Eutheria	ANCESTRAL SPECIES	26	ENSGT00940000160633	ENSGT00940000163449	ENSGT00940000159951	ENSGT00940000163033	ENSGT00390000018199.b.b.b	ENSGT01090000260076.b.b	ENSGT00940000155485	ENSGT00940000164194	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a	ENSGT00940000159499	ENSGT00940000154342.C	ENSGT00530000063484.b.b	ENSGT00940000158538	ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000160244	ENSGT00940000155009	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000156153	ENSGT00500000044890.a.a	ENSGT00940000153737.b	ENSGT00390000008856
Boreoeutheria	ANCESTRAL SPECIES	11	ENSGT00940000163033.a.a	ENSGT00390000018199.b.b.b	ENSGT00950000182900.D.d.b	ENSGT00940000163797.a.b	ENSGT00940000167876	ENSGT01090000260076.b.b	ENSGT00940000155485	ENSGT00940000164194	ENSGT00940000166106	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a	ENSGT00940000159499	ENSGT00940000165498	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a	ENSGT00530000063484.b.b	ENSGT00940000158538	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00950000183442	ENSGT00940000162825	ENSGT00940000159699	ENSGT00940000163254	ENSGT00940000163202	ENSGT00940000162492	ENSGT00940000160244	ENSGT00940000155009
Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT00940000163033.b	ENSGT00390000018199.b.b.b	ENSGT00950000182900.D.d.b	ENSGT00940000163797.a.b	ENSGT00940000167876	ENSGT00940000165324	ENSGT01090000260076.b.b	ENSGT00940000164194	ENSGT00940000155485	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a	ENSGT00940000159499	ENSGT00940000165498	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00530000063484.b.b	ENSGT00950000183442	ENSGT00940000162825	ENSGT00940000159699	ENSGT00940000163254	ENSGT00940000163202	ENSGT00940000158538	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000160244	ENSGT00940000155009	ENSGT00390000015623
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00860000135966	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Glires	ANCESTRAL SPECIES	3	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00860000135966	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00860000135966	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00860000135966	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00860000135966	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Muroidea	ANCESTRAL SPECIES		ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00860000135966	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00860000135966	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00860000135966	ENSGT00940000160433 #27	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37	ENSGT00390000009925.b
Mus	ANCESTRAL SPECIES	2	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00860000135587 #17	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00940000170233 #23	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00860000135966	ENSGT00940000160433 #27	ENSGT00900000143652 #29	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36
Shrew mouse	MODERN SPECIES	5	Tha1 (MGP_PahariEiJ_G0018602) #7	Tmem235 (MGP_PahariEiJ_G0018601) #8	Birc5 (MGP_PahariEiJ_G0018600) #9	MGP_PahariEiJ_G0018599 #10	Tk1 (MGP_PahariEiJ_G0018598) #11	Syngr2 (MGP_PahariEiJ_G0018597) #12	6030468B19Rik (MGP_PahariEiJ_G0018596) #13	Tmc8 (MGP_PahariEiJ_G0018595) #14	Tmc6 (MGP_PahariEiJ_G0018594) #15	Tnrc6c (MGP_PahariEiJ_G0018593) #16	MGP_PahariEiJ_G0018592 #17	Septin9 (MGP_PahariEiJ_G0018591) #18	Sec14l1 (MGP_PahariEiJ_G0018590) #19	Mgat5b (MGP_PahariEiJ_G0018589) #20	Mfsd11 (MGP_PahariEiJ_G0018588) #21	Srsf2 (MGP_PahariEiJ_G0018587) #22	MGP_PahariEiJ_G0018586 #23	Jmjd6 (MGP_PahariEiJ_G0018585) #24	Mxra7 (MGP_PahariEiJ_G0018584) #25	St6galnac1 (MGP_PahariEiJ_G0018583) #26	St6galnac2 (MGP_PahariEiJ_G0018582) #27	MGP_PahariEiJ_G0018581 #28	MGP_PahariEiJ_G0018580 #29	Cygb (MGP_PahariEiJ_G0018579) #30	Rhbdf2 (MGP_PahariEiJ_G0018578) #31	Aanat (MGP_PahariEiJ_G0018577) #32	Ube2o (MGP_PahariEiJ_G0018576) #33	Sphk1 (MGP_PahariEiJ_G0018575) #34	Prpsap1 (MGP_PahariEiJ_G0018574) #35	MGP_PahariEiJ_G0018573 #36	MGP_PahariEiJ_G0018572 #37
Mus_A	ANCESTRAL SPECIES	2	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT00860000135913	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00860000135587 #17	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00940000170233 #23	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00860000135966	ENSGT00940000160433 #27	ENSGT00860000136166	ENSGT00900000143652 #29	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT00860000135913	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00860000135587 #17	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00860000135966	ENSGT00940000160433 #27	ENSGT00860000136166	ENSGT00900000143652 #29	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36
Mouse	MODERN SPECIES	2	Tha1 (ENSMUSG00000017713) #7	Tmem235 (ENSMUSG00000070330) #8	Birc5 (ENSMUSG00000017716) #9	Afmid (ENSMUSG00000017718) #10	Tk1 (ENSMUSG00000025574) #11	Gm20708 (ENSMUSG00000093485)	Syngr2 (ENSMUSG00000048277) #12	6030468B19Rik (ENSMUSG00000025573) #13	Tmc8 (ENSMUSG00000050106) #14	Tmc6 (ENSMUSG00000025572) #15	Tnrc6c (ENSMUSG00000025571) #16	Septin9 (ENSMUSG00000059248) #18	Sec14l1 (ENSMUSG00000020823) #19	Mgat5b (ENSMUSG00000043857) #20	Mfsd11 (ENSMUSG00000020818) #21	Srsf2 (ENSMUSG00000034120) #22	Mettl23 (ENSMUSG00000090266)	Jmjd6 (ENSMUSG00000056962) #24	Mxra7 (ENSMUSG00000020814) #25	St6galnac1 (ENSMUSG00000009588) #26	St6galnac2 (ENSMUSG00000110170)	St6galnac2 (ENSMUSG00000057286) #27	Prcd (ENSMUSG00000075410) #29	Cygb (ENSMUSG00000020810) #30	Rhbdf2 (ENSMUSG00000020806) #31	Aanat (ENSMUSG00000020804) #32	Ube2o (ENSMUSG00000020802) #33	Sphk1 (ENSMUSG00000061878) #34	Prpsap1 (ENSMUSG00000015869) #35	Qrich2 (ENSMUSG00000070331) #36	Ubald2 (ENSMUSG00000050628) #37
Mus_C	ANCESTRAL SPECIES	21	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT00860000135913	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00860000135587 #17	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00860000136166	ENSGT00960000191568	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b.z.b #37
Steppe mouse	MODERN SPECIES	2791						Tmc8 (ENSMSIG00000000869) #14	Tmc6 (ENSMSIG00000000827) #15	Tnrc6c (ENSMSIG00000000549) #16	ENSMSIG00000000495 #17	ENSMSIG00000000460	ENSMSIG00000000431	Septin9 (ENSMSIG00000000263) #18	Sec14l1 (ENSMSIG00000000119) #19	Mgat5b (ENSMSIG00000026514) #20	Mfsd11 (ENSMSIG00000026484) #21	Srsf2 (ENSMSIG00000026470) #22	ENSMSIG00000026456	Jmjd6 (ENSMSIG00000026419) #24
spretus	MODERN SPECIES	2	Tmem235 (MGP_SPRETEiJ_G0018318) #8	Birc5 (MGP_SPRETEiJ_G0018317) #9	Afmid (MGP_SPRETEiJ_G0018316) #10	Tk1 (MGP_SPRETEiJ_G0018315) #11	Syngr2 (MGP_SPRETEiJ_G0018314) #12	MGP_SPRETEiJ_G0018313	6030468B19Rik (MGP_SPRETEiJ_G0018312) #13	Tmc8 (MGP_SPRETEiJ_G0018311) #14	Tmc6 (MGP_SPRETEiJ_G0018310) #15	Tnrc6c (MGP_SPRETEiJ_G0018309) #16	MGP_SPRETEiJ_G0018308 #17	Septin9 (MGP_SPRETEiJ_G0018307) #18	Sec14l1 (MGP_SPRETEiJ_G0018306) #19	Mgat5b (MGP_SPRETEiJ_G0018305) #20	Mfsd11 (MGP_SPRETEiJ_G0018304) #21	Srsf2 (MGP_SPRETEiJ_G0018303) #22	Mettl23 (MGP_SPRETEiJ_G0018302)	Jmjd6 (MGP_SPRETEiJ_G0018301) #24	Mxra7 (MGP_SPRETEiJ_G0018300) #25	St6galnac1 (MGP_SPRETEiJ_G0018299) #26	St6galnac2 (MGP_SPRETEiJ_G0018298) #27	MGP_SPRETEiJ_G0018297	MGP_SPRETEiJ_G0018296	Cygb (MGP_SPRETEiJ_G0018295) #30	Rhbdf2 (MGP_SPRETEiJ_G0018294) #31	Ube2o (MGP_SPRETEiJ_G0018292) #33	Sphk1 (MGP_SPRETEiJ_G0018291) #34	Prpsap1 (MGP_SPRETEiJ_G0018290) #35	MGP_SPRETEiJ_G0018289 #36	MGP_SPRETEiJ_G0018288 #37	MGP_SPRETEiJ_G0018287 #37
Ryukyu mouse	MODERN SPECIES	2	Afmid (MGP_CAROLIEiJ_G0017472) #10	Tk1 (MGP_CAROLIEiJ_G0017471) #11	MGP_CAROLIEiJ_G0017470	Syngr2 (MGP_CAROLIEiJ_G0017469) #12	6030468B19Rik (MGP_CAROLIEiJ_G0017468) #13	Tmc8 (MGP_CAROLIEiJ_G0017467) #14	Tmc6 (MGP_CAROLIEiJ_G0017466) #15	Tnrc6c (MGP_CAROLIEiJ_G0017465) #16	MGP_CAROLIEiJ_G0017464 #17	Septin9 (MGP_CAROLIEiJ_G0017463) #18	Sec14l1 (MGP_CAROLIEiJ_G0017462) #19	MGP_CAROLIEiJ_G0017461	MGP_CAROLIEiJ_G0017460	Mgat5b (MGP_CAROLIEiJ_G0017459) #20	Mfsd11 (MGP_CAROLIEiJ_G0017458) #21	Srsf2 (MGP_CAROLIEiJ_G0017457) #22	MGP_CAROLIEiJ_G0017456 #23	Jmjd6 (MGP_CAROLIEiJ_G0017455) #24	Mxra7 (MGP_CAROLIEiJ_G0017454) #25	St6galnac2 (MGP_CAROLIEiJ_G0017453) #27	MGP_CAROLIEiJ_G0017452	MGP_CAROLIEiJ_G0017451 #29	Cygb (MGP_CAROLIEiJ_G0017450) #30	Rhbdf2 (MGP_CAROLIEiJ_G0017449) #31	MGP_CAROLIEiJ_G0017448 #32	Ube2o (MGP_CAROLIEiJ_G0017447) #33	Sphk1 (MGP_CAROLIEiJ_G0017446) #34	Prpsap1 (MGP_CAROLIEiJ_G0017445) #35	MGP_CAROLIEiJ_G0017444 #36	MGP_CAROLIEiJ_G0017443 #37	MGP_CAROLIEiJ_G0017442 #37
Rat	DUPLICATION
Rat	MODERN SPECIES	1	Socs3 (ENSRNOG00000063373)	Tha1 (ENSRNOG00000045615) #7	Tmem235 (ENSRNOG00000048231) #8	Birc5 (ENSRNOG00000050819) #9	Afmid (ENSRNOG00000050205) #10	Tk1 (ENSRNOG00000047314) #11	Syngr2 (ENSRNOG00000050547) #12	LOC688282 (ENSRNOG00000045889) #13	Tmc8 (ENSRNOG00000046086) #14	Tmc6 (ENSRNOG00000053469) #15	Tnrc6c (ENSRNOG00000022395) #16	Septin9 (ENSRNOG00000002807) #18	Sec14l1 (ENSRNOG00000002722) #19	Mgat5b (ENSRNOG00000024954) #20	Mfsd11 (ENSRNOG00000000247) #21	Srsf2 (ENSRNOG00000000248) #22	Mettl23 (ENSRNOG00000000249)	Jmjd6 (ENSRNOG00000000250) #24	Mxra7 (ENSRNOG00000042915)	St6galnac1 (ENSRNOG00000000251) #26	St6galnac2 (ENSRNOG00000012083) #27	St6galnac2 (ENSRNOG00000065011)	Cygb (ENSRNOG00000011541) #30	Rhbdf2 (ENSRNOG00000011459) #31	Aanat (ENSRNOG00000011182) #32	AABR07072207.1 (ENSRNOG00000011155)	Ube2o (ENSRNOG00000011007) #33	Sphk1 (ENSRNOG00000010626) #34	Prpsap1 (ENSRNOG00000010083) #35	Qrich2 (ENSRNOG00000025254) #36	Ubald2 (ENSRNOG00000066106) #37
Rat	MODERN SPECIES	46	Mageb3 (ENSRNOG00000038269)	Rab1b (ENSRNOG00000050510)	Mageb2 (ENSRNOG00000028179)	Nr0b1 (ENSRNOG00000003765)	Samt3 (ENSRNOG00000029010)	Tasl (ENSRNOG00000003748)	ENSRNOG00000038299	Gk (ENSRNOG00000034116)	Tab3 (ENSRNOG00000003643)	Fthl17e (ENSRNOG00000003783)	LOC102549011 (ENSRNOG00000050178)	Dmd (ENSRNOG00000046366)	ENSRNOG00000070004	AABR07038477.1 (ENSRNOG00000038369)	AABR07038464.1 (ENSRNOG00000061492)	Srsf8 (ENSRNOG00000048925) #22	Tmem47 (ENSRNOG00000030418)	Da2-19 (ENSRNOG00000032739)	Mageb16 (ENSRNOG00000029408)	Cfap47 (ENSRNOG00000030048)	Fam47a (ENSRNOG00000003836)	ENSRNOG00000064865	Prrg1 (ENSRNOG00000026044)	RGD1563378 (ENSRNOG00000067596)	Pnpla4 (ENSRNOG00000026157)	Sts (ENSRNOG00000032487)	Ptges3l1 (ENSRNOG00000060486)	Magea4 (ENSRNOG00000062420)	Obp1f (ENSRNOG00000062551)	Obp1f (ENSRNOG00000063224)	Pbsn (ENSRNOG00000003713)
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37	ENSGT00390000009925.b
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37	ENSGT00390000009925.b
Golden Hamster	MODERN SPECIES	637	Tha1 (ENSMAUG00000017293) #7	Tmem235 (ENSMAUG00000018596) #8	Birc5 (ENSMAUG00000021983) #9	Afmid (ENSMAUG00000022239) #10	ENSMAUG00000020961 #11	Syngr2 (ENSMAUG00000020436) #12	6030468B19Rik (ENSMAUG00000021499) #13	Tmc8 (ENSMAUG00000022139) #14	Tmc6 (ENSMAUG00000022231) #15	Tnrc6c (ENSMAUG00000021618) #16	Septin9 (ENSMAUG00000021555) #18	ENSMAUG00000001914 #19	ENSMAUG00000018281	Mgat5b (ENSMAUG00000022211) #20	Mfsd11 (ENSMAUG00000002082) #21	Srsf2 (ENSMAUG00000022242) #22	Mettl23 (ENSMAUG00000001468)	Jmjd6 (ENSMAUG00000011301) #24	Mxra7 (ENSMAUG00000011987) #25	St6galnac1 (ENSMAUG00000007479) #26	St6galnac2 (ENSMAUG00000008031) #27	ENSMAUG00000005169	Cygb (ENSMAUG00000007376) #30	Rhbdf2 (ENSMAUG00000015072) #31	Aanat (ENSMAUG00000022225) #32	Ube2o (ENSMAUG00000009861) #33	Sphk1 (ENSMAUG00000010100) #34	Prpsap1 (ENSMAUG00000014460) #35	ENSMAUG00000001509 #36	Ubald2 (ENSMAUG00000011336) #37	Rnf157 (ENSMAUG00000014069)
Chinese hamster chok1gshd	MODERN SPECIES	33	Socs3 (ENSCGRG00001002299)	Tha1 (ENSCGRG00001015743) #7	Tmem235 (ENSCGRG00001003448) #8	ENSCGRG00001024015 #9	Afmid (ENSCGRG00001014003) #10	TK1 (ENSCGRG00001018904) #11	Syngr2 (ENSCGRG00001011646) #12	6030468B19Rik (ENSCGRG00001002193) #13	Tmc8 (ENSCGRG00001023341) #14	Tmc6 (ENSCGRG00001003665) #15	Tnrc6c (ENSCGRG00001022686) #16	Septin9 (ENSCGRG00001008836) #18	Sec14l1 (ENSCGRG00001017968) #19	Mgat5b (ENSCGRG00001004558) #20	Mfsd11 (ENSCGRG00001020193) #21	Srsf2 (ENSCGRG00001023483) #22	Mettl23 (ENSCGRG00001023289)	Jmjd6 (ENSCGRG00001018648) #24	Mxra7 (ENSCGRG00001017342) #25	St6galnac1 (ENSCGRG00001010902) #26	St6galnac2 (ENSCGRG00001014926) #27	ENSCGRG00001008697	Cygb (ENSCGRG00001000221) #30	Rhbdf2 (ENSCGRG00001009552) #31	Aanat (ENSCGRG00001003875) #32	Ube2o (ENSCGRG00001001374) #33	Sphk1 (ENSCGRG00001021094) #34	Prpsap1 (ENSCGRG00001003249) #35	ENSCGRG00001011718 #36	ENSCGRG00001017983 #37	Rnf157 (ENSCGRG00001012168)
Upper Galilee mountains blind mole rat	MODERN SPECIES	626												Septin9 (ENSNGAG00000003716) #18	Sec14l1 (ENSNGAG00000010327) #19	Mgat5b (ENSNGAG00000002427) #20	Mfsd11 (ENSNGAG00000022723) #21	Srsf2 (ENSNGAG00000021718) #22	Mettl23 (ENSNGAG00000016672)	Jmjd6 (ENSNGAG00000011471) #24	Mxra7 (ENSNGAG00000001136) #25
Lesser Egyptian jerboa	MODERN SPECIES	56	Dnah17 (ENSJJAG00000022480)	Pgs1 (ENSJJAG00000014947)	Socs3 (ENSJJAG00000005819)	Tmem235 (ENSJJAG00000015038) #8	Afmid (ENSJJAG00000012806) #10	Tk1 (ENSJJAG00000014243) #11	Syngr2 (ENSJJAG00000015399) #12	6030468B19Rik (ENSJJAG00000013183) #13	Tmc8 (ENSJJAG00000014418) #14	Tmc6 (ENSJJAG00000013911) #15	Tnrc6c (ENSJJAG00000017055) #16	Septin9 (ENSJJAG00000015931) #18	Sec14l1 (ENSJJAG00000014775) #19	Mgat5b (ENSJJAG00000013209) #20	Mfsd11 (ENSJJAG00000013159) #21	Srsf2 (ENSJJAG00000013794) #22	Mettl23 (ENSJJAG00000012888)	Jmjd6 (ENSJJAG00000022867) #24	Mxra7 (ENSJJAG00000012046) #25	St6galnac1 (ENSJJAG00000014221) #26	St6galnac2 (ENSJJAG00000011713) #27	ENSJJAG00000012685	Cygb (ENSJJAG00000011929) #30	Rhbdf2 (ENSJJAG00000015188) #31	Aanat (ENSJJAG00000014079) #32	Ube2o (ENSJJAG00000017585) #33	Sphk1 (ENSJJAG00000011613) #34	Prpsap1 (ENSJJAG00000013347) #35	ENSJJAG00000012321 #36	Ubald2 (ENSJJAG00000013411) #37	Rnf157 (ENSJJAG00000013446)
Kangaroo rat	MODERN SPECIES	326	Pgs1 (ENSDORG00000011674)	Socs3 (ENSDORG00000015512)	Tha1 (ENSDORG00000025578) #7	Birc5 (ENSDORG00000004314) #9	Afmid (ENSDORG00000012803) #10	Tk1 (ENSDORG00000012808) #11	Syngr2 (ENSDORG00000012812) #12	6030468B19Rik (ENSDORG00000006702) #13	Tmc8 (ENSDORG00000006694) #14	ENSDORG00000026735 #15	Tnrc6c (ENSDORG00000004558) #16	Septin9 (ENSDORG00000028516) #18	Sec14l1 (ENSDORG00000007026) #19	Mgat5b (ENSDORG00000012956) #20	Mfsd11 (ENSDORG00000014461) #21	Srsf2 (ENSDORG00000014460) #22	Mettl23 (ENSDORG00000014458)	Jmjd6 (ENSDORG00000014457) #24	ENSDORG00000027007 #25	ENSDORG00000010250 #26	St6galnac2 (ENSDORG00000027435) #27	St6galnac2 (ENSDORG00000030185)	ENSDORG00000030232	Cygb (ENSDORG00000010590) #30	Rhbdf2 (ENSDORG00000010588) #31	Aanat (ENSDORG00000010586) #32	Ube2o (ENSDORG00000010584) #33	Sphk1 (ENSDORG00000027300) #34	Prpsap1 (ENSDORG00000008903) #35	ENSDORG00000024744 #36	Ubald2 (ENSDORG00000008900) #37
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00860000135966	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Hystricomorpha	ANCESTRAL SPECIES	24	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00860000135966	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Hystricomorpha_a	ANCESTRAL SPECIES	19	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37	ENSGT00390000009925.b
Hystricomorpha_b	ANCESTRAL SPECIES	12	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37	ENSGT00390000009925.b
Long-tailed chinchilla	MODERN SPECIES	213	ENSCLAG00000014687	ENSCLAG00000010325 #7	TMEM235 (ENSCLAG00000010882) #8	BIRC5 (ENSCLAG00000011970) #9	AFMID (ENSCLAG00000012562) #10	TK1 (ENSCLAG00000008258) #11	SYNGR2 (ENSCLAG00000008491) #12	ENSCLAG00000011725 #13	TMC8 (ENSCLAG00000012843) #14	TMC6 (ENSCLAG00000015028) #15	TNRC6C (ENSCLAG00000011139) #16	SEPTIN9 (ENSCLAG00000016684) #18	SEC14L1 (ENSCLAG00000017271) #19	MGAT5B (ENSCLAG00000013346) #20	MFSD11 (ENSCLAG00000007261) #21	ENSCLAG00000012450 #22	JMJD6 (ENSCLAG00000010162) #24	ENSCLAG00000008140 #25	ST6GALNAC1 (ENSCLAG00000007640) #26	ST6GALNAC2 (ENSCLAG00000010327) #27	PRCD (ENSCLAG00000009358)	CYGB (ENSCLAG00000010138) #30	RHBDF2 (ENSCLAG00000010237) #31	AANAT (ENSCLAG00000015545) #32	UBE2O (ENSCLAG00000011856) #33	SPHK1 (ENSCLAG00000013229) #34	PRPSAP1 (ENSCLAG00000007525) #35	ENSCLAG00000008887	ENSCLAG00000013789 #36	UBALD2 (ENSCLAG00000007176) #37	RNF157 (ENSCLAG00000007864)
Degu	MODERN SPECIES	74				SOCS3 (ENSODEG00000019991)	ENSODEG00000011695 #7	TK1 (ENSODEG00000011369) #11	SYNGR2 (ENSODEG00000013460) #12	ENSODEG00000011422 #15	TNRC6C (ENSODEG00000012499) #16	ENSODEG00000019785	SEPTIN9 (ENSODEG00000012340) #18	ENSODEG00000019912	SEC14L1 (ENSODEG00000012264) #19	MGAT5B (ENSODEG00000010875) #20	MFSD11 (ENSODEG00000011918) #21	ENSODEG00000014748 #22	METTL23 (ENSODEG00000011047)	JMJD6 (ENSODEG00000011632) #24	ENSODEG00000010744	CYGB (ENSODEG00000011488) #30	RHBDF2 (ENSODEG00000010976) #31	Aanat (ENSODEG00000010785) #32	UBE2O (ENSODEG00000010303) #33	PRPSAP1 (ENSODEG00000010893) #35	UBALD2 (ENSODEG00000010660) #37	ENSODEG00000011892	RNF157 (ENSODEG00000010225)	FOXJ1 (ENSODEG00000013249)	ENSODEG00000010943	GALR2 (ENSODEG00000010552)	ENSODEG00000011522
Naked mole-rat female	MODERN SPECIES	12	BIRC5 (ENSHGLG00000010313) #9	AFMID (ENSHGLG00000008814) #10	ENSHGLG00000042507	TK1 (ENSHGLG00000008362) #11	SYNGR2 (ENSHGLG00000008306) #12	C17orf99 (ENSHGLG00000009374) #13	TMC8 (ENSHGLG00000008951) #14	TMC6 (ENSHGLG00000006996) #15	TNRC6C (ENSHGLG00000004809) #16	ENSHGLG00000045488	SEPTIN9 (ENSHGLG00000034038) #18	SEC14L1 (ENSHGLG00000017293) #19	ENSHGLG00000040836	MGAT5B (ENSHGLG00000017285) #20	MFSD11 (ENSHGLG00000017219) #21	ENSHGLG00000017262 #22	METTL23 (ENSHGLG00000034053)	JMJD6 (ENSHGLG00000013611) #24	ENSHGLG00000012861	ENSHGLG00000040777	ST6GALNAC1 (ENSHGLG00000016533) #26	ENSHGLG00000021096	ST6GALNAC2 (ENSHGLG00000016472) #27	ENSHGLG00000041504	PRCD (ENSHGLG00000043747)	Cygb (ENSHGLG00000032440) #30	RHBDF2 (ENSHGLG00000007384) #31	AANAT (ENSHGLG00000006672) #32	UBE2O (ENSHGLG00000006311) #33	ENSHGLG00000048367 #34	ENSHGLG00000005280 #35
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00390000002373	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930.d #26	ENSGT00860000135966	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Eurasian red squirrel	MODERN SPECIES	12	DNAH17 (ENSSVLG00005019564)	PGS1 (ENSSVLG00005020209)	SOCS3 (ENSSVLG00005020270)	ENSSVLG00005020294 #7	BIRC5 (ENSSVLG00005020489) #9	AFMID (ENSSVLG00005020546) #10	TK1 (ENSSVLG00005020609) #11	SYNGR2 (ENSSVLG00005020697) #12	TMC8 (ENSSVLG00005020762) #14	TMC6 (ENSSVLG00005020990) #15	TNRC6C (ENSSVLG00005021351) #16	SEPTIN9 (ENSSVLG00005021788) #18	SEC14L1 (ENSSVLG00005021864) #19	MGAT5B (ENSSVLG00005021925) #20	MFSD11 (ENSSVLG00005022242) #21	ENSSVLG00005022400 #22	METTL23 (ENSSVLG00005022436)	JMJD6 (ENSSVLG00005022517) #24	ENSSVLG00005022580	ST6GALNAC1 (ENSSVLG00005022612) #26	ST6GALNAC2 (ENSSVLG00005022754) #27	PRCD (ENSSVLG00005022841)	CYGB (ENSSVLG00005022857) #30	RHBDF2 (ENSSVLG00005022898) #31	AANAT (ENSSVLG00005022922) #32	ENSSVLG00005022947	UBE2O (ENSSVLG00005022995) #33	SPHK1 (ENSSVLG00005023035) #34	PRPSAP1 (ENSSVLG00005023130) #35	QRICH2 (ENSSVLG00005023200) #36	ENSSVLG00005023381 #37
Marmotini	ANCESTRAL SPECIES	36	ENSGT00390000002373	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930.d #26	ENSGT00860000135966	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	3	OVCH2 (ENSMMMG00000015931)	ENSMMMG00000015960	ENSMMMG00000015963	ENSMMMG00000015971	ENSMMMG00000015977	ENSMMMG00000015986	ENSMMMG00000015993	ENSMMMG00000015997	ENSMMMG00000016007	ENSMMMG00000016012	ENSMMMG00000016015	ENSMMMG00000016027	ENSMMMG00000016030	ENSMMMG00000016033	ENSMMMG00000016041	ENSMMMG00000016046 #22	ENSMMMG00000016052	ENSMMMG00000016056	NLRP10 (ENSMMMG00000016058)	EIF3F (ENSMMMG00000016096)	TUB (ENSMMMG00000016165)	RIC3 (ENSMMMG00000016178)	LMO1 (ENSMMMG00000016189)	ENSMMMG00000016236	TRIM66 (ENSMMMG00000016240)	RPL27A (ENSMMMG00000016275)	DENND2B (ENSMMMG00000016290)	AKIP1 (ENSMMMG00000016433)	C11orf16 (ENSMMMG00000016439)	ASCL3 (ENSMMMG00000016451)	ENSMMMG00000016455
Alpin marmot	MODERN SPECIES	21	ENSMMMG00000008731	ENSMMMG00000008747	MAGEB10 (ENSMMMG00000008757)	IL1RAPL1 (ENSMMMG00000008816)	MAGEB2 (ENSMMMG00000008852)	ENSMMMG00000008898	ENSMMMG00000008902	TASL (ENSMMMG00000008909)	ENSMMMG00000008926	TAB3 (ENSMMMG00000009282)	ENSMMMG00000009314	ENSMMMG00000009321	DMD (ENSMMMG00000009471)	ENSMMMG00000009599	ENSMMMG00000009661	ENSMMMG00000009675 #22	ENSMMMG00000009690	ENSMMMG00000009711	ENSMMMG00000009784	ENSMMMG00000009849	PRRG1 (ENSMMMG00000009880)	ENSMMMG00000009939	ENSMMMG00000009942	XK (ENSMMMG00000009986)	ENSMMMG00000009990	ENSMMMG00000010001	DYNLT3 (ENSMMMG00000010004)	ENSMMMG00000010049	SYTL5 (ENSMMMG00000010054)	SRPX (ENSMMMG00000010108)	ENSMMMG00000010133
Marmotini_b	ANCESTRAL SPECIES	20	ENSGT00390000002373	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386.f #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930.d #26	ENSGT00860000135966	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Squirrel	MODERN SPECIES	194	PGS1 (ENSSTOG00000010898)	SOCS3 (ENSSTOG00000010896)	ENSSTOG00000022292 #7	TMEM235 (ENSSTOG00000023248) #8	BIRC5 (ENSSTOG00000020326) #9	AFMID (ENSSTOG00000016387) #10	TK1 (ENSSTOG00000023812) #11	SYNGR2 (ENSSTOG00000006834) #12	TMC8 (ENSSTOG00000028601) #14	TMC6 (ENSSTOG00000026885) #15	TNRC6C (ENSSTOG00000009101) #16	ENSSTOG00000027666 #18	SEC14L1 (ENSSTOG00000014530) #19	MGAT5B (ENSSTOG00000022165) #20	MFSD11 (ENSSTOG00000001451) #21	ENSSTOG00000025265 #22	METTL23 (ENSSTOG00000001447)	JMJD6 (ENSSTOG00000001443) #24	ST6GALNAC1 (ENSSTOG00000027866) #26	ENSSTOG00000031427	ST6GALNAC2 (ENSSTOG00000020786) #27	PRCD (ENSSTOG00000030365)	CYGB (ENSSTOG00000006499) #30	RHBDF2 (ENSSTOG00000013560) #31	AANAT (ENSSTOG00000013555) #32	UBE2O (ENSSTOG00000028690) #33	SPHK1 (ENSSTOG00000021818) #34	PRPSAP1 (ENSSTOG00000024445) #35	ENSSTOG00000020503 #36	UBALD2 (ENSSTOG00000010745) #37	RNF157 (ENSSTOG00000010734)
Arctic ground squirrel	DUPLICATION
Arctic ground squirrel	MODERN SPECIES	308												SEPTIN9 (ENSUPAG00010001045) #18	SEC14L1 (ENSUPAG00010000981) #19	MGAT5B (ENSUPAG00010000929) #20	MFSD11 (ENSUPAG00010000899) #21	ENSUPAG00010000884 #22	METTL23 (ENSUPAG00010000882)	JMJD6 (ENSUPAG00010000850) #24	ENSUPAG00010000805 #25	ST6GALNAC1 (ENSUPAG00010000792) #26	ST6GALNAC2 (ENSUPAG00010000773) #27	PRCD (ENSUPAG00010000735)	CYGB (ENSUPAG00010000715) #30	RHBDF2 (ENSUPAG00010000687) #31	AANAT (ENSUPAG00010000680) #32	UBE2O (ENSUPAG00010000644) #33	SPHK1 (ENSUPAG00010000611) #34	PRPSAP1 (ENSUPAG00010000598) #35	ENSUPAG00010000581 #36	UBALD2 (ENSUPAG00010000572) #37	RNF157 (ENSUPAG00010000471)
Arctic ground squirrel	MODERN SPECIES	558															ENSUPAG00010010077	ENSUPAG00010010068 #22	ENSUPAG00010010058	TMEM47 (ENSUPAG00010010050)	ENSUPAG00010010045
Primates	ANCESTRAL SPECIES	19	ENSGT01090000260076.b.b	ENSGT00940000164194	ENSGT00940000155485	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a	ENSGT00940000159499	ENSGT00940000165498	ENSGT00940000154342.C	ENSGT00530000063484.b.b	ENSGT00940000162825	ENSGT00940000159699	ENSGT00940000163254	ENSGT00940000163202	ENSGT00940000158538	ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000160244	ENSGT00940000155009.k.b	ENSGT00390000015623	ENSGT00940000162492	ENSGT00940000155009.k.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000153096.b.c.a.a.b
Strepsirrhini	ANCESTRAL SPECIES	23	ENSGT00390000013549.a.b.b	ENSGT01030000234646.B.a.b	ENSGT00940000156040	ENSGT00550000074891	ENSGT00940000160633	ENSGT00940000163449	ENSGT00940000159951	ENSGT01090000260076.b.b	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.l	ENSGT00940000159499	ENSGT00940000158538	ENSGT00940000165498	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000160244	ENSGT00940000155009.k.b	ENSGT00390000015623	ENSGT00940000155009.l	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000153096.b.c.a.a.b	ENSGT00940000156153
Bushbaby	MODERN SPECIES	187	ENSOGAG00000016952	TAB3 (ENSOGAG00000008205)	ENSOGAG00000027570	ENSOGAG00000028500	ENSOGAG00000033418	ENSOGAG00000026278	ENSOGAG00000032165	ENSOGAG00000031127	DMD (ENSOGAG00000011412)	ENSOGAG00000007799	ENSOGAG00000026817	ENSOGAG00000033951	ENSOGAG00000027750	ENSOGAG00000028204	ENSOGAG00000014885	ENSOGAG00000031672 #22	ENSOGAG00000013404	ENSOGAG00000024657	ENSOGAG00000007664	ENSOGAG00000025367	TMEM47 (ENSOGAG00000034589)	ENSOGAG00000000777	ENSOGAG00000024815	ENSOGAG00000031362	ENSOGAG00000024364	ENSOGAG00000034268	ENSOGAG00000029642	ENSOGAG00000027810	ENSOGAG00000025392	ENSOGAG00000025292	ENSOGAG00000007432
Lemuriformes	ANCESTRAL SPECIES	48	ENSGT00940000159116	ENSGT00550000074801.g.b	ENSGT00940000158684	ENSGT01030000234646.B.a.b	ENSGT00940000156040	ENSGT00550000074891	ENSGT00940000160633	ENSGT00940000163449	ENSGT01090000260076.b.b	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.l	ENSGT00940000159499	ENSGT00940000165498	ENSGT00940000154342.C	ENSGT00940000154883.h #22
Lemuriformes_a	ANCESTRAL SPECIES	240								ENSGT00940000155485	ENSGT00940000164194	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.l	ENSGT00940000159499	ENSGT00940000165498	ENSGT00940000154342.C	ENSGT00940000154883.h #22
Greater bamboo lemur	MODERN SPECIES	790					ENSPSMG00000008228	MAGEB3 (ENSPSMG00000008215)	ENSPSMG00000008205	ENSPSMG00000008198	NR0B1 (ENSPSMG00000008185)	TASL (ENSPSMG00000008175)	ENSPSMG00000007863	ENSPSMG00000007317	TAB3 (ENSPSMG00000007291)	FTHL17 (ENSPSMG00000007261)	DMD (ENSPSMG00000005175)	ENSPSMG00000003785 #22
Laurasiatheria	ANCESTRAL SPECIES	16	ENSGT00940000163033.a.a	ENSGT00390000018199.b.b.b	ENSGT00950000182900.D.d.b	ENSGT00940000163797.a.b	ENSGT00940000167876	ENSGT01090000260076.b.b	ENSGT00940000155485.a.a	ENSGT00940000164194	ENSGT00940000155485.a.b	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a	ENSGT00940000159499	ENSGT00940000165498	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00530000063484.b.b	ENSGT00940000158538	ENSGT00950000182841.b.a.a.b.a.a.a.b	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000160244	ENSGT00940000155009	ENSGT00390000015623	ENSGT00950000183442	ENSGT00940000162825	ENSGT00940000159699	ENSGT00940000163254
Laurasiatheria_a	ANCESTRAL SPECIES	10	ENSGT00390000018199.b.b.b	ENSGT00950000182900.D.d.b	ENSGT00940000163797.a.b	ENSGT00940000163797.a.a	ENSGT00940000165324	ENSGT01090000260076.b.b	ENSGT00940000155485.a.a	ENSGT00940000164194	ENSGT00940000155485.a.b	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a	ENSGT00940000159499	ENSGT00940000165498	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00530000063484.b.b	ENSGT00950000183442	ENSGT00940000158538	ENSGT00950000182841.b.a.a.b.a.a.a.b	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a.d	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000160244	ENSGT00940000155009	ENSGT00390000015623	ENSGT00940000165165	ENSGT00940000162825	ENSGT00940000159699
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT00940000175759	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT01050000246282	ENSGT00940000155386 #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00860000135966	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Laurasiatheria_c	ANCESTRAL SPECIES																	ENSGT00940000154883.h #22
Chiroptera	ANCESTRAL SPECIES																	ENSGT00940000154883.h #22
Microchiroptera	ANCESTRAL SPECIES																	ENSGT00940000154883.h #22
Microbat	MODERN SPECIES	957	TASL (ENSMLUG00000003780)	ENSMLUG00000001046	TAB3 (ENSMLUG00000000437)	ENSMLUG00000011420	ENSMLUG00000026058	ENSMLUG00000028091	ENSMLUG00000027521	ENSMLUG00000024582	ENSMLUG00000025720	ENSMLUG00000027084	ENSMLUG00000006561	ENSMLUG00000026281	ENSMLUG00000017173	ENSMLUG00000024156	ENSMLUG00000029825	ENSMLUG00000026613 #22	ENSMLUG00000012521
Carnivora	ANCESTRAL SPECIES	9	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00950000183754	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT00940000175759	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT01050000246282	ENSGT00940000155386 #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37	ENSGT00390000009925.b
Felidae	ANCESTRAL SPECIES	8	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00950000183754	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244894.a.a.a.b #14	ENSGT00940000175759	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT01050000247447	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Cat	MODERN SPECIES	245	PGS1 (ENSFCAG00000002345)	SOCS3 (ENSFCAG00000027677)	THA1 (ENSFCAG00000024226) #7	BIRC5 (ENSFCAG00000039377) #9	AFMID (ENSFCAG00000030555) #10	TK1 (ENSFCAG00000013007) #11	SYNGR2 (ENSFCAG00000031160) #12	TMC8 (ENSFCAG00000015124) #14	ENSFCAG00000050973	ENSFCAG00000028352 #15	TNRC6C (ENSFCAG00000028358) #16	SEPTIN9 (ENSFCAG00000009399) #18	SEC14L1 (ENSFCAG00000031926) #19	MGAT5B (ENSFCAG00000004239) #20	MFSD11 (ENSFCAG00000004238) #21	ENSFCAG00000043466 #22	METTL23 (ENSFCAG00000004237)	JMJD6 (ENSFCAG00000036909) #24	ST6GALNAC1 (ENSFCAG00000004234) #26	ST6GALNAC2 (ENSFCAG00000012068) #27	PRCD (ENSFCAG00000046670)	CYGB (ENSFCAG00000005460) #30	RHBDF2 (ENSFCAG00000005459) #31	AANAT (ENSFCAG00000005458) #32	UBE2O (ENSFCAG00000005457)	SPHK1 (ENSFCAG00000005455) #34	PRPSAP1 (ENSFCAG00000022663) #35	ENSFCAG00000051452	QRICH2 (ENSFCAG00000040285) #36	UBALD2 (ENSFCAG00000042280) #37	RNF157 (ENSFCAG00000005773)
Panthera	ANCESTRAL SPECIES	22	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00950000183754	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT01050000247447	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Panthera_a	ANCESTRAL SPECIES	25	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00950000183754	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT01050000247447	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
lion	MODERN SPECIES	14	DNAH17 (ENSPLOG00000005623)	PGS1 (ENSPLOG00000005964)	SOCS3 (ENSPLOG00000005993)	ENSPLOG00000006022 #7	BIRC5 (ENSPLOG00000006125) #9	AFMID (ENSPLOG00000006240) #10	TK1 (ENSPLOG00000006331) #11	SYNGR2 (ENSPLOG00000006379) #12	TMC8 (ENSPLOG00000006426) #14	TMC6 (ENSPLOG00000006469) #15	TNRC6C (ENSPLOG00000006508) #16	SEPTIN9 (ENSPLOG00000006644) #18	SEC14L1 (ENSPLOG00000006825) #19	MGAT5B (ENSPLOG00000006996) #20	MFSD11 (ENSPLOG00000007117) #21	ENSPLOG00000007231 #22	ENSPLOG00000007250	JMJD6 (ENSPLOG00000007293) #24	ENSPLOG00000007343 #25	ST6GALNAC1 (ENSPLOG00000007369) #26	ST6GALNAC2 (ENSPLOG00000007452) #27	PRCD (ENSPLOG00000007497)	CYGB (ENSPLOG00000007522) #30	RHBDF2 (ENSPLOG00000007676) #31	AANAT (ENSPLOG00000007751) #32	UBE2O (ENSPLOG00000007774) #33	SPHK1 (ENSPLOG00000007873) #34	PRPSAP1 (ENSPLOG00000007938) #35	QRICH2 (ENSPLOG00000008014) #36	ENSPLOG00000008180	ENSPLOG00000008204 #37
Caniformia	ANCESTRAL SPECIES	6	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00950000183754	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT01050000246282	ENSGT00940000155386 #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00950000185129	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Canidae	ANCESTRAL SPECIES	28	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00950000185129	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37	ENSGT00390000009925.b
Canis_lupus	ANCESTRAL SPECIES	34	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00950000185129	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37	ENSGT00390000009925.b
Dog	MODERN SPECIES	37	PGS1 (ENSCAFG00845014578)	SOCS3 (ENSCAFG00845014621)	THA1 (ENSCAFG00845014635) #7	TMEM235 (ENSCAFG00845014659) #8	BIRC5 (ENSCAFG00845014719) #10	TK1 (ENSCAFG00845014848) #11	SYNGR2 (ENSCAFG00845014880) #12	C17orf99 (ENSCAFG00845014912) #13	TMC8 (ENSCAFG00845014942) #14	TMC6 (ENSCAFG00845015089) #15	TNRC6C (ENSCAFG00845015344) #16	SEPTIN9 (ENSCAFG00845015543) #18	SEC14L1 (ENSCAFG00845015759) #19	MGAT5B (ENSCAFG00845015937) #20	MFSD11 (ENSCAFG00845016337) #21	ENSCAFG00845016418 #22	METTL23 (ENSCAFG00845016485)	JMJD6 (ENSCAFG00845016622) #24	ENSCAFG00845016694	ST6GALNAC1 (ENSCAFG00845016785) #26	ST6GALNAC2 (ENSCAFG00845016971) #27	PRCD (ENSCAFG00845017103)	CYGB (ENSCAFG00845017204) #30	RHBDF2 (ENSCAFG00845017297) #31	AANAT (ENSCAFG00845017611) #32	UBE2O (ENSCAFG00845017744)	SPHK1 (ENSCAFG00845018270) #34	PRPSAP1 (ENSCAFG00845018380) #35	ENSCAFG00845018478 #36	ENSCAFG00845018617	UBALD2 (ENSCAFG00845018647) #37
Dingo	MODERN SPECIES	68	PGS1 (ENSCAFG00020006979)	SOCS3 (ENSCAFG00020006975)	ENSCAFG00020006972 #7	TMEM235 (ENSCAFG00020006970) #8	BIRC5 (ENSCAFG00020006968) #9	AFMID (ENSCAFG00020006935) #10	TK1 (ENSCAFG00020006905) #11	SYNGR2 (ENSCAFG00020006897) #12	TMC8 (ENSCAFG00020006887) #14	TMC6 (ENSCAFG00020006872) #15	TNRC6C (ENSCAFG00020006661) #16	SEPTIN9 (ENSCAFG00020006642) #18	SEC14L1 (ENSCAFG00020006343) #19	MGAT5B (ENSCAFG00020006283) #20	MFSD11 (ENSCAFG00020006274) #21	ENSCAFG00020006267 #22	ENSCAFG00020006262	JMJD6 (ENSCAFG00020006250) #24	ST6GALNAC1 (ENSCAFG00020006223) #26	ST6GALNAC2 (ENSCAFG00020006213) #27	PRCD (ENSCAFG00020006203)	CYGB (ENSCAFG00020006201) #30	RHBDF2 (ENSCAFG00020006167) #31	AANAT (ENSCAFG00020006142) #32	UBE2O (ENSCAFG00020006063) #33	SPHK1 (ENSCAFG00020006049) #34	PRPSAP1 (ENSCAFG00020006042) #35	ENSCAFG00020006036	ENSCAFG00020006033 #36	ENSCAFG00020006028 #36	UBALD2 (ENSCAFG00020006020) #37
Caniformia_b	ANCESTRAL SPECIES	20	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00950000183754	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT01050000246282	ENSGT00940000155386 #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00950000185129	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Ursidae	ANCESTRAL SPECIES	19	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00950000183754	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT01050000246282	ENSGT00940000155386 #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00950000185129	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37
Ursus	ANCESTRAL SPECIES	2	ENSGT00390000014681 #7	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00950000183754	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT01050000246282	ENSGT00940000155386 #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00950000185129	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37	ENSGT00390000009925.b
American black bear	MODERN SPECIES	294														MGAT5B (ENSUAMG00000013408) #20	MFSD11 (ENSUAMG00000013405) #21	ENSUAMG00000013403 #22	METTL23 (ENSUAMG00000013402)	JMJD6 (ENSUAMG00000013398) #24	ST6GALNAC1 (ENSUAMG00000013389) #26	ST6GALNAC2 (ENSUAMG00000013385) #27	CYGB (ENSUAMG00000013381) #30
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	564																ENSAMEG00000027086 #22
Giant Panda	MODERN SPECIES	1472																ENSAMEG00000024590 #22
Giant Panda	MODERN SPECIES	4	SOCS3 (ENSAMEG00000019175)	ENSAMEG00000013872 #7	TMEM235 (ENSAMEG00000013870) #8	BIRC5 (ENSAMEG00000013864) #9	AFMID (ENSAMEG00000013854) #10	TK1 (ENSAMEG00000013839) #11	SYNGR2 (ENSAMEG00000013831) #12	C17orf99 (ENSAMEG00000013830) #13	TMC8 (ENSAMEG00000013800) #14	TMC6 (ENSAMEG00000013773) #15	TNRC6C (ENSAMEG00000013756) #16	SEPTIN9 (ENSAMEG00000013722) #18	SEC14L1 (ENSAMEG00000013683) #19	MGAT5B (ENSAMEG00000013660) #20	MFSD11 (ENSAMEG00000013630) #21	ENSAMEG00000013624 #22	ENSAMEG00000027394	JMJD6 (ENSAMEG00000013599) #24	ENSAMEG00000026363	ST6GALNAC1 (ENSAMEG00000010401) #26	ENSAMEG00000026660	ST6GALNAC2 (ENSAMEG00000010379) #27	PRCD (ENSAMEG00000029007)	CYGB (ENSAMEG00000010367) #30	RHBDF2 (ENSAMEG00000010328) #31	AANAT (ENSAMEG00000029227) #32	UBE2O (ENSAMEG00000010307) #33	SPHK1 (ENSAMEG00000010292) #34	PRPSAP1 (ENSAMEG00000010268) #35	ENSAMEG00000030737	QRICH2 (ENSAMEG00000025384) #36
Mustelinae	ANCESTRAL SPECIES	1	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00390000011615.A #8	ENSGT00510000047537 #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867 #24	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000008825.b.b #37	ENSGT00390000009925.b	ENSGT00940000156895
Ferret	MODERN SPECIES	186	SYNGR2 (ENSMPUG00000013312) #12	C17orf99 (ENSMPUG00000013324) #13	TMC8 (ENSMPUG00000013330) #14	ENSMPUG00000019915	TMC6 (ENSMPUG00000013339) #15	TNRC6C (ENSMPUG00000013348) #16	ENSMPUG00000013357	ENSMPUG00000013359	ENSMPUG00000013366	ENSMPUG00000013369	SEPTIN9 (ENSMPUG00000013372) #18	ENSMPUG00000013380	SEC14L1 (ENSMPUG00000013385) #19	MGAT5B (ENSMPUG00000013394) #20	MFSD11 (ENSMPUG00000013399) #21	ENSMPUG00000013408 #22	METTL23 (ENSMPUG00000013421)	JMJD6 (ENSMPUG00000013425) #24	ST6GALNAC1 (ENSMPUG00000013427) #26	ST6GALNAC2 (ENSMPUG00000013433) #27	CYGB (ENSMPUG00000013471) #30	RHBDF2 (ENSMPUG00000013473) #31	AANAT (ENSMPUG00000013484) #32	UBE2O (ENSMPUG00000013490) #33	SPHK1 (ENSMPUG00000013498) #34	PRPSAP1 (ENSMPUG00000013500) #35	ENSMPUG00000013505 #36	ENSMPUG00000013507 #36	RNF157 (ENSMPUG00000013512)	FOXJ1 (ENSMPUG00000013521)	EXOC7 (ENSMPUG00000013525)
American mink	MODERN SPECIES	27	ENSNVIG00000013890 #7	TMEM235 (ENSNVIG00000013876) #8	BIRC5 (ENSNVIG00000013860) #9	ENSNVIG00000013845	ENSNVIG00000013839 #11	SYNGR2 (ENSNVIG00000013828) #12	ENSNVIG00000013823 #13	TMC8 (ENSNVIG00000013797) #14	ENSNVIG00000013760 #15	TNRC6C (ENSNVIG00000013618) #16	SEPTIN9 (ENSNVIG00000013569) #18	SEC14L1 (ENSNVIG00000013472) #19	ENSNVIG00000013464	MGAT5B (ENSNVIG00000013257) #20	MFS11 (ENSNVIG00000013122) #21	ENSNVIG00000013109 #22	METTL23 (ENSNVIG00000013092)	JMJD6 (ENSNVIG00000013060) #24	ENSNVIG00000013049	ST6GALNAC1 (ENSNVIG00000013010) #26	ST6GALNAC2 (ENSNVIG00000012979) #27	PRCD (ENSNVIG00000012941)	CYGB (ENSNVIG00000012915) #30	RHBDF2 (ENSNVIG00000012733) #31	AANAT (ENSNVIG00000012715) #32	UBE2O (ENSNVIG00000012693) #33	SPHK1 (ENSNVIG00000012665) #34	PRPSAP1 (ENSNVIG00000012655) #35	ENSNVIG00000012649	QRICH2 (ENSNVIG00000012581) #36	UBALD2 (ENSNVIG00000012570) #37
Artiodactyla	ANCESTRAL SPECIES	9	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.i.b	ENSGT00940000159499	ENSGT00530000063484.b.b	ENSGT00950000183442	ENSGT00940000165165	ENSGT00940000162825	ENSGT00940000159699	ENSGT00940000163254	ENSGT00940000163202	ENSGT00940000158538	ENSGT00950000182841.b.a.a.a.d.a.b	ENSGT00950000182841.b.a.a.a.d.a.a	ENSGT00940000165498	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a.d.b	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000160244	ENSGT00940000155009	ENSGT00940000162492	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417.j	ENSGT00940000153096.b.c.a.a.b	ENSGT00940000156153	ENSGT00500000044890.a.a
Suina	ANCESTRAL SPECIES	41	ENSGT00940000163033.a.b	ENSGT00940000163033.a.a	ENSGT00390000018199.b.b.b	ENSGT00950000182900.D.d.b	ENSGT00940000163797.a.b	ENSGT00940000163797.a.a	ENSGT00940000165324	ENSGT00390000013549.a.b.b.p	ENSGT01090000260076.b.b	ENSGT00940000164194	ENSGT00940000155485.a.b	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.i.b	ENSGT00940000159499	ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00530000063484.b.b	ENSGT00950000183442	ENSGT00940000165165	ENSGT00940000162825.j	ENSGT00940000162825.i.a.a	ENSGT00940000159699	ENSGT00940000163254
Pig	MODERN SPECIES	300	NR0B1 (ENSSSCG00000012199)	ENSSSCG00000062345	ENSSSCG00000012200	TASL (ENSSSCG00000012201)	ENSSSCG00000012202	TAB3 (ENSSSCG00000012203)	ENSSSCG00000057437	ENSSSCG00000057239	FTHL17 (ENSSSCG00000051839)	DMD (ENSSSCG00000028148)	ENSSSCG00000048743	ENSSSCG00000043411	ENSSSCG00000060661	ENSSSCG00000052612	ENSSSCG00000043660	ENSSSCG00000012212 #22	ENSSSCG00000012213	ENSSSCG00000049970	TMEM47 (ENSSSCG00000024132)	ENSSSCG00000048741	ENSSSCG00000043661	ENSSSCG00000012218	ENSSSCG00000037401	ENSSSCG00000057625	ENSSSCG00000034690	ENSSSCG00000012219	ENSSSCG00000030800	ENSSSCG00000052786	ENSSSCG00000063555	ENSSSCG00000055323	ENSSSCG00000058315
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT01030000234646.B.a.b	ENSGT00940000156040	ENSGT00550000074891	ENSGT00940000160633	ENSGT00390000013549.a.b.b.o.b	ENSGT01090000260076.b.b	ENSGT00940000155485.a.a	ENSGT00940000164194	ENSGT00940000155485.a.b	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.i.b	ENSGT00940000159499	ENSGT00940000165498	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00950000182841.b.a.a.a.d.a.a	ENSGT00530000063484.b.b	ENSGT00950000183442	ENSGT00940000165165	ENSGT00940000162825	ENSGT00940000159699	ENSGT00940000163254	ENSGT00940000163202	ENSGT00940000158538	ENSGT00950000182841.b.a.a.a.d.a.b	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a.d.b	ENSGT00530000063186.a	ENSGT00390000003231.b
Artiodactyla_b	ANCESTRAL SPECIES	24	ENSGT00390000013549.a.b.b.o.a	ENSGT01030000234646.B.a.b	ENSGT00940000156040	ENSGT00550000074891	ENSGT00940000160633	ENSGT00390000013549.a.b.b.o.b	ENSGT01090000260076.b.b	ENSGT00940000155485.a.a	ENSGT00940000164194	ENSGT00940000155485.a.b	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.i.b	ENSGT00940000159499	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00950000182841.b.a.a.a.d.a.a	ENSGT00530000063484.b.b	ENSGT00950000183442	ENSGT00940000165165	ENSGT00940000162825	ENSGT00940000159699	ENSGT00940000163254	ENSGT00940000158538	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a.d.b	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000160244	ENSGT00940000155009
Cetacea	ANCESTRAL SPECIES																	ENSGT00940000154883.h #22
Odontoceti	ANCESTRAL SPECIES																	ENSGT00940000154883.h #22
Sperm whale	MODERN SPECIES	10	GALNT1 (ENSPCTG00005006130)	C18orf21 (ENSPCTG00005006174)	RPRD1A (ENSPCTG00005006209)	SLC39A6 (ENSPCTG00005006250)	ELP2 (ENSPCTG00005006318)	MOCOS (ENSPCTG00005006528)	FHOD3 (ENSPCTG00005006676)	TPGS2 (ENSPCTG00005006766)	KIAA1328 (ENSPCTG00005006884)	CELF4 (ENSPCTG00005007148)	ENSPCTG00005007437	PIK3C3 (ENSPCTG00005007499)	ENSPCTG00005007674	ENSPCTG00005007696	SYT4 (ENSPCTG00005007715)	ENSPCTG00005007743 #22	ENSPCTG00005007758	SETBP1 (ENSPCTG00005007777)	SLC14A2 (ENSPCTG00005007803)	SLC14A1 (ENSPCTG00005007875)	SIGLEC15 (ENSPCTG00005008000)	EPG5 (ENSPCTG00005008044)	PSTPIP2 (ENSPCTG00005008088)	ATP5F1A (ENSPCTG00005008127)	HAUS1 (ENSPCTG00005008172)	C19H18orf25 (ENSPCTG00005008306)	RNF165 (ENSPCTG00005008364)	ENSPCTG00005008447	ST8SIA5 (ENSPCTG00005008579)	ENSPCTG00005008636	PIAS2 (ENSPCTG00005008808)
Pecora	ANCESTRAL SPECIES	34	ENSGT01030000234646.B.a.b	ENSGT00940000156040	ENSGT00550000074891	ENSGT00940000160633	ENSGT00390000013549.a.b.b.o.b	ENSGT01090000260076.b.b	ENSGT00940000155485.a.a.a.b	ENSGT00940000164194	ENSGT00940000155485.a.b.e	ENSGT00940000155485.a.b.f	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.i.b	ENSGT00940000159499	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00950000182841.b.a.a.a.d.b.b	ENSGT00530000063484.b.b	ENSGT00950000183442	ENSGT00940000162825.p.a	ENSGT00940000162825.p.b	ENSGT00940000159699	ENSGT00940000163254	ENSGT00940000165165	ENSGT00950000182841.b.a.a.a.d.b.a.a.a	ENSGT00940000158538	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a.d.b.a.b	ENSGT00530000063186.a	ENSGT00390000003231.b
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	1323	IL1RAPL1 (ENSCHYG00000018100)	ENSCHYG00000018076	ENSCHYG00000017970	ENSCHYG00000017951	ENSCHYG00000017897	ENSCHYG00000017868	ENSCHYG00000017854	ENSCHYG00000017837	NR0B1 (ENSCHYG00000017774)	TASL (ENSCHYG00000017678)	ENSCHYG00000017279	TAB3 (ENSCHYG00000017183)	ENSCHYG00000017141	DMD (ENSCHYG00000025075)	ENSCHYG00000024891	ENSCHYG00000024884 #22	ENSCHYG00000024874	ENSCHYG00000024865	ENSCHYG00000024844	ENSCHYG00000024831	ENSCHYG00000024803	ENSCHYG00000024784	ENSCHYG00000024760	ENSCHYG00000024561	ENSCHYG00000024537	ENSCHYG00000024517	ENSCHYG00000024508	ENSCHYG00000024484	PRRG1 (ENSCHYG00000024453)	ENSCHYG00000024437	ENSCHYG00000024427
Yarkand deer	MODERN SPECIES	101																ENSCHYG00000012195 #22
Percora_a	ANCESTRAL SPECIES	22	ENSGT00950000182900.D.d.b	ENSGT00940000163797.a.b	ENSGT00940000163797.a.a	ENSGT00940000165324	ENSGT01090000260076.b.b	ENSGT00390000013549.a.b.b.o.b	ENSGT00940000155485.a.a.a.b	ENSGT00940000164194	ENSGT00940000155485.a.b.e	ENSGT00940000155485.a.b.f	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.i.b	ENSGT00940000159499	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000164247.e	ENSGT00940000164247.f	ENSGT00950000182841.b.a.a.a.d.b.b	ENSGT00530000063484.b.b	ENSGT00950000183442	ENSGT00940000162825.p.a	ENSGT00940000162825.p.b	ENSGT00940000159699	ENSGT00940000163254	ENSGT00940000165165	ENSGT00950000182841.b.a.a.a.d.b.a.a.a	ENSGT00940000158538	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a.d.b.a.b	ENSGT00530000063186.a
Siberian musk deer	MODERN SPECIES	76															ENSMMSG00000014267	ENSMMSG00000014252 #22	ENSMMSG00000014230	ENSMMSG00000014212	ENSMMSG00000014198	TMEM47 (ENSMMSG00000012828)	ENSMMSG00000012803	ENSMMSG00000012777	ENSMMSG00000012763	CFAP47 (ENSMMSG00000012416)	ENSMMSG00000012332	ENSMMSG00000012308
Bovidae	ANCESTRAL SPECIES	23	ENSGT00940000163797.a.a	ENSGT00940000165324	ENSGT01090000260076.b.b	ENSGT00390000013549.a.b.b.o.b	ENSGT00940000155485.a.a.a.b	ENSGT00940000164194	ENSGT00940000155485.a.b.e	ENSGT01090000260200	ENSGT00940000155485.a.a.b	ENSGT00940000155485.a.b.f	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.i.b	ENSGT00940000159499	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000164247.e	ENSGT00940000164247.f	ENSGT00530000063484.b.b	ENSGT00950000183442	ENSGT00940000162825.p.a	ENSGT00940000162825.p.b	ENSGT00940000159699	ENSGT00940000163254	ENSGT00940000165165	ENSGT00950000182841.b.a.a.a.d.b.a.a.a.b	ENSGT00940000158538	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a.d.b.a.b	ENSGT00530000063186.a	ENSGT00390000003231.b
Caprinae	ANCESTRAL SPECIES	57						ENSGT01090000260076.b.b	ENSGT00390000013549.a.b.b.o.b	ENSGT00940000155485.a.a.a.b.f	ENSGT00940000153169.A.b.b.a.a.a.b.l	ENSGT00940000166106	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.i.b	ENSGT00940000159499	ENSGT00940000154342.C.vb	ENSGT00940000154883.h #22	ENSGT00940000164247.f	ENSGT00530000063484.b.b	ENSGT00950000183442	ENSGT00940000165165
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	205	ENSOARG00020016157	ENSOARG00020016165	ENSOARG00020016254	ENSOARG00020016273	ENSOARG00020016292	ENSOARG00020016312	ENSOARG00020016332	MAGEB1 (ENSOARG00020016373)	NR0B1 (ENSOARG00020016408)	CXorf21 (ENSOARG00020016502)	ENSOARG00020016575	TAB3 (ENSOARG00020017425)	ENSOARG00020017689	ENSOARG00020019485 #22	ENSOARG00020019542	ENSOARG00020019692 #22	ENSOARG00020019728 #22	ENSOARG00020019743	TMEM47 (ENSOARG00020019772)	ENSOARG00020019815	ENSOARG00020019898	ENSOARG00020020139	ENSOARG00020020152	ENSOARG00020020167	PRRG1 (ENSOARG00020020186)	ENSOARG00020020215	ENSOARG00020020237	ENSOARG00020020297	ENSOARG00020020310	ENSOARG00020020318	CYBB (ENSOARG00020020358)
Rambouillet Sheep	MODERN SPECIES	205	IL1RAPL1 (ENSOARG00020015893)	ENSOARG00020016037	ENSOARG00020016157	ENSOARG00020016165	ENSOARG00020016254	ENSOARG00020016273	ENSOARG00020016292	ENSOARG00020016312	ENSOARG00020016332	MAGEB1 (ENSOARG00020016373)	NR0B1 (ENSOARG00020016408)	CXorf21 (ENSOARG00020016502)	ENSOARG00020016575	TAB3 (ENSOARG00020017425)	ENSOARG00020017689	ENSOARG00020019485 #22	ENSOARG00020019542	ENSOARG00020019692 #22	ENSOARG00020019728 #22	ENSOARG00020019743	TMEM47 (ENSOARG00020019772)	ENSOARG00020019815	ENSOARG00020019898	ENSOARG00020020139	ENSOARG00020020152	ENSOARG00020020167	PRRG1 (ENSOARG00020020186)	ENSOARG00020020215	ENSOARG00020020237	ENSOARG00020020297	ENSOARG00020020310
Rambouillet Sheep	MODERN SPECIES	205	ENSOARG00020016165	ENSOARG00020016254	ENSOARG00020016273	ENSOARG00020016292	ENSOARG00020016312	ENSOARG00020016332	MAGEB1 (ENSOARG00020016373)	NR0B1 (ENSOARG00020016408)	CXorf21 (ENSOARG00020016502)	ENSOARG00020016575	TAB3 (ENSOARG00020017425)	ENSOARG00020017689	ENSOARG00020019485 #22	ENSOARG00020019542	ENSOARG00020019692 #22	ENSOARG00020019728 #22	ENSOARG00020019743	TMEM47 (ENSOARG00020019772)	ENSOARG00020019815	ENSOARG00020019898	ENSOARG00020020139	ENSOARG00020020152	ENSOARG00020020167	PRRG1 (ENSOARG00020020186)	ENSOARG00020020215	ENSOARG00020020237	ENSOARG00020020297	ENSOARG00020020310	ENSOARG00020020318	CYBB (ENSOARG00020020358)	DYNLT3 (ENSOARG00020020658)
Bovinae	ANCESTRAL SPECIES	32	ENSGT00940000163797.a.b	ENSGT00940000163797.a.a	ENSGT00940000165324	ENSGT01090000260076.b.b	ENSGT00390000013549.a.b.b.o.b	ENSGT00940000155485.a.a.a.b.g.a	ENSGT00940000164194	ENSGT00940000155485.a.b.e	ENSGT00940000155485.a.b.f	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.i.b	ENSGT00940000159499	ENSGT00940000154342.C	ENSGT00940000164247.f	ENSGT00940000154883.h #22	ENSGT00940000164247.e	ENSGT00530000063484.b.b	ENSGT00950000183442	ENSGT00940000162825.p.a	ENSGT00940000162825.p.b	ENSGT00940000159699	ENSGT00940000154914.hb	ENSGT00940000163254	ENSGT00940000165165	ENSGT00940000162492.x	ENSGT00950000182841.b.a.a.a.d.b.a.a.b	ENSGT00940000158538	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a.d.b.a.b	ENSGT00530000063186.a
Bos	DUPLICATION
Bos	DUPLICATION
Bos	ANCESTRAL SPECIES	256																ENSGT00940000154883.h.h.a #22	ENSGT00960000191436
Bos_b	ANCESTRAL SPECIES	39	ENSGT01090000260076.b.b	ENSGT00940000155485.a.a.a.b.g.a	ENSGT00940000164194.e	ENSGT00940000155485.a.b.e.a	ENSGT01090000260200	ENSGT00940000155485.a.a.a.a.c	ENSGT00940000155485.a.a.b.b	ENSGT00940000155485.a.b.e.b.b	ENSGT00940000155485.a.b.f	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.i.b	ENSGT00940000159499	ENSGT00940000154342.C	ENSGT00940000164247.f.b	ENSGT00940000154883.h.h.a #22	ENSGT00960000191436	ENSGT00940000154883.h.h.b #22	ENSGT00940000164247.e
Hybrid Bos Indicus	MODERN SPECIES	315	ENSBIXG00005021534	ENSBIXG00005021506	ENSBIXG00005021500	ENSBIXG00005007731	ENSBIXG00005021472	ENSBIXG00005021458	ENSBIXG00005021432	ENSBIXG00005021391	NR0B1 (ENSBIXG00005021373)	TASL (ENSBIXG00005003597)	ENSBIXG00005005994	TAB3 (ENSBIXG00005021056)	ENSBIXG00005007351	DMD (ENSBIXG00005003469)	ENSBIXG00005006877	ENSBIXG00005019196 #22	ENSBIXG00005019179	ENSBIXG00005003127	ENSBIXG00005019107	ENSBIXG00005019085	ENSBIXG00005019048	ENSBIXG00005002651	ENSBIXG00005019042 #22	ENSBIXG00005019027	ENSBIXG00005018989	TMEM47 (ENSBIXG00005018952)	ENSBIXG00005018937	ENSBIXG00005018926	ENSBIXG00005000061	ENSBIXG00005018909	ENSBIXG00005018813
Cow	MODERN SPECIES	177	PPP4R3C (ENSBTAG00000008511)	ENSBTAG00000052068	ENSBTAG00000054034	ENSBTAG00000011750	ENSBTAG00000050834	IL1RAPL1 (ENSBTAG00000053869)	MAGEB3 (ENSBTAG00000013995)	ENSBTAG00000032896	NR0B1 (ENSBTAG00000015532)	TASL (ENSBTAG00000008603)	GK (ENSBTAG00000008124)	ENSBTAG00000048795	TAB3 (ENSBTAG00000048159)	ENSBTAG00000008248	ENSBTAG00000053663	ENSBTAG00000050905 #22	ENSBTAG00000054277	ENSBTAG00000046838	ENSBTAG00000052471 #22	ENSBTAG00000054004	ENSBTAG00000049636	ENSBTAG00000040357	ENSBTAG00000012533	TMEM47 (ENSBTAG00000014304)	ENSBTAG00000040406	MAGEB16 (ENSBTAG00000038595)	ENSBTAG00000048711	ENSBTAG00000047410	ENSBTAG00000005749	H2AL1Q (ENSBTAG00000049451)	ENSBTAG00000048419
Bos_a	ANCESTRAL SPECIES	63	ENSGT00940000159951.c	ENSGT00940000159951.d.a.b	ENSGT00390000018199.b.b.b	ENSGT00390000013549.a.b.b.o.b	ENSGT00940000165324	ENSGT01090000260076.b.b	ENSGT00940000155485.a.a.a.b.g.a	ENSGT00940000155485.a.a.b.b	ENSGT00940000155485.a.b.e.b	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.i.b	ENSGT00940000159499	ENSGT00940000154342.C	ENSGT00940000164247.f.b	ENSGT00940000154883.h.h.a #22	ENSGT00960000191436	ENSGT01090000260501	ENSGT01100000264093	ENSGT00390000005568.gb.b.b.a.b.a	ENSGT00390000004755.sb.a.a	ENSGT01010000222906.e	ENSGT00960000193125	ENSGT00940000164247.f.a	ENSGT00950000182841.b.a.a.a.d.b.b	ENSGT00530000063484.b.b	ENSGT00940000162825.p.a	ENSGT00940000162825.p.b	ENSGT00940000159699	ENSGT00940000163254
Wild yak	MODERN SPECIES	1124															ENSBMUG00000016169	ENSBMUG00000016161 #22	ENSBMUG00000016145	DMD (ENSBMUG00000015527)
Bos	ANCESTRAL SPECIES	160																ENSGT00940000154883.h.h.b #22	ENSGT00940000164247.e
Bos_b	ANCESTRAL SPECIES	39	ENSGT00940000164194.e	ENSGT00940000155485.a.b.e.a	ENSGT01090000260200	ENSGT00940000155485.a.a.a.a.c	ENSGT00940000155485.a.a.b.b	ENSGT00940000155485.a.b.e.b.b	ENSGT00940000155485.a.b.f	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.i.b	ENSGT00940000159499	ENSGT00940000154342.C	ENSGT00940000164247.f.b	ENSGT00940000154883.h.h.a #22	ENSGT00960000191436	ENSGT00940000154883.h.h.b #22	ENSGT00940000164247.e
Hybrid Bos Indicus	MODERN SPECIES	315	ENSBIXG00005021391	NR0B1 (ENSBIXG00005021373)	TASL (ENSBIXG00005003597)	ENSBIXG00005005994	TAB3 (ENSBIXG00005021056)	ENSBIXG00005007351	DMD (ENSBIXG00005003469)	ENSBIXG00005006877	ENSBIXG00005019196 #22	ENSBIXG00005019179	ENSBIXG00005003127	ENSBIXG00005019107	ENSBIXG00005019085	ENSBIXG00005019048	ENSBIXG00005002651	ENSBIXG00005019042 #22	ENSBIXG00005019027	ENSBIXG00005018989	TMEM47 (ENSBIXG00005018952)	ENSBIXG00005018937	ENSBIXG00005018926	ENSBIXG00005000061	ENSBIXG00005018909	ENSBIXG00005018813	ENSBIXG00005018533	ENSBIXG00005018519	ENSBIXG00005018490	ENSBIXG00005018367	PRRG1 (ENSBIXG00005018330)	ENSBIXG00005018292	ENSBIXG00005002960
Cow	MODERN SPECIES	177	ENSBTAG00000011750	ENSBTAG00000050834	IL1RAPL1 (ENSBTAG00000053869)	MAGEB3 (ENSBTAG00000013995)	ENSBTAG00000032896	NR0B1 (ENSBTAG00000015532)	TASL (ENSBTAG00000008603)	GK (ENSBTAG00000008124)	ENSBTAG00000048795	TAB3 (ENSBTAG00000048159)	ENSBTAG00000008248	ENSBTAG00000053663	ENSBTAG00000050905 #22	ENSBTAG00000054277	ENSBTAG00000046838	ENSBTAG00000052471 #22	ENSBTAG00000054004	ENSBTAG00000049636	ENSBTAG00000040357	ENSBTAG00000012533	TMEM47 (ENSBTAG00000014304)	ENSBTAG00000040406	MAGEB16 (ENSBTAG00000038595)	ENSBTAG00000048711	ENSBTAG00000047410	ENSBTAG00000005749	H2AL1Q (ENSBTAG00000049451)	ENSBTAG00000048419	ENSBTAG00000050369	PRRG1 (ENSBTAG00000050233)	ENSBTAG00000046589
Bos	ANCESTRAL SPECIES	32	ENSGT00940000165324	ENSGT01090000260076.b.b	ENSGT00940000155485.a.a.a.b.g.a	ENSGT00940000164194.e	ENSGT00940000155485.a.b.e.a	ENSGT01090000260200	ENSGT00950000182925.D.a.a.b.b	ENSGT00950000182925.D.a.b.a.a.a.b	ENSGT00940000155485.a.b.f	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a.i.b	ENSGT00940000159499	ENSGT00940000154342.C	ENSGT00940000164247.f.b	ENSGT00940000154883.h.i #22	ENSGT00940000164247.f.a	ENSGT00950000182841.b.a.a.a.d.b.b	ENSGT00530000063484.b.b	ENSGT00950000183442	ENSGT00940000162825.p.a	ENSGT00940000162825.p.b	ENSGT00940000159699	ENSGT00940000154914.hb	ENSGT00940000163254	ENSGT00940000165165	ENSGT00940000162492.x	ENSGT00950000182841.b.a.a.a.d.b.a.a.b	ENSGT00940000158538	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a.d.b.a.b
Bos_a	ANCESTRAL SPECIES																	ENSGT00940000154883.h.i #22
Domestic yak	MODERN SPECIES	69	PPP4R3C (ENSBGRG00000011595)	ENSBGRG00000011440	ENSBGRG00000011327	IL1RAPL1 (ENSBGRG00000011049)	ENSBGRG00000010944	ENSBGRG00000010754	ENSBGRG00000010672	NR0B1 (ENSBGRG00000010583)	TASL (ENSBGRG00000010564)	ENSBGRG00000010176	TAB3 (ENSBGRG00000009952)	ENSBGRG00000009057	ENSBGRG00000008907	ENSBGRG00000008887	ENSBGRG00000008826	ENSBGRG00000008820 #22	ENSBGRG00000008800	ENSBGRG00000008651	ENSBGRG00000008617	ENSBGRG00000008605	ENSBGRG00000008590	ENSBGRG00000008563	ENSBGRG00000008513	ENSBGRG00000008441	ENSBGRG00000008430	TMEM47 (ENSBGRG00000008401)	ENSBGRG00000008355	ENSBGRG00000008290	ENSBGRG00000008253	ENSBGRG00000008170	ENSBGRG00000008137
Wild yak	MODERN SPECIES	2180											SEPTIN9 (ENSBMUG00000011646) #18	SEC14L1 (ENSBMUG00000011504) #19	ENSBMUG00000011424	MGAT5B (ENSBMUG00000011398) #20	MFSD11 (ENSBMUG00000011346) #21	ENSBMUG00000011300 #22	METTL23 (ENSBMUG00000011288)	ENSBMUG00000011264 #24	ENSBMUG00000011184	ST6GALNAC1 (ENSBMUG00000011160) #26	ST6GALNAC2 (ENSBMUG00000011119) #27	ENSBMUG00000011052	PRCD (ENSBMUG00000011034)	CYGB (ENSBMUG00000011016) #30	RHBDF2 (ENSBMUG00000010908) #31	ENSBMUG00000010779 #32	ENSBMUG00000010753 #32	UBE2O (ENSBMUG00000010728) #33	SPHK1 (ENSBMUG00000010702) #34	PRPSAP1 (ENSBMUG00000010666) #35	ENSBMUG00000010624 #36
Camelidae	ANCESTRAL SPECIES	38	ENSGT00390000002373	ENSGT00940000159620.a	ENSGT00390000014681 #7	ENSGT00510000047537.v #9	ENSGT00390000011093 #10	ENSGT00390000011309 #11	ENSGT00950000182935.B.a #12	ENSGT01050000244808.F #13	ENSGT01050000244894.a.a.a.b #14	ENSGT01050000244894.b.b #15	ENSGT00940000157598 #16	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.h #22	ENSGT00510000048008	ENSGT00940000156867.a #24	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096	ENSGT00940000155004 #30	ENSGT00940000159027 #31	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294 #36	ENSGT00390000009925.b	ENSGT00940000156895	ENSGT00390000003595
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES	204	ENSCDRG00005009046	IL1RAPL1 (ENSCDRG00005009133)	ENSCDRG00005009272	ENSCDRG00005009432	MAGEB3 (ENSCDRG00005009490)	ENSCDRG00005009494	NR0B1 (ENSCDRG00005009532)	ENSCDRG00005009584	TASL (ENSCDRG00005009607)	ENSCDRG00005009670	TAB3 (ENSCDRG00005011481)	FTHL17 (ENSCDRG00005011582)	DMD (ENSCDRG00005011880)	ENSCDRG00005018720 #22	ENSCDRG00005018746	ENSCDRG00005018755 #22	ENSCDRG00005018763	ENSCDRG00005018780	TMEM47 (ENSCDRG00005018793)	ENSCDRG00005018817	ENSCDRG00005018834	ENSCDRG00005018862	ENSCDRG00005018893	ENSCDRG00005018922	ENSCDRG00005018961	ENSCDRG00005018975	ENSCDRG00005019029	ENSCDRG00005019034	ENSCDRG00005019045	ENSCDRG00005019051	ENSCDRG00005019057
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES	7	ENSCDRG00005021024 #7	BIRC5 (ENSCDRG00005021055) #9	AFMID (ENSCDRG00005021067) #10	TK1 (ENSCDRG00005021081) #11	SYNGR2 (ENSCDRG00005021090) #12	ENSCDRG00005021098 #13	TMC8 (ENSCDRG00005021106) #14	TMC6 (ENSCDRG00005021116) #15	TNRC6C (ENSCDRG00005021137) #16	ENSCDRG00005021146 #18	ENSCDRG00005021152 #18	SEC14L1 (ENSCDRG00005021168) #19	ENSCDRG00005021193	MGAT5B (ENSCDRG00005021200) #20	MFSD11 (ENSCDRG00005021209) #21	ENSCDRG00005021215 #22	METTL23 (ENSCDRG00005021219)	JMJD6 (ENSCDRG00005021223) #24	ENSCDRG00005021232	ST6GALNAC1 (ENSCDRG00005003366) #26	ST6GALNAC2 (ENSCDRG00005003406) #27	PRCD (ENSCDRG00005003448)	CYGB (ENSCDRG00005003490) #30	RHBDF2 (ENSCDRG00005003540) #31	AANAT (ENSCDRG00005003684) #32	UBE2O (ENSCDRG00005003738) #33	SPHK1 (ENSCDRG00005003776) #34	PRPSAP1 (ENSCDRG00005003821) #35	QRICH2 (ENSCDRG00005003884) #36	ENSCDRG00005003985	RNF157 (ENSCDRG00005004048)
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES	22	CLINT1 (ENSCDRG00005000098)	LSM11 (ENSCDRG00005000153)	THG1L (ENSCDRG00005000166)	ENSCDRG00005000206	ADAM19 (ENSCDRG00005000255)	CYFIP2 (ENSCDRG00005000418)	FNDC9 (ENSCDRG00005000691)	ITK (ENSCDRG00005000713)	ENSCDRG00005000731	MED7 (ENSCDRG00005000741)	ENSCDRG00005000754	ENSCDRG00005000763	ENSCDRG00005000772	TIMD4 (ENSCDRG00005000785)	SGCD (ENSCDRG00005000807)	ENSCDRG00005000835 #22	MRPL22 (ENSCDRG00005000846)	GEMIN5 (ENSCDRG00005000876)	CNOT8 (ENSCDRG00005000944)	FAXDC2 (ENSCDRG00005000982)	LARP1 (ENSCDRG00005001014)	HAND1 (ENSCDRG00005001057)	SAP30L (ENSCDRG00005001071)	GALNT10 (ENSCDRG00005001110)	MFAP3 (ENSCDRG00005001182)	ENSCDRG00005001194	GRIA1 (ENSCDRG00005001234)	NMUR2 (ENSCDRG00005001477)	ENSCDRG00005001496	GLRA1 (ENSCDRG00005001506)	G3BP1 (ENSCDRG00005001514)
Arabian camel	MODERN SPECIES	204	ENSCDRG00005008930	PPP4R3C (ENSCDRG00005009000)	ENSCDRG00005009046	IL1RAPL1 (ENSCDRG00005009133)	ENSCDRG00005009272	ENSCDRG00005009432	MAGEB3 (ENSCDRG00005009490)	ENSCDRG00005009494	NR0B1 (ENSCDRG00005009532)	ENSCDRG00005009584	TASL (ENSCDRG00005009607)	ENSCDRG00005009670	TAB3 (ENSCDRG00005011481)	FTHL17 (ENSCDRG00005011582)	DMD (ENSCDRG00005011880)	ENSCDRG00005018720 #22	ENSCDRG00005018746	ENSCDRG00005018755 #22	ENSCDRG00005018763	ENSCDRG00005018780	TMEM47 (ENSCDRG00005018793)	ENSCDRG00005018817	ENSCDRG00005018834	ENSCDRG00005018862	ENSCDRG00005018893	ENSCDRG00005018922	ENSCDRG00005018961	ENSCDRG00005018975	ENSCDRG00005019029	ENSCDRG00005019034	ENSCDRG00005019045
Atlantogenata	ANCESTRAL SPECIES	50	ENSGT00940000163033	ENSGT00390000018199.b.b.b	ENSGT00950000182900.D.d.b	ENSGT00940000163797	ENSGT00940000165324	ENSGT01090000260076.b.b	ENSGT00940000155485	ENSGT00940000164194	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a	ENSGT00940000159499	ENSGT00940000158538	ENSGT01100000267055	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000160244	ENSGT00940000155009	ENSGT00390000015623
Xenarthra	ANCESTRAL SPECIES	1574																ENSGT00940000154883.h #22	ENSGT00940000164247	ENSGT00940000163515
Armadillo	MODERN SPECIES	671																ENSDNOG00000033905 #22	ENSDNOG00000025279	ENSDNOG00000047099	TMEM47 (ENSDNOG00000049706)
Afrotheria	ANCESTRAL SPECIES	184									ENSGT00940000155485.q	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a	ENSGT00940000159499	ENSGT01100000267055	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000158538	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000160244	ENSGT00940000155009
Afrotheria_a	ANCESTRAL SPECIES	185									ENSGT00940000155485.q	ENSGT00390000015719.d	ENSGT00390000011425.B	ENSGT01000000214434.B.b.e.a	ENSGT00940000159499	ENSGT01100000267055	ENSGT00940000154342.C	ENSGT00940000154883.h #22	ENSGT00940000158538	ENSGT00940000163515	ENSGT00950000182841.b.a.a.a	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000160244	ENSGT00940000155009
Elephant	MODERN SPECIES	573		ENSLAFG00000026633	NR0B1 (ENSLAFG00000028510)	ENSLAFG00000029211	TASL (ENSLAFG00000002822)	ENSLAFG00000007632	TAB3 (ENSLAFG00000011430)	ENSLAFG00000029280	ENSLAFG00000025588	ENSLAFG00000028272	ENSLAFG00000030106	ENSLAFG00000026733	ENSLAFG00000031012	ENSLAFG00000031420	ENSLAFG00000012722	ENSLAFG00000007469 #22	ENSLAFG00000022467	ENSLAFG00000026672	ENSLAFG00000028567	ENSLAFG00000028802	TMEM47 (ENSLAFG00000014908)	ENSLAFG00000011312	ENSLAFG00000027702	ENSLAFG00000026650	ENSLAFG00000031705	ENSLAFG00000014053	MAGEB16 (ENSLAFG00000000136)	ENSLAFG00000030786	ENSLAFG00000003949	ENSLAFG00000030864	ENSLAFG00000027564