Murinae	ANCESTRAL SPECIES	21	ENSGT00530000063860.a #8	ENSGT00940000155437 #9	ENSGT00950000183227	ENSGT01060000248588.a.c.a #10	ENSGT00940000158371 #11	ENSGT00940000157891 #12	ENSGT00940000154808.a.b #13	ENSGT00390000003364 #14	ENSGT00940000156437 #15	ENSGT00390000008742 #16	ENSGT00940000157487 #17	ENSGT00390000002374 #18	ENSGT00940000153434.a.a ##19	ENSGT00940000161055 #20	ENSGT00390000016025.a #21	ENSGT00940000155181 #22	ENSGT00940000157707 #23	ENSGT00390000002445 #24	ENSGT00530000063675.b #25	ENSGT00940000164141 #26	ENSGT00950000183043.a.b.b.a.b.u.a.b.b #27	ENSGT00950000183043.a.b.b.a.b.u.a.b.a #28	ENSGT00950000183043.a.b.b.a.b.u.b #29	ENSGT00950000183043.a.b.b.a.a.a.b #30	ENSGT00490000043385 #31	ENSGT00940000156859 #32	ENSGT00390000001195.a #33	ENSGT00940000153424.a.b #35	ENSGT00940000153321.b.b.l.b.a.a.a.b #36	ENSGT00940000153321.b.b.l.b.a.a.a.a #37	ENSGT00940000153321.b.b.l.b.a.b ##37
Mus	ANCESTRAL SPECIES	18	ENSGT00530000063860.a #8	ENSGT00940000155437 #9	ENSGT00950000183227	ENSGT01060000248588.a.c.a #10	ENSGT00940000158371 #11	ENSGT00940000157891 #12	ENSGT00940000154808.a.b #13	ENSGT00390000003364 #14	ENSGT00940000156437 #15	ENSGT00390000008742 #16	ENSGT00940000157487 #17	ENSGT00390000002374 #18	ENSGT00940000153434.a.a ##19	ENSGT00940000161055 #20	ENSGT00390000016025.a #21	ENSGT00940000155181 #22	ENSGT00940000157707 #23	ENSGT00390000002445 #24	ENSGT00530000063675.b #25	ENSGT00940000164141 #26	ENSGT00950000183043.a.b.b.a.b.u.a.b.b #27	ENSGT00950000183043.a.b.b.a.b.u.a.b.a #28	ENSGT00950000183043.a.b.b.a.b.u.b #29	ENSGT00950000183043.a.b.b.a.a.a.b #30	ENSGT00490000043385 #31	ENSGT00940000156859 #32	ENSGT00390000001195.a #33	ENSGT00800000125290 #34	ENSGT00940000153424.a.b #35	ENSGT00940000153321.b.b.l.b.a.a.a.b #36	ENSGT00940000153321.b.b.l.b.a.a.a.a #37
Mus_A	ANCESTRAL SPECIES	14	ENSGT00530000063860.a #8	ENSGT00940000155437 #9	ENSGT00950000183227	ENSGT01060000248588.a.c.a #10	ENSGT00940000158371 #11	ENSGT00940000157891 #12	ENSGT00940000154808.a.b #13	ENSGT00390000003364 #14	ENSGT00940000156437 #15	ENSGT00390000008742 #16	ENSGT00940000157487 #17	ENSGT00390000002374 #18	ENSGT00940000153434.a.a ##19	ENSGT00940000161055 #20	ENSGT00390000016025.a #21	ENSGT00940000155181 #22	ENSGT00940000157707 #23	ENSGT00390000002445 #24	ENSGT00530000063675.b #25	ENSGT00940000164141 #26	ENSGT00950000183043.a.b.b.a.b.u.a.b.b #27	ENSGT00950000183043.a.b.b.a.b.u.a.b.a #28	ENSGT00950000183043.a.b.b.a.b.u.b #29	ENSGT00950000183043.a.b.b.a.a.a.b #30	ENSGT00490000043385 #31	ENSGT00940000156859 #32	ENSGT00390000001195.a #33	ENSGT00800000125290 #34	ENSGT00940000153424.a.b #35	ENSGT00940000153321.b.b.l.b.a.a.a.b #36	ENSGT00940000153321.b.b.l.b.a.a.a.a #37
Ryukyu mouse	MODERN SPECIES	4	Lect2 (MGP_CAROLIEiJ_G0018587) #7	Tgfbi (MGP_CAROLIEiJ_G0018588) #8	Smad5 (MGP_CAROLIEiJ_G0018589) #9	Trpc7 (MGP_CAROLIEiJ_G0018590) #10	Spock1 (MGP_CAROLIEiJ_G0018591) #11	Klhl3 (MGP_CAROLIEiJ_G0018592) #12	Hnrnpa0 (MGP_CAROLIEiJ_G0018593) #13	Idnk (MGP_CAROLIEiJ_G0018594) #14	Ubqln1 (MGP_CAROLIEiJ_G0018595) #15	Gkap1 (MGP_CAROLIEiJ_G0018596) #16	Kif27 (MGP_CAROLIEiJ_G0018597) #17	2210016F16Rik (MGP_CAROLIEiJ_G0018598) #18	MGP_CAROLIEiJ_G0018599 #19	Rmi1 (MGP_CAROLIEiJ_G0018600) #20	Slc28a3 (MGP_CAROLIEiJ_G0018601) #21	Ntrk2 (MGP_CAROLIEiJ_G0018602) #22	Agtpbp1 (MGP_CAROLIEiJ_G0018603) #23	MGP_CAROLIEiJ_G0018604 #24	Golm1 (MGP_CAROLIEiJ_G0018605) #25	4921517D22Rik (MGP_CAROLIEiJ_G0018606) #26	MGP_CAROLIEiJ_G0018607 #27	MGP_CAROLIEiJ_G0018608 #28	Spata31d1d (MGP_CAROLIEiJ_G0018609) #29	1700014D04Rik (MGP_CAROLIEiJ_G0018610) #30	MGP_CAROLIEiJ_G0018611 #31	Tut7 (MGP_CAROLIEiJ_G0018612) #32	Gas1 (MGP_CAROLIEiJ_G0018613) #33	MGP_CAROLIEiJ_G0018614 #34	Dapk1 (MGP_CAROLIEiJ_G0018615) #35	BC051665 (MGP_CAROLIEiJ_G0018616) #36	Ctsll3 (MGP_CAROLIEiJ_G0018617) #37
Mus_B	ANCESTRAL SPECIES	13	ENSGT00530000063860.a #8	ENSGT00940000155437 #9	ENSGT00950000183227	ENSGT01060000248588.a.c.a #10	ENSGT00940000158371 #11	ENSGT00940000157891 #12	ENSGT00940000154808.a.b #13	ENSGT00390000003364 #14	ENSGT00940000156437 #15	ENSGT00390000008742 #16	ENSGT00940000157487 #17	ENSGT00390000002374 #18	ENSGT00940000153434.a.a ##19	ENSGT00940000161055 #20	ENSGT00390000016025.a #21	ENSGT00940000155181 #22	ENSGT00940000157707 #23	ENSGT00390000002445 #24	ENSGT00530000063675.b #25	ENSGT00940000164141 #26	ENSGT00950000183043.a.b.b.a.b.u.a.b.b #27	ENSGT00950000183043.a.b.b.a.b.u.a.b.a #28	ENSGT00950000183043.a.b.b.a.b.u.b #29	ENSGT00950000183043.a.b.b.a.a.a.b #30	ENSGT00490000043385 #31	ENSGT00940000156859 #32	ENSGT00390000001195.a #33	ENSGT00800000125290 #34	ENSGT00940000153424.a.b #35	ENSGT00940000153321.b.b.l.b.a.a.a.b #36	ENSGT00940000153321.b.b.l.b.a.a.a.a #37
Mouse	MODERN SPECIES	4	Tgfbi (ENSMUSG00000035493) #8	Smad5 (ENSMUSG00000021540) #9	Smim32 (ENSMUSG00000110086)	Trpc7 (ENSMUSG00000021541) #10	Spock1 (ENSMUSG00000056222) #11	Klhl3 (ENSMUSG00000014164) #12	Hnrnpa0 (ENSMUSG00000007836) #13	Idnk (ENSMUSG00000050002) #14	Ubqln1 (ENSMUSG00000005312) #15	Gkap1 (ENSMUSG00000021552) #16	Kif27 (ENSMUSG00000060176) #17	2210016F16Rik (ENSMUSG00000021550) #18	Hnrnpk (ENSMUSG00000021546) ##19	Rmi1 (ENSMUSG00000035367) #20	Slc28a3 (ENSMUSG00000021553) #21	Ntrk2 (ENSMUSG00000055254) #22	Agtpbp1 (ENSMUSG00000021557) #23	Naa35 (ENSMUSG00000021555) #24	Golm1 (ENSMUSG00000021556) #25	4921517D22Rik (ENSMUSG00000049902) #26	Spata31d1a (ENSMUSG00000050876) #27	Spata31d1b (ENSMUSG00000091311) #28	Spata31d1d (ENSMUSG00000043986) #29	1700014D04Rik (ENSMUSG00000051054) #30	Isca1 (ENSMUSG00000044792) #31	Tut7 (ENSMUSG00000035248) #32	Gas1 (ENSMUSG00000052957) #33	Dapk1 (ENSMUSG00000021559) #35	BC051665 (ENSMUSG00000042243) #36	Ctsll3 (ENSMUSG00000056728) #37	4930486L24Rik (ENSMUSG00000050345) ##37
Mus_C	ANCESTRAL SPECIES	10	ENSGT00530000063860.a #8	ENSGT00940000155437 #9	ENSGT00950000183227	ENSGT01060000248588.a.c.a #10	ENSGT00940000158371 #11	ENSGT00940000157891 #12	ENSGT00940000154808.a.b #13	ENSGT00390000003364 #14	ENSGT00940000156437 #15	ENSGT00390000008742 #16	ENSGT00940000157487 #17	ENSGT00390000002374 #18	ENSGT00940000153434.a.a ##19	ENSGT00940000161055 #20	ENSGT00390000016025.a #21	ENSGT00940000155181 #22	ENSGT00940000157707 #23	ENSGT00390000002445 #24	ENSGT00530000063675.b #25	ENSGT00940000164141 #26	ENSGT00950000183043.a.b.b.a.b.u.a.b.b #27	ENSGT00950000183043.a.b.b.a.b.u.a.b.a #28	ENSGT00950000183043.a.b.b.a.b.u.b #29	ENSGT00950000183043.a.b.b.a.a.a.b #30	ENSGT00490000043385 #31	ENSGT00940000156859 #32	ENSGT00390000001195.a #33	ENSGT00800000125290 #34	ENSGT00940000153424.a.b #35	ENSGT00940000153321.b.b.l.b.a.a.a.b #36	ENSGT00940000153321.b.b.l.b.a.a.a.a #37
spretus	MODERN SPECIES	4	Lect2 (MGP_SPRETEiJ_G0019467) #7	Tgfbi (MGP_SPRETEiJ_G0019468) #8	Smad5 (MGP_SPRETEiJ_G0019469) #9	Trpc7 (MGP_SPRETEiJ_G0019470) #10	Spock1 (MGP_SPRETEiJ_G0019471) #11	Klhl3 (MGP_SPRETEiJ_G0019472) #12	Hnrnpa0 (MGP_SPRETEiJ_G0019473) #13	Idnk (MGP_SPRETEiJ_G0019474) #14	Ubqln1 (MGP_SPRETEiJ_G0019475) #15	Gkap1 (MGP_SPRETEiJ_G0019476) #16	Kif27 (MGP_SPRETEiJ_G0019477) #17	2210016F16Rik (MGP_SPRETEiJ_G0019478) #18	Hnrnpk (MGP_SPRETEiJ_G0019479) ##19	Rmi1 (MGP_SPRETEiJ_G0019480) #20	Slc28a3 (MGP_SPRETEiJ_G0019481) #21	Ntrk2 (MGP_SPRETEiJ_G0019482) #22	Agtpbp1 (MGP_SPRETEiJ_G0019483) #23	Naa35 (MGP_SPRETEiJ_G0019484) #24	MGP_SPRETEiJ_G0019485 #25	4921517D22Rik (MGP_SPRETEiJ_G0019486) #26	Spata31d1a (MGP_SPRETEiJ_G0019487) #27	Spata31d1d (MGP_SPRETEiJ_G0019488) #29	1700014D04Rik (MGP_SPRETEiJ_G0019489) #30	MGP_SPRETEiJ_G0019490 #31	Tut7 (MGP_SPRETEiJ_G0019491) #32	Gas1 (MGP_SPRETEiJ_G0019492) #33	MGP_SPRETEiJ_G0019493 #34	Dapk1 (MGP_SPRETEiJ_G0019494) #35	BC051665 (MGP_SPRETEiJ_G0019495) #36	Ctsll3 (MGP_SPRETEiJ_G0019496) #37	4930486L24Rik (MGP_SPRETEiJ_G0019497) ##37
Steppe mouse	MODERN SPECIES	3363	Smad5 (ENSMSIG00000019822) #9	Smim32 (ENSMSIG00000019832)	Trpc7 (ENSMSIG00000019854) #10	ENSMSIG00000019959 #11	ENSMSIG00000020017 #11	Klhl3 (ENSMSIG00000020033) #12	Idnk (ENSMSIG00000020108) #14	Ubqln1 (ENSMSIG00000020154) #15	Gkap1 (ENSMSIG00000020227) #16	Kif27 (ENSMSIG00000020244) #17	2210016F16Rik (ENSMSIG00000020343) #18	Hnrnpk (ENSMSIG00000020356) ##19	Rmi1 (ENSMSIG00000020651) #20	Slc28a3 (ENSMSIG00000020681) #21	ENSMSIG00000020732	Ntrk2 (ENSMSIG00000020750) #22	Agtpbp1 (ENSMSIG00000021104) #23	Naa35 (ENSMSIG00000021291) #24	Golm1 (ENSMSIG00000021316) #25	4921517D22Rik (ENSMSIG00000021349) #26	Spata31d1a (ENSMSIG00000021365) #27	Spata31d1b (ENSMSIG00000021379) #28	Spata31d1d (ENSMSIG00000021387) #29	1700014D04Rik (ENSMSIG00000021396) #30	ENSMSIG00000021410 #31	Tut7 (ENSMSIG00000021435) #32	Gas1 (ENSMSIG00000021556) #33	ENSMSIG00000021571 #34	ENSMSIG00000021574	Dapk1 (ENSMSIG00000021579) #35	BC051665 (ENSMSIG00000021609) #36
Shrew mouse	MODERN SPECIES	7	Lect2 (MGP_PahariEiJ_G0019651) #7	Tgfbi (MGP_PahariEiJ_G0019652) #8	Smad5 (MGP_PahariEiJ_G0019653) #9	Trpc7 (MGP_PahariEiJ_G0019654) #10	Spock1 (MGP_PahariEiJ_G0019655) #11	Klhl3 (MGP_PahariEiJ_G0019656) #12	Hnrnpa0 (MGP_PahariEiJ_G0019657) #13	Idnk (MGP_PahariEiJ_G0019658) #14	Ubqln1 (MGP_PahariEiJ_G0019659) #15	Gkap1 (MGP_PahariEiJ_G0019660) #16	Kif27 (MGP_PahariEiJ_G0019661) #17	2210016F16Rik (MGP_PahariEiJ_G0019662) #18	Hnrnpk (MGP_PahariEiJ_G0019663) ##19	Rmi1 (MGP_PahariEiJ_G0019664) #20	Slc28a3 (MGP_PahariEiJ_G0019665) #21	Ntrk2 (MGP_PahariEiJ_G0019666) #22	Agtpbp1 (MGP_PahariEiJ_G0019667) #23	Naa35 (MGP_PahariEiJ_G0019668) #24	Golm1 (MGP_PahariEiJ_G0019669) #25	4921517D22Rik (MGP_PahariEiJ_G0019670) #26	MGP_PahariEiJ_G0019671 #27	Spata31d1b (MGP_PahariEiJ_G0019672) #28	Spata31d1d (MGP_PahariEiJ_G0019673) #29	1700014D04Rik (MGP_PahariEiJ_G0019674) #30	MGP_PahariEiJ_G0019675 #31	Tut7 (MGP_PahariEiJ_G0019676) #32	Gas1 (MGP_PahariEiJ_G0019677) #33	MGP_PahariEiJ_G0019678 #34	Dapk1 (MGP_PahariEiJ_G0019679) #35	BC051665 (MGP_PahariEiJ_G0019680) #36	Ctsll3 (MGP_PahariEiJ_G0019681) #37
Rat	MODERN SPECIES	8	Lect2 (ENSRNOG00000012189) #7	Tgfbi (ENSRNOG00000012216) #8	Smad5 (ENSRNOG00000022870) #9	Trpc7 (ENSRNOG00000012727) #10	Spock1 (ENSRNOG00000012747) #11	Klhl3 (ENSRNOG00000019533) #12	Hnrnpa0 (ENSRNOG00000039876) #13	Idnk (ENSRNOG00000019519) #14	Ubqln1 (ENSRNOG00000019282) #15	Gkap1 (ENSRNOG00000019272) #16	Kif27 (ENSRNOG00000019257) #17	RGD1311345 (ENSRNOG00000019232) #18	Hnrnpk (ENSRNOG00000019113) ##19	Rmi1 (ENSRNOG00000019108) #20	Slc28a3 (ENSRNOG00000018853) #21	Ntrk2 (ENSRNOG00000018839) #22	Agtpbp1 (ENSRNOG00000018651) #23	ENSRNOG00000064986	Naa35 (ENSRNOG00000018417) #24	Golm1 (ENSRNOG00000018400) #25	LOC100912252 (ENSRNOG00000042206) #26	Spata31d3 (ENSRNOG00000056413) #27	Spata31d1b (ENSRNOG00000069288) #28	Spata31d1 (ENSRNOG00000027014) #29	AABR07026929.1 (ENSRNOG00000042026) #30	Isca1 (ENSRNOG00000018343) #31	Tut7 (ENSRNOG00000016629) #32	Dapk1 (ENSRNOG00000018198) #35	RGD1308751 (ENSRNOG00000039954) #36	Ctsll3 (ENSRNOG00000069877) #37	Testin (ENSRNOG00000018028) ##37