Pecora	ANCESTRAL SPECIES	1	ENSGT00940000159620.a #8	ENSGT00390000014681 #9	ENSGT00390000011615.A #10	ENSGT00510000047537.v #11	ENSGT00390000011093 #12	ENSGT00390000011309 #13	ENSGT00950000182935.B.a #14	ENSGT01050000244894.a.a.a.b #15	ENSGT01050000244894.b.b #16	ENSGT00940000157598 #17	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00950000185984	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.g.b #22	ENSGT00510000048008 #23	ENSGT00940000156867.a #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00860000135966	ENSGT00520000058096 #28	ENSGT00940000155004 #29	ENSGT00940000159027 #30	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294	ENSGT00390000008825.b.b
Percora_a	ANCESTRAL SPECIES	2	ENSGT00940000159620.a #8	ENSGT00390000014681 #9	ENSGT00390000011615.A #10	ENSGT00510000047537.v #11	ENSGT00390000011093 #12	ENSGT00390000011309 #13	ENSGT00950000182935.B.a #14	ENSGT01050000244894.a.a.a.b #15	ENSGT01050000244894.b.b #16	ENSGT00940000157598 #17	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00950000185984	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.g.b #22	ENSGT00510000048008 #23	ENSGT00940000156867.a #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00860000135966	ENSGT00520000058096 #28	ENSGT00940000155004 #29	ENSGT00940000159027 #30	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294	ENSGT00390000008825.b.b
Siberian musk deer	MODERN SPECIES	1210	PGS1 (ENSMMSG00000023378) #7	SOCS3 (ENSMMSG00000023394) #8	ENSMMSG00000023396 #9	TMEM235 (ENSMMSG00000023402) #10	BIRC5 (ENSMMSG00000023409) #11	AFMID (ENSMMSG00000023421) #12	TK1 (ENSMMSG00000023436) #13	SYNGR2 (ENSMMSG00000023451) #14	TMC8 (ENSMMSG00000023462) #15	TMC6 (ENSMMSG00000023480) #16	TNRC6C (ENSMMSG00000023512) #17	SEPTIN9 (ENSMMSG00000023612) #18	SEC14L1 (ENSMMSG00000023651) #19	MGAT5B (ENSMMSG00000023699) #20	MFSD11 (ENSMMSG00000023737) #21	SRSF2 (ENSMMSG00000023746) #22	METTL23 (ENSMMSG00000023752) #23	JMJD6 (ENSMMSG00000023758) #24	ENSMMSG00000023765 #25	ST6GALNAC1 (ENSMMSG00000023772) #26	ST6GALNAC2 (ENSMMSG00000023782) #27	PRCD (ENSMMSG00000023794) #28	CYGB (ENSMMSG00000023800) #29	RHBDF2 (ENSMMSG00000023806) #30	ENSMMSG00000023823 #31	ENSMMSG00000023827 #32	UBE2O (ENSMMSG00000023833) #33	SPHK1 (ENSMMSG00000023869) #34	PRPSAP1 (ENSMMSG00000023875) #35	ENSMMSG00000023881 #36	ENSMMSG00000023888 #37
Bovidae	ANCESTRAL SPECIES	2	ENSGT00940000159620.a #8	ENSGT00390000014681 #9	ENSGT00390000011615.A #10	ENSGT00510000047537.v #11	ENSGT00390000011093 #12	ENSGT00390000011309 #13	ENSGT00950000182935.B.a #14	ENSGT01050000244894.a.a.a.b #15	ENSGT01050000244894.b.b #16	ENSGT00940000157598 #17	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00950000185984	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.g.b #22	ENSGT00510000048008 #23	ENSGT00940000156867.a #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00860000135966	ENSGT00520000058096 #28	ENSGT00940000155004 #29	ENSGT00940000159027 #30	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294	ENSGT00390000008825.b.b
Bovinae	ANCESTRAL SPECIES		ENSGT00940000159620.a #8	ENSGT00390000014681 #9	ENSGT00390000011615.A #10	ENSGT00510000047537.v #11	ENSGT00390000011093 #12	ENSGT00390000011309 #13	ENSGT00950000182935.B.a #14	ENSGT01050000244894.a.a.a.b #15	ENSGT01050000244894.b.b #16	ENSGT00940000157598 #17	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00950000185984	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.g.b #22	ENSGT00510000048008 #23	ENSGT00940000156867.a #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00520000058096 #28	ENSGT00940000155004 #29	ENSGT00940000159027 #30	ENSGT00390000015579.b.c #32	ENSGT00390000015579.b.d #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294	ENSGT00390000008825.b.b
Bos	ANCESTRAL SPECIES	1	ENSGT00940000159620.a #8	ENSGT00390000014681 #9	ENSGT00390000011615.A #10	ENSGT00510000047537.v #11	ENSGT00390000011093 #12	ENSGT00390000011309 #13	ENSGT00950000182935.B.a #14	ENSGT01050000244894.a.a.a.b #15	ENSGT01050000244894.b.b #16	ENSGT00940000157598 #17	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00950000185984	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.g.b #22	ENSGT00510000048008 #23	ENSGT00940000156867.a #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00960000191592	ENSGT00520000058096 #28	ENSGT00940000155004 #29	ENSGT00940000159027 #30	ENSGT00390000015579.b.c #32	ENSGT00390000015579.b.d #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294.h
Bos_b	ANCESTRAL SPECIES	21	ENSGT00940000159620.a #8	ENSGT00390000014681 #9	ENSGT00390000011615.A #10	ENSGT00510000047537.v #11	ENSGT00390000011093 #12	ENSGT00390000011309 #13	ENSGT00950000182935.B.a #14	ENSGT01050000244894.a.a.a.b #15	ENSGT01050000244894.b.b #16	ENSGT00940000157598 #17	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00950000185984	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.g.b #22	ENSGT00510000048008 #23	ENSGT00940000156867.a #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00960000191592	ENSGT00520000058096 #28	ENSGT00940000155004 #29	ENSGT00940000159027 #30	ENSGT00390000015579.b.c #32	ENSGT00390000015579.b.d #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294.h
Cow	MODERN SPECIES	10	SOCS3 (ENSBTAG00000008441) #8	THA1 (ENSBTAG00000009029) #9	TMEM235 (ENSBTAG00000024926) #10	BIRC5 (ENSBTAG00000013573) #11	AFMID (ENSBTAG00000007125) #12	TK1 (ENSBTAG00000007121) #13	SYNGR2 (ENSBTAG00000019069) #14	TMC8 (ENSBTAG00000019067) #15	TMC6 (ENSBTAG00000018661) #16	TNRC6C (ENSBTAG00000018658) #17	SEPTIN9 (ENSBTAG00000002633) #18	SEC14L1 (ENSBTAG00000013677) #19	ENSBTAG00000051647	MGAT5B (ENSBTAG00000005104) #20	MFSD11 (ENSBTAG00000018260) #21	SRSF2 (ENSBTAG00000018258) #22	METTL23 (ENSBTAG00000044138) #23	JMJD6 (ENSBTAG00000019153) #24	ENSBTAG00000051982 #25	ST6GALNAC1 (ENSBTAG00000001998) #26	ST6GALNAC2 (ENSBTAG00000015255) #27	ENSBTAG00000053829	CYGB (ENSBTAG00000005556) #29	RHBDF2 (ENSBTAG00000003436) #30	ENSBTAG00000053118 #32	AANAT (ENSBTAG00000050098) #32	UBE2O (ENSBTAG00000020115) #33	SPHK1 (ENSBTAG00000008507) #34	PRPSAP1 (ENSBTAG00000030172) #35	QRICH2 (ENSBTAG00000030173)	UBALD2 (ENSBTAG00000013792)
Hybrid Bos Indicus	MODERN SPECIES	10	ENSBIXG00005000242 #9	TMEM235 (ENSBIXG00005008634) #10	BIRC5 (ENSBIXG00005008609) #11	ENSBIXG00005008596	ENSBIXG00005008576 #12	TK1 (ENSBIXG00005006402) #13	SYNGR2 (ENSBIXG00005008511) #14	TMC8 (ENSBIXG00005008492) #15	TMC6 (ENSBIXG00005008474) #16	TNRC6C (ENSBIXG00005008368) #17	ENSBIXG00005008178	SEPTIN9 (ENSBIXG00005008121) #18	SEC14L1 (ENSBIXG00005008015) #19	MGAT5B (ENSBIXG00005007961) #20	MFSD11 (ENSBIXG00005007937) #21	SRSF2 (ENSBIXG00005000023) #22	METTL23 (ENSBIXG00005007880) #23	ENSBIXG00005029269 #24	ST6GALNAC1 (ENSBIXG00005029310) #26	ST6GALNAC2 (ENSBIXG00005029323) #27	ENSBIXG00005029339	PRCD (ENSBIXG00005029354) #28	ENSBIXG00005029360 #29	RHBDF2 (ENSBIXG00005029382) #30	ENSBIXG00005029407 #32	ENSBIXG00005029415 #32	UBE2O (ENSBIXG00005029423) #33	SPHK1 (ENSBIXG00005029471) #34	PRPSAP1 (ENSBIXG00005029489) #35	QRICH2 (ENSBIXG00005029513)	UBALD2 (ENSBIXG00005029543)
Bos_a	ANCESTRAL SPECIES		ENSGT00940000159620.a #8	ENSGT00390000014681 #9	ENSGT00390000011615.A #10	ENSGT00510000047537.v #11	ENSGT00390000011093 #12	ENSGT00390000011309 #13	ENSGT00950000182935.B.a #14	ENSGT01050000244894.a.a.a.b #15	ENSGT01050000244894.b.b #16	ENSGT00940000157598 #17	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00950000185984	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.g.b #22	ENSGT00510000048008 #23	ENSGT00940000156867.a #24	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00960000191592	ENSGT00520000058096 #28	ENSGT00940000155004 #29	ENSGT00940000159027 #30	ENSGT00390000015579.b.d.a #32	ENSGT00390000015579.b.d.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294.h	ENSGT00390000008825.b.b
Domestic yak	MODERN SPECIES	10	SOCS3 (ENSBGRG00000017084) #8	ENSBGRG00000016929 #9	TMEM235 (ENSBGRG00000016880) #10	BIRC5 (ENSBGRG00000016705) #11	AFMID (ENSBGRG00000016461) #12	TK1 (ENSBGRG00000016350) #13	SYNGR2 (ENSBGRG00000016265) #14	TMC8 (ENSBGRG00000015838) #15	TMC6 (ENSBGRG00000015167) #16	TNRC6C (ENSBGRG00000013779) #17	SEPTIN9 (ENSBGRG00000013145) #18	SEC14L1 (ENSBGRG00000012852) #19	ENSBGRG00000012809	MGAT5B (ENSBGRG00000012141) #20	MFSD11 (ENSBGRG00000011899) #21	SRSF2 (ENSBGRG00000011845) #22	METTL23 (ENSBGRG00000011764) #23	ENSBGRG00000011511 #24	ENSBGRG00000011356	ST6GALNAC1 (ENSBGRG00000011272) #26	ST6GALNAC2 (ENSBGRG00000011048) #27	PRCD (ENSBGRG00000010938) #28	CYGB (ENSBGRG00000010778) #29	ENSBGRG00000025308	RHBDF2 (ENSBGRG00000025250) #30	ENSBGRG00000025233 #32	ENSBGRG00000025217 #32	UBE2O (ENSBGRG00000025088) #33	SPHK1 (ENSBGRG00000025062) #34	PRPSAP1 (ENSBGRG00000024978) #35	ENSBGRG00000024959
American bison	MODERN SPECIES	3285	SOCS3 (ENSBBBG00000018786) #8	ENSBBBG00000004733 #9	TMEM235 (ENSBBBG00000004738) #10	ENSBBBG00000018840 #11	AFMID (ENSBBBG00000018881) #12	TK1 (ENSBBBG00000018905) #13	SYNGR2 (ENSBBBG00000004785) #14	TMC8 (ENSBBBG00000009153) #15	TMC6 (ENSBBBG00000004871) #16	TNRC6C (ENSBBBG00000019121) #17	SEPTIN9 (ENSBBBG00000019364) #18	SEC14L1 (ENSBBBG00000019477) #19	ENSBBBG00000005253	MGAT5B (ENSBBBG00000019525) #20	MFSD11 (ENSBBBG00000005195) #21	SRSF2 (ENSBBBG00000005332) #22	METTL23 (ENSBBBG00000019677) #23	JMJD6 (ENSBBBG00000019708) #24	ENSBBBG00000019719	ST6GALNAC1 (ENSBBBG00000019727) #26	ST6GALNAC2 (ENSBBBG00000005156) #27	PRCD (ENSBBBG00000019742) #28	CYGB (ENSBBBG00000019751) #29	RHBDF2 (ENSBBBG00000005356) #30	ENSBBBG00000019787 #32	ENSBBBG00000019798 #32	UBE2O (ENSBBBG00000005143) #33	SPHK1 (ENSBBBG00000019834) #34	PRPSAP1 (ENSBBBG00000019850) #35	QRICH2 (ENSBBBG00000019903)	UBALD2 (ENSBBBG00000019916)
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000159620.a #8	ENSGT00390000014681 #9	ENSGT00390000011615.A #10	ENSGT00510000047537.v #11	ENSGT00390000011093 #12	ENSGT00390000011309 #13	ENSGT00950000182935.B.a #14	ENSGT01050000244894.a.a.a.b #15	ENSGT01050000244894.b.b #16	ENSGT00940000157598 #17	ENSGT00940000157195 #18	ENSGT00940000155386 #19	ENSGT00950000185984	ENSGT00940000153470.a.b.b #20	ENSGT00390000012918.c #21	ENSGT00940000154883.g.b #22	ENSGT00510000048008 #23	ENSGT00940000156867.a #24	ENSGT00940000163380 #25	ENSGT00940000159930 #26	ENSGT00940000160433 #27	ENSGT00860000135966	ENSGT00520000058096 #28	ENSGT00940000155004 #29	ENSGT00940000159027 #30	ENSGT00390000015579.b #32	ENSGT00940000160755 #33	ENSGT00940000157864 #34	ENSGT00950000182803.A.a.b #35	ENSGT00940000161294	ENSGT00390000008825.b.b
Goat	MODERN SPECIES	10	ENSCHIG00000026867 #9	TMEM235 (ENSCHIG00000020609) #10	ENSCHIG00000013296 #11	AFMID (ENSCHIG00000026706) #12	TK1 (ENSCHIG00000016895) #13	SYNGR2 (ENSCHIG00000008367) #14	TMC8 (ENSCHIG00000023556) #15	TMC6 (ENSCHIG00000015724) #16	TNRC6C (ENSCHIG00000026004) #17	SEPTIN9 (ENSCHIG00000026942) #18	ENSCHIG00000014296	SEC14L1 (ENSCHIG00000017729) #19	MGAT5B (ENSCHIG00000017785) #20	MFSD11 (ENSCHIG00000025495) #21	ENSCHIG00000010641	SRSF2 (ENSCHIG00000017001) #22	METTL23 (ENSCHIG00000003411) #23	ENSCHIG00000022054 #24	ENSCHIG00000009258 #25	ST6GALNAC1 (ENSCHIG00000025600) #26	ST6GALNAC2 (ENSCHIG00000018016) #27	ENSCHIG00000018107	PRCD (ENSCHIG00000025107) #28	CYGB (ENSCHIG00000020026) #29	RHBDF2 (ENSCHIG00000024617) #30	ENSCHIG00000017245 #32	AANAT (ENSCHIG00000021269) #32	UBE2O (ENSCHIG00000025255) #33	SPHK1 (ENSCHIG00000021681) #34	PRPSAP1 (ENSCHIG00000026531) #35	ENSCHIG00000022043
Rambouillet Sheep	MODERN SPECIES	2	ENSOARG00020009908 #9	TMEM235 (ENSOARG00020009890) #10	ENSOARG00020018998	ENSOARG00020018892 #11	AFMID (ENSOARG00020018639) #12	TK1 (ENSOARG00020018573) #13	SYNGR2 (ENSOARG00020018496) #14	TMC8 (ENSOARG00020018447) #15	TMC6 (ENSOARG00020017886) #16	TNRC6C (ENSOARG00020017467) #17	SEPTIN9 (ENSOARG00020016929) #18	SEC14L1 (ENSOARG00020016741) #19	ENSOARG00020016717	MGAT5B (ENSOARG00020016194) #20	MFSD11 (ENSOARG00020016069) #21	SRSF2 (ENSOARG00020016027) #22	METTL23 (ENSOARG00020015955) #23	JMJD6 (ENSOARG00020015823) #24	ENSOARG00020015694 #25	ENSOARG00020015648	ST6GALNAC1 (ENSOARG00020015509) #26	ST6GALNAC2 (ENSOARG00020015447) #27	PRCD (ENSOARG00020015339) #28	CYGB (ENSOARG00020015249) #29	RHBDF2 (ENSOARG00020015074) #30	ENSOARG00020015002 #32	AANAT (ENSOARG00020014913) #32	UBE2O (ENSOARG00020014730) #33	ENSOARG00020014595 #34	PRPSAP1 (ENSOARG00020014503) #35	QRICH2 (ENSOARG00020013629)
Yarkand deer	MODERN SPECIES	28	PGS1 (ENSCHYG00000014050) #7	SOCS3 (ENSCHYG00000014205) #8	ENSCHYG00000014236 #9	ENSCHYG00000014389 #10	BIRC5 (ENSCHYG00000014457) #11	AFMID (ENSCHYG00000014537) #12	TK1 (ENSCHYG00000014728) #13	SYNGR2 (ENSCHYG00000014850) #14	TMC8 (ENSCHYG00000014924) #15	TMC6 (ENSCHYG00000015274) #16	TNRC6C (ENSCHYG00000015809) #17	SEPTIN9 (ENSCHYG00000017056) #18	SEC14L1 (ENSCHYG00000018112) #19	MGAT5B (ENSCHYG00000018846) #20	MFSD11 (ENSCHYG00000018983) #21	SRSF2 (ENSCHYG00000019285) #22	METTL23 (ENSCHYG00000019362) #23	ENSCHYG00000019451 #24	ENSCHYG00000019683	ST6GALNAC1 (ENSCHYG00000019718) #26	ENSCHYG00000019873 #27	PRCD (ENSCHYG00000020099) #28	ENSCHYG00000020138 #29	RHBDF2 (ENSCHYG00000020208) #30	AANAT (ENSCHYG00000020492) #32	UBE2O (ENSCHYG00000020621) #33	SPHK1 (ENSCHYG00000020870) #34	PRPSAP1 (ENSCHYG00000020917) #35	QRICH2 (ENSCHYG00000021035)	UBALD2 (ENSCHYG00000021331)	RNF157 (ENSCHYG00000021351)