Eutheria ANCESTRAL SPECIES 3 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT01100000263709 Boreoeutheria ANCESTRAL SPECIES 1 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00940000154175.j ##9 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000162428.b ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 Euarchontoglires ANCESTRAL SPECIES 1 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00940000154175.j ##9 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000162428.b ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 ENSGT00940000159782 Primates ANCESTRAL SPECIES ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 Haplorrhini ANCESTRAL SPECIES ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 ENSGT00940000159782 Simiiformes ANCESTRAL SPECIES ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##28 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 Catarrhini ANCESTRAL SPECIES 1 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##28 ENSGT00940000159114.a.a #29 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000004524.c.a.a.a.a.a.a #37 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##28 ENSGT00940000159114.a.a #29 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000004524.c.a.a.a.a.a.a #37 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #29 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000004524.c.a.a.a.a.a.a #37 ENSGT00940000155627 Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #29 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00910000147733 #31 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000004524.c.a.a.a.a.a.a #37 Macaca ANCESTRAL SPECIES 2 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #29 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00910000147733 #31 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000004524.c.a.a.a.a.a.a #37 Pig-tailed macaque MODERN SPECIES 204 CFAP300 (ENSMNEG00000038673) #7 YAP1 (ENSMNEG00000032086) #8 BIRC3 (ENSMNEG00000040332) #9 BIRC2 (ENSMNEG00000038024) #10 TMEM123 (ENSMNEG00000040184) #11 MMP7 (ENSMNEG00000040439) #12 MMP20 (ENSMNEG00000020408) #13 MMP27 (ENSMNEG00000041633) #14 MMP8 (ENSMNEG00000031542) #15 MMP10 (ENSMNEG00000026876) #16 MMP1 (ENSMNEG00000034618) #17 MMP3 (ENSMNEG00000043414) #18 MMP12 (ENSMNEG00000040391) #19 MMP13 (ENSMNEG00000037655) #20 DCUN1D5 (ENSMNEG00000029266) #21 DYNC2H1 (ENSMNEG00000042907) #22 DDI1 (ENSMNEG00000023817) #23 PDGFD (ENSMNEG00000036191) #24 CASP12 (ENSMNEG00000032441) #25 CASP4 (ENSMNEG00000027443) #26 CASP5 (ENSMNEG00000035890) #27 CASP1 (ENSMNEG00000007166) #28 ENSMNEG00000045362 #29 CARD18 (ENSMNEG00000041604) #30 ENSMNEG00000034986 #31 GRIA4 (ENSMNEG00000039956) #32 MSANTD4 (ENSMNEG00000028862) #33 KBTBD3 (ENSMNEG00000041894) #34 AASDHPPT (ENSMNEG00000032892) #35 ENSMNEG00000036279 #36 ENSMNEG00000043288 #37 Macaca_a ANCESTRAL SPECIES 3 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #29 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 Rhesus MODERN SPECIES 5 YAP1 (ENSMMUG00000003396) #8 BIRC3 (ENSMMUG00000058594) #9 BIRC2 (ENSMMUG00000003400) #10 TMEM123 (ENSMMUG00000003403) #11 MMP7 (ENSMMUG00000003405) #12 MMP20 (ENSMMUG00000011013) #13 MMP27 (ENSMMUG00000011015) #14 ENSMMUG00000053278 MMP8 (ENSMMUG00000004489) #15 MMP10 (ENSMMUG00000021764) #16 MMP1 (ENSMMUG00000002037) #17 MMP3 (ENSMMUG00000004249) #18 MMP12 (ENSMMUG00000004250) #19 MMP13 (ENSMMUG00000004253) #20 DCUN1D5 (ENSMMUG00000007008) #21 DYNC2H1 (ENSMMUG00000018308) #22 PDGFD (ENSMMUG00000005353) #24 DDI1 (ENSMMUG00000042509) #23 CASP12 (ENSMMUG00000016548) #25 CASP4 (ENSMMUG00000009850) #26 CASP5 (ENSMMUG00000009851) #27 CASP1 (ENSMMUG00000009852) #28 ENSMMUG00000051672 ENSMMUG00000009854 #29 CARD18 (ENSMMUG00000021551) #30 ENSMMUG00000049289 GRIA4 (ENSMMUG00000010987) #32 MSANTD4 (ENSMMUG00000010988) #33 KBTBD3 (ENSMMUG00000010989) #34 AASDHPPT (ENSMMUG00000010990) #35 ENSMMUG00000062630 Crab-eating macaque MODERN SPECIES 5 YAP1 (ENSMFAG00000037027) #8 BIRC2 (ENSMFAG00000033018) #10 TMEM123 (ENSMFAG00000057826) #11 ENSMFAG00000056286 ENSMFAG00000060149 MMP7 (ENSMFAG00000037818) #12 MMP20 (ENSMFAG00000035397) #13 MMP27 (ENSMFAG00000043441) #14 MMP8 (ENSMFAG00000032735) #15 MMP10 (ENSMFAG00000031795) #16 MMP1 (ENSMFAG00000035922) #17 MMP3 (ENSMFAG00000037925) #18 MMP12 (ENSMFAG00000037971) #19 MMP13 (ENSMFAG00000001049) #20 DCUN1D5 (ENSMFAG00000033871) #21 DYNC2H1 (ENSMFAG00000039001) #22 PDGFD (ENSMFAG00000035368) #24 ENSMFAG00000058317 CASP12 (ENSMFAG00000019805) #25 CASP4 (ENSMFAG00000000204) #26 CASP5 (ENSMFAG00000063780) #27 CASP1 (ENSMFAG00000001158) #28 ENSMFAG00000043576 #29 ENSMFAG00000039181 #29 CARD18 (ENSMFAG00000037895) #30 GRIA4 (ENSMFAG00000001913) #32 MSANTD4 (ENSMFAG00000034061) #33 KBTBD3 (ENSMFAG00000031041) #34 AASDHPPT (ENSMFAG00000046243) #35 GUCY1A2 (ENSMFAG00000034683) #36 ENSMFAG00000054943 Cercopithecinae_b ANCESTRAL SPECIES 21 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #29 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00910000147733 #31 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000004524.c.a.a.a.a.a.a #37 Cercopithecinae_d ANCESTRAL SPECIES 45 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #29 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00910000147733 #31 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000004524.c.a.a.a.a.a.a #37 Sooty mangabey MODERN SPECIES 138 MMP7 (ENSCATG00000044241) #12 MMP20 (ENSCATG00000043912) #13 MMP27 (ENSCATG00000043668) #14 MMP8 (ENSCATG00000035287) #15 MMP10 (ENSCATG00000032332) #16 MMP1 (ENSCATG00000044122) #17 MMP3 (ENSCATG00000040255) #18 MMP12 (ENSCATG00000032347) #19 MMP13 (ENSCATG00000037318) #20 DCUN1D5 (ENSCATG00000045156) #21 ENSCATG00000045002 DYNC2H1 (ENSCATG00000022191) #22 DDI1 (ENSCATG00000016207) #23 PDGFD (ENSCATG00000032486) #24 CASP12 (ENSCATG00000032709) #25 CASP4 (ENSCATG00000034381) #26 CASP5 (ENSCATG00000033400) #27 ENSCATG00000034782 #29 CASP1 (ENSCATG00000031081) #28 CARD18 (ENSCATG00000044271) #30 ENSCATG00000040187 #31 GRIA4 (ENSCATG00000039166) #32 MSANTD4 (ENSCATG00000030475) #33 KBTBD3 (ENSCATG00000044798) #34 AASDHPPT (ENSCATG00000043976) #35 GUCY1A2 (ENSCATG00000037410) #36 ENSCATG00000022017 ##37 Drill MODERN SPECIES 895 BIRC3 (ENSMLEG00000041716) #9 BIRC2 (ENSMLEG00000035461) #10 ENSMLEG00000035112 TMEM123 (ENSMLEG00000034191) #11 MMP7 (ENSMLEG00000031118) #12 MMP20 (ENSMLEG00000030794) #13 MMP27 (ENSMLEG00000031462) #14 MMP8 (ENSMLEG00000042565) #15 MMP10 (ENSMLEG00000031529) #16 MMP1 (ENSMLEG00000041475) #17 ENSMLEG00000032101 MMP3 (ENSMLEG00000043132) #18 MMP12 (ENSMLEG00000031646) #19 MMP13 (ENSMLEG00000033536) #20 DCUN1D5 (ENSMLEG00000043262) #21 DYNC2H1 (ENSMLEG00000038133) #22 PDGFD (ENSMLEG00000028545) #24 Olive baboon MODERN SPECIES 3 ENSPANG00000047316 YAP1 (ENSPANG00000007466) #8 BIRC3 (ENSPANG00000018870) #9 TMEM123 (ENSPANG00000014629) #11 MMP7 (ENSPANG00000012249) #12 MMP20 (ENSPANG00000003601) #13 MMP27 (ENSPANG00000032087) #14 MMP8 (ENSPANG00000019175) #15 MMP10 (ENSPANG00000007953) #16 MMP1 (ENSPANG00000018869) #17 MMP3 (ENSPANG00000014348) #18 MMP12 (ENSPANG00000018407) #19 MMP13 (ENSPANG00000016548) #20 ENSPANG00000041736 DCUN1D5 (ENSPANG00000007860) #21 DYNC2H1 (ENSPANG00000023174) #22 PDGFD (ENSPANG00000017124) #24 ENSPANG00000047317 CASP12 (ENSPANG00000003600) #25 CASP5 (ENSPANG00000022854) #27 CASP1 (ENSPANG00000007465) #28 ENSPANG00000046546 #29 ENSPANG00000032384 #29 ENSPANG00000003972 #29 CARD18 (ENSPANG00000041528) #30 ENSPANG00000040645 ENSPANG00000034834 GRIA4 (ENSPANG00000003734) #32 MSANTD4 (ENSPANG00000017474) #33 KBTBD3 (ENSPANG00000014883) #34 AASDHPPT (ENSPANG00000019124) #35 Vervet Monkey MODERN SPECIES CFAP300 (ENSCSAG00000003227) #7 YAP1 (ENSCSAG00000003224) #8 BIRC3 (ENSCSAG00000003222) #9 TMEM123 (ENSCSAG00000003220) #11 MMP7 (ENSCSAG00000003219) #12 MMP20 (ENSCSAG00000003216) #13 ENSCSAG00000000605 MMP27 (ENSCSAG00000003213) #14 MMP8 (ENSCSAG00000003209) #15 MMP10 (ENSCSAG00000003203) #16 MMP1 (ENSCSAG00000003198) #17 MMP3 (ENSCSAG00000003190) #18 MMP12 (ENSCSAG00000003188) #19 MMP13 (ENSCSAG00000003185) #20 DCUN1D5 (ENSCSAG00000003173) #21 DYNC2H1 (ENSCSAG00000003153) #22 PDGFD (ENSCSAG00000003085) #24 DDI1 (ENSCSAG00000000604) #23 CASP12 (ENSCSAG00000003084) #25 CASP4 (ENSCSAG00000003080) #26 CASP5 (ENSCSAG00000003077) #27 ENSCSAG00000003073 #28 ENSCSAG00000003066 #28 ENSCSAG00000003063 #29 CARD18 (ENSCSAG00000000603) #30 GRIA4 (ENSCSAG00000003058) #32 MSANTD4 (ENSCSAG00000003048) #33 KBTBD3 (ENSCSAG00000003044) #34 AASDHPPT (ENSCSAG00000003042) #35 ENSCSAG00000000602 GUCY1A2 (ENSCSAG00000003037) #36 Rhinopithecus ANCESTRAL SPECIES 347 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 Golden snub-nosed monkey MODERN SPECIES 2119 CFAP300 (ENSRROG00000030852) #7 YAP1 (ENSRROG00000033903) #8 BIRC3 (ENSRROG00000039472) #9 BIRC2 (ENSRROG00000039789) #10 TMEM123 (ENSRROG00000035161) #11 MMP7 (ENSRROG00000044514) #12 MMP20 (ENSRROG00000038564) #13 MMP27 (ENSRROG00000008615) #14 MMP8 (ENSRROG00000037624) #15 MMP10 (ENSRROG00000042454) #16 MMP1 (ENSRROG00000030668) #17 MMP3 (ENSRROG00000043417) #18 MMP12 (ENSRROG00000033367) #19 MMP13 (ENSRROG00000042337) #20 DCUN1D5 (ENSRROG00000033290) #21 DYNC2H1 (ENSRROG00000029529) #22 Black snub-nosed monkey MODERN SPECIES 1497 CFAP300 (ENSRBIG00000043051) #7 YAP1 (ENSRBIG00000036436) #8 BIRC3 (ENSRBIG00000017780) #9 BIRC2 (ENSRBIG00000029682) #10 TMEM123 (ENSRBIG00000002017) #11 MMP7 (ENSRBIG00000036156) #12 MMP20 (ENSRBIG00000033578) #13 MMP27 (ENSRBIG00000039707) #14 MMP8 (ENSRBIG00000036384) #15 MMP10 (ENSRBIG00000027869) #16 MMP1 (ENSRBIG00000028827) #17 MMP3 (ENSRBIG00000018235) #18 MMP12 (ENSRBIG00000032255) #19 MMP13 (ENSRBIG00000038724) #20 DCUN1D5 (ENSRBIG00000038043) #21 DYNC2H1 (ENSRBIG00000039808) #22 Hominoidea ANCESTRAL SPECIES 1 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##28 ENSGT00940000159114.a.a #29 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000004524.c.a.a.a.a.a.a #37 Hominidae ANCESTRAL SPECIES 1 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #29 ENSGT00940000159114.a.b ##28 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000004524.c.a.a.a.a.a.a #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 8 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##28 ENSGT00940000164349 #30 ENSGT00940000159114.a.a #29 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000004524.c.a.a.a.a.a.a #37 Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##28 ENSGT00940000164349 #30 ENSGT00940000159114.a.a #29 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000004524.c.a.a.a.a.a.a #37 Pan ANCESTRAL SPECIES 1 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##28 ENSGT00940000159114.a.a #29 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000004524.c.a.a.a.a.a.a #37 ENSGT00940000155627 Chimpanzee MODERN SPECIES 2 YAP1 (ENSPTRG00000004211) #8 BIRC3 (ENSPTRG00000004212) #9 BIRC2 (ENSPTRG00000004213) #10 TMEM123 (ENSPTRG00000022738) #11 MMP7 (ENSPTRG00000004215) #12 MMP20 (ENSPTRG00000004216) #13 MMP27 (ENSPTRG00000004217) #14 MMP8 (ENSPTRG00000004218) #15 MMP10 (ENSPTRG00000004219) #16 MMP1 (ENSPTRG00000023318) #17 ENSPTRG00000043621 MMP3 (ENSPTRG00000004220) #18 MMP12 (ENSPTRG00000048755) #19 MMP13 (ENSPTRG00000004222) #20 DCUN1D5 (ENSPTRG00000004223) #21 DYNC2H1 (ENSPTRG00000004224) #22 PDGFD (ENSPTRG00000004227) #24 CASP12 (ENSPTRG00000028413) #25 CASP4 (ENSPTRG00000023646) #26 CASP5 (ENSPTRG00000004230) #27 CASP1 (ENSPTRG00000048268) #28 ENSPTRG00000052161 ##28 ENSPTRG00000004231 #29 GRIA4 (ENSPTRG00000004233) #32 MSANTD4 (ENSPTRG00000004234) #33 KBTBD3 (ENSPTRG00000004235) #34 AASDHPPT (ENSPTRG00000004236) #35 GUCY1A2 (ENSPTRG00000004238) #36 ENSPTRG00000045119 #37 CWF19L2 (ENSPTRG00000004239) ENSPTRG00000047347 Bonobo MODERN SPECIES 2 YAP1 (ENSPPAG00000042951) #8 BIRC3 (ENSPPAG00000029649) #9 BIRC2 (ENSPPAG00000004061) #10 TMEM123 (ENSPPAG00000040642) #11 MMP7 (ENSPPAG00000033482) #12 MMP20 (ENSPPAG00000007692) #13 MMP27 (ENSPPAG00000030100) #14 MMP8 (ENSPPAG00000029244) #15 MMP10 (ENSPPAG00000019189) #16 MMP1 (ENSPPAG00000040747) #17 ENSPPAG00000031769 MMP3 (ENSPPAG00000036174) #18 MMP12 (ENSPPAG00000007778) #19 MMP13 (ENSPPAG00000028323) #20 DCUN1D5 (ENSPPAG00000030025) #21 DYNC2H1 (ENSPPAG00000040117) #22 PDGFD (ENSPPAG00000033732) #24 DDI1 (ENSPPAG00000020620) #23 CASP12 (ENSPPAG00000039543) #25 CASP4 (ENSPPAG00000042390) #26 CASP1 (ENSPPAG00000030163) #28 CARD16 (ENSPPAG00000042935) ##28 ENSPPAG00000035963 #29 GRIA4 (ENSPPAG00000026718) #32 MSANTD4 (ENSPPAG00000043080) #33 KBTBD3 (ENSPPAG00000043957) #34 AASDHPPT (ENSPPAG00000030173) #35 ENSPPAG00000043185 #36 ENSPPAG00000037738 #37 CWF19L2 (ENSPPAG00000023443) ENSPPAG00000042965 Human MODERN SPECIES 2 CFAP300 (ENSG00000137691) #7 YAP1 (ENSG00000137693) #8 BIRC3 (ENSG00000023445) #9 BIRC2 (ENSG00000110330) #10 TMEM123 (ENSG00000152558) #11 MMP7 (ENSG00000137673) #12 MMP20 (ENSG00000137674) #13 MMP27 (ENSG00000137675) #14 MMP8 (ENSG00000118113) #15 MMP10 (ENSG00000166670) #16 MMP1 (ENSG00000196611) #17 MMP3 (ENSG00000149968) #18 MMP12 (ENSG00000262406) #19 MMP13 (ENSG00000137745) #20 DCUN1D5 (ENSG00000137692) #21 DYNC2H1 (ENSG00000187240) #22 PDGFD (ENSG00000170962) #24 DDI1 (ENSG00000170967) #23 CASP12 (ENSG00000204403) #25 CASP4 (ENSG00000196954) #26 CASP5 (ENSG00000137757) #27 CASP1 (ENSG00000137752) #28 CARD16 (ENSG00000204397) ##28 CARD18 (ENSG00000255501) #30 GRIA4 (ENSG00000152578) #32 MSANTD4 (ENSG00000170903) #33 KBTBD3 (ENSG00000182359) #34 AASDHPPT (ENSG00000149313) #35 GUCY1A2 (ENSG00000152402) #36 CWF19L2 (ENSG00000152404) ALKBH8 (ENSG00000137760) Gorilla MODERN SPECIES 2 ENSGGOG00000005796 #8 BIRC3 (ENSGGOG00000005827) #9 BIRC2 (ENSGGOG00000008327) #10 TMEM123 (ENSGGOG00000008331) #11 ENSGGOG00000015908 #12 MMP20 (ENSGGOG00000003314) #13 MMP27 (ENSGGOG00000008717) #14 MMP8 (ENSGGOG00000008722) #15 MMP10 (ENSGGOG00000026738) #16 MMP1 (ENSGGOG00000008869) #17 ENSGGOG00000037629 MMP3 (ENSGGOG00000010315) #18 MMP12 (ENSGGOG00000015496) #19 MMP13 (ENSGGOG00000003490) #20 DCUN1D5 (ENSGGOG00000028011) #21 DYNC2H1 (ENSGGOG00000012522) #22 PDGFD (ENSGGOG00000002102) #24 DDI1 (ENSGGOG00000012736) #23 CASP12 (ENSGGOG00000012075) #25 CASP4 (ENSGGOG00000023145) #26 CASP5 (ENSGGOG00000015759) #27 CASP1 (ENSGGOG00000023820) #28 ENSGGOG00000002144 ##28 ENSGGOG00000038864 #29 CARD18 (ENSGGOG00000003113) #30 GRIA4 (ENSGGOG00000017011) #32 MSANTD4 (ENSGGOG00000009947) #33 KBTBD3 (ENSGGOG00000003966) #34 ENSGGOG00000039147 #35 GUCY1A2 (ENSGGOG00000009726) #36 ENSGGOG00000038540 #37 Orangutan MODERN SPECIES 2 YAP1 (ENSPPYG00000003806) #8 BIRC3 (ENSPPYG00000034604) #9 BIRC2 (ENSPPYG00000003808) #10 TMEM123 (ENSPPYG00000003809) #11 MMP7 (ENSPPYG00000003810) #12 MMP20 (ENSPPYG00000003811) #13 MMP27 (ENSPPYG00000037566) #14 MMP8 (ENSPPYG00000003812) #15 ENSPPYG00000033588 MMP10 (ENSPPYG00000032892) #16 MMP1 (ENSPPYG00000003813) #17 MMP3 (ENSPPYG00000003814) #18 MMP12 (ENSPPYG00000034070) #19 MMP13 (ENSPPYG00000003815) #20 DCUN1D5 (ENSPPYG00000003816) #21 DYNC2H1 (ENSPPYG00000003819) #22 PDGFD (ENSPPYG00000003821) #24 DDI1 (ENSPPYG00000003822) #23 ENSPPYG00000003823 #25 CASP4 (ENSPPYG00000003824) #26 CASP5 (ENSPPYG00000003825) #27 CASP1 (ENSPPYG00000003826) #28 ENSPPYG00000037088 ##28 ENSPPYG00000039362 #29 ENSPPYG00000034995 #29 CARD18 (ENSPPYG00000003827) #30 GRIA4 (ENSPPYG00000003828) #32 MSANTD4 (ENSPPYG00000003829) #33 KBTBD3 (ENSPPYG00000032968) #34 AASDHPPT (ENSPPYG00000003831) #35 GUCY1A2 (ENSPPYG00000003832) #36 Gibbon MODERN SPECIES 5 YAP1 (ENSNLEG00000007164) #8 ENSNLEG00000033031 BIRC3 (ENSNLEG00000007165) #9 BIRC2 (ENSNLEG00000031093) #10 TMEM123 (ENSNLEG00000007167) #11 MMP7 (ENSNLEG00000007168) #12 MMP20 (ENSNLEG00000007169) #13 MMP27 (ENSNLEG00000007170) #14 ENSNLEG00000028184 #15 MMP10 (ENSNLEG00000007177) #16 MMP1 (ENSNLEG00000007171) #17 MMP3 (ENSNLEG00000007178) #18 MMP12 (ENSNLEG00000007183) #19 MMP13 (ENSNLEG00000007186) #20 DCUN1D5 (ENSNLEG00000007189) #21 DYNC2H1 (ENSNLEG00000007190) #22 DDI1 (ENSNLEG00000019234) #23 PDGFD (ENSNLEG00000027133) #24 ENSNLEG00000027825 CASP4 (ENSNLEG00000007194) #26 CASP5 (ENSNLEG00000007197) #27 CASP1 (ENSNLEG00000007200) #28 GRIA4 (ENSNLEG00000007202) #32 MSANTD4 (ENSNLEG00000007207) #33 KBTBD3 (ENSNLEG00000007209) #34 AASDHPPT (ENSNLEG00000007211) #35 ENSNLEG00000007212 #36 ENSNLEG00000027810 #37 ENSNLEG00000034019 CWF19L2 (ENSNLEG00000007213) ALKBH8 (ENSNLEG00000007217) Platyrrhini ANCESTRAL SPECIES 3 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##28 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627.a.a ENSGT00940000158563 ENSGT00940000159782 Cebidae ANCESTRAL SPECIES ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##28 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627.a.a ENSGT00940000158563 ENSGT00940000159782 Cebidae_a ANCESTRAL SPECIES 22 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##28 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627.a.a ENSGT00940000158563 ENSGT00940000159782 ENSGT00390000015655.a Bolivian squirrel monkey MODERN SPECIES 50 ENSSBOG00000036077 YAP1 (ENSSBOG00000027497) #8 BIRC3 (ENSSBOG00000031187) #9 BIRC2 (ENSSBOG00000034069) #10 ENSSBOG00000029913 #11 MMP7 (ENSSBOG00000026550) #12 MMP20 (ENSSBOG00000023588) #13 MMP27 (ENSSBOG00000003176) #14 MMP8 (ENSSBOG00000031477) #15 MMP10 (ENSSBOG00000029788) #16 MMP1 (ENSSBOG00000034105) #17 MMP3 (ENSSBOG00000033146) #18 MMP12 (ENSSBOG00000028385) #19 MMP13 (ENSSBOG00000035950) #20 ENSSBOG00000033947 #21 DYNC2H1 (ENSSBOG00000032663) #22 PDGFD (ENSSBOG00000027472) #24 CASP4 (ENSSBOG00000023437) #26 CASP5 (ENSSBOG00000030105) #27 ENSSBOG00000028391 ##28 CASP1 (ENSSBOG00000021781) #28 CARD18 (ENSSBOG00000032567) #30 ENSSBOG00000022920 GRIA4 (ENSSBOG00000025256) #32 MSANTD4 (ENSSBOG00000031639) #33 KBTBD3 (ENSSBOG00000024589) #34 AASDHPPT (ENSSBOG00000014423) #35 GUCY1A2 (ENSSBOG00000020105) #36 CWF19L2 (ENSSBOG00000033647) ALKBH8 (ENSSBOG00000031504) ELMOD1 (ENSSBOG00000031365) Capuchin MODERN SPECIES 171 TMEM123 (ENSCCAG00000021231) #11 ENSCCAG00000017186 ENSCCAG00000026170 ENSCCAG00000015782 ENSCCAG00000028209 MMP7 (ENSCCAG00000021369) #12 MMP20 (ENSCCAG00000023652) #13 MMP27 (ENSCCAG00000034842) #14 MMP8 (ENSCCAG00000032628) #15 MMP10 (ENSCCAG00000036577) #16 MMP1 (ENSCCAG00000021222) #17 MMP3 (ENSCCAG00000029156) #18 MMP12 (ENSCCAG00000034212) #19 MMP13 (ENSCCAG00000001423) #20 DCUN1D5 (ENSCCAG00000036060) #21 DYNC2H1 (ENSCCAG00000032776) #22 PDGFD (ENSCCAG00000033710) #24 CASP4 (ENSCCAG00000025091) #26 CASP1 (ENSCCAG00000024150) #28 ENSCCAG00000023890 ##28 CARD18 (ENSCCAG00000032639) #30 ENSCCAG00000028762 GRIA4 (ENSCCAG00000021010) #32 MSANTD4 (ENSCCAG00000033896) #33 KBTBD3 (ENSCCAG00000016315) #34 AASDHPPT (ENSCCAG00000024359) #35 Marmoset MODERN SPECIES 2 BIRC2 (ENSCJAG00000003804) #10 TMEM123 (ENSCJAG00000003801) #11 MMP7 (ENSCJAG00000003793) #12 MMP20 (ENSCJAG00000003781) #13 MMP27 (ENSCJAG00000003769) #14 MMP8 (ENSCJAG00000003743) #15 MMP10 (ENSCJAG00000016298) #16 MMP1 (ENSCJAG00000014107) #17 MMP3 (ENSCJAG00000038052) #18 MMP12 (ENSCJAG00000009452) #19 MMP13 (ENSCJAG00000009477) #20 DCUN1D5 (ENSCJAG00000009502) #21 DYNC2H1 (ENSCJAG00000009549) #22 ENSCJAG00000085591 PDGFD (ENSCJAG00000009788) #24 DDI1 (ENSCJAG00000053103) #23 CASP4 (ENSCJAG00000009805) #26 ENSCJAG00000069635 #27 CASP1 (ENSCJAG00000009842) #28 ENSCJAG00000079451 ##28 ENSCJAG00000038168 ##28 CARD18 (ENSCJAG00000021995) #30 GRIA4 (ENSCJAG00000009874) #32 ENSCJAG00000073825 MSANTD4 (ENSCJAG00000046964) #33 KBTBD3 (ENSCJAG00000043912) #34 AASDHPPT (ENSCJAG00000075247) #35 ENSCJAG00000084129 Mas night monkey MODERN SPECIES 278 YAP1 (ENSANAG00000029463) #8 ENSANAG00000022618 BIRC3 (ENSANAG00000035989) #9 BIRC2 (ENSANAG00000037030) #10 TMEM123 (ENSANAG00000029026) #11 MMP7 (ENSANAG00000023347) #12 MMP20 (ENSANAG00000021702) #13 MMP27 (ENSANAG00000020509) #14 MMP8 (ENSANAG00000023440) #15 MMP3 (ENSANAG00000029899) #18 MMP1 (ENSANAG00000028859) #17 ENSANAG00000004878 MMP12 (ENSANAG00000022445) #19 MMP13 (ENSANAG00000020799) #20 DCUN1D5 (ENSANAG00000034204) #21 DYNC2H1 (ENSANAG00000035967) #22 PDGFD (ENSANAG00000023791) #24 CASP4 (ENSANAG00000027784) #26 CASP1 (ENSANAG00000032743) #28 CARD16 (ENSANAG00000028470) ##28 CARD18 (ENSANAG00000028356) #30 ENSANAG00000036500 ENSANAG00000023856 ENSANAG00000009840 Tarsier MODERN SPECIES 4417 MMP13 (ENSTSYG00000009858) #20 DCUN1D5 (ENSTSYG00000001262) #21 DYNC2H1 (ENSTSYG00000006371) #22 Strepsirrhini ANCESTRAL SPECIES 6 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162428.b ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000164349 #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 Bushbaby MODERN SPECIES 116 YAP1 (ENSOGAG00000002885) #8 ENSOGAG00000026633 BIRC3 (ENSOGAG00000005946) #9 ENSOGAG00000010377 #10 ENSOGAG00000028751 #11 MMP7 (ENSOGAG00000024291) #12 MMP20 (ENSOGAG00000015247) #13 MMP27 (ENSOGAG00000015250) #14 MMP8 (ENSOGAG00000015256) #15 MMP10 (ENSOGAG00000010212) #16 MMP1 (ENSOGAG00000010215) #17 MMP3 (ENSOGAG00000010220) #18 MMP12 (ENSOGAG00000010221) #19 MMP13 (ENSOGAG00000010224) #20 DCUN1D5 (ENSOGAG00000010225) #21 DYNC2H1 (ENSOGAG00000033838) #22 KDM4D (ENSOGAG00000032607) CWC15 (ENSOGAG00000001686) AMOTL1 (ENSOGAG00000003989) PIWIL4 (ENSOGAG00000012156) FUT4 (ENSOGAG00000025107) C11orf97 (ENSOGAG00000033264) ANKRD49 (ENSOGAG00000012155) MRE11 (ENSOGAG00000012154) GPR83 (ENSOGAG00000002520) IZUMO1R (ENSOGAG00000002522) PANX1 (ENSOGAG00000015294) HEPHL1 (ENSOGAG00000015952) ENSOGAG00000034157 ENSOGAG00000033509 ENSOGAG00000026605 Lemuriformes ANCESTRAL SPECIES 13 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000164349.b #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 Mouse lemur MODERN SPECIES 27 CFAP300 (ENSMICG00000017739) #7 YAP1 (ENSMICG00000031456) #8 BIRC3 (ENSMICG00000002746) #9 ENSMICG00000044293 ENSMICG00000016656 #11 MMP7 (ENSMICG00000002935) #12 MMP20 (ENSMICG00000002940) #13 MMP27 (ENSMICG00000036959) #14 MMP8 (ENSMICG00000014462) #15 MMP10 (ENSMICG00000006282) #16 MMP1 (ENSMICG00000006291) #17 MMP3 (ENSMICG00000006301) #18 MMP12 (ENSMICG00000006319) #19 MMP13 (ENSMICG00000006323) #20 DCUN1D5 (ENSMICG00000006329) #21 DYNC2H1 (ENSMICG00000029576) #22 PDGFD (ENSMICG00000002460) #24 DDI1 (ENSMICG00000002464) #23 ENSMICG00000001838 #26 CASP12 (ENSMICG00000001832) #25 ENSMICG00000001846 #28 ENSMICG00000028150 #30 ENSMICG00000042671 #30 GRIA4 (ENSMICG00000003112) #32 MSANTD4 (ENSMICG00000036595) #33 KBTBD3 (ENSMICG00000030981) #34 AASDHPPT (ENSMICG00000032630) #35 ENSMICG00000036566 ENSMICG00000035020 GUCY1A2 (ENSMICG00000004925) #36 CWF19L2 (ENSMICG00000010853) Lemuriformes_a ANCESTRAL SPECIES 22 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000164349.b #30 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Greater bamboo lemur MODERN SPECIES 475 YAP1 (ENSPSMG00000009653) #8 BIRC3 (ENSPSMG00000009531) #9 BIRC2 (ENSPSMG00000009475) #10 ENSPSMG00000009400 #11 MMP7 (ENSPSMG00000009394) #12 MMP20 (ENSPSMG00000009381) #13 MMP27 (ENSPSMG00000009374) #14 MMP8 (ENSPSMG00000009363) #15 ENSPSMG00000009358 #17 MMP10 (ENSPSMG00000009342) #16 MMP1 (ENSPSMG00000009331) #17 MMP3 (ENSPSMG00000009315) #18 MMP12 (ENSPSMG00000009292) #19 MMP13 (ENSPSMG00000009286) #20 DCUN1D5 (ENSPSMG00000009263) #21 DYNC2H1 (ENSPSMG00000008986) #22 DDI1 (ENSPSMG00000008421) #23 PDGFD (ENSPSMG00000008395) #24 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 760 CFAP300 (ENSPCOG00000001504) #7 YAP1 (ENSPCOG00000017226) #8 BIRC3 (ENSPCOG00000009368) #9 BIRC2 (ENSPCOG00000022626) #10 TMEM123 (ENSPCOG00000005902) #11 MMP7 (ENSPCOG00000027243) #12 MMP20 (ENSPCOG00000015806) #13 MMP27 (ENSPCOG00000024142) #14 MMP8 (ENSPCOG00000003235) #15 MMP10 (ENSPCOG00000017692) #16 MMP1 (ENSPCOG00000022669) #17 MMP3 (ENSPCOG00000023323) #18 MMP12 (ENSPCOG00000015277) #19 MMP13 (ENSPCOG00000028792) #20 DCUN1D5 (ENSPCOG00000004961) #21 ENSPCOG00000027848 #22 ENSPCOG00000025113 #22 PDGFD (ENSPCOG00000018484) #24 ENSPCOG00000021168 #26 ENSPCOG00000013698 #26 ENSPCOG00000019189 ENSPCOG00000028357 #28 CARD18 (ENSPCOG00000012524) #30 GRIA4 (ENSPCOG00000028018) #32 MSANTD4 (ENSPCOG00000023276) #33 KBTBD3 (ENSPCOG00000021176) #34 AASDHPPT (ENSPCOG00000014297) #35 GUCY1A2 (ENSPCOG00000016375) #36 ENSPCOG00000015897 CWF19L2 (ENSPCOG00000018032) ALKBH8 (ENSPCOG00000022645) Coquerels sifaka MODERN SPECIES 760 YAP1 (ENSPCOG00000017226) #8 BIRC3 (ENSPCOG00000009368) #9 BIRC2 (ENSPCOG00000022626) #10 TMEM123 (ENSPCOG00000005902) #11 MMP7 (ENSPCOG00000027243) #12 MMP20 (ENSPCOG00000015806) #13 MMP27 (ENSPCOG00000024142) #14 MMP8 (ENSPCOG00000003235) #15 MMP10 (ENSPCOG00000017692) #16 MMP1 (ENSPCOG00000022669) #17 MMP3 (ENSPCOG00000023323) #18 MMP12 (ENSPCOG00000015277) #19 MMP13 (ENSPCOG00000028792) #20 DCUN1D5 (ENSPCOG00000004961) #21 ENSPCOG00000027848 #22 ENSPCOG00000025113 #22 PDGFD (ENSPCOG00000018484) #24 ENSPCOG00000021168 #26 ENSPCOG00000013698 #26 ENSPCOG00000019189 ENSPCOG00000028357 #28 CARD18 (ENSPCOG00000012524) #30 GRIA4 (ENSPCOG00000028018) #32 MSANTD4 (ENSPCOG00000023276) #33 KBTBD3 (ENSPCOG00000021176) #34 AASDHPPT (ENSPCOG00000014297) #35 GUCY1A2 (ENSPCOG00000016375) #36 ENSPCOG00000015897 CWF19L2 (ENSPCOG00000018032) ALKBH8 (ENSPCOG00000022645) ELMOD1 (ENSPCOG00000023055) Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000162428.b ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 ENSGT00940000168471 Glires ANCESTRAL SPECIES 1 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000162428.b ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 ENSGT00940000168471 Lagomorpha ANCESTRAL SPECIES 5 ENSGT00940000161966 ENSGT00390000013786 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000162428.b ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000158563 ENSGT00390000008536 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E Pika DUPLICATION Pika DUPLICATION Pika MODERN SPECIES 2838 ENSOPRG00000007743 #21 ENSOPRG00000018732 #22 ENSOPRG00000010701 #22 ENSOPRG00000016082 #22 Pika MODERN SPECIES 2838 ENSOPRG00000007743 #21 ENSOPRG00000018732 #22 ENSOPRG00000010701 #22 ENSOPRG00000016082 #22 Pika MODERN SPECIES 2838 ENSOPRG00000007743 #21 ENSOPRG00000018732 #22 ENSOPRG00000010701 #22 ENSOPRG00000016082 #22 Rabbit MODERN SPECIES BIRC3 (ENSOCUG00000010109) #9 BIRC2 (ENSOCUG00000013890) #10 ENSOCUG00000006165 #11 MMP7 (ENSOCUG00000015329) #12 MMP20 (ENSOCUG00000002930) #13 MMP27 (ENSOCUG00000001090) #14 MMP8 (ENSOCUG00000001092) #15 MMP10 (ENSOCUG00000021775) #16 MMP1 (ENSOCUG00000017958) #17 MMP3 (ENSOCUG00000029337) #18 MMP12 (ENSOCUG00000008303) #19 ENSOCUG00000011333 ENSOCUG00000029729 MMP13 (ENSOCUG00000002481) #20 DCUN1D5 (ENSOCUG00000006512) #21 DYNC2H1 (ENSOCUG00000016257) #22 DDI1 (ENSOCUG00000015321) #23 PDGFD (ENSOCUG00000015312) #24 ENSOCUG00000007503 #26 ENSOCUG00000001103 #28 ENSOCUG00000029247 GRIA4 (ENSOCUG00000001089) #32 MSANTD4 (ENSOCUG00000022457) #33 KBTBD3 (ENSOCUG00000000230) #34 AASDHPPT (ENSOCUG00000000231) #35 ENSOCUG00000023190 ENSOCUG00000036599 GUCY1A2 (ENSOCUG00000004490) #36 ENSOCUG00000038405 CWF19L2 (ENSOCUG00000025398) ELMOD1 (ENSOCUG00000011869) Rodentia ANCESTRAL SPECIES 1 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Rodentia_A ANCESTRAL SPECIES 1 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Sciuridae ANCESTRAL SPECIES 2 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162428.b ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a ENSGT00940000159933 Marmotini ANCESTRAL SPECIES 20 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b.e #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162428.b ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a ENSGT00940000159933 Marmotini_b ANCESTRAL SPECIES 122 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b.e #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162428.b ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a ENSGT00940000159933 Squirrel MODERN SPECIES 151 YAP1 (ENSSTOG00000004960) #8 BIRC3 (ENSSTOG00000005734) #9 ENSSTOG00000005754 #10 ENSSTOG00000026499 TMEM123 (ENSSTOG00000032785) #11 MMP7 (ENSSTOG00000027961) #12 MMP20 (ENSSTOG00000023437) #13 MMP27 (ENSSTOG00000008513) #14 MMP8 (ENSSTOG00000008539) #15 ENSSTOG00000008555 #18 MMP1 (ENSSTOG00000008571) #17 MMP3 (ENSSTOG00000008584) #18 MMP12 (ENSSTOG00000008600) #19 MMP13 (ENSSTOG00000008612) #20 DCUN1D5 (ENSSTOG00000013580) #21 DYNC2H1 (ENSSTOG00000026849) #22 DDI1 (ENSSTOG00000004248) #23 PDGFD (ENSSTOG00000004230) #24 ENSSTOG00000002855 ENSSTOG00000007964 #28 GRIA4 (ENSSTOG00000000265) #32 MSANTD4 (ENSSTOG00000027044) #33 KBTBD3 (ENSSTOG00000001079) #34 AASDHPPT (ENSSTOG00000000268) #35 GUCY1A2 (ENSSTOG00000013157) #36 ENSSTOG00000027350 ENSSTOG00000033115 ALKBH8 (ENSSTOG00000024939) ELMOD1 (ENSSTOG00000001237) ENSSTOG00000001241 SLC35F2 (ENSSTOG00000011321) Arctic ground squirrel MODERN SPECIES 103 CEP126 (ENSUPAG00010019487) CFAP300 (ENSUPAG00010019501) #7 YAP1 (ENSUPAG00010019515) #8 BIRC3 (ENSUPAG00010019528) #9 BIRC2 (ENSUPAG00010019549) #10 TMEM123 (ENSUPAG00010019562) #11 MMP7 (ENSUPAG00010019569) #12 MMP20 (ENSUPAG00010019573) #13 MMP27 (ENSUPAG00010019583) #14 MMP8 (ENSUPAG00010019593) #15 MMP3 (ENSUPAG00010019608) #18 MMP1 (ENSUPAG00010019633) #17 MMP12 (ENSUPAG00010019655) #19 MMP13 (ENSUPAG00010019662) #20 DCUN1D5 (ENSUPAG00010019672) #21 DYNC2H1 (ENSUPAG00010019688) #22 PDGFD (ENSUPAG00010019962) #24 DDI1 (ENSUPAG00010019982) #23 ENSUPAG00010019986 ENSUPAG00010019990 #28 ENSUPAG00010020000 Alpin marmot MODERN SPECIES 25 CFAP300 (ENSMMMG00000002751) #7 YAP1 (ENSMMMG00000002718) #8 BIRC3 (ENSMMMG00000002693) #9 ENSMMMG00000002595 #10 TMEM123 (ENSMMMG00000002579) #11 MMP7 (ENSMMMG00000002551) #12 MMP20 (ENSMMMG00000002519) #13 MMP27 (ENSMMMG00000002490) #14 MMP8 (ENSMMMG00000002471) #15 ENSMMMG00000002452 #18 MMP1 (ENSMMMG00000002402) #17 MMP3 (ENSMMMG00000002377) #18 MMP12 (ENSMMMG00000002359) #19 MMP13 (ENSMMMG00000002337) #20 DCUN1D5 (ENSMMMG00000002318) #21 DYNC2H1 (ENSMMMG00000001718) #22 ENSMMMG00000001663 ENSMMMG00000001653 DDI1 (ENSMMMG00000001629) #23 PDGFD (ENSMMMG00000001580) #24 ENSMMMG00000001554 ENSMMMG00000001523 #28 ENSMMMG00000001357 ENSMMMG00000001339 GRIA4 (ENSMMMG00000001185) #32 MSANTD4 (ENSMMMG00000001156) #33 KBTBD3 (ENSMMMG00000001143) #34 AASDHPPT (ENSMMMG00000001128) #35 ENSMMMG00000001082 #36 CWF19L2 (ENSMMMG00000001043) ALKBH8 (ENSMMMG00000000941) Eurasian red squirrel MODERN SPECIES 2 CFAP300 (ENSSVLG00005013383) #7 YAP1 (ENSSVLG00005013738) #8 BIRC3 (ENSSVLG00005013872) #9 BIRC2 (ENSSVLG00005013957) #10 TMEM123 (ENSSVLG00005014049) #11 MMP7 (ENSSVLG00005014206) #12 MMP20 (ENSSVLG00005014300) #13 MMP27 (ENSSVLG00005014388) #14 MMP8 (ENSSVLG00005014523) #15 MMP10 (ENSSVLG00005014643) #16 MMP1 (ENSSVLG00005014774) #17 MMP3 (ENSSVLG00005014901) #18 MMP12 (ENSSVLG00005015038) #19 MMP13 (ENSSVLG00005015162) #20 DCUN1D5 (ENSSVLG00005015275) #21 DYNC2H1 (ENSSVLG00005015721) #22 ENSSVLG00005018071 ENSSVLG00005018153 PDGFD (ENSSVLG00005018195) #24 DDI1 (ENSSVLG00005018324) #23 ENSSVLG00005018358 ENSSVLG00005018566 #28 ENSSVLG00005019096 GRIA4 (ENSSVLG00005019563) #32 MSANTD4 (ENSSVLG00005019923) #33 KBTBD3 (ENSSVLG00005019983) #34 AASDHPPT (ENSSVLG00005020020) #35 ENSSVLG00005020058 GUCY1A2 (ENSSVLG00005020104) #36 CWF19L2 (ENSSVLG00005020205) ENSSVLG00005020267 Hystricomorpha ANCESTRAL SPECIES 5 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a Hystricomorpha_a ANCESTRAL SPECIES 10 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a Hystricomorpha_b ANCESTRAL SPECIES 23 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a Long-tailed chinchilla MODERN SPECIES 119 CEP126 (ENSCLAG00000012819) CFAP300 (ENSCLAG00000013914) #7 YAP1 (ENSCLAG00000011113) #8 BIRC3 (ENSCLAG00000010783) #9 BIRC2 (ENSCLAG00000013394) #10 MMP7 (ENSCLAG00000015356) #12 MMP20 (ENSCLAG00000013214) #13 MMP27 (ENSCLAG00000010798) #14 MMP8 (ENSCLAG00000014040) #15 MMP10 (ENSCLAG00000013443) #16 MMP1 (ENSCLAG00000011491) #17 MMP3 (ENSCLAG00000012886) #18 MMP12 (ENSCLAG00000014288) #19 MMP13 (ENSCLAG00000011293) #20 DCUN1D5 (ENSCLAG00000010606) #21 DYNC2H1 (ENSCLAG00000014268) #22 PDGFD (ENSCLAG00000013637) #24 DDI1 (ENSCLAG00000014263) #23 ENSCLAG00000015891 #25 ENSCLAG00000012832 #26 ENSCLAG00000015719 #28 GRIA4 (ENSCLAG00000012261) #32 MSANTD4 (ENSCLAG00000016121) #33 KBTBD3 (ENSCLAG00000014468) #34 AASDHPPT (ENSCLAG00000015434) #35 GUCY1A2 (ENSCLAG00000017060) #36 CWF19L2 (ENSCLAG00000013844) ENSCLAG00000015715 ENSCLAG00000011087 ELMOD1 (ENSCLAG00000011927) ENSCLAG00000011651 Degu MODERN SPECIES 53 CFAP300 (ENSODEG00000014307) #7 ENSODEG00000013051 YAP1 (ENSODEG00000012897) #8 ENSODEG00000012579 ENSODEG00000013275 #9 ENSODEG00000012602 #10 MMP7 (ENSODEG00000012568) #12 MMP20 (ENSODEG00000012590) #13 MMP27 (ENSODEG00000012636) #14 MMP8 (ENSODEG00000013316) #15 MMP10 (ENSODEG00000014848) #16 MMP3 (ENSODEG00000012755) #18 MMP12 (ENSODEG00000012714) #19 MMP13 (ENSODEG00000012128) #20 DCUN1D5 (ENSODEG00000012893) #21 DYNC2H1 (ENSODEG00000012699) #22 DDI1 (ENSODEG00000011789) #23 PDGFD (ENSODEG00000011848) #24 ENSODEG00000012044 #25 ENSODEG00000011629 #26 ENSODEG00000013241 #28 GRIA4 (ENSODEG00000012048) #32 MSANTD4 (ENSODEG00000011017) #33 KBTBD3 (ENSODEG00000012092) #34 ENSODEG00000011994 #35 ENSODEG00000012492 #36 ENSODEG00000013543 ALKBH8 (ENSODEG00000011567) ENSODEG00000020136 ELMOD1 (ENSODEG00000015056) SLC35F2 (ENSODEG00000012070) Guinea pig MODERN SPECIES 19 CEP126 (ENSCPOG00000001844) CFAP300 (ENSCPOG00000011737) #7 YAP1 (ENSCPOG00000033105) #8 BIRC3 (ENSCPOG00000034907) #9 BIRC2 (ENSCPOG00000010349) #10 ENSCPOG00000038069 #12 MMP20 (ENSCPOG00000036970) #13 MMP27 (ENSCPOG00000035593) #14 MMP8 (ENSCPOG00000013813) #15 MMP10 (ENSCPOG00000035812) #16 MMP1 (ENSCPOG00000006548) #17 MMP3 (ENSCPOG00000033163) #18 MMP12 (ENSCPOG00000036913) #19 MMP13 (ENSCPOG00000000221) #20 DCUN1D5 (ENSCPOG00000036831) #21 DYNC2H1 (ENSCPOG00000014189) #22 PDGFD (ENSCPOG00000038919) #24 DDI1 (ENSCPOG00000000861) #23 CASP12 (ENSCPOG00000035596) #25 ENSCPOG00000011825 #26 ENSCPOG00000026333 #28 ENSCPOG00000009512 #26 GRIA4 (ENSCPOG00000001062) #32 MSANTD4 (ENSCPOG00000033859) #33 KBTBD3 (ENSCPOG00000003792) #34 AASDHPPT (ENSCPOG00000030678) #35 ENSCPOG00000040462 GUCY1A2 (ENSCPOG00000000335) #36 B3GAT1 (ENSCPOG00000023573) GLB1L2 (ENSCPOG00000000945) GLB1L3 (ENSCPOG00000034065) Naked mole-rat female MODERN SPECIES 24 TRPC6 (ENSHGLG00000000680) PGR (ENSHGLG00000001843) ENSHGLG00000000253 ENSHGLG00000002861 ENSHGLG00000003321 #14 MMP8 (ENSHGLG00000003235) #15 MMP10 (ENSHGLG00000003158) #16 MMP1 (ENSHGLG00000002821) #17 MMP3 (ENSHGLG00000001578) #18 MMP12 (ENSHGLG00000001493) #19 ENSHGLG00000042652 ENSHGLG00000016013 MMP13 (ENSHGLG00000000539) #20 ENSHGLG00000000439 #21 ENSHGLG00000000377 ENSHGLG00000001041 #22 ENSHGLG00000026082 ENSHGLG00000001157 DDI1 (ENSHGLG00000019795) #23 PDGFD (ENSHGLG00000050700) #24 ENSHGLG00000002176 ENSHGLG00000002557 #25 ENSHGLG00000000369 #26 ENSHGLG00000000196 #28 ENSHGLG00000034907 GRIA4 (ENSHGLG00000007205) #32 MSANTD4 (ENSHGLG00000015607) #33 KBTBD3 (ENSHGLG00000015784) #34 ENSHGLG00000015842 #35 ENSHGLG00000042979 GUCY1A2 (ENSHGLG00000017468) #36 Rodentia_B ANCESTRAL SPECIES 23 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Kangaroo rat MODERN SPECIES 329 Msantd2 (ENSDORG00000002743) Esam (ENSDORG00000028051) Vsig2 (ENSDORG00000002740) Nrgn (ENSDORG00000002739) Spa17 (ENSDORG00000023533) Siae (ENSDORG00000002735) Tbrg1 (ENSDORG00000002733) Panx3 (ENSDORG00000002966) ENSDORG00000027724 ENSDORG00000024857 ENSDORG00000027698 ENSDORG00000027629 ENSDORG00000024038 Or8b8 (ENSDORG00000027079) Dcun1d5 (ENSDORG00000001635) #21 Dync2h1 (ENSDORG00000010115) #22 Pdgfd (ENSDORG00000014006) #24 Ddi1 (ENSDORG00000002404) #23 Casp4 (ENSDORG00000016256) Casp1 (ENSDORG00000016257) #28 ENSDORG00000023554 #32 Msantd4 (ENSDORG00000023419) #33 Kbtbd3 (ENSDORG00000012680) #34 Aasdhppt (ENSDORG00000012684) #35 Gucy1a2 (ENSDORG00000007568) #36 ENSDORG00000008595 Alkbh8 (ENSDORG00000008596) Elmod1 (ENSDORG00000008597) Sln (ENSDORG00000026414) Slc35f2 (ENSDORG00000016340) Rab39 (ENSDORG00000026121) Myomorpha ANCESTRAL SPECIES 23 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Lesser Egyptian jerboa MODERN SPECIES 87 Cfap300 (ENSJJAG00000022122) #7 ENSJJAG00000015982 ENSJJAG00000010414 #8 ENSJJAG00000021580 #9 ENSJJAG00000017306 #10 Tmem123 (ENSJJAG00000014178) #11 Mmp7 (ENSJJAG00000009326) #12 Mmp20 (ENSJJAG00000020407) #13 Mmp27 (ENSJJAG00000011497) #14 Mmp8 (ENSJJAG00000021566) #15 ENSJJAG00000020496 #16 ENSJJAG00000010013 #17 Mmp12 (ENSJJAG00000019762) #19 Mmp13 (ENSJJAG00000013818) #20 Dcun1d5 (ENSJJAG00000004999) #21 Dync2h1 (ENSJJAG00000000557) #22 ENSJJAG00000016889 Ddi1 (ENSJJAG00000000750) #23 Pdgfd (ENSJJAG00000020441) #24 Muroidea ANCESTRAL SPECIES 29 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Upper Galilee mountains blind mole rat MODERN SPECIES 401 Birc2 (ENSNGAG00000011071) #10 ENSNGAG00000000138 #11 Mmp7 (ENSNGAG00000000983) #12 Mmp20 (ENSNGAG00000001298) #13 Mmp27 (ENSNGAG00000001467) #14 Mmp8 (ENSNGAG00000009311) #15 ENSNGAG00000011580 #16 ENSNGAG00000012427 #17 Mmp3 (ENSNGAG00000008287) #18 Mmp12 (ENSNGAG00000012323) #19 Mmp13 (ENSNGAG00000013401) #20 Dcun1d5 (ENSNGAG00000013687) #21 Dync2h1 (ENSNGAG00000000125) #22 Pdgfd (ENSNGAG00000016717) #24 Muroidea_A ANCESTRAL SPECIES 23 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 Murinae ANCESTRAL SPECIES 3 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000159759 #18 ENSGT00940000154907.b.m #17 ENSGT00940000154907.b.n #17 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 Mus ANCESTRAL SPECIES 4 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000159759 #18 ENSGT00940000154907.b.m #17 ENSGT00940000154907.b.n #17 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 Mus_A ANCESTRAL SPECIES 4 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000159759 #18 ENSGT00940000154907.b.m #17 ENSGT00940000154907.b.n #17 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 Mus_B ANCESTRAL SPECIES 3 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000159759 #18 ENSGT00940000154907.b.m #17 ENSGT00940000154907.b.n #17 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 Mus_C ANCESTRAL SPECIES 8 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000159759 #18 ENSGT00940000154907.b.m #17 ENSGT00940000154907.b.n #17 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 spretus MODERN SPECIES 18 Yap1 (MGP_SPRETEiJ_G0032883) #8 Birc3 (MGP_SPRETEiJ_G0032882) #9 MGP_SPRETEiJ_G0032881 #10 Tmem123 (MGP_SPRETEiJ_G0032880) #11 Mmp7 (MGP_SPRETEiJ_G0032879) #12 Mmp20 (MGP_SPRETEiJ_G0032878) #13 Mmp27 (MGP_SPRETEiJ_G0032877) #14 Mmp8 (MGP_SPRETEiJ_G0032876) #15 MGP_SPRETEiJ_G0032875 #18 MGP_SPRETEiJ_G0032874 #17 MGP_SPRETEiJ_G0032873 #17 MGP_SPRETEiJ_G0032872 #18 Mmp12 (MGP_SPRETEiJ_G0032871) #19 Mmp13 (MGP_SPRETEiJ_G0032870) #20 MGP_SPRETEiJ_G0032869 #21 Dync2h1 (MGP_SPRETEiJ_G0032868) #22 Ddi1 (MGP_SPRETEiJ_G0032867) #23 Pdgfd (MGP_SPRETEiJ_G0032866) #24 Casp12 (MGP_SPRETEiJ_G0032865) #25 Casp4 (MGP_SPRETEiJ_G0032864) Casp1 (MGP_SPRETEiJ_G0032863) #28 Gria4 (MGP_SPRETEiJ_G0032862) #32 Msantd4 (MGP_SPRETEiJ_G0032861) #33 Kbtbd3 (MGP_SPRETEiJ_G0032860) #34 Aasdhppt (MGP_SPRETEiJ_G0032859) #35 Gucy1a2 (MGP_SPRETEiJ_G0032858) #36 Cwf19l2 (MGP_SPRETEiJ_G0032857) Alkbh8 (MGP_SPRETEiJ_G0032856) Steppe mouse MODERN SPECIES 3057 Mmp7 (ENSMSIG00000018503) #12 Mmp20 (ENSMSIG00000018527) #13 Mmp27 (ENSMSIG00000018549) #14 Mmp8 (ENSMSIG00000018618) #15 Mmp10 (ENSMSIG00000018646) #18 Mmp1a (ENSMSIG00000018671) #17 Mmp3 (ENSMSIG00000018686) #18 Mmp1b (ENSMSIG00000018722) #17 Mmp12 (ENSMSIG00000018748) #19 ENSMSIG00000018840 Mmp13 (ENSMSIG00000018843) #20 Dcun1d5 (ENSMSIG00000018871) #21 Dync2h1 (ENSMSIG00000018981) #22 Pdgfd (ENSMSIG00000019889) #24 Ddi1 (ENSMSIG00000019916) #23 Mouse MODERN SPECIES 18 Yap1 (ENSMUSG00000053110) #8 Birc3 (ENSMUSG00000032000) #9 Birc2 (ENSMUSG00000057367) #10 Tmem123 (ENSMUSG00000050912) #11 Mmp7 (ENSMUSG00000018623) #12 Mmp20 (ENSMUSG00000018620) #13 Mmp27 (ENSMUSG00000070323) #14 Mmp8 (ENSMUSG00000005800) #15 Mmp10 (ENSMUSG00000047562) #18 Mmp1a (ENSMUSG00000043089) #17 Mmp3 (ENSMUSG00000043613) #18 Mmp1b (ENSMUSG00000041620) #17 Mmp12 (ENSMUSG00000049723) #19 Mmp13 (ENSMUSG00000050578) #20 Dcun1d5 (ENSMUSG00000032002) #21 Dync2h1 (ENSMUSG00000047193) #22 Ddi1 (ENSMUSG00000047619) #23 Pdgfd (ENSMUSG00000032006) #24 Casp12 (ENSMUSG00000025887) #25 Casp4 (ENSMUSG00000033538) Casp1 (ENSMUSG00000025888) #28 Gria4 (ENSMUSG00000025892) #32 Msantd4 (ENSMUSG00000041124) #33 Kbtbd3 (ENSMUSG00000025893) #34 Aasdhppt (ENSMUSG00000025894) #35 Gucy1a2 (ENSMUSG00000041624) #36 Cwf19l2 (ENSMUSG00000025898) Alkbh8 (ENSMUSG00000025899) Ryukyu mouse MODERN SPECIES 18 Yap1 (MGP_CAROLIEiJ_G0031763) #8 MGP_CAROLIEiJ_G0031762 #9 MGP_CAROLIEiJ_G0031761 ##9 Tmem123 (MGP_CAROLIEiJ_G0031760) #11 Mmp7 (MGP_CAROLIEiJ_G0031759) #12 Mmp20 (MGP_CAROLIEiJ_G0031758) #13 Mmp27 (MGP_CAROLIEiJ_G0031757) #14 Mmp8 (MGP_CAROLIEiJ_G0031756) #15 Mmp10 (MGP_CAROLIEiJ_G0031755) #18 Mmp1a (MGP_CAROLIEiJ_G0031754) #17 Mmp1b (MGP_CAROLIEiJ_G0031753) #17 Mmp3 (MGP_CAROLIEiJ_G0031752) #18 Mmp12 (MGP_CAROLIEiJ_G0031751) #19 Mmp13 (MGP_CAROLIEiJ_G0031750) #20 MGP_CAROLIEiJ_G0031749 #21 Dync2h1 (MGP_CAROLIEiJ_G0031748) #22 Ddi1 (MGP_CAROLIEiJ_G0031747) #23 Pdgfd (MGP_CAROLIEiJ_G0031746) #24 Casp12 (MGP_CAROLIEiJ_G0031745) #25 Casp4 (MGP_CAROLIEiJ_G0031744) Casp1 (MGP_CAROLIEiJ_G0031743) #28 Gria4 (MGP_CAROLIEiJ_G0031742) #32 Msantd4 (MGP_CAROLIEiJ_G0031741) #33 Kbtbd3 (MGP_CAROLIEiJ_G0031740) #34 Aasdhppt (MGP_CAROLIEiJ_G0031739) #35 Gucy1a2 (MGP_CAROLIEiJ_G0031738) #36 Cwf19l2 (MGP_CAROLIEiJ_G0031737) Shrew mouse MODERN SPECIES 1 Cfap300 (MGP_PahariEiJ_G0014642) #7 Yap1 (MGP_PahariEiJ_G0014641) #8 Birc3 (MGP_PahariEiJ_G0014640) #9 MGP_PahariEiJ_G0014639 Tmem123 (MGP_PahariEiJ_G0014638) #11 Mmp7 (MGP_PahariEiJ_G0014637) #12 Mmp20 (MGP_PahariEiJ_G0014636) #13 Mmp27 (MGP_PahariEiJ_G0014635) #14 Mmp8 (MGP_PahariEiJ_G0014634) #15 Mmp10 (MGP_PahariEiJ_G0014633) #18 Mmp3 (MGP_PahariEiJ_G0014632) #18 Mmp1b (MGP_PahariEiJ_G0014631) #17 Mmp12 (MGP_PahariEiJ_G0014630) #19 Mmp13 (MGP_PahariEiJ_G0014629) #20 MGP_PahariEiJ_G0014628 #21 Dync2h1 (MGP_PahariEiJ_G0014627) #22 Ddi1 (MGP_PahariEiJ_G0014626) #23 Pdgfd (MGP_PahariEiJ_G0014625) #24 MGP_PahariEiJ_G0014624 #25 Casp4 (MGP_PahariEiJ_G0014623) Casp1 (MGP_PahariEiJ_G0014622) #28 Gria4 (MGP_PahariEiJ_G0014621) #32 Msantd4 (MGP_PahariEiJ_G0014620) #33 Kbtbd3 (MGP_PahariEiJ_G0014619) #34 Aasdhppt (MGP_PahariEiJ_G0014618) #35 Gucy1a2 (MGP_PahariEiJ_G0014617) #36 Cwf19l2 (MGP_PahariEiJ_G0014616) Alkbh8 (MGP_PahariEiJ_G0014615) Rat MODERN SPECIES 18 Yap1 (ENSRNOG00000005933) #8 Birc3 (ENSRNOG00000005731) #9 Birc2 (ENSRNOG00000010602) #10 Tmem123 (ENSRNOG00000010584) #11 Mmp7 (ENSRNOG00000010507) #12 Mmp20 (ENSRNOG00000021896) #13 Mmp27 (ENSRNOG00000040208) #14 Mmp8 (ENSRNOG00000009907) #15 Mmp10 (ENSRNOG00000032832) #18 Mmp1 (ENSRNOG00000032353) #17 Mmp3 (ENSRNOG00000032626) #18 Mmp1b (ENSRNOG00000008881) #17 Mmp12 (ENSRNOG00000030187) #19 Mmp13 (ENSRNOG00000008478) #20 Dcun1d5 (ENSRNOG00000008390) #21 Dync2h1 (ENSRNOG00000032070) #22 Ddi1 (ENSRNOG00000022081) #23 ENSRNOG00000065876 Pdgfd (ENSRNOG00000029148) #24 ENSRNOG00000066836 ENSRNOG00000069423 Casp12 (ENSRNOG00000033434) #25 Casp4 (ENSRNOG00000033697) Casp1 (ENSRNOG00000007372) #28 Gria4 (ENSRNOG00000006957) #32 Msantd4 (ENSRNOG00000022245) #33 Kbtbd3 (ENSRNOG00000069206) #34 Aasdhppt (ENSRNOG00000005795) #35 ENSRNOG00000066855 AABR07068905.1 (ENSRNOG00000062096) Gucy1a2 (ENSRNOG00000029876) #36 Cricetidae ANCESTRAL SPECIES 4 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759.h #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 Cricetidae_B ANCESTRAL SPECIES 58 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759.h #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 Northern American deer mouse MODERN SPECIES 20 Cfap300 (ENSPEMG00000021710) #7 Yap1 (ENSPEMG00000022927) #8 Birc3 (ENSPEMG00000020508) #9 Birc2 (ENSPEMG00000018476) #10 Tmem123 (ENSPEMG00000023085) #11 Mmp7 (ENSPEMG00000021337) #12 Mmp20 (ENSPEMG00000011175) #13 Mmp27 (ENSPEMG00000024216) #14 Mmp8 (ENSPEMG00000022864) #15 Mmp10 (ENSPEMG00000021262) #18 ENSPEMG00000020690 #17 Mmp3 (ENSPEMG00000020327) #18 Mmp12 (ENSPEMG00000020371) #19 Mmp13 (ENSPEMG00000011633) #20 Dcun1d5 (ENSPEMG00000020877) #21 Dync2h1 (ENSPEMG00000016383) #22 Pdgfd (ENSPEMG00000013246) #24 ENSPEMG00000028818 ENSPEMG00000021102 Casp12 (ENSPEMG00000022171) #25 ENSPEMG00000008389 #28 ENSPEMG00000026130 #28 ENSPEMG00000025268 ENSPEMG00000025774 Gria4 (ENSPEMG00000005300) #32 Msantd4 (ENSPEMG00000029468) #33 Kbtbd3 (ENSPEMG00000029070) #34 Aasdhppt (ENSPEMG00000016551) #35 ENSPEMG00000025699 Gucy1a2 (ENSPEMG00000021986) #36 Cwf19l2 (ENSPEMG00000022399) Prairie vole MODERN SPECIES 13 Cfap300 (ENSMOCG00000013197) #7 Yap1 (ENSMOCG00000007486) #8 Birc3 (ENSMOCG00000013964) #9 Birc2 (ENSMOCG00000010117) #10 Tmem123 (ENSMOCG00000021990) #11 Mmp7 (ENSMOCG00000021222) #12 Mmp20 (ENSMOCG00000019578) #13 Mmp27 (ENSMOCG00000018511) #14 Mmp8 (ENSMOCG00000009399) #15 ENSMOCG00000007239 #16 ENSMOCG00000023030 #17 Mmp3 (ENSMOCG00000006156) #18 Mmp12 (ENSMOCG00000020347) #19 Mmp13 (ENSMOCG00000010248) #20 Dcun1d5 (ENSMOCG00000008925) #21 Dync2h1 (ENSMOCG00000017521) #22 Pdgfd (ENSMOCG00000014518) #24 Casp1 (ENSMOCG00000019444) #28 ENSMOCG00000004515 Gria4 (ENSMOCG00000011931) #32 Cricetinae ANCESTRAL SPECIES 45 ENSGT01060000248588.a.d.a ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759.h #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000156079 ENSGT00940000159308 Golden Hamster MODERN SPECIES 688 Cntn5 (ENSMAUG00000012675) Arhgap42 (ENSMAUG00000012529) Pgr (ENSMAUG00000019127) Trpc6 (ENSMAUG00000014533) Cep126 (ENSMAUG00000013444) Cfap300 (ENSMAUG00000011879) #7 Birc2 (ENSMAUG00000018063) #10 ENSMAUG00000016756 #18 Mmp20 (ENSMAUG00000011367) #13 Mmp27 (ENSMAUG00000000778) #14 ENSMAUG00000009988 #17 Mmp3 (ENSMAUG00000011335) #18 Mmp12 (ENSMAUG00000008249) #19 Mmp13 (ENSMAUG00000001270) #20 Dcun1d5 (ENSMAUG00000011071) #21 Dync2h1 (ENSMAUG00000015798) #22 Pdgfd (ENSMAUG00000012917) #24 Ddi1 (ENSMAUG00000016614) #23 Casp1 (ENSMAUG00000010193) #28 ENSMAUG00000016775 #32 Msantd4 (ENSMAUG00000009891) #33 Kbtbd3 (ENSMAUG00000009346) #34 ENSMAUG00000008521 #35 Gucy1a2 (ENSMAUG00000011689) #36 ENSMAUG00000008207 Or7g16 (ENSMAUG00000000891) Or7g30 (ENSMAUG00000010230) Or7g32 (ENSMAUG00000009330) ENSMAUG00000007695 ENSMAUG00000012374 Or7d11 (ENSMAUG00000016586) Chinese hamster chok1gshd MODERN SPECIES 202 Birc3 (ENSCGRG00001008505) #9 Birc2 (ENSCGRG00001023266) #10 ENSCGRG00001022513 Tmem123 (ENSCGRG00001018797) #11 ENSCGRG00001015482 #20 Mmp20 (ENSCGRG00001000330) #13 Mmp27 (ENSCGRG00001021757) #14 Mmp8 (ENSCGRG00001015038) #15 ENSCGRG00001014094 #16 ENSCGRG00001020530 #17 ENSCGRG00001009381 Mmp3 (ENSCGRG00001015501) #18 Mmp12 (ENSCGRG00001013053) #19 Mmp13 (ENSCGRG00001006492) #20 Dcun1d5 (ENSCGRG00001014535) #21 Dync2h1 (ENSCGRG00001013236) #22 Ddi1 (ENSCGRG00001005855) #23 Pdgfd (ENSCGRG00001019661) #24 ENSCGRG00001004505 Casp12 (ENSCGRG00001018352) #25 Casp1 (ENSCGRG00001009135) #28 Gria4 (ENSCGRG00001016770) #32 Msantd4 (ENSCGRG00001019387) #33 Kbtbd3 (ENSCGRG00001018771) #34 ENSCGRG00001018331 #35 Gucy1a2 (ENSCGRG00001016426) #36 Cwf19l2 (ENSCGRG00001010585) Alkbh8 (ENSCGRG00001011248) Fam135b (ENSCGRG00001009898) Col22a1 (ENSCGRG00001011324) ENSCGRG00001022989 Tree shrew DUPLICATION Tree shrew MODERN SPECIES 4711 ENSTBEG00000009456 #22 Tree shrew MODERN SPECIES 1791 MMP20 (ENSTBEG00000014473) #13 MMP27 (ENSTBEG00000015035) #14 MMP8 (ENSTBEG00000015520) #15 MMP10 (ENSTBEG00000016136) #16 MMP1 (ENSTBEG00000017080) #17 MMP3 (ENSTBEG00000017424) #18 MMP12 (ENSTBEG00000009604) #19 MMP13 (ENSTBEG00000009968) #20 DCUN1D5 (ENSTBEG00000010532) #21 ENSTBEG00000011130 #22 Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000162428.b ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 Eulipotyphla ANCESTRAL SPECIES 2205 ENSGT00940000156155 #21 ENSGT00940000154620 #22 Hedgehog DUPLICATION Hedgehog MODERN SPECIES 7865 ENSEEUG00000012605 #22 ENSEEUG00000012670 #22 Hedgehog MODERN SPECIES 7865 ENSEEUG00000012605 #22 ENSEEUG00000012670 #22 Common shrew DUPLICATION Common shrew MODERN SPECIES 2637 DCUN1D5 (ENSSARG00000003213) #21 ENSSARG00000003244 #22 ENSSARG00000003282 #22 Common shrew MODERN SPECIES 2637 DCUN1D5 (ENSSARG00000003213) #21 ENSSARG00000003244 #22 ENSSARG00000003282 #22 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000162428.b ENSGT01030000234886 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 Artiodactyla ANCESTRAL SPECIES 1 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT01040000240879 Suina ANCESTRAL SPECIES 5 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00910000148412 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 ENSGT00390000015655.a Pig MODERN SPECIES 17 CFAP300 (ENSSSCG00000014980) #7 YAP1 (ENSSSCG00000031429) #8 BIRC3 (ENSSSCG00000027529) #9 BIRC2 (ENSSSCG00000063374) #10 ENSSSCG00000031170 #11 MMP7 (ENSSSCG00000014982) #12 MMP20 (ENSSSCG00000014983) #13 MMP27 (ENSSSCG00000014984) #14 MMP8 (ENSSSCG00000029675) #15 MMP1 (ENSSSCG00000014985) #17 MMP3 (ENSSSCG00000059078) #18 MMP12 (ENSSSCG00000014987) #19 MMP13 (ENSSSCG00000014988) #20 ENSSSCG00000035427 DCUN1D5 (ENSSSCG00000014989) #21 DYNC2H1 (ENSSSCG00000033937) #22 PDGFD (ENSSSCG00000014994) #24 DDI1 (ENSSSCG00000014995) #23 ENSSSCG00000032358 ENSSSCG00000014996 #25 ENSSSCG00000014997 #26 CASP1 (ENSSSCG00000028711) #28 ENSSSCG00000037097 GRIA4 (ENSSSCG00000030565) #32 MSANTD4 (ENSSSCG00000026833) #33 AASDHPPT (ENSSSCG00000014998) #35 KBTBD3 (ENSSSCG00000014999) #34 CWF19L2 (ENSSSCG00000028201) ENSSSCG00000056752 ALKBH8 (ENSSSCG00000024628) ELMOD1 (ENSSSCG00000015002) Chacoan peccary MODERN SPECIES 29 YAP1 (ENSCWAG00000000439) #8 BIRC3 (ENSCWAG00000000395) #9 BIRC2 (ENSCWAG00000000357) #10 ENSCWAG00000000343 TMEM123 (ENSCWAG00000000329) #11 MMP7 (ENSCWAG00000000312) #12 MMP20 (ENSCWAG00000000288) #13 MMP27 (ENSCWAG00000000250) #14 MMP8 (ENSCWAG00000000204) #15 ENSCWAG00000000098 #17 MMP1 (ENSCWAG00000009665) #17 MMP3 (ENSCWAG00000009566) #18 MMP12 (ENSCWAG00000009480) #19 MMP13 (ENSCWAG00000009364) #20 DCUN1D5 (ENSCWAG00000009255) #21 DYNC2H1 (ENSCWAG00000007039) #22 DDI1 (ENSCWAG00000006891) #23 PDGFD (ENSCWAG00000006820) #24 ENSCWAG00000006786 ENSCWAG00000006740 #26 ENSCWAG00000006028 #28 GRIA4 (ENSCWAG00000005641) #32 MSANTD4 (ENSCWAG00000005595) #33 KBTBD3 (ENSCWAG00000005570) #34 AASDHPPT (ENSCWAG00000005548) #35 CWF19L2 (ENSCWAG00000005525) ALKBH8 (ENSCWAG00000005467) ELMOD1 (ENSCWAG00000005287) ENSCWAG00000005234 SLC35F2 (ENSCWAG00000005147) RAB39A (ENSCWAG00000005118) Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT01040000240879 Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719.a ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000155627 ENSGT00940000157765 #36 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT01040000240879 Cetacea ANCESTRAL SPECIES 4 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000155627 ENSGT00940000157765 #36 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 ENSGT00390000015655.a Odontoceti ANCESTRAL SPECIES 4 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000155627 ENSGT00940000157765 #36 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 ENSGT00390000015655.a Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000155627 ENSGT00940000157765 #36 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 ENSGT00390000015655.a Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00390000015164.v.a.a ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000155627 ENSGT00950000182878.b.b.k.a.a ENSGT00940000157765 #36 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 Monodontidae ANCESTRAL SPECIES 2 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00390000015164.v.a.a ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT01010000222906.b.b.b ENSGT00390000005568.fb.l.b.a ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000155627 ENSGT00950000182878.b.b.k.a.a ENSGT00940000157765 #36 ENSGT00940000158563 Beluga whale MODERN SPECIES 75 MMP20 (ENSDLEG00000012733) #13 MMP27 (ENSDLEG00000012775) #14 MMP8 (ENSDLEG00000012801) #15 MMP1 (ENSDLEG00000012823) #17 MMP3 (ENSDLEG00000012844) #18 MMP13 (ENSDLEG00000012870) #20 DCUN1D5 (ENSDLEG00000012915) #21 DYNC2H1 (ENSDLEG00000013026) #22 ENSDLEG00000014217 ENSDLEG00000014223 PDGFD (ENSDLEG00000014235) #24 DDI1 (ENSDLEG00000014267) #23 ENSDLEG00000014270 #25 ENSDLEG00000014313 #26 CASP1 (ENSDLEG00000014328) #28 GRIA4 (ENSDLEG00000014352) #32 MSANTD4 (ENSDLEG00000014424) #33 KBTBD3 (ENSDLEG00000014428) #34 AASDHPPT (ENSDLEG00000014433) #35 CWF19L2 (ENSDLEG00000014450) GUCY1A2 (ENSDLEG00000014519) #36 Narwhal MODERN SPECIES 314 BIRC3 (ENSMMNG00015017985) #9 BIRC2 (ENSMMNG00015017921) #10 ENSMMNG00015017889 TMEM123 (ENSMMNG00015017867) #11 MMP7 (ENSMMNG00015017833) #12 ENSMMNG00015017789 ENSMMNG00015017752 FOLH1 (ENSMMNG00015016426) MMP20 (ENSMMNG00015016079) #13 MMP27 (ENSMMNG00015016013) #14 MMP8 (ENSMMNG00015015954) #15 MMP1 (ENSMMNG00015015906) #17 MMP3 (ENSMMNG00015015864) #18 MMP13 (ENSMMNG00015015808) #20 DCUN1D5 (ENSMMNG00015015752) #21 DYNC2H1 (ENSMMNG00015015422) #22 ENSMMNG00015015371 DDI1 (ENSMMNG00015015358) #23 PDGFD (ENSMMNG00015015343) #24 CASP12 (ENSMMNG00015015330) #25 ENSMMNG00015015306 #26 ENSMMNG00015015191 #28 ENSMMNG00015015127 GRIA4 (ENSMMNG00015015040) #32 MSANTD4 (ENSMMNG00015014999) #33 KBTBD3 (ENSMMNG00015014990) #34 AASDHPPT (ENSMMNG00015014982) #35 CWF19L2 (ENSMMNG00015014936) ENSMMNG00015014920 GUCY1A2 (ENSMMNG00015014900) #36 ALKBH8 (ENSMMNG00015014868) Vaquita MODERN SPECIES 19 ENSPSNG00000012784 ENSPSNG00000012743 FOLH1 (ENSPSNG00000012683) ENSPSNG00000012601 ENSPSNG00000012185 ENSPSNG00000012055 ENSPSNG00000012017 MMP20 (ENSPSNG00000011898) #13 MMP27 (ENSPSNG00000011758) #14 MMP8 (ENSPSNG00000011640) #15 MMP1 (ENSPSNG00000011516) #17 MMP3 (ENSPSNG00000011464) #18 ENSPSNG00000011394 MMP13 (ENSPSNG00000011272) #20 DCUN1D5 (ENSPSNG00000011176) #21 ENSPSNG00000011129 #22 ENSPSNG00000011106 DDI1 (ENSPSNG00000011079) #23 PDGFD (ENSPSNG00000011015) #24 ENSPSNG00000010961 #25 ENSPSNG00000010712 #26 ENSPSNG00000010097 #28 ENSPSNG00000009923 ENSPSNG00000009900 GRIA4 (ENSPSNG00000009480) #32 MSANTD4 (ENSPSNG00000009351) #33 KBTBD3 (ENSPSNG00000009333) #34 AASDHPPT (ENSPSNG00000009261) #35 CWF19L2 (ENSPSNG00000009225) ENSPSNG00000009179 GUCY1A2 (ENSPSNG00000009108) #36 Dolphin MODERN SPECIES 2448 ENSTTRG00000009305 #22 Sperm whale MODERN SPECIES 7 CEP126 (ENSPCTG00005008482) CFAP300 (ENSPCTG00005008410) #7 YAP1 (ENSPCTG00005008267) #8 BIRC3 (ENSPCTG00005008131) #10 TMEM123 (ENSPCTG00005008095) #11 ENSPCTG00005008079 MMP7 (ENSPCTG00005008052) #12 ENSPCTG00005008033 MMP20 (ENSPCTG00005007995) #13 MMP27 (ENSPCTG00005007950) #14 MMP8 (ENSPCTG00005007904) #15 MMP1 (ENSPCTG00005007864) #17 MMP3 (ENSPCTG00005007829) #18 MMP13 (ENSPCTG00005007790) #20 DCUN1D5 (ENSPCTG00005007734) #21 DYNC2H1 (ENSPCTG00005007602) #22 DDI1 (ENSPCTG00005007507) #23 PDGFD (ENSPCTG00005007471) #24 ENSPCTG00005007398 #26 CASP1 (ENSPCTG00005006753) #28 ENSPCTG00005006571 GRIA4 (ENSPCTG00005006290) #32 MSANTD4 (ENSPCTG00005006230) #33 KBTBD3 (ENSPCTG00005006219) #34 AASDHPPT (ENSPCTG00005006202) #35 CWF19L2 (ENSPCTG00005006064) GUCY1A2 (ENSPCTG00005005964) #36 ENSPCTG00005005948 ALKBH8 (ENSPCTG00005005892) ELMOD1 (ENSPCTG00005005706) ENSPCTG00005005666 Blue whale MODERN SPECIES 19 CFAP300 (ENSBMSG00010007148) #7 YAP1 (ENSBMSG00010007087) #8 BIRC3 (ENSBMSG00010007044) #9 BIRC2 (ENSBMSG00010007026) #10 ENSBMSG00010006981 #11 MMP7 (ENSBMSG00010006965) #12 ENSBMSG00010006936 MMP20 (ENSBMSG00010006883) #13 MMP27 (ENSBMSG00010006850) #14 MMP8 (ENSBMSG00010006829) #15 MMP1 (ENSBMSG00010006797) #17 MMP3 (ENSBMSG00010006771) #18 MMP13 (ENSBMSG00010006744) #20 DCUN1D5 (ENSBMSG00010006711) #21 ENSBMSG00010006692 DYNC2H1 (ENSBMSG00010006610) #22 ENSBMSG00010006519 ENSBMSG00010006513 ENSBMSG00010006504 DDI1 (ENSBMSG00010006488) #23 PDGFD (ENSBMSG00010006472) #24 CASP12 (ENSBMSG00010006435) #25 ENSBMSG00010006394 #26 ENSBMSG00010006210 #28 ENSBMSG00010006162 ENSBMSG00010007668 MSANTD4 (ENSBMSG00010007664) #33 KBTBD3 (ENSBMSG00010007657) #34 AASDHPPT (ENSBMSG00010007644) #35 CWF19L2 (ENSBMSG00010007631) ENSBMSG00010007615 Pecora ANCESTRAL SPECIES 7 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719.a ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j Yarkand deer MODERN SPECIES YAP1 (ENSCHYG00000000950) #8 BIRC3 (ENSCHYG00000000926) #9 BIRC2 (ENSCHYG00000000902) #10 ENSCHYG00000000892 TMEM123 (ENSCHYG00000000870) #11 MMP7 (ENSCHYG00000000857) #12 MMP20 (ENSCHYG00000000837) #13 MMP27 (ENSCHYG00000000792) #14 MMP8 (ENSCHYG00000000770) #15 ENSCHYG00000000747 #17 MMP1 (ENSCHYG00000000723) #17 MMP3 (ENSCHYG00000000701) #18 MMP12 (ENSCHYG00000000688) #19 MMP13 (ENSCHYG00000000652) #20 DCUN1D5 (ENSCHYG00000000628) #21 DYNC2H1 (ENSCHYG00000000537) #22 DDI1 (ENSCHYG00000000457) #23 PDGFD (ENSCHYG00000000341) #24 ENSCHYG00000000233 ENSCHYG00000000211 #26 ENSCHYG00000000171 #28 ENSCHYG00000000131 GRIA4 (ENSCHYG00000000113) #32 MSANTD4 (ENSCHYG00000000065) #33 KBTBD3 (ENSCHYG00000000060) #34 ENSCHYG00000000056 #35 ANKRD49 (ENSCHYG00000000041) MRE11 (ENSCHYG00000000023) GPR83 (ENSCHYG00000000012) IZUMO1R (ENSCHYG00000000006) Percora_a ANCESTRAL SPECIES 6 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719.a ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j Siberian musk deer MODERN SPECIES 1172 YAP1 (ENSMMSG00000019446) #8 ENSMMSG00000020213 ENSMMSG00000020239 #9 ENSMMSG00000020291 #10 ENSMMSG00000020342 ENSMMSG00000020366 #11 MMP7 (ENSMMSG00000020500) #12 MMP20 (ENSMMSG00000020524) #13 MMP27 (ENSMMSG00000020593) #14 MMP8 (ENSMMSG00000020627) #15 MMP1 (ENSMMSG00000020664) #17 MMP3 (ENSMMSG00000020691) #18 MMP12 (ENSMMSG00000020713) #19 MMP13 (ENSMMSG00000020775) #20 DCUN1D5 (ENSMMSG00000020795) #21 DYNC2H1 (ENSMMSG00000020899) #22 ENSMMSG00000008190 ENSMMSG00000008228 ENSMMSG00000008237 PDGFD (ENSMMSG00000008276) #24 DDI1 (ENSMMSG00000008336) #23 ENSMMSG00000008366 #26 ENSMMSG00000008496 #28 GRIA4 (ENSMMSG00000008872) #32 ENSMMSG00000008975 #33 KBTBD3 (ENSMMSG00000009059) #34 AASDHPPT (ENSMMSG00000009083) #35 ANKRD49 (ENSMMSG00000009101) ENSMMSG00000009157 GPR83 (ENSMMSG00000009714) IZUMO1R (ENSMMSG00000009745) Bovidae ANCESTRAL SPECIES 6 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719.a ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000171276 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j ENSGT00940000154976.p.b.b ENSGT00940000154261.q.b.a.a Caprinae ANCESTRAL SPECIES 6 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000171276 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT01030000234886 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j ENSGT00940000154976.p.a Rambouillet Sheep MODERN SPECIES 6 TRPC6 (ENSOARG00020021734) ANGPTL5 (ENSOARG00020021669) CFAP300 (ENSOARG00020021370) #7 YAP1 (ENSOARG00020020483) #8 BIRC3 (ENSOARG00020020405) #9 ENSOARG00020020385 BIRC2 (ENSOARG00020020262) #10 MMP7 (ENSOARG00020020219) #12 MMP7 (ENSOARG00020020127) #12 MMP20 (ENSOARG00020020039) #13 MMP27 (ENSOARG00020020000) #14 MMP8 (ENSOARG00020019912) #15 MMP1 (ENSOARG00020019819) #17 MMP12 (ENSOARG00020019763) #19 DCUN1D5 (ENSOARG00020019585) #21 DYNC2H1 (ENSOARG00020014518) #22 DDI1 (ENSOARG00020014392) #23 PDGFD (ENSOARG00020014159) #24 ENSOARG00020014135 ENSOARG00020013177 #26 ENSOARG00020013115 ENSOARG00020013091 GRIA4 (ENSOARG00020012341) #32 MSANTD4 (ENSOARG00020012278) #33 KBTBD3 (ENSOARG00020012182) #34 AASDHPPT (ENSOARG00020012064) #35 ANKRD49 (ENSOARG00020012037) MRE11 (ENSOARG00020011913) GPR83 (ENSOARG00020011841) ENSOARG00020011815 OR4C16 (ENSOARG00020011729) Goat MODERN SPECIES 6 YAP1 (ENSCHIG00000017090) #8 ENSCHIG00000023994 ENSCHIG00000018499 BIRC3 (ENSCHIG00000012208) #9 BIRC2 (ENSCHIG00000017347) #10 ENSCHIG00000013361 #11 MMP7 (ENSCHIG00000026468) #12 MMP20 (ENSCHIG00000026359) #13 MMP27 (ENSCHIG00000012641) #14 MMP8 (ENSCHIG00000026968) #15 MMP1 (ENSCHIG00000010427) #17 MMP3 (ENSCHIG00000022679) #18 MMP12 (ENSCHIG00000026649) #19 MMP13 (ENSCHIG00000021039) #20 DCUN1D5 (ENSCHIG00000021271) #21 DYNC2H1 (ENSCHIG00000017543) #22 PDGFD (ENSCHIG00000006770) #24 DDI1 (ENSCHIG00000007991) #23 ENSCHIG00000008146 ENSCHIG00000023433 #26 ENSCHIG00000013458 #28 ENSCHIG00000020857 ENSCHIG00000009053 ENSCHIG00000019889 #32 ENSCHIG00000022465 #32 MSANTD4 (ENSCHIG00000021603) #33 ENSCHIG00000013896 #33 KBTBD3 (ENSCHIG00000012819) #34 AASDHPPT (ENSCHIG00000017726) #35 ANKRD49 (ENSCHIG00000015614) MRE11 (ENSCHIG00000021669) Bovinae ANCESTRAL SPECIES 21 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719.a ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000171276 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j ENSGT00940000158647.g.a.c ENSGT00900000141017.c.b.b Bos ANCESTRAL SPECIES 20 ENSGT01100000263481.n.a.b.a.b.a.b.a.b.a.a.a.b ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b.l #10 ENSGT00910000147719.a ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000163552.a.b.b.a ENSGT00940000171276 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415.f #34 ENSGT00390000004663.k #35 ENSGT00390000004663.l #35 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j Bos_a ANCESTRAL SPECIES 15 ENSGT01100000263481.n.a.b.a.b.a.b.a.b.a.a.a.b ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b.l #10 ENSGT00910000147719.a ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000163552.a.b.b.a ENSGT00940000171276 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415.f #34 ENSGT00390000004663.k #35 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d Domestic yak MODERN SPECIES 4 ENSBGRG00000016649 BIRC3 (ENSBGRG00000016714) #9 ENSBGRG00000016826 #10 ENSBGRG00000017104 ENSBGRG00000017169 #11 MMP7 (ENSBGRG00000017747) #12 MMP20 (ENSBGRG00000017827) #13 MMP27 (ENSBGRG00000017957) #14 MMP8 (ENSBGRG00000018057) #15 ENSBGRG00000018167 #17 MMP1 (ENSBGRG00000018480) #17 MMP3 (ENSBGRG00000018711) #18 MMP12 (ENSBGRG00000018771) #19 MMP13 (ENSBGRG00000018832) #20 DCUN1D5 (ENSBGRG00000018907) #21 DYNC2H1 (ENSBGRG00000019097) #22 ENSBGRG00000020346 PDGFD (ENSBGRG00000020375) #24 DDI1 (ENSBGRG00000020479) #23 ENSBGRG00000020487 ENSBGRG00000020511 ENSBGRG00000020533 #26 ENSBGRG00000020667 #28 GRIA4 (ENSBGRG00000020983) #32 MSANTD4 (ENSBGRG00000021125) #33 KBTBD3 (ENSBGRG00000021150) #34 ENSBGRG00000021208 #35 ANKRD49 (ENSBGRG00000021288) MRE11 (ENSBGRG00000021342) IZUMO1R (ENSBGRG00000021756) ENSBGRG00000021894 Wild yak MODERN SPECIES 115 DCUN1D5 (ENSBMUG00000011697) #21 DYNC2H1 (ENSBMUG00000012095) #22 CDH6 (ENSBMUG00000012474) DROSHA (ENSBMUG00000012602) C5orf22 (ENSBMUG00000012660) ENSBMUG00000012666 ENSBMUG00000012684 PDZD2 (ENSBMUG00000012698) ENSBMUG00000012710 MTMR12 (ENSBMUG00000012798) ENSBMUG00000012835 ENSBMUG00000012841 Bos_b ANCESTRAL SPECIES 19 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b.l.a #10 ENSGT00910000147719.a ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b.kb #17 ENSGT00940000154907.b.lb #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000163552.a.b.b.a ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000174020.a.b ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415.f #34 ENSGT00390000004663.k #35 ENSGT00390000004663.l #35 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j Cow DUPLICATION Cow DUPLICATION Cow MODERN SPECIES 6 BIRC3 (ENSBTAG00000024918) #9 BIRC2 (ENSBTAG00000035735) #10 ENSBTAG00000052956 ENSBTAG00000049233 #11 MMP7 (ENSBTAG00000004594) #12 MMP20 (ENSBTAG00000014251) #13 MMP27 (ENSBTAG00000040567) #14 MMP8 (ENSBTAG00000046732) #15 ENSBTAG00000015818 #17 MMP1 (ENSBTAG00000048029) #17 MMP3 (ENSBTAG00000037768) #18 MMP12 (ENSBTAG00000053542) #19 MMP13 (ENSBTAG00000015059) #20 ENSBTAG00000050505 DCUN1D5 (ENSBTAG00000003087) #21 ENSBTAG00000019309 #22 ENSBTAG00000048939 #22 ENSBTAG00000047461 #22 ENSBTAG00000051741 ENSBTAG00000049312 DDI1 (ENSBTAG00000002887) #23 PDGFD (ENSBTAG00000034827) #24 ENSBTAG00000052675 ENSBTAG00000051613 ENSBTAG00000053811 CASP4 (ENSBTAG00000020884) #26 CASP1 (ENSBTAG00000050239) #28 ENSBTAG00000055258 GRIA4 (ENSBTAG00000006176) #32 MSANTD4 (ENSBTAG00000023989) #33 KBTBD3 (ENSBTAG00000005392) #34 Cow MODERN SPECIES 6 ENSBTAG00000052956 ENSBTAG00000049233 #11 MMP7 (ENSBTAG00000004594) #12 MMP20 (ENSBTAG00000014251) #13 MMP27 (ENSBTAG00000040567) #14 MMP8 (ENSBTAG00000046732) #15 ENSBTAG00000015818 #17 MMP1 (ENSBTAG00000048029) #17 MMP3 (ENSBTAG00000037768) #18 MMP12 (ENSBTAG00000053542) #19 MMP13 (ENSBTAG00000015059) #20 ENSBTAG00000050505 DCUN1D5 (ENSBTAG00000003087) #21 ENSBTAG00000019309 #22 ENSBTAG00000048939 #22 ENSBTAG00000047461 #22 ENSBTAG00000051741 ENSBTAG00000049312 DDI1 (ENSBTAG00000002887) #23 PDGFD (ENSBTAG00000034827) #24 ENSBTAG00000052675 ENSBTAG00000051613 ENSBTAG00000053811 CASP4 (ENSBTAG00000020884) #26 CASP1 (ENSBTAG00000050239) #28 ENSBTAG00000055258 GRIA4 (ENSBTAG00000006176) #32 MSANTD4 (ENSBTAG00000023989) #33 KBTBD3 (ENSBTAG00000005392) #34 AASDHPPT (ENSBTAG00000012279) #35 ANKRD49 (ENSBTAG00000009176) Cow MODERN SPECIES 6 BIRC2 (ENSBTAG00000035735) #10 ENSBTAG00000052956 ENSBTAG00000049233 #11 MMP7 (ENSBTAG00000004594) #12 MMP20 (ENSBTAG00000014251) #13 MMP27 (ENSBTAG00000040567) #14 MMP8 (ENSBTAG00000046732) #15 ENSBTAG00000015818 #17 MMP1 (ENSBTAG00000048029) #17 MMP3 (ENSBTAG00000037768) #18 MMP12 (ENSBTAG00000053542) #19 MMP13 (ENSBTAG00000015059) #20 ENSBTAG00000050505 DCUN1D5 (ENSBTAG00000003087) #21 ENSBTAG00000019309 #22 ENSBTAG00000048939 #22 ENSBTAG00000047461 #22 ENSBTAG00000051741 ENSBTAG00000049312 DDI1 (ENSBTAG00000002887) #23 PDGFD (ENSBTAG00000034827) #24 ENSBTAG00000052675 ENSBTAG00000051613 ENSBTAG00000053811 CASP4 (ENSBTAG00000020884) #26 CASP1 (ENSBTAG00000050239) #28 ENSBTAG00000055258 GRIA4 (ENSBTAG00000006176) #32 MSANTD4 (ENSBTAG00000023989) #33 KBTBD3 (ENSBTAG00000005392) #34 AASDHPPT (ENSBTAG00000012279) #35 Hybrid Bos Indicus MODERN SPECIES 6 BIRC3 (ENSBIXG00005002521) #9 ENSBIXG00005015904 #10 ENSBIXG00005015835 ENSBIXG00005015827 #11 MMP7 (ENSBIXG00005015796) #12 MMP20 (ENSBIXG00005015765) #13 MMP27 (ENSBIXG00005007505) #14 MMP8 (ENSBIXG00005015697) #15 ENSBIXG00005015654 #17 ENSBIXG00005002351 #17 MMP3 (ENSBIXG00005015577) #18 MMP12 (ENSBIXG00005015572) #19 MMP13 (ENSBIXG00005015552) #20 ENSBIXG00005007135 DCUN1D5 (ENSBIXG00005015519) #21 DYNC2H1 (ENSBIXG00005006562) #22 PDGFD (ENSBIXG00005015295) #24 DDI1 (ENSBIXG00005015259) #23 ENSBIXG00005005639 ENSBIXG00005015227 #26 ENSBIXG00005015170 #28 ENSBIXG00005002205 ENSBIXG00005015044 GRIA4 (ENSBIXG00005014996) #32 MSANTD4 (ENSBIXG00005014916) #33 KBTBD3 (ENSBIXG00005014892) #34 AASDHPPT (ENSBIXG00005014858) #35 ENSBIXG00005014848 ANKRD49 (ENSBIXG00005014841) MRE11 (ENSBIXG00005014792) ENSBIXG00005014538 American bison MODERN SPECIES 3035 MMP1 (ENSBBBG00000005557) #17 MMP3 (ENSBBBG00000008782) #18 MMP12 (ENSBBBG00000020578) #19 MMP13 (ENSBBBG00000020565) #20 DCUN1D5 (ENSBBBG00000007470) #21 DYNC2H1 (ENSBBBG00000020480) #22 PDGFD (ENSBBBG00000007015) #24 DDI1 (ENSBBBG00000005435) #23 Camelidae DUPLICATION Camelidae ANCESTRAL SPECIES ENSGT00940000154620.lb #22 Arabian camel DUPLICATION Arabian camel MODERN SPECIES 174 ENSCDRG00005011135 #22 Arabian camel MODERN SPECIES 186 ENSCDRG00005007557 #22 Camelidae ANCESTRAL SPECIES 32 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620.mb #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 Arabian camel MODERN SPECIES 1 CFAP300 (ENSCDRG00005001024) #7 YAP1 (ENSCDRG00005001090) #8 BIRC3 (ENSCDRG00005001220) #9 BIRC2 (ENSCDRG00005001258) #10 ENSCDRG00005001278 ENSCDRG00005001282 #11 MMP7 (ENSCDRG00005001294) #12 MMP20 (ENSCDRG00005001309) #13 MMP27 (ENSCDRG00005001340) #14 MMP8 (ENSCDRG00005001367) #15 MMP1 (ENSCDRG00005001400) #17 MMP3 (ENSCDRG00005001425) #18 MMP12 (ENSCDRG00005001447) #19 MMP13 (ENSCDRG00005001466) #20 DCUN1D5 (ENSCDRG00005001503) #21 DYNC2H1 (ENSCDRG00005001586) #22 PDGFD (ENSCDRG00005001697) #24 DDI1 (ENSCDRG00005001731) #23 ENSCDRG00005001740 #26 ENSCDRG00005001784 #28 GRIA4 (ENSCDRG00005001949) #32 MSANTD4 (ENSCDRG00005002065) #33 KBTBD3 (ENSCDRG00005002074) #34 AASDHPPT (ENSCDRG00005002082) #35 ENSCDRG00005002094 Alpaca MODERN SPECIES 659 DCUN1D5 (ENSVPAG00000011347) #21 ENSVPAG00000011348 #22 Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000162428.b ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00390000008536 Laurasiatheria_c ANCESTRAL SPECIES 23 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000162428.b ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 ENSGT00940000159782 Chiroptera ANCESTRAL SPECIES 33 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000162428.b ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000015352.n ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 Microchiroptera ANCESTRAL SPECIES 34 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00910000147719 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000162428.b ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000015352.n ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 Greater horseshoe bat MODERN SPECIES 2 BIRC2 (ENSRFEG00010006459) #10 ENSRFEG00010006526 ENSRFEG00010006546 #11 ENSRFEG00010006590 MMP7 (ENSRFEG00010006603) #12 MMP20 (ENSRFEG00010006633) #13 MMP27 (ENSRFEG00010006694) #14 MMP8 (ENSRFEG00010006863) #15 MMP10 (ENSRFEG00010007505) #16 MMP1 (ENSRFEG00010007604) #17 MMP3 (ENSRFEG00010007645) #18 MMP12 (ENSRFEG00010007757) #19 ENSRFEG00010007869 MMP13 (ENSRFEG00010007911) #20 DCUN1D5 (ENSRFEG00010008035) #21 DYNC2H1 (ENSRFEG00010008170) #22 ENSRFEG00010008309 PDGFD (ENSRFEG00010008344) #24 ENSRFEG00010008414 DDI1 (ENSRFEG00010008434) #23 ENSRFEG00010008449 ENSRFEG00010008486 #25 ENSRFEG00010008552 #26 ENSRFEG00010008674 #28 ENSRFEG00010008776 ENSRFEG00010008796 GRIA4 (ENSRFEG00010008848) #32 MSANTD4 (ENSRFEG00010008997) #33 KBTBD3 (ENSRFEG00010009026) #34 AASDHPPT (ENSRFEG00010009049) #35 ENSRFEG00010009091 Microbat MODERN SPECIES 1054 PIH1D2 (ENSMLUG00000012219) NKAPD1 (ENSMLUG00000024705) TIMM8B (ENSMLUG00000012225) SDHD (ENSMLUG00000012228) ENSMLUG00000027380 TEX12 (ENSMLUG00000017694) BCO2 (ENSMLUG00000017695) PTS (ENSMLUG00000023388) ENSMLUG00000009366 ENSMLUG00000027294 NCAM1 (ENSMLUG00000011838) TTC12 (ENSMLUG00000011854) ANKK1 (ENSMLUG00000011881) DRD2 (ENSMLUG00000011890) ZW10 (ENSMLUG00000014203) DYNC2H1 (ENSMLUG00000003216) #22 PDGFD (ENSMLUG00000011003) #24 DDI1 (ENSMLUG00000014443) #23 Megabat MODERN SPECIES 2900 ENSPVAG00000007495 #22 Equus ANCESTRAL SPECIES 25 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000162555 #25 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 Donkey DUPLICATION Donkey DUPLICATION Donkey MODERN SPECIES 12 CEP126 (ENSEASG00005011151) CFAP300 (ENSEASG00005031746) #7 YAP1 (ENSEASG00005011146) #8 BIRC3 (ENSEASG00005011145) #9 BIRC2 (ENSEASG00005011141) #10 TMEM123 (ENSEASG00005011137) #11 MMP7 (ENSEASG00005011134) #12 MMP20 (ENSEASG00005011128) #13 MMP27 (ENSEASG00005011124) #14 MMP8 (ENSEASG00005011052) #15 MMP1 (ENSEASG00005011048) #17 MMP3 (ENSEASG00005011047) #18 MMP12 (ENSEASG00005011046) #19 MMP13 (ENSEASG00005011044) #20 ENSEASG00005011043 #21 ENSEASG00005011042 #22 ENSEASG00005030689 #22 ENSEASG00005011036 #22 DDI1 (ENSEASG00005011033) #23 PDGFD (ENSEASG00005011032) #24 ENSEASG00005011031 #25 ENSEASG00005011030 #26 ENSEASG00005011029 #28 ENSEASG00005026662 #25 ENSEASG00005011027 GRIA4 (ENSEASG00005011024) #32 MSANTD4 (ENSEASG00005011020) #33 KBTBD3 (ENSEASG00005011019) #34 AASDHPPT (ENSEASG00005011016) #35 GUCY1A2 (ENSEASG00005011012) #36 CWF19L2 (ENSEASG00005011011) Donkey MODERN SPECIES 12 YAP1 (ENSEASG00005011146) #8 BIRC3 (ENSEASG00005011145) #9 BIRC2 (ENSEASG00005011141) #10 TMEM123 (ENSEASG00005011137) #11 MMP7 (ENSEASG00005011134) #12 MMP20 (ENSEASG00005011128) #13 MMP27 (ENSEASG00005011124) #14 MMP8 (ENSEASG00005011052) #15 MMP1 (ENSEASG00005011048) #17 MMP3 (ENSEASG00005011047) #18 MMP12 (ENSEASG00005011046) #19 MMP13 (ENSEASG00005011044) #20 ENSEASG00005011043 #21 ENSEASG00005011042 #22 ENSEASG00005030689 #22 ENSEASG00005011036 #22 DDI1 (ENSEASG00005011033) #23 PDGFD (ENSEASG00005011032) #24 ENSEASG00005011031 #25 ENSEASG00005011030 #26 ENSEASG00005011029 #28 ENSEASG00005026662 #25 ENSEASG00005011027 GRIA4 (ENSEASG00005011024) #32 MSANTD4 (ENSEASG00005011020) #33 KBTBD3 (ENSEASG00005011019) #34 AASDHPPT (ENSEASG00005011016) #35 GUCY1A2 (ENSEASG00005011012) #36 CWF19L2 (ENSEASG00005011011) ALKBH8 (ENSEASG00005011010) ELMOD1 (ENSEASG00005011008) Donkey MODERN SPECIES 12 CFAP300 (ENSEASG00005031746) #7 YAP1 (ENSEASG00005011146) #8 BIRC3 (ENSEASG00005011145) #9 BIRC2 (ENSEASG00005011141) #10 TMEM123 (ENSEASG00005011137) #11 MMP7 (ENSEASG00005011134) #12 MMP20 (ENSEASG00005011128) #13 MMP27 (ENSEASG00005011124) #14 MMP8 (ENSEASG00005011052) #15 MMP1 (ENSEASG00005011048) #17 MMP3 (ENSEASG00005011047) #18 MMP12 (ENSEASG00005011046) #19 MMP13 (ENSEASG00005011044) #20 ENSEASG00005011043 #21 ENSEASG00005011042 #22 ENSEASG00005030689 #22 ENSEASG00005011036 #22 DDI1 (ENSEASG00005011033) #23 PDGFD (ENSEASG00005011032) #24 ENSEASG00005011031 #25 ENSEASG00005011030 #26 ENSEASG00005011029 #28 ENSEASG00005026662 #25 ENSEASG00005011027 GRIA4 (ENSEASG00005011024) #32 MSANTD4 (ENSEASG00005011020) #33 KBTBD3 (ENSEASG00005011019) #34 AASDHPPT (ENSEASG00005011016) #35 GUCY1A2 (ENSEASG00005011012) #36 CWF19L2 (ENSEASG00005011011) ALKBH8 (ENSEASG00005011010) Horse MODERN SPECIES 28 YAP1 (ENSECAG00000008660) #8 ENSECAG00000054274 BIRC3 (ENSECAG00000047232) #9 BIRC3 (ENSECAG00000012229) #10 TMEM123 (ENSECAG00000033952) #11 MMP7 (ENSECAG00000021262) #12 MMP20 (ENSECAG00000011739) #13 MMP27 (ENSECAG00000019404) #14 MMP8 (ENSECAG00000044786) #15 MMP1 (ENSECAG00000046821) #17 MMP12 (ENSECAG00000019445) #18 MMP12 (ENSECAG00000056462) #19 MMP13 (ENSECAG00000005506) #20 ENSECAG00000038696 DCUN1D5 (ENSECAG00000005717) #21 DYNC2H1 (ENSECAG00000016257) #22 PDGFD (ENSECAG00000024746) #24 DDI1 (ENSECAG00000005520) #23 ENSECAG00000008723 #25 ENSECAG00000012876 #26 CASP1 (ENSECAG00000024367) #28 ENSECAG00000027719 #25 GRIA4 (ENSECAG00000009916) #32 MSANTD4 (ENSECAG00000011320) #33 KBTBD3 (ENSECAG00000012801) #34 AASDHPPT (ENSECAG00000013032) #35 GUCY1A2 (ENSECAG00000018191) #36 CWF19L2 (ENSECAG00000004314) ALKBH8 (ENSECAG00000019425) ELMOD1 (ENSECAG00000010926) SLC35F2 (ENSECAG00000019266) Carnivora ANCESTRAL SPECIES 21 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01090000260451 ENSGT00390000015655.a Felidae ANCESTRAL SPECIES ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000015352.o.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01090000260451 ENSGT00390000015655.a Panthera ANCESTRAL SPECIES 26 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000015352.o.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01090000260451 ENSGT00390000015655.a Panthera_a ANCESTRAL SPECIES 29 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00390000015352.o.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01090000260451 ENSGT00390000015655.a lion MODERN SPECIES 10 CEP126 (ENSPLOG00000017379) YAP1 (ENSPLOG00000017584) #8 BIRC3 (ENSPLOG00000018022) #9 BIRC2 (ENSPLOG00000018052) #10 TMEM123 (ENSPLOG00000018213) #11 MMP7 (ENSPLOG00000018223) #12 MMP20 (ENSPLOG00000018280) #13 MMP27 (ENSPLOG00000018359) #14 MMP8 (ENSPLOG00000018450) #15 ENSPLOG00000018488 #17 MMP1 (ENSPLOG00000018733) #17 MMP3 (ENSPLOG00000018808) #18 MMP12 (ENSPLOG00000018889) #19 MMP13 (ENSPLOG00000018961) #20 ENSPLOG00000019032 #21 DYNC2H1 (ENSPLOG00000019300) #22 PDGFD (ENSPLOG00000020532) #24 DDI1 (ENSPLOG00000020565) #23 ENSPLOG00000020643 #25 ENSPLOG00000020689 #26 GRIA4 (ENSPLOG00000020766) #32 MSANTD4 (ENSPLOG00000021006) #33 KBTBD3 (ENSPLOG00000021027) #34 AASDHPPT (ENSPLOG00000021049) #35 GUCY1A2 (ENSPLOG00000021082) #36 ENSPLOG00000021113 CWF19L2 (ENSPLOG00000021204) ALKBH8 (ENSPLOG00000021289) ELMOD1 (ENSPLOG00000021429) ENSPLOG00000021511 SLC35F2 (ENSPLOG00000021519) leopard MODERN SPECIES 155 YAP1 (ENSPPRG00000017793) #8 BIRC3 (ENSPPRG00000017639) #9 BIRC2 (ENSPPRG00000015656) #10 ENSPPRG00000015061 #11 MMP7 (ENSPPRG00000014613) #12 MMP20 (ENSPPRG00000014290) #13 MMP27 (ENSPPRG00000013916) #14 MMP8 (ENSPPRG00000013466) #15 ENSPPRG00000013409 #17 ENSPPRG00000012489 #18 MMP1 (ENSPPRG00000012447) #17 ENSPPRG00000012357 #18 MMP12 (ENSPPRG00000012183) #19 MMP13 (ENSPPRG00000012080) #20 DCUN1D5 (ENSPPRG00000011374) #21 DYNC2H1 (ENSPPRG00000008878) #22 PDGFD (ENSPPRG00000005408) #24 Tiger MODERN SPECIES 74 CFAP300 (ENSPTIG00000009894) #7 YAP1 (ENSPTIG00000009822) #8 BIRC3 (ENSPTIG00000009589) #9 BIRC2 (ENSPTIG00000009197) #10 ENSPTIG00000008991 #11 MMP7 (ENSPTIG00000008931) #12 MMP20 (ENSPTIG00000008810) #13 MMP27 (ENSPTIG00000008671) #14 MMP8 (ENSPTIG00000008615) #15 MMP10 (ENSPTIG00000008445) #16 MMP1 (ENSPTIG00000008353) #17 MMP3 (ENSPTIG00000008284) #18 MMP12 (ENSPTIG00000008238) #19 MMP13 (ENSPTIG00000008043) #20 DCUN1D5 (ENSPTIG00000007744) #21 DYNC2H1 (ENSPTIG00000005732) #22 PDGFD (ENSPTIG00000005484) #24 ENSPTIG00000005234 #25 ENSPTIG00000003345 #26 GRIA4 (ENSPTIG00000000010) #32 MSANTD4 (ENSPTIG00000020029) #33 KBTBD3 (ENSPTIG00000019990) #34 AASDHPPT (ENSPTIG00000019943) #35 Cat MODERN SPECIES 241 YAP1 (ENSFCAG00000035050) #8 BIRC3 (ENSFCAG00000041774) #9 TMEM123 (ENSFCAG00000041930) #11 MMP7 (ENSFCAG00000015787) #12 MMP20 (ENSFCAG00000015788) #13 MMP27 (ENSFCAG00000015789) #14 MMP8 (ENSFCAG00000015790) #15 ENSFCAG00000047451 #17 MMP10 (ENSFCAG00000015796) #16 MMP1 (ENSFCAG00000015791) #17 MMP3 (ENSFCAG00000015792) #18 MMP12 (ENSFCAG00000010982) #19 MMP13 (ENSFCAG00000000118) #20 ENSFCAG00000049048 DCUN1D5 (ENSFCAG00000037795) #21 DYNC2H1 (ENSFCAG00000028573) #22 PDGFD (ENSFCAG00000024385) #24 DDI1 (ENSFCAG00000043639) #23 CASP12 (ENSFCAG00000005920) #25 CASP4 (ENSFCAG00000005921) #26 ENSFCAG00000037829 GRIA4 (ENSFCAG00000015605) #32 MSANTD4 (ENSFCAG00000042108) #33 KBTBD3 (ENSFCAG00000015606) #34 AASDHPPT (ENSFCAG00000031934) #35 ENSFCAG00000033787 ENSFCAG00000042411 GUCY1A2 (ENSFCAG00000038721) #36 ENSFCAG00000034545 CWF19L2 (ENSFCAG00000045471) ALKBH8 (ENSFCAG00000033583) Caniformia ANCESTRAL SPECIES 17 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000264760 ENSGT00390000015655.a Caniformia_b ANCESTRAL SPECIES 3 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000159759.e.a #18 ENSGT00940000154907.b #17 ENSGT00940000159759.e.b #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000264760 ENSGT00390000015655.a Ursidae ANCESTRAL SPECIES 15 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759.e.a #18 ENSGT00940000159759.e.b #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000264760 ENSGT00390000015655.a ENSGT00940000159933 Ursus ANCESTRAL SPECIES 340 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 Polar bear DUPLICATION Polar bear DUPLICATION Polar bear MODERN SPECIES 166 BIRC2 (ENSUMAG00000009270) #10 ENSUMAG00000009266 #11 MMP7 (ENSUMAG00000009262) #12 MMP20 (ENSUMAG00000009249) #13 MMP27 (ENSUMAG00000009207) #14 MMP8 (ENSUMAG00000009197) #15 ENSUMAG00000009165 #17 ENSUMAG00000009160 #18 MMP1 (ENSUMAG00000009155) #17 ENSUMAG00000009143 #18 MMP12 (ENSUMAG00000009133) #19 MMP13 (ENSUMAG00000009113) #20 DCUN1D5 (ENSUMAG00000009107) #21 ENSUMAG00000009090 #22 ENSUMAG00000009073 #22 ENSUMAG00000009046 #22 DDI1 (ENSUMAG00000009040) #23 PDGFD (ENSUMAG00000009038) #24 ENSUMAG00000009027 #25 ENSUMAG00000009022 #26 GRIA4 (ENSUMAG00000008904) #32 MSANTD4 (ENSUMAG00000008883) #33 KBTBD3 (ENSUMAG00000008879) #34 AASDHPPT (ENSUMAG00000008871) #35 ENSUMAG00000008866 GUCY1A2 (ENSUMAG00000008864) #36 CWF19L2 (ENSUMAG00000008758) ALKBH8 (ENSUMAG00000008743) ELMOD1 (ENSUMAG00000008718) SLC35F2 (ENSUMAG00000008709) ENSUMAG00000008701 Polar bear MODERN SPECIES 166 BIRC3 (ENSUMAG00000009275) #9 BIRC2 (ENSUMAG00000009270) #10 ENSUMAG00000009266 #11 MMP7 (ENSUMAG00000009262) #12 MMP20 (ENSUMAG00000009249) #13 MMP27 (ENSUMAG00000009207) #14 MMP8 (ENSUMAG00000009197) #15 ENSUMAG00000009165 #17 ENSUMAG00000009160 #18 MMP1 (ENSUMAG00000009155) #17 ENSUMAG00000009143 #18 MMP12 (ENSUMAG00000009133) #19 MMP13 (ENSUMAG00000009113) #20 DCUN1D5 (ENSUMAG00000009107) #21 ENSUMAG00000009090 #22 ENSUMAG00000009073 #22 ENSUMAG00000009046 #22 DDI1 (ENSUMAG00000009040) #23 PDGFD (ENSUMAG00000009038) #24 ENSUMAG00000009027 #25 ENSUMAG00000009022 #26 GRIA4 (ENSUMAG00000008904) #32 MSANTD4 (ENSUMAG00000008883) #33 KBTBD3 (ENSUMAG00000008879) #34 AASDHPPT (ENSUMAG00000008871) #35 ENSUMAG00000008866 GUCY1A2 (ENSUMAG00000008864) #36 CWF19L2 (ENSUMAG00000008758) ALKBH8 (ENSUMAG00000008743) ELMOD1 (ENSUMAG00000008718) SLC35F2 (ENSUMAG00000008709) Polar bear MODERN SPECIES 166 YAP1 (ENSUMAG00000009288) #8 BIRC3 (ENSUMAG00000009275) #9 BIRC2 (ENSUMAG00000009270) #10 ENSUMAG00000009266 #11 MMP7 (ENSUMAG00000009262) #12 MMP20 (ENSUMAG00000009249) #13 MMP27 (ENSUMAG00000009207) #14 MMP8 (ENSUMAG00000009197) #15 ENSUMAG00000009165 #17 ENSUMAG00000009160 #18 MMP1 (ENSUMAG00000009155) #17 ENSUMAG00000009143 #18 MMP12 (ENSUMAG00000009133) #19 MMP13 (ENSUMAG00000009113) #20 DCUN1D5 (ENSUMAG00000009107) #21 ENSUMAG00000009090 #22 ENSUMAG00000009073 #22 ENSUMAG00000009046 #22 DDI1 (ENSUMAG00000009040) #23 PDGFD (ENSUMAG00000009038) #24 ENSUMAG00000009027 #25 ENSUMAG00000009022 #26 GRIA4 (ENSUMAG00000008904) #32 MSANTD4 (ENSUMAG00000008883) #33 KBTBD3 (ENSUMAG00000008879) #34 AASDHPPT (ENSUMAG00000008871) #35 ENSUMAG00000008866 GUCY1A2 (ENSUMAG00000008864) #36 CWF19L2 (ENSUMAG00000008758) ALKBH8 (ENSUMAG00000008743) ELMOD1 (ENSUMAG00000008718) American black bear DUPLICATION American black bear MODERN SPECIES 57 ENSUAMG00000013278 #22 ENSUAMG00000013276 #22 PDGFD (ENSUAMG00000013271) #24 DDI1 (ENSUAMG00000013270) #23 American black bear MODERN SPECIES 57 ENSUAMG00000013278 #22 ENSUAMG00000013276 #22 PDGFD (ENSUAMG00000013271) #24 DDI1 (ENSUAMG00000013270) #23 Giant Panda MODERN SPECIES 18 CFAP300 (ENSAMEG00000009990) #7 YAP1 (ENSAMEG00000010001) #8 BIRC2 (ENSAMEG00000010031) #10 TMEM123 (ENSAMEG00000010067) #11 MMP7 (ENSAMEG00000010068) #12 MMP20 (ENSAMEG00000010079) #13 MMP27 (ENSAMEG00000010096) #14 MMP8 (ENSAMEG00000010107) #15 ENSAMEG00000028774 #17 ENSAMEG00000010164 #18 MMP1 (ENSAMEG00000010172) #17 ENSAMEG00000010203 #18 MMP12 (ENSAMEG00000010243) #19 MMP13 (ENSAMEG00000010270) #20 DCUN1D5 (ENSAMEG00000010318) #21 DYNC2H1 (ENSAMEG00000010320) #22 PDGFD (ENSAMEG00000013560) #24 DDI1 (ENSAMEG00000019134) #23 ENSAMEG00000000511 #25 ENSAMEG00000000467 #26 ENSAMEG00000000390 #32 ENSAMEG00000000384 #33 KBTBD3 (ENSAMEG00000000382) #34 AASDHPPT (ENSAMEG00000000370) #35 GUCY1A2 (ENSAMEG00000014522) #36 ENSAMEG00000019460 CWF19L2 (ENSAMEG00000015500) ALKBH8 (ENSAMEG00000002177) ELMOD1 (ENSAMEG00000002195) ENSAMEG00000019353 SLC35F2 (ENSAMEG00000002230) Mustelinae ANCESTRAL SPECIES 111 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000159759.e.a #18 ENSGT00940000154907.b #17 ENSGT00940000159759.e.b #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000264760 ENSGT00390000015655.a American mink MODERN SPECIES 178 ENSNVIG00000021606 BIRC3 (ENSNVIG00000021612) #9 BIRC2 (ENSNVIG00000021650) #10 ENSNVIG00000021676 #11 ENSNVIG00000021687 MMP20 (ENSNVIG00000021713) #13 MMP27 (ENSNVIG00000021721) #14 MMP8 (ENSNVIG00000021739) #15 ENSNVIG00000021764 #17 ENSNVIG00000021891 #18 MMP1 (ENSNVIG00000021897) #17 ENSNVIG00000021908 #18 MMP12 (ENSNVIG00000021917) #19 MMP13 (ENSNVIG00000021947) #20 DCNL5 (ENSNVIG00000021961) #21 DYNC2H1 (ENSNVIG00000022015) #22 PDGFD (ENSNVIG00000022429) #24 DDI1 (ENSNVIG00000022449) #23 CASP12 (ENSNVIG00000022452) #25 ENSNVIG00000022460 #26 ENSNVIG00000022469 #28 GRIA4 (ENSNVIG00000022497) #32 MSANTD4 (ENSNVIG00000022573) #33 KBTBD3 (ENSNVIG00000022585) #34 AASDHPPT (ENSNVIG00000022596) #35 Ferret MODERN SPECIES 268 YAP1 (ENSMPUG00000007208) #8 BIRC3 (ENSMPUG00000007197) #9 BIRC2 (ENSMPUG00000007189) #10 ENSMPUG00000007177 #11 MMP7 (ENSMPUG00000007166) #12 MMP20 (ENSMPUG00000007153) #13 MMP27 (ENSMPUG00000007119) #14 MMP8 (ENSMPUG00000006884) #15 ENSMPUG00000006878 #18 MMP1 (ENSMPUG00000006871) #17 ENSMPUG00000006864 #18 MMP12 (ENSMPUG00000006848) #19 MMP13 (ENSMPUG00000006840) #20 ENSMPUG00000006838 DCUN1D5 (ENSMPUG00000006833) #21 DYNC2H1 (ENSMPUG00000006434) #22 ENSMPUG00000006430 DDI1 (ENSMPUG00000006425) #23 PDGFD (ENSMPUG00000006416) #24 ENSMPUG00000006357 #25 ENSMPUG00000006341 GRIA4 (ENSMPUG00000006324) #32 MSANTD4 (ENSMPUG00000006316) #33 KBTBD3 (ENSMPUG00000006307) #34 AASDHPPT (ENSMPUG00000006273) #35 ENSMPUG00000006266 GUCY1A2 (ENSMPUG00000006254) #36 CWF19L2 (ENSMPUG00000006145) ALKBH8 (ENSMPUG00000006077) ELMOD1 (ENSMPUG00000006069) ENSMPUG00000020160 Canidae ANCESTRAL SPECIES 27 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000155677.b #32 ENSGT00950000186014 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00390000017443.g.a.a ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000163894 ENSGT00940000159782 Red fox MODERN SPECIES 61 CFAP300 (ENSVVUG00000010540) #7 YAP1 (ENSVVUG00000010559) #8 BIRC3 (ENSVVUG00000010573) #9 BIRC2 (ENSVVUG00000010579) #10 ENSVVUG00000010721 #11 ENSVVUG00000010725 MMP7 (ENSVVUG00000010731) #12 MMP20 (ENSVVUG00000010743) #13 MMP27 (ENSVVUG00000010759) #14 MMP8 (ENSVVUG00000010844) #15 MMP1 (ENSVVUG00000011949) #17 MMP3 (ENSVVUG00000011962) #18 MMP12 (ENSVVUG00000011970) #19 MMP13 (ENSVVUG00000011996) #20 ENSVVUG00000012007 #21 DYNC2H1 (ENSVVUG00000012126) #22 PDGFD (ENSVVUG00000013885) #24 DDI1 (ENSVVUG00000013892) #23 ENSVVUG00000013893 ENSVVUG00000013912 CASP12 (ENSVVUG00000013915) #25 ENSVVUG00000013918 ENSVVUG00000013932 GRIA4 (ENSVVUG00000013946) #32 ENSVVUG00000013955 MSANTD4 (ENSVVUG00000013957) #33 KBTBD3 (ENSVVUG00000013959) #34 AASDHPPT (ENSVVUG00000013961) #35 ENSVVUG00000013968 ENSVVUG00000013969 GUCY1A2 (ENSVVUG00000013971) #36 Canis_lupus ANCESTRAL SPECIES 28 ENSGT00390000013786 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155.a #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #23 ENSGT00940000159575 #24 ENSGT00950000182967.a.a.a.a.a.b.b.a ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000155677.b #32 ENSGT00950000186014 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00390000017443.g.a.a ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000163894 Dingo DUPLICATION Dingo DUPLICATION Dingo MODERN SPECIES 214 YAP1 (ENSCAFG00020009787) #8 BIRC3 (ENSCAFG00020009777) #9 BIRC2 (ENSCAFG00020009773) #10 ENSCAFG00020009766 #12 MMP20 (ENSCAFG00020009756) #13 MMP27 (ENSCAFG00020009747) #14 MMP8 (ENSCAFG00020009478) #15 MMP1 (ENSCAFG00020009380) #17 MMP3 (ENSCAFG00020009376) #18 MMP12 (ENSCAFG00020009354) #19 MMP13 (ENSCAFG00020009304) #20 ENSCAFG00020009289 #21 VDAC1 (ENSCAFG00020009285) ENSCAFG00020009260 #22 ENSCAFG00020009235 #22 ENSCAFG00020009224 #22 DDI1 (ENSCAFG00020009203) #23 PDGFD (ENSCAFG00020009202) #24 ENSCAFG00020009183 ENSCAFG00020009172 CASP12 (ENSCAFG00020009167) #25 ENSCAFG00020009158 ENSCAFG00020009148 GRIA4 (ENSCAFG00020009023) #32 MSANTD4 (ENSCAFG00020009005) #33 KBTBD3 (ENSCAFG00020008995) #34 AASDHPPT (ENSCAFG00020008990) #35 ENSCAFG00020008979 GUCY1A2 (ENSCAFG00020008933) #36 CWF19L2 (ENSCAFG00020008885) ALKBH8 (ENSCAFG00020008876) Dingo MODERN SPECIES 214 CEP126 (ENSCAFG00020009832) CFAP300 (ENSCAFG00020009803) #7 YAP1 (ENSCAFG00020009787) #8 BIRC3 (ENSCAFG00020009777) #9 BIRC2 (ENSCAFG00020009773) #10 ENSCAFG00020009766 #12 MMP20 (ENSCAFG00020009756) #13 MMP27 (ENSCAFG00020009747) #14 MMP8 (ENSCAFG00020009478) #15 MMP1 (ENSCAFG00020009380) #17 MMP3 (ENSCAFG00020009376) #18 MMP12 (ENSCAFG00020009354) #19 MMP13 (ENSCAFG00020009304) #20 ENSCAFG00020009289 #21 VDAC1 (ENSCAFG00020009285) ENSCAFG00020009260 #22 ENSCAFG00020009235 #22 ENSCAFG00020009224 #22 DDI1 (ENSCAFG00020009203) #23 PDGFD (ENSCAFG00020009202) #24 ENSCAFG00020009183 ENSCAFG00020009172 CASP12 (ENSCAFG00020009167) #25 ENSCAFG00020009158 ENSCAFG00020009148 GRIA4 (ENSCAFG00020009023) #32 MSANTD4 (ENSCAFG00020009005) #33 KBTBD3 (ENSCAFG00020008995) #34 AASDHPPT (ENSCAFG00020008990) #35 ENSCAFG00020008979 GUCY1A2 (ENSCAFG00020008933) #36 Dingo MODERN SPECIES 214 CFAP300 (ENSCAFG00020009803) #7 YAP1 (ENSCAFG00020009787) #8 BIRC3 (ENSCAFG00020009777) #9 BIRC2 (ENSCAFG00020009773) #10 ENSCAFG00020009766 #12 MMP20 (ENSCAFG00020009756) #13 MMP27 (ENSCAFG00020009747) #14 MMP8 (ENSCAFG00020009478) #15 MMP1 (ENSCAFG00020009380) #17 MMP3 (ENSCAFG00020009376) #18 MMP12 (ENSCAFG00020009354) #19 MMP13 (ENSCAFG00020009304) #20 ENSCAFG00020009289 #21 VDAC1 (ENSCAFG00020009285) ENSCAFG00020009260 #22 ENSCAFG00020009235 #22 ENSCAFG00020009224 #22 DDI1 (ENSCAFG00020009203) #23 PDGFD (ENSCAFG00020009202) #24 ENSCAFG00020009183 ENSCAFG00020009172 CASP12 (ENSCAFG00020009167) #25 ENSCAFG00020009158 ENSCAFG00020009148 GRIA4 (ENSCAFG00020009023) #32 MSANTD4 (ENSCAFG00020009005) #33 KBTBD3 (ENSCAFG00020008995) #34 AASDHPPT (ENSCAFG00020008990) #35 ENSCAFG00020008979 GUCY1A2 (ENSCAFG00020008933) #36 CWF19L2 (ENSCAFG00020008885) Dog DUPLICATION Dog MODERN SPECIES 33 YAP1 (ENSCAFG00845001157) #8 BIRC3 (ENSCAFG00845001106) #9 BIRC2 (ENSCAFG00845001046) #10 TMEM123 (ENSCAFG00845001013) #11 MMP7 (ENSCAFG00845000992) #12 MMP20 (ENSCAFG00845000974) #13 MMP27 (ENSCAFG00845000933) #14 MMP8 (ENSCAFG00845000899) #15 MMP1 (ENSCAFG00845000871) #17 MMP3 (ENSCAFG00845000842) #18 MMP12 (ENSCAFG00845000798) #19 MMP13 (ENSCAFG00845000761) #20 DCUN1D5 (ENSCAFG00845000732) #21 ENSCAFG00845000714 ENSCAFG00845000695 #22 ENSCAFG00845000669 #22 DDI1 (ENSCAFG00845000650) #23 PDGFD (ENSCAFG00845000627) #24 ENSCAFG00845000601 ENSCAFG00845000587 CASP12 (ENSCAFG00845000482) #25 CASP4 (ENSCAFG00845000375) ENSCAFG00845000322 GRIA4 (ENSCAFG00845000279) #32 MSANTD4 (ENSCAFG00845000215) #33 KBTBD3 (ENSCAFG00845004053) #34 AASDHPPT (ENSCAFG00845004003) #35 ENSCAFG00845003965 GUCY1A2 (ENSCAFG00845003912) #36 CWF19L2 (ENSCAFG00845003823) ALKBH8 (ENSCAFG00845003777) Dog MODERN SPECIES 33 CFAP300 (ENSCAFG00845001215) #7 YAP1 (ENSCAFG00845001157) #8 BIRC3 (ENSCAFG00845001106) #9 BIRC2 (ENSCAFG00845001046) #10 TMEM123 (ENSCAFG00845001013) #11 MMP7 (ENSCAFG00845000992) #12 MMP20 (ENSCAFG00845000974) #13 MMP27 (ENSCAFG00845000933) #14 MMP8 (ENSCAFG00845000899) #15 MMP1 (ENSCAFG00845000871) #17 MMP3 (ENSCAFG00845000842) #18 MMP12 (ENSCAFG00845000798) #19 MMP13 (ENSCAFG00845000761) #20 DCUN1D5 (ENSCAFG00845000732) #21 ENSCAFG00845000714 ENSCAFG00845000695 #22 ENSCAFG00845000669 #22 DDI1 (ENSCAFG00845000650) #23 PDGFD (ENSCAFG00845000627) #24 ENSCAFG00845000601 ENSCAFG00845000587 CASP12 (ENSCAFG00845000482) #25 CASP4 (ENSCAFG00845000375) ENSCAFG00845000322 GRIA4 (ENSCAFG00845000279) #32 MSANTD4 (ENSCAFG00845000215) #33 KBTBD3 (ENSCAFG00845004053) #34 AASDHPPT (ENSCAFG00845004003) #35 ENSCAFG00845003965 GUCY1A2 (ENSCAFG00845003912) #36 CWF19L2 (ENSCAFG00845003823) Atlantogenata ANCESTRAL SPECIES 40 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Xenarthra ANCESTRAL SPECIES 226 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 Sloth MODERN SPECIES 6953 ENSCHOG00000013607 #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 2666 MMP10 (ENSDNOG00000019850) #16 MMP1 (ENSDNOG00000046998) #17 MMP3 (ENSDNOG00000001886) #18 ENSDNOG00000049442 MMP12 (ENSDNOG00000016544) #19 MMP13 (ENSDNOG00000009362) #20 DCUN1D5 (ENSDNOG00000035460) #21 ENSDNOG00000035114 #22 Armadillo MODERN SPECIES 1006 ENSDNOG00000043081 ENSDNOG00000039026 ENSDNOG00000047695 #22 PDGFD (ENSDNOG00000035513) #24 DDI1 (ENSDNOG00000003578) #23 CASP12 (ENSDNOG00000001797) #25 ENSDNOG00000012369 #26 ENSDNOG00000010333 #28 GRIA4 (ENSDNOG00000035874) #32 MSANTD4 (ENSDNOG00000045060) #33 KBTBD3 (ENSDNOG00000036411) #34 AASDHPPT (ENSDNOG00000039175) #35 Afrotheria ANCESTRAL SPECIES 43 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 ENSGT00390000015655.a Tenrec MODERN SPECIES 7765 ENSETEG00000018615 #22 Afrotheria_a ANCESTRAL SPECIES 41 ENSGT00510000047559 #7 ENSGT00510000046760.a #8 ENSGT00940000154175.i.a #9 ENSGT00940000154175.i.b #10 ENSGT00530000063929.b #11 ENSGT00940000160903 #12 ENSGT00940000161277 #13 ENSGT00940000161159 #14 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #24 ENSGT00950000182999.a.b #23 ENSGT00940000162555 #25 ENSGT00940000161497 #26 ENSGT00940000159114 #28 ENSGT00940000155677.b #32 ENSGT00440000039469 #33 ENSGT00940000158415 #34 ENSGT00390000004663 #35 ENSGT00940000157765 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 ENSGT00390000015655.a Elephant MODERN SPECIES 340 CFAP300 (ENSLAFG00000003215) #7 YAP1 (ENSLAFG00000003216) #8 BIRC3 (ENSLAFG00000006047) #9 BIRC2 (ENSLAFG00000002953) #10 ENSLAFG00000002954 #11 MMP7 (ENSLAFG00000002955) #12 MMP20 (ENSLAFG00000010998) #13 MMP27 (ENSLAFG00000013164) #14 MMP8 (ENSLAFG00000013170) #15 MMP10 (ENSLAFG00000023165) #16 MMP1 (ENSLAFG00000001642) #17 MMP3 (ENSLAFG00000010058) #18 MMP12 (ENSLAFG00000010062) #19 MMP13 (ENSLAFG00000006001) #20 DCUN1D5 (ENSLAFG00000016481) #21 DYNC2H1 (ENSLAFG00000016899) #22 PDGFD (ENSLAFG00000004236) #24 DDI1 (ENSLAFG00000004238) #23 CASP12 (ENSLAFG00000023231) #25 ENSLAFG00000022421 #26 ENSLAFG00000016444 #28 GRIA4 (ENSLAFG00000010979) #32 MSANTD4 (ENSLAFG00000010986) #33 KBTBD3 (ENSLAFG00000013885) #34 AASDHPPT (ENSLAFG00000018543) #35 GUCY1A2 (ENSLAFG00000003075) #36 CWF19L2 (ENSLAFG00000004402) ALKBH8 (ENSLAFG00000017895) ELMOD1 (ENSLAFG00000002246) ENSLAFG00000002248 SLC35F2 (ENSLAFG00000009091) Hyrax MODERN SPECIES 6533 ENSPCAG00000004356 #22