Theria	ANCESTRAL SPECIES	13	ENSGT00940000162810	ENSGT00940000158524	ENSGT00390000013178	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447	ENSGT00940000162393	ENSGT00940000162300	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Boreoeutheria	ANCESTRAL SPECIES	15	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000162393	ENSGT00940000154447	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000162393	ENSGT00940000154447	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Primates	ANCESTRAL SPECIES	14	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162393.e	ENSGT00940000162300	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Haplorrhini	ANCESTRAL SPECIES	15	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000163728	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613.q #24	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711
Simiiformes	ANCESTRAL SPECIES	14	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e	ENSGT00940000162300.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613.q #24	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00910000146589 #31	ENSGT00910000147328 #30	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00910000147626	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00910000147328 #30	ENSGT00910000146589 #31	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000154783.e.a #15	ENSGT00390000010799.u.b.a.b.a.b ##16	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00910000147298 #26	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00910000147328 #30	ENSGT00910000146589 #31	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000154783.e.a #15	ENSGT00390000010799.u.b.a.b.a.b ##16	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00910000147328 #30	ENSGT00910000146589 #31	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000154783.e.a #15	ENSGT00390000010799.u.b.a.b.a.b ##16	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171.t ##21	ENSGT00940000157038 #22	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00910000147328 #30	ENSGT00910000146589 #31	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37
Cercopithecinae_b	ANCESTRAL SPECIES	15	ENSGT00940000153241.A.l.b	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00390000010799.u.b.a.b.a.b ##16	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171.s.a #21	ENSGT00940000157038 #22	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00910000147328 #30	ENSGT00910000146589 #31	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37
Cercopithecinae_d	ANCESTRAL SPECIES	136									ENSGT00940000155249.b #14	ENSGT00940000154783.e.a #15	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171.s.a #21	ENSGT00940000157038 #22	ENSGT00390000012818.o.a.a.a.a #23	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00910000147298 #26	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00910000147328 #30	ENSGT00910000146589 #31	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36
Sooty mangabey	MODERN SPECIES	123								ENSCATG00000012533 #14	ENSCATG00000013861 #15	ENSCATG00000039265 #16	SUCLG1 (ENSCATG00000033909) #17	DNAH6 (ENSCATG00000015755) #18	TRABD2A (ENSCATG00000034302) #19	TMSB10 (ENSCATG00000040005) #20	ENSCATG00000029438 #21	TCF7L1 (ENSCATG00000039504) #22	ENSCATG00000033790 #23	ENSCATG00000024477 #24	TGOLN2 (ENSCATG00000035819) #25	ENSCATG00000036711 #26	RETSAT (ENSCATG00000040068) #27	ELMOD3 (ENSCATG00000037573) #28	CAPG (ENSCATG00000035643) #29	ENSCATG00000037270 #30	ENSCATG00000039329 #31	MAT2A (ENSCATG00000004424) #32	GGCX (ENSCATG00000035800) #33	VAMP8 (ENSCATG00000029537) #34	RNF181 (ENSCATG00000033596) #35	TMEM150A (ENSCATG00000037683) #36	C2orf68 (ENSCATG00000034407) #37
Drill	MODERN SPECIES	1471															ENSMLEG00000019792 #23	TCF7L1 (ENSMLEG00000034494) #22	TGOLN2 (ENSMLEG00000032339) #25	ENSMLEG00000042086 #26	RETSAT (ENSMLEG00000035987) #27	ELMOD3 (ENSMLEG00000044317) #28	CAPG (ENSMLEG00000043889) #29	ENSMLEG00000033386 #30	ENSMLEG00000030069 #31	MAT2A (ENSMLEG00000028877) #32	GGCX (ENSMLEG00000029112) #33	VAMP8 (ENSMLEG00000036507) #34	VAMP5 (ENSMLEG00000036477)	RNF181 (ENSMLEG00000029338) #35	TMEM150A (ENSMLEG00000033025) #36	C2orf68 (ENSMLEG00000037933) #37	USP39 (ENSMLEG00000030185)
Olive baboon	MODERN SPECIES	5	CTNNA2 (ENSPANG00000024102)	LRRTM1 (ENSPANG00000014055)	ENSPANG00000050862	ENSPANG00000031580	ENSPANG00000049741	ENSPANG00000040341	ENSPANG00000039264	ENSPANG00000044148 ##15	ENSPANG00000044132	ENSPANG00000044948 ##16	SUCLG1 (ENSPANG00000018470) #17	DNAH6 (ENSPANG00000017584) #18	TRABD2A (ENSPANG00000026230) #19	TMSB10 (ENSPANG00000045803) #20	KCMF1 (ENSPANG00000007610) ##21	TCF7L1 (ENSPANG00000018548) #22	ENSPANG00000050077 #24	TGOLN2 (ENSPANG00000005831) #25	RETSAT (ENSPANG00000009008) #27	ELMOD3 (ENSPANG00000024547) #28	CAPG (ENSPANG00000000842) #29	ENSPANG00000004074	MAT2A (ENSPANG00000024065) #32	GGCX (ENSPANG00000020859) #33	VAMP8 (ENSPANG00000017285) #34	VAMP5 (ENSPANG00000016261)	RNF181 (ENSPANG00000024386) #35	TMEM150A (ENSPANG00000006521) #36	USP39 (ENSPANG00000017132)	C2orf68 (ENSPANG00000011060) #37	SFTPB (ENSPANG00000011084)
Macaca	DUPLICATION
Macaca	ANCESTRAL SPECIES	17	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000154783.e.a #15	ENSGT00390000010799.u.b.a.b.a.b ##16	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171.t ##21	ENSGT00940000157038.e #22	ENSGT00940000157038.f #22	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00910000147328 #30	ENSGT00910000146589 #31	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT01100000263493.a.b.a.b.b.b.a.a.a.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000161627.a.a.a.a.b.a.a.b.b.a.a	ENSGT00940000163007 #20	ENSGT00510000047171.t ##21	ENSGT00940000157038.e #22	ENSGT00940000157038.f #22	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992
Rhesus	MODERN SPECIES	4	REG1A (ENSMMUG00000040046)	REG3A (ENSMMUG00000062818)	ENSMMUG00000051034	LRRTM1 (ENSMMUG00000000291)	ENSMMUG00000055639	CTNNA2 (ENSMMUG00000000293)	ENSMMUG00000046169 #15	ENSMMUG00000059407	SUCLG1 (ENSMMUG00000000908) #17	DNAH6 (ENSMMUG00000019116) #18	TRABD2A (ENSMMUG00000008855) #19	ENSMMUG00000051834	TMSB10 (ENSMMUG00000056004) #20	ENSMMUG00000062644	KCMF1 (ENSMMUG00000001414) #21	TCF7L1 (ENSMMUG00000020134) #22	TGOLN2 (ENSMMUG00000019417) #25	RETSAT (ENSMMUG00000019416) #27	ELMOD3 (ENSMMUG00000002673) #28	CAPG (ENSMMUG00000002675) #29	SH2D6 (ENSMMUG00000009966)	MAT2A (ENSMMUG00000004450) #32	GGCX (ENSMMUG00000004446) #33	VAMP8 (ENSMMUG00000030785) #34	VAMP5 (ENSMMUG00000058122)	RNF181 (ENSMMUG00000063098) #35	TMEM150A (ENSMMUG00000062509) #36	C13H2orf68 (ENSMMUG00000050980) #37	ENSMMUG00000051721	USP39 (ENSMMUG00000017820)	SFTPB (ENSMMUG00000017818)
Crab-eating macaque	MODERN SPECIES	4	ENSMFAG00000049829	ENSMFAG00000054802	LRRTM1 (ENSMFAG00000023385)	CTNNA2 (ENSMFAG00000003995)	ENSMFAG00000058688	ENSMFAG00000062500	ENSMFAG00000050710	ENSMFAG00000050676	SUCLG1 (ENSMFAG00000043267) #17	DNAH6 (ENSMFAG00000038507) #18	TRABD2A (ENSMFAG00000042538) #19	ENSMFAG00000053884	ENSMFAG00000041894 #20	ENSMFAG00000063256	KCMF1 (ENSMFAG00000044887) ##21	TCF7L1 (ENSMFAG00000043006) #22	ENSMFAG00000057476 #22	ENSMFAG00000035638 #24	TGOLN2 (ENSMFAG00000002786) #25	RETSAT (ENSMFAG00000001631) #27	ELMOD3 (ENSMFAG00000032988) #28	ENSMFAG00000037110 #31	CAPG (ENSMFAG00000003357) #29	ENSMFAG00000002993	MAT2A (ENSMFAG00000002027) #32	GGCX (ENSMFAG00000045991) #33	VAMP8 (ENSMFAG00000034493) #34	VAMP5 (ENSMFAG00000009769)	RNF181 (ENSMFAG00000047260) #35	TMEM150A (ENSMFAG00000003805) #36	C2orf68 (ENSMFAG00000063159) #37
Pig-tailed macaque	MODERN SPECIES	341	ENSMNEG00000041460	REG1A (ENSMNEG00000045263)	ENSMNEG00000031141	REG3A (ENSMNEG00000038112)	CTNNA2 (ENSMNEG00000045240)	LRRTM1 (ENSMNEG00000004380)	ENSMNEG00000007123 #14	ENSMNEG00000042093 #15	ENSMNEG00000039109 ##16	SUCLG1 (ENSMNEG00000030675) #17	DNAH6 (ENSMNEG00000043693) #18	TRABD2A (ENSMNEG00000043453) #19	TMSB10 (ENSMNEG00000033093) #20	ENSMNEG00000011868 ##21	KCMF1 (ENSMNEG00000042627) ##21	TCF7L1 (ENSMNEG00000044913) #22	ENSMNEG00000017672 #23	ENSMNEG00000016717 #24	TGOLN2 (ENSMNEG00000034111) #25	RETSAT (ENSMNEG00000043728) #27	ELMOD3 (ENSMNEG00000035964) #28	CAPG (ENSMNEG00000045231) #29	ENSMNEG00000030307 #30	ENSMNEG00000042631 #31	MAT2A (ENSMNEG00000042382) #32	GGCX (ENSMNEG00000023012) #33	VAMP8 (ENSMNEG00000036220) #34	VAMP5 (ENSMNEG00000036172)	RNF181 (ENSMNEG00000040275) #35	TMEM150A (ENSMNEG00000014445) #36	C2orf68 (ENSMNEG00000043318) #37
Macaca	ANCESTRAL SPECIES	17	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000154783.e.a #15	ENSGT00390000010799.u.b.a.b.a.b ##16	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171.t ##21	ENSGT00940000157038.e #22	ENSGT00940000157038.f #22	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00910000147328 #30	ENSGT00910000146589 #31	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT01100000263493.a.b.a.b.b.b.a.a.a.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000161627.a.a.a.a.b.a.a.b.b.a.a	ENSGT00940000163007 #20	ENSGT00510000047171.t ##21	ENSGT00940000157038.e #22	ENSGT00940000157038.f #22	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711
Crab-eating macaque	MODERN SPECIES	4	ENSMFAG00000054802	LRRTM1 (ENSMFAG00000023385)	CTNNA2 (ENSMFAG00000003995)	ENSMFAG00000058688	ENSMFAG00000062500	ENSMFAG00000050710	ENSMFAG00000050676	SUCLG1 (ENSMFAG00000043267) #17	DNAH6 (ENSMFAG00000038507) #18	TRABD2A (ENSMFAG00000042538) #19	ENSMFAG00000053884	ENSMFAG00000041894 #20	ENSMFAG00000063256	KCMF1 (ENSMFAG00000044887) ##21	TCF7L1 (ENSMFAG00000043006) #22	ENSMFAG00000057476 #22	ENSMFAG00000035638 #24	TGOLN2 (ENSMFAG00000002786) #25	RETSAT (ENSMFAG00000001631) #27	ELMOD3 (ENSMFAG00000032988) #28	ENSMFAG00000037110 #31	CAPG (ENSMFAG00000003357) #29	ENSMFAG00000002993	MAT2A (ENSMFAG00000002027) #32	GGCX (ENSMFAG00000045991) #33	VAMP8 (ENSMFAG00000034493) #34	VAMP5 (ENSMFAG00000009769)	RNF181 (ENSMFAG00000047260) #35	TMEM150A (ENSMFAG00000003805) #36	C2orf68 (ENSMFAG00000063159) #37	USP39 (ENSMFAG00000041090)
Vervet Monkey	MODERN SPECIES	5	GCFC2 (ENSCSAG00000015854)	ENSCSAG00000019437	LRRTM4 (ENSCSAG00000015859)	REG1B (ENSCSAG00000015863)	ENSCSAG00000015868	REG1A (ENSCSAG00000015871)	REG3A (ENSCSAG00000015875)	ENSCSAG00000015880	LRRTM1 (ENSCSAG00000019436)	CTNNA2 (ENSCSAG00000015885)	SUCLG1 (ENSCSAG00000015890) #17	DNAH6 (ENSCSAG00000015982) #18	TRABD2A (ENSCSAG00000016047) #19	ENSCSAG00000016057	ENSCSAG00000019435	TCF7L1 (ENSCSAG00000016081) #22	TGOLN2 (ENSCSAG00000016094) #25	RETSAT (ENSCSAG00000016104) #27	ELMOD3 (ENSCSAG00000016108) #28	CAPG (ENSCSAG00000016141) #29	ENSCSAG00000016162	MAT2A (ENSCSAG00000016171) #32	GGCX (ENSCSAG00000016185) #33	VAMP8 (ENSCSAG00000016190) #34	VAMP5 (ENSCSAG00000016193)	RNF181 (ENSCSAG00000016198) #35	TMEM150A (ENSCSAG00000016204) #36	C2orf68 (ENSCSAG00000016209) #37	USP39 (ENSCSAG00000016215)	SFTPB (ENSCSAG00000016227)	ENSCSAG00000016230
Rhinopithecus	ANCESTRAL SPECIES	545									ENSGT00940000154783.e.a #15	ENSGT00390000010799.u.b.a.b.a.b ##16	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00390000012818.o.a.a.a.a.cb #23
Golden snub-nosed monkey	MODERN SPECIES	846													TRABD2A (ENSRROG00000045109) #19	ENSRROG00000036693	KCMF1 (ENSRROG00000006457) #21	TCF7L1 (ENSRROG00000029668) #22	ENSRROG00000031357 #23
Black snub-nosed monkey	MODERN SPECIES	1116								ENSRBIG00000011175 #15	ENSRBIG00000034443	SUCLG1 (ENSRBIG00000000039) #17	DNAH6 (ENSRBIG00000035970) #18	TRABD2A (ENSRBIG00000036910) #19	TMSB10 (ENSRBIG00000043537) #20	KCMF1 (ENSRBIG00000043608) #21	ENSRBIG00000033867 #23	TCF7L1 (ENSRBIG00000029810) #22
Hominoidea	ANCESTRAL SPECIES	18	ENSGT00940000154909	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000153201.j.k.a.a.a.b.b.a	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00390000012818.o.a.a.b ##23	ENSGT00910000147626	ENSGT00910000147298 #26	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00910000147328 #30	ENSGT00910000146589 #31	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371
Hominidae	ANCESTRAL SPECIES	19	ENSGT00940000154909	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000153201.j.k.a.a.a.b.b.a	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00390000012818.o.a.a.b ##23	ENSGT00910000147626	ENSGT00910000147298 #26	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	18	ENSGT00940000154909	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000154783.e.a #15	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000153201.j.k.a.a.a.b.b.a	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00390000012818.o.a.a.b ##23	ENSGT00910000147626	ENSGT00910000147298 #26	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371.e	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36
Gorilla	MODERN SPECIES	14	GCFC2 (ENSGGOG00000025320)	LRRTM4 (ENSGGOG00000008587)	REG3G (ENSGGOG00000011782)	REG1B (ENSGGOG00000003112)	REG1A (ENSGGOG00000004968)	REG3A (ENSGGOG00000011544)	ENSGGOG00000023594	LRRTM1 (ENSGGOG00000001604)	CTNNA2 (ENSGGOG00000010490)	ENSGGOG00000014682 #15	SUCLG1 (ENSGGOG00000002034) #17	DNAH6 (ENSGGOG00000004030) #18	TRABD2A (ENSGGOG00000004046) #19	KCMF1 (ENSGGOG00000009501) #21	ENSGGOG00000036864	TCF7L1 (ENSGGOG00000008549) #22	ENSGGOG00000039072 #24	ENSGGOG00000038515 #26	ENSGGOG00000036619	TGOLN2 (ENSGGOG00000000713) #25	ENSGGOG00000043575	RETSAT (ENSGGOG00000008852) #27	ELMOD3 (ENSGGOG00000026185) #28	CAPG (ENSGGOG00000011604) #29	ENSGGOG00000001052	MAT2A (ENSGGOG00000004936) #32	GGCX (ENSGGOG00000004940) #33	ENSGGOG00000004945	VAMP5 (ENSGGOG00000004951)	RNF181 (ENSGGOG00000004953) #35	TMEM150A (ENSGGOG00000004955) #36
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00940000154909	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000154783.e.a #15	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000153201.j.k.a.a.a.b.b.a	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00390000012818.o.a.a.b ##23	ENSGT00910000147626	ENSGT00910000147298 #26	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371.e	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36
Human	MODERN SPECIES	11	EVA1A (ENSG00000115363)	MRPL19 (ENSG00000115364)	GCFC2 (ENSG00000005436)	LRRTM4 (ENSG00000176204)	REG3G (ENSG00000143954)	REG1B (ENSG00000172023)	REG1A (ENSG00000115386)	REG3A (ENSG00000172016)	CTNNA2 (ENSG00000066032)	LRRTM1 (ENSG00000162951)	SUCLG1 (ENSG00000163541) #17	DNAH6 (ENSG00000115423) #18	TRABD2A (ENSG00000186854) #19	TMSB10 (ENSG00000034510) #20	KCMF1 (ENSG00000176407) #21	TCF7L1 (ENSG00000152284) #22	TGOLN2 (ENSG00000152291) #25	RETSAT (ENSG00000042445) #27	ELMOD3 (ENSG00000115459) #28	CAPG (ENSG00000042493) #29	SH2D6 (ENSG00000152292)	MAT2A (ENSG00000168906) #32	GGCX (ENSG00000115486) #33	VAMP8 (ENSG00000118640) #34	VAMP5 (ENSG00000168899)	RNF181 (ENSG00000168894) #35	TMEM150A (ENSG00000168890) #36	USP39 (ENSG00000168883)	C2orf68 (ENSG00000168887) #37	SFTPB (ENSG00000168878)	GNLY (ENSG00000115523)
Pan	ANCESTRAL SPECIES	17	ENSGT00940000162393.e	ENSGT00940000163728.b	ENSGT00940000162300.b	ENSGT01030000234543.A.a	ENSGT00910000147841	ENSGT00870000136493.d.h	ENSGT00940000161705	ENSGT00940000154783.e.a #15	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000153201.j.k.a.a.a.b.b.a	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.a.a.b	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00390000012818.o.a.a.b ##23	ENSGT00910000147626	ENSGT00910000147298 #26	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a.s #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371.e	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36
Chimpanzee	MODERN SPECIES	14	ENSPTRG00000049611	REG3A (ENSPTRG00000012116)	CTNNA2 (ENSPTRG00000049489)	ENSPTRG00000044202	ENSPTRG00000049329	LRRTM1 (ENSPTRG00000012118)	ENSPTRG00000046679 #15	SUCLG1 (ENSPTRG00000012121) #17	DNAH6 (ENSPTRG00000012125) #18	ENSPTRG00000043159	TRABD2A (ENSPTRG00000012126) #19	TMSB10 (ENSPTRG00000030440) #20	ENSPTRG00000050569	KCMF1 (ENSPTRG00000012127) #21	ENSPTRG00000050127	TCF7L1 (ENSPTRG00000012128) #22	ENSPTRG00000044898 ##23	ENSPTRG00000050133 #24	TGOLN2 (ENSPTRG00000012129) #25	ENSPTRG00000044302	ENSPTRG00000048519 #26	ENSPTRG00000051234	RETSAT (ENSPTRG00000012130) #27	ELMOD3 (ENSPTRG00000012131) #28	CAPG (ENSPTRG00000012132) #29	SH2D6 (ENSPTRG00000012133)	MAT2A (ENSPTRG00000012134) #32	GGCX (ENSPTRG00000012135) #33	VAMP8 (ENSPTRG00000012136)	VAMP5 (ENSPTRG00000012137)	RNF181 (ENSPTRG00000012138) #35
Bonobo	MODERN SPECIES	14	REG1A (ENSPPAG00000041956)	ENSPPAG00000036667	REG3A (ENSPPAG00000022156)	CTNNA2 (ENSPPAG00000040375)	ENSPPAG00000012586	ENSPPAG00000029108	LRRTM1 (ENSPPAG00000003510)	ENSPPAG00000034840 #15	SUCLG1 (ENSPPAG00000030548) #17	DNAH6 (ENSPPAG00000034680) #18	ENSPPAG00000038936	TRABD2A (ENSPPAG00000039836) #19	TMSB10 (ENSPPAG00000012732) #20	ENSPPAG00000037652	KCMF1 (ENSPPAG00000031415) #21	TCF7L1 (ENSPPAG00000030803) #22	ENSPPAG00000035809 ##23	ENSPPAG00000036633	ENSPPAG00000041446	ENSPPAG00000043071 #26	ENSPPAG00000032707 #25	RETSAT (ENSPPAG00000031643) #27	ELMOD3 (ENSPPAG00000027146) #28	CAPG (ENSPPAG00000035666) #29	ENSPPAG00000037603	MAT2A (ENSPPAG00000041128) #32	GGCX (ENSPPAG00000031307) #33	VAMP8 (ENSPPAG00000031084) #34	VAMP5 (ENSPPAG00000031044)	RNF181 (ENSPPAG00000031062) #35	TMEM150A (ENSPPAG00000029677) #36
Orangutan	MODERN SPECIES	14	LRRTM4 (ENSPPYG00000012253)	REG3G (ENSPPYG00000012248)	REG1B (ENSPPYG00000035565)	ENSPPYG00000038327	REG1A (ENSPPYG00000034399)	REG3A (ENSPPYG00000012251)	LRRTM1 (ENSPPYG00000012246)	CTNNA2 (ENSPPYG00000012245)	ENSPPYG00000012243 #15	SUCLG1 (ENSPPYG00000040003) #17	ENSPPYG00000039253	DNAH6 (ENSPPYG00000012240) #18	TRABD2A (ENSPPYG00000012239) #19	TMSB10 (ENSPPYG00000030623) #20	KCMF1 (ENSPPYG00000012235) #21	TCF7L1 (ENSPPYG00000012234) #22	TGOLN2 (ENSPPYG00000012712) #25	RETSAT (ENSPPYG00000012233) #27	ELMOD3 (ENSPPYG00000012232) #28	CAPG (ENSPPYG00000012231) #29	SH2D6 (ENSPPYG00000012230)	MAT2A (ENSPPYG00000012229) #32	GGCX (ENSPPYG00000012228) #33	VAMP8 (ENSPPYG00000012227) #34	VAMP5 (ENSPPYG00000036939)	RNF181 (ENSPPYG00000012225) #35	TMEM150A (ENSPPYG00000034938) #36	C2orf68 (ENSPPYG00000035994) #37	USP39 (ENSPPYG00000012222)	SFTPB (ENSPPYG00000012221)	ENSPPYG00000012220
Gibbon	MODERN SPECIES	4	ENSNLEG00000032694	LRRTM4 (ENSNLEG00000001198)	ENSNLEG00000035977	ENSNLEG00000032509	REG3G (ENSNLEG00000001205)	REG3A (ENSNLEG00000001228)	ENSNLEG00000031764	CTNNA2 (ENSNLEG00000001259)	ENSNLEG00000028214	ENSNLEG00000031099	ENSNLEG00000029568 #15	DNAH6 (ENSNLEG00000001321) #18	ENSNLEG00000034028	TRABD2A (ENSNLEG00000001389) #19	KCMF1 (ENSNLEG00000001418) #21	TCF7L1 (ENSNLEG00000001462) #22	ENSNLEG00000028501 ##23	ENSNLEG00000032991	ENSNLEG00000035166 #26	TGOLN2 (ENSNLEG00000001482) #25	ENSNLEG00000001496	RETSAT (ENSNLEG00000001497) #27	ENSNLEG00000001571 #28	CAPG (ENSNLEG00000001666) #29	ENSNLEG00000028749 #30	ENSNLEG00000001807 #31	MAT2A (ENSNLEG00000001767) #32	GGCX (ENSNLEG00000001826) #33	ENSNLEG00000002000	VAMP5 (ENSNLEG00000030799)	RNF181 (ENSNLEG00000030284) #35
Platyrrhini	ANCESTRAL SPECIES	13	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e.a	ENSGT00940000162300.b	ENSGT00910000147841	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00390000017613.q #24	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305.g #29	ENSGT00910000146589 #31	ENSGT00910000147328 #30	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37
Cebidae	ANCESTRAL SPECIES	15	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300.a	ENSGT00940000163728.a	ENSGT00940000162393.f	ENSGT00940000162393.e.a	ENSGT00940000162300.b	ENSGT01030000234543.A.a	ENSGT00910000147841	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305.g #29	ENSGT00910000146589 #31	ENSGT00910000147328 #30	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552.e.a #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992.t
Cebidae_a	ANCESTRAL SPECIES	91										ENSGT00940000156351 #17	ENSGT00390000017955.c.q.b	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305.g #29	ENSGT00910000146589 #31	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552.e.a #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992.t	ENSGT00940000161711	ENSGT00390000002975
Capuchin	MODERN SPECIES	651																TCF7L1 (ENSCCAG00000015290) #22	SNRPC (ENSCCAG00000028293)	ENSCCAG00000021530 #24	TGOLN2 (ENSCCAG00000026086) #25	RETSAT (ENSCCAG00000033378) #27	ELMOD3 (ENSCCAG00000019649) #28	ENSCCAG00000029318 #29	ENSCCAG00000028615 #30	ENSCCAG00000021850	ENSCCAG00000011821	MAT2A (ENSCCAG00000020027) #32	GGCX (ENSCCAG00000029602) #33	VAMP8 (ENSCCAG00000027515) #34	VAMP5 (ENSCCAG00000036984)	ENSCCAG00000025694 #35	TMEM150A (ENSCCAG00000019691) #36
Bolivian squirrel monkey	MODERN SPECIES	196									SUCLG1 (ENSSBOG00000025277) #17	ENSSBOG00000024959	DNAH6 (ENSSBOG00000027150) #18	ENSSBOG00000026272	TRABD2A (ENSSBOG00000021372) #19	TMSB10 (ENSSBOG00000024439) #20	KCMF1 (ENSSBOG00000028450) #21	TCF7L1 (ENSSBOG00000024977) #22	ENSSBOG00000029932 #25	RETSAT (ENSSBOG00000027110) #27	ELMOD3 (ENSSBOG00000026015) #28	CAPG (ENSSBOG00000026620) #29	ENSSBOG00000004955 #31	ENSSBOG00000020245 #32	ENSSBOG00000024413 #33	VAMP8 (ENSSBOG00000025099) #34	VAMP5 (ENSSBOG00000023652)	RNF181 (ENSSBOG00000025972) #35	TMEM150A (ENSSBOG00000030498) #36	C2orf68 (ENSSBOG00000032799) #37	USP39 (ENSSBOG00000031347)	SFTPB (ENSSBOG00000033848)
Marmoset	MODERN SPECIES	5	ENSCJAG00000061676	ENSCJAG00000074605	LRRTM1 (ENSCJAG00000065289)	CTNNA2 (ENSCJAG00000017015)	ENSCJAG00000079286	ENSCJAG00000022822	ENSCJAG00000017000	ENSCJAG00000073910	SUCLG1 (ENSCJAG00000019805) #17	DNAH6 (ENSCJAG00000019742) #18	TRABD2A (ENSCJAG00000019738) #19	TMSB10 (ENSCJAG00000086618) #20	ENSCJAG00000082255	ENSCJAG00000072028	KCMF1 (ENSCJAG00000019735) #21	TCF7L1 (ENSCJAG00000039504) #22	RETSAT (ENSCJAG00000019726) #27	ELMOD3 (ENSCJAG00000019718) #28	CAPG (ENSCJAG00000041726) #29	SH2D6 (ENSCJAG00000019695)	MAT2A (ENSCJAG00000019681) #32	GGCX (ENSCJAG00000019657) #33	VAMP8 (ENSCJAG00000046213) #34	VAMP5 (ENSCJAG00000019651)	ENSCJAG00000019647 #35	TMEM150A (ENSCJAG00000019638) #36	C2orf68 (ENSCJAG00000019632) #37	USP39 (ENSCJAG00000019594)	SFTPB (ENSCJAG00000019581)	ENSCJAG00000071875	GNLY (ENSCJAG00000065652)
Mas night monkey	MODERN SPECIES	1187												TMSB10 (ENSANAG00000020259) #20	ENSANAG00000030949	ENSANAG00000030934	KCMF1 (ENSANAG00000025124) #21	TCF7L1 (ENSANAG00000021621) #22	ENSANAG00000020918 #24	TGOLN2 (ENSANAG00000019615) #25	RETSAT (ENSANAG00000021579) #27
Tarsier	MODERN SPECIES	5553																TCF7L1 (ENSTSYG00000025985) #22	ENSTSYG00000005171 #25
Strepsirrhini	ANCESTRAL SPECIES	13	ENSGT00950000182787.C	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000163728	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901.o.a #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Bushbaby	MODERN SPECIES	262												SUCLG1 (ENSOGAG00000004142) #17	DNAH6 (ENSOGAG00000011781) #18	ENSOGAG00000002147 #20	KCMF1 (ENSOGAG00000034863) #21	TCF7L1 (ENSOGAG00000001078) #22	ENSOGAG00000032714 #25	RETSAT (ENSOGAG00000001079) #27	ELMOD3 (ENSOGAG00000001081) #28	CAPG (ENSOGAG00000001084) #29	MAT2A (ENSOGAG00000026925) #32	GGCX (ENSOGAG00000010470) #33	VAMP8 (ENSOGAG00000012281) #34	VAMP5 (ENSOGAG00000012283)	RNF181 (ENSOGAG00000012284) #35	TMEM150A (ENSOGAG00000012288) #36	C2orf68 (ENSOGAG00000033817) #37	USP39 (ENSOGAG00000012291)	SFTPB (ENSOGAG00000012294)	ATOH8 (ENSOGAG00000025987)	ST3GAL5 (ENSOGAG00000016459)
Lemuriformes	ANCESTRAL SPECIES	19	ENSGT00950000182787.C	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000163728	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901.o.a #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Lemuriformes_a	ANCESTRAL SPECIES	36												ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00910000147626	ENSGT00390000017613.r #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901.o.a #37	ENSGT00390000007992	ENSGT00940000161711
Greater bamboo lemur	MODERN SPECIES	581												ENSPSMG00000010502	SUCLG1 (ENSPSMG00000010486) #17	DNAH6 (ENSPSMG00000010464) #18	TMSB10 (ENSPSMG00000010397) #20	TCF7L1 (ENSPSMG00000010393) #22	ENSPSMG00000010380 #25	ENSPSMG00000010379	RETSAT (ENSPSMG00000010364) #27	ELMOD3 (ENSPSMG00000010313) #28	CAPG (ENSPSMG00000010233) #29	ENSPSMG00000010207
Coquerels sifaka	MODERN SPECIES	300												ENSPCOG00000012720 #17	DNAH6 (ENSPCOG00000021699) #18	TMSB10 (ENSPCOG00000020577) #20	KCMF1 (ENSPCOG00000024804) #21	TCF7L1 (ENSPCOG00000027574) #22	RETSAT (ENSPCOG00000018203) #27	ELMOD3 (ENSPCOG00000016503) #28	CAPG (ENSPCOG00000017087) #29	ENSPCOG00000027552	MAT2A (ENSPCOG00000013199) #32	GGCX (ENSPCOG00000017501) #33	VAMP8 (ENSPCOG00000025762) #34	VAMP5 (ENSPCOG00000008979)	RNF181 (ENSPCOG00000019878) #35	TMEM150A (ENSPCOG00000019283) #36	C2orf68 (ENSPCOG00000017415) #37	USP39 (ENSPCOG00000018540)	ENSPCOG00000027418	ATOH8 (ENSPCOG00000022872)	ST3GAL5 (ENSPCOG00000028704)
Mouse lemur	MODERN SPECIES	26	GCFC2 (ENSMICG00000028998)	LRRTM4 (ENSMICG00000010898)	ENSMICG00000042938	ENSMICG00000004912	ENSMICG00000004914	ENSMICG00000045520	ENSMICG00000047387	CTNNA2 (ENSMICG00000001476)	LRRTM1 (ENSMICG00000038543)	SUCLG1 (ENSMICG00000005754) #17	DNAH6 (ENSMICG00000015331) #18	ENSMICG00000035690	ENSMICG00000015388 #19	TMSB10 (ENSMICG00000047627) #20	KCMF1 (ENSMICG00000046646) #21	TCF7L1 (ENSMICG00000016146) #22	ENSMICG00000041852 #25	RETSAT (ENSMICG00000016157) #27	ELMOD3 (ENSMICG00000014497) #28	CAPG (ENSMICG00000015066) #29	ENSMICG00000015081	MAT2A (ENSMICG00000011458) #32	GGCX (ENSMICG00000011475) #33	ENSMICG00000035021 #34	VAMP5 (ENSMICG00000011486)	RNF181 (ENSMICG00000011489) #35	TMEM150A (ENSMICG00000026572) #36	C2orf68 (ENSMICG00000044296) #37	USP39 (ENSMICG00000011500)	SFTPB (ENSMICG00000011514)	ATOH8 (ENSMICG00000007934)
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000162393	ENSGT00940000154447	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Glires	ANCESTRAL SPECIES	13	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000162393	ENSGT00940000154447	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Lagomorpha	ANCESTRAL SPECIES	47	ENSGT00950000182787.C	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154447.`b	ENSGT00940000162393	ENSGT00940000154447.ab	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00910000146589 #31	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Pika	MODERN SPECIES	2775																TCF7L1 (ENSOPRG00000014672) #22	RETSAT (ENSOPRG00000014695) #27	ELMOD3 (ENSOPRG00000014718) #28	CAPG (ENSOPRG00000014744) #29
Rabbit	MODERN SPECIES	11	ENSOCUG00000030492	LRRTM1 (ENSOCUG00000005244)	ENSOCUG00000035825	CTNNA2 (ENSOCUG00000029576)	ENSOCUG00000027129	ENSOCUG00000006135	ENSOCUG00000023783 #35	SUCLG1 (ENSOCUG00000003780) #17	ENSOCUG00000032531	ENSOCUG00000031742	DNAH6 (ENSOCUG00000010057) #18	TMSB10 (ENSOCUG00000017506) #20	TRABD2A (ENSOCUG00000010075) #19	ENSOCUG00000035044 #21	ENSOCUG00000002533 #21	TCF7L1 (ENSOCUG00000008749) #22	ENSOCUG00000008764 #25	RETSAT (ENSOCUG00000026865) #27	ELMOD3 (ENSOCUG00000002332) #28	CAPG (ENSOCUG00000002341) #29	ENSOCUG00000039138 #31	MAT2A (ENSOCUG00000002361) #32	GGCX (ENSOCUG00000002368) #33	VAMP8 (ENSOCUG00000002375) #34	VAMP5 (ENSOCUG00000025906)	ENSOCUG00000007951 #35	TMEM150A (ENSOCUG00000007956) #36	ENSOCUG00000010066 #37	USP39 (ENSOCUG00000010070)	ENSOCUG00000020733	ATOH8 (ENSOCUG00000003528)
Rodentia	ANCESTRAL SPECIES	15	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447.z	ENSGT00940000162300	ENSGT00940000162393	ENSGT00940000154447.y.a	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000162393	ENSGT00940000154447.z	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171.n #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Hystricomorpha	ANCESTRAL SPECIES	8	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447.z.e.b	ENSGT00940000154447.z.e.a	ENSGT00940000154447.z.f	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171.n #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Hystricomorpha_a	ANCESTRAL SPECIES	35	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447.z.e.b	ENSGT00940000154447.z.e.a	ENSGT00940000154447.z.f	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171.n #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Hystricomorpha_b	ANCESTRAL SPECIES	33	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447.z.e.b	ENSGT00940000154447.z.e.a	ENSGT00940000154447.z.f	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171.n #21	ENSGT00940000157038 #22	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151	ENSGT00940000157929
Degu	MODERN SPECIES	203										ENSODEG00000002222	ENSODEG00000002212	SUCLG1 (ENSODEG00000002195) #17	DNAH6 (ENSODEG00000003756) #18	ENSODEG00000003596 #20	ENSODEG00000003586 #21	TCF7L1 (ENSODEG00000003559) #22	RETSAT (ENSODEG00000003469) #27	ELMOD3 (ENSODEG00000003393) #28	CAPG (ENSODEG00000003321) #29	ENSODEG00000018929	SH2D6 (ENSODEG00000003239)	ENSODEG00000003186 #32	GGCX (ENSODEG00000003141) #33	VAMP8 (ENSODEG00000003107) #34	VAMP5 (ENSODEG00000003093)	RNF181 (ENSODEG00000003046) #35	TMEM150A (ENSODEG00000003753) #36	C2orf68 (ENSODEG00000003734) #37	USP39 (ENSODEG00000003717)	SFTPB (ENSODEG00000003695)	ATOH8 (ENSODEG00000003670)
Long-tailed chinchilla	MODERN SPECIES	131	EVA1A (ENSCLAG00000004417)	MRPL19 (ENSCLAG00000016582)	GCFC2 (ENSCLAG00000012347)	LRRTM4 (ENSCLAG00000007091)	ENSCLAG00000006062	ENSCLAG00000005804	ENSCLAG00000006327	ENSCLAG00000005858	LRRTM1 (ENSCLAG00000005364)	CTNNA2 (ENSCLAG00000013755)	ENSCLAG00000009325	SUCLG1 (ENSCLAG00000008580) #17	DNAH6 (ENSCLAG00000006035) #18	TMSB10 (ENSCLAG00000010365) #20	KCMF1 (ENSCLAG00000009986) #21	TCF7L1 (ENSCLAG00000007414) #22	RETSAT (ENSCLAG00000008939) #27	ELMOD3 (ENSCLAG00000009003) #28	CAPG (ENSCLAG00000004481) #29	ENSCLAG00000006141	MAT2A (ENSCLAG00000007205) #32	GGCX (ENSCLAG00000005838) #33	VAMP8 (ENSCLAG00000008880) #34	VAMP5 (ENSCLAG00000009915)	RNF181 (ENSCLAG00000006082) #35	TMEM150A (ENSCLAG00000005500) #36	C2orf68 (ENSCLAG00000009438) #37	USP39 (ENSCLAG00000006866)	SFTPB (ENSCLAG00000006471)	ATOH8 (ENSCLAG00000006142)	ST3GAL5 (ENSCLAG00000006950)
Guinea pig	MODERN SPECIES	37	POLE4 (ENSCPOG00000036220)	TACR1 (ENSCPOG00000036008)	EVA1A (ENSCPOG00000031202)	MRPL19 (ENSCPOG00000024548)	GCFC2 (ENSCPOG00000002225)	LRRTM4 (ENSCPOG00000012033)	ENSCPOG00000020711	ENSCPOG00000014439	ENSCPOG00000004885	ENSCPOG00000032214	LRRTM1 (ENSCPOG00000001371)	CTNNA2 (ENSCPOG00000023564)	SUCLG1 (ENSCPOG00000003017) #17	DNAH6 (ENSCPOG00000015041) #18	KCMF1 (ENSCPOG00000023050) #21	TCF7L1 (ENSCPOG00000014492) #22	ENSCPOG00000037555 #25	RETSAT (ENSCPOG00000022640) #27	ELMOD3 (ENSCPOG00000007973) #28	CAPG (ENSCPOG00000007978) #29	ENSCPOG00000012229	MAT2A (ENSCPOG00000001533) #32	GGCX (ENSCPOG00000001534) #33	VAMP8 (ENSCPOG00000001409) #34	VAMP5 (ENSCPOG00000021802)	RNF181 (ENSCPOG00000001938) #35	TMEM150A (ENSCPOG00000025516) #36	C2orf68 (ENSCPOG00000009311) #37	USP39 (ENSCPOG00000009315)	SFTPB (ENSCPOG00000035291)	ATOH8 (ENSCPOG00000006364)
Naked mole-rat female	MODERN SPECIES	23	ENSHGLG00000008059	ENSHGLG00000007734	ENSHGLG00000007074	ENSHGLG00000005143	ENSHGLG00000045424	ENSHGLG00000021375	ENSHGLG00000050728	ENSHGLG00000016889	ENSHGLG00000016878	ENSHGLG00000020983	SUCLG1 (ENSHGLG00000047475) #17	ENSHGLG00000016621 #18	ENSHGLG00000039609 #20	ENSHGLG00000036565 #21	ENSHGLG00000049290	TCF7L1 (ENSHGLG00000044140) #22	ENSHGLG00000007230 #25	RETSAT (ENSHGLG00000009788) #27	ENSHGLG00000005816 #28	ENSHGLG00000043435	CAPG (ENSHGLG00000004995) #29	SH2D6 (ENSHGLG00000016223)	MAT2A (ENSHGLG00000018376) #32	GGCX (ENSHGLG00000013929) #33	VAMP8 (ENSHGLG00000012997) #34	ENSHGLG00000012613	RNF181 (ENSHGLG00000045564) #35	TMEM150A (ENSHGLG00000010994) #36	C2orf68 (ENSHGLG00000036696) #37	USP39 (ENSHGLG00000015846)	SFTPB (ENSHGLG00000016430)
Sciuridae	ANCESTRAL SPECIES	53														ENSGT00940000163478	ENSGT00390000004352	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Marmotini	ANCESTRAL SPECIES	86													ENSGT00940000163478	ENSGT00390000004352	ENSGT00940000153165.a.a.c.a.i.b.b.b.a.a	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Marmotini_b	ANCESTRAL SPECIES	128													ENSGT00940000163478	ENSGT00390000004352	ENSGT00940000153165.a.a.c.a.i.b.b.b.a.a	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000154129.m.r.b
Arctic ground squirrel	MODERN SPECIES	609													IGKC (ENSUPAG00010018047)	RPIA (ENSUPAG00010018051)	ENSUPAG00010018060	TCF7L1 (ENSUPAG00010018088) #22	ENSUPAG00010018102 #25	RETSAT (ENSUPAG00010018105) #27	ELMOD3 (ENSUPAG00010018158) #28	CAPG (ENSUPAG00010018187) #29	SH2D6 (ENSUPAG00010018214)	MAT2A (ENSUPAG00010000075) #32	GGCX (ENSUPAG00010000144) #33	VAMP8 (ENSUPAG00010000178) #34	ENSUPAG00010000192	TMEM150A (ENSUPAG00010000226) #36	RNF181 (ENSUPAG00010000242) #35	ENSUPAG00010000260 #37	USP39 (ENSUPAG00010000286)	SFTPB (ENSUPAG00010000319)	ENSUPAG00010000360
Squirrel	MODERN SPECIES	312													RPIA (ENSSTOG00000023312)	ENSSTOG00000034297	ENSSTOG00000031036	TCF7L1 (ENSSTOG00000021988) #22	ENSSTOG00000020177 #25	RETSAT (ENSSTOG00000026131) #27	ELMOD3 (ENSSTOG00000009420) #28	CAPG (ENSSTOG00000009431) #29	ENSSTOG00000010788	MAT2A (ENSSTOG00000010796) #32	GGCX (ENSSTOG00000010797) #33	VAMP8 (ENSSTOG00000005962) #34	VAMP5 (ENSSTOG00000005966)	RNF181 (ENSSTOG00000005973) #35	TMEM150A (ENSSTOG00000023355) #36	C2orf68 (ENSSTOG00000032886) #37	USP39 (ENSSTOG00000015986)	SFTPB (ENSSTOG00000026197)	ENSSTOG00000033478
Alpin marmot	MODERN SPECIES	118						ENSMMMG00000006958	ENSMMMG00000006993	ENSMMMG00000007004	ENSMMMG00000007007	ENSMMMG00000007012	ENSMMMG00000007026	RPIA (ENSMMMG00000007477)	ENSMMMG00000007572	ENSMMMG00000007617	ENSMMMG00000007627	TCF7L1 (ENSMMMG00000007633) #22	ENSMMMG00000007682 #25	RETSAT (ENSMMMG00000007689) #27	ENSMMMG00000007785 #28	CAPG (ENSMMMG00000007822) #29	ENSMMMG00000007857	MAT2A (ENSMMMG00000007871) #32	GGCX (ENSMMMG00000008142) #33	VAMP8 (ENSMMMG00000008162) #34	VAMP5 (ENSMMMG00000008168)	RNF181 (ENSMMMG00000008179) #35	TMEM150A (ENSMMMG00000008189) #36	USP39 (ENSMMMG00000008203)	ENSMMMG00000008853 #37	SFTPB (ENSMMMG00000008881)	ST3GAL5 (ENSMMMG00000008911)
Eurasian red squirrel	MODERN SPECIES	5	ENSSVLG00005019804	ENSSVLG00005019740	ENSSVLG00005019684	ENSSVLG00005019625	ENSSVLG00005019592	ENSSVLG00005019561	ENSSVLG00005019516	IGKC (ENSSVLG00005019486)	RPIA (ENSSVLG00005019426)	ENSSVLG00005019400	ENSSVLG00005019338	ENSSVLG00005019271	ENSSVLG00005018002	ENSSVLG00005017863	ENSSVLG00005017786	TCF7L1 (ENSSVLG00005017741) #22	ENSSVLG00005017693 #25	RETSAT (ENSSVLG00005017559) #27	ELMOD3 (ENSSVLG00005017414) #28	CAPG (ENSSVLG00005017210) #29	ENSSVLG00005017177	SH2D6 (ENSSVLG00005016979)	MAT2A (ENSSVLG00005016926) #32	ENSSVLG00005016868	GGCX (ENSSVLG00005016698) #33	VAMP8 (ENSSVLG00005016627) #34	VAMP5 (ENSSVLG00005016585)	RNF181 (ENSSVLG00005016555) #35	TMEM150A (ENSSVLG00005016477) #36	ENSSVLG00005016431 #37	USP39 (ENSSVLG00005016257)
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447.y.a	ENSGT00940000162393	ENSGT00940000162300	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Kangaroo rat	MODERN SPECIES	528												Suclg1 (ENSDORG00000010991) #17	Dnah6 (ENSDORG00000000400) #18	Tmsb10b (ENSDORG00000025129) #20	Kcmf1 (ENSDORG00000029229) #21	Tcf7l1 (ENSDORG00000013753) #22	Retsat (ENSDORG00000009720) #27	Elmod3 (ENSDORG00000009721) #28	Capg (ENSDORG00000009722) #29	Sh2d6 (ENSDORG00000013882)	Mat2a (ENSDORG00000011312) #32	Ggcx (ENSDORG00000006726) #33	Vamp8 (ENSDORG00000010738) #34	Vamp5 (ENSDORG00000027327)	ENSDORG00000010740 #35	Tmem150a (ENSDORG00000010742) #36	0610030E20Rik (ENSDORG00000030143) #37	Usp39 (ENSDORG00000010746)	Sftpb (ENSDORG00000010751)	Atoh8 (ENSDORG00000028892)	St3gal5 (ENSDORG00000008296)
Myomorpha	ANCESTRAL SPECIES	37	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447.y.a.a	ENSGT00940000162393	ENSGT00940000162300	ENSGT00940000154447.y.a.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Muroidea	ANCESTRAL SPECIES	38	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447.y.a.a	ENSGT00940000162393	ENSGT00940000162300	ENSGT00940000154447.y.b.b	ENSGT00940000154447.y.b.a	ENSGT00940000154447.y.a.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00940000154909	ENSGT00940000154447.y.a.a	ENSGT00940000162393.a	ENSGT00940000162393.b	ENSGT00940000162300	ENSGT00940000154447.y.b.b	ENSGT00940000154447.y.b.a	ENSGT00940000154447.y.a.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00390000018097.j	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000154909	ENSGT00940000154447.y.a.a	ENSGT00940000162393.a	ENSGT00940000162393.b	ENSGT00940000162300	ENSGT00940000154447.y.b.b	ENSGT00940000154447.y.b.a	ENSGT00940000154447.y.a.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00390000018097.j	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909.g #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447.y.a.a	ENSGT00940000162393.b	ENSGT00940000154447.y.b.b	ENSGT00940000154447.y.b.a	ENSGT00940000154447.y.a.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00390000018097.j	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909.g #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Prairie vole	MODERN SPECIES	83	ENSMOCG00000000151	Lrrtm4 (ENSMOCG00000008317)	ENSMOCG00000015470	ENSMOCG00000003469	Reg3g (ENSMOCG00000000838)	Reg2 (ENSMOCG00000019434)	Reg3b (ENSMOCG00000000127)	ENSMOCG00000019395	Lrrtm1 (ENSMOCG00000015921)	ENSMOCG00000016382	ENSMOCG00000004435	Suclg1 (ENSMOCG00000021421) #17	Dnah6 (ENSMOCG00000002417) #18	ENSMOCG00000012602 #20	Kcmf1 (ENSMOCG00000003279) #21	Tcf7l1 (ENSMOCG00000012953) #22	ENSMOCG00000000091 #25	Retsat (ENSMOCG00000021447) #27	ENSMOCG00000000675	ENSMOCG00000002524	Elmod3 (ENSMOCG00000015870) #28	Capg (ENSMOCG00000005806) #29	Sh2d6 (ENSMOCG00000015508)	ENSMOCG00000011611 #32	Ggcx (ENSMOCG00000017281) #33	Vamp8 (ENSMOCG00000004037) #34	Vamp5 (ENSMOCG00000014948)	ENSMOCG00000020563 #35	Tmem150a (ENSMOCG00000012440) #36	0610030E20Rik (ENSMOCG00000022948) #37	Usp39 (ENSMOCG00000014162)
Northern American deer mouse	MODERN SPECIES	16	ENSPEMG00000014440	Reg3b (ENSPEMG00000009322)	Lrrtm1 (ENSPEMG00000019466)	ENSPEMG00000024773	Ctnna2 (ENSPEMG00000019898)	ENSPEMG00000028022	ENSPEMG00000029707	ENSPEMG00000024691	ENSPEMG00000029513	Jkampl (ENSPEMG00000024694)	Suclg1 (ENSPEMG00000010810) #17	Dnah6 (ENSPEMG00000023939) #18	ENSPEMG00000030958 #20	ENSPEMG00000026592	Kcmf1 (ENSPEMG00000029405) #21	Tcf7l1 (ENSPEMG00000004714) #22	Tgoln1 (ENSPEMG00000007145) #25	Retsat (ENSPEMG00000011191) #27	Elmod3 (ENSPEMG00000010510) #28	Capg (ENSPEMG00000018215) #29	Sh2d6 (ENSPEMG00000016371)	Mat2a (ENSPEMG00000015257) #32	Ggcx (ENSPEMG00000013327) #33	Vamp8 (ENSPEMG00000029313) #34	Vamp5 (ENSPEMG00000027040)	ENSPEMG00000010283 #35	Tmem150a (ENSPEMG00000018551) #36	0610030E20Rik (ENSPEMG00000025650) #37	Usp39 (ENSPEMG00000030030)	Sftpb (ENSPEMG00000013792)	Atoh8 (ENSPEMG00000014683)
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447.y.a.a	ENSGT00940000162393.a	ENSGT00940000162393.b	ENSGT00940000162300	ENSGT00940000154447.y.b.b	ENSGT00940000154447.y.b.a	ENSGT00940000154447.y.a.b	ENSGT01030000234543.A.a	ENSGT00390000018097.j	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909.g #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Chinese hamster chok1gshd	MODERN SPECIES	242	ENSCGRG00001015880	ENSCGRG00001016319	Reg3g (ENSCGRG00001014964)	Reg1 (ENSCGRG00001015288)	Reg2 (ENSCGRG00001016071)	ENSCGRG00001016649	Reg3d (ENSCGRG00001017441)	Reg3b (ENSCGRG00001018138)	Ctnna2 (ENSCGRG00001000241)	Jkampl (ENSCGRG00001016234)	Suclg1 (ENSCGRG00001007965) #17	Dnah6 (ENSCGRG00001001087) #18	ENSCGRG00001017576	Tmsb10b (ENSCGRG00001017927) #20	Kcmf1 (ENSCGRG00001018737) #21	Tcf7l1 (ENSCGRG00001021396) #22	ENSCGRG00001022789 #25	Retsat (ENSCGRG00001023894) #27	Elmod3 (ENSCGRG00001000477) #28	Capg (ENSCGRG00001001836) #29	Sh2d6 (ENSCGRG00001007691)	Mat2a (ENSCGRG00001010053) #32	Ggcx (ENSCGRG00001012860) #33	Vamp8 (ENSCGRG00001014727) #34	Vamp5 (ENSCGRG00001015261)	Tmem150a (ENSCGRG00001016577) #36	Rnf181 (ENSCGRG00001017863)	0610030E20Rik (ENSCGRG00001019313) #37	Usp39 (ENSCGRG00001019807)	Sftpb (ENSCGRG00001020533)	Atoh8 (ENSCGRG00001000824)
Golden Hamster	MODERN SPECIES	698	Lrrtm4 (ENSMAUG00000021688)	ENSMAUG00000020837	Reg3gamma (ENSMAUG00000013518)	Reg2 (ENSMAUG00000000796)	ENSMAUG00000009913	Reg3d (ENSMAUG00000001387)	Reg3b (ENSMAUG00000004298)	ENSMAUG00000015429	Lrrtm1 (ENSMAUG00000020167)	ENSMAUG00000011430	Ctnna2 (ENSMAUG00000000931)	Suclg1 (ENSMAUG00000020136) #17	Dnah6 (ENSMAUG00000016714) #18	Tmsb10b (ENSMAUG00000019611) #20	ENSMAUG00000014740 #21	Tcf7l1 (ENSMAUG00000015617) #22	ENSMAUG00000018817 #25	Retsat (ENSMAUG00000005648) #27	Elmod3 (ENSMAUG00000009226) #28	Capg (ENSMAUG00000001858) #29
Murinae	ANCESTRAL SPECIES	4	ENSGT00940000154909	ENSGT00940000154447.y.a.a	ENSGT00940000162393.a	ENSGT00940000162393.b	ENSGT00940000154447.y.b.b	ENSGT00940000154447.y.b.a	ENSGT00940000154447.y.a.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00390000018097.j	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000165681	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Mus	ANCESTRAL SPECIES	12	ENSGT00940000154909	ENSGT00940000154447.y.a.a	ENSGT00940000162393.a	ENSGT00940000162393.b	ENSGT00940000154447.y.b.b	ENSGT00940000154447.y.b.a	ENSGT00940000154447.y.a.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00390000018097.j	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000165681	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000154909	ENSGT00940000154447.y.a.a	ENSGT00940000162393.a	ENSGT00940000162393.b	ENSGT00940000154447.y.b.b	ENSGT00940000154447.y.b.a	ENSGT00940000154447.y.a.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00390000018097.j	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000165681	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a.g #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Mus_B	ANCESTRAL SPECIES	15	ENSGT00940000154909	ENSGT00950000184960	ENSGT00940000154447.y.a.a	ENSGT00940000162393.a	ENSGT00940000162393.b	ENSGT00940000154447.y.b.b	ENSGT00940000154447.y.b.a	ENSGT00940000154447.y.a.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00390000018097.j	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a.g #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Mus_C	ANCESTRAL SPECIES	18	ENSGT00940000154909	ENSGT00950000184960	ENSGT00940000154447.y.a.a	ENSGT00940000162393.a	ENSGT00940000162393.b	ENSGT00940000154447.y.b.b	ENSGT00940000154447.y.b.a	ENSGT00940000154447.y.a.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00390000018097.j	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a.g #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
spretus	MODERN SPECIES	15	Lrrtm4 (MGP_SPRETEiJ_G0029531)	Gm20594 (MGP_SPRETEiJ_G0029530)	Reg3g (MGP_SPRETEiJ_G0029529)	Reg1 (MGP_SPRETEiJ_G0029528)	Reg2 (MGP_SPRETEiJ_G0029527)	Reg3a (MGP_SPRETEiJ_G0029526)	Reg3d (MGP_SPRETEiJ_G0029525)	Reg3b (MGP_SPRETEiJ_G0029524)	Lrrtm1 (MGP_SPRETEiJ_G0029523)	Ctnna2 (MGP_SPRETEiJ_G0029522)	Jkampl (MGP_SPRETEiJ_G0029521)	Suclg1 (MGP_SPRETEiJ_G0029520) #17	Dnah6 (MGP_SPRETEiJ_G0029519) #18	MGP_SPRETEiJ_G0029518	Kcmf1 (MGP_SPRETEiJ_G0029517) #21	Tcf7l1 (MGP_SPRETEiJ_G0029516) #22	Tgoln1 (MGP_SPRETEiJ_G0029515) #25	Retsat (MGP_SPRETEiJ_G0029514) #27	Elmod3 (MGP_SPRETEiJ_G0029513) #28	Capg (MGP_SPRETEiJ_G0029512) #29	MGP_SPRETEiJ_G0029511	Mat2a (MGP_SPRETEiJ_G0029510) #32	Ggcx (MGP_SPRETEiJ_G0029509) #33	Vamp8 (MGP_SPRETEiJ_G0029508) #34	Vamp5 (MGP_SPRETEiJ_G0029507)	Rnf181 (MGP_SPRETEiJ_G0029506)	Tmem150a (MGP_SPRETEiJ_G0029505) #36	0610030E20Rik (MGP_SPRETEiJ_G0029504) #37	Usp39 (MGP_SPRETEiJ_G0029503)	Sftpb (MGP_SPRETEiJ_G0029502)	Atoh8 (MGP_SPRETEiJ_G0029501)
Steppe mouse	MODERN SPECIES	3287				ENSMSIG00000006947	Jkampl (ENSMSIG00000006959)	ENSMSIG00000006968	ENSMSIG00000006987	ENSMSIG00000006991	ENSMSIG00000006995	Suclg1 (ENSMSIG00000007008) #17	ENSMSIG00000007054	ENSMSIG00000007062	Dnah6 (ENSMSIG00000007091) #18	Tmsb10b (ENSMSIG00000007285) #20	Kcmf1 (ENSMSIG00000007304) #21	Tcf7l1 (ENSMSIG00000007365) #22	ENSMSIG00000007493 #25	Retsat (ENSMSIG00000007552) #27	Elmod3 (ENSMSIG00000007675) #28	Capg (ENSMSIG00000007704) #29	Sh2d6 (ENSMSIG00000007788)	Mat2a (ENSMSIG00000007887) #32	Ggcx (ENSMSIG00000007972) #33	Vamp8 (ENSMSIG00000008076) #34	ENSMSIG00000008096	ENSMSIG00000008118 #35	Tmem150a (ENSMSIG00000008166) #36	0610030E20Rik (ENSMSIG00000008200) #37	Usp39 (ENSMSIG00000008226)	Sftpb (ENSMSIG00000008238)	Atoh8 (ENSMSIG00000008291)
Mouse	MODERN SPECIES	15	Gm20594 (ENSMUSG00000096887)	Reg3g (ENSMUSG00000030017)	Reg1 (ENSMUSG00000059654)	Reg2 (ENSMUSG00000023140)	Reg3a (ENSMUSG00000079516)	Reg3d (ENSMUSG00000068341)	Reg3b (ENSMUSG00000071356)	Lrrtm1 (ENSMUSG00000060780)	Ctnna2 (ENSMUSG00000063063)	Gm9008 (ENSMUSG00000072476)	Jkampl (ENSMUSG00000056197)	Suclg1 (ENSMUSG00000052738) #17	Dnah6 (ENSMUSG00000052861) #18	Tmsb10 (ENSMUSG00000079523)	Kcmf1 (ENSMUSG00000055239) #21	Tcf7l1 (ENSMUSG00000055799) #22	Tgoln1 (ENSMUSG00000056429) #25	Retsat (ENSMUSG00000056666) #27	Elmod3 (ENSMUSG00000056698) #28	Capg (ENSMUSG00000056737) #29	Sh2d6 (ENSMUSG00000052631)	Mat2a (ENSMUSG00000053907) #32	Ggcx (ENSMUSG00000053460) #33	Vamp8 (ENSMUSG00000050732) #34	Vamp5 (ENSMUSG00000073002)	Rnf181 (ENSMUSG00000055850)	Tmem150a (ENSMUSG00000055912) #36	0610030E20Rik (ENSMUSG00000058706) #37	Usp39 (ENSMUSG00000056305)	Sftpb (ENSMUSG00000056370)	Atoh8 (ENSMUSG00000037621)
Ryukyu mouse	MODERN SPECIES	15	Gcfc2 (MGP_CAROLIEiJ_G0028526)	Lrrtm4 (MGP_CAROLIEiJ_G0028525)	Reg3g (MGP_CAROLIEiJ_G0028524)	Reg1 (MGP_CAROLIEiJ_G0028523)	Reg2 (MGP_CAROLIEiJ_G0028522)	Reg3a (MGP_CAROLIEiJ_G0028521)	Reg3d (MGP_CAROLIEiJ_G0028520)	Reg3b (MGP_CAROLIEiJ_G0028519)	Lrrtm1 (MGP_CAROLIEiJ_G0028518)	Ctnna2 (MGP_CAROLIEiJ_G0028517)	Jkampl (MGP_CAROLIEiJ_G0028516)	Suclg1 (MGP_CAROLIEiJ_G0028515) #17	Dnah6 (MGP_CAROLIEiJ_G0028514) #18	Tmsb10 (MGP_CAROLIEiJ_G0028513)	Kcmf1 (MGP_CAROLIEiJ_G0028512) #21	Tcf7l1 (MGP_CAROLIEiJ_G0028511) #22	Tgoln1 (MGP_CAROLIEiJ_G0028510) #25	Retsat (MGP_CAROLIEiJ_G0028509) #27	Elmod3 (MGP_CAROLIEiJ_G0028508) #28	Capg (MGP_CAROLIEiJ_G0028507) #29	Sh2d6 (MGP_CAROLIEiJ_G0028506)	Mat2a (MGP_CAROLIEiJ_G0028505) #32	Ggcx (MGP_CAROLIEiJ_G0028504) #33	Vamp8 (MGP_CAROLIEiJ_G0028503) #34	Vamp5 (MGP_CAROLIEiJ_G0028502)	MGP_CAROLIEiJ_G0028501 #35	Tmem150a (MGP_CAROLIEiJ_G0028500) #36	0610030E20Rik (MGP_CAROLIEiJ_G0028499) #37	Usp39 (MGP_CAROLIEiJ_G0028498)	Sftpb (MGP_CAROLIEiJ_G0028497)	Atoh8 (MGP_CAROLIEiJ_G0028496)
Shrew mouse	MODERN SPECIES	11	Gcfc2 (MGP_PahariEiJ_G0022261)	Lrrtm4 (MGP_PahariEiJ_G0022260)	Reg3g (MGP_PahariEiJ_G0022259)	Reg1 (MGP_PahariEiJ_G0022258)	Reg2 (MGP_PahariEiJ_G0022257)	Reg3a (MGP_PahariEiJ_G0022256)	MGP_PahariEiJ_G0022255	Reg3b (MGP_PahariEiJ_G0022254)	Lrrtm1 (MGP_PahariEiJ_G0022253)	Ctnna2 (MGP_PahariEiJ_G0022252)	Jkampl (MGP_PahariEiJ_G0022251)	Suclg1 (MGP_PahariEiJ_G0022250) #17	Dnah6 (MGP_PahariEiJ_G0022249) #18	Tmsb10 (MGP_PahariEiJ_G0022248)	Kcmf1 (MGP_PahariEiJ_G0022247) #21	Tcf7l1 (MGP_PahariEiJ_G0022246) #22	MGP_PahariEiJ_G0022245 #25	Retsat (MGP_PahariEiJ_G0022244) #27	Elmod3 (MGP_PahariEiJ_G0022243) #28	Capg (MGP_PahariEiJ_G0022242) #29	Sh2d6 (MGP_PahariEiJ_G0022241)	Mat2a (MGP_PahariEiJ_G0022240) #32	Ggcx (MGP_PahariEiJ_G0022239) #33	Vamp8 (MGP_PahariEiJ_G0022238) #34	Rnf181 (MGP_PahariEiJ_G0022237)	Tmem150a (MGP_PahariEiJ_G0022236) #36	0610030E20Rik (MGP_PahariEiJ_G0022235) #37	Usp39 (MGP_PahariEiJ_G0022234)	Sftpb (MGP_PahariEiJ_G0022233)	Atoh8 (MGP_PahariEiJ_G0022232)	St3gal5 (MGP_PahariEiJ_G0022231)
Rat	MODERN SPECIES	14	Lrrtm4 (ENSRNOG00000021938)	Reg3g (ENSRNOG00000006579)	Reg1a (ENSRNOG00000006486)	Reg3a (ENSRNOG00000006360)	Reg3b (ENSRNOG00000006151)	LRRTM1 (ENSRNOG00000006093)	Ctnna2 (ENSRNOG00000006003)	ENSRNOG00000066158	ENSRNOG00000071146	Ptbp1-ps3 (ENSRNOG00000070516)	Jkampl (ENSRNOG00000024604)	Suclg1 (ENSRNOG00000005587) #17	Dnah6 (ENSRNOG00000015581) #18	Tmsb10 (ENSRNOG00000064090)	Kcmf1 (ENSRNOG00000015097) #21	Tcf7l1 (ENSRNOG00000014753) #22	Tgoln2 (ENSRNOG00000014617) #25	Retsat (ENSRNOG00000014090) #27	Elmod3 (ENSRNOG00000038102) #28	Capg (ENSRNOG00000013668) #29	Sh2d6 (ENSRNOG00000013605)	Mat2a (ENSRNOG00000013520) #32	Ggcx (ENSRNOG00000012975) #33	Vamp8 (ENSRNOG00000012748) #34	Vamp5 (ENSRNOG00000012659)	Rnf181 (ENSRNOG00000012035) #35	Tmem150a (ENSRNOG00000061100) #36	LOC691113 (ENSRNOG00000011713) #37	Usp39 (ENSRNOG00000010930)	Sftpb (ENSRNOG00000010761)	Atoh8 (ENSRNOG00000010716)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1096								ENSNGAG00000009815	Jkampl (ENSNGAG00000013694)	ENSNGAG00000023092	Suclg1 (ENSNGAG00000015283) #17	ENSNGAG00000013792	Dnah6 (ENSNGAG00000013760) #18	Tmsb10b (ENSNGAG00000016585) #20	ENSNGAG00000017279 #21	Tcf7l1 (ENSNGAG00000020122) #22	Retsat (ENSNGAG00000007772) #27	Elmod3 (ENSNGAG00000017699) #28	Capg (ENSNGAG00000019315) #29	Sh2d6 (ENSNGAG00000000856)	Mat2a (ENSNGAG00000014289) #32	Ggcx (ENSNGAG00000000695) #33	ENSNGAG00000014911 #34	Vamp5 (ENSNGAG00000022303)	ENSNGAG00000010364 #35	Tmem150a (ENSNGAG00000000493) #36	0610030E20Rik (ENSNGAG00000012174) #37	Usp39 (ENSNGAG00000018760)	Sftpb (ENSNGAG00000020909)	Atoh8 (ENSNGAG00000017424)	ENSNGAG00000017959
Lesser Egyptian jerboa	MODERN SPECIES	77	ENSJJAG00000023603	ENSJJAG00000020877	Lrrtm1 (ENSJJAG00000021646)	Ctnna2 (ENSJJAG00000020758)	ENSJJAG00000014736	ENSJJAG00000024130	ENSJJAG00000014417	ENSJJAG00000001553	Suclg1 (ENSJJAG00000023782) #17	ENSJJAG00000020479	Dnah6 (ENSJJAG00000013999) #18	ENSJJAG00000009987 #20	ENSJJAG00000006387	Kcmf1 (ENSJJAG00000020771) #21	ENSJJAG00000010136	Tcf7l1 (ENSJJAG00000023485) #22	ENSJJAG00000022764	Retsat (ENSJJAG00000018206) #27	Elmod3 (ENSJJAG00000015903) #28	Capg (ENSJJAG00000011988) #29	Sh2d6 (ENSJJAG00000011036)	Mat2a (ENSJJAG00000019942) #32	Ggcx (ENSJJAG00000013219) #33	Vamp8 (ENSJJAG00000023575) #34	Vamp5 (ENSJJAG00000021713)	ENSJJAG00000012435 #35	Tmem150a (ENSJJAG00000015485) #36	Sftpb (ENSJJAG00000020339)	Atoh8 (ENSJJAG00000003684)	St3gal5 (ENSJJAG00000012802)	Polr1a (ENSJJAG00000013113)
Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447	ENSGT00940000162300	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157038 #22
Hedgehog	MODERN SPECIES	4743																TCF7L1 (ENSEEUG00000003751) #22
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000154447	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000154447	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000154447	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Equus	ANCESTRAL SPECIES	7	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000180261	ENSGT00940000154447.x	ENSGT00940000154447.w	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000165681	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Donkey	MODERN SPECIES	26	MRPL19 (ENSEASG00005010729)	GCFC2 (ENSEASG00005010738)	ENSEASG00005034159	LRRTM4 (ENSEASG00005010753)	ENSEASG00005010754	ENSEASG00005010755	ENSEASG00005010756	CTNNA2 (ENSEASG00005001230)	ENSEASG00005001226	SUCLG1 (ENSEASG00005001258) #17	DNAH6 (ENSEASG00005001279) #18	TRABD2A (ENSEASG00005001397) #19	ENSEASG00005032677	ENSEASG00005001404 #21	ENSEASG00005030964 #21	TCF7L1 (ENSEASG00005001412) #22	ENSEASG00005001427 #25	RETSAT (ENSEASG00005027102) #27	ENSEASG00005001441 #28	CAPG (ENSEASG00005001445) #29	SH2D6 (ENSEASG00005001453)	MAT2A (ENSEASG00005001463) #32	GGCX (ENSEASG00005001468) #33	VAMP8 (ENSEASG00005023642) #34	VAMP5 (ENSEASG00005001487)	RNF181 (ENSEASG00005029086) #35	TMEM150A (ENSEASG00005001495) #36	ENSEASG00005033768 #37	USP39 (ENSEASG00005001505)	SFTPB (ENSEASG00005001518)	ENSEASG00005001603
Horse	MODERN SPECIES	6	ENSECAG00000028131	ENSECAG00000046174	ENSECAG00000009200	ENSECAG00000018356	LRRTM1 (ENSECAG00000008983)	CTNNA2 (ENSECAG00000024444)	ENSECAG00000021344	ENSECAG00000052814 #17	ENSECAG00000046045 #17	ENSECAG00000057371 #17	ENSECAG00000059635 #17	DNAH6 (ENSECAG00000011573) #18	ENSECAG00000038584	KCMF1 (ENSECAG00000024834) #21	TRABD2A (ENSECAG00000010499) #19	TCF7L1 (ENSECAG00000022931) #22	ENSECAG00000037048 #25	RETSAT (ENSECAG00000010342) #27	ELMOD3 (ENSECAG00000020629) #28	CAPG (ENSECAG00000015128) #29	SH2D6 (ENSECAG00000013097)	MAT2A (ENSECAG00000007391) #32	GGCX (ENSECAG00000010458) #33	VAMP8 (ENSECAG00000009514) #34	VAMP5 (ENSECAG00000007788)	RNF181 (ENSECAG00000000327)	TMEM150A (ENSECAG00000017462) #36	USP39 (ENSECAG00000002856)	SFTPB (ENSECAG00000019375)	GNLY (ENSECAG00000015819)	ATOH8 (ENSECAG00000039231)
Chiroptera	ANCESTRAL SPECIES	10	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000154447	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160433.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00910000146589 #31	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Megabat	MODERN SPECIES	1398																TCF7L1 (ENSPVAG00000002649) #22
Microchiroptera	ANCESTRAL SPECIES	14	ENSGT00950000182787.C	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447.u	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160433.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00910000146589 #31	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Microbat	MODERN SPECIES	1227												SUCLG1 (ENSMLUG00000012370) #17	DNAH6 (ENSMLUG00000004395) #18	ENSMLUG00000027485	KCMF1 (ENSMLUG00000000979) #21	TCF7L1 (ENSMLUG00000003918) #22	ENSMLUG00000029386 #25	RETSAT (ENSMLUG00000003920) #27	ELMOD3 (ENSMLUG00000003924) #28
Greater horseshoe bat	MODERN SPECIES	4	MRPL19 (ENSRFEG00010005699)	GCFC2 (ENSRFEG00010005629)	ENSRFEG00010005599	LRRTM4 (ENSRFEG00010005568)	ENSRFEG00010005543	ENSRFEG00010014244	ENSRFEG00010014177	LRRTM1 (ENSRFEG00010013989)	CTNNA2 (ENSRFEG00010013591)	ENSRFEG00010013508	SUCLG1 (ENSRFEG00010013453) #17	DNAH6 (ENSRFEG00010012455) #18	TMSB10 (ENSRFEG00010012256) #20	KCMF1 (ENSRFEG00010012206) #21	ENSRFEG00010012190	TCF7L1 (ENSRFEG00010012140) #22	ENSRFEG00010012085 #25	RETSAT (ENSRFEG00010012053) #27	ELMOD3 (ENSRFEG00010011983) #28	CAPG (ENSRFEG00010011887) #29	ENSRFEG00010011863 #31	MAT2A (ENSRFEG00010011814) #32	GGCX (ENSRFEG00010011702) #33	VAMP8 (ENSRFEG00010011634) #34	ENSRFEG00010011487	TMEM150A (ENSRFEG00010011398) #36	C2orf68 (ENSRFEG00010011347) #37	USP39 (ENSRFEG00010010822)	SFTPB (ENSRFEG00010010754)	ENSRFEG00010010730	ATOH8 (ENSRFEG00010010652)
Carnivora	ANCESTRAL SPECIES	19	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000154447	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154466.z	ENSGT00940000154909	ENSGT00390000004322.a.b.j.f.a.a	ENSGT00940000154447	ENSGT00940000162300	ENSGT00940000161705	ENSGT00940000154818.a.b	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Cat	MODERN SPECIES	2	GCFC2 (ENSFCAG00000018337)	ENSFCAG00000028961	LRRTM4 (ENSFCAG00000029130)	ENSFCAG00000047596	ENSFCAG00000037265	ENSFCAG00000035055	CTNNA2 (ENSFCAG00000028296)	LRRTM1 (ENSFCAG00000022997)	ENSFCAG00000039414	ENSFCAG00000031148	SUCLG1 (ENSFCAG00000005140) #17	DNAH6 (ENSFCAG00000000768) #18	TRABD2A (ENSFCAG00000000770) #19	TMSB10 (ENSFCAG00000046545) #20	KCMF1 (ENSFCAG00000044295) #21	TCF7L1 (ENSFCAG00000003376) #22	ENSFCAG00000037179 #25	RETSAT (ENSFCAG00000003377) #27	ELMOD3 (ENSFCAG00000003378) #28	CAPG (ENSFCAG00000003379) #29	SH2D6 (ENSFCAG00000003381)	MAT2A (ENSFCAG00000011965) #32	GGCX (ENSFCAG00000011967) #33	VAMP8 (ENSFCAG00000011968) #34	VAMP5 (ENSFCAG00000024700)	RNF181 (ENSFCAG00000011969) #35	TMEM150A (ENSFCAG00000024246) #36	CA3H2orf68 (ENSFCAG00000028683) #37	USP39 (ENSFCAG00000011972)	SFTPB (ENSFCAG00000018868)	ATOH8 (ENSFCAG00000038037)
Panthera	ANCESTRAL SPECIES	2	ENSGT00390000000455.b	ENSGT00940000154466.z	ENSGT00940000154909	ENSGT00940000154447.q	ENSGT00390000004322.a.b.j.f.a.a	ENSGT00940000154447.r	ENSGT00940000162300	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000154818.a.b	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154466.z	ENSGT00940000154909	ENSGT00390000004322.a.b.j.f.a.a	ENSGT00940000154447.r	ENSGT00940000162300	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
leopard	MODERN SPECIES		ENSPPRG00000020405	LRRTM4 (ENSPPRG00000007603)	ENSPPRG00000007590	ENSPPRG00000007566	ENSPPRG00000007546	ENSPPRG00000007531	LRRTM1 (ENSPPRG00000020381)	CTNNA2 (ENSPPRG00000007522)	ENSPPRG00000007459	ENSPPRG00000007449	ENSPPRG00000020355	SUCLG1 (ENSPPRG00000007440) #17	DNAH6 (ENSPPRG00000007406) #18	TRABD2A (ENSPPRG00000007266) #19	KCMF1 (ENSPPRG00000007234) #21	TCF7L1 (ENSPPRG00000007227) #22	ENSPPRG00000007210 #25	RETSAT (ENSPPRG00000007198) #27	ELMOD3 (ENSPPRG00000007176) #28	CAPG (ENSPPRG00000007161) #29	ENSPPRG00000007139	MAT2A (ENSPPRG00000007128) #32	GGCX (ENSPPRG00000007103) #33	VAMP8 (ENSPPRG00000007071) #34	VAMP5 (ENSPPRG00000007056)	RNF181 (ENSPPRG00000007048) #35	TMEM150A (ENSPPRG00000007030) #36	C2orf68 (ENSPPRG00000006996) #37	USP39 (ENSPPRG00000006971)	SFTPB (ENSPPRG00000006829)	ATOH8 (ENSPPRG00000006780)
lion	MODERN SPECIES	3	ENSPLOG00000002860	LRRTM4 (ENSPLOG00000002833)	ENSPLOG00000002800	ENSPLOG00000002766	ENSPLOG00000002744	LRRTM1 (ENSPLOG00000002714)	CTNNA2 (ENSPLOG00000002544)	ENSPLOG00000002342	ENSPLOG00000002329	ENSPLOG00000002306	SUCLG1 (ENSPLOG00000002282) #17	DNAH6 (ENSPLOG00000002257) #18	TRABD2A (ENSPLOG00000002215) #19	TMSB10 (ENSPLOG00000002183) #20	KCMF1 (ENSPLOG00000002171) #21	TCF7L1 (ENSPLOG00000002149) #22	ENSPLOG00000002132 #25	RETSAT (ENSPLOG00000002122) #27	ELMOD3 (ENSPLOG00000002100) #28	CAPG (ENSPLOG00000002073) #29	SH2D6 (ENSPLOG00000002043)	MAT2A (ENSPLOG00000002012) #32	GGCX (ENSPLOG00000001958) #33	VAMP8 (ENSPLOG00000001925) #34	VAMP5 (ENSPLOG00000001920)	RNF181 (ENSPLOG00000001904) #35	TMEM150A (ENSPLOG00000001876) #36	C2orf68 (ENSPLOG00000001851) #37	USP39 (ENSPLOG00000001816)	SFTPB (ENSPLOG00000001786)	ATOH8 (ENSPLOG00000001776)
Tiger	MODERN SPECIES	170															KCMF1 (ENSPTIG00000012661) #21	TCF7L1 (ENSPTIG00000012726) #22	ENSPTIG00000012874 #25	RETSAT (ENSPTIG00000012901) #27	ELMOD3 (ENSPTIG00000012942) #28	CAPG (ENSPTIG00000013355) #29	ENSPTIG00000013587	MAT2A (ENSPTIG00000013684) #32	GGCX (ENSPTIG00000013923) #33	VAMP8 (ENSPTIG00000014405) #34	VAMP5 (ENSPTIG00000014511)	RNF181 (ENSPTIG00000014685) #35	TMEM150A (ENSPTIG00000015089) #36	C2orf68 (ENSPTIG00000015638) #37	USP39 (ENSPTIG00000015767)	SFTPB (ENSPTIG00000016782)	ST3GAL5 (ENSPTIG00000017771)
Caniformia	ANCESTRAL SPECIES	18	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000154447	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Canidae	ANCESTRAL SPECIES	25	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000164757	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b.c #34	ENSGT00730000111371.c	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975.c
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300.s	ENSGT00940000162300.t	ENSGT01030000234543.A.a	ENSGT00390000009819.a.b.a.a.a.a.a.eb.b	ENSGT00940000161705	ENSGT00940000164757	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b.c #34	ENSGT00730000111371.c	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975.c
Dog	MODERN SPECIES	8	GCFC2 (ENSCAFG00845016265)	LRRTM4 (ENSCAFG00845016025)	REG3A (ENSCAFG00845015870)	ENSCAFG00845015791	ENSCAFG00845015711	LRRTM1 (ENSCAFG00845015691)	ENSCAFG00845015338	ENSCAFG00845015074	ENSCAFG00845014940	SUCLG1 (ENSCAFG00845014907) #17	ENSCAFG00845014884	DNAH6 (ENSCAFG00845014818) #18	TRABD2A (ENSCAFG00845014743) #19	ENSCAFG00845014717 #20	ENSCAFG00845014677 #21	TCF7L1 (ENSCAFG00845014626) #22	ENSCAFG00845014600 #25	RETSAT (ENSCAFG00845014569) #27	ELMOD3 (ENSCAFG00845014524) #28	CAPG (ENSCAFG00845014410) #29	SH2D6 (ENSCAFG00845014343)	MAT2A (ENSCAFG00845014310) #32	GGCX (ENSCAFG00845014233) #33	VAMP8 (ENSCAFG00845014183) #34	VAMP5 (ENSCAFG00845014173)	RNF181 (ENSCAFG00845014162) #35	TMEM150A (ENSCAFG00845014140) #36	C17H2orf68 (ENSCAFG00845014119) #37	USP39 (ENSCAFG00845014083)	SFTPB (ENSCAFG00845014035)	ENSCAFG00845013982
Dingo	MODERN SPECIES	223	ENSCAFG00020014297	ENSCAFG00020014300	LRRTM1 (ENSCAFG00020014306)	CTNNA2 (ENSCAFG00020014334)	ENSCAFG00020014527	ENSCAFG00020014532	ENSCAFG00020014539	SUCLG1 (ENSCAFG00020014543) #17	DNAH6 (ENSCAFG00020014555) #18	ENSCAFG00020014589	TRABD2A (ENSCAFG00020014595) #19	ENSCAFG00020014598	ENSCAFG00020014600 #20	ENSCAFG00020014601 #21	ENSCAFG00020014602 #21	TCF7L1 (ENSCAFG00020014607) #22	ENSCAFG00020014645 #25	RETSAT (ENSCAFG00020014651) #27	ELMOD3 (ENSCAFG00020014656) #28	CAPG (ENSCAFG00020014661) #29	ENSCAFG00020014664	MAT2A (ENSCAFG00020014669) #32	GGCX (ENSCAFG00020014674) #33	ENSCAFG00020014679 #34	ENSCAFG00020014680	RNF181 (ENSCAFG00020014682) #35	TMEM150A (ENSCAFG00020014685) #36	C2orf68 (ENSCAFG00020014687) #37	USP39 (ENSCAFG00020014690)	SFTPB (ENSCAFG00020014705)	ENSCAFG00020014715
Red fox	MODERN SPECIES	16	ENSVVUG00000003969	EVA1A (ENSVVUG00000003961)	MRPL19 (ENSVVUG00000003947)	GCFC2 (ENSVVUG00000003380)	LRRTM4 (ENSVVUG00000003318)	ENSVVUG00000003303	ENSVVUG00000003296	ENSVVUG00000003267	LRRTM1 (ENSVVUG00000003240)	CTNNA2 (ENSVVUG00000003221)	ENSVVUG00000003155	SUCLG1 (ENSVVUG00000003108) #17	DNAH6 (ENSVVUG00000002546) #18	TRABD2A (ENSVVUG00000002449) #19	KCMF1 (ENSVVUG00000002440) #21	TCF7L1 (ENSVVUG00000001883) #22	TGOLN2 (ENSVVUG00000001860) #25	RETSAT (ENSVVUG00000001843) #27	ELMOD3 (ENSVVUG00000001825) #28	CAPG (ENSVVUG00000001799) #29	ENSVVUG00000001782	MAT2A (ENSVVUG00000001771) #32	GGCX (ENSVVUG00000001756) #33	VAMP8 (ENSVVUG00000001728) #34	ENSVVUG00000001721	RNF181 (ENSVVUG00000001710) #35	TMEM150A (ENSVVUG00000001694) #36	CUNH2orf68 (ENSVVUG00000001683) #37	USP39 (ENSVVUG00000001660)	SFTPB (ENSVVUG00000001389)	ENSVVUG00000001345
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000154447	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Mustelinae	ANCESTRAL SPECIES	16	ENSGT00950000182787.C	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
American mink	MODERN SPECIES	8	POLE4 (ENSNVIG00000019850)	TACR1 (ENSNVIG00000019835)	EVA1A (ENSNVIG00000019826)	MRPL19 (ENSNVIG00000019794)	GCFC2 (ENSNVIG00000019670)	LRRT4 (ENSNVIG00000019637)	ENSNVIG00000019606	ENSNVIG00000019589	LRRTM1 (ENSNVIG00000019580)	CTNNA2 (ENSNVIG00000019316)	SUCLG1 (ENSNVIG00000019244) #17	DNAH6 (ENSNVIG00000019022) #18	TRABD2A (ENSNVIG00000018979) #19	TMSB10 (ENSNVIG00000018969) #20	KCMF1 (ENSNVIG00000018936) #21	TCF7L1 (ENSNVIG00000018900) #22	ENSNVIG00000018872 #25	RETSAT (ENSNVIG00000018862) #27	ELMD3 (ENSNVIG00000018754) #28	CAPG (ENSNVIG00000018696) #29	ENSNVIG00000018664	MAT2A (ENSNVIG00000018646) #32	GGCX (ENSNVIG00000018617) #33	VAMP8 (ENSNVIG00000018603) #34	VAMP5 (ENSNVIG00000018599)	RNF181 (ENSNVIG00000018591) #35	TMEM150A (ENSNVIG00000018553) #36	C2orf68 (ENSNVIG00000018547) #37	ENSNVIG00000018464	SFTPB (ENSNVIG00000018449)	ATOH8 (ENSNVIG00000018445)
Ferret	MODERN SPECIES	169	TACR1 (ENSMPUG00000008365)	ENSMPUG00000018835	EVA1A (ENSMPUG00000008405)	MRPL19 (ENSMPUG00000008410)	GCFC2 (ENSMPUG00000008412)	LRRTM4 (ENSMPUG00000008512)	ENSMPUG00000008521	ENSMPUG00000008526	ENSMPUG00000008534	LRRTM1 (ENSMPUG00000018841)	ENSMPUG00000008539	SUCLG1 (ENSMPUG00000008566) #17	DNAH6 (ENSMPUG00000008574) #18	TRABD2A (ENSMPUG00000008622) #19	KCMF1 (ENSMPUG00000008632) #21	TCF7L1 (ENSMPUG00000008657) #22	ENSMPUG00000008755 #25	RETSAT (ENSMPUG00000008763) #27	ELMOD3 (ENSMPUG00000008834) #28	CAPG (ENSMPUG00000008841) #29	SH2D6 (ENSMPUG00000008909)	MAT2A (ENSMPUG00000008933) #32	GGCX (ENSMPUG00000009028) #33	VAMP8 (ENSMPUG00000009038) #34	VAMP5 (ENSMPUG00000009046)	RNF181 (ENSMPUG00000009053) #35	TMEM150A (ENSMPUG00000009058) #36	C2orf68 (ENSMPUG00000009069) #37	USP39 (ENSMPUG00000009096)	SFTPB (ENSMPUG00000009109)	ENSMPUG00000009117
Ursidae	ANCESTRAL SPECIES	9	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300	ENSGT00940000154447	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000165681	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305.b #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Giant Panda	MODERN SPECIES	14	SEMA4F (ENSAMEG00000017103)	HK2 (ENSAMEG00000017077)	ENSAMEG00000031341	TACR1 (ENSAMEG00000017070)	EVA1A (ENSAMEG00000024618)	MRPL19 (ENSAMEG00000017428)	GCFC2 (ENSAMEG00000017424)	LRRTM4 (ENSAMEG00000019156)	ENSAMEG00000030394	CTNNA2 (ENSAMEG00000010800)	LRRTM1 (ENSAMEG00000019333)	ENSAMEG00000018718	SUCLG1 (ENSAMEG00000001962) #17	DNAH6 (ENSAMEG00000002004) #18	TRABD2A (ENSAMEG00000002027) #19	TCF7L1 (ENSAMEG00000002051) #22	ENSAMEG00000031071 #25	RETSAT (ENSAMEG00000002091) #27	ENSAMEG00000002137 #28	CAPG (ENSAMEG00000002173) #29	ENSAMEG00000028845	MAT2A (ENSAMEG00000002191) #32	GGCX (ENSAMEG00000002214) #33	VAMP8 (ENSAMEG00000002268) #34	VAMP5 (ENSAMEG00000031349)	USP39 (ENSAMEG00000002291)	ENSAMEG00000002282 #36	C2orf68 (ENSAMEG00000002290) #37	SFTPB (ENSAMEG00000002317)	ATOH8 (ENSAMEG00000025438)	ST3GAL5 (ENSAMEG00000005791)
Ursus	ANCESTRAL SPECIES	55	ENSGT00940000159592	ENSGT00950000182787.C	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000162300.n	ENSGT00940000162300.m	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305.b #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
American black bear	MODERN SPECIES	520															KCMF1 (ENSUAMG00000027562) #21	TCF7L1 (ENSUAMG00000027565) #22	ENSUAMG00000027574 #25	RETSAT (ENSUAMG00000027577) #27	ELMOD3 (ENSUAMG00000027578) #28	CAPG (ENSUAMG00000027580) #29	ENSUAMG00000027581	MAT2A (ENSUAMG00000027582) #32	GGCX (ENSUAMG00000027583) #33	VAMP8 (ENSUAMG00000027584) #34	VAMP5 (ENSUAMG00000027585)	RNF181 (ENSUAMG00000027586) #35	TMEM150A (ENSUAMG00000027587) #36	C2orf68 (ENSUAMG00000027589) #37	USP39 (ENSUAMG00000027590)	SFTPB (ENSUAMG00000027593)
Polar bear	MODERN SPECIES	223	HK2 (ENSUMAG00000002381)	TACR1 (ENSUMAG00000005897)	EVA1A (ENSUMAG00000005913)	MRPL19 (ENSUMAG00000005915)	GCFC2 (ENSUMAG00000005924)	LRRTM4 (ENSUMAG00000005957)	ENSUMAG00000006014	ENSUMAG00000006019	ENSUMAG00000006060	LRRTM1 (ENSUMAG00000006088)	ENSUMAG00000006122	ENSUMAG00000006177	SUCLG1 (ENSUMAG00000006187) #17	DNAH6 (ENSUMAG00000006234) #18	KCMF1 (ENSUMAG00000006381) #21	TCF7L1 (ENSUMAG00000006395) #22	ENSUMAG00000006403 #25	RETSAT (ENSUMAG00000006406) #27	ELMOD3 (ENSUMAG00000006414) #28	CAPG (ENSUMAG00000006430) #29	ENSUMAG00000006447	MAT2A (ENSUMAG00000006459) #32	GGCX (ENSUMAG00000006501) #33	VAMP8 (ENSUMAG00000006509) #34	ENSUMAG00000006511	RNF181 (ENSUMAG00000006514) #35	TMEM150A (ENSUMAG00000006515) #36	C2orf68 (ENSUMAG00000006518) #37	USP39 (ENSUMAG00000006527)	SFTPB (ENSUMAG00000006563)	ENSUMAG00000006576
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00950000182787.C	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Suina	ANCESTRAL SPECIES	13	ENSGT00390000005656	ENSGT00940000159592	ENSGT00950000182787.C	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Pig	MODERN SPECIES	11	LRRTM4 (ENSSSCG00000008259)	ENSSSCG00000042171	ENSSSCG00000022842	ENSSSCG00000031177	ENSSSCG00000056535	ENSSSCG00000037620	ENSSSCG00000061603	ENSSSCG00000062035	LRRTM1 (ENSSSCG00000023859)	ENSSSCG00000008250	SUCLG1 (ENSSSCG00000008247) #17	DNAH6 (ENSSSCG00000045529) #18	TMSB10 (ENSSSCG00000008245)	KCMF1 (ENSSSCG00000008242) #21	ENSSSCG00000051279	ENSSSCG00000008241 #22	ENSSSCG00000050627 #25	RETSAT (ENSSSCG00000008237) #27	ELMOD3 (ENSSSCG00000008238) #28	CAPG (ENSSSCG00000008239) #29	ENSSSCG00000008240	MAT2A (ENSSSCG00000022300) #32	GGCX (ENSSSCG00000027381) #33	VAMP8 (ENSSSCG00000062938) #34	VAMP5 (ENSSSCG00000033135)	RNF181 (ENSSSCG00000008232) #35	TMEM150A (ENSSSCG00000008233) #36	C2orf68 (ENSSSCG00000028287) #37	USP39 (ENSSSCG00000030435)	SFTPB (ENSSSCG00000008229)	GNLY (ENSSSCG00000008228)
Chacoan peccary	MODERN SPECIES	778									ENSCWAG00000019058	CTNNA2 (ENSCWAG00000019150)	LRRTM1 (ENSCWAG00000019999)	SUCLG1 (ENSCWAG00000020040) #17	DNAH6 (ENSCWAG00000020066) #18	TMSB10 (ENSCWAG00000020204) #20	KCMF1 (ENSCWAG00000003682) #21	TCF7L1 (ENSCWAG00000003731) #22	ENSCWAG00000003769 #25	RETSAT (ENSCWAG00000003794) #27	ELMOD3 (ENSCWAG00000003833) #28	CAPG (ENSCWAG00000003883) #29	ENSCWAG00000003929 #31	MAT2A (ENSCWAG00000003951) #32	GGCX (ENSCWAG00000004008) #33	VAMP8 (ENSCWAG00000004178) #34	VAMP5 (ENSCWAG00000004199)	RNF181 (ENSCWAG00000004223) #35	TMEM150A (ENSCWAG00000004246) #36	C2orf68 (ENSCWAG00000004281) #37	USP39 (ENSCWAG00000004340)	SFTPB (ENSCWAG00000004607)	ENSCWAG00000004815
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00950000182787.C	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Camelidae	ANCESTRAL SPECIES	89						ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000165681	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Arabian camel	MODERN SPECIES	20				EVA1A (ENSCDRG00005008925)	MRPL19 (ENSCDRG00005017798)	GCFC2 (ENSCDRG00005017645)	LRRTM4 (ENSCDRG00005017598)	ENSCDRG00005017562	ENSCDRG00005017522	LRRTM1 (ENSCDRG00005017487)	ENSCDRG00005017214	SUCLG1 (ENSCDRG00005017092) #17	DNAH6 (ENSCDRG00005017032) #18	ENSCDRG00005016982	KCMF1 (ENSCDRG00005016907) #21	TCF7L1 (ENSCDRG00005016823) #22	ENSCDRG00005016793 #25	RETSAT (ENSCDRG00005016753) #27	ELMOD3 (ENSCDRG00005016681) #28	CAPG (ENSCDRG00005016605) #29	SH2D6 (ENSCDRG00005016477)	MAT2A (ENSCDRG00005016380) #32	GGCX (ENSCDRG00005016233) #33	VAMP8 (ENSCDRG00005016194) #34	VAMP5 (ENSCDRG00005016173)	RNF181 (ENSCDRG00005016091) #35	TMEM150A (ENSCDRG00005016019) #36	C2orf68 (ENSCDRG00005015950) #37	USP39 (ENSCDRG00005015614)	SFTPB (ENSCDRG00005015553)	ENSCDRG00005015532
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00950000182787.C	ENSGT00940000160888	ENSGT00940000153745.a	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000154909	ENSGT00940000154447	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975
Cetacea	ANCESTRAL SPECIES	16	ENSGT00940000154096.b.b.b.a	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT01100000263908.a	ENSGT00940000154909	ENSGT00940000154447.l	ENSGT00940000154447.k.a	ENSGT00940000154447.k.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Blue whale	MODERN SPECIES	4	ENSBMSG00010020957	LRRTM4 (ENSBMSG00010020926)	ENSBMSG00010020904	ENSBMSG00010020872	ENSBMSG00010020846	ENSBMSG00010020819	LRRTM1 (ENSBMSG00010020793)	CTNNA2 (ENSBMSG00010019658)	ENSBMSG00010019485	SUCLG1 (ENSBMSG00010019445) #17	DNAH6 (ENSBMSG00010018565) #18	ENSBMSG00010018427	TRABD2A (ENSBMSG00010018310) #19	TMSB10 (ENSBMSG00010018283) #20	KCMF1 (ENSBMSG00010018181) #21	TCF7L1 (ENSBMSG00010018055) #22	RETSAT (ENSBMSG00010018024) #27	ELMOD3 (ENSBMSG00010017999) #28	CAPG (ENSBMSG00010017946) #29	SH2D6 (ENSBMSG00010017841)	MAT2A (ENSBMSG00010017771) #32	GGCX (ENSBMSG00010017708) #33	VAMP8 (ENSBMSG00010017652) #34	VAMP5 (ENSBMSG00010017623)	RNF181 (ENSBMSG00010017562) #35	TMEM150A (ENSBMSG00010017376) #36	C2orf68 (ENSBMSG00010017326) #37	USP39 (ENSBMSG00010017135)	ENSBMSG00010017087	ENSBMSG00010017048	ATOH8 (ENSBMSG00010017024)
Odontoceti	ANCESTRAL SPECIES	15	ENSGT01100000263908.a	ENSGT00940000154909	ENSGT00940000154447.l	ENSGT00940000154447.k.a	ENSGT00940000154447.k.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000154519.d	ENSGT01000000219921	ENSGT00550000074828.a.g.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Sperm whale	MODERN SPECIES	3	ENSPCTG00005012465	ENSPCTG00005012493	ENSPCTG00005012595	CTNNA2 (ENSPCTG00005012688)	LRRTM1 (ENSPCTG00005013927)	ENSPCTG00005013963	ENSPCTG00005004062	ENSPCTG00005004086	ENSPCTG00005004098	SUCLG1 (ENSPCTG00005004109) #17	DNAH6 (ENSPCTG00005004145) #18	TRABD2A (ENSPCTG00005004187) #19	ENSPCTG00005004204	ENSPCTG00005004212	KCMF1 (ENSPCTG00005004240) #21	TCF7L1 (ENSPCTG00005004309) #22	ENSPCTG00005004338 #25	ENSPCTG00005004354 #27	GGCX (ENSPCTG00005004386) #33	USP39 (ENSPCTG00005004522)	SFTPB (ENSPCTG00005005068)	ATOH8 (ENSPCTG00005005238)	ST3GAL5 (ENSPCTG00005005262)	PTCD3 (ENSPCTG00005005329)	IMMT (ENSPCTG00005005442)	MRPL35 (ENSPCTG00005005655)	REEP1 (ENSPCTG00005005718)	KDM3A (ENSPCTG00005005939)	CHMP3 (ENSPCTG00005006017)	ENSPCTG00005006073	RNF103 (ENSPCTG00005006084)
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00390000000455.b	ENSGT01100000263908.a	ENSGT00940000154909	ENSGT00940000154447.l	ENSGT00940000154447.k.a	ENSGT00940000154447.k.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000154519.d	ENSGT01000000219921	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT01100000263908.a	ENSGT00940000154909	ENSGT00940000154447.l	ENSGT00940000154447.k.a	ENSGT00940000154447.k.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000154519.d	ENSGT01000000219921	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000165681.d	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Monodontidae	ANCESTRAL SPECIES	13	ENSGT00390000000455.b	ENSGT01100000263908.a	ENSGT00940000154909	ENSGT00940000154447.l	ENSGT00940000154447.k.a	ENSGT00940000154447.k.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000154519.d	ENSGT01000000219921	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000165681.d	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Beluga whale	MODERN SPECIES	61	GCFC2 (ENSDLEG00000021071)	ENSDLEG00000015271	LRRTM4 (ENSDLEG00000015285)	ENSDLEG00000015290	ENSDLEG00000015308	ENSDLEG00000015371	ENSDLEG00000015387	LRRTM1 (ENSDLEG00000015398)	CTNNA2 (ENSDLEG00000015448)	ENSDLEG00000015731	ENSDLEG00000015822	SUCLG1 (ENSDLEG00000015835) #17	DNAH6 (ENSDLEG00000015865) #18	ENSDLEG00000015940	KCMF1 (ENSDLEG00000015950) #21	TCF7L1 (ENSDLEG00000016012) #22	ENSDLEG00000016031 #25	RETSAT (ENSDLEG00000016040) #27	ELMOD3 (ENSDLEG00000016055) #28	CAPG (ENSDLEG00000016089) #29	ENSDLEG00000016109 #31	MAT2A (ENSDLEG00000016119) #32	GGCX (ENSDLEG00000016129) #33	VAMP8 (ENSDLEG00000016147) #34	VAMP5 (ENSDLEG00000016153)	RNF181 (ENSDLEG00000016163) #35	TMEM150A (ENSDLEG00000016207) #36	CUNH2orf68 (ENSDLEG00000016225) #37	USP39 (ENSDLEG00000016236)	ENSDLEG00000016291	ATOH8 (ENSDLEG00000016446)
Narwhal	MODERN SPECIES	305	ENSMMNG00015006860	ENSMMNG00015006837	ENSMMNG00015006817	LRRTM1 (ENSMMNG00015006791)	CTNNA2 (ENSMMNG00015006714)	ENSMMNG00015006649	ENSMMNG00015006629	ENSMMNG00015006585	ENSMMNG00015006568	ENSMMNG00015006559	SUCLG1 (ENSMMNG00015006541) #17	DNAH6 (ENSMMNG00015006430) #18	ENSMMNG00015006372	TMSB10 (ENSMMNG00015006357) #20	KCMF1 (ENSMMNG00015006344) #21	TCF7L1 (ENSMMNG00015006319) #22	ENSMMNG00015006302 #25	RETSAT (ENSMMNG00015006280) #27	ELMOD3 (ENSMMNG00015006250) #28	CAPG (ENSMMNG00015006216) #29	SH2D6 (ENSMMNG00015006178)	MAT2A (ENSMMNG00015006153) #32	GGCX (ENSMMNG00015006106) #33	VAMP8 (ENSMMNG00015006072) #34	VAMP5 (ENSMMNG00015006056)	RNF181 (ENSMMNG00015006028) #35	TMEM150A (ENSMMNG00015005993) #36	C2orf68 (ENSMMNG00015005970) #37	USP39 (ENSMMNG00015005861)	SFTPB (ENSMMNG00015005711)	ATOH8 (ENSMMNG00015005651)
Vaquita	MODERN SPECIES	4	MRPL19 (ENSPSNG00000017053)	LRRTM4 (ENSPSNG00000017131)	ENSPSNG00000017262	ENSPSNG00000017334	ENSPSNG00000017391	CTNNA2 (ENSPSNG00000017625)	LRRTM1 (ENSPSNG00000018662)	ENSPSNG00000007264	ENSPSNG00000007353	SUCLG1 (ENSPSNG00000007400) #17	DNAH6 (ENSPSNG00000007496) #18	TRABD2A (ENSPSNG00000007576) #19	ENSPSNG00000007617	TMSB10 (ENSPSNG00000007636) #20	KCMF1 (ENSPSNG00000007665) #21	TCF7L1 (ENSPSNG00000007696) #22	ENSPSNG00000007780 #25	RETSAT (ENSPSNG00000007803) #27	ELMOD3 (ENSPSNG00000007846) #28	CAPG (ENSPSNG00000007897) #29	SH2D6 (ENSPSNG00000007965)	MAT2A (ENSPSNG00000008074) #32	GGCX (ENSPSNG00000008137) #33	ENSPSNG00000008334	TMEM150A (ENSPSNG00000008402) #36	C2orf68 (ENSPSNG00000008473) #37	USP39 (ENSPSNG00000008572)	SFTPB (ENSPSNG00000008818)	ATOH8 (ENSPSNG00000009001)	ST3GAL5 (ENSPSNG00000009048)	ENSPSNG00000009166
Dolphin	MODERN SPECIES	1097																TCF7L1 (ENSTTRG00000008959) #22	RETSAT (ENSTTRG00000008962) #27	ENSTTRG00000008963 #28	CAPG (ENSTTRG00000008964) #29	ENSTTRG00000008965	MAT2A (ENSTTRG00000008966) #32	GGCX (ENSTTRG00000008967) #33	VAMP8 (ENSTTRG00000008968) #34	VAMP5 (ENSTTRG00000008969)	RNF181 (ENSTTRG00000008970) #35	TMEM150A (ENSTTRG00000008971) #36	C2orf68 (ENSTTRG00000008972) #37	USP39 (ENSTTRG00000008973)	SFTPB (ENSTTRG00000008974)
Pecora	ANCESTRAL SPECIES	5	ENSGT00390000009268.db.b	ENSGT00940000153408.B	ENSGT00940000158659	ENSGT00940000157344	ENSGT00390000004911	ENSGT00940000154909	ENSGT00390000017515.o.a	ENSGT00940000154447.j.a	ENSGT00940000154447.j.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975.b
Yarkand deer	MODERN SPECIES	2	XPO1 (ENSCHYG00000005634)	ENSCHYG00000005607	USP34 (ENSCHYG00000005246)	C2orf74 (ENSCHYG00000012074)	LRRTM4 (ENSCHYG00000011968)	ENSCHYG00000011927	ENSCHYG00000011811	ENSCHYG00000011728	LRRTM1 (ENSCHYG00000011698)	CTNNA2 (ENSCHYG00000011228)	ENSCHYG00000011081	SUCLG1 (ENSCHYG00000010947) #17	DNAH6 (ENSCHYG00000010726) #18	TMSB10 (ENSCHYG00000010662) #20	KCMF1 (ENSCHYG00000010620) #21	TCF7L1 (ENSCHYG00000010256) #22	ENSCHYG00000010219 #25	ENSCHYG00000010201	RETSAT (ENSCHYG00000010029) #27	ELMOD3 (ENSCHYG00000009802) #28	ENSCHYG00000009746 #29	ENSCHYG00000009409	MAT2A (ENSCHYG00000009334) #32	GGCX (ENSCHYG00000009020) #33	VAMP8 (ENSCHYG00000008959) #34	RNF181 (ENSCHYG00000008920) #35	TMEM150A (ENSCHYG00000008687) #36	C2orf68 (ENSCHYG00000008648) #37	USP39 (ENSCHYG00000008478)	SFTPB (ENSCHYG00000008422)	ENSCHYG00000008369
Percora_a	ANCESTRAL SPECIES	13	ENSGT00390000009268.db.b	ENSGT00940000153408.B	ENSGT00940000158659	ENSGT00940000157344	ENSGT00390000004911	ENSGT00940000154909	ENSGT00390000017515.o.a	ENSGT00940000154447.j.a	ENSGT00940000154447.j.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975.b
Siberian musk deer	MODERN SPECIES	243											ENSMMSG00000010974	SUCLG1 (ENSMMSG00000011015) #17	DNAH6 (ENSMMSG00000011077) #18	ENSMMSG00000011387	KCMF1 (ENSMMSG00000011415) #21	TCF7L1 (ENSMMSG00000011504) #22	ENSMMSG00000011551	RETSAT (ENSMMSG00000011571) #27	ELMOD3 (ENSMMSG00000011616) #28	CAPG (ENSMMSG00000011668) #29	SH2D6 (ENSMMSG00000011734)	ENSMMSG00000011818 #32	GGCX (ENSMMSG00000011896) #33	VAMP8 (ENSMMSG00000011993) #34	VAMP5 (ENSMMSG00000012013)	RNF181 (ENSMMSG00000012036) #35	TMEM150A (ENSMMSG00000012073) #36	C2orf68 (ENSMMSG00000012110) #37	USP39 (ENSMMSG00000012147)	SFTPB (ENSMMSG00000012359)	ENSMMSG00000012385
Bovidae	ANCESTRAL SPECIES	5	ENSGT00960000190232	ENSGT00940000153408.B	ENSGT00940000158659	ENSGT00940000157344	ENSGT00390000004911	ENSGT00940000154909	ENSGT00390000017515.o.a	ENSGT00940000154447.j.a	ENSGT00940000154447.j.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975.b
Caprinae	ANCESTRAL SPECIES	9	ENSGT00940000157824	ENSGT00960000190232	ENSGT00940000153408.B	ENSGT00940000158659	ENSGT00940000157344	ENSGT00390000004911	ENSGT00940000154909	ENSGT00390000018141.i.b.b.a.a	ENSGT00940000154447.j.a	ENSGT00940000154447.j.b	ENSGT00940000161705	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975.b
Goat	MODERN SPECIES	2	ENSCHIG00000018484	ENSCHIG00000017719	ENSCHIG00000026793	ENSCHIG00000025698	LRRTM1 (ENSCHIG00000008402)	ENSCHIG00000023681	ENSCHIG00000014730	ENSCHIG00000009879	ENSCHIG00000027191	SUCLG1 (ENSCHIG00000020517) #17	ENSCHIG00000025501 #18	ENSCHIG00000017397 #18	KCMF1 (ENSCHIG00000000578) #21	ENSCHIG00000009602	ENSCHIG00000009524	TCF7L1 (ENSCHIG00000010768) #22	ENSCHIG00000019585 #25	RETSAT (ENSCHIG00000007516) #27	ELMOD3 (ENSCHIG00000024857) #28	CAPG (ENSCHIG00000021024) #29	ENSCHIG00000009669	MAT2A (ENSCHIG00000026409) #32	GGCX (ENSCHIG00000014770) #33	VAMP8 (ENSCHIG00000016859) #34	VAMP5 (ENSCHIG00000026930)	RNF181 (ENSCHIG00000008537) #35	TMEM150A (ENSCHIG00000020450) #36	C2orf68 (ENSCHIG00000026643) #37	USP39 (ENSCHIG00000021013)	SFTPB (ENSCHIG00000025259)	ENSCHIG00000016379
Rambouillet Sheep	MODERN SPECIES	19	ENSOARG00020002275	ENSOARG00020002288	ENSOARG00020002295	ENSOARG00020002303	ENSOARG00020002315	ENSOARG00020002346	ENSOARG00020002369	CTNNA2 (ENSOARG00020002405)	LRRTM1 (ENSOARG00020002530)	ENSOARG00020002555	ENSOARG00020002597	SUCLG1 (ENSOARG00020002604) #17	DNAH6 (ENSOARG00020002647) #18	TMSB10 (ENSOARG00020002756) #20	KCMF1 (ENSOARG00020002774) #21	TCF7L1 (ENSOARG00020002813) #22	ENSOARG00020002845 #25	GGCX (ENSOARG00020002878) #33	ELMOD3 (ENSOARG00020002916) #28	CAPG (ENSOARG00020002936) #29	SH2D6 (ENSOARG00020002951)	MAT2A (ENSOARG00020002979) #32	ENSOARG00020002994 #34	VAMP5 (ENSOARG00020003011)	RNF181 (ENSOARG00020003033) #35	TMEM150A (ENSOARG00020003074) #36	C2orf68 (ENSOARG00020003094) #37	USP39 (ENSOARG00020003123)	SFTPB (ENSOARG00020003261)	ENSOARG00020003392	ENSOARG00020003492
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000158659	ENSGT00940000157344	ENSGT00390000004911	ENSGT00940000157562.f	ENSGT00940000154909	ENSGT00390000017515.o.a	ENSGT00940000154447.j.a	ENSGT00940000154447.j.b	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00390000010045.k.a.a.a.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975.b
American bison	MODERN SPECIES	3338												SUCLG1 (ENSBBBG00000020010) #17	DNAH6 (ENSBBBG00000019994) #18	TMSB10 (ENSBBBG00000019860) #20	ENSBBBG00000019847 #21	TCF7L1 (ENSBBBG00000019828) #22	ENSBBBG00000019799 #25	RETSAT (ENSBBBG00000019791) #27	ELMOD3 (ENSBBBG00000019773) #28	CAPG (ENSBBBG00000005165) #29	ENSBBBG00000019725	MAT2A (ENSBBBG00000019713) #32	GGCX (ENSBBBG00000019704) #33	VAMP8 (ENSBBBG00000007673) #34	VAMP5 (ENSBBBG00000019660)	RNF181 (ENSBBBG00000005186) #35	TMEM150A (ENSBBBG00000019657) #36	USP39 (ENSBBBG00000019591)	SFTPB (ENSBBBG00000005209)	ENSBBBG00000019476	ENSBBBG00000005222
Bos	ANCESTRAL SPECIES	5	ENSGT00940000153408.B	ENSGT00940000158659	ENSGT00940000157344	ENSGT00390000004911	ENSGT00940000157562.f	ENSGT00940000154909	ENSGT00390000017515.o.a	ENSGT00940000154447.j.a	ENSGT00940000154447.j.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975.b
Bos_a	ANCESTRAL SPECIES	6	ENSGT00940000153408.B	ENSGT00940000158659	ENSGT00940000157344	ENSGT00390000004911	ENSGT00940000157562.f	ENSGT00940000154909	ENSGT00390000017515.o.a	ENSGT00940000154447.j.a	ENSGT00940000154447.j.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975.b
Domestic yak	MODERN SPECIES	28	ENSBGRG00000007723	LRRTM4 (ENSBGRG00000007615)	ENSBGRG00000007589	ENSBGRG00000007421	ENSBGRG00000007342	ENSBGRG00000007147	LRRTM1 (ENSBGRG00000007126)	CTNNA2 (ENSBGRG00000006907)	ENSBGRG00000006853	ENSBGRG00000006831	SUCLG1 (ENSBGRG00000006774) #17	DNAH6 (ENSBGRG00000006436) #18	TMSB10 (ENSBGRG00000006399) #20	KCMF1 (ENSBGRG00000006294) #21	ENSBGRG00000006276	TCF7L1 (ENSBGRG00000006205) #22	ENSBGRG00000006196 #25	RETSAT (ENSBGRG00000006129) #27	ELMOD3 (ENSBGRG00000005978) #28	CAPG (ENSBGRG00000005930) #29	SH2D6 (ENSBGRG00000005852)	MAT2A (ENSBGRG00000005776) #32	GGCX (ENSBGRG00000005624) #33	VAMP8 (ENSBGRG00000005579) #34	VAMP5 (ENSBGRG00000005556)	RNF181 (ENSBGRG00000005520) #35	TMEM150A (ENSBGRG00000005475) #36	C2orf68 (ENSBGRG00000005435) #37	USP39 (ENSBGRG00000004978)	SFTPB (ENSBGRG00000004867)	ENSBGRG00000004844
Wild yak	MODERN SPECIES	422														TMSB10 (ENSBMUG00000025623) #20	KCMF1 (ENSBMUG00000025612) #21	TCF7L1 (ENSBMUG00000025596) #22	ENSBMUG00000025576 #25	RETSAT (ENSBMUG00000025572) #27	ELMOD3 (ENSBMUG00000025564) #28	CAPG (ENSBMUG00000025555) #29	ENSBMUG00000025549 #31	MAT2A (ENSBMUG00000025546) #32	GGCX (ENSBMUG00000025542) #33	VAMP8 (ENSBMUG00000025534) #34	VAMP5 (ENSBMUG00000025532)	RNF181 (ENSBMUG00000025527) #35	TMEM150A (ENSBMUG00000025520) #36	C2orf68 (ENSBMUG00000025510) #37	USP39 (ENSBMUG00000025495)	SFTPB (ENSBMUG00000025482)	ENSBMUG00000025477
Bos_b	ANCESTRAL SPECIES	16	ENSGT00940000157344	ENSGT00390000004911	ENSGT00940000157562.f	ENSGT00940000154909	ENSGT00390000017515.o.a	ENSGT00940000154447.j.a	ENSGT00940000154447.j.b	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT01100000263508.B.a.b.b.b	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000165681	ENSGT01100000263481.n.a.a.a.b.b.b.a.a.a.b.a.b	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00390000002975.b
Hybrid Bos Indicus	MODERN SPECIES	2	ENSBIXG00005010786	LRRTM4 (ENSBIXG00005010829)	ENSBIXG00005010871	ENSBIXG00005010928	ENSBIXG00005010995	LRRTM1 (ENSBIXG00005001004)	ENSBIXG00005011042	CTNNA2 (ENSBIXG00005011207)	ENSBIXG00005011272	SUCLG1 (ENSBIXG00005005699) #17	DNAH6 (ENSBIXG00005011481) #18	ENSBIXG00005011532	ENSBIXG00005001125	ENSBIXG00005011559	KCMF1 (ENSBIXG00005011582) #21	TCF7L1 (ENSBIXG00005011607) #22	ENSBIXG00005011629 #25	RETSAT (ENSBIXG00005001146) #27	ELMOD3 (ENSBIXG00005011661) #28	CAPG (ENSBIXG00005011729) #29	ENSBIXG00005011750	MAT2A (ENSBIXG00005011796) #32	GGCX (ENSBIXG00005011842) #33	VAMP8 (ENSBIXG00005011878) #34	VAMP5 (ENSBIXG00005001186)	RNF181 (ENSBIXG00005011916) #35	TMEM150A (ENSBIXG00005011956) #36	C2orf68 (ENSBIXG00005011982) #37	USP39 (ENSBIXG00005012067)	SFTPB (ENSBIXG00005012111)	ENSBIXG00005012133
Cow	MODERN SPECIES	2	AHSA2 (ENSBTAG00000006025)	C11H2orf74 (ENSBTAG00000047149)	LRRTM4 (ENSBTAG00000000374)	ENSBTAG00000000168	REG3A (ENSBTAG00000011314)	REG3G (ENSBTAG00000007135)	LRRTM1 (ENSBTAG00000054157)	CTNNA2 (ENSBTAG00000031669)	ENSBTAG00000050900	SUCLG1 (ENSBTAG00000006075) #17	DNAH6 (ENSBTAG00000049566) #18	TMSB10 (ENSBTAG00000005654)	ENSBTAG00000048762	KCMF1 (ENSBTAG00000020630) #21	HIGD1A (ENSBTAG00000031731)	TCF7L1 (ENSBTAG00000010111) #22	ENSBTAG00000038116 #25	RETSAT (ENSBTAG00000021934) #27	ELMOD3 (ENSBTAG00000021935) #28	CAPG (ENSBTAG00000005432) #29	ENSBTAG00000048587	MAT2A (ENSBTAG00000020873) #32	GGCX (ENSBTAG00000038477) #33	VAMP8 (ENSBTAG00000023997) #34	VAMP5 (ENSBTAG00000018285)	RNF181 (ENSBTAG00000018286) #35	TMEM150A (ENSBTAG00000018289) #36	C11H2orf68 (ENSBTAG00000018291) #37	USP39 (ENSBTAG00000010691)	SFTPB (ENSBTAG00000021230)	ENSBTAG00000031828
Atlantogenata	ANCESTRAL SPECIES	98												ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Xenarthra	ANCESTRAL SPECIES	240															ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711
Sloth	MODERN SPECIES	4208																ENSCHOG00000003739 #22
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	2543															KCMF1 (ENSDNOG00000047192) #21	ENSDNOG00000038220 #22
Armadillo	MODERN SPECIES	344																ENSDNOG00000035009 #22	ENSDNOG00000046253 #25	RETSAT (ENSDNOG00000035880) #27	ELMOD3 (ENSDNOG00000006657) #28	CAPG (ENSDNOG00000019583) #29	MAT2A (ENSDNOG00000033164) #32	GGCX (ENSDNOG00000008326) #33	VAMP8 (ENSDNOG00000044201) #34	VAMP5 (ENSDNOG00000039900)	RNF181 (ENSDNOG00000011353) #35	TMEM150A (ENSDNOG00000033208) #36	USP39 (ENSDNOG00000034517)	SFTPB (ENSDNOG00000043019)	ENSDNOG00000024234	ATOH8 (ENSDNOG00000047321)
Afrotheria	ANCESTRAL SPECIES	119												ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Tenrec	MODERN SPECIES	4589																ENSETEG00000018020 #22
Afrotheria_a	ANCESTRAL SPECIES	121												ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613 #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37	ENSGT00390000007992	ENSGT00940000161711	ENSGT00940000161151
Hyrax	MODERN SPECIES	3864																TCF7L1 (ENSPCAG00000011792) #22
Elephant	MODERN SPECIES	589											ENSLAFG00000031540	SUCLG1 (ENSLAFG00000014517) #17	DNAH6 (ENSLAFG00000009483) #18	TMSB10 (ENSLAFG00000021694) #20	KCMF1 (ENSLAFG00000018643) #21	TCF7L1 (ENSLAFG00000016275) #22	ENSLAFG00000005443 #25	RETSAT (ENSLAFG00000016282) #27	ELMOD3 (ENSLAFG00000016291) #28	CAPG (ENSLAFG00000016295) #29	ENSLAFG00000021536	MAT2A (ENSLAFG00000018042) #32	GGCX (ENSLAFG00000018045) #33	VAMP8 (ENSLAFG00000001520) #34	VAMP5 (ENSLAFG00000021786)	RNF181 (ENSLAFG00000021776) #35	TMEM150A (ENSLAFG00000018054) #36	C2orf68 (ENSLAFG00000023236) #37	USP39 (ENSLAFG00000011741)	SFTPB (ENSLAFG00000015010)	ATOH8 (ENSLAFG00000027790)
Marsupialia	ANCESTRAL SPECIES	26	ENSGT00390000013178	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT01030000234543.A.a.lb	ENSGT01030000234543.A.a.kb.b	ENSGT00940000161705	ENSGT01030000234543.A.a.kb.a	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613.t #27	ENSGT00390000017613.s #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000176261	ENSGT00940000168353	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37
Marsupialia_b	ANCESTRAL SPECIES	23	ENSGT00390000013178	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT01030000234543.A.a.kb.b	ENSGT00940000161705	ENSGT01030000234543.A.a.kb.a	ENSGT00390000010165.i.b.b.b	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000162805 #19	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613.t #27	ENSGT00390000017613.s #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000176261	ENSGT00940000168353	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37
Diprotodontia	ANCESTRAL SPECIES	35	ENSGT00940000158524	ENSGT00390000013178	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT01030000234543.A.a.kb.b	ENSGT00940000161705	ENSGT01030000234543.A.a.kb.a	ENSGT00390000010165.i.b.b.b	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613.t #27	ENSGT00390000017613.s #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000176261	ENSGT00940000168353	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37
Diprotodontia_a	ANCESTRAL SPECIES	34	ENSGT00940000158524	ENSGT00390000013178	ENSGT00510000049120	ENSGT00940000157626	ENSGT00940000159443	ENSGT00940000157511	ENSGT00940000160795	ENSGT01030000234543.A.a.kb.b	ENSGT00940000161705	ENSGT01030000234543.A.a.kb.a	ENSGT00390000010165.i.b.b.b	ENSGT00940000156351 #17	ENSGT00940000154761 #18	ENSGT00940000163007 #20	ENSGT00510000047171 #21	ENSGT00940000157038 #22	ENSGT00530000064712 #25	ENSGT00390000017613.t #27	ENSGT00390000017613.s #27	ENSGT00390000009488 #28	ENSGT00940000159305 #29	ENSGT00940000162822	ENSGT00950000183185.c.a.a #32	ENSGT00390000014909 #33	ENSGT00940000160325.b #34	ENSGT00730000111371	ENSGT00940000176261	ENSGT00940000168353	ENSGT00940000160552 #35	ENSGT01030000234578.A.b.a.a.b #36	ENSGT00390000001901 #37
koala	MODERN SPECIES	191							ENSPCIG00000032459	ENSPCIG00000035571	ENSPCIG00000024440	SUCLG1 (ENSPCIG00000009929) #17	DNAH6 (ENSPCIG00000009910) #18	ENSPCIG00000009925	TRABD2A (ENSPCIG00000009900) #19	TMSB10 (ENSPCIG00000035096) #20	KCMF1 (ENSPCIG00000009893) #21	TCF7L1 (ENSPCIG00000006486) #22	ENSPCIG00000034125 #25	ENSPCIG00000010251 #27	ENSPCIG00000004280	ENSPCIG00000025073	ENSPCIG00000032043 #27	ELMOD3 (ENSPCIG00000007453) #28	CAPG (ENSPCIG00000007456) #29	ENSPCIG00000009164	MAT2A (ENSPCIG00000004154) #32	GGCX (ENSPCIG00000004155) #33	VAMP8 (ENSPCIG00000031421) #34	VAMP5 (ENSPCIG00000032905)	ENSPCIG00000004174	TMEM150A (ENSPCIG00000004183) #36	C2orf68 (ENSPCIG00000004192) #37
Common wonbat	MODERN SPECIES	1167	ENSVURG00010012241	RNF24 (ENSVURG00010012232)	SMOX (ENSVURG00010012225)	ADRA1D (ENSVURG00010012170)	ENSVURG00010012151	LRRTM1 (ENSVURG00010012146)	ENSVURG00010012111	ENSVURG00010012097	ENSVURG00010012088	SUCLG1 (ENSVURG00010012078) #17	ENSVURG00010012074	ENSVURG00010012065	ENSVURG00010011932 #18	TMSB10 (ENSVURG00010011895) #20	KCMF1 (ENSVURG00010011880) #21	TCF7L1 (ENSVURG00010011834) #22	ENSVURG00010011818 #25	ENSVURG00010011586 #27
Wallaby	MODERN SPECIES	5829																TCF7L1 (ENSMEUG00000014957) #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000013681	ENSSHAG00000013753	PANK2 (ENSSHAG00000027374)	SMOX (ENSSHAG00000016889)	ENSSHAG00000031546	ENSSHAG00000015418	ENSSHAG00000013943	ENSSHAG00000030114	ENSSHAG00000027093	ENSSHAG00000024197	SUCLG1 (ENSSHAG00000004981) #17	DNAH6 (ENSSHAG00000000475) #18	TRABD2A (ENSSHAG00000010584) #19	ENSSHAG00000030238	KCMF1 (ENSSHAG00000009198) #21	TCF7L1 (ENSSHAG00000006659) #22	ENSSHAG00000030894 #25	ENSSHAG00000026447 #27	ENSSHAG00000005344 #27	ENSSHAG00000004885 #28	CAPG (ENSSHAG00000004491) #29	ENSSHAG00000031524	MAT2A (ENSSHAG00000025075) #32	GGCX (ENSSHAG00000023998) #33	ENSSHAG00000032378 #34	VAMP5 (ENSSHAG00000016279)	ENSSHAG00000022364 #35	TMEM150A (ENSSHAG00000016184) #36	C2orf68 (ENSSHAG00000024656) #37	USP39 (ENSSHAG00000016049)	ENSSHAG00000015982
Opossum	MODERN SPECIES		ENSMODG00000045052	SMOX (ENSMODG00000015449)	ADRA1D (ENSMODG00000015450)	ENSMODG00000039697	ENSMODG00000039380	LRRTM1 (ENSMODG00000023036)	ENSMODG00000015456	ENSMODG00000040994	ENSMODG00000039841	SUCLG1 (ENSMODG00000015485) #17	ENSMODG00000046451	DNAH6 (ENSMODG00000015555) #18	TRABD2A (ENSMODG00000015560) #19	TMSB10 (ENSMODG00000037498) #20	KCMF1 (ENSMODG00000015567) #21	TCF7L1 (ENSMODG00000015573) #22	ENSMODG00000039529 #27	ENSMODG00000042124	ENSMODG00000038085 #25	ENSMODG00000050755	ENSMODG00000023038	ENSMODG00000023037	ENSMODG00000015593 #27	ELMOD3 (ENSMODG00000015595) #28	CAPG (ENSMODG00000015599) #29	MAT2A (ENSMODG00000015604) #32	GGCX (ENSMODG00000015606) #33	VAMP8 (ENSMODG00000015607) #34	ENSMODG00000050911	ENSMODG00000047247	RNF181 (ENSMODG00000015616) #35