33 FLVCR2 (ENSLCRG00005013234) #34 TGFB3 (ENSLCRG00005013233) esrrb (ENSLCRG00005013231) ENSLCRG00005013229 #21 ENSLCRG00005013228 #22 ENSLCRG00005013227 jdp2b (ENSLCRG00005013226) #32 ENSLCRG00005013225 fosab (ENSLCRG00005013224) #31 ENSLCRG00005013223 tmed10 (ENSLCRG00005013219) #30 eif2b2 (ENSLCRG00005013207) #25 vsx2 (ENSLCRG00005013203) #11 ENSLCRG00005012750 abcd4 (ENSLCRG00005011891) #12 SGPP1 (ENSLCRG00005011873) kcnh5a (ENSLCRG00005011847) L3HYPDH (ENSLCRG00005011845) daam1b (ENSLCRG00005011689) ppp1r13bb (ENSLCRG00005010456) Gilthead seabream MODERN SPECIES 14 atraid (ENSSAUG00010009719) eif2b4 (ENSSAUG00010009718) nme6 (ENSSAUG00010009716) ENSSAUG00010009715 CHRNA2 (ENSSAUG00010009713) ptk2bb (ENSSAUG00010009567) ENSSAUG00010009555 zc3h14 (ENSSAUG00010009551) batf (ENSSAUG00010009549) #33 FLVCR2 (ENSSAUG00010009399) #34 TGFB3 (ENSSAUG00010009390) esrrb (ENSSAUG00010009387) YLPM1 (ENSSAUG00010009369) #20 YLPM1 (ENSSAUG00010009355) #20 ENSSAUG00010009351 #21 DLST (ENSSAUG00010008933) #22 ENSSAUG00010008926 jdp2b (ENSSAUG00010008924) #32 ENSSAUG00010008923 fosab (ENSSAUG00010008920) #31 tmed10 (ENSSAUG00010008915) #30 eif2b2 (ENSSAUG00010008912) #25 vsx2 (ENSSAUG00010008905) #11 ENSSAUG00010008793 abcd4 (ENSSAUG00010007771) #12 SGPP1 (ENSSAUG00010007715) kcnh5a (ENSSAUG00010006956) L3HYPDH (ENSSAUG00010006928) daam1b (ENSSAUG00010006758) ppp1r13bb (ENSSAUG00010004582) ENSSAUG00010004531 Tetraodontidae ANCESTRAL SPECIES 15 ENSGT00950000183212.B ENSGT00390000017252 ENSGT00550000075009 ENSGT00940000160284 ENSGT00390000013853 ENSGT00940000158299.a ENSGT00940000157269.a.a ENSGT00440000038430 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837 #20 ENSGT00940000154790.b.b #21 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000155693.a.a #32 ENSGT00940000164930.b ENSGT00940000159276 #31 ENSGT00550000074954 #30 ENSGT00550000074908 #25 ENSGT00940000168254 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000158836.a.b ENSGT00940000156540.b ENSGT00940000156452.a.a ENSGT00940000153463.a.c.b ENSGT00510000047616.a.a ENSGT00510000047616.a.b ENSGT00940000155141.w.a Fugu MODERN SPECIES 7 snx17 (ENSTRUG00000007272) atraid (ENSTRUG00000028410) eif2b4 (ENSTRUG00000007639) nme6 (ENSTRUG00000007878) ENSTRUG00000007980 CHRNA2 (ENSTRUG00000008002) ptk2bb (ENSTRUG00000008406) ENSTRUG00000027910 ENSTRUG00000024798 zc3h14 (ENSTRUG00000009079) batf (ENSTRUG00000027959) #33 FLVCR2 (ENSTRUG00000019781) #34 TGFB3 (ENSTRUG00000009598) esrrb (ENSTRUG00000009721) ENSTRUG00000028021 #21 ENSTRUG00000010067 #22 jdp2b (ENSTRUG00000021670) #32 ENSTRUG00000010431 fos (ENSTRUG00000010579) #31 tmed10 (ENSTRUG00000010739) #30 eif2b2 (ENSTRUG00000010849) #25 ENSTRUG00000026930 ENSTRUG00000011086 abcd4 (ENSTRUG00000011285) #12 SGPP1 (ENSTRUG00000011371) ENSTRUG00000011415 daam1b (ENSTRUG00000011584) ppp1r13bb (ENSTRUG00000011779) ENSTRUG00000011980 ENSTRUG00000025277 NCOA7 (ENSTRUG00000012001) Protacanthopterygii ANCESTRAL SPECIES 120 ENSGT00940000157269.a.a ENSGT00940000173326 ENSGT00440000038430 ENSGT00550000074908 #25 ENSGT00550000074954 #30 ENSGT00940000159276 #31 ENSGT00940000164930.b ENSGT00940000155693.a.a #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b #34 ENSGT00940000155747.g.b ENSGT00940000153433.A.e ENSGT00440000039837.u.a #20 ENSGT00440000039837.u.b #20 ENSGT00940000154790.b.a.a #21 ENSGT00930000151014.r #22 ENSGT00940000154297.A.g.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 1162 ENSGT00440000039837.u.a.a #20 ENSGT00940000154790.b.a.a.b #21 ENSGT00930000151014.r.c #22 ENSGT00940000154297.A.g.b Huchen MODERN SPECIES 2873 YLPM1 (ENSHHUG00000024988) #20 PROX2 (ENSHHUG00000025003) #21 DLST (ENSHHUG00000025020) #22 ENSHHUG00000025037 Salmoninae_a ANCESTRAL SPECIES 30 ENSGT00940000158299.a.d ENSGT00940000157269.a.a.g ENSGT00940000173326 ENSGT00440000038430 ENSGT00550000074908.o #25 ENSGT00550000074954.p.b #30 ENSGT00940000159276.h #31 ENSGT00940000164930.b.c ENSGT00940000155693.a.a.c.b #32 ENSGT00940000159745.c.a #33 ENSGT01030000234625.B.d.c.b.c #34 ENSGT00940000155747.g.b.a ENSGT00940000153433.A.e.e ENSGT00440000039837.u.a.a #20 ENSGT00940000154790.b.a.a.b #21 ENSGT00930000151014.r.c #22 ENSGT00940000154297.A.g.b ENSGT00940000157776.c.a.c #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000155621.wc ENSGT00940000154928.c.a.b.a ENSGT00940000155500.f.f ENSGT00390000013141.d ENSGT00940000166937 ENSGT00950000182774.b.a.b.a.b.a.a.a.b.a.b ENSGT00950000183149.C.b.b ENSGT00940000157136.b.h ENSGT00940000159860.e ENSGT01050000244824.B.m.b ENSGT01030000234597.a.b.a.b.a.a Salmo ANCESTRAL SPECIES 12 ENSGT00940000157269.a.a.g ENSGT00940000173326 ENSGT00440000038430 ENSGT00550000074908.o #25 ENSGT00550000074954.p.b #30 ENSGT00940000159276.h #31 ENSGT00940000164930.b.c ENSGT00940000155693.a.a.c.b #32 ENSGT00940000159745.c.a #33 ENSGT01030000234625.B.d.c.b.c #34 ENSGT01060000250365 ENSGT00940000155747.g.b.a ENSGT00940000153433.A.e.e ENSGT00440000039837.u.a.a #20 ENSGT00940000154790.b.a.a.b #21 ENSGT00930000151014.r.c #22 ENSGT00940000154297.A.g.b ENSGT00940000157776.c.a.c #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b #12 ENSGT00940000155621.wc ENSGT00940000154928.c.a.b.a ENSGT00940000155500.f.f.d ENSGT00940000155500.f.f.c ENSGT00390000013141.d ENSGT00940000166937 ENSGT00950000182774.b.a.b.a.b.a.a.a.b.a.b ENSGT00950000183149.C.b.b ENSGT00940000157136.b.h ENSGT00940000159860.e ENSGT01050000244824.B.m.b River trout MODERN SPECIES ENSSTUG00000003205 zc3h14 (ENSSTUG00000003212) eif2b2 (ENSSTUG00000003266) #25 tmed10 (ENSSTUG00000003460) #30 fosab (ENSSTUG00000003545) #31 ENSSTUG00000003557 jdp2b (ENSSTUG00000003563) #32 batf (ENSSTUG00000003592) #33 FLVCR2 (ENSSTUG00000003627) #34 ENSSTUG00000004052 TGFB3 (ENSSTUG00000004067) ENSSTUG00000004100 esrrb (ENSSTUG00000004129) YLPM1 (ENSSTUG00000004188) #20 ENSSTUG00000004293 #21 DLST (ENSSTUG00000004322) #22 ENSSTUG00000004417 vsx2 (ENSSTUG00000004435) #11 ENSSTUG00000004541 abcd4 (ENSSTUG00000005458) #12 ENSSTUG00000006508 HMBOX1 (ENSSTUG00000006541) KIF13B (ENSSTUG00000006625) ENSSTUG00000008633 elp3 (ENSSTUG00000008675) si:ch211-63o20.7 (ENSSTUG00000008818) ENSSTUG00000008830 pnocb (ENSSTUG00000008844) znf395b (ENSSTUG00000008848) paqr8 (ENSSTUG00000008862) stmn4 (ENSSTUG00000008893) Atlantic salmon MODERN SPECIES 25 tmed10 (ENSSSAG00000121115) #30 fosab (ENSSSAG00000109807) #31 ENSSSAG00000082404 jdp2b (ENSSSAG00000050967) #32 ENSSSAG00000111782 #33 FLVCR2 (ENSSSAG00000121196) #34 ENSSSAG00000119318 ENSSSAG00000050848 ENSSSAG00000116256 ENSSSAG00000110988 ENSSSAG00000119991 ENSSSAG00000110761 YLPM1 (ENSSSAG00000050827) #20 ENSSSAG00000050821 #21 ENSSSAG00000089828 DLST (ENSSSAG00000103763) #22 ENSSSAG00000050768 ENSSSAG00000050757 #11 ENSSSAG00000050699 ENSSSAG00000062923 #12 ENSSSAG00000050666 ENSSSAG00000109642 ENSSSAG00000050640 ENSSSAG00000044344 elp3 (ENSSSAG00000043627) si:ch211-63o20.7 (ENSSSAG00000043610) ENSSSAG00000117071 pnocb (ENSSSAG00000115566) znf395b (ENSSSAG00000043583) paqr8 (ENSSSAG00000106493) mcm3 (ENSSSAG00000043532) Oncorhynchus ANCESTRAL SPECIES 30 ENSGT00940000158299.a.d ENSGT00940000157269.a.a.g ENSGT00940000173326 ENSGT00440000038430 ENSGT00550000074908.o #25 ENSGT00550000074954.p.b #30 ENSGT00940000159276.h #31 ENSGT00940000164930.b.c ENSGT00940000155693.a.a.c.b #32 ENSGT00940000159745.d #33 ENSGT01030000234625.B.d.c.b.c #34 ENSGT00940000155747.g.b.a ENSGT00940000153433.A.e.e ENSGT00440000039837.u.a.a #20 ENSGT00940000154790.b.a.a.b #21 ENSGT00930000151014.r.c #22 ENSGT00940000157776.c.a.c #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b.r #12 ENSGT00940000155621.wc ENSGT00940000154928.c.a.b.a ENSGT00940000155500.f.f ENSGT01030000235770 ENSGT00390000013141.d ENSGT00940000166937 ENSGT00950000182774.b.a.b.a.b.a.a.a.b.a.b ENSGT00950000183149.C.b.b ENSGT00940000157136.b.h ENSGT00940000159860.e ENSGT01030000234597.a.b.a.b.a.a ENSGT00390000007874.d #13 Rainbow trout MODERN SPECIES 25 ENSOMYG00000062435 ENSOMYG00000030088 zc3h14 (ENSOMYG00000030041) eif2b2 (ENSOMYG00000029925) #25 tmed10 (ENSOMYG00000058487) #30 fosab (ENSOMYG00000029885) #31 ENSOMYG00000055608 ENSOMYG00000075604 JDP2 (ENSOMYG00000029811) #32 ENSOMYG00000062253 #33 FLVCR2 (ENSOMYG00000029756) #34 ENSOMYG00000029645 ENSOMYG00000059526 YLPM1 (ENSOMYG00000029570) #20 ENSOMYG00000070351 #21 DLST (ENSOMYG00000029020) #22 ENSOMYG00000028747 #11 ENSOMYG00000028732 ENSOMYG00000028708 #12 ENSOMYG00000057616 ENSOMYG00000028674 ENSOMYG00000069168 ENSOMYG00000028638 ENSOMYG00000065766 elp3 (ENSOMYG00000028579) si:ch211-63o20.7 (ENSOMYG00000028549) ENSOMYG00000028530 pnocb (ENSOMYG00000028482) znf395b (ENSOMYG00000028442) paqr8 (ENSOMYG00000028432) stmn4 (ENSOMYG00000028415) Oncorhynchus_a ANCESTRAL SPECIES 65 ENSGT00940000173326 ENSGT00440000038430 ENSGT00550000074908.o #25 ENSGT00550000074954.p.b #30 ENSGT00940000159276.h #31 ENSGT00940000164930.b.c ENSGT00940000155693.a.a.c.b #32 ENSGT00940000159745.c.a #33 ENSGT00940000159745.d #33 ENSGT01030000234625.B.d.c.b.c #34 ENSGT01060000250365 ENSGT00940000155747.g.b.a ENSGT00940000153433.A.e.e ENSGT00440000039837.u.a.a #20 ENSGT00940000154790.b.a.a.b #21 ENSGT00930000151014.r.c #22 ENSGT00940000157776.c.a.c #11 ENSGT00940000165253 ENSGT00950000182955.a.a.b.r #12 ENSGT00940000155621.wc ENSGT00940000154928.c.a.b.a ENSGT01030000235770 ENSGT00390000013141.d ENSGT00940000166937 ENSGT00950000182774.b.a.b.a.b.a.a.a.b.a.b ENSGT00950000183149.C.b.b ENSGT00940000157136.b.h ENSGT00940000159860.e ENSGT01030000234597.a.b.a.b.a.a ENSGT00390000007874.d #13 ENSGT01100000265031 Chinook salmon MODERN SPECIES 166 esrrb (ENSOTSG00005040338) YLPM1 (ENSOTSG00005040340) #20 ENSOTSG00005040343 #21 DLST (ENSOTSG00005040350) #22 ENSOTSG00005040495 LRATD2 (ENSOTSG00005040498) Coho salmon MODERN SPECIES 13 eif2b2 (ENSOKIG00005037646) #25 tmed10 (ENSOKIG00005037610) #30 fosab (ENSOKIG00005037590) #31 ENSOKIG00005037581 jdp2b (ENSOKIG00005037560) #32 BATF (ENSOKIG00005037479) #33 ENSOKIG00005037463 ENSOKIG00005037454 ENSOKIG00005037448 FLVCR2 (ENSOKIG00005037342) #34 ENSOKIG00005037302 TGFB3 (ENSOKIG00005037277) ENSOKIG00005037218 YLPM1 (ENSOKIG00005037183) #20 ENSOKIG00005037169 #21 DLST (ENSOKIG00005036997) #22 VSX2 (ENSOKIG00005036925) #11 ENSOKIG00005036441 abcd4 (ENSOKIG00005035738) #12 ENSOKIG00005035671 HMBOX1 (ENSOKIG00005035647) ENSOKIG00005035639 KIF13B (ENSOKIG00005019550) ENSOKIG00005019482 si:ch211-63o20.7 (ENSOKIG00005019467) elp3 (ENSOKIG00005019388) ENSOKIG00005019361 pnocb (ENSOKIG00005019355) znf395b (ENSOKIG00005019351) paqr8 (ENSOKIG00005019342) stmn4 (ENSOKIG00005019319) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 2100 ENSGT00970000197764 ENSGT00930000151014.r.d.a.a #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00930000151014.r.d.a.a #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00930000151014.r.d.a.a #22 Oncorhynchus_a ANCESTRAL SPECIES 81 ENSGT00550000075009.c ENSGT00390000013853 ENSGT00940000158299.a.c ENSGT00940000157269.a.a.h ENSGT00550000074908.p #25 ENSGT00550000074954.p.a #30 ENSGT00940000159276.g #31 ENSGT00940000164930.b.d ENSGT00940000155693.a.a.c.a #32 ENSGT00940000159745.c.b #33 ENSGT01030000234625.B.d.c.b.d #34 ENSGT00940000155747.g.b.b ENSGT00940000153433.A.e.f ENSGT00440000039837.u.a.b #20 ENSGT00940000154790.b.a.a.a #21 ENSGT00930000151014.r.d.a.a #22 ENSGT00940000157776.c.a.d #11 ENSGT00940000154928.c.a.b.b ENSGT00940000155500.f.e ENSGT00950000183149.C.b.a ENSGT00940000157136.b.g ENSGT01050000244824.B.m.a ENSGT00940000156618.c.a ENSGT01030000234597.a.b.a.b.a.b ENSGT01030000234633.A.a.b ENSGT00390000007874.c #13 ENSGT00950000183147.A.a.g.b.c #14 ENSGT00940000167177.c.a ENSGT00940000153635.B.c.b ENSGT00940000157624.a.f ENSGT00390000016097.c.d Coho salmon MODERN SPECIES 3 ENSOKIG00005009255 CHRNA2 (ENSOKIG00005009268) ptk2bb (ENSOKIG00005009356) ENSOKIG00005009552 eif2b2 (ENSOKIG00005009565) #25 TMED10 (ENSOKIG00005009599) #30 fosab (ENSOKIG00005009637) #31 ENSOKIG00005009647 jdp2b (ENSOKIG00005009659) #32 batf (ENSOKIG00005009686) #33 FLVCR2 (ENSOKIG00005009731) #34 TGFB3 (ENSOKIG00005010041) ESRRB (ENSOKIG00005010119) YLPM1 (ENSOKIG00005026354) #20 ENSOKIG00005026377 #21 DLST (ENSOKIG00005026388) #22 VSX2 (ENSOKIG00005026433) #11 HMBOX1 (ENSOKIG00005026443) KIF13B (ENSOKIG00005026499) ENSOKIG00005026767 znf395b (ENSOKIG00005026773) ENSOKIG00005026789 il17a/f3 (ENSOKIG00005026812) stmn4 (ENSOKIG00005026834) ENSOKIG00005026850 ENSOKIG00005026855 ENSOKIG00005026864 vrtn (ENSOKIG00005026992) #13 ENSOKIG00005027002 #14 ENSOKIG00005027015 ENSOKIG00005027030 Huchen MODERN SPECIES 1810 ENSHHUG00000012566 st6galnac1.1 (ENSHHUG00000012568) ENSHHUG00000012580 ENSHHUG00000012588 LIX1L (ENSHHUG00000012592) sf3b4 (ENSHHUG00000012597) SV2A (ENSHHUG00000012600) ENSHHUG00000012615 jarid2b (ENSHHUG00000012620) ENSHHUG00000012678 ENSHHUG00000012681 #22 ENSHHUG00000012700 Salmoninae ANCESTRAL SPECIES ENSGT00930000151014.r.d.a.b #22 Huchen MODERN SPECIES 519 ENSHHUG00000028170 ENSHHUG00000028164 #22 nkd1 (ENSHHUG00000028151) ENSHHUG00000028144 ENSHHUG00000028135 ENSHHUG00000028126 CYLD (ENSHHUG00000027831) sall1a (ENSHHUG00000027823) ENSHHUG00000027793 TOX3 (ENSHHUG00000027789) Salmoninae ANCESTRAL SPECIES 369 ENSGT00940000158299.a.d ENSGT00940000157269.a.a.g ENSGT00940000173326 ENSGT00440000038430 ENSGT00550000074908.o #25 ENSGT00550000074954.p.b #30 ENSGT00940000159276.h #31 ENSGT00940000164930.b.c ENSGT00940000155693.a.a.c.b #32 ENSGT00940000159745 #33 ENSGT01030000234625.B.d.c.b.d #34 ENSGT00940000155747.g.b.b ENSGT00940000153433.A.e ENSGT00440000039837.u.a.b #20 ENSGT00940000154790.b.a.a.a #21 ENSGT00930000151014.r.d.b #22 Salmoninae_a ANCESTRAL SPECIES 68 ENSGT00390000013853 ENSGT00940000158299.a.c ENSGT00940000157269.a.a.h ENSGT00960000190405 ENSGT00550000074908.p #25 ENSGT00550000074954.p.a #30 ENSGT00940000159276.g #31 ENSGT00940000164930.b.d ENSGT00940000155693.a.a.c.a #32 ENSGT00940000159745.c.b #33 ENSGT01030000234625.B.d.c.b.d #34 ENSGT00940000155747.g.b.b ENSGT00940000153433.A.e.f ENSGT00440000039837.u.a.b #20 ENSGT00940000154790.b.a.a.a #21 ENSGT00930000151014.r.d.b #22 ENSGT00940000157776.c.a.d #11 ENSGT00940000154928.c.a.b.b ENSGT00940000155500.f.e ENSGT00950000183149.C.b.a ENSGT00940000157136.b.g ENSGT01050000244824.B.m.a ENSGT00940000156618.c.a ENSGT01030000234597.a.b.a.b.a.b ENSGT01030000234633.A.a.b ENSGT00390000007874.c #13 ENSGT00950000183147.A.a.g.b.c #14 ENSGT00940000167177.c.a ENSGT00940000153635.B.c.b ENSGT00940000157624.a.f ENSGT00390000011890.l Oncorhynchus ANCESTRAL SPECIES 55 ENSGT00390000013853 ENSGT00940000158299.a.c ENSGT00940000157269.a.a.h ENSGT00960000190405 ENSGT00550000074908.p #25 ENSGT00550000074954.p.a #30 ENSGT00940000159276.g #31 ENSGT00940000164930.b.d ENSGT00940000155693.a.a.c.a #32 ENSGT00940000159745.c.b #33 ENSGT01030000234625.B.d.c.b.d #34 ENSGT00940000155747.g.b.b ENSGT00940000153433.A.e.f ENSGT00440000039837.u.a.b #20 ENSGT00940000154790.b.a.a.a #21 ENSGT00930000151014.r.d.b #22 ENSGT00940000157776.c.a.d #11 ENSGT00940000154928.c.a.b.b ENSGT00940000155500.f.e ENSGT00950000183149.C.b.a ENSGT00940000157136.b.g ENSGT01050000244824.B.m.a ENSGT00940000156618.c.a ENSGT01030000234597.a.b.a.b.a.b ENSGT01030000234633.A.a.b ENSGT00390000007874.c #13 ENSGT00950000183147.A.a.g.b.c #14 ENSGT00940000167177.c.a ENSGT00940000153635.B.c.b ENSGT00940000157624.a.f ENSGT00390000016097.c.d Oncorhynchus_a ANCESTRAL SPECIES ENSGT00930000151014.r.d.b #22 Chinook salmon MODERN SPECIES 379 ENSOTSG00005028570 #20 PROX2 (ENSOTSG00005028572) #21 DLST (ENSOTSG00005028573) #22 Rainbow trout MODERN SPECIES 29 ENSOMYG00000002028 ENSOMYG00000061301 ENSOMYG00000002127 eif2b2 (ENSOMYG00000002165) #25 ENSOMYG00000002189 #30 fosab (ENSOMYG00000002207) #31 ENSOMYG00000002214 jdp2b (ENSOMYG00000069154) #32 batf (ENSOMYG00000064037) #33 FLVCR2 (ENSOMYG00000002311) #34 ENSOMYG00000070180 ENSOMYG00000064812 ENSOMYG00000054627 YLPM1 (ENSOMYG00000073604) #20 ENSOMYG00000002458 #21 DLST (ENSOMYG00000069400) #22 ENSOMYG00000002517 #11 ENSOMYG00000002541 ENSOMYG00000002565 ENSOMYG00000048281 ENSOMYG00000077685 ENSOMYG00000074150 pnocb (ENSOMYG00000002654) znf395b (ENSOMYG00000002692) ENSOMYG00000075400 mcm3 (ENSOMYG00000069397) ENSOMYG00000003616 stmn4 (ENSOMYG00000003536) emilin1a (ENSOMYG00000068144) ENSOMYG00000059677 vrtn (ENSOMYG00000003729) #13 Salmo ANCESTRAL SPECIES 52 ENSGT00390000013853 ENSGT00940000158299.a.c ENSGT00940000157269.a.a.h ENSGT00960000190405 ENSGT00550000074908.p #25 ENSGT00550000074954.p.a #30 ENSGT00940000159276.g #31 ENSGT00940000164930.b.d ENSGT00940000155693.a.a.c.a #32 ENSGT00940000159745.c.b #33 ENSGT01030000234625.B.d.c.b.d #34 ENSGT00940000155747.g.b.b ENSGT00940000153433.A.e.f ENSGT00440000039837.u.a.b #20 ENSGT00940000154790.b.a.a.a #21 ENSGT00930000151014.r.d.b #22 ENSGT00940000157776.c.a.d #11 ENSGT00940000154928.c.a.b.b ENSGT00940000155500.f.e ENSGT00950000183149.C.b.a ENSGT00940000157136.b.g ENSGT01050000244824.B.m.a ENSGT00940000156618.c.a ENSGT01100000266732 ENSGT01030000234597.a.b.a.b.a.b ENSGT01030000234633.A.a.b ENSGT00390000007874.c #13 ENSGT00950000183147.A.a.g.b.c #14 ENSGT00940000167177.c.a ENSGT00940000153635.B.c.a.a ENSGT00940000157624.a.f Atlantic salmon MODERN SPECIES 6 ptk2bb (ENSSSAG00000051167) ENSSSAG00000087346 ENSSSAG00000103759 ei2bb (ENSSSAG00000046540) #25 ENSSSAG00000046606 #30 fosab (ENSSSAG00000046644) #31 ENSSSAG00000121719 jdp2b (ENSSSAG00000046701) #32 batf (ENSSSAG00000046729) #33 FLVCR2 (ENSSSAG00000050878) #34 ENSSSAG00000111561 ENSSSAG00000046852 YLPM1 (ENSSSAG00000046863) #20 ENSSSAG00000102016 #21 ENSSSAG00000085263 DLST (ENSSSAG00000050787) #22 ENSSSAG00000114459 ENSSSAG00000087627 ENSSSAG00000110290 ENSSSAG00000047064 ELP3 (ENSSSAG00000111667) ENSSSAG00000119832 pnocb (ENSSSAG00000082859) znf395b (ENSSSAG00000055437) mcm3 (ENSSSAG00000055449) stmn4 (ENSSSAG00000046831) il17a/f3 (ENSSSAG00000056094) ENSSSAG00000093523 ENSSSAG00000090511 emilin1a (ENSSSAG00000066717) vrtn (ENSSSAG00000113477) #13 River trout MODERN SPECIES 28 ptk2bb (ENSSTUG00000029340) ENSSTUG00000029319 ENSSTUG00000029309 eif2b2 (ENSSTUG00000029247) #25 tmed10 (ENSSTUG00000029204) #30 fosab (ENSSTUG00000029199) #31 ENSSTUG00000029190 jdp2b (ENSSTUG00000029161) #32 batf (ENSSTUG00000029151) #33 FLVCR2 (ENSSTUG00000029109) #34 TGFB3 (ENSSTUG00000029100) esrrb (ENSSTUG00000029072) ENSSTUG00000029054 #20 ENSSTUG00000029051 #20 ENSSTUG00000029044 #21 DLST (ENSSTUG00000028982) #22 vsx2 (ENSSTUG00000028977) #11 HMBOX1 (ENSSTUG00000028950) KIF13B (ENSSTUG00000027521) pnocb (ENSSTUG00000027483) znf395b (ENSSTUG00000027477) ENSSTUG00000027457 stmn4 (ENSSTUG00000027431) syndig1l (ENSSTUG00000027423) #14 ENSSTUG00000048631 ENSSTUG00000048629 ENSSTUG00000048624 ENSSTUG00000048622 ENSSTUG00000048618 rab15 (ENSSTUG00000048613) ENSSTUG00000048611 Osteoglossiformes ANCESTRAL SPECIES 55 ENSGT00800000124176 #26 ENSGT00550000074908 #25 ENSGT00550000074954.r.a #30 ENSGT00940000159276.a #31 ENSGT00940000164930.c ENSGT00940000155693.a.a #32 ENSGT01030000234625.B.d.c.c #34 ENSGT00390000010925 #36 ENSGT00940000162910 ENSGT00940000162939 #35 ENSGT00940000155747.g.a ENSGT00390000012060 #37 ENSGT00410000025698.b ENSGT00940000153433.A.f ENSGT00940000154790.b.a.b #21 ENSGT00930000151014 #22 ENSGT00940000159815 #23 ENSGT00940000154297.A.g.a ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B #19 ENSGT00940000156723 #18 ENSGT00940000160884 #17 ENSGT00940000156829 ENSGT00390000008402 #10 ENSGT00940000157776 #11 Asian bonytongue MODERN SPECIES 6 MLH3 (ENSSFOG00015023979) #26 eif2b2 (ENSSFOG00015023976) #25 tmed10 (ENSSFOG00015033273) #30 fosab (ENSSFOG00015023971) #31 ENSSFOG00015023968 ENSSFOG00015024679 #32 batf (ENSSFOG00015030749) #33 FLVCR2 (ENSSFOG00015008109) #34 ERG28 (ENSSFOG00015032324) #36 ENSSFOG00015027867 tgfb3 (ENSSFOG00015031700) IFT43 (ENSSFOG00015023942) #37 GPATCH2L (ENSSFOG00015023938) ESRRB (ENSSFOG00015023935) prox2 (ENSSFOG00015023932) #21 dlst (ENSSFOG00015023927) #22 RPS6KL1 (ENSSFOG00015023920) #23 LRRC74A (ENSSFOG00015023917) ANGEL1 (ENSSFOG00015023916) VASH1 (ENSSFOG00015023912) fcf1 (ENSSFOG00015029115) #19 AREL1 (ENSSFOG00015023906) #18 LTBP2 (ENSSFOG00015023881) #17 pomt2 (ENSSFOG00015023871) vsx2 (ENSSFOG00015030957) #11 ENSSFOG00015009137 EIF2AK4 (ENSSFOG00015009191) ACTC1 (ENSSFOG00015009323) arhgap11a (ENSSFOG00015009334) SCG5 (ENSSFOG00015027666) GREM1 (ENSSFOG00015030421) P. kingsleyae MODERN SPECIES 24 eif2b2 (ENSPKIG00000002826) #25 TMED10 (ENSPKIG00000002867) #30 fosab (ENSPKIG00000002938) #31 ENSPKIG00000002955 jdp2b (ENSPKIG00000002981) #32 batf (ENSPKIG00000003014) #33 FLVCR2 (ENSPKIG00000003023) #34 ERG28 (ENSPKIG00000003041) #36 ENSPKIG00000003052 ENSPKIG00000003073 #35 tgfb3 (ENSPKIG00000003114) IFT43 (ENSPKIG00000003158) #37 GPATCH2L (ENSPKIG00000003198) ESRRB (ENSPKIG00000003231) prox2 (ENSPKIG00000003249) #21 dlst (ENSPKIG00000003270) #22 RPS6KL1 (ENSPKIG00000003306) #23 LRRC74A (ENSPKIG00000003331) ENSPKIG00000003362 VASH1 (ENSPKIG00000003394) fcf1 (ENSPKIG00000003415) #19 AREL1 (ENSPKIG00000003455) #18 LTBP2 (ENSPKIG00000003529) #17 ENSPKIG00000003584 pomt2 (ENSPKIG00000003634) lin52 (ENSPKIG00000003735) #10 vsx2 (ENSPKIG00000003775) #11 ENSPKIG00000003800 capn8 (ENSPKIG00000003843) capn2b (ENSPKIG00000003898) capn1b (ENSPKIG00000003990) Spotted gar MODERN SPECIES 673 vrtn (ENSLOCG00000017704) #13 syndig1l (ENSLOCG00000010870) #14 isca2 (ENSLOCG00000010860) #16 npc2.1 (ENSLOCG00000010850) #15 gskip (ENSLOCG00000010833) ATG2B (ENSLOCG00000010820) ENSLOCG00000010816 zgc:163014 (ENSLOCG00000010791) gstz1 (ENSLOCG00000010781) pomt2 (ENSLOCG00000010763) LTBP2 (ENSLOCG00000010749) #17 AREL1 (ENSLOCG00000010734) #18 fcf1 (ENSLOCG00000010728) #19 YLPM1 (ENSLOCG00000010710) #20 prox2 (ENSLOCG00000010701) #21 dlst (ENSLOCG00000010687) #22 RPS6KL1 (ENSLOCG00000010678) #23 OLFM4 (ENSLOCG00000010671) LRRC74A (ENSLOCG00000010657) ANGEL1 (ENSLOCG00000010649) VASH1 (ENSLOCG00000010644) esrrb (ENSLOCG00000010630) GPATCH2L (ENSLOCG00000010621) IFT43 (ENSLOCG00000010599) #37 tgfb3 (ENSLOCG00000010588) ENSLOCG00000010563 ERG28 (ENSLOCG00000010553) #36 FLVCR2 (ENSLOCG00000010536) #34 batf (ENSLOCG00000010533) #33 jdp2b (ENSLOCG00000010526) #32 ENSLOCG00000010517 Reedfish MODERN SPECIES 7 npc2.1 (ENSECRG00000017040) #15 gskip (ENSECRG00000017056) ATG2B (ENSECRG00000014756) NOXRED1 (ENSECRG00000014839) ENSECRG00000014869 tmed8 (ENSECRG00000014905) zgc:163014 (ENSECRG00000014930) gstz1 (ENSECRG00000014979) pomt2 (ENSECRG00000015052) ENSECRG00000015129 LTBP2 (ENSECRG00000015364) #17 AREL1 (ENSECRG00000016999) #18 fcf1 (ENSECRG00000017173) #19 YLPM1 (ENSECRG00000017271) #20 prox2 (ENSECRG00000017356) #21 dlst (ENSECRG00000017406) #22 RPS6KL1 (ENSECRG00000017451) #23 LRRC74A (ENSECRG00000017495) ANGEL1 (ENSECRG00000017561) VASH1 (ENSECRG00000017605) esrrb (ENSECRG00000017650) GPATCH2L (ENSECRG00000017699) IFT43 (ENSECRG00000017783) #37 tgfb3 (ENSECRG00000017817) ENSECRG00000017841 ENSECRG00000017869 ERG28 (ENSECRG00000017922) #36 FLVCR2 (ENSECRG00000017949) #34 batf (ENSECRG00000017990) #33 jdp2b (ENSECRG00000017998) #32 ENSECRG00000018013 Elephant shark MODERN SPECIES 1701 cryba2b (ENSCMIG00000012759) fev (ENSCMIG00000012760) cdk5r2b (ENSCMIG00000012761) WNT6 (ENSCMIG00000012764) ENSCMIG00000012768 ENSCMIG00000012769 ENSCMIG00000012770 AREL1 (ENSCMIG00000012772) #18 fcf1 (ENSCMIG00000012844) #19 ENSCMIG00000012860 #20 ENSCMIG00000012865 #20 ENSCMIG00000012871 #21 dlst (ENSCMIG00000012897) #22 ENSCMIG00000012942 #23 ENSCMIG00000012950 tc2n (ENSCMIG00000012965) fbln5 (ENSCMIG00000012982) trip11 (ENSCMIG00000013012) ccdc85cb (ENSCMIG00000013051) CCNK (ENSCMIG00000013053) setd3 (ENSCMIG00000013072) Cyclostomata DUPLICATION Cyclostomata ANCESTRAL SPECIES ENSGT00930000151014.a #22 Lamprey MODERN SPECIES 3535 ENSPMAG00000008212 #22 Hagfish MODERN SPECIES 570 ENSEBUG00000014310 ENSEBUG00000004673 styx (ENSEBUG00000010180) ENSEBUG00000006901 ENSEBUG00000015293 ENSEBUG00000004246 ENSEBUG00000016050 ENSEBUG00000004758 ENSEBUG00000010255 ENSEBUG00000016448 ENSEBUG00000002396 ENSEBUG00000010429 ENSEBUG00000012925 ENSEBUG00000006497 ENSEBUG00000014624 dlst (ENSEBUG00000013434) #22 ENSEBUG00000002002 ENSEBUG00000001035 ENSEBUG00000001156 GANAB (ENSEBUG00000008019) ENSEBUG00000002963 memo1 (ENSEBUG00000000799) ENSEBUG00000007304 Cyclostomata ANCESTRAL SPECIES ENSGT00930000151014.b #22 Lamprey MODERN SPECIES 4019 ENSPMAG00000002362 #22 Ciona ANCESTRAL SPECIES 580 ENSGT00390000001063 ENSGT00930000151014 #22 ENSGT00940000164184 Ciona intestinalis MODERN SPECIES 13 ENSCING00000023883 ENSCING00000019990 ENSCING00000006909 ENSCING00000013053 ENSCING00000006877 ENSCING00000006884 ENSCING00000006900 ENSCING00000006905 ENSCING00000020507 ENSCING00000006874 ENSCING00000020850 ENSCING00000006826 ENSCING00000013044 ENSCING00000001953 ENSCING00000006828 ENSCING00000006831 #22 ENSCING00000006838 ENSCING00000010918 ENSCING00000013046 ENSCING00000018983 ENSCING00000024189 ENSCING00000006847 ENSCING00000006855 ENSCING00000013048 lmx (ENSCING00000006856) ENSCING00000006857 ENSCING00000019740 ENSCING00000024534 ENSCING00000023113 ENSCING00000006866 ENSCING00000013043 Ciona savignyi MODERN SPECIES 263 ENSCSAVG00000010280 ENSCSAVG00000010281 ENSCSAVG00000010294 ENSCSAVG00000010303 ENSCSAVG00000010307 ENSCSAVG00000010309 ENSCSAVG00000010312 ENSCSAVG00000010313 ENSCSAVG00000010315 ENSCSAVG00000010317 ENSCSAVG00000010318 ENSCSAVG00000010320 ENSCSAVG00000010324 ENSCSAVG00000010327 ENSCSAVG00000010332 ENSCSAVG00000010337 #22 ENSCSAVG00000010348 ENSCSAVG00000010349 ENSCSAVG00000010362 Ecdysozoa ANCESTRAL SPECIES ENSGT00930000151014 #22 Caenorhabditis elegans MODERN SPECIES 5 srh-28 (WBGene00005251) ZC404.16 (WBGene00195226) srh-30 (WBGene00005253) T25F10.1 (WBGene00020805) clik-1 (WBGene00020808) bbs-8 (WBGene00000244) T25F10.4 (WBGene00020807) dbl-1 (WBGene00000936) T25F10.3 (WBGene00020806) grl-8 (WBGene00001717) grl-9 (WBGene00001718) ZC487.1 (WBGene00022623) ZC487.2 (WBGene00022624) srg-30 (WBGene00005187) sna-1 (WBGene00020951) dlst-1 (WBGene00020950) #22 W02F12.4 (WBGene00020949) era-1 (WBGene00020948) W02F12.2 (WBGene00020947) W02F12.8 (WBGene00175027) mtl-1 (WBGene00003473) K11G9.5 (WBGene00019655) egl-46 (WBGene00001210) cest-34 (WBGene00019652) cest-31 (WBGene00019653) cest-28 (WBGene00019654) str-180 (WBGene00006224) pmp-5 (WBGene00004062) #12 snb-1 (WBGene00004897) syx-18 (WBGene00020425) T10H9.8 (WBGene00044779) Fruitfly MODERN SPECIES 19 CG6689 (FBgn0037877) CG6693 (FBgn0037878) RpL3 (FBgn0020910) scpr-C (FBgn0037879) CG17726 (FBgn0037880) GCC88 (FBgn0037881) CG17187 (FBgn0037882) Dph3 (FBgn0037883) Arfip (FBgn0037884) CG17721 (FBgn0037885) CG31441 (FBgn0051441) CG31388 (FBgn0051388) scpr-B (FBgn0037888) scpr-A (FBgn0037889) CG17734 (FBgn0037890) CG5214 (FBgn0037891) #22 pros (FBgn0004595) #21 KP78b (FBgn0026063) KP78a (FBgn0026064) mRpL40 (FBgn0037892) mgr (FBgn0264694) Irbp (FBgn0011774) Ipo9 (FBgn0037894) bumpel (FBgn0037895) CG45676 (FBgn0267236) ninaG (FBgn0037896) CG5270 (FBgn0037897) Dtd (FBgn0037898) RpL24-like (FBgn0037899) CG5276 (FBgn0037900) Exd2 (FBgn0037901) Yeast MODERN SPECIES 3 CWC15 (YDR163W) NBP2 (YDR162C) ACL4 (YDR161W) SSY1 (YDR160W) SAC3 (YDR159W) HOM2 (YDR158W) YDR157W RPA14 (YDR156W) CPR1 (YDR155C) YDR154C ENT5 (YDR153C) GIR2 (YDR152W) CTH1 (YDR151C) NUM1 (YDR150W) YDR149C KGD2 (YDR148C) #22 EKI1 (YDR147W) SWI5 (YDR146C) TAF12 (YDR145W) MKC7 (YDR144C) SAN1 (YDR143C) PEX7 (YDR142C) DOP1 (YDR141C) MTQ2 (YDR140W) RUB1 (YDR139C) HPR1 (YDR138W) RGP1 (YDR137W) VPS61 (YDR136C) YCF1 (YDR135C) YDR133C YDR132C