Rodentia	ANCESTRAL SPECIES		ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000154802 #31	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000154802 #31	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37	ENSGT00940000156132
Lesser Egyptian jerboa	MODERN SPECIES	69	ENSJJAG00000021945 #7	Bcl9 (ENSJJAG00000020720) #8	ENSJJAG00000023016 #9	Fmo5 (ENSJJAG00000018621) #10	Prkab2 (ENSJJAG00000023668) #11	ENSJJAG00000019713 #12	ENSJJAG00000010827 #13	Notch2 (ENSJJAG00000013302) #14	Reg4 (ENSJJAG00000000579) #15	ENSJJAG00000017734 #16	Phgdh (ENSJJAG00000014448) #17	Zfp697 (ENSJJAG00000017598) #18	Rtca (ENSJJAG00000016178) #19	Cdc14a (ENSJJAG00000022290) #20	Gpr88 (ENSJJAG00000012613) #21	Vcam1 (ENSJJAG00000015695) #22	Extl2 (ENSJJAG00000014735) #23	Slc30a7 (ENSJJAG00000002926) #24	Dph5 (ENSJJAG00000008927) #25	ENSJJAG00000019910 #26	S1pr1 (ENSJJAG00000010551) #27	Olfm3 (ENSJJAG00000010747) #28	Col11a1 (ENSJJAG00000018420) #29	Rnpc3 (ENSJJAG00000010203) #30	ENSJJAG00000023262 #31	ENSJJAG00000021129 #32	ENSJJAG00000019466 #33	ENSJJAG00000024217 #34	Ntng1 (ENSJJAG00000017290) #35	ENSJJAG00000016898 #36	Slc25a54 (ENSJJAG00000014843) #37
Muroidea	ANCESTRAL SPECIES	6	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37	ENSGT00940000156132
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00900000143406	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00900000143406	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00900000143406	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37
Golden Hamster	MODERN SPECIES	685	Plppr5 (ENSMAUG00000016119)	Plppr4 (ENSMAUG00000015134)	4930455H04Rik (ENSMAUG00000014234)	Palmd (ENSMAUG00000000047)	Frrs1 (ENSMAUG00000015585)	Agl (ENSMAUG00000018070)	Slc35a3 (ENSMAUG00000014052)	Mfsd14a (ENSMAUG00000013973)	Sass6 (ENSMAUG00000013026)	Trmt13 (ENSMAUG00000010448)	Lrrc39 (ENSMAUG00000012983)	Dbt (ENSMAUG00000009415)	Rtca (ENSMAUG00000008488) #19	Cdc14a (ENSMAUG00000010773) #20	Gpr88 (ENSMAUG00000008453) #21	Vcam1 (ENSMAUG00000003872) #22	Extl2 (ENSMAUG00000001265) #23	Slc30a7 (ENSMAUG00000004112) #24	ENSMAUG00000000799 #25	S1pr1 (ENSMAUG00000000406) #27
Chinese hamster chok1gshd	MODERN SPECIES	66	Snx7 (ENSCGRG00001013988)	Plppr5 (ENSCGRG00001020652)	Plppr4 (ENSCGRG00001012705)	Palmd (ENSCGRG00001022454)	Frrs1 (ENSCGRG00001014946)	Agl (ENSCGRG00001009759)	Slc35a3 (ENSCGRG00001022960)	Mfsd14a (ENSCGRG00001016011)	Sass6 (ENSCGRG00001013533)	Trmt13 (ENSCGRG00001021601)	Lrrc39 (ENSCGRG00001018866)	Dbt (ENSCGRG00001006791)	Rtca (ENSCGRG00001013163) #19	Cdc14a (ENSCGRG00001017175) #20	Gpr88 (ENSCGRG00001002219) #21	Vcam1 (ENSCGRG00001024657) #22	Extl2 (ENSCGRG00001024980) #23	Slc30a7 (ENSCGRG00001023886) #24	Dph5 (ENSCGRG00001009169) #25	S1pr1 (ENSCGRG00001011713) #27	Olfm3 (ENSCGRG00001016627) #28	Col11a1 (ENSCGRG00001017937) #29	Rnpc3 (ENSCGRG00001019276) #30	ENSCGRG00001017818 #33	ENSCGRG00001017218 #33	ENSCGRG00001007458	Prmt6 (ENSCGRG00001012887)	ENSCGRG00001020698	Ntng1 (ENSCGRG00001011308) #35	Vav3 (ENSCGRG00001015668) #36	Slc25a24 (ENSCGRG00001017550)
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00900000143406	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37
Prairie vole	MODERN SPECIES	8	Snx7 (ENSMOCG00000002748)	Plppr5 (ENSMOCG00000002212)	Plppr4 (ENSMOCG00000000579)	Palmd (ENSMOCG00000017830)	Frrs1 (ENSMOCG00000012319)	Agl (ENSMOCG00000005987)	Slc35a3 (ENSMOCG00000006761)	Mfsd14a (ENSMOCG00000020163)	Sass6 (ENSMOCG00000000451)	Trmt13 (ENSMOCG00000019914)	Lrrc39 (ENSMOCG00000009871)	ENSMOCG00000005101	Rtca (ENSMOCG00000016660) #19	Cdc14a (ENSMOCG00000019291) #20	Gpr88 (ENSMOCG00000012199) #21	Vcam1 (ENSMOCG00000007722) #22	Extl2 (ENSMOCG00000017740) #23	Slc30a7 (ENSMOCG00000016516) #24	Dph5 (ENSMOCG00000006847) #25	ENSMOCG00000021611	S1pr1 (ENSMOCG00000019832) #27	Olfm3 (ENSMOCG00000022243) #28	Cd53 (ENSMOCG00000017858)	ENSMOCG00000010023	Lrif1 (ENSMOCG00000013810)	Dram2 (ENSMOCG00000018158)	Cept1 (ENSMOCG00000014223)	Dennd2d (ENSMOCG00000020692)	Chil6 (ENSMOCG00000000792)	Ap4b1 (ENSMOCG00000002528)	Dclre1b (ENSMOCG00000014786)
Northern American deer mouse	MODERN SPECIES	19	4930455H04Rik (ENSPEMG00000015603)	Palmd (ENSPEMG00000014442)	Frrs1 (ENSPEMG00000013390)	ENSPEMG00000024419	Agl (ENSPEMG00000012024)	ENSPEMG00000025435 ##26	Slc35a3 (ENSPEMG00000009061)	Mfsd14a (ENSPEMG00000007486)	Sass6 (ENSPEMG00000001964)	Trmt13 (ENSPEMG00000000275)	Lrrc39 (ENSPEMG00000019068)	Dbt (ENSPEMG00000018837)	Rtca (ENSPEMG00000018582) #19	Cdc14a (ENSPEMG00000016136) #20	Gpr88 (ENSPEMG00000025413) #21	Vcam1 (ENSPEMG00000011892) #22	Extl2 (ENSPEMG00000011176) #23	Slc30a7 (ENSPEMG00000029404) #24	Dph5 (ENSPEMG00000025433) #25	S1pr1 (ENSPEMG00000028825) #27	Olfm3 (ENSPEMG00000020151) #28	Col11a1 (ENSPEMG00000017917) #29	Rnpc3 (ENSPEMG00000020112) #30	Amy1 (ENSPEMG00000029201)	ENSPEMG00000012886	ENSPEMG00000027658 #33	ENSPEMG00000030588 #33	ENSPEMG00000026869 #33	Prmt6 (ENSPEMG00000014774)	Ntng1 (ENSPEMG00000016239) #35	Vav3 (ENSPEMG00000000426) #36
Murinae	ANCESTRAL SPECIES	5	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00900000143406	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37
Mus	ANCESTRAL SPECIES	7	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00900000143406	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37
Mus_A	ANCESTRAL SPECIES	9	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00900000143406	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37
Mus_B	ANCESTRAL SPECIES	8	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00900000143406	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37
Mus_C	ANCESTRAL SPECIES	6	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00900000143406	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37
Steppe mouse	MODERN SPECIES	3268	ENSMSIG00000006393	Palmd (ENSMSIG00000006299)	Frrs1 (ENSMSIG00000006123)	Agl (ENSMSIG00000006035)	Slc35a3 (ENSMSIG00000006013)	Mfsd14a (ENSMSIG00000005946)	Sass6 (ENSMSIG00000005689)	Trmt13 (ENSMSIG00000005639)	Lrrc39 (ENSMSIG00000005604)	Dbt (ENSMSIG00000005569)	ENSMSIG00000005524	ENSMSIG00000005461 #19	ENSMSIG00000005433	Cdc14a (ENSMSIG00000005239) #20	Gpr88 (ENSMSIG00000005216) #21	Vcam1 (ENSMSIG00000005169) #22	Extl2 (ENSMSIG00000005127) #23	Slc30a7 (ENSMSIG00000005095) #24	Dph5 (ENSMSIG00000005061) #25	ENSMSIG00000005056	S1pr1 (ENSMSIG00000005050) #27	Olfm3 (ENSMSIG00000004986) #28	ENSMSIG00000004970	Col11a1 (ENSMSIG00000004832) #29	Rnpc3 (ENSMSIG00000004723) #30	Amy1 (ENSMSIG00000004684)	ENSMSIG00000004660
spretus	MODERN SPECIES	12	Plppr4 (MGP_SPRETEiJ_G0026527)	4930455H04Rik (MGP_SPRETEiJ_G0026526)	Palmd (MGP_SPRETEiJ_G0026525)	MGP_SPRETEiJ_G0026524	Agl (MGP_SPRETEiJ_G0026523)	Slc35a3 (MGP_SPRETEiJ_G0026522)	MGP_SPRETEiJ_G0026521	Mfsd14a (MGP_SPRETEiJ_G0026520)	Sass6 (MGP_SPRETEiJ_G0026519)	Trmt13 (MGP_SPRETEiJ_G0026518)	Lrrc39 (MGP_SPRETEiJ_G0026517)	Dbt (MGP_SPRETEiJ_G0026516)	Rtca (MGP_SPRETEiJ_G0026515) #19	Cdc14a (MGP_SPRETEiJ_G0026514) #20	Gpr88 (MGP_SPRETEiJ_G0026513) #21	Vcam1 (MGP_SPRETEiJ_G0026512) #22	Extl2 (MGP_SPRETEiJ_G0026511) #23	Slc30a7 (MGP_SPRETEiJ_G0026510) #24	MGP_SPRETEiJ_G0026509 #25	S1pr1 (MGP_SPRETEiJ_G0026508) #27	Olfm3 (MGP_SPRETEiJ_G0026507) #28	Col11a1 (MGP_SPRETEiJ_G0026506) #29	Rnpc3 (MGP_SPRETEiJ_G0026505) #30	Amy1 (MGP_SPRETEiJ_G0026504)	MGP_SPRETEiJ_G0026503 #33	MGP_SPRETEiJ_G0026502 #33	Prmt6 (MGP_SPRETEiJ_G0026500)	Ntng1 (MGP_SPRETEiJ_G0026499) #35	Vav3 (MGP_SPRETEiJ_G0026498) #36	Slc25a24 (MGP_SPRETEiJ_G0026497)	Slc25a54 (MGP_SPRETEiJ_G0026496) #37
Mouse	MODERN SPECIES	12	Plppr4 (ENSMUSG00000044667)	4930455H04Rik (ENSMUSG00000080907)	Palmd (ENSMUSG00000033377)	Frrs1 (ENSMUSG00000033386)	Agl (ENSMUSG00000033400)	Slc35a3 (ENSMUSG00000027957)	Gm43191 (ENSMUSG00000105103)	Mfsd14a (ENSMUSG00000089911)	Sass6 (ENSMUSG00000027959)	Trmt13 (ENSMUSG00000033439)	Lrrc39 (ENSMUSG00000027961)	Dbt (ENSMUSG00000000340)	Rtca (ENSMUSG00000000339) #19	Cdc14a (ENSMUSG00000033502) #20	Gpr88 (ENSMUSG00000068696) #21	Vcam1 (ENSMUSG00000027962) #22	Extl2 (ENSMUSG00000027963) #23	Slc30a7 (ENSMUSG00000054414) #24	Dph5 (ENSMUSG00000033554) #25	S1pr1 (ENSMUSG00000045092) #27	Olfm3 (ENSMUSG00000027965) #28	Col11a1 (ENSMUSG00000027966) #29	Rnpc3 (ENSMUSG00000027981) #30	Amy1 (ENSMUSG00000074264)	Amy2a1 (ENSMUSG00000070360) #33	Amy2a2 (ENSMUSG00000096569) #33	Amy2a3 (ENSMUSG00000093931) #33	Amy2a4 (ENSMUSG00000096770) #33	Amy2a5 (ENSMUSG00000074268) #33	Prmt6 (ENSMUSG00000049300)	Ntng1 (ENSMUSG00000059857) #35
Ryukyu mouse	MODERN SPECIES	12	Plppr4 (MGP_CAROLIEiJ_G0025577)	4930455H04Rik (MGP_CAROLIEiJ_G0025576)	Palmd (MGP_CAROLIEiJ_G0025575)	Frrs1 (MGP_CAROLIEiJ_G0025574)	Agl (MGP_CAROLIEiJ_G0025573)	Slc35a3 (MGP_CAROLIEiJ_G0025572)	MGP_CAROLIEiJ_G0025571	Mfsd14a (MGP_CAROLIEiJ_G0025570)	Sass6 (MGP_CAROLIEiJ_G0025569)	Trmt13 (MGP_CAROLIEiJ_G0025568)	Lrrc39 (MGP_CAROLIEiJ_G0025567)	Dbt (MGP_CAROLIEiJ_G0025566)	Rtca (MGP_CAROLIEiJ_G0025565) #19	Cdc14a (MGP_CAROLIEiJ_G0025564) #20	Gpr88 (MGP_CAROLIEiJ_G0025563) #21	Vcam1 (MGP_CAROLIEiJ_G0025562) #22	Extl2 (MGP_CAROLIEiJ_G0025561) #23	Slc30a7 (MGP_CAROLIEiJ_G0025560) #24	MGP_CAROLIEiJ_G0025559 #25	S1pr1 (MGP_CAROLIEiJ_G0025558) #27	Olfm3 (MGP_CAROLIEiJ_G0025557) #28	Col11a1 (MGP_CAROLIEiJ_G0025556) #29	Rnpc3 (MGP_CAROLIEiJ_G0025555) #30	Amy1 (MGP_CAROLIEiJ_G0025554)	MGP_CAROLIEiJ_G0025553 #33	MGP_CAROLIEiJ_G0025552 #33	Prmt6 (MGP_CAROLIEiJ_G0025550)	Ntng1 (MGP_CAROLIEiJ_G0025549) #35	Vav3 (MGP_CAROLIEiJ_G0025548) #36	Slc25a24 (MGP_CAROLIEiJ_G0025547)	Slc25a54 (MGP_CAROLIEiJ_G0025546) #37
Shrew mouse	MODERN SPECIES	17	Plppr4 (MGP_PahariEiJ_G0027023)	MGP_PahariEiJ_G0027022	Palmd (MGP_PahariEiJ_G0027021)	MGP_PahariEiJ_G0027020	Agl (MGP_PahariEiJ_G0027019)	MGP_PahariEiJ_G0027018	MGP_PahariEiJ_G0027017	Mfsd14a (MGP_PahariEiJ_G0027016)	Sass6 (MGP_PahariEiJ_G0027015)	Trmt13 (MGP_PahariEiJ_G0027014)	Lrrc39 (MGP_PahariEiJ_G0027013)	Dbt (MGP_PahariEiJ_G0027012)	Rtca (MGP_PahariEiJ_G0027011) #19	Cdc14a (MGP_PahariEiJ_G0027010) #20	Gpr88 (MGP_PahariEiJ_G0027009) #21	Vcam1 (MGP_PahariEiJ_G0027008) #22	Extl2 (MGP_PahariEiJ_G0027007) #23	Slc30a7 (MGP_PahariEiJ_G0027006) #24	Dph5 (MGP_PahariEiJ_G0027005) #25	S1pr1 (MGP_PahariEiJ_G0027004) #27	Olfm3 (MGP_PahariEiJ_G0027003) #28	Col11a1 (MGP_PahariEiJ_G0027002) #29	Rnpc3 (MGP_PahariEiJ_G0027001) #30	Amy1 (MGP_PahariEiJ_G0027000)	MGP_PahariEiJ_G0026999 #33	MGP_PahariEiJ_G0026998 #33	MGP_PahariEiJ_G0026997	Prmt6 (MGP_PahariEiJ_G0026996)	Ntng1 (MGP_PahariEiJ_G0026995) #35	Vav3 (MGP_PahariEiJ_G0026994) #36	Slc25a24 (MGP_PahariEiJ_G0026993)
Rat	MODERN SPECIES	11	Plppr4 (ENSRNOG00000016872)	AABR07013065.1 (ENSRNOG00000055846)	AABR07013057.1 (ENSRNOG00000060159)	4930455H04Rik (ENSRNOG00000070759)	Palmd (ENSRNOG00000058609)	Frrs1 (ENSRNOG00000016351)	Agl (ENSRNOG00000016214)	Hiat1-ps1 (ENSRNOG00000015502)	Sass6 (ENSRNOG00000015211)	Trmt13 (ENSRNOG00000015140)	Lrrc39 (ENSRNOG00000015117)	Dbt (ENSRNOG00000015029)	Rtca (ENSRNOG00000014575) #19	Cdc14a (ENSRNOG00000014515) #20	Gpr88 (ENSRNOG00000026953) #21	Vcam1 (ENSRNOG00000014333) #22	Extl2 (ENSRNOG00000014323) #23	Slc30a7 (ENSRNOG00000013912) #24	Dph5 (ENSRNOG00000013719) #25	S1pr1 (ENSRNOG00000013683) #27	ENSRNOG00000064220	Olfm3 (ENSRNOG00000017969) #28	Col11a1 (ENSRNOG00000023148) #29	LOC120100611 (ENSRNOG00000063834)	Rnpc3 (ENSRNOG00000017310) #30	Amy1 (ENSRNOG00000064517)	LOC103689940 (ENSRNOG00000069596) #33	Amy2a3 (ENSRNOG00000065221) #33	LOC120100610 (ENSRNOG00000064952) #33	LOC120100609 (ENSRNOG00000063693) #33	ENSRNOG00000069066
Upper Galilee mountains blind mole rat	MODERN SPECIES	1209													Rtca (ENSNGAG00000011540) #19	Cdc14a (ENSNGAG00000021646) #20	Gpr88 (ENSNGAG00000024375) #21	Vcam1 (ENSNGAG00000016037) #22	Extl2 (ENSNGAG00000022949) #23	Slc30a7 (ENSNGAG00000022620) #24	Dph5 (ENSNGAG00000023132) #25	S1pr1 (ENSNGAG00000018227) #27
Kangaroo rat	MODERN SPECIES	458					Palmd (ENSDORG00000014198)	Frrs1 (ENSDORG00000011577)	Agl (ENSDORG00000003650)	Slc35a3 (ENSDORG00000024686)	Mfsd14a (ENSDORG00000007700)	Sass6 (ENSDORG00000002711)	Trmt13 (ENSDORG00000015808)	Lrrc39 (ENSDORG00000015809)	Dbt (ENSDORG00000015810)	Rtca (ENSDORG00000005448) #19	Cdc14a (ENSDORG00000005650) #20	Vcam1 (ENSDORG00000004927) #22	Extl2 (ENSDORG00000028286) #23	Slc30a7 (ENSDORG00000013733) #24	Dph5 (ENSDORG00000013735) #25	S1pr1 (ENSDORG00000001655) #27	Olfm3 (ENSDORG00000014572) #28	Col11a1 (ENSDORG00000011841) #29	Rnpc3 (ENSDORG00000027343) #30	ENSDORG00000024040	ENSDORG00000028663 #31	ENSDORG00000029904	ENSDORG00000026222	ENSDORG00000026353
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000154802 #31	ENSGT00940000160961	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37
Sciuridae	ANCESTRAL SPECIES		ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00860000136099	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163532 #33	ENSGT00940000154802 #31	ENSGT00940000160961	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37	ENSGT00940000156132
Marmotini	ANCESTRAL SPECIES	97						ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b.e.a #19	ENSGT00530000063718.a.a.f	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163532 #33	ENSGT00940000154802 #31	ENSGT00940000160961	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37	ENSGT01030000235200
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	84					ENSMMMG00000007885	SLC35A3 (ENSMMMG00000007910)	MFSD14A (ENSMMMG00000007927)	SASS6 (ENSMMMG00000007946)	TRMT13 (ENSMMMG00000008087)	LRRC39 (ENSMMMG00000008107)	DBT (ENSMMMG00000008128)	RTCA (ENSMMMG00000008151) #19	ENSMMMG00000008166	CDC14A (ENSMMMG00000008178) #20	ENSMMMG00000008224 #22	ENSMMMG00000008239 #22	EXTL2 (ENSMMMG00000008252) #23	SLC30A7 (ENSMMMG00000008265) #24	DPH5 (ENSMMMG00000008290) #25	S1PR1 (ENSMMMG00000008298) #27	OLFM3 (ENSMMMG00000008315) #28	COL11A1 (ENSMMMG00000008346) #29	ENSMMMG00000008459	ENSMMMG00000008465	RNPC3 (ENSMMMG00000008477) #30	ENSMMMG00000008515 #33	ENSMMMG00000008564 #31	PRMT6 (ENSMMMG00000008646)	NTNG1 (ENSMMMG00000008654) #35	VAV3 (ENSMMMG00000008992) #36	SLC25A24 (ENSMMMG00000009037)
Alpin marmot	MODERN SPECIES	84						ENSMMMG00000007885	SLC35A3 (ENSMMMG00000007910)	MFSD14A (ENSMMMG00000007927)	SASS6 (ENSMMMG00000007946)	TRMT13 (ENSMMMG00000008087)	LRRC39 (ENSMMMG00000008107)	DBT (ENSMMMG00000008128)	RTCA (ENSMMMG00000008151) #19	ENSMMMG00000008166	CDC14A (ENSMMMG00000008178) #20	ENSMMMG00000008224 #22	ENSMMMG00000008239 #22	EXTL2 (ENSMMMG00000008252) #23	SLC30A7 (ENSMMMG00000008265) #24	DPH5 (ENSMMMG00000008290) #25	S1PR1 (ENSMMMG00000008298) #27	OLFM3 (ENSMMMG00000008315) #28	COL11A1 (ENSMMMG00000008346) #29	ENSMMMG00000008459	ENSMMMG00000008465	RNPC3 (ENSMMMG00000008477) #30	ENSMMMG00000008515 #33	ENSMMMG00000008564 #31	PRMT6 (ENSMMMG00000008646)	NTNG1 (ENSMMMG00000008654) #35	VAV3 (ENSMMMG00000008992) #36
Marmotini_b	ANCESTRAL SPECIES	201						ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b.e.a #19	ENSGT00530000063718.a.a.f	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000154802 #31
Arctic ground squirrel	MODERN SPECIES	694																VCAM1 (ENSUPAG00010005566) #22	EXTL2 (ENSUPAG00010005586) #23	SLC30A7 (ENSUPAG00010005596) #24	DPH5 (ENSUPAG00010005613) #25	S1PR1 (ENSUPAG00010005626) #27
Squirrel	MODERN SPECIES	348						SLC35A3 (ENSSTOG00000013428)	MFSD14A (ENSSTOG00000013436)	SASS6 (ENSSTOG00000013454)	TRMT13 (ENSSTOG00000013483)	LRRC39 (ENSSTOG00000013494)	DBT (ENSSTOG00000013513)	ENSSTOG00000013528 #19	ENSSTOG00000022859	CDC14A (ENSSTOG00000027626) #20	GPR88 (ENSSTOG00000007825) #21	VCAM1 (ENSSTOG00000025796) #22	EXTL2 (ENSSTOG00000020111) #23	SLC30A7 (ENSSTOG00000005363) #24	DPH5 (ENSSTOG00000005381) #25	S1PR1 (ENSSTOG00000026871) #27	ENSSTOG00000033534	OLFM3 (ENSSTOG00000015881) #28
Eurasian red squirrel	MODERN SPECIES		ENSSVLG00005001951	ENSSVLG00005001963	ENSSVLG00005001980	ENSSVLG00005001992	ENSSVLG00005002007	ENSSVLG00005002022	SLC35A3 (ENSSVLG00005002070)	MFSD14A (ENSSVLG00005002135)	SASS6 (ENSSVLG00005002169)	ENSSVLG00005002230	LRRC39 (ENSSVLG00005002266)	DBT (ENSSVLG00005002296)	RTCA (ENSSVLG00005002327) #19	CDC14A (ENSSVLG00005002393) #20	GPR88 (ENSSVLG00005002478) #21	VCAM1 (ENSSVLG00005002518) #22	EXTL2 (ENSSVLG00005002604) #23	DPH5 (ENSSVLG00005002641) #25	S1PR1 (ENSSVLG00005002655) #27	OLFM3 (ENSSVLG00005002683) #28	COL11A1 (ENSSVLG00005002837) #29	RNPC3 (ENSSVLG00005002988) #30	ENSSVLG00005003018 #31	ENSSVLG00005003048	ENSSVLG00005003059	ENSSVLG00005003076	ENSSVLG00005003089	ENSSVLG00005003098	ENSSVLG00005003112	ENSSVLG00005003128	PRMT6 (ENSSVLG00005003149)
Hystricomorpha	ANCESTRAL SPECIES	23	ENSGT00940000155315	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000154802 #31	ENSGT00940000160961	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37	ENSGT00940000156132	ENSGT00390000004798
Hystricomorpha_a	ANCESTRAL SPECIES	14	ENSGT00940000155315	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000154802 #31	ENSGT00940000160961	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37	ENSGT00940000156132	ENSGT00390000004798
Hystricomorpha_b	ANCESTRAL SPECIES	6	ENSGT00940000155315	ENSGT00940000158610	ENSGT00940000156181.B	ENSGT00940000157718	ENSGT00940000157704	ENSGT00390000012596	ENSGT00950000182827.C	ENSGT00940000157395	ENSGT00390000006932	ENSGT00390000003182	ENSGT00940000158998	ENSGT00940000156750	ENSGT00530000063404.b #19	ENSGT00940000155899 #20	ENSGT00390000009609 #21	ENSGT00940000156511 #22	ENSGT00940000158820 #23	ENSGT00940000159571 #24	ENSGT00390000010568 #25	ENSGT01050000244887.A.a.b #27	ENSGT00940000156998 #28	ENSGT00940000154535.D #29	ENSGT00530000063786.a #30	ENSGT00940000163518	ENSGT00940000163532 #33	ENSGT00940000160961	ENSGT00940000153601.a.b #35	ENSGT00940000155252 #36	ENSGT00940000158786	ENSGT00940000164117 #37	ENSGT00940000156132
Long-tailed chinchilla	MODERN SPECIES	142	ENSCLAG00000004609	SNX7 (ENSCLAG00000005256)	PLPPR5 (ENSCLAG00000005411)	PLPPR4 (ENSCLAG00000005614)	PALMD (ENSCLAG00000004333)	FRRS1 (ENSCLAG00000005704)	AGL (ENSCLAG00000006779)	SLC35A3 (ENSCLAG00000007132)	MFSD14A (ENSCLAG00000005104)	SASS6 (ENSCLAG00000006884)	TRMT13 (ENSCLAG00000008220)	LRRC39 (ENSCLAG00000010756)	DBT (ENSCLAG00000013220)	RTCA (ENSCLAG00000006125) #19	CDC14A (ENSCLAG00000006592) #20	VCAM1 (ENSCLAG00000007563) #22	EXTL2 (ENSCLAG00000004454) #23	SLC30A7 (ENSCLAG00000004866) #24	DPH5 (ENSCLAG00000006002) #25	S1PR1 (ENSCLAG00000017667) #27	OLFM3 (ENSCLAG00000011343) #28	COL11A1 (ENSCLAG00000008804) #29	RNPC3 (ENSCLAG00000005169) #30	ENSCLAG00000005447 #31	ENSCLAG00000005982 #31	PRMT6 (ENSCLAG00000017949)	NTNG1 (ENSCLAG00000011116) #35	VAV3 (ENSCLAG00000011456) #36	SLC25A24 (ENSCLAG00000004369)	ENSCLAG00000004666 #37	ENSCLAG00000005273
Guinea pig	MODERN SPECIES	2	DPYD (ENSCPOG00000003769)	SNX7 (ENSCPOG00000012454)	PLPPR5 (ENSCPOG00000002369)	PLPPR4 (ENSCPOG00000006308)	PALMD (ENSCPOG00000020596)	FRRS1 (ENSCPOG00000004910)	AGL (ENSCPOG00000011683)	SLC35A3 (ENSCPOG00000009156)	MFSD14A (ENSCPOG00000000691)	SASS6 (ENSCPOG00000000693)	TRMT13 (ENSCPOG00000000694)	LRRC39 (ENSCPOG00000000696)	DBT (ENSCPOG00000006774)	ENSCPOG00000009296 #19	CDC14A (ENSCPOG00000013851) #20	VCAM1 (ENSCPOG00000006727) #22	EXTL2 (ENSCPOG00000030009) #23	SLC30A7 (ENSCPOG00000007627) #24	DPH5 (ENSCPOG00000007633) #25	S1PR1 (ENSCPOG00000040695) #27	OLFM3 (ENSCPOG00000011871) #28	COL11A1 (ENSCPOG00000012629) #29	RNPC3 (ENSCPOG00000031638) #30	ENSCPOG00000002763 #31	PRMT6 (ENSCPOG00000030946)	NTNG1 (ENSCPOG00000014518) #35	VAV3 (ENSCPOG00000000677) #36	SLC25A24 (ENSCPOG00000000991)	ENSCPOG00000031813 #37	EEIG2 (ENSCPOG00000039855)	HENMT1 (ENSCPOG00000004564)
Naked mole-rat female	MODERN SPECIES	10	MFSD14A (ENSHGLG00000002043)	ENSHGLG00000032669	SLC35A3 (ENSHGLG00000001999)	AGL (ENSHGLG00000001869)	ENSHGLG00000043942	FRRS1 (ENSHGLG00000038575)	PALMD (ENSHGLG00000043255)	ENSHGLG00000046587	PLPPR4 (ENSHGLG00000001471)	ENSHGLG00000001402	ENSHGLG00000001250	ENSHGLG00000001141	ENSHGLG00000041024	ENSHGLG00000032170	ENSHGLG00000041802	ENSHGLG00000001392 #22	EXTL2 (ENSHGLG00000047823) #23	SLC30A7 (ENSHGLG00000001503) #24	DPH5 (ENSHGLG00000001639) #25	ENSHGLG00000037805	S1PR1 (ENSHGLG00000035961) #27	OLFM3 (ENSHGLG00000036982) #28	ENSHGLG00000000829 #29	ENSHGLG00000001660	ENSHGLG00000037669	ENSHGLG00000001708 #30	ENSHGLG00000043012 #31	ENSHGLG00000001774 #33	ENSHGLG00000000096 #33	ENSHGLG00000048203	ENSHGLG00000035781