Vertebrata ANCESTRAL SPECIES ENSGT00940000154620 #22 Gnathostomata ANCESTRAL SPECIES 330 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000004859 ENSGT00940000155627 ENSGT00940000158563 Euteleostomi ANCESTRAL SPECIES 393 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 Sarcopterygii ANCESTRAL SPECIES 55 ENSGT00940000160903 #11 ENSGT00940000156340.b ENSGT00940000161277 #12 ENSGT00940000154907.a.a ##17 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT00940000158415 #35 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000164873 ENSGT00390000002144 ENSGT00410000025596.a.b ENSGT00940000156761 Tetrapoda ANCESTRAL SPECIES ENSGT00940000155492.b ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000156340.b ENSGT00940000161277 #12 ENSGT00940000154907.b #17 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E ENSGT00390000012388 Amniota ANCESTRAL SPECIES ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000156340.b ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E ENSGT00390000012388 Mammalia ANCESTRAL SPECIES 73 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000156340.b ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000162428 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E Theria ANCESTRAL SPECIES 15 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000156340.b ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000166491 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000162428.b ENSGT00940000162555 #25 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 Eutheria ANCESTRAL SPECIES 3 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT01100000263709 Boreoeutheria ANCESTRAL SPECIES 1 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00940000154175.j ##9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000162428.b ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 Euarchontoglires ANCESTRAL SPECIES 1 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00940000154175.j ##9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000162428.b ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 ENSGT00940000159782 Primates ANCESTRAL SPECIES ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 Haplorrhini ANCESTRAL SPECIES ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 ENSGT00940000159782 Simiiformes ANCESTRAL SPECIES ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 Catarrhini ANCESTRAL SPECIES 1 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##30 ENSGT00940000159114.a.a #30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000004524.c.a.a.a.a.a.a Cercopithecidae ANCESTRAL SPECIES ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##30 ENSGT00940000159114.a.a #30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000004524.c.a.a.a.a.a.a Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000004524.c.a.a.a.a.a.a ENSGT00940000155627 Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00910000147733 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000004524.c.a.a.a.a.a.a Macaca ANCESTRAL SPECIES 2 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00910000147733 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000004524.c.a.a.a.a.a.a Macaca_a ANCESTRAL SPECIES 3 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 Rhesus MODERN SPECIES 5 YAP1 (ENSMMUG00000003396) #7 BIRC3 (ENSMMUG00000058594) #8 BIRC2 (ENSMMUG00000003400) #9 TMEM123 (ENSMMUG00000003403) #10 MMP7 (ENSMMUG00000003405) #11 MMP20 (ENSMMUG00000011013) #12 MMP27 (ENSMMUG00000011015) #13 ENSMMUG00000053278 #14 MMP8 (ENSMMUG00000004489) #15 MMP10 (ENSMMUG00000021764) #16 MMP1 (ENSMMUG00000002037) #17 MMP3 (ENSMMUG00000004249) #18 MMP12 (ENSMMUG00000004250) #19 MMP13 (ENSMMUG00000004253) #20 DCUN1D5 (ENSMMUG00000007008) #21 DYNC2H1 (ENSMMUG00000018308) #22 PDGFD (ENSMMUG00000005353) #23 DDI1 (ENSMMUG00000042509) #24 CASP12 (ENSMMUG00000016548) #25 CASP4 (ENSMMUG00000009850) #26 CASP5 (ENSMMUG00000009851) #27 CASP1 (ENSMMUG00000009852) #28 ENSMMUG00000051672 #29 ENSMMUG00000009854 #30 CARD18 (ENSMMUG00000021551) #31 ENSMMUG00000049289 #32 GRIA4 (ENSMMUG00000010987) #33 MSANTD4 (ENSMMUG00000010988) #34 KBTBD3 (ENSMMUG00000010989) #35 AASDHPPT (ENSMMUG00000010990) #36 ENSMMUG00000062630 #37 Crab-eating macaque MODERN SPECIES 5 YAP1 (ENSMFAG00000037027) #7 BIRC2 (ENSMFAG00000033018) #9 TMEM123 (ENSMFAG00000057826) #10 ENSMFAG00000056286 ENSMFAG00000060149 MMP7 (ENSMFAG00000037818) #11 MMP20 (ENSMFAG00000035397) #12 MMP27 (ENSMFAG00000043441) #13 MMP8 (ENSMFAG00000032735) #15 MMP10 (ENSMFAG00000031795) #16 MMP1 (ENSMFAG00000035922) #17 MMP3 (ENSMFAG00000037925) #18 MMP12 (ENSMFAG00000037971) #19 MMP13 (ENSMFAG00000001049) #20 DCUN1D5 (ENSMFAG00000033871) #21 DYNC2H1 (ENSMFAG00000039001) #22 PDGFD (ENSMFAG00000035368) #23 ENSMFAG00000058317 CASP12 (ENSMFAG00000019805) #25 CASP4 (ENSMFAG00000000204) #26 CASP5 (ENSMFAG00000063780) #27 CASP1 (ENSMFAG00000001158) #28 ENSMFAG00000043576 #30 ENSMFAG00000039181 #30 CARD18 (ENSMFAG00000037895) #31 GRIA4 (ENSMFAG00000001913) #33 MSANTD4 (ENSMFAG00000034061) #34 KBTBD3 (ENSMFAG00000031041) #35 AASDHPPT (ENSMFAG00000046243) #36 GUCY1A2 (ENSMFAG00000034683) ENSMFAG00000054943 Pig-tailed macaque MODERN SPECIES 204 CFAP300 (ENSMNEG00000038673) YAP1 (ENSMNEG00000032086) #7 BIRC3 (ENSMNEG00000040332) #8 BIRC2 (ENSMNEG00000038024) #9 TMEM123 (ENSMNEG00000040184) #10 MMP7 (ENSMNEG00000040439) #11 MMP20 (ENSMNEG00000020408) #12 MMP27 (ENSMNEG00000041633) #13 MMP8 (ENSMNEG00000031542) #15 MMP10 (ENSMNEG00000026876) #16 MMP1 (ENSMNEG00000034618) #17 MMP3 (ENSMNEG00000043414) #18 MMP12 (ENSMNEG00000040391) #19 MMP13 (ENSMNEG00000037655) #20 DCUN1D5 (ENSMNEG00000029266) #21 DYNC2H1 (ENSMNEG00000042907) #22 DDI1 (ENSMNEG00000023817) #24 PDGFD (ENSMNEG00000036191) #23 CASP12 (ENSMNEG00000032441) #25 CASP4 (ENSMNEG00000027443) #26 CASP5 (ENSMNEG00000035890) #27 CASP1 (ENSMNEG00000007166) #28 ENSMNEG00000045362 #30 CARD18 (ENSMNEG00000041604) #31 ENSMNEG00000034986 GRIA4 (ENSMNEG00000039956) #33 MSANTD4 (ENSMNEG00000028862) #34 KBTBD3 (ENSMNEG00000041894) #35 AASDHPPT (ENSMNEG00000032892) #36 ENSMNEG00000036279 ENSMNEG00000043288 Cercopithecinae_b ANCESTRAL SPECIES 21 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00910000147733 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000004524.c.a.a.a.a.a.a Cercopithecinae_d ANCESTRAL SPECIES 45 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00910000147733 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000004524.c.a.a.a.a.a.a Sooty mangabey MODERN SPECIES 138 MMP7 (ENSCATG00000044241) #11 MMP20 (ENSCATG00000043912) #12 MMP27 (ENSCATG00000043668) #13 MMP8 (ENSCATG00000035287) #15 MMP10 (ENSCATG00000032332) #16 MMP1 (ENSCATG00000044122) #17 MMP3 (ENSCATG00000040255) #18 MMP12 (ENSCATG00000032347) #19 MMP13 (ENSCATG00000037318) #20 DCUN1D5 (ENSCATG00000045156) #21 ENSCATG00000045002 DYNC2H1 (ENSCATG00000022191) #22 DDI1 (ENSCATG00000016207) #24 PDGFD (ENSCATG00000032486) #23 CASP12 (ENSCATG00000032709) #25 CASP4 (ENSCATG00000034381) #26 CASP5 (ENSCATG00000033400) #27 ENSCATG00000034782 #30 CASP1 (ENSCATG00000031081) #28 CARD18 (ENSCATG00000044271) #31 ENSCATG00000040187 GRIA4 (ENSCATG00000039166) #33 MSANTD4 (ENSCATG00000030475) #34 KBTBD3 (ENSCATG00000044798) #35 AASDHPPT (ENSCATG00000043976) #36 GUCY1A2 (ENSCATG00000037410) ENSCATG00000022017 Drill MODERN SPECIES 895 BIRC3 (ENSMLEG00000041716) #8 BIRC2 (ENSMLEG00000035461) #9 ENSMLEG00000035112 TMEM123 (ENSMLEG00000034191) #10 MMP7 (ENSMLEG00000031118) #11 MMP20 (ENSMLEG00000030794) #12 MMP27 (ENSMLEG00000031462) #13 MMP8 (ENSMLEG00000042565) #15 MMP10 (ENSMLEG00000031529) #16 MMP1 (ENSMLEG00000041475) #17 ENSMLEG00000032101 MMP3 (ENSMLEG00000043132) #18 MMP12 (ENSMLEG00000031646) #19 MMP13 (ENSMLEG00000033536) #20 DCUN1D5 (ENSMLEG00000043262) #21 DYNC2H1 (ENSMLEG00000038133) #22 PDGFD (ENSMLEG00000028545) #23 Olive baboon MODERN SPECIES 3 ENSPANG00000047316 YAP1 (ENSPANG00000007466) #7 BIRC3 (ENSPANG00000018870) #8 TMEM123 (ENSPANG00000014629) #10 MMP7 (ENSPANG00000012249) #11 MMP20 (ENSPANG00000003601) #12 MMP27 (ENSPANG00000032087) #13 MMP8 (ENSPANG00000019175) #15 MMP10 (ENSPANG00000007953) #16 MMP1 (ENSPANG00000018869) #17 MMP3 (ENSPANG00000014348) #18 MMP12 (ENSPANG00000018407) #19 MMP13 (ENSPANG00000016548) #20 ENSPANG00000041736 DCUN1D5 (ENSPANG00000007860) #21 DYNC2H1 (ENSPANG00000023174) #22 PDGFD (ENSPANG00000017124) #23 ENSPANG00000047317 ##32 CASP12 (ENSPANG00000003600) #25 CASP5 (ENSPANG00000022854) #27 CASP1 (ENSPANG00000007465) #28 ENSPANG00000046546 #30 ENSPANG00000032384 #30 ENSPANG00000003972 #30 CARD18 (ENSPANG00000041528) #31 ENSPANG00000040645 ENSPANG00000034834 ##32 GRIA4 (ENSPANG00000003734) #33 MSANTD4 (ENSPANG00000017474) #34 KBTBD3 (ENSPANG00000014883) #35 AASDHPPT (ENSPANG00000019124) #36 Vervet Monkey MODERN SPECIES CFAP300 (ENSCSAG00000003227) YAP1 (ENSCSAG00000003224) #7 BIRC3 (ENSCSAG00000003222) #8 TMEM123 (ENSCSAG00000003220) #10 MMP7 (ENSCSAG00000003219) #11 MMP20 (ENSCSAG00000003216) #12 ENSCSAG00000000605 MMP27 (ENSCSAG00000003213) #13 MMP8 (ENSCSAG00000003209) #15 MMP10 (ENSCSAG00000003203) #16 MMP1 (ENSCSAG00000003198) #17 MMP3 (ENSCSAG00000003190) #18 MMP12 (ENSCSAG00000003188) #19 MMP13 (ENSCSAG00000003185) #20 DCUN1D5 (ENSCSAG00000003173) #21 DYNC2H1 (ENSCSAG00000003153) #22 PDGFD (ENSCSAG00000003085) #23 DDI1 (ENSCSAG00000000604) #24 CASP12 (ENSCSAG00000003084) #25 CASP4 (ENSCSAG00000003080) #26 CASP5 (ENSCSAG00000003077) #27 ENSCSAG00000003073 #28 ENSCSAG00000003066 #28 ENSCSAG00000003063 #30 CARD18 (ENSCSAG00000000603) #31 GRIA4 (ENSCSAG00000003058) #33 MSANTD4 (ENSCSAG00000003048) #34 KBTBD3 (ENSCSAG00000003044) #35 AASDHPPT (ENSCSAG00000003042) #36 ENSCSAG00000000602 GUCY1A2 (ENSCSAG00000003037) Rhinopithecus ANCESTRAL SPECIES 347 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 Golden snub-nosed monkey MODERN SPECIES 2119 CFAP300 (ENSRROG00000030852) YAP1 (ENSRROG00000033903) #7 BIRC3 (ENSRROG00000039472) #8 BIRC2 (ENSRROG00000039789) #9 TMEM123 (ENSRROG00000035161) #10 MMP7 (ENSRROG00000044514) #11 MMP20 (ENSRROG00000038564) #12 MMP27 (ENSRROG00000008615) #13 MMP8 (ENSRROG00000037624) #15 MMP10 (ENSRROG00000042454) #16 MMP1 (ENSRROG00000030668) #17 MMP3 (ENSRROG00000043417) #18 MMP12 (ENSRROG00000033367) #19 MMP13 (ENSRROG00000042337) #20 DCUN1D5 (ENSRROG00000033290) #21 DYNC2H1 (ENSRROG00000029529) #22 Black snub-nosed monkey MODERN SPECIES 1497 CFAP300 (ENSRBIG00000043051) YAP1 (ENSRBIG00000036436) #7 BIRC3 (ENSRBIG00000017780) #8 BIRC2 (ENSRBIG00000029682) #9 TMEM123 (ENSRBIG00000002017) #10 MMP7 (ENSRBIG00000036156) #11 MMP20 (ENSRBIG00000033578) #12 MMP27 (ENSRBIG00000039707) #13 MMP8 (ENSRBIG00000036384) #15 MMP10 (ENSRBIG00000027869) #16 MMP1 (ENSRBIG00000028827) #17 MMP3 (ENSRBIG00000018235) #18 MMP12 (ENSRBIG00000032255) #19 MMP13 (ENSRBIG00000038724) #20 DCUN1D5 (ENSRBIG00000038043) #21 DYNC2H1 (ENSRBIG00000039808) #22 Hominoidea ANCESTRAL SPECIES 1 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##30 ENSGT00940000159114.a.a #30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000004524.c.a.a.a.a.a.a Hominidae ANCESTRAL SPECIES 1 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.a #30 ENSGT00940000159114.a.b ##30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000004524.c.a.a.a.a.a.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 8 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##30 ENSGT00940000164349 #31 ENSGT00940000159114.a.a #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000004524.c.a.a.a.a.a.a Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##30 ENSGT00940000164349 #31 ENSGT00940000159114.a.a #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000004524.c.a.a.a.a.a.a Pan ANCESTRAL SPECIES 1 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000171202 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##30 ENSGT00940000159114.a.a #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000004524.c.a.a.a.a.a.a ENSGT00940000155627 Chimpanzee MODERN SPECIES 2 YAP1 (ENSPTRG00000004211) #7 BIRC3 (ENSPTRG00000004212) #8 BIRC2 (ENSPTRG00000004213) #9 TMEM123 (ENSPTRG00000022738) #10 MMP7 (ENSPTRG00000004215) #11 MMP20 (ENSPTRG00000004216) #12 MMP27 (ENSPTRG00000004217) #13 MMP8 (ENSPTRG00000004218) #15 MMP10 (ENSPTRG00000004219) #16 MMP1 (ENSPTRG00000023318) #17 ENSPTRG00000043621 MMP3 (ENSPTRG00000004220) #18 MMP12 (ENSPTRG00000048755) #19 MMP13 (ENSPTRG00000004222) #20 DCUN1D5 (ENSPTRG00000004223) #21 DYNC2H1 (ENSPTRG00000004224) #22 PDGFD (ENSPTRG00000004227) #23 CASP12 (ENSPTRG00000028413) #25 CASP4 (ENSPTRG00000023646) #26 CASP5 (ENSPTRG00000004230) #27 CASP1 (ENSPTRG00000048268) #28 ENSPTRG00000052161 ##30 ENSPTRG00000004231 #30 GRIA4 (ENSPTRG00000004233) #33 MSANTD4 (ENSPTRG00000004234) #34 KBTBD3 (ENSPTRG00000004235) #35 AASDHPPT (ENSPTRG00000004236) #36 GUCY1A2 (ENSPTRG00000004238) ENSPTRG00000045119 CWF19L2 (ENSPTRG00000004239) ENSPTRG00000047347 Bonobo MODERN SPECIES 2 YAP1 (ENSPPAG00000042951) #7 BIRC3 (ENSPPAG00000029649) #8 BIRC2 (ENSPPAG00000004061) #9 TMEM123 (ENSPPAG00000040642) #10 MMP7 (ENSPPAG00000033482) #11 MMP20 (ENSPPAG00000007692) #12 MMP27 (ENSPPAG00000030100) #13 MMP8 (ENSPPAG00000029244) #15 MMP10 (ENSPPAG00000019189) #16 MMP1 (ENSPPAG00000040747) #17 ENSPPAG00000031769 MMP3 (ENSPPAG00000036174) #18 MMP12 (ENSPPAG00000007778) #19 MMP13 (ENSPPAG00000028323) #20 DCUN1D5 (ENSPPAG00000030025) #21 DYNC2H1 (ENSPPAG00000040117) #22 PDGFD (ENSPPAG00000033732) #23 DDI1 (ENSPPAG00000020620) #24 CASP12 (ENSPPAG00000039543) #25 CASP4 (ENSPPAG00000042390) #26 CASP1 (ENSPPAG00000030163) #28 CARD16 (ENSPPAG00000042935) ##30 ENSPPAG00000035963 #30 GRIA4 (ENSPPAG00000026718) #33 MSANTD4 (ENSPPAG00000043080) #34 KBTBD3 (ENSPPAG00000043957) #35 AASDHPPT (ENSPPAG00000030173) #36 ENSPPAG00000043185 ENSPPAG00000037738 CWF19L2 (ENSPPAG00000023443) ENSPPAG00000042965 Human MODERN SPECIES 2 CFAP300 (ENSG00000137691) YAP1 (ENSG00000137693) #7 BIRC3 (ENSG00000023445) #8 BIRC2 (ENSG00000110330) #9 TMEM123 (ENSG00000152558) #10 MMP7 (ENSG00000137673) #11 MMP20 (ENSG00000137674) #12 MMP27 (ENSG00000137675) #13 MMP8 (ENSG00000118113) #15 MMP10 (ENSG00000166670) #16 MMP1 (ENSG00000196611) #17 MMP3 (ENSG00000149968) #18 MMP12 (ENSG00000262406) #19 MMP13 (ENSG00000137745) #20 DCUN1D5 (ENSG00000137692) #21 DYNC2H1 (ENSG00000187240) #22 PDGFD (ENSG00000170962) #23 DDI1 (ENSG00000170967) #24 CASP12 (ENSG00000204403) #25 CASP4 (ENSG00000196954) #26 CASP5 (ENSG00000137757) #27 CASP1 (ENSG00000137752) #28 CARD16 (ENSG00000204397) ##30 CARD18 (ENSG00000255501) #31 GRIA4 (ENSG00000152578) #33 MSANTD4 (ENSG00000170903) #34 KBTBD3 (ENSG00000182359) #35 AASDHPPT (ENSG00000149313) #36 GUCY1A2 (ENSG00000152402) CWF19L2 (ENSG00000152404) ALKBH8 (ENSG00000137760) Gorilla MODERN SPECIES 2 ENSGGOG00000005796 #7 BIRC3 (ENSGGOG00000005827) #8 BIRC2 (ENSGGOG00000008327) #9 TMEM123 (ENSGGOG00000008331) #10 ENSGGOG00000015908 #11 MMP20 (ENSGGOG00000003314) #12 MMP27 (ENSGGOG00000008717) #13 MMP8 (ENSGGOG00000008722) #15 MMP10 (ENSGGOG00000026738) #16 MMP1 (ENSGGOG00000008869) #17 ENSGGOG00000037629 MMP3 (ENSGGOG00000010315) #18 MMP12 (ENSGGOG00000015496) #19 MMP13 (ENSGGOG00000003490) #20 DCUN1D5 (ENSGGOG00000028011) #21 DYNC2H1 (ENSGGOG00000012522) #22 PDGFD (ENSGGOG00000002102) #23 DDI1 (ENSGGOG00000012736) #24 CASP12 (ENSGGOG00000012075) #25 CASP4 (ENSGGOG00000023145) #26 CASP5 (ENSGGOG00000015759) #27 CASP1 (ENSGGOG00000023820) #28 ENSGGOG00000002144 ##30 ENSGGOG00000038864 #30 CARD18 (ENSGGOG00000003113) #31 GRIA4 (ENSGGOG00000017011) #33 MSANTD4 (ENSGGOG00000009947) #34 KBTBD3 (ENSGGOG00000003966) #35 ENSGGOG00000039147 #36 GUCY1A2 (ENSGGOG00000009726) ENSGGOG00000038540 Orangutan MODERN SPECIES 2 YAP1 (ENSPPYG00000003806) #7 BIRC3 (ENSPPYG00000034604) #8 BIRC2 (ENSPPYG00000003808) #9 TMEM123 (ENSPPYG00000003809) #10 MMP7 (ENSPPYG00000003810) #11 MMP20 (ENSPPYG00000003811) #12 MMP27 (ENSPPYG00000037566) #13 MMP8 (ENSPPYG00000003812) #15 ENSPPYG00000033588 MMP10 (ENSPPYG00000032892) #16 MMP1 (ENSPPYG00000003813) #17 MMP3 (ENSPPYG00000003814) #18 MMP12 (ENSPPYG00000034070) #19 MMP13 (ENSPPYG00000003815) #20 DCUN1D5 (ENSPPYG00000003816) #21 DYNC2H1 (ENSPPYG00000003819) #22 PDGFD (ENSPPYG00000003821) #23 DDI1 (ENSPPYG00000003822) #24 ENSPPYG00000003823 #25 CASP4 (ENSPPYG00000003824) #26 CASP5 (ENSPPYG00000003825) #27 CASP1 (ENSPPYG00000003826) #28 ENSPPYG00000037088 ##30 ENSPPYG00000039362 #30 ENSPPYG00000034995 #30 CARD18 (ENSPPYG00000003827) #31 GRIA4 (ENSPPYG00000003828) #33 MSANTD4 (ENSPPYG00000003829) #34 KBTBD3 (ENSPPYG00000032968) #35 AASDHPPT (ENSPPYG00000003831) #36 GUCY1A2 (ENSPPYG00000003832) Gibbon MODERN SPECIES 5 YAP1 (ENSNLEG00000007164) #7 ENSNLEG00000033031 BIRC3 (ENSNLEG00000007165) #8 BIRC2 (ENSNLEG00000031093) #9 TMEM123 (ENSNLEG00000007167) #10 MMP7 (ENSNLEG00000007168) #11 MMP20 (ENSNLEG00000007169) #12 MMP27 (ENSNLEG00000007170) #13 ENSNLEG00000028184 #15 MMP10 (ENSNLEG00000007177) #16 MMP1 (ENSNLEG00000007171) #17 MMP3 (ENSNLEG00000007178) #18 MMP12 (ENSNLEG00000007183) #19 MMP13 (ENSNLEG00000007186) #20 DCUN1D5 (ENSNLEG00000007189) #21 DYNC2H1 (ENSNLEG00000007190) #22 DDI1 (ENSNLEG00000019234) #24 PDGFD (ENSNLEG00000027133) #23 ENSNLEG00000027825 CASP4 (ENSNLEG00000007194) #26 CASP5 (ENSNLEG00000007197) #27 CASP1 (ENSNLEG00000007200) #28 GRIA4 (ENSNLEG00000007202) #33 MSANTD4 (ENSNLEG00000007207) #34 KBTBD3 (ENSNLEG00000007209) #35 AASDHPPT (ENSNLEG00000007211) #36 ENSNLEG00000007212 ENSNLEG00000027810 ENSNLEG00000034019 CWF19L2 (ENSNLEG00000007213) ALKBH8 (ENSNLEG00000007217) Platyrrhini ANCESTRAL SPECIES 3 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627.a.a ENSGT00940000158563 ENSGT00940000159782 Cebidae ANCESTRAL SPECIES ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627.a.a ENSGT00940000158563 ENSGT00940000159782 Cebidae_a ANCESTRAL SPECIES 22 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000161497.h #26 ENSGT00940000161497.g #27 ENSGT00940000159114.b #28 ENSGT00940000159114.a.b ##30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627.a.a ENSGT00940000158563 ENSGT00940000159782 ENSGT00390000015655.a Bolivian squirrel monkey MODERN SPECIES 50 ENSSBOG00000036077 YAP1 (ENSSBOG00000027497) #7 BIRC3 (ENSSBOG00000031187) #8 BIRC2 (ENSSBOG00000034069) #9 ENSSBOG00000029913 #10 MMP7 (ENSSBOG00000026550) #11 MMP20 (ENSSBOG00000023588) #12 MMP27 (ENSSBOG00000003176) #13 MMP8 (ENSSBOG00000031477) #15 MMP10 (ENSSBOG00000029788) #16 MMP1 (ENSSBOG00000034105) #17 MMP3 (ENSSBOG00000033146) #18 MMP12 (ENSSBOG00000028385) #19 MMP13 (ENSSBOG00000035950) #20 ENSSBOG00000033947 #21 DYNC2H1 (ENSSBOG00000032663) #22 PDGFD (ENSSBOG00000027472) #23 CASP4 (ENSSBOG00000023437) #26 CASP5 (ENSSBOG00000030105) #27 ENSSBOG00000028391 ##30 CASP1 (ENSSBOG00000021781) #28 CARD18 (ENSSBOG00000032567) #31 ENSSBOG00000022920 GRIA4 (ENSSBOG00000025256) #33 MSANTD4 (ENSSBOG00000031639) #34 KBTBD3 (ENSSBOG00000024589) #35 AASDHPPT (ENSSBOG00000014423) #36 GUCY1A2 (ENSSBOG00000020105) CWF19L2 (ENSSBOG00000033647) ALKBH8 (ENSSBOG00000031504) ELMOD1 (ENSSBOG00000031365) Capuchin MODERN SPECIES 171 TMEM123 (ENSCCAG00000021231) #10 ENSCCAG00000017186 ENSCCAG00000026170 ENSCCAG00000015782 ENSCCAG00000028209 MMP7 (ENSCCAG00000021369) #11 MMP20 (ENSCCAG00000023652) #12 MMP27 (ENSCCAG00000034842) #13 MMP8 (ENSCCAG00000032628) #15 MMP10 (ENSCCAG00000036577) #16 MMP1 (ENSCCAG00000021222) #17 MMP3 (ENSCCAG00000029156) #18 MMP12 (ENSCCAG00000034212) #19 MMP13 (ENSCCAG00000001423) #20 DCUN1D5 (ENSCCAG00000036060) #21 DYNC2H1 (ENSCCAG00000032776) #22 PDGFD (ENSCCAG00000033710) #23 CASP4 (ENSCCAG00000025091) #26 CASP1 (ENSCCAG00000024150) #28 ENSCCAG00000023890 ##30 CARD18 (ENSCCAG00000032639) #31 ENSCCAG00000028762 GRIA4 (ENSCCAG00000021010) #33 MSANTD4 (ENSCCAG00000033896) #34 KBTBD3 (ENSCCAG00000016315) #35 AASDHPPT (ENSCCAG00000024359) #36 Marmoset MODERN SPECIES 2 BIRC2 (ENSCJAG00000003804) #9 TMEM123 (ENSCJAG00000003801) #10 MMP7 (ENSCJAG00000003793) #11 MMP20 (ENSCJAG00000003781) #12 MMP27 (ENSCJAG00000003769) #13 MMP8 (ENSCJAG00000003743) #15 MMP10 (ENSCJAG00000016298) #16 MMP1 (ENSCJAG00000014107) #17 MMP3 (ENSCJAG00000038052) #18 MMP12 (ENSCJAG00000009452) #19 MMP13 (ENSCJAG00000009477) #20 DCUN1D5 (ENSCJAG00000009502) #21 DYNC2H1 (ENSCJAG00000009549) #22 ENSCJAG00000085591 PDGFD (ENSCJAG00000009788) #23 DDI1 (ENSCJAG00000053103) #24 CASP4 (ENSCJAG00000009805) #26 ENSCJAG00000069635 #27 CASP1 (ENSCJAG00000009842) #28 ENSCJAG00000079451 ##30 ENSCJAG00000038168 ##30 CARD18 (ENSCJAG00000021995) #31 GRIA4 (ENSCJAG00000009874) #33 ENSCJAG00000073825 ##37 MSANTD4 (ENSCJAG00000046964) #34 KBTBD3 (ENSCJAG00000043912) #35 AASDHPPT (ENSCJAG00000075247) #36 ENSCJAG00000084129 Mas night monkey MODERN SPECIES 278 YAP1 (ENSANAG00000029463) #7 ENSANAG00000022618 BIRC3 (ENSANAG00000035989) #8 BIRC2 (ENSANAG00000037030) #9 TMEM123 (ENSANAG00000029026) #10 MMP7 (ENSANAG00000023347) #11 MMP20 (ENSANAG00000021702) #12 MMP27 (ENSANAG00000020509) #13 MMP8 (ENSANAG00000023440) #15 MMP3 (ENSANAG00000029899) #18 MMP1 (ENSANAG00000028859) #17 ENSANAG00000004878 MMP12 (ENSANAG00000022445) #19 MMP13 (ENSANAG00000020799) #20 DCUN1D5 (ENSANAG00000034204) #21 DYNC2H1 (ENSANAG00000035967) #22 PDGFD (ENSANAG00000023791) #23 CASP4 (ENSANAG00000027784) #26 CASP1 (ENSANAG00000032743) #28 CARD16 (ENSANAG00000028470) ##30 CARD18 (ENSANAG00000028356) #31 ENSANAG00000036500 ENSANAG00000023856 ENSANAG00000009840 Tarsier MODERN SPECIES 4417 MMP13 (ENSTSYG00000009858) #20 DCUN1D5 (ENSTSYG00000001262) #21 DYNC2H1 (ENSTSYG00000006371) #22 Strepsirrhini ANCESTRAL SPECIES 6 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162428.b ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000164349 #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 Bushbaby MODERN SPECIES 116 YAP1 (ENSOGAG00000002885) #7 ENSOGAG00000026633 BIRC3 (ENSOGAG00000005946) #8 ENSOGAG00000010377 #9 ENSOGAG00000028751 #10 MMP7 (ENSOGAG00000024291) #11 MMP20 (ENSOGAG00000015247) #12 MMP27 (ENSOGAG00000015250) #13 MMP8 (ENSOGAG00000015256) #15 MMP10 (ENSOGAG00000010212) #16 MMP1 (ENSOGAG00000010215) #17 MMP3 (ENSOGAG00000010220) #18 MMP12 (ENSOGAG00000010221) #19 MMP13 (ENSOGAG00000010224) #20 DCUN1D5 (ENSOGAG00000010225) #21 DYNC2H1 (ENSOGAG00000033838) #22 KDM4D (ENSOGAG00000032607) CWC15 (ENSOGAG00000001686) AMOTL1 (ENSOGAG00000003989) PIWIL4 (ENSOGAG00000012156) FUT4 (ENSOGAG00000025107) C11orf97 (ENSOGAG00000033264) ANKRD49 (ENSOGAG00000012155) MRE11 (ENSOGAG00000012154) GPR83 (ENSOGAG00000002520) IZUMO1R (ENSOGAG00000002522) PANX1 (ENSOGAG00000015294) HEPHL1 (ENSOGAG00000015952) ENSOGAG00000034157 ENSOGAG00000033509 ENSOGAG00000026605 Lemuriformes ANCESTRAL SPECIES 13 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000164349.b #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 Mouse lemur MODERN SPECIES 27 CFAP300 (ENSMICG00000017739) YAP1 (ENSMICG00000031456) #7 BIRC3 (ENSMICG00000002746) #8 ENSMICG00000044293 ENSMICG00000016656 #10 MMP7 (ENSMICG00000002935) #11 MMP20 (ENSMICG00000002940) #12 MMP27 (ENSMICG00000036959) #13 MMP8 (ENSMICG00000014462) #15 MMP10 (ENSMICG00000006282) #16 MMP1 (ENSMICG00000006291) #17 MMP3 (ENSMICG00000006301) #18 MMP12 (ENSMICG00000006319) #19 MMP13 (ENSMICG00000006323) #20 DCUN1D5 (ENSMICG00000006329) #21 DYNC2H1 (ENSMICG00000029576) #22 PDGFD (ENSMICG00000002460) #23 DDI1 (ENSMICG00000002464) #24 ENSMICG00000001838 #27 CASP12 (ENSMICG00000001832) #25 ENSMICG00000001846 #30 ENSMICG00000028150 #31 ENSMICG00000042671 #31 GRIA4 (ENSMICG00000003112) #33 MSANTD4 (ENSMICG00000036595) #34 KBTBD3 (ENSMICG00000030981) #35 AASDHPPT (ENSMICG00000032630) #36 ENSMICG00000036566 ENSMICG00000035020 GUCY1A2 (ENSMICG00000004925) CWF19L2 (ENSMICG00000010853) Lemuriformes_a ANCESTRAL SPECIES 22 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000164349.b #31 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Greater bamboo lemur MODERN SPECIES 475 YAP1 (ENSPSMG00000009653) #7 BIRC3 (ENSPSMG00000009531) #8 BIRC2 (ENSPSMG00000009475) #9 ENSPSMG00000009400 #10 MMP7 (ENSPSMG00000009394) #11 MMP20 (ENSPSMG00000009381) #12 MMP27 (ENSPSMG00000009374) #13 MMP8 (ENSPSMG00000009363) #15 ENSPSMG00000009358 #17 MMP10 (ENSPSMG00000009342) #16 MMP1 (ENSPSMG00000009331) #17 MMP3 (ENSPSMG00000009315) #18 MMP12 (ENSPSMG00000009292) #19 MMP13 (ENSPSMG00000009286) #20 DCUN1D5 (ENSPSMG00000009263) #21 DYNC2H1 (ENSPSMG00000008986) #22 DDI1 (ENSPSMG00000008421) #24 PDGFD (ENSPSMG00000008395) #23 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 760 CFAP300 (ENSPCOG00000001504) YAP1 (ENSPCOG00000017226) #7 BIRC3 (ENSPCOG00000009368) #8 BIRC2 (ENSPCOG00000022626) #9 TMEM123 (ENSPCOG00000005902) #10 MMP7 (ENSPCOG00000027243) #11 MMP20 (ENSPCOG00000015806) #12 MMP27 (ENSPCOG00000024142) #13 MMP8 (ENSPCOG00000003235) #15 MMP10 (ENSPCOG00000017692) #16 MMP1 (ENSPCOG00000022669) #17 MMP3 (ENSPCOG00000023323) #18 MMP12 (ENSPCOG00000015277) #19 MMP13 (ENSPCOG00000028792) #20 DCUN1D5 (ENSPCOG00000004961) #21 ENSPCOG00000027848 #22 ENSPCOG00000025113 #22 PDGFD (ENSPCOG00000018484) #23 ENSPCOG00000021168 #27 ENSPCOG00000013698 #27 ENSPCOG00000019189 ENSPCOG00000028357 #30 CARD18 (ENSPCOG00000012524) #31 GRIA4 (ENSPCOG00000028018) #33 MSANTD4 (ENSPCOG00000023276) #34 KBTBD3 (ENSPCOG00000021176) #35 AASDHPPT (ENSPCOG00000014297) #36 GUCY1A2 (ENSPCOG00000016375) ENSPCOG00000015897 CWF19L2 (ENSPCOG00000018032) ALKBH8 (ENSPCOG00000022645) Coquerels sifaka MODERN SPECIES 760 YAP1 (ENSPCOG00000017226) #7 BIRC3 (ENSPCOG00000009368) #8 BIRC2 (ENSPCOG00000022626) #9 TMEM123 (ENSPCOG00000005902) #10 MMP7 (ENSPCOG00000027243) #11 MMP20 (ENSPCOG00000015806) #12 MMP27 (ENSPCOG00000024142) #13 MMP8 (ENSPCOG00000003235) #15 MMP10 (ENSPCOG00000017692) #16 MMP1 (ENSPCOG00000022669) #17 MMP3 (ENSPCOG00000023323) #18 MMP12 (ENSPCOG00000015277) #19 MMP13 (ENSPCOG00000028792) #20 DCUN1D5 (ENSPCOG00000004961) #21 ENSPCOG00000027848 #22 ENSPCOG00000025113 #22 PDGFD (ENSPCOG00000018484) #23 ENSPCOG00000021168 #27 ENSPCOG00000013698 #27 ENSPCOG00000019189 ENSPCOG00000028357 #30 CARD18 (ENSPCOG00000012524) #31 GRIA4 (ENSPCOG00000028018) #33 MSANTD4 (ENSPCOG00000023276) #34 KBTBD3 (ENSPCOG00000021176) #35 AASDHPPT (ENSPCOG00000014297) #36 GUCY1A2 (ENSPCOG00000016375) ENSPCOG00000015897 CWF19L2 (ENSPCOG00000018032) ALKBH8 (ENSPCOG00000022645) ELMOD1 (ENSPCOG00000023055) Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000162428.b ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 ENSGT00940000168471 Glires ANCESTRAL SPECIES 1 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000162428.b ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 ENSGT00940000168471 Lagomorpha ANCESTRAL SPECIES 5 ENSGT00940000161966 ENSGT00390000013786 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000162428.b ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000158563 ENSGT00390000008536 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E Pika DUPLICATION Pika DUPLICATION Pika MODERN SPECIES 2838 ENSOPRG00000007743 #21 ENSOPRG00000018732 #22 ENSOPRG00000010701 #22 ENSOPRG00000016082 #22 Pika MODERN SPECIES 2838 ENSOPRG00000007743 #21 ENSOPRG00000018732 #22 ENSOPRG00000010701 #22 ENSOPRG00000016082 #22 Pika MODERN SPECIES 2838 ENSOPRG00000007743 #21 ENSOPRG00000018732 #22 ENSOPRG00000010701 #22 ENSOPRG00000016082 #22 Rabbit MODERN SPECIES BIRC3 (ENSOCUG00000010109) #8 BIRC2 (ENSOCUG00000013890) #9 ENSOCUG00000006165 #10 MMP7 (ENSOCUG00000015329) #11 MMP20 (ENSOCUG00000002930) #12 MMP27 (ENSOCUG00000001090) #13 MMP8 (ENSOCUG00000001092) #15 MMP10 (ENSOCUG00000021775) #16 MMP1 (ENSOCUG00000017958) #17 MMP3 (ENSOCUG00000029337) #18 MMP12 (ENSOCUG00000008303) #19 ENSOCUG00000011333 ENSOCUG00000029729 MMP13 (ENSOCUG00000002481) #20 DCUN1D5 (ENSOCUG00000006512) #21 DYNC2H1 (ENSOCUG00000016257) #22 DDI1 (ENSOCUG00000015321) #24 PDGFD (ENSOCUG00000015312) #23 ENSOCUG00000007503 #27 ENSOCUG00000001103 #30 ENSOCUG00000029247 GRIA4 (ENSOCUG00000001089) #33 MSANTD4 (ENSOCUG00000022457) #34 KBTBD3 (ENSOCUG00000000230) #35 AASDHPPT (ENSOCUG00000000231) #36 ENSOCUG00000023190 ENSOCUG00000036599 GUCY1A2 (ENSOCUG00000004490) ENSOCUG00000038405 CWF19L2 (ENSOCUG00000025398) ELMOD1 (ENSOCUG00000011869) Rodentia ANCESTRAL SPECIES 1 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Rodentia_A ANCESTRAL SPECIES 1 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Sciuridae ANCESTRAL SPECIES 2 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162428.b ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a ENSGT00940000159933 Marmotini ANCESTRAL SPECIES 20 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b.e #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162428.b ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a ENSGT00940000159933 Marmotini_b ANCESTRAL SPECIES 122 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b.e #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162428.b ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a ENSGT00940000159933 Squirrel MODERN SPECIES 151 YAP1 (ENSSTOG00000004960) #7 BIRC3 (ENSSTOG00000005734) #8 ENSSTOG00000005754 #9 ENSSTOG00000026499 TMEM123 (ENSSTOG00000032785) #10 MMP7 (ENSSTOG00000027961) #11 MMP20 (ENSSTOG00000023437) #12 MMP27 (ENSSTOG00000008513) #13 MMP8 (ENSSTOG00000008539) #15 ENSSTOG00000008555 #18 MMP1 (ENSSTOG00000008571) #17 MMP3 (ENSSTOG00000008584) #18 MMP12 (ENSSTOG00000008600) #19 MMP13 (ENSSTOG00000008612) #20 DCUN1D5 (ENSSTOG00000013580) #21 DYNC2H1 (ENSSTOG00000026849) #22 DDI1 (ENSSTOG00000004248) #24 PDGFD (ENSSTOG00000004230) #23 ENSSTOG00000002855 ENSSTOG00000007964 #30 GRIA4 (ENSSTOG00000000265) #33 MSANTD4 (ENSSTOG00000027044) #34 KBTBD3 (ENSSTOG00000001079) #35 AASDHPPT (ENSSTOG00000000268) #36 GUCY1A2 (ENSSTOG00000013157) ENSSTOG00000027350 ENSSTOG00000033115 ALKBH8 (ENSSTOG00000024939) ELMOD1 (ENSSTOG00000001237) ENSSTOG00000001241 SLC35F2 (ENSSTOG00000011321) Arctic ground squirrel MODERN SPECIES 103 CEP126 (ENSUPAG00010019487) CFAP300 (ENSUPAG00010019501) YAP1 (ENSUPAG00010019515) #7 BIRC3 (ENSUPAG00010019528) #8 BIRC2 (ENSUPAG00010019549) #9 TMEM123 (ENSUPAG00010019562) #10 MMP7 (ENSUPAG00010019569) #11 MMP20 (ENSUPAG00010019573) #12 MMP27 (ENSUPAG00010019583) #13 MMP8 (ENSUPAG00010019593) #15 MMP3 (ENSUPAG00010019608) #18 MMP1 (ENSUPAG00010019633) #17 MMP12 (ENSUPAG00010019655) #19 MMP13 (ENSUPAG00010019662) #20 DCUN1D5 (ENSUPAG00010019672) #21 DYNC2H1 (ENSUPAG00010019688) #22 PDGFD (ENSUPAG00010019962) #23 DDI1 (ENSUPAG00010019982) #24 ENSUPAG00010019986 ENSUPAG00010019990 #30 ENSUPAG00010020000 Alpin marmot MODERN SPECIES 25 CFAP300 (ENSMMMG00000002751) YAP1 (ENSMMMG00000002718) #7 BIRC3 (ENSMMMG00000002693) #8 ENSMMMG00000002595 #9 TMEM123 (ENSMMMG00000002579) #10 MMP7 (ENSMMMG00000002551) #11 MMP20 (ENSMMMG00000002519) #12 MMP27 (ENSMMMG00000002490) #13 MMP8 (ENSMMMG00000002471) #15 ENSMMMG00000002452 #18 MMP1 (ENSMMMG00000002402) #17 MMP3 (ENSMMMG00000002377) #18 MMP12 (ENSMMMG00000002359) #19 MMP13 (ENSMMMG00000002337) #20 DCUN1D5 (ENSMMMG00000002318) #21 DYNC2H1 (ENSMMMG00000001718) #22 ENSMMMG00000001663 ENSMMMG00000001653 DDI1 (ENSMMMG00000001629) #24 PDGFD (ENSMMMG00000001580) #23 ENSMMMG00000001554 ENSMMMG00000001523 #30 ENSMMMG00000001357 ENSMMMG00000001339 GRIA4 (ENSMMMG00000001185) #33 MSANTD4 (ENSMMMG00000001156) #34 KBTBD3 (ENSMMMG00000001143) #35 AASDHPPT (ENSMMMG00000001128) #36 ENSMMMG00000001082 CWF19L2 (ENSMMMG00000001043) ALKBH8 (ENSMMMG00000000941) Eurasian red squirrel MODERN SPECIES 2 CFAP300 (ENSSVLG00005013383) YAP1 (ENSSVLG00005013738) #7 BIRC3 (ENSSVLG00005013872) #8 BIRC2 (ENSSVLG00005013957) #9 TMEM123 (ENSSVLG00005014049) #10 MMP7 (ENSSVLG00005014206) #11 MMP20 (ENSSVLG00005014300) #12 MMP27 (ENSSVLG00005014388) #13 MMP8 (ENSSVLG00005014523) #15 MMP10 (ENSSVLG00005014643) #16 MMP1 (ENSSVLG00005014774) #17 MMP3 (ENSSVLG00005014901) #18 MMP12 (ENSSVLG00005015038) #19 MMP13 (ENSSVLG00005015162) #20 DCUN1D5 (ENSSVLG00005015275) #21 DYNC2H1 (ENSSVLG00005015721) #22 ENSSVLG00005018071 ENSSVLG00005018153 PDGFD (ENSSVLG00005018195) #23 DDI1 (ENSSVLG00005018324) #24 ENSSVLG00005018358 ENSSVLG00005018566 #30 ENSSVLG00005019096 GRIA4 (ENSSVLG00005019563) #33 MSANTD4 (ENSSVLG00005019923) #34 KBTBD3 (ENSSVLG00005019983) #35 AASDHPPT (ENSSVLG00005020020) #36 ENSSVLG00005020058 GUCY1A2 (ENSSVLG00005020104) CWF19L2 (ENSSVLG00005020205) ENSSVLG00005020267 Hystricomorpha ANCESTRAL SPECIES 5 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a Hystricomorpha_a ANCESTRAL SPECIES 10 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a Hystricomorpha_b ANCESTRAL SPECIES 23 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a Long-tailed chinchilla MODERN SPECIES 119 CEP126 (ENSCLAG00000012819) CFAP300 (ENSCLAG00000013914) YAP1 (ENSCLAG00000011113) #7 BIRC3 (ENSCLAG00000010783) #8 BIRC2 (ENSCLAG00000013394) #9 MMP7 (ENSCLAG00000015356) #11 MMP20 (ENSCLAG00000013214) #12 MMP27 (ENSCLAG00000010798) #13 MMP8 (ENSCLAG00000014040) #15 MMP10 (ENSCLAG00000013443) #16 MMP1 (ENSCLAG00000011491) #17 MMP3 (ENSCLAG00000012886) #18 MMP12 (ENSCLAG00000014288) #19 MMP13 (ENSCLAG00000011293) #20 DCUN1D5 (ENSCLAG00000010606) #21 DYNC2H1 (ENSCLAG00000014268) #22 PDGFD (ENSCLAG00000013637) #23 DDI1 (ENSCLAG00000014263) #24 ENSCLAG00000015891 #25 ENSCLAG00000012832 #27 ENSCLAG00000015719 #30 GRIA4 (ENSCLAG00000012261) #33 MSANTD4 (ENSCLAG00000016121) #34 KBTBD3 (ENSCLAG00000014468) #35 AASDHPPT (ENSCLAG00000015434) #36 GUCY1A2 (ENSCLAG00000017060) CWF19L2 (ENSCLAG00000013844) ENSCLAG00000015715 ENSCLAG00000011087 ELMOD1 (ENSCLAG00000011927) ENSCLAG00000011651 Degu MODERN SPECIES 53 CFAP300 (ENSODEG00000014307) ENSODEG00000013051 YAP1 (ENSODEG00000012897) #7 ENSODEG00000012579 ENSODEG00000013275 #8 ENSODEG00000012602 #9 MMP7 (ENSODEG00000012568) #11 MMP20 (ENSODEG00000012590) #12 MMP27 (ENSODEG00000012636) #13 MMP8 (ENSODEG00000013316) #15 MMP10 (ENSODEG00000014848) #16 MMP3 (ENSODEG00000012755) #18 MMP12 (ENSODEG00000012714) #19 MMP13 (ENSODEG00000012128) #20 DCUN1D5 (ENSODEG00000012893) #21 DYNC2H1 (ENSODEG00000012699) #22 DDI1 (ENSODEG00000011789) #24 PDGFD (ENSODEG00000011848) #23 ENSODEG00000012044 #25 ENSODEG00000011629 #27 ENSODEG00000013241 #30 GRIA4 (ENSODEG00000012048) #33 MSANTD4 (ENSODEG00000011017) #34 KBTBD3 (ENSODEG00000012092) #35 ENSODEG00000011994 #36 ENSODEG00000012492 ENSODEG00000013543 ALKBH8 (ENSODEG00000011567) ENSODEG00000020136 ELMOD1 (ENSODEG00000015056) SLC35F2 (ENSODEG00000012070) Guinea pig MODERN SPECIES 19 CEP126 (ENSCPOG00000001844) CFAP300 (ENSCPOG00000011737) YAP1 (ENSCPOG00000033105) #7 BIRC3 (ENSCPOG00000034907) #8 BIRC2 (ENSCPOG00000010349) #9 ENSCPOG00000038069 #11 MMP20 (ENSCPOG00000036970) #12 MMP27 (ENSCPOG00000035593) #13 MMP8 (ENSCPOG00000013813) #15 MMP10 (ENSCPOG00000035812) #16 MMP1 (ENSCPOG00000006548) #17 MMP3 (ENSCPOG00000033163) #18 MMP12 (ENSCPOG00000036913) #19 MMP13 (ENSCPOG00000000221) #20 DCUN1D5 (ENSCPOG00000036831) #21 DYNC2H1 (ENSCPOG00000014189) #22 PDGFD (ENSCPOG00000038919) #23 DDI1 (ENSCPOG00000000861) #24 CASP12 (ENSCPOG00000035596) #25 ENSCPOG00000011825 #27 ENSCPOG00000026333 #30 ENSCPOG00000009512 #27 GRIA4 (ENSCPOG00000001062) #33 MSANTD4 (ENSCPOG00000033859) #34 KBTBD3 (ENSCPOG00000003792) #35 AASDHPPT (ENSCPOG00000030678) #36 ENSCPOG00000040462 GUCY1A2 (ENSCPOG00000000335) B3GAT1 (ENSCPOG00000023573) GLB1L2 (ENSCPOG00000000945) GLB1L3 (ENSCPOG00000034065) Naked mole-rat female MODERN SPECIES 24 TRPC6 (ENSHGLG00000000680) PGR (ENSHGLG00000001843) ENSHGLG00000000253 ENSHGLG00000002861 ENSHGLG00000003321 #13 MMP8 (ENSHGLG00000003235) #15 MMP10 (ENSHGLG00000003158) #16 MMP1 (ENSHGLG00000002821) #17 MMP3 (ENSHGLG00000001578) #18 MMP12 (ENSHGLG00000001493) #19 ENSHGLG00000042652 ENSHGLG00000016013 MMP13 (ENSHGLG00000000539) #20 ENSHGLG00000000439 #21 ENSHGLG00000000377 ENSHGLG00000001041 #22 ENSHGLG00000026082 ENSHGLG00000001157 DDI1 (ENSHGLG00000019795) #24 PDGFD (ENSHGLG00000050700) #23 ENSHGLG00000002176 ENSHGLG00000002557 #25 ENSHGLG00000000369 #27 ENSHGLG00000000196 #30 ENSHGLG00000034907 GRIA4 (ENSHGLG00000007205) #33 MSANTD4 (ENSHGLG00000015607) #34 KBTBD3 (ENSHGLG00000015784) #35 ENSHGLG00000015842 #36 ENSHGLG00000042979 GUCY1A2 (ENSHGLG00000017468) Rodentia_B ANCESTRAL SPECIES 23 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Kangaroo rat MODERN SPECIES 329 Msantd2 (ENSDORG00000002743) Esam (ENSDORG00000028051) Vsig2 (ENSDORG00000002740) Nrgn (ENSDORG00000002739) Spa17 (ENSDORG00000023533) Siae (ENSDORG00000002735) Tbrg1 (ENSDORG00000002733) Panx3 (ENSDORG00000002966) ENSDORG00000027724 ENSDORG00000024857 ENSDORG00000027698 ENSDORG00000027629 ENSDORG00000024038 Or8b8 (ENSDORG00000027079) Dcun1d5 (ENSDORG00000001635) #21 Dync2h1 (ENSDORG00000010115) #22 Pdgfd (ENSDORG00000014006) #23 Ddi1 (ENSDORG00000002404) #24 Casp4 (ENSDORG00000016256) Casp1 (ENSDORG00000016257) #30 ENSDORG00000023554 #33 Msantd4 (ENSDORG00000023419) #34 Kbtbd3 (ENSDORG00000012680) #35 Aasdhppt (ENSDORG00000012684) #36 Gucy1a2 (ENSDORG00000007568) ENSDORG00000008595 Alkbh8 (ENSDORG00000008596) Elmod1 (ENSDORG00000008597) Sln (ENSDORG00000026414) Slc35f2 (ENSDORG00000016340) Rab39 (ENSDORG00000026121) Myomorpha ANCESTRAL SPECIES 23 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Lesser Egyptian jerboa MODERN SPECIES 87 Cfap300 (ENSJJAG00000022122) ENSJJAG00000015982 ENSJJAG00000010414 #7 ENSJJAG00000021580 #8 ENSJJAG00000017306 #9 Tmem123 (ENSJJAG00000014178) #10 Mmp7 (ENSJJAG00000009326) #11 Mmp20 (ENSJJAG00000020407) #12 Mmp27 (ENSJJAG00000011497) #13 Mmp8 (ENSJJAG00000021566) #15 ENSJJAG00000020496 #16 ENSJJAG00000010013 #17 Mmp12 (ENSJJAG00000019762) #19 Mmp13 (ENSJJAG00000013818) #20 Dcun1d5 (ENSJJAG00000004999) #21 Dync2h1 (ENSJJAG00000000557) #22 ENSJJAG00000016889 Ddi1 (ENSJJAG00000000750) #24 Pdgfd (ENSJJAG00000020441) #23 Muroidea ANCESTRAL SPECIES 29 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Upper Galilee mountains blind mole rat MODERN SPECIES 401 Birc2 (ENSNGAG00000011071) #9 ENSNGAG00000000138 #10 Mmp7 (ENSNGAG00000000983) #11 Mmp20 (ENSNGAG00000001298) #12 Mmp27 (ENSNGAG00000001467) #13 Mmp8 (ENSNGAG00000009311) #15 ENSNGAG00000011580 #16 ENSNGAG00000012427 #17 Mmp3 (ENSNGAG00000008287) #18 Mmp12 (ENSNGAG00000012323) #19 Mmp13 (ENSNGAG00000013401) #20 Dcun1d5 (ENSNGAG00000013687) #21 Dync2h1 (ENSNGAG00000000125) #22 Pdgfd (ENSNGAG00000016717) #23 Muroidea_A ANCESTRAL SPECIES 23 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 Murinae ANCESTRAL SPECIES 3 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000159759 #18 ENSGT00940000154907.b.m #17 ENSGT00940000154907.b.n #17 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 Mus ANCESTRAL SPECIES 4 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000159759 #18 ENSGT00940000154907.b.m #17 ENSGT00940000154907.b.n #17 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 Mus_A ANCESTRAL SPECIES 4 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000159759 #18 ENSGT00940000154907.b.m #17 ENSGT00940000154907.b.n #17 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 Mus_B ANCESTRAL SPECIES 3 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000159759 #18 ENSGT00940000154907.b.m #17 ENSGT00940000154907.b.n #17 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 Mus_C ANCESTRAL SPECIES 8 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000159759 #18 ENSGT00940000154907.b.m #17 ENSGT00940000154907.b.n #17 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 spretus MODERN SPECIES 18 Yap1 (MGP_SPRETEiJ_G0032883) #7 Birc3 (MGP_SPRETEiJ_G0032882) #8 MGP_SPRETEiJ_G0032881 #9 Tmem123 (MGP_SPRETEiJ_G0032880) #10 Mmp7 (MGP_SPRETEiJ_G0032879) #11 Mmp20 (MGP_SPRETEiJ_G0032878) #12 Mmp27 (MGP_SPRETEiJ_G0032877) #13 Mmp8 (MGP_SPRETEiJ_G0032876) #15 MGP_SPRETEiJ_G0032875 #18 MGP_SPRETEiJ_G0032874 #17 MGP_SPRETEiJ_G0032873 #17 MGP_SPRETEiJ_G0032872 #18 Mmp12 (MGP_SPRETEiJ_G0032871) #19 Mmp13 (MGP_SPRETEiJ_G0032870) #20 MGP_SPRETEiJ_G0032869 #21 Dync2h1 (MGP_SPRETEiJ_G0032868) #22 Ddi1 (MGP_SPRETEiJ_G0032867) #24 Pdgfd (MGP_SPRETEiJ_G0032866) #23 Casp12 (MGP_SPRETEiJ_G0032865) #25 Casp4 (MGP_SPRETEiJ_G0032864) Casp1 (MGP_SPRETEiJ_G0032863) #30 Gria4 (MGP_SPRETEiJ_G0032862) #33 Msantd4 (MGP_SPRETEiJ_G0032861) #34 Kbtbd3 (MGP_SPRETEiJ_G0032860) #35 Aasdhppt (MGP_SPRETEiJ_G0032859) #36 Gucy1a2 (MGP_SPRETEiJ_G0032858) Cwf19l2 (MGP_SPRETEiJ_G0032857) Alkbh8 (MGP_SPRETEiJ_G0032856) Steppe mouse MODERN SPECIES 3057 Mmp7 (ENSMSIG00000018503) #11 Mmp20 (ENSMSIG00000018527) #12 Mmp27 (ENSMSIG00000018549) #13 Mmp8 (ENSMSIG00000018618) #15 Mmp10 (ENSMSIG00000018646) #18 Mmp1a (ENSMSIG00000018671) #17 Mmp3 (ENSMSIG00000018686) #18 Mmp1b (ENSMSIG00000018722) #17 Mmp12 (ENSMSIG00000018748) #19 ENSMSIG00000018840 Mmp13 (ENSMSIG00000018843) #20 Dcun1d5 (ENSMSIG00000018871) #21 Dync2h1 (ENSMSIG00000018981) #22 Pdgfd (ENSMSIG00000019889) #23 Ddi1 (ENSMSIG00000019916) #24 Mouse MODERN SPECIES 18 Yap1 (ENSMUSG00000053110) #7 Birc3 (ENSMUSG00000032000) #8 Birc2 (ENSMUSG00000057367) #9 Tmem123 (ENSMUSG00000050912) #10 Mmp7 (ENSMUSG00000018623) #11 Mmp20 (ENSMUSG00000018620) #12 Mmp27 (ENSMUSG00000070323) #13 Mmp8 (ENSMUSG00000005800) #15 Mmp10 (ENSMUSG00000047562) #18 Mmp1a (ENSMUSG00000043089) #17 Mmp3 (ENSMUSG00000043613) #18 Mmp1b (ENSMUSG00000041620) #17 Mmp12 (ENSMUSG00000049723) #19 Mmp13 (ENSMUSG00000050578) #20 Dcun1d5 (ENSMUSG00000032002) #21 Dync2h1 (ENSMUSG00000047193) #22 Ddi1 (ENSMUSG00000047619) #24 Pdgfd (ENSMUSG00000032006) #23 Casp12 (ENSMUSG00000025887) #25 Casp4 (ENSMUSG00000033538) Casp1 (ENSMUSG00000025888) #30 Gria4 (ENSMUSG00000025892) #33 Msantd4 (ENSMUSG00000041124) #34 Kbtbd3 (ENSMUSG00000025893) #35 Aasdhppt (ENSMUSG00000025894) #36 Gucy1a2 (ENSMUSG00000041624) Cwf19l2 (ENSMUSG00000025898) Alkbh8 (ENSMUSG00000025899) Ryukyu mouse MODERN SPECIES 18 Yap1 (MGP_CAROLIEiJ_G0031763) #7 MGP_CAROLIEiJ_G0031762 #8 MGP_CAROLIEiJ_G0031761 ##9 Tmem123 (MGP_CAROLIEiJ_G0031760) #10 Mmp7 (MGP_CAROLIEiJ_G0031759) #11 Mmp20 (MGP_CAROLIEiJ_G0031758) #12 Mmp27 (MGP_CAROLIEiJ_G0031757) #13 Mmp8 (MGP_CAROLIEiJ_G0031756) #15 Mmp10 (MGP_CAROLIEiJ_G0031755) #18 Mmp1a (MGP_CAROLIEiJ_G0031754) #17 Mmp1b (MGP_CAROLIEiJ_G0031753) #17 Mmp3 (MGP_CAROLIEiJ_G0031752) #18 Mmp12 (MGP_CAROLIEiJ_G0031751) #19 Mmp13 (MGP_CAROLIEiJ_G0031750) #20 MGP_CAROLIEiJ_G0031749 #21 Dync2h1 (MGP_CAROLIEiJ_G0031748) #22 Ddi1 (MGP_CAROLIEiJ_G0031747) #24 Pdgfd (MGP_CAROLIEiJ_G0031746) #23 Casp12 (MGP_CAROLIEiJ_G0031745) #25 Casp4 (MGP_CAROLIEiJ_G0031744) Casp1 (MGP_CAROLIEiJ_G0031743) #30 Gria4 (MGP_CAROLIEiJ_G0031742) #33 Msantd4 (MGP_CAROLIEiJ_G0031741) #34 Kbtbd3 (MGP_CAROLIEiJ_G0031740) #35 Aasdhppt (MGP_CAROLIEiJ_G0031739) #36 Gucy1a2 (MGP_CAROLIEiJ_G0031738) Cwf19l2 (MGP_CAROLIEiJ_G0031737) Shrew mouse MODERN SPECIES 1 Cfap300 (MGP_PahariEiJ_G0014642) Yap1 (MGP_PahariEiJ_G0014641) #7 Birc3 (MGP_PahariEiJ_G0014640) #8 MGP_PahariEiJ_G0014639 Tmem123 (MGP_PahariEiJ_G0014638) #10 Mmp7 (MGP_PahariEiJ_G0014637) #11 Mmp20 (MGP_PahariEiJ_G0014636) #12 Mmp27 (MGP_PahariEiJ_G0014635) #13 Mmp8 (MGP_PahariEiJ_G0014634) #15 Mmp10 (MGP_PahariEiJ_G0014633) #18 Mmp3 (MGP_PahariEiJ_G0014632) #18 Mmp1b (MGP_PahariEiJ_G0014631) #17 Mmp12 (MGP_PahariEiJ_G0014630) #19 Mmp13 (MGP_PahariEiJ_G0014629) #20 MGP_PahariEiJ_G0014628 #21 Dync2h1 (MGP_PahariEiJ_G0014627) #22 Ddi1 (MGP_PahariEiJ_G0014626) #24 Pdgfd (MGP_PahariEiJ_G0014625) #23 MGP_PahariEiJ_G0014624 #25 Casp4 (MGP_PahariEiJ_G0014623) Casp1 (MGP_PahariEiJ_G0014622) #30 Gria4 (MGP_PahariEiJ_G0014621) #33 Msantd4 (MGP_PahariEiJ_G0014620) #34 Kbtbd3 (MGP_PahariEiJ_G0014619) #35 Aasdhppt (MGP_PahariEiJ_G0014618) #36 Gucy1a2 (MGP_PahariEiJ_G0014617) Cwf19l2 (MGP_PahariEiJ_G0014616) Alkbh8 (MGP_PahariEiJ_G0014615) Rat MODERN SPECIES 18 Yap1 (ENSRNOG00000005933) #7 Birc3 (ENSRNOG00000005731) #8 Birc2 (ENSRNOG00000010602) #9 Tmem123 (ENSRNOG00000010584) #10 Mmp7 (ENSRNOG00000010507) #11 Mmp20 (ENSRNOG00000021896) #12 Mmp27 (ENSRNOG00000040208) #13 Mmp8 (ENSRNOG00000009907) #15 Mmp10 (ENSRNOG00000032832) #18 Mmp1 (ENSRNOG00000032353) #17 Mmp3 (ENSRNOG00000032626) #18 Mmp1b (ENSRNOG00000008881) #17 Mmp12 (ENSRNOG00000030187) #19 Mmp13 (ENSRNOG00000008478) #20 Dcun1d5 (ENSRNOG00000008390) #21 Dync2h1 (ENSRNOG00000032070) #22 Ddi1 (ENSRNOG00000022081) #24 ENSRNOG00000065876 Pdgfd (ENSRNOG00000029148) #23 ENSRNOG00000066836 ENSRNOG00000069423 Casp12 (ENSRNOG00000033434) #25 Casp4 (ENSRNOG00000033697) Casp1 (ENSRNOG00000007372) #30 Gria4 (ENSRNOG00000006957) #33 Msantd4 (ENSRNOG00000022245) #34 Kbtbd3 (ENSRNOG00000069206) #35 Aasdhppt (ENSRNOG00000005795) #36 ENSRNOG00000066855 AABR07068905.1 (ENSRNOG00000062096) Gucy1a2 (ENSRNOG00000029876) Cricetidae ANCESTRAL SPECIES 4 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759.h #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 Cricetidae_B ANCESTRAL SPECIES 58 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759.h #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 Northern American deer mouse MODERN SPECIES 20 Cfap300 (ENSPEMG00000021710) Yap1 (ENSPEMG00000022927) #7 Birc3 (ENSPEMG00000020508) #8 Birc2 (ENSPEMG00000018476) #9 Tmem123 (ENSPEMG00000023085) #10 Mmp7 (ENSPEMG00000021337) #11 Mmp20 (ENSPEMG00000011175) #12 Mmp27 (ENSPEMG00000024216) #13 Mmp8 (ENSPEMG00000022864) #15 Mmp10 (ENSPEMG00000021262) #18 ENSPEMG00000020690 #17 Mmp3 (ENSPEMG00000020327) #18 Mmp12 (ENSPEMG00000020371) #19 Mmp13 (ENSPEMG00000011633) #20 Dcun1d5 (ENSPEMG00000020877) #21 Dync2h1 (ENSPEMG00000016383) #22 Pdgfd (ENSPEMG00000013246) #23 ENSPEMG00000028818 ENSPEMG00000021102 Casp12 (ENSPEMG00000022171) #25 ENSPEMG00000008389 #30 ENSPEMG00000026130 #30 ENSPEMG00000025268 ENSPEMG00000025774 Gria4 (ENSPEMG00000005300) #33 Msantd4 (ENSPEMG00000029468) #34 Kbtbd3 (ENSPEMG00000029070) #35 Aasdhppt (ENSPEMG00000016551) #36 ENSPEMG00000025699 Gucy1a2 (ENSPEMG00000021986) Cwf19l2 (ENSPEMG00000022399) Prairie vole MODERN SPECIES 13 Cfap300 (ENSMOCG00000013197) Yap1 (ENSMOCG00000007486) #7 Birc3 (ENSMOCG00000013964) #8 Birc2 (ENSMOCG00000010117) #9 Tmem123 (ENSMOCG00000021990) #10 Mmp7 (ENSMOCG00000021222) #11 Mmp20 (ENSMOCG00000019578) #12 Mmp27 (ENSMOCG00000018511) #13 Mmp8 (ENSMOCG00000009399) #15 ENSMOCG00000007239 #16 ENSMOCG00000023030 #17 Mmp3 (ENSMOCG00000006156) #18 Mmp12 (ENSMOCG00000020347) #19 Mmp13 (ENSMOCG00000010248) #20 Dcun1d5 (ENSMOCG00000008925) #21 Dync2h1 (ENSMOCG00000017521) #22 Pdgfd (ENSMOCG00000014518) #23 Casp1 (ENSMOCG00000019444) #30 ENSMOCG00000004515 Gria4 (ENSMOCG00000011931) #33 Cricetinae ANCESTRAL SPECIES 45 ENSGT01060000248588.a.d.a ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759.h #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000156079 ENSGT00940000159308 Golden Hamster MODERN SPECIES 688 Cntn5 (ENSMAUG00000012675) Arhgap42 (ENSMAUG00000012529) Pgr (ENSMAUG00000019127) Trpc6 (ENSMAUG00000014533) Cep126 (ENSMAUG00000013444) Cfap300 (ENSMAUG00000011879) Birc2 (ENSMAUG00000018063) #9 ENSMAUG00000016756 #18 Mmp20 (ENSMAUG00000011367) #12 Mmp27 (ENSMAUG00000000778) #13 ENSMAUG00000009988 #17 Mmp3 (ENSMAUG00000011335) #18 Mmp12 (ENSMAUG00000008249) #19 Mmp13 (ENSMAUG00000001270) #20 Dcun1d5 (ENSMAUG00000011071) #21 Dync2h1 (ENSMAUG00000015798) #22 Pdgfd (ENSMAUG00000012917) #23 Ddi1 (ENSMAUG00000016614) #24 Casp1 (ENSMAUG00000010193) #30 ENSMAUG00000016775 #33 Msantd4 (ENSMAUG00000009891) #34 Kbtbd3 (ENSMAUG00000009346) #35 ENSMAUG00000008521 #36 Gucy1a2 (ENSMAUG00000011689) ENSMAUG00000008207 Or7g16 (ENSMAUG00000000891) Or7g30 (ENSMAUG00000010230) Or7g32 (ENSMAUG00000009330) ENSMAUG00000007695 ENSMAUG00000012374 Or7d11 (ENSMAUG00000016586) Chinese hamster chok1gshd MODERN SPECIES 202 Birc3 (ENSCGRG00001008505) #8 Birc2 (ENSCGRG00001023266) #9 ENSCGRG00001022513 Tmem123 (ENSCGRG00001018797) #10 ENSCGRG00001015482 #20 Mmp20 (ENSCGRG00001000330) #12 Mmp27 (ENSCGRG00001021757) #13 Mmp8 (ENSCGRG00001015038) #15 ENSCGRG00001014094 #16 ENSCGRG00001020530 #17 ENSCGRG00001009381 Mmp3 (ENSCGRG00001015501) #18 Mmp12 (ENSCGRG00001013053) #19 Mmp13 (ENSCGRG00001006492) #20 Dcun1d5 (ENSCGRG00001014535) #21 Dync2h1 (ENSCGRG00001013236) #22 Ddi1 (ENSCGRG00001005855) #24 Pdgfd (ENSCGRG00001019661) #23 ENSCGRG00001004505 Casp12 (ENSCGRG00001018352) #25 Casp1 (ENSCGRG00001009135) #30 Gria4 (ENSCGRG00001016770) #33 Msantd4 (ENSCGRG00001019387) #34 Kbtbd3 (ENSCGRG00001018771) #35 ENSCGRG00001018331 #36 Gucy1a2 (ENSCGRG00001016426) Cwf19l2 (ENSCGRG00001010585) Alkbh8 (ENSCGRG00001011248) Fam135b (ENSCGRG00001009898) Col22a1 (ENSCGRG00001011324) ENSCGRG00001022989 Tree shrew DUPLICATION Tree shrew MODERN SPECIES 4711 ENSTBEG00000009456 #22 Tree shrew MODERN SPECIES 1791 MMP20 (ENSTBEG00000014473) #12 MMP27 (ENSTBEG00000015035) #13 MMP8 (ENSTBEG00000015520) #15 MMP10 (ENSTBEG00000016136) #16 MMP1 (ENSTBEG00000017080) #17 MMP3 (ENSTBEG00000017424) #18 MMP12 (ENSTBEG00000009604) #19 MMP13 (ENSTBEG00000009968) #20 DCUN1D5 (ENSTBEG00000010532) #21 ENSTBEG00000011130 #22 Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000162428.b ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 Eulipotyphla ANCESTRAL SPECIES 2205 ENSGT00940000156155 #21 ENSGT00940000154620 #22 Hedgehog DUPLICATION Hedgehog MODERN SPECIES 7865 ENSEEUG00000012605 #22 ENSEEUG00000012670 #22 Hedgehog MODERN SPECIES 7865 ENSEEUG00000012605 #22 ENSEEUG00000012670 #22 Common shrew DUPLICATION Common shrew MODERN SPECIES 2637 DCUN1D5 (ENSSARG00000003213) #21 ENSSARG00000003244 #22 ENSSARG00000003282 #22 Common shrew MODERN SPECIES 2637 DCUN1D5 (ENSSARG00000003213) #21 ENSSARG00000003244 #22 ENSSARG00000003282 #22 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000162428.b ENSGT01030000234886 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 Artiodactyla ANCESTRAL SPECIES 1 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT01040000240879 Suina ANCESTRAL SPECIES 5 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00910000148412 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 ENSGT00390000015655.a Pig MODERN SPECIES 17 CFAP300 (ENSSSCG00000014980) YAP1 (ENSSSCG00000031429) #7 BIRC3 (ENSSSCG00000027529) #8 BIRC2 (ENSSSCG00000063374) #9 ENSSSCG00000031170 #10 MMP7 (ENSSSCG00000014982) #11 MMP20 (ENSSSCG00000014983) #12 MMP27 (ENSSSCG00000014984) #13 MMP8 (ENSSSCG00000029675) #15 MMP1 (ENSSSCG00000014985) #17 MMP3 (ENSSSCG00000059078) #18 MMP12 (ENSSSCG00000014987) #19 MMP13 (ENSSSCG00000014988) #20 ENSSSCG00000035427 DCUN1D5 (ENSSSCG00000014989) #21 DYNC2H1 (ENSSSCG00000033937) #22 PDGFD (ENSSSCG00000014994) #23 DDI1 (ENSSSCG00000014995) #24 ENSSSCG00000032358 ENSSSCG00000014996 #25 ENSSSCG00000014997 #27 CASP1 (ENSSSCG00000028711) #30 ENSSSCG00000037097 GRIA4 (ENSSSCG00000030565) #33 MSANTD4 (ENSSSCG00000026833) #34 AASDHPPT (ENSSSCG00000014998) #36 KBTBD3 (ENSSSCG00000014999) #35 CWF19L2 (ENSSSCG00000028201) ENSSSCG00000056752 ALKBH8 (ENSSSCG00000024628) ELMOD1 (ENSSSCG00000015002) Chacoan peccary MODERN SPECIES 29 YAP1 (ENSCWAG00000000439) #7 BIRC3 (ENSCWAG00000000395) #8 BIRC2 (ENSCWAG00000000357) #9 ENSCWAG00000000343 TMEM123 (ENSCWAG00000000329) #10 MMP7 (ENSCWAG00000000312) #11 MMP20 (ENSCWAG00000000288) #12 MMP27 (ENSCWAG00000000250) #13 MMP8 (ENSCWAG00000000204) #15 ENSCWAG00000000098 #17 MMP1 (ENSCWAG00000009665) #17 MMP3 (ENSCWAG00000009566) #18 MMP12 (ENSCWAG00000009480) #19 MMP13 (ENSCWAG00000009364) #20 DCUN1D5 (ENSCWAG00000009255) #21 DYNC2H1 (ENSCWAG00000007039) #22 DDI1 (ENSCWAG00000006891) #24 PDGFD (ENSCWAG00000006820) #23 ENSCWAG00000006786 ENSCWAG00000006740 #27 ENSCWAG00000006028 #30 GRIA4 (ENSCWAG00000005641) #33 MSANTD4 (ENSCWAG00000005595) #34 KBTBD3 (ENSCWAG00000005570) #35 AASDHPPT (ENSCWAG00000005548) #36 CWF19L2 (ENSCWAG00000005525) ALKBH8 (ENSCWAG00000005467) ELMOD1 (ENSCWAG00000005287) ENSCWAG00000005234 SLC35F2 (ENSCWAG00000005147) RAB39A (ENSCWAG00000005118) Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT01040000240879 Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719.a ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000155627 ENSGT00940000157765 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT01040000240879 Cetacea ANCESTRAL SPECIES 4 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000155627 ENSGT00940000157765 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 ENSGT00390000015655.a Odontoceti ANCESTRAL SPECIES 4 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000155627 ENSGT00940000157765 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 ENSGT00390000015655.a Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000155627 ENSGT00940000157765 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 ENSGT00390000015655.a Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00390000015164.v.a.a ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000155627 ENSGT00950000182878.b.b.k.a.a ENSGT00940000157765 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 Monodontidae ANCESTRAL SPECIES 2 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00390000015164.v.a.a ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT01010000222906.b.b.b ENSGT00390000005568.fb.l.b.a ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000155627 ENSGT00950000182878.b.b.k.a.a ENSGT00940000157765 ENSGT00940000158563 Beluga whale MODERN SPECIES 75 MMP20 (ENSDLEG00000012733) #12 MMP27 (ENSDLEG00000012775) #13 MMP8 (ENSDLEG00000012801) #15 MMP1 (ENSDLEG00000012823) #17 MMP3 (ENSDLEG00000012844) #18 MMP13 (ENSDLEG00000012870) #20 DCUN1D5 (ENSDLEG00000012915) #21 DYNC2H1 (ENSDLEG00000013026) #22 ENSDLEG00000014217 ENSDLEG00000014223 PDGFD (ENSDLEG00000014235) #23 DDI1 (ENSDLEG00000014267) #24 ENSDLEG00000014270 #25 ENSDLEG00000014313 #27 CASP1 (ENSDLEG00000014328) #30 GRIA4 (ENSDLEG00000014352) #33 MSANTD4 (ENSDLEG00000014424) #34 KBTBD3 (ENSDLEG00000014428) #35 AASDHPPT (ENSDLEG00000014433) #36 CWF19L2 (ENSDLEG00000014450) GUCY1A2 (ENSDLEG00000014519) Narwhal MODERN SPECIES 314 BIRC3 (ENSMMNG00015017985) #8 BIRC2 (ENSMMNG00015017921) #9 ENSMMNG00015017889 TMEM123 (ENSMMNG00015017867) #10 MMP7 (ENSMMNG00015017833) #11 ENSMMNG00015017789 ENSMMNG00015017752 FOLH1 (ENSMMNG00015016426) MMP20 (ENSMMNG00015016079) #12 MMP27 (ENSMMNG00015016013) #13 MMP8 (ENSMMNG00015015954) #15 MMP1 (ENSMMNG00015015906) #17 MMP3 (ENSMMNG00015015864) #18 MMP13 (ENSMMNG00015015808) #20 DCUN1D5 (ENSMMNG00015015752) #21 DYNC2H1 (ENSMMNG00015015422) #22 ENSMMNG00015015371 DDI1 (ENSMMNG00015015358) #24 PDGFD (ENSMMNG00015015343) #23 CASP12 (ENSMMNG00015015330) #25 ENSMMNG00015015306 #27 ENSMMNG00015015191 #30 ENSMMNG00015015127 GRIA4 (ENSMMNG00015015040) #33 MSANTD4 (ENSMMNG00015014999) #34 KBTBD3 (ENSMMNG00015014990) #35 AASDHPPT (ENSMMNG00015014982) #36 CWF19L2 (ENSMMNG00015014936) ENSMMNG00015014920 GUCY1A2 (ENSMMNG00015014900) ALKBH8 (ENSMMNG00015014868) Vaquita MODERN SPECIES 19 ENSPSNG00000012784 ENSPSNG00000012743 FOLH1 (ENSPSNG00000012683) ENSPSNG00000012601 ENSPSNG00000012185 ENSPSNG00000012055 ENSPSNG00000012017 MMP20 (ENSPSNG00000011898) #12 MMP27 (ENSPSNG00000011758) #13 MMP8 (ENSPSNG00000011640) #15 MMP1 (ENSPSNG00000011516) #17 MMP3 (ENSPSNG00000011464) #18 ENSPSNG00000011394 MMP13 (ENSPSNG00000011272) #20 DCUN1D5 (ENSPSNG00000011176) #21 ENSPSNG00000011129 #22 ENSPSNG00000011106 DDI1 (ENSPSNG00000011079) #24 PDGFD (ENSPSNG00000011015) #23 ENSPSNG00000010961 #25 ENSPSNG00000010712 #27 ENSPSNG00000010097 #30 ENSPSNG00000009923 ENSPSNG00000009900 GRIA4 (ENSPSNG00000009480) #33 MSANTD4 (ENSPSNG00000009351) #34 KBTBD3 (ENSPSNG00000009333) #35 AASDHPPT (ENSPSNG00000009261) #36 CWF19L2 (ENSPSNG00000009225) ENSPSNG00000009179 GUCY1A2 (ENSPSNG00000009108) Dolphin MODERN SPECIES 2448 ENSTTRG00000009305 #22 Sperm whale MODERN SPECIES 7 CEP126 (ENSPCTG00005008482) CFAP300 (ENSPCTG00005008410) YAP1 (ENSPCTG00005008267) #7 BIRC3 (ENSPCTG00005008131) #9 TMEM123 (ENSPCTG00005008095) #10 ENSPCTG00005008079 MMP7 (ENSPCTG00005008052) #11 ENSPCTG00005008033 MMP20 (ENSPCTG00005007995) #12 MMP27 (ENSPCTG00005007950) #13 MMP8 (ENSPCTG00005007904) #15 MMP1 (ENSPCTG00005007864) #17 MMP3 (ENSPCTG00005007829) #18 MMP13 (ENSPCTG00005007790) #20 DCUN1D5 (ENSPCTG00005007734) #21 DYNC2H1 (ENSPCTG00005007602) #22 DDI1 (ENSPCTG00005007507) #24 PDGFD (ENSPCTG00005007471) #23 ENSPCTG00005007398 #27 CASP1 (ENSPCTG00005006753) #30 ENSPCTG00005006571 GRIA4 (ENSPCTG00005006290) #33 MSANTD4 (ENSPCTG00005006230) #34 KBTBD3 (ENSPCTG00005006219) #35 AASDHPPT (ENSPCTG00005006202) #36 CWF19L2 (ENSPCTG00005006064) GUCY1A2 (ENSPCTG00005005964) ENSPCTG00005005948 ALKBH8 (ENSPCTG00005005892) ELMOD1 (ENSPCTG00005005706) ENSPCTG00005005666 Blue whale MODERN SPECIES 19 CFAP300 (ENSBMSG00010007148) YAP1 (ENSBMSG00010007087) #7 BIRC3 (ENSBMSG00010007044) #8 BIRC2 (ENSBMSG00010007026) #9 ENSBMSG00010006981 #10 MMP7 (ENSBMSG00010006965) #11 ENSBMSG00010006936 MMP20 (ENSBMSG00010006883) #12 MMP27 (ENSBMSG00010006850) #13 MMP8 (ENSBMSG00010006829) #15 MMP1 (ENSBMSG00010006797) #17 MMP3 (ENSBMSG00010006771) #18 MMP13 (ENSBMSG00010006744) #20 DCUN1D5 (ENSBMSG00010006711) #21 ENSBMSG00010006692 DYNC2H1 (ENSBMSG00010006610) #22 ENSBMSG00010006519 ENSBMSG00010006513 ENSBMSG00010006504 DDI1 (ENSBMSG00010006488) #24 PDGFD (ENSBMSG00010006472) #23 CASP12 (ENSBMSG00010006435) #25 ENSBMSG00010006394 #27 ENSBMSG00010006210 #30 ENSBMSG00010006162 ENSBMSG00010007668 MSANTD4 (ENSBMSG00010007664) #34 KBTBD3 (ENSBMSG00010007657) #35 AASDHPPT (ENSBMSG00010007644) #36 CWF19L2 (ENSBMSG00010007631) ENSBMSG00010007615 Pecora ANCESTRAL SPECIES 7 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719.a ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j Yarkand deer MODERN SPECIES YAP1 (ENSCHYG00000000950) #7 BIRC3 (ENSCHYG00000000926) #8 BIRC2 (ENSCHYG00000000902) #9 ENSCHYG00000000892 TMEM123 (ENSCHYG00000000870) #10 MMP7 (ENSCHYG00000000857) #11 MMP20 (ENSCHYG00000000837) #12 MMP27 (ENSCHYG00000000792) #13 MMP8 (ENSCHYG00000000770) #15 ENSCHYG00000000747 #17 MMP1 (ENSCHYG00000000723) #17 MMP3 (ENSCHYG00000000701) #18 MMP12 (ENSCHYG00000000688) #19 MMP13 (ENSCHYG00000000652) #20 DCUN1D5 (ENSCHYG00000000628) #21 DYNC2H1 (ENSCHYG00000000537) #22 DDI1 (ENSCHYG00000000457) #24 PDGFD (ENSCHYG00000000341) #23 ENSCHYG00000000233 ENSCHYG00000000211 #27 ENSCHYG00000000171 #30 ENSCHYG00000000131 GRIA4 (ENSCHYG00000000113) #33 MSANTD4 (ENSCHYG00000000065) #34 KBTBD3 (ENSCHYG00000000060) #35 ENSCHYG00000000056 #36 ANKRD49 (ENSCHYG00000000041) MRE11 (ENSCHYG00000000023) GPR83 (ENSCHYG00000000012) IZUMO1R (ENSCHYG00000000006) Percora_a ANCESTRAL SPECIES 6 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719.a ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j Siberian musk deer MODERN SPECIES 1172 YAP1 (ENSMMSG00000019446) #7 ENSMMSG00000020213 ENSMMSG00000020239 #8 ENSMMSG00000020291 #9 ENSMMSG00000020342 ENSMMSG00000020366 #10 MMP7 (ENSMMSG00000020500) #11 MMP20 (ENSMMSG00000020524) #12 MMP27 (ENSMMSG00000020593) #13 MMP8 (ENSMMSG00000020627) #15 MMP1 (ENSMMSG00000020664) #17 MMP3 (ENSMMSG00000020691) #18 MMP12 (ENSMMSG00000020713) #19 MMP13 (ENSMMSG00000020775) #20 DCUN1D5 (ENSMMSG00000020795) #21 DYNC2H1 (ENSMMSG00000020899) #22 ENSMMSG00000008190 ENSMMSG00000008228 ENSMMSG00000008237 PDGFD (ENSMMSG00000008276) #23 DDI1 (ENSMMSG00000008336) #24 ENSMMSG00000008366 #27 ENSMMSG00000008496 #30 GRIA4 (ENSMMSG00000008872) #33 ENSMMSG00000008975 #34 KBTBD3 (ENSMMSG00000009059) #35 AASDHPPT (ENSMMSG00000009083) #36 ANKRD49 (ENSMMSG00000009101) ENSMMSG00000009157 GPR83 (ENSMMSG00000009714) IZUMO1R (ENSMMSG00000009745) Bovidae ANCESTRAL SPECIES 6 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719.a ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000171276 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j ENSGT00940000154976.p.b.b ENSGT00940000154261.q.b.a.a Caprinae ANCESTRAL SPECIES 6 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000171276 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT01030000234886 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j ENSGT00940000154976.p.a Rambouillet Sheep MODERN SPECIES 6 TRPC6 (ENSOARG00020021734) ANGPTL5 (ENSOARG00020021669) CFAP300 (ENSOARG00020021370) YAP1 (ENSOARG00020020483) #7 BIRC3 (ENSOARG00020020405) #8 ENSOARG00020020385 BIRC2 (ENSOARG00020020262) #9 MMP7 (ENSOARG00020020219) #11 MMP7 (ENSOARG00020020127) #11 MMP20 (ENSOARG00020020039) #12 MMP27 (ENSOARG00020020000) #13 MMP8 (ENSOARG00020019912) #15 MMP1 (ENSOARG00020019819) #17 MMP12 (ENSOARG00020019763) #19 DCUN1D5 (ENSOARG00020019585) #21 DYNC2H1 (ENSOARG00020014518) #22 DDI1 (ENSOARG00020014392) #24 PDGFD (ENSOARG00020014159) #23 ENSOARG00020014135 ENSOARG00020013177 #27 ENSOARG00020013115 ENSOARG00020013091 GRIA4 (ENSOARG00020012341) #33 MSANTD4 (ENSOARG00020012278) #34 KBTBD3 (ENSOARG00020012182) #35 AASDHPPT (ENSOARG00020012064) #36 ANKRD49 (ENSOARG00020012037) MRE11 (ENSOARG00020011913) GPR83 (ENSOARG00020011841) ENSOARG00020011815 OR4C16 (ENSOARG00020011729) Goat MODERN SPECIES 6 YAP1 (ENSCHIG00000017090) #7 ENSCHIG00000023994 ENSCHIG00000018499 BIRC3 (ENSCHIG00000012208) #8 BIRC2 (ENSCHIG00000017347) #9 ENSCHIG00000013361 #10 MMP7 (ENSCHIG00000026468) #11 MMP20 (ENSCHIG00000026359) #12 MMP27 (ENSCHIG00000012641) #13 MMP8 (ENSCHIG00000026968) #15 MMP1 (ENSCHIG00000010427) #17 MMP3 (ENSCHIG00000022679) #18 MMP12 (ENSCHIG00000026649) #19 MMP13 (ENSCHIG00000021039) #20 DCUN1D5 (ENSCHIG00000021271) #21 DYNC2H1 (ENSCHIG00000017543) #22 PDGFD (ENSCHIG00000006770) #23 DDI1 (ENSCHIG00000007991) #24 ENSCHIG00000008146 ENSCHIG00000023433 #27 ENSCHIG00000013458 #30 ENSCHIG00000020857 ENSCHIG00000009053 ENSCHIG00000019889 #33 ENSCHIG00000022465 #33 MSANTD4 (ENSCHIG00000021603) #34 ENSCHIG00000013896 #34 KBTBD3 (ENSCHIG00000012819) #35 AASDHPPT (ENSCHIG00000017726) #36 ANKRD49 (ENSCHIG00000015614) MRE11 (ENSCHIG00000021669) Bovinae ANCESTRAL SPECIES 21 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719.a ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000171276 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j ENSGT00940000158647.g.a.c ENSGT00900000141017.c.b.b Bos ANCESTRAL SPECIES 20 ENSGT01100000263481.n.a.b.a.b.a.b.a.b.a.a.a.b ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b.l #9 ENSGT00910000147719.a ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000163552.a.b.b.a ENSGT00940000171276 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415.f #35 ENSGT00390000004663.k #36 ENSGT00390000004663.l #36 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j Bos_a ANCESTRAL SPECIES 15 ENSGT01100000263481.n.a.b.a.b.a.b.a.b.a.a.a.b ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b.l #9 ENSGT00910000147719.a ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000163552.a.b.b.a ENSGT00940000171276 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415.f #35 ENSGT00390000004663.k #36 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d Domestic yak MODERN SPECIES 4 ENSBGRG00000016649 BIRC3 (ENSBGRG00000016714) #8 ENSBGRG00000016826 #9 ENSBGRG00000017104 ENSBGRG00000017169 #10 MMP7 (ENSBGRG00000017747) #11 MMP20 (ENSBGRG00000017827) #12 MMP27 (ENSBGRG00000017957) #13 MMP8 (ENSBGRG00000018057) #15 ENSBGRG00000018167 #17 MMP1 (ENSBGRG00000018480) #17 MMP3 (ENSBGRG00000018711) #18 MMP12 (ENSBGRG00000018771) #19 MMP13 (ENSBGRG00000018832) #20 DCUN1D5 (ENSBGRG00000018907) #21 DYNC2H1 (ENSBGRG00000019097) #22 ENSBGRG00000020346 PDGFD (ENSBGRG00000020375) #23 DDI1 (ENSBGRG00000020479) #24 ENSBGRG00000020487 ENSBGRG00000020511 ENSBGRG00000020533 #27 ENSBGRG00000020667 #30 GRIA4 (ENSBGRG00000020983) #33 MSANTD4 (ENSBGRG00000021125) #34 KBTBD3 (ENSBGRG00000021150) #35 ENSBGRG00000021208 #36 ANKRD49 (ENSBGRG00000021288) MRE11 (ENSBGRG00000021342) IZUMO1R (ENSBGRG00000021756) ENSBGRG00000021894 Wild yak MODERN SPECIES 115 DCUN1D5 (ENSBMUG00000011697) #21 DYNC2H1 (ENSBMUG00000012095) #22 CDH6 (ENSBMUG00000012474) DROSHA (ENSBMUG00000012602) C5orf22 (ENSBMUG00000012660) ENSBMUG00000012666 ENSBMUG00000012684 PDZD2 (ENSBMUG00000012698) ENSBMUG00000012710 MTMR12 (ENSBMUG00000012798) ENSBMUG00000012835 ENSBMUG00000012841 Bos_b ANCESTRAL SPECIES 19 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b.l.a #9 ENSGT00910000147719.a ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b.kb #17 ENSGT00940000154907.b.lb #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000163552.a.b.b.a ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000174020.a.b ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415.f #35 ENSGT00390000004663.k #36 ENSGT00390000004663.l #36 ENSGT00390000003919 ENSGT00390000017288.b ENSGT00940000154336.d ENSGT00950000183144.A.j Cow DUPLICATION Cow DUPLICATION Cow MODERN SPECIES 6 BIRC3 (ENSBTAG00000024918) #8 BIRC2 (ENSBTAG00000035735) #9 ENSBTAG00000052956 ENSBTAG00000049233 #10 MMP7 (ENSBTAG00000004594) #11 MMP20 (ENSBTAG00000014251) #12 MMP27 (ENSBTAG00000040567) #13 MMP8 (ENSBTAG00000046732) #15 ENSBTAG00000015818 #17 MMP1 (ENSBTAG00000048029) #17 MMP3 (ENSBTAG00000037768) #18 MMP12 (ENSBTAG00000053542) #19 MMP13 (ENSBTAG00000015059) #20 ENSBTAG00000050505 DCUN1D5 (ENSBTAG00000003087) #21 ENSBTAG00000019309 #22 ENSBTAG00000048939 #22 ENSBTAG00000047461 #22 ENSBTAG00000051741 ENSBTAG00000049312 ##37 DDI1 (ENSBTAG00000002887) #24 PDGFD (ENSBTAG00000034827) #23 ENSBTAG00000052675 ENSBTAG00000051613 ENSBTAG00000053811 CASP4 (ENSBTAG00000020884) #27 CASP1 (ENSBTAG00000050239) #30 ENSBTAG00000055258 GRIA4 (ENSBTAG00000006176) #33 MSANTD4 (ENSBTAG00000023989) #34 KBTBD3 (ENSBTAG00000005392) #35 Cow MODERN SPECIES 6 ENSBTAG00000052956 ENSBTAG00000049233 #10 MMP7 (ENSBTAG00000004594) #11 MMP20 (ENSBTAG00000014251) #12 MMP27 (ENSBTAG00000040567) #13 MMP8 (ENSBTAG00000046732) #15 ENSBTAG00000015818 #17 MMP1 (ENSBTAG00000048029) #17 MMP3 (ENSBTAG00000037768) #18 MMP12 (ENSBTAG00000053542) #19 MMP13 (ENSBTAG00000015059) #20 ENSBTAG00000050505 DCUN1D5 (ENSBTAG00000003087) #21 ENSBTAG00000019309 #22 ENSBTAG00000048939 #22 ENSBTAG00000047461 #22 ENSBTAG00000051741 ENSBTAG00000049312 ##37 DDI1 (ENSBTAG00000002887) #24 PDGFD (ENSBTAG00000034827) #23 ENSBTAG00000052675 ENSBTAG00000051613 ENSBTAG00000053811 CASP4 (ENSBTAG00000020884) #27 CASP1 (ENSBTAG00000050239) #30 ENSBTAG00000055258 GRIA4 (ENSBTAG00000006176) #33 MSANTD4 (ENSBTAG00000023989) #34 KBTBD3 (ENSBTAG00000005392) #35 AASDHPPT (ENSBTAG00000012279) #36 ANKRD49 (ENSBTAG00000009176) Cow MODERN SPECIES 6 BIRC2 (ENSBTAG00000035735) #9 ENSBTAG00000052956 ENSBTAG00000049233 #10 MMP7 (ENSBTAG00000004594) #11 MMP20 (ENSBTAG00000014251) #12 MMP27 (ENSBTAG00000040567) #13 MMP8 (ENSBTAG00000046732) #15 ENSBTAG00000015818 #17 MMP1 (ENSBTAG00000048029) #17 MMP3 (ENSBTAG00000037768) #18 MMP12 (ENSBTAG00000053542) #19 MMP13 (ENSBTAG00000015059) #20 ENSBTAG00000050505 DCUN1D5 (ENSBTAG00000003087) #21 ENSBTAG00000019309 #22 ENSBTAG00000048939 #22 ENSBTAG00000047461 #22 ENSBTAG00000051741 ENSBTAG00000049312 ##37 DDI1 (ENSBTAG00000002887) #24 PDGFD (ENSBTAG00000034827) #23 ENSBTAG00000052675 ENSBTAG00000051613 ENSBTAG00000053811 CASP4 (ENSBTAG00000020884) #27 CASP1 (ENSBTAG00000050239) #30 ENSBTAG00000055258 GRIA4 (ENSBTAG00000006176) #33 MSANTD4 (ENSBTAG00000023989) #34 KBTBD3 (ENSBTAG00000005392) #35 AASDHPPT (ENSBTAG00000012279) #36 Hybrid Bos Indicus MODERN SPECIES 6 BIRC3 (ENSBIXG00005002521) #8 ENSBIXG00005015904 #9 ENSBIXG00005015835 ENSBIXG00005015827 #10 MMP7 (ENSBIXG00005015796) #11 MMP20 (ENSBIXG00005015765) #12 MMP27 (ENSBIXG00005007505) #13 MMP8 (ENSBIXG00005015697) #15 ENSBIXG00005015654 #17 ENSBIXG00005002351 #17 MMP3 (ENSBIXG00005015577) #18 MMP12 (ENSBIXG00005015572) #19 MMP13 (ENSBIXG00005015552) #20 ENSBIXG00005007135 DCUN1D5 (ENSBIXG00005015519) #21 DYNC2H1 (ENSBIXG00005006562) #22 PDGFD (ENSBIXG00005015295) #23 DDI1 (ENSBIXG00005015259) #24 ENSBIXG00005005639 ENSBIXG00005015227 #27 ENSBIXG00005015170 #30 ENSBIXG00005002205 ENSBIXG00005015044 GRIA4 (ENSBIXG00005014996) #33 MSANTD4 (ENSBIXG00005014916) #34 KBTBD3 (ENSBIXG00005014892) #35 AASDHPPT (ENSBIXG00005014858) #36 ENSBIXG00005014848 ANKRD49 (ENSBIXG00005014841) MRE11 (ENSBIXG00005014792) ENSBIXG00005014538 American bison MODERN SPECIES 3035 MMP1 (ENSBBBG00000005557) #17 MMP3 (ENSBBBG00000008782) #18 MMP12 (ENSBBBG00000020578) #19 MMP13 (ENSBBBG00000020565) #20 DCUN1D5 (ENSBBBG00000007470) #21 DYNC2H1 (ENSBBBG00000020480) #22 PDGFD (ENSBBBG00000007015) #23 DDI1 (ENSBBBG00000005435) #24 Camelidae DUPLICATION Camelidae ANCESTRAL SPECIES ENSGT00940000154620.lb #22 Arabian camel DUPLICATION Arabian camel MODERN SPECIES 174 ENSCDRG00005011135 #22 Arabian camel MODERN SPECIES 186 ENSCDRG00005007557 #22 Camelidae ANCESTRAL SPECIES 32 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620.mb #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 Arabian camel MODERN SPECIES 1 CFAP300 (ENSCDRG00005001024) YAP1 (ENSCDRG00005001090) #7 BIRC3 (ENSCDRG00005001220) #8 BIRC2 (ENSCDRG00005001258) #9 ENSCDRG00005001278 ENSCDRG00005001282 #10 MMP7 (ENSCDRG00005001294) #11 MMP20 (ENSCDRG00005001309) #12 MMP27 (ENSCDRG00005001340) #13 MMP8 (ENSCDRG00005001367) #15 MMP1 (ENSCDRG00005001400) #17 MMP3 (ENSCDRG00005001425) #18 MMP12 (ENSCDRG00005001447) #19 MMP13 (ENSCDRG00005001466) #20 DCUN1D5 (ENSCDRG00005001503) #21 DYNC2H1 (ENSCDRG00005001586) #22 PDGFD (ENSCDRG00005001697) #23 DDI1 (ENSCDRG00005001731) #24 ENSCDRG00005001740 #27 ENSCDRG00005001784 #30 GRIA4 (ENSCDRG00005001949) #33 MSANTD4 (ENSCDRG00005002065) #34 KBTBD3 (ENSCDRG00005002074) #35 AASDHPPT (ENSCDRG00005002082) #36 ENSCDRG00005002094 Alpaca MODERN SPECIES 659 DCUN1D5 (ENSVPAG00000011347) #21 ENSVPAG00000011348 #22 Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000162428.b ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00390000008536 Laurasiatheria_c ANCESTRAL SPECIES 23 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000162428.b ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 ENSGT00940000159782 Chiroptera ANCESTRAL SPECIES 33 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000162428.b ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000015352.n ENSGT00940000155627 ENSGT00940000158563 ENSGT00390000008536 Microchiroptera ANCESTRAL SPECIES 34 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00910000147719 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000162428.b ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000015352.n ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 Greater horseshoe bat MODERN SPECIES 2 BIRC2 (ENSRFEG00010006459) #9 ENSRFEG00010006526 ENSRFEG00010006546 #10 ENSRFEG00010006590 MMP7 (ENSRFEG00010006603) #11 MMP20 (ENSRFEG00010006633) #12 MMP27 (ENSRFEG00010006694) #13 MMP8 (ENSRFEG00010006863) #15 MMP10 (ENSRFEG00010007505) #16 MMP1 (ENSRFEG00010007604) #17 MMP3 (ENSRFEG00010007645) #18 MMP12 (ENSRFEG00010007757) #19 ENSRFEG00010007869 MMP13 (ENSRFEG00010007911) #20 DCUN1D5 (ENSRFEG00010008035) #21 DYNC2H1 (ENSRFEG00010008170) #22 ENSRFEG00010008309 PDGFD (ENSRFEG00010008344) #23 ENSRFEG00010008414 DDI1 (ENSRFEG00010008434) #24 ENSRFEG00010008449 ENSRFEG00010008486 #25 ENSRFEG00010008552 #27 ENSRFEG00010008674 #30 ENSRFEG00010008776 ENSRFEG00010008796 GRIA4 (ENSRFEG00010008848) #33 MSANTD4 (ENSRFEG00010008997) #34 KBTBD3 (ENSRFEG00010009026) #35 AASDHPPT (ENSRFEG00010009049) #36 ENSRFEG00010009091 Microbat MODERN SPECIES 1054 PIH1D2 (ENSMLUG00000012219) NKAPD1 (ENSMLUG00000024705) TIMM8B (ENSMLUG00000012225) SDHD (ENSMLUG00000012228) ENSMLUG00000027380 TEX12 (ENSMLUG00000017694) BCO2 (ENSMLUG00000017695) PTS (ENSMLUG00000023388) ENSMLUG00000009366 ENSMLUG00000027294 NCAM1 (ENSMLUG00000011838) TTC12 (ENSMLUG00000011854) ANKK1 (ENSMLUG00000011881) DRD2 (ENSMLUG00000011890) ZW10 (ENSMLUG00000014203) DYNC2H1 (ENSMLUG00000003216) #22 PDGFD (ENSMLUG00000011003) #23 DDI1 (ENSMLUG00000014443) #24 Megabat MODERN SPECIES 2900 ENSPVAG00000007495 #22 Equus ANCESTRAL SPECIES 25 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000162555 #25 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 Donkey DUPLICATION Donkey DUPLICATION Donkey MODERN SPECIES 12 CEP126 (ENSEASG00005011151) CFAP300 (ENSEASG00005031746) YAP1 (ENSEASG00005011146) #7 BIRC3 (ENSEASG00005011145) #8 BIRC2 (ENSEASG00005011141) #9 TMEM123 (ENSEASG00005011137) #10 MMP7 (ENSEASG00005011134) #11 MMP20 (ENSEASG00005011128) #12 MMP27 (ENSEASG00005011124) #13 MMP8 (ENSEASG00005011052) #15 MMP1 (ENSEASG00005011048) #17 MMP3 (ENSEASG00005011047) #18 MMP12 (ENSEASG00005011046) #19 MMP13 (ENSEASG00005011044) #20 ENSEASG00005011043 #21 ENSEASG00005011042 #22 ENSEASG00005030689 #22 ENSEASG00005011036 #22 DDI1 (ENSEASG00005011033) #24 PDGFD (ENSEASG00005011032) #23 ENSEASG00005011031 #25 ENSEASG00005011030 #27 ENSEASG00005011029 #30 ENSEASG00005026662 #25 ENSEASG00005011027 GRIA4 (ENSEASG00005011024) #33 MSANTD4 (ENSEASG00005011020) #34 KBTBD3 (ENSEASG00005011019) #35 AASDHPPT (ENSEASG00005011016) #36 GUCY1A2 (ENSEASG00005011012) CWF19L2 (ENSEASG00005011011) Donkey MODERN SPECIES 12 YAP1 (ENSEASG00005011146) #7 BIRC3 (ENSEASG00005011145) #8 BIRC2 (ENSEASG00005011141) #9 TMEM123 (ENSEASG00005011137) #10 MMP7 (ENSEASG00005011134) #11 MMP20 (ENSEASG00005011128) #12 MMP27 (ENSEASG00005011124) #13 MMP8 (ENSEASG00005011052) #15 MMP1 (ENSEASG00005011048) #17 MMP3 (ENSEASG00005011047) #18 MMP12 (ENSEASG00005011046) #19 MMP13 (ENSEASG00005011044) #20 ENSEASG00005011043 #21 ENSEASG00005011042 #22 ENSEASG00005030689 #22 ENSEASG00005011036 #22 DDI1 (ENSEASG00005011033) #24 PDGFD (ENSEASG00005011032) #23 ENSEASG00005011031 #25 ENSEASG00005011030 #27 ENSEASG00005011029 #30 ENSEASG00005026662 #25 ENSEASG00005011027 GRIA4 (ENSEASG00005011024) #33 MSANTD4 (ENSEASG00005011020) #34 KBTBD3 (ENSEASG00005011019) #35 AASDHPPT (ENSEASG00005011016) #36 GUCY1A2 (ENSEASG00005011012) CWF19L2 (ENSEASG00005011011) ALKBH8 (ENSEASG00005011010) ELMOD1 (ENSEASG00005011008) Donkey MODERN SPECIES 12 CFAP300 (ENSEASG00005031746) YAP1 (ENSEASG00005011146) #7 BIRC3 (ENSEASG00005011145) #8 BIRC2 (ENSEASG00005011141) #9 TMEM123 (ENSEASG00005011137) #10 MMP7 (ENSEASG00005011134) #11 MMP20 (ENSEASG00005011128) #12 MMP27 (ENSEASG00005011124) #13 MMP8 (ENSEASG00005011052) #15 MMP1 (ENSEASG00005011048) #17 MMP3 (ENSEASG00005011047) #18 MMP12 (ENSEASG00005011046) #19 MMP13 (ENSEASG00005011044) #20 ENSEASG00005011043 #21 ENSEASG00005011042 #22 ENSEASG00005030689 #22 ENSEASG00005011036 #22 DDI1 (ENSEASG00005011033) #24 PDGFD (ENSEASG00005011032) #23 ENSEASG00005011031 #25 ENSEASG00005011030 #27 ENSEASG00005011029 #30 ENSEASG00005026662 #25 ENSEASG00005011027 GRIA4 (ENSEASG00005011024) #33 MSANTD4 (ENSEASG00005011020) #34 KBTBD3 (ENSEASG00005011019) #35 AASDHPPT (ENSEASG00005011016) #36 GUCY1A2 (ENSEASG00005011012) CWF19L2 (ENSEASG00005011011) ALKBH8 (ENSEASG00005011010) Horse MODERN SPECIES 28 YAP1 (ENSECAG00000008660) #7 ENSECAG00000054274 BIRC3 (ENSECAG00000047232) #8 BIRC3 (ENSECAG00000012229) #9 TMEM123 (ENSECAG00000033952) #10 MMP7 (ENSECAG00000021262) #11 MMP20 (ENSECAG00000011739) #12 MMP27 (ENSECAG00000019404) #13 MMP8 (ENSECAG00000044786) #15 MMP1 (ENSECAG00000046821) #17 MMP12 (ENSECAG00000019445) #18 MMP12 (ENSECAG00000056462) #19 MMP13 (ENSECAG00000005506) #20 ENSECAG00000038696 DCUN1D5 (ENSECAG00000005717) #21 DYNC2H1 (ENSECAG00000016257) #22 PDGFD (ENSECAG00000024746) #23 DDI1 (ENSECAG00000005520) #24 ENSECAG00000008723 #25 ENSECAG00000012876 #27 CASP1 (ENSECAG00000024367) #30 ENSECAG00000027719 #25 GRIA4 (ENSECAG00000009916) #33 MSANTD4 (ENSECAG00000011320) #34 KBTBD3 (ENSECAG00000012801) #35 AASDHPPT (ENSECAG00000013032) #36 GUCY1A2 (ENSECAG00000018191) CWF19L2 (ENSECAG00000004314) ALKBH8 (ENSECAG00000019425) ELMOD1 (ENSECAG00000010926) SLC35F2 (ENSECAG00000019266) Carnivora ANCESTRAL SPECIES 21 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01090000260451 ENSGT00390000015655.a Felidae ANCESTRAL SPECIES ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000015352.o.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01090000260451 ENSGT00390000015655.a Panthera ANCESTRAL SPECIES 26 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000015352.o.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01090000260451 ENSGT00390000015655.a Panthera_a ANCESTRAL SPECIES 29 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000015352.o.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01090000260451 ENSGT00390000015655.a lion MODERN SPECIES 10 CEP126 (ENSPLOG00000017379) YAP1 (ENSPLOG00000017584) #7 BIRC3 (ENSPLOG00000018022) #8 BIRC2 (ENSPLOG00000018052) #9 TMEM123 (ENSPLOG00000018213) #10 MMP7 (ENSPLOG00000018223) #11 MMP20 (ENSPLOG00000018280) #12 MMP27 (ENSPLOG00000018359) #13 MMP8 (ENSPLOG00000018450) #15 ENSPLOG00000018488 #17 MMP1 (ENSPLOG00000018733) #17 MMP3 (ENSPLOG00000018808) #18 MMP12 (ENSPLOG00000018889) #19 MMP13 (ENSPLOG00000018961) #20 ENSPLOG00000019032 #21 DYNC2H1 (ENSPLOG00000019300) #22 PDGFD (ENSPLOG00000020532) #23 DDI1 (ENSPLOG00000020565) #24 ENSPLOG00000020643 #25 ENSPLOG00000020689 #27 GRIA4 (ENSPLOG00000020766) #33 MSANTD4 (ENSPLOG00000021006) #34 KBTBD3 (ENSPLOG00000021027) #35 AASDHPPT (ENSPLOG00000021049) #36 GUCY1A2 (ENSPLOG00000021082) ENSPLOG00000021113 CWF19L2 (ENSPLOG00000021204) ALKBH8 (ENSPLOG00000021289) ELMOD1 (ENSPLOG00000021429) ENSPLOG00000021511 SLC35F2 (ENSPLOG00000021519) leopard MODERN SPECIES 155 YAP1 (ENSPPRG00000017793) #7 BIRC3 (ENSPPRG00000017639) #8 BIRC2 (ENSPPRG00000015656) #9 ENSPPRG00000015061 #10 MMP7 (ENSPPRG00000014613) #11 MMP20 (ENSPPRG00000014290) #12 MMP27 (ENSPPRG00000013916) #13 MMP8 (ENSPPRG00000013466) #15 ENSPPRG00000013409 #17 ENSPPRG00000012489 #18 MMP1 (ENSPPRG00000012447) #17 ENSPPRG00000012357 #18 MMP12 (ENSPPRG00000012183) #19 MMP13 (ENSPPRG00000012080) #20 DCUN1D5 (ENSPPRG00000011374) #21 DYNC2H1 (ENSPPRG00000008878) #22 PDGFD (ENSPPRG00000005408) #23 Tiger MODERN SPECIES 74 CFAP300 (ENSPTIG00000009894) YAP1 (ENSPTIG00000009822) #7 BIRC3 (ENSPTIG00000009589) #8 BIRC2 (ENSPTIG00000009197) #9 ENSPTIG00000008991 #10 MMP7 (ENSPTIG00000008931) #11 MMP20 (ENSPTIG00000008810) #12 MMP27 (ENSPTIG00000008671) #13 MMP8 (ENSPTIG00000008615) #15 MMP10 (ENSPTIG00000008445) #16 MMP1 (ENSPTIG00000008353) #17 MMP3 (ENSPTIG00000008284) #18 MMP12 (ENSPTIG00000008238) #19 MMP13 (ENSPTIG00000008043) #20 DCUN1D5 (ENSPTIG00000007744) #21 DYNC2H1 (ENSPTIG00000005732) #22 PDGFD (ENSPTIG00000005484) #23 ENSPTIG00000005234 #25 ENSPTIG00000003345 #27 GRIA4 (ENSPTIG00000000010) #33 MSANTD4 (ENSPTIG00000020029) #34 KBTBD3 (ENSPTIG00000019990) #35 AASDHPPT (ENSPTIG00000019943) #36 Cat MODERN SPECIES 241 YAP1 (ENSFCAG00000035050) #7 BIRC3 (ENSFCAG00000041774) #8 TMEM123 (ENSFCAG00000041930) #10 MMP7 (ENSFCAG00000015787) #11 MMP20 (ENSFCAG00000015788) #12 MMP27 (ENSFCAG00000015789) #13 MMP8 (ENSFCAG00000015790) #15 ENSFCAG00000047451 #17 MMP10 (ENSFCAG00000015796) #16 MMP1 (ENSFCAG00000015791) #17 MMP3 (ENSFCAG00000015792) #18 MMP12 (ENSFCAG00000010982) #19 MMP13 (ENSFCAG00000000118) #20 ENSFCAG00000049048 DCUN1D5 (ENSFCAG00000037795) #21 DYNC2H1 (ENSFCAG00000028573) #22 PDGFD (ENSFCAG00000024385) #23 DDI1 (ENSFCAG00000043639) #24 CASP12 (ENSFCAG00000005920) #25 CASP4 (ENSFCAG00000005921) #27 ENSFCAG00000037829 GRIA4 (ENSFCAG00000015605) #33 MSANTD4 (ENSFCAG00000042108) #34 KBTBD3 (ENSFCAG00000015606) #35 AASDHPPT (ENSFCAG00000031934) #36 ENSFCAG00000033787 ENSFCAG00000042411 GUCY1A2 (ENSFCAG00000038721) ENSFCAG00000034545 CWF19L2 (ENSFCAG00000045471) ALKBH8 (ENSFCAG00000033583) Caniformia ANCESTRAL SPECIES 17 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000264760 ENSGT00390000015655.a Caniformia_b ANCESTRAL SPECIES 3 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000159759.e.a #18 ENSGT00940000154907.b #17 ENSGT00940000159759.e.b #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000264760 ENSGT00390000015655.a Ursidae ANCESTRAL SPECIES 15 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759.e.a #18 ENSGT00940000159759.e.b #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000264760 ENSGT00390000015655.a ENSGT00940000159933 Ursus ANCESTRAL SPECIES 340 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 Polar bear DUPLICATION Polar bear DUPLICATION Polar bear MODERN SPECIES 166 BIRC2 (ENSUMAG00000009270) #9 ENSUMAG00000009266 #10 MMP7 (ENSUMAG00000009262) #11 MMP20 (ENSUMAG00000009249) #12 MMP27 (ENSUMAG00000009207) #13 MMP8 (ENSUMAG00000009197) #15 ENSUMAG00000009165 #17 ENSUMAG00000009160 #18 MMP1 (ENSUMAG00000009155) #17 ENSUMAG00000009143 #18 MMP12 (ENSUMAG00000009133) #19 MMP13 (ENSUMAG00000009113) #20 DCUN1D5 (ENSUMAG00000009107) #21 ENSUMAG00000009090 #22 ENSUMAG00000009073 #22 ENSUMAG00000009046 #22 DDI1 (ENSUMAG00000009040) #24 PDGFD (ENSUMAG00000009038) #23 ENSUMAG00000009027 #25 ENSUMAG00000009022 #27 GRIA4 (ENSUMAG00000008904) #33 MSANTD4 (ENSUMAG00000008883) #34 KBTBD3 (ENSUMAG00000008879) #35 AASDHPPT (ENSUMAG00000008871) #36 ENSUMAG00000008866 GUCY1A2 (ENSUMAG00000008864) CWF19L2 (ENSUMAG00000008758) ALKBH8 (ENSUMAG00000008743) ELMOD1 (ENSUMAG00000008718) SLC35F2 (ENSUMAG00000008709) ENSUMAG00000008701 Polar bear MODERN SPECIES 166 BIRC3 (ENSUMAG00000009275) #8 BIRC2 (ENSUMAG00000009270) #9 ENSUMAG00000009266 #10 MMP7 (ENSUMAG00000009262) #11 MMP20 (ENSUMAG00000009249) #12 MMP27 (ENSUMAG00000009207) #13 MMP8 (ENSUMAG00000009197) #15 ENSUMAG00000009165 #17 ENSUMAG00000009160 #18 MMP1 (ENSUMAG00000009155) #17 ENSUMAG00000009143 #18 MMP12 (ENSUMAG00000009133) #19 MMP13 (ENSUMAG00000009113) #20 DCUN1D5 (ENSUMAG00000009107) #21 ENSUMAG00000009090 #22 ENSUMAG00000009073 #22 ENSUMAG00000009046 #22 DDI1 (ENSUMAG00000009040) #24 PDGFD (ENSUMAG00000009038) #23 ENSUMAG00000009027 #25 ENSUMAG00000009022 #27 GRIA4 (ENSUMAG00000008904) #33 MSANTD4 (ENSUMAG00000008883) #34 KBTBD3 (ENSUMAG00000008879) #35 AASDHPPT (ENSUMAG00000008871) #36 ENSUMAG00000008866 GUCY1A2 (ENSUMAG00000008864) CWF19L2 (ENSUMAG00000008758) ALKBH8 (ENSUMAG00000008743) ELMOD1 (ENSUMAG00000008718) SLC35F2 (ENSUMAG00000008709) Polar bear MODERN SPECIES 166 YAP1 (ENSUMAG00000009288) #7 BIRC3 (ENSUMAG00000009275) #8 BIRC2 (ENSUMAG00000009270) #9 ENSUMAG00000009266 #10 MMP7 (ENSUMAG00000009262) #11 MMP20 (ENSUMAG00000009249) #12 MMP27 (ENSUMAG00000009207) #13 MMP8 (ENSUMAG00000009197) #15 ENSUMAG00000009165 #17 ENSUMAG00000009160 #18 MMP1 (ENSUMAG00000009155) #17 ENSUMAG00000009143 #18 MMP12 (ENSUMAG00000009133) #19 MMP13 (ENSUMAG00000009113) #20 DCUN1D5 (ENSUMAG00000009107) #21 ENSUMAG00000009090 #22 ENSUMAG00000009073 #22 ENSUMAG00000009046 #22 DDI1 (ENSUMAG00000009040) #24 PDGFD (ENSUMAG00000009038) #23 ENSUMAG00000009027 #25 ENSUMAG00000009022 #27 GRIA4 (ENSUMAG00000008904) #33 MSANTD4 (ENSUMAG00000008883) #34 KBTBD3 (ENSUMAG00000008879) #35 AASDHPPT (ENSUMAG00000008871) #36 ENSUMAG00000008866 GUCY1A2 (ENSUMAG00000008864) CWF19L2 (ENSUMAG00000008758) ALKBH8 (ENSUMAG00000008743) ELMOD1 (ENSUMAG00000008718) American black bear DUPLICATION American black bear MODERN SPECIES 57 ENSUAMG00000013278 #22 ENSUAMG00000013276 #22 PDGFD (ENSUAMG00000013271) #23 DDI1 (ENSUAMG00000013270) #24 American black bear MODERN SPECIES 57 ENSUAMG00000013278 #22 ENSUAMG00000013276 #22 PDGFD (ENSUAMG00000013271) #23 DDI1 (ENSUAMG00000013270) #24 Giant Panda MODERN SPECIES 18 CFAP300 (ENSAMEG00000009990) YAP1 (ENSAMEG00000010001) #7 BIRC2 (ENSAMEG00000010031) #9 TMEM123 (ENSAMEG00000010067) #10 MMP7 (ENSAMEG00000010068) #11 MMP20 (ENSAMEG00000010079) #12 MMP27 (ENSAMEG00000010096) #13 MMP8 (ENSAMEG00000010107) #15 ENSAMEG00000028774 #17 ENSAMEG00000010164 #18 MMP1 (ENSAMEG00000010172) #17 ENSAMEG00000010203 #18 MMP12 (ENSAMEG00000010243) #19 MMP13 (ENSAMEG00000010270) #20 DCUN1D5 (ENSAMEG00000010318) #21 DYNC2H1 (ENSAMEG00000010320) #22 PDGFD (ENSAMEG00000013560) #23 DDI1 (ENSAMEG00000019134) #24 ENSAMEG00000000511 #25 ENSAMEG00000000467 #27 ENSAMEG00000000390 #33 ENSAMEG00000000384 #34 KBTBD3 (ENSAMEG00000000382) #35 AASDHPPT (ENSAMEG00000000370) #36 GUCY1A2 (ENSAMEG00000014522) ENSAMEG00000019460 CWF19L2 (ENSAMEG00000015500) ALKBH8 (ENSAMEG00000002177) ELMOD1 (ENSAMEG00000002195) ENSAMEG00000019353 SLC35F2 (ENSAMEG00000002230) Mustelinae ANCESTRAL SPECIES 111 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000159759.e.a #18 ENSGT00940000154907.b #17 ENSGT00940000159759.e.b #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000264760 ENSGT00390000015655.a American mink MODERN SPECIES 178 ENSNVIG00000021606 BIRC3 (ENSNVIG00000021612) #8 BIRC2 (ENSNVIG00000021650) #9 ENSNVIG00000021676 #10 ENSNVIG00000021687 MMP20 (ENSNVIG00000021713) #12 MMP27 (ENSNVIG00000021721) #13 MMP8 (ENSNVIG00000021739) #15 ENSNVIG00000021764 #17 ENSNVIG00000021891 #18 MMP1 (ENSNVIG00000021897) #17 ENSNVIG00000021908 #18 MMP12 (ENSNVIG00000021917) #19 MMP13 (ENSNVIG00000021947) #20 DCNL5 (ENSNVIG00000021961) #21 DYNC2H1 (ENSNVIG00000022015) #22 PDGFD (ENSNVIG00000022429) #23 DDI1 (ENSNVIG00000022449) #24 CASP12 (ENSNVIG00000022452) #25 ENSNVIG00000022460 #27 ENSNVIG00000022469 #30 GRIA4 (ENSNVIG00000022497) #33 MSANTD4 (ENSNVIG00000022573) #34 KBTBD3 (ENSNVIG00000022585) #35 AASDHPPT (ENSNVIG00000022596) #36 Ferret MODERN SPECIES 268 YAP1 (ENSMPUG00000007208) #7 BIRC3 (ENSMPUG00000007197) #8 BIRC2 (ENSMPUG00000007189) #9 ENSMPUG00000007177 #10 MMP7 (ENSMPUG00000007166) #11 MMP20 (ENSMPUG00000007153) #12 MMP27 (ENSMPUG00000007119) #13 MMP8 (ENSMPUG00000006884) #15 ENSMPUG00000006878 #18 MMP1 (ENSMPUG00000006871) #17 ENSMPUG00000006864 #18 MMP12 (ENSMPUG00000006848) #19 MMP13 (ENSMPUG00000006840) #20 ENSMPUG00000006838 DCUN1D5 (ENSMPUG00000006833) #21 DYNC2H1 (ENSMPUG00000006434) #22 ENSMPUG00000006430 DDI1 (ENSMPUG00000006425) #24 PDGFD (ENSMPUG00000006416) #23 ENSMPUG00000006357 #25 ENSMPUG00000006341 GRIA4 (ENSMPUG00000006324) #33 MSANTD4 (ENSMPUG00000006316) #34 KBTBD3 (ENSMPUG00000006307) #35 AASDHPPT (ENSMPUG00000006273) #36 ENSMPUG00000006266 GUCY1A2 (ENSMPUG00000006254) CWF19L2 (ENSMPUG00000006145) ALKBH8 (ENSMPUG00000006077) ELMOD1 (ENSMPUG00000006069) ENSMPUG00000020160 Canidae ANCESTRAL SPECIES 27 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000155677.b #33 ENSGT00950000186014 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00390000017443.g.a.a ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000163894 ENSGT00940000159782 Red fox MODERN SPECIES 61 CFAP300 (ENSVVUG00000010540) YAP1 (ENSVVUG00000010559) #7 BIRC3 (ENSVVUG00000010573) #8 BIRC2 (ENSVVUG00000010579) #9 ENSVVUG00000010721 #10 ENSVVUG00000010725 MMP7 (ENSVVUG00000010731) #11 MMP20 (ENSVVUG00000010743) #12 MMP27 (ENSVVUG00000010759) #13 MMP8 (ENSVVUG00000010844) #15 MMP1 (ENSVVUG00000011949) #17 MMP3 (ENSVVUG00000011962) #18 MMP12 (ENSVVUG00000011970) #19 MMP13 (ENSVVUG00000011996) #20 ENSVVUG00000012007 #21 DYNC2H1 (ENSVVUG00000012126) #22 PDGFD (ENSVVUG00000013885) #23 DDI1 (ENSVVUG00000013892) #24 ENSVVUG00000013893 ENSVVUG00000013912 CASP12 (ENSVVUG00000013915) #25 ENSVVUG00000013918 ENSVVUG00000013932 GRIA4 (ENSVVUG00000013946) #33 ENSVVUG00000013955 MSANTD4 (ENSVVUG00000013957) #34 KBTBD3 (ENSVVUG00000013959) #35 AASDHPPT (ENSVVUG00000013961) #36 ENSVVUG00000013968 ENSVVUG00000013969 GUCY1A2 (ENSVVUG00000013971) Canis_lupus ANCESTRAL SPECIES 28 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155.a #21 ENSGT00940000154620 #22 ENSGT00950000182999.a.b #24 ENSGT00940000159575 #23 ENSGT00950000182967.a.a.a.a.a.b.b.a ENSGT00940000162555 #25 ENSGT00940000162428.b ENSGT00940000155677.b #33 ENSGT00950000186014 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00390000017443.g.a.a ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000163894 Dingo DUPLICATION Dingo DUPLICATION Dingo MODERN SPECIES 214 YAP1 (ENSCAFG00020009787) #7 BIRC3 (ENSCAFG00020009777) #8 BIRC2 (ENSCAFG00020009773) #9 ENSCAFG00020009766 #11 MMP20 (ENSCAFG00020009756) #12 MMP27 (ENSCAFG00020009747) #13 MMP8 (ENSCAFG00020009478) #15 MMP1 (ENSCAFG00020009380) #17 MMP3 (ENSCAFG00020009376) #18 MMP12 (ENSCAFG00020009354) #19 MMP13 (ENSCAFG00020009304) #20 ENSCAFG00020009289 #21 VDAC1 (ENSCAFG00020009285) ENSCAFG00020009260 #22 ENSCAFG00020009235 #22 ENSCAFG00020009224 #22 DDI1 (ENSCAFG00020009203) #24 PDGFD (ENSCAFG00020009202) #23 ENSCAFG00020009183 ENSCAFG00020009172 CASP12 (ENSCAFG00020009167) #25 ENSCAFG00020009158 ENSCAFG00020009148 GRIA4 (ENSCAFG00020009023) #33 MSANTD4 (ENSCAFG00020009005) #34 KBTBD3 (ENSCAFG00020008995) #35 AASDHPPT (ENSCAFG00020008990) #36 ENSCAFG00020008979 GUCY1A2 (ENSCAFG00020008933) CWF19L2 (ENSCAFG00020008885) ALKBH8 (ENSCAFG00020008876) Dingo MODERN SPECIES 214 CEP126 (ENSCAFG00020009832) CFAP300 (ENSCAFG00020009803) YAP1 (ENSCAFG00020009787) #7 BIRC3 (ENSCAFG00020009777) #8 BIRC2 (ENSCAFG00020009773) #9 ENSCAFG00020009766 #11 MMP20 (ENSCAFG00020009756) #12 MMP27 (ENSCAFG00020009747) #13 MMP8 (ENSCAFG00020009478) #15 MMP1 (ENSCAFG00020009380) #17 MMP3 (ENSCAFG00020009376) #18 MMP12 (ENSCAFG00020009354) #19 MMP13 (ENSCAFG00020009304) #20 ENSCAFG00020009289 #21 VDAC1 (ENSCAFG00020009285) ENSCAFG00020009260 #22 ENSCAFG00020009235 #22 ENSCAFG00020009224 #22 DDI1 (ENSCAFG00020009203) #24 PDGFD (ENSCAFG00020009202) #23 ENSCAFG00020009183 ENSCAFG00020009172 CASP12 (ENSCAFG00020009167) #25 ENSCAFG00020009158 ENSCAFG00020009148 GRIA4 (ENSCAFG00020009023) #33 MSANTD4 (ENSCAFG00020009005) #34 KBTBD3 (ENSCAFG00020008995) #35 AASDHPPT (ENSCAFG00020008990) #36 ENSCAFG00020008979 GUCY1A2 (ENSCAFG00020008933) Dingo MODERN SPECIES 214 CFAP300 (ENSCAFG00020009803) YAP1 (ENSCAFG00020009787) #7 BIRC3 (ENSCAFG00020009777) #8 BIRC2 (ENSCAFG00020009773) #9 ENSCAFG00020009766 #11 MMP20 (ENSCAFG00020009756) #12 MMP27 (ENSCAFG00020009747) #13 MMP8 (ENSCAFG00020009478) #15 MMP1 (ENSCAFG00020009380) #17 MMP3 (ENSCAFG00020009376) #18 MMP12 (ENSCAFG00020009354) #19 MMP13 (ENSCAFG00020009304) #20 ENSCAFG00020009289 #21 VDAC1 (ENSCAFG00020009285) ENSCAFG00020009260 #22 ENSCAFG00020009235 #22 ENSCAFG00020009224 #22 DDI1 (ENSCAFG00020009203) #24 PDGFD (ENSCAFG00020009202) #23 ENSCAFG00020009183 ENSCAFG00020009172 CASP12 (ENSCAFG00020009167) #25 ENSCAFG00020009158 ENSCAFG00020009148 GRIA4 (ENSCAFG00020009023) #33 MSANTD4 (ENSCAFG00020009005) #34 KBTBD3 (ENSCAFG00020008995) #35 AASDHPPT (ENSCAFG00020008990) #36 ENSCAFG00020008979 GUCY1A2 (ENSCAFG00020008933) CWF19L2 (ENSCAFG00020008885) Dog DUPLICATION Dog MODERN SPECIES 33 YAP1 (ENSCAFG00845001157) #7 BIRC3 (ENSCAFG00845001106) #8 BIRC2 (ENSCAFG00845001046) #9 TMEM123 (ENSCAFG00845001013) #10 MMP7 (ENSCAFG00845000992) #11 MMP20 (ENSCAFG00845000974) #12 MMP27 (ENSCAFG00845000933) #13 MMP8 (ENSCAFG00845000899) #15 MMP1 (ENSCAFG00845000871) #17 MMP3 (ENSCAFG00845000842) #18 MMP12 (ENSCAFG00845000798) #19 MMP13 (ENSCAFG00845000761) #20 DCUN1D5 (ENSCAFG00845000732) #21 ENSCAFG00845000714 ENSCAFG00845000695 #22 ENSCAFG00845000669 #22 DDI1 (ENSCAFG00845000650) #24 PDGFD (ENSCAFG00845000627) #23 ENSCAFG00845000601 ENSCAFG00845000587 CASP12 (ENSCAFG00845000482) #25 CASP4 (ENSCAFG00845000375) ENSCAFG00845000322 GRIA4 (ENSCAFG00845000279) #33 MSANTD4 (ENSCAFG00845000215) #34 KBTBD3 (ENSCAFG00845004053) #35 AASDHPPT (ENSCAFG00845004003) #36 ENSCAFG00845003965 GUCY1A2 (ENSCAFG00845003912) CWF19L2 (ENSCAFG00845003823) ALKBH8 (ENSCAFG00845003777) Dog MODERN SPECIES 33 CFAP300 (ENSCAFG00845001215) YAP1 (ENSCAFG00845001157) #7 BIRC3 (ENSCAFG00845001106) #8 BIRC2 (ENSCAFG00845001046) #9 TMEM123 (ENSCAFG00845001013) #10 MMP7 (ENSCAFG00845000992) #11 MMP20 (ENSCAFG00845000974) #12 MMP27 (ENSCAFG00845000933) #13 MMP8 (ENSCAFG00845000899) #15 MMP1 (ENSCAFG00845000871) #17 MMP3 (ENSCAFG00845000842) #18 MMP12 (ENSCAFG00845000798) #19 MMP13 (ENSCAFG00845000761) #20 DCUN1D5 (ENSCAFG00845000732) #21 ENSCAFG00845000714 ENSCAFG00845000695 #22 ENSCAFG00845000669 #22 DDI1 (ENSCAFG00845000650) #24 PDGFD (ENSCAFG00845000627) #23 ENSCAFG00845000601 ENSCAFG00845000587 CASP12 (ENSCAFG00845000482) #25 CASP4 (ENSCAFG00845000375) ENSCAFG00845000322 GRIA4 (ENSCAFG00845000279) #33 MSANTD4 (ENSCAFG00845000215) #34 KBTBD3 (ENSCAFG00845004053) #35 AASDHPPT (ENSCAFG00845004003) #36 ENSCAFG00845003965 GUCY1A2 (ENSCAFG00845003912) CWF19L2 (ENSCAFG00845003823) Atlantogenata ANCESTRAL SPECIES 40 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a Xenarthra ANCESTRAL SPECIES 226 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 Sloth MODERN SPECIES 6953 ENSCHOG00000013607 #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 2666 MMP10 (ENSDNOG00000019850) #16 MMP1 (ENSDNOG00000046998) #17 MMP3 (ENSDNOG00000001886) #18 ENSDNOG00000049442 MMP12 (ENSDNOG00000016544) #19 MMP13 (ENSDNOG00000009362) #20 DCUN1D5 (ENSDNOG00000035460) #21 ENSDNOG00000035114 #22 Armadillo MODERN SPECIES 1006 ENSDNOG00000043081 ENSDNOG00000039026 ENSDNOG00000047695 #22 PDGFD (ENSDNOG00000035513) #23 DDI1 (ENSDNOG00000003578) #24 CASP12 (ENSDNOG00000001797) #25 ENSDNOG00000012369 #27 ENSDNOG00000010333 #30 GRIA4 (ENSDNOG00000035874) #33 MSANTD4 (ENSDNOG00000045060) #34 KBTBD3 (ENSDNOG00000036411) #35 AASDHPPT (ENSDNOG00000039175) #36 Afrotheria ANCESTRAL SPECIES 43 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 ENSGT00390000015655.a Tenrec MODERN SPECIES 7765 ENSETEG00000018615 #22 Afrotheria_a ANCESTRAL SPECIES 41 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.i.a #8 ENSGT00940000154175.i.b #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000163375 #16 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000162085 #19 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00950000182999.a.b #24 ENSGT00940000162555 #25 ENSGT00940000161497 #27 ENSGT00940000159114 #30 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000240879 ENSGT00390000015655.a Elephant MODERN SPECIES 340 CFAP300 (ENSLAFG00000003215) YAP1 (ENSLAFG00000003216) #7 BIRC3 (ENSLAFG00000006047) #8 BIRC2 (ENSLAFG00000002953) #9 ENSLAFG00000002954 #10 MMP7 (ENSLAFG00000002955) #11 MMP20 (ENSLAFG00000010998) #12 MMP27 (ENSLAFG00000013164) #13 MMP8 (ENSLAFG00000013170) #15 MMP10 (ENSLAFG00000023165) #16 MMP1 (ENSLAFG00000001642) #17 MMP3 (ENSLAFG00000010058) #18 MMP12 (ENSLAFG00000010062) #19 MMP13 (ENSLAFG00000006001) #20 DCUN1D5 (ENSLAFG00000016481) #21 DYNC2H1 (ENSLAFG00000016899) #22 PDGFD (ENSLAFG00000004236) #23 DDI1 (ENSLAFG00000004238) #24 CASP12 (ENSLAFG00000023231) #25 ENSLAFG00000022421 #27 ENSLAFG00000016444 #30 GRIA4 (ENSLAFG00000010979) #33 MSANTD4 (ENSLAFG00000010986) #34 KBTBD3 (ENSLAFG00000013885) #35 AASDHPPT (ENSLAFG00000018543) #36 GUCY1A2 (ENSLAFG00000003075) CWF19L2 (ENSLAFG00000004402) ALKBH8 (ENSLAFG00000017895) ELMOD1 (ENSLAFG00000002246) ENSLAFG00000002248 SLC35F2 (ENSLAFG00000009091) Hyrax MODERN SPECIES 6533 ENSPCAG00000004356 #22 Marsupialia ANCESTRAL SPECIES 5 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.h #9 ENSGT00940000154175.g #9 ENSGT00530000063929.b #10 ENSGT00940000156340.b ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000166491 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000162555.a.a #25 ENSGT00940000162428.a.b ENSGT00940000162428.a.a ENSGT00940000162555.b.b #25 ENSGT01030000234886 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT00390000015655.a Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.h #9 ENSGT00940000154175.g #9 ENSGT00530000063929.b #10 ENSGT00940000156340.b ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000166491 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000162555.a.a #25 ENSGT00940000162428.a.b ENSGT00940000162555.a.b #25 ENSGT00940000162428.a.a ENSGT00940000162555.b.b #25 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT00390000015655.a Diprotodontia ANCESTRAL SPECIES 71 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.h #9 ENSGT00940000154175.g #9 ENSGT00530000063929.b #10 ENSGT00940000156340.b ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000166491 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000162555.a.a #25 ENSGT00940000162428.a.b ENSGT00940000162555.a.b #25 ENSGT00940000162428.a.a ENSGT00940000162555.b.b #25 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT00390000015655.a Diprotodontia_a ANCESTRAL SPECIES 68 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175.h #9 ENSGT00940000154175.g #9 ENSGT00530000063929.b #10 ENSGT00940000156340.b ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000161871 #15 ENSGT00940000154907.b #17 ENSGT00940000159759 #18 ENSGT00940000166491 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000162555.a.a #25 ENSGT00940000162428.a.b ENSGT00940000162555.a.b #25 ENSGT00940000162428.a.a ENSGT00940000162555.b.b #25 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT00390000015655.a koala MODERN SPECIES 62 ENSPCIG00000024466 YAP1 (ENSPCIG00000000622) #7 ENSPCIG00000000593 #9 ENSPCIG00000000555 #9 ENSPCIG00000000538 #10 ENSPCIG00000000519 ENSPCIG00000000404 MMP20 (ENSPCIG00000000326) #12 MMP27 (ENSPCIG00000000304) #13 MMP8 (ENSPCIG00000000259) #15 MMP1 (ENSPCIG00000000229) #17 MMP3 (ENSPCIG00000000208) #18 ENSPCIG00000000181 MMP13 (ENSPCIG00000031091) #20 DCUN1D5 (ENSPCIG00000028494) #21 DYNC2H1 (ENSPCIG00000024886) #22 PDGFD (ENSPCIG00000030112) #23 ENSPCIG00000014109 ENSPCIG00000033610 #25 ENSPCIG00000019980 #25 ENSPCIG00000019977 #25 GRIA4 (ENSPCIG00000024382) #33 MSANTD4 (ENSPCIG00000024381) #34 KBTBD3 (ENSPCIG00000024380) #35 AASDHPPT (ENSPCIG00000036047) #36 GUCY1A2 (ENSPCIG00000002542) ENSPCIG00000002556 ENSPCIG00000002569 ELMOD1 (ENSPCIG00000002612) ENSPCIG00000031787 ENSPCIG00000002651 Common wonbat MODERN SPECIES 486 CFAP300 (ENSVURG00010013089) YAP1 (ENSVURG00010013100) #7 ENSVURG00010013133 #9 ENSVURG00010013150 #10 ENSVURG00010013157 ENSVURG00010013167 MMP20 (ENSVURG00010013183) #12 ENSVURG00010013210 MMP27 (ENSVURG00010013217) #13 MMP8 (ENSVURG00010013224) #15 MMP1 (ENSVURG00010013247) #17 MMP3 (ENSVURG00010013258) #18 ENSVURG00010013278 MMP13 (ENSVURG00010013285) #20 DCUN1D5 (ENSVURG00010013299) #21 DYNC2H1 (ENSVURG00010013327) #22 PDGFD (ENSVURG00010013466) #23 ENSVURG00010013816 ENSVURG00010013820 ENSVURG00010013823 ENSVURG00010013829 #25 ENSVURG00010013832 ENSVURG00010013838 #25 ENSVURG00010013843 ENSVURG00010013851 #25 ENSVURG00010013859 ENSVURG00010013860 ENSVURG00010013863 GRIA4 (ENSVURG00010013871) #33 MSANTD4 (ENSVURG00010013897) #34 KBTBD3 (ENSVURG00010013900) #35 Wallaby MODERN SPECIES 9353 ENSMEUG00000005554 #22 Tasmanian devil MODERN SPECIES 2 ANGPTL5 (ENSSHAG00000008135) ENSSHAG00000008521 CFAP300 (ENSSHAG00000021373) YAP1 (ENSSHAG00000031498) #7 ENSSHAG00000022169 #9 ENSSHAG00000031693 #10 ENSSHAG00000012748 MMP20 (ENSSHAG00000013213) #12 MMP27 (ENSSHAG00000013837) #13 MMP8 (ENSSHAG00000013911) #15 MMP1 (ENSSHAG00000014131) #17 MMP3 (ENSSHAG00000014413) #18 ENSSHAG00000014540 MMP13 (ENSSHAG00000014854) #20 DCUN1D5 (ENSSHAG00000029020) #21 DYNC2H1 (ENSSHAG00000015321) #22 ENSSHAG00000027313 PDGFD (ENSSHAG00000029164) #23 ENSSHAG00000029767 ENSSHAG00000006626 #25 ENSSHAG00000007243 ENSSHAG00000007740 #25 ENSSHAG00000008224 ENSSHAG00000030890 #25 ENSSHAG00000002417 #25 ENSSHAG00000024823 GRIA4 (ENSSHAG00000013857) #33 MSANTD4 (ENSSHAG00000023893) #34 KBTBD3 (ENSSHAG00000023656) #35 AASDHPPT (ENSSHAG00000025896) #36 GUCY1A2 (ENSSHAG00000022853) Opossum MODERN SPECIES 3 CFAP300 (ENSMODG00000000567) YAP1 (ENSMODG00000039367) #7 ENSMODG00000000587 ENSMODG00000000589 #9 ENSMODG00000000608 #9 ENSMODG00000000611 #10 ENSMODG00000000623 MMP20 (ENSMODG00000000639) #12 MMP27 (ENSMODG00000000669) #13 MMP8 (ENSMODG00000000692) #15 MMP1 (ENSMODG00000000712) #17 MMP3 (ENSMODG00000000734) #18 ENSMODG00000000767 MMP13 (ENSMODG00000000794) #20 DCUN1D5 (ENSMODG00000000824) #21 DYNC2H1 (ENSMODG00000000925) #22 PDGFD (ENSMODG00000000942) #23 JRKL (ENSMODG00000024414) CCDC82 (ENSMODG00000000097) MAML2 (ENSMODG00000036741) MTMR2 (ENSMODG00000000116) CEP57 (ENSMODG00000000131) FAM76B (ENSMODG00000000139) SESN3 (ENSMODG00000000163) ENDOD1 (ENSMODG00000000165) ENSMODG00000000169 AMOTL1 (ENSMODG00000000180) PIWIL4 (ENSMODG00000000217) FUT4 (ENSMODG00000024373) ENSMODG00000028613 ENSMODG00000043171 Platypus MODERN SPECIES 12 ENSOANG00000010494 TRPC6 (ENSOANG00000010492) ANGPTL5 (ENSOANG00000010491) ENSOANG00000010490 CFAP300 (ENSOANG00000010489) YAP1 (ENSOANG00000010488) #7 ENSOANG00000010486 #9 ENSOANG00000046987 #10 ENSOANG00000047319 #11 MMP8 (ENSOANG00000010484) #15 MMP1 (ENSOANG00000010480) #17 ENSOANG00000010478 MMP13 (ENSOANG00000010477) #20 ENSOANG00000021139 #20 DCUN1D5 (ENSOANG00000010476) #21 DYNC2H1 (ENSOANG00000010474) #22 PDGFD (ENSOANG00000049229) #23 ENSOANG00000010472 GRIA4 (ENSOANG00000010470) #33 MSANTD4 (ENSOANG00000038526) #34 KBTBD3 (ENSOANG00000010467) #35 AASDHPPT (ENSOANG00000010465) #36 GUCY1A2 (ENSOANG00000010464) CWF19L2 (ENSOANG00000021142) ALKBH8 (ENSOANG00000010463) ELMOD1 (ENSOANG00000010462) ENSOANG00000048811 CUL5 (ENSOANG00000010459) ACAT1 (ENSOANG00000010458) NPAT (ENSOANG00000010457) ATM (ENSOANG00000006244) Sauria ANCESTRAL SPECIES 2 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000156340.b ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00960000189669 ENSGT00390000014721 ENSGT00390000009664 ENSGT00730000111225 ENSGT00950000182887.C.a.a.b ENSGT00390000010184 ENSGT00390000000527 ENSGT01030000234590.B.a.b ENSGT00390000009313 Lepidosauria ANCESTRAL SPECIES 17 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a ##17 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00960000189669 ENSGT00390000000527 ENSGT01030000234590.B.a.b ENSGT00390000009313 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT01070000254066 Episquamata ANCESTRAL SPECIES 2 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a.ic ##17 ENSGT00940000154907.a.a.jc ##17 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00960000189669 ENSGT00390000009313.g.a.a ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000159933 Laterata ANCESTRAL SPECIES 3 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a.ic ##17 ENSGT00940000154907.a.a.jc ##17 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.g.a.a ENSGT00390000009313.g.a.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 Common wall lizard MODERN SPECIES 12 CFAP300 (ENSPMRG00000009428) YAP1 (ENSPMRG00000009439) #7 ENSPMRG00000009446 #9 ENSPMRG00000009452 #10 ENSPMRG00000009459 ##17 ENSPMRG00000009481 ##17 ENSPMRG00000009487 MMP20 (ENSPMRG00000009495) #12 MMP27 (ENSPMRG00000009561) #13 MMP1 (ENSPMRG00000009900) #17 ENSPMRG00000009929 ENSPMRG00000009956 ENSPMRG00000010059 MMP13 (ENSPMRG00000010064) #20 DCUN1D5 (ENSPMRG00000010069) #21 DYNC2H1 (ENSPMRG00000010165) #22 ENSPMRG00000010794 PDGFD (ENSPMRG00000010801) #23 ENSPMRG00000010822 ENSPMRG00000010827 ENSPMRG00000010837 ENSPMRG00000010840 ENSPMRG00000010846 GRIA4 (ENSPMRG00000010863) #33 ENSPMRG00000010895 ENSPMRG00000010897 #34 KBTBD3 (ENSPMRG00000010900) #35 AASDHPPT (ENSPMRG00000010906) #36 ENSPMRG00000010930 GUCY1A2 (ENSPMRG00000010932) ENSPMRG00000010936 Argentine black and white tegu MODERN SPECIES 24 CENPJ (ENSSMRG00000012225) RNF17 (ENSSMRG00000012222) ARHGAP20 (ENSSMRG00000012203) ENSSMRG00000012187 ENSSMRG00000012184 ENSSMRG00000012138 ENSSMRG00000012134 ##17 MMP20 (ENSSMRG00000012132) #12 MMP27 (ENSSMRG00000012075) #13 ENSSMRG00000011863 #17 ENSSMRG00000011808 #17 ENSSMRG00000011799 ENSSMRG00000011798 MMP13 (ENSSMRG00000011797) #20 DCUN1D5 (ENSSMRG00000011796) #21 DYNC2H1 (ENSSMRG00000011354) #22 PDGFD (ENSSMRG00000011256) #23 GRIA4 (ENSSMRG00000011160) #33 MSANTD4 (ENSSMRG00000011059) #34 KBTBD3 (ENSSMRG00000011057) #35 AASDHPPT (ENSSMRG00000011056) #36 GUCY1A2 (ENSSMRG00000011053) ENSSMRG00000011037 ENSSMRG00000011036 CWF19L2 (ENSSMRG00000011005) ALKBH8 (ENSSMRG00000011004) ELMOD1 (ENSSMRG00000010965) SLC35F2 (ENSSMRG00000010961) RAB39A (ENSSMRG00000010960) CUL5 (ENSSMRG00000010946) ACAT1 (ENSSMRG00000010943) Toxicofera ANCESTRAL SPECIES 9 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a.ic ##17 ENSGT00940000154907.a.a.jc ##17 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.h.a.a ENSGT00960000189669 ENSGT00390000009313.g.a.a ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES ENSGT00940000154620.fc #22 Elapidae_a ANCESTRAL SPECIES 41 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a.ic ##17 ENSGT00940000154907.a.a.jc ##17 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620.fc #22 ENSGT00940000154620.gc #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT01010000230278 ENSGT00940000157765 ENSGT00390000009313.h.a.a ENSGT00960000189669 ENSGT00390000009313.g.a.a Acanthophiinae ANCESTRAL SPECIES ENSGT00940000154620.fc #22 Eastern brown snake DUPLICATION Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 33 ENSPTXG00000004953 CFAP300 (ENSPTXG00000004955) YAP1 (ENSPTXG00000004962) #7 ENSPTXG00000004966 #9 TMEM123 (ENSPTXG00000004967) #10 ENSPTXG00000004969 ##17 ENSPTXG00000004971 ##17 MMP20 (ENSPTXG00000004974) #12 MMP27 (ENSPTXG00000004979) #13 MMP1 (ENSPTXG00000005037) #17 ENSPTXG00000005052 ENSPTXG00000005053 MMP13 (ENSPTXG00000005055) #20 ENSPTXG00000005057 #20 DCUN1D5 (ENSPTXG00000005058) #21 ENSPTXG00000005059 #22 ENSPTXG00000005060 #22 ENSPTXG00000005062 #22 PDGFD (ENSPTXG00000005066) #23 GRIA4 (ENSPTXG00000005138) #33 MSANTD4 (ENSPTXG00000005661) #34 KBTBD3 (ENSPTXG00000005663) #35 AASDHPPT (ENSPTXG00000005664) #36 ENSPTXG00000005665 GUCY1A2 (ENSPTXG00000005666) ENSPTXG00000000158 ENSPTXG00000000172 Eastern brown snake MODERN SPECIES 33 YAP1 (ENSPTXG00000004962) #7 ENSPTXG00000004966 #9 TMEM123 (ENSPTXG00000004967) #10 ENSPTXG00000004969 ##17 ENSPTXG00000004971 ##17 MMP20 (ENSPTXG00000004974) #12 MMP27 (ENSPTXG00000004979) #13 MMP1 (ENSPTXG00000005037) #17 ENSPTXG00000005052 ENSPTXG00000005053 MMP13 (ENSPTXG00000005055) #20 ENSPTXG00000005057 #20 DCUN1D5 (ENSPTXG00000005058) #21 ENSPTXG00000005059 #22 ENSPTXG00000005060 #22 ENSPTXG00000005062 #22 PDGFD (ENSPTXG00000005066) #23 GRIA4 (ENSPTXG00000005138) #33 MSANTD4 (ENSPTXG00000005661) #34 KBTBD3 (ENSPTXG00000005663) #35 AASDHPPT (ENSPTXG00000005664) #36 ENSPTXG00000005665 GUCY1A2 (ENSPTXG00000005666) ENSPTXG00000000158 ENSPTXG00000000172 Eastern brown snake MODERN SPECIES 33 CFAP300 (ENSPTXG00000004955) YAP1 (ENSPTXG00000004962) #7 ENSPTXG00000004966 #9 TMEM123 (ENSPTXG00000004967) #10 ENSPTXG00000004969 ##17 ENSPTXG00000004971 ##17 MMP20 (ENSPTXG00000004974) #12 MMP27 (ENSPTXG00000004979) #13 MMP1 (ENSPTXG00000005037) #17 ENSPTXG00000005052 ENSPTXG00000005053 MMP13 (ENSPTXG00000005055) #20 ENSPTXG00000005057 #20 DCUN1D5 (ENSPTXG00000005058) #21 ENSPTXG00000005059 #22 ENSPTXG00000005060 #22 ENSPTXG00000005062 #22 PDGFD (ENSPTXG00000005066) #23 GRIA4 (ENSPTXG00000005138) #33 MSANTD4 (ENSPTXG00000005661) #34 KBTBD3 (ENSPTXG00000005663) #35 AASDHPPT (ENSPTXG00000005664) #36 ENSPTXG00000005665 GUCY1A2 (ENSPTXG00000005666) ENSPTXG00000000158 ENSPTXG00000000172 Blue-lipped sea krait MODERN SPECIES 4372 DCUN1D5 (ENSLLTG00000016498) #21 ENSLLTG00000016502 #22 Elapidae ANCESTRAL SPECIES 10 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a.ic ##17 ENSGT00940000154907.a.a.jc ##17 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620.gc #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT01010000230278 ENSGT00940000157765 ENSGT00960000189669 ENSGT00390000009313.g.a.a ENSGT00390000009313.h.b.a.a.a.a.a ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a Indian cobra MODERN SPECIES 4 ANGPTL5 (ENSNNAG00000011981) ENSNNAG00000011955 CFAP300 (ENSNNAG00000011854) YAP1 (ENSNNAG00000011815) #7 ENSNNAG00000011785 #9 TMEM123 (ENSNNAG00000011768) #10 ENSNNAG00000011741 ##17 MMP20 (ENSNNAG00000011646) #12 MMP27 (ENSNNAG00000011591) #13 MMP1 (ENSNNAG00000011567) #17 ENSNNAG00000011218 ENSNNAG00000011076 MMP13 (ENSNNAG00000011024) #20 ENSNNAG00000010976 #20 DCUN1D5 (ENSNNAG00000010943) #21 DYNC2H1 (ENSNNAG00000010349) #22 PDGFD (ENSNNAG00000010165) #23 GRIA4 (ENSNNAG00000009267) #33 MSANTD4 (ENSNNAG00000009206) #34 ENSNNAG00000009190 #35 AASDHPPT (ENSNNAG00000009056) #36 ENSNNAG00000009037 GUCY1A2 (ENSNNAG00000008983) ENSNNAG00000008963 ENSNNAG00000008944 ENSNNAG00000008926 ENSNNAG00000008899 ENSNNAG00000008864 ENSNNAG00000008840 ENSNNAG00000008824 ENSNNAG00000008804 Elapidae_a ANCESTRAL SPECIES 41 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a.ic ##17 ENSGT00940000154907.a.a.jc ##17 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620.fc #22 ENSGT00940000154620.gc #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT01010000230278 ENSGT00940000157765 ENSGT00390000009313.h.a.a ENSGT00960000189669 ENSGT00390000009313.g.a.a Blue-lipped sea krait MODERN SPECIES 1462 ENSLLTG00000011878 #22 Acanthophiinae ANCESTRAL SPECIES 42 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a.ic ##17 ENSGT00940000154907.a.a.jc ##17 ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620.gc #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT01010000230278 ENSGT00940000157765 ENSGT00390000009313.h.a.a ENSGT00960000189669 ENSGT00390000009313.g.a.a Mainland tiger snake MODERN SPECIES 75 ENSNSUG00000006043 ENSNSUG00000006044 CFAP300 (ENSNSUG00000006047) YAP1 (ENSNSUG00000006048) #7 ENSNSUG00000006049 #9 TMEM123 (ENSNSUG00000006089) #10 ENSNSUG00000006090 ##17 ENSNSUG00000006143 ##17 MMP20 (ENSNSUG00000006145) #12 MMP27 (ENSNSUG00000006147) #13 MMP1 (ENSNSUG00000006148) #17 ENSNSUG00000006288 MMP13 (ENSNSUG00000006375) #20 ENSNSUG00000006379 #20 DCUN1D5 (ENSNSUG00000006380) #21 DYNC2H1 (ENSNSUG00000006381) #22 PDGFD (ENSNSUG00000006385) #23 GRIA4 (ENSNSUG00000006438) #33 MSANTD4 (ENSNSUG00000006507) #34 KBTBD3 (ENSNSUG00000006515) #35 AASDHPPT (ENSNSUG00000006517) #36 GUCY1A2 (ENSNSUG00000006518) ENSNSUG00000006521 ENSNSUG00000006523 Lizard MODERN SPECIES 2 ENSACAG00000035332 YAP1 (ENSACAG00000012742) #7 ENSACAG00000012650 #9 ENSACAG00000012648 #10 ENSACAG00000012635 ENSACAG00000026401 ##17 MMP20 (ENSACAG00000021026) #12 MMP27 (ENSACAG00000025988) #13 ENSACAG00000040392 #17 ENSACAG00000012632 #17 ENSACAG00000012628 ENSACAG00000039814 ENSACAG00000023762 MMP13 (ENSACAG00000012443) #20 DCUN1D5 (ENSACAG00000012400) #21 DYNC2H1 (ENSACAG00000011923) #22 PDGFD (ENSACAG00000011867) #23 GRIA4 (ENSACAG00000011167) #33 MSANTD4 (ENSACAG00000011157) #34 KBTBD3 (ENSACAG00000011146) #35 AASDHPPT (ENSACAG00000011121) #36 ENSACAG00000035759 GUCY1A2 (ENSACAG00000011056) ENSACAG00000036271 ENSACAG00000028881 ENSACAG00000042797 ENSACAG00000039444 ENSACAG00000035285 ENSACAG00000028389 ENSACAG00000045159 ENSACAG00000011039 tuatara MODERN SPECIES 1676 MMP13 (ENSSPUG00000010429) #20 ENSSPUG00000010470 #20 DCUN1D5 (ENSSPUG00000010486) #21 DYNC2H1 (ENSSPUG00000010539) #22 PDGFD (ENSSPUG00000010745) #23 Archelosauria ANCESTRAL SPECIES ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000156340.b ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00960000189669 ENSGT00390000009313.i.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000159933 Cryptodira ANCESTRAL SPECIES ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a ##17 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00960000189669 ENSGT00390000009313.i.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 Testudinoidea ANCESTRAL SPECIES 1 ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a ##17 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491.a.a ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765.a ENSGT00960000189669 ENSGT00390000009313.i.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 Emydidae ANCESTRAL SPECIES 19 ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a ##17 ENSGT00940000161159 #13 ENSGT00940000154907.b.h.a #17 ENSGT00940000154907.b.h.b #17 ENSGT00940000166491.a.a ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765.a ENSGT00960000189669 ENSGT00390000009313.i.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E Three-toed box turtle MODERN SPECIES 65 MMP13 (ENSTMTG00000008496) #20 ENSTMTG00000008544 #20 DCUN1D5 (ENSTMTG00000008801) #21 DYNC2H1 (ENSTMTG00000008847) #22 PDGFD (ENSTMTG00000009069) #23 ENSTMTG00000009152 GRIA4 (ENSTMTG00000009194) #33 MSANTD4 (ENSTMTG00000009855) #34 KBTBD3 (ENSTMTG00000009877) #35 AASDHPPT (ENSTMTG00000009893) #36 GUCY1A2 (ENSTMTG00000009909) CWF19L2 (ENSTMTG00000009945) ALKBH8 (ENSTMTG00000009987) ELMOD1 (ENSTMTG00000010019) SLC35F2 (ENSTMTG00000010053) RAB39A (ENSTMTG00000010083) CUL5 (ENSTMTG00000010107) ACAT1 (ENSTMTG00000010178) NPAT (ENSTMTG00000010201) painted turtle MODERN SPECIES 2367 ENSCPBG00000027411 TRPC6 (ENSCPBG00000027413) ANGPTL5 (ENSCPBG00000027415) CEP126 (ENSCPBG00000027420) YAP1 (ENSCPBG00000027430) #7 ENSCPBG00000027435 #9 TMEM123 (ENSCPBG00000027438) #10 ENSCPBG00000027439 ##17 MMP27 (ENSCPBG00000027441) #13 ENSCPBG00000027443 #17 ENSCPBG00000027444 #17 ENSCPBG00000027446 MMP13 (ENSCPBG00000027449) #20 ENSCPBG00000027454 #20 DCUN1D5 (ENSCPBG00000027458) #21 DYNC2H1 (ENSCPBG00000027489) #22 ADCYAP1 (ENSCPBG00000027547) YES1 (ENSCPBG00000027548) ENOSF1 (ENSCPBG00000027551) TYMS (ENSCPBG00000027552) CLUL1 (ENSCPBG00000027553) COLEC12 (ENSCPBG00000027554) THOC1 (ENSCPBG00000027558) USP14 (ENSCPBG00000027561) ROCK1 (ENSCPBG00000027564) ENSCPBG00000027568 GREB1L (ENSCPBG00000027577) ESCO1 (ENSCPBG00000027599) ABHD3 (ENSCPBG00000027604) MIB1 (ENSCPBG00000027607) GATA6 (ENSCPBG00000027614) Testudinidae ANCESTRAL SPECIES ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000154907.a.a ##17 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491.a.b ENSGT00940000166491.a.a ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765.a ENSGT00390000009313.i.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000168471 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E Goode s thornscrub tortoise MODERN SPECIES TRPC6 (ENSGEVG00005008171) ANGPTL5 (ENSGEVG00005008220) CEP126 (ENSGEVG00005008250) CFAP300 (ENSGEVG00005008286) YAP1 (ENSGEVG00005008309) #7 ENSGEVG00005008335 #9 MMP7 (ENSGEVG00005008346) #11 MMP27 (ENSGEVG00005008369) #13 MMP1 (ENSGEVG00005008386) #17 ENSGEVG00005008403 ENSGEVG00005008434 ENSGEVG00005008551 ENSGEVG00005009550 MMP13 (ENSGEVG00005009634) #20 DCUN1D5 (ENSGEVG00005009736) #21 DYNC2H1 (ENSGEVG00005009816) #22 PDGFD (ENSGEVG00005010619) #23 GRIA4 (ENSGEVG00005010983) #33 MSANTD4 (ENSGEVG00005012006) #34 ENSGEVG00005012021 KBTBD3 (ENSGEVG00005012066) #35 AASDHPPT (ENSGEVG00005012085) #36 GUCY1A2 (ENSGEVG00005012110) ENSGEVG00005012190 CWF19L2 (ENSGEVG00005012229) ALKBH8 (ENSGEVG00005012274) ELMOD1 (ENSGEVG00005012329) SLC35F2 (ENSGEVG00005012399) RAB39A (ENSGEVG00005012426) CUL5 (ENSGEVG00005012461) ACAT1 (ENSGEVG00005012589) Abingdon island giant tortoise MODERN SPECIES 2209 ENSCABG00000003890 ENSCABG00000003880 MMP13 (ENSCABG00000003737) #20 DCUN1D5 (ENSCABG00000003712) #21 DYNC2H1 (ENSCABG00000003673) #22 Chinese turtle MODERN SPECIES 1126 ENSPSIG00000016199 #13 ENSPSIG00000016180 #13 MMP1 (ENSPSIG00000016132) #17 ENSPSIG00000016058 ENSPSIG00000015883 MMP13 (ENSPSIG00000015778) #20 DCUN1D5 (ENSPSIG00000015736) #21 ENSPSIG00000001205 DYNC2H1 (ENSPSIG00000013885) #22 PDGFD (ENSPSIG00000013596) #23 GRIA4 (ENSPSIG00000013038) #33 MSANTD4 (ENSPSIG00000013029) #34 KBTBD3 (ENSPSIG00000013026) #35 AASDHPPT (ENSPSIG00000012757) #36 GUCY1A2 (ENSPSIG00000012663) ENSPSIG00000012551 CWF19L2 (ENSPSIG00000011670) ALKBH8 (ENSPSIG00000011627) ELMOD1 (ENSPSIG00000011240) SLC35F2 (ENSPSIG00000011203) ENSPSIG00000001189 RAB39A (ENSPSIG00000011182) CUL5 (ENSPSIG00000009759) ACAT1 (ENSPSIG00000008845) Archosauria ANCESTRAL SPECIES 2 ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000156340.b ENSGT00940000161277 #12 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.i.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E Australian saltwater crocodile MODERN SPECIES 27 CEP126 (ENSCPRG00005014875) CFAP300 (ENSCPRG00005014867) YAP1 (ENSCPRG00005014865) #7 ENSCPRG00005014841 #9 TMEM123 (ENSCPRG00005014837) #10 MMP7 (ENSCPRG00005014833) #11 ENSCPRG00005014829 #11 ENSCPRG00005014827 MMP20 (ENSCPRG00005014825) #12 MMP27 (ENSCPRG00005014809) #13 ENSCPRG00005014787 #17 ENSCPRG00005014782 #17 ENSCPRG00005014772 MMP13 (ENSCPRG00005014705) #20 DCUN1D5 (ENSCPRG00005014689) #21 DYNC2H1 (ENSCPRG00005014624) #22 PDGFD (ENSCPRG00005014563) #23 ENSCPRG00005014543 GRIA4 (ENSCPRG00005014529) #33 ENSCPRG00005014505 MSANTD4 (ENSCPRG00005014484) #34 KBTBD3 (ENSCPRG00005014482) #35 AASDHPPT (ENSCPRG00005014479) #36 GUCY1A2 (ENSCPRG00005014457) ENSCPRG00005014405 ENSCPRG00005014368 ENSCPRG00005014364 ELMOD1 (ENSCPRG00005014358) SLC35F2 (ENSCPRG00005014342) RAB39A (ENSCPRG00005014334) CUL5 (ENSCPRG00005014213) Aves ANCESTRAL SPECIES ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000154907.a.a ##17 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.i.b.b ENSGT00390000009313.i.b.a ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 African ostrich MODERN SPECIES 1026 YAP1 (ENSSCUG00000016338) #7 ENSSCUG00000016336 #9 ENSSCUG00000016331 #10 ENSSCUG00000016328 ##17 MMP27 (ENSSCUG00000016323) #13 MMP1 (ENSSCUG00000016322) #17 ENSSCUG00000016319 ENSSCUG00000016315 MMP13 (ENSSCUG00000016309) #20 DCUN1D5 (ENSSCUG00000016305) #21 DYNC2H1 (ENSSCUG00000016290) #22 Neognathae ANCESTRAL SPECIES 1 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000154907.a.a ##17 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.i.b.b ENSGT00390000009313.i.b.a ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 Neognathae_b ANCESTRAL SPECIES ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000154907.a.a ##17 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.i.b.b ENSGT00390000009313.i.b.a ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 Neognathae_c ANCESTRAL SPECIES 11 ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E ENSGT00390000012388 Golden eagle MODERN SPECIES 10 PGR (ENSACCG00020008798) TRPC6 (ENSACCG00020008765) ANGPTL5 (ENSACCG00020008738) CEP126 (ENSACCG00020008718) CFAP300 (ENSACCG00020008702) YAP1 (ENSACCG00020008686) #7 ENSACCG00020008627 #9 TMEM123 (ENSACCG00020008603) #10 ENSACCG00020008585 MMP27 (ENSACCG00020008570) #13 MMP1 (ENSACCG00020008549) #17 ENSACCG00020008528 ENSACCG00020008499 MMP13 (ENSACCG00020008442) #20 DCUN1D5 (ENSACCG00020008426) #21 DYNC2H1 (ENSACCG00020008188) #22 PDGFD (ENSACCG00020007995) #23 GRIA4 (ENSACCG00020007893) #33 MSANTD4 (ENSACCG00020007849) #34 KBTBD3 (ENSACCG00020007839) #35 AASDHPPT (ENSACCG00020007826) #36 GUCY1A2 (ENSACCG00020007814) ENSACCG00020007804 CWF19L2 (ENSACCG00020007775) ALKBH8 (ENSACCG00020007723) ELMOD1 (ENSACCG00020007666) ENSACCG00020007640 SLC35F2 (ENSACCG00020007627) RAB39A (ENSACCG00020007616) CUL5 (ENSACCG00020007549) ACAT1 (ENSACCG00020007443) Kakapo MODERN SPECIES 11 ARHGAP42 (ENSSHBG00005003000) PGR (ENSSHBG00005002963) TRPC6 (ENSSHBG00005002929) ANGPTL5 (ENSSHBG00005002883) ENSSHBG00005002857 ENSSHBG00005002847 YAP1 (ENSSHBG00005002837) #7 ENSSHBG00005002816 #9 TMEM123 (ENSSHBG00005002791) #10 MMP7 (ENSSHBG00005002758) #11 MMP27 (ENSSHBG00005002736) #13 MMP1 (ENSSHBG00005002695) #17 ENSSHBG00005002636 MMP13 (ENSSHBG00005002584) #20 DCUN1D5 (ENSSHBG00005002553) #21 DYNC2H1 (ENSSHBG00005002058) #22 PDGFD (ENSSHBG00005001760) #23 GRIA4 (ENSSHBG00005001636) #33 MSANTD4 (ENSSHBG00005001565) #34 KBTBD3 (ENSSHBG00005001552) #35 AASDHPPT (ENSSHBG00005001507) #36 GUCY1A2 (ENSSHBG00005001462) CWF19L2 (ENSSHBG00005001417) ALKBH8 (ENSSHBG00005000442) ELMOD1 (ENSSHBG00005014397) ENSSHBG00005014387 ENSSHBG00005014382 SLC35F2 (ENSSHBG00005014363) RAB39A (ENSSHBG00005014353) CUL5 (ENSSHBG00005014329) ACAT1 (ENSSHBG00005014305) Passeriformes ANCESTRAL SPECIES 1 ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a ##17 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.i.b.b ENSGT00390000009313.i.b.a ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a ##17 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.i.b.b ENSGT00390000009313.i.b.a ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E Passeriformes_g ANCESTRAL SPECIES 2 ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a ##17 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.i.b.b ENSGT00390000009313.i.b.a ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000243635 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 Medium ground finch MODERN SPECIES 5 ARHGAP42 (ENSGFOG00000003106) TRPC6 (ENSGFOG00000003038) ANGPTL5 (ENSGFOG00000003011) ENSGFOG00000002958 CFAP300 (ENSGFOG00000002923) YAP1 (ENSGFOG00000002832) #7 ENSGFOG00000002791 #9 TMEM123 (ENSGFOG00000002771) #10 ENSGFOG00000002758 #20 MMP27 (ENSGFOG00000002634) #13 MMP1 (ENSGFOG00000002501) #17 ENSGFOG00000002382 ENSGFOG00000002073 MMP13 (ENSGFOG00000002018) #20 DCUN1D5 (ENSGFOG00000001988) #21 DYNC2H1 (ENSGFOG00000000922) #22 PDGFD (ENSGFOG00000000011) #23 GRIA4 (ENSGFOG00000008060) #33 MSANTD4 (ENSGFOG00000008043) #34 KBTBD3 (ENSGFOG00000008040) #35 AASDHPPT (ENSGFOG00000008033) #36 GUCY1A2 (ENSGFOG00000008028) ENSGFOG00000008024 ENSGFOG00000008018 CWF19L2 (ENSGFOG00000008003) ALKBH8 (ENSGFOG00000007993) ELMOD1 (ENSGFOG00000007977) ENSGFOG00000007975 SLC35F2 (ENSGFOG00000007964) RAB39A (ENSGFOG00000007927) CUL5 (ENSGFOG00000007911) Passeroidea ANCESTRAL SPECIES 5 ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000154907.a.a ##17 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.i.b.b ENSGT00390000009313.i.b.a ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01040000243635 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 Zebra finch MODERN SPECIES TRPC6 (ENSTGUG00000012766) ENSTGUG00000022925 ANGPTL5 (ENSTGUG00000024680) ENSTGUG00000012764 CFAP300 (ENSTGUG00000012760) YAP1 (ENSTGUG00000012754) #7 ENSTGUG00000012745 #9 TMEM123 (ENSTGUG00000027337) #10 ENSTGUG00000018460 #20 MMP27 (ENSTGUG00000023611) #13 MMP1 (ENSTGUG00000012737) #17 ENSTGUG00000012735 ENSTGUG00000028841 MMP13 (ENSTGUG00000012726) #20 DCUN1D5 (ENSTGUG00000020472) #21 DYNC2H1 (ENSTGUG00000012697) #22 PDGFD (ENSTGUG00000012693) #23 GRIA4 (ENSTGUG00000012676) #33 MSANTD4 (ENSTGUG00000027619) #34 KBTBD3 (ENSTGUG00000027073) #35 AASDHPPT (ENSTGUG00000020920) #36 GUCY1A2 (ENSTGUG00000012667) ENSTGUG00000012665 ENSTGUG00000024944 CWF19L2 (ENSTGUG00000012664) ALKBH8 (ENSTGUG00000012660) ELMOD1 (ENSTGUG00000012657) ENSTGUG00000012656 SLC35F2 (ENSTGUG00000012641) RAB39A (ENSTGUG00000029732) CUL5 (ENSTGUG00000012650) Common canary MODERN SPECIES 4 PGR (ENSSCAG00000003909) TRPC6 (ENSSCAG00000003932) ANGPTL5 (ENSSCAG00000003952) ENSSCAG00000003957 CFAP300 (ENSSCAG00000003962) YAP1 (ENSSCAG00000003972) #7 ENSSCAG00000003981 #9 TMEM123 (ENSSCAG00000003984) #10 ENSSCAG00000003992 ##17 MMP27 (ENSSCAG00000003998) #13 MMP1 (ENSSCAG00000004003) #17 ENSSCAG00000004010 ENSSCAG00000004017 MMP13 (ENSSCAG00000004033) #20 DCUN1D5 (ENSSCAG00000004037) #21 DYNC2H1 (ENSSCAG00000004049) #22 PDGFD (ENSSCAG00000004095) #23 GRIA4 (ENSSCAG00000004160) #33 MSANTD4 (ENSSCAG00000004441) #34 KBTBD3 (ENSSCAG00000004445) #35 AASDHPPT (ENSSCAG00000004448) #36 GUCY1A2 (ENSSCAG00000004475) ENSSCAG00000004484 ENSSCAG00000004486 CWF19L2 (ENSSCAG00000004490) ALKBH8 (ENSSCAG00000004497) ELMOD1 (ENSSCAG00000004505) SLC35F2 (ENSSCAG00000004515) DDX10 (ENSSCAG00000004532) ENSSCAG00000004593 POGLUT3 (ENSSCAG00000004603) Flycatcher MODERN SPECIES PGR (ENSFALG00000000354) TRPC6 (ENSFALG00000000356) ANGPTL5 (ENSFALG00000000357) ENSFALG00000000358 CFAP300 (ENSFALG00000000361) YAP1 (ENSFALG00000000364) #7 ENSFALG00000000370 #9 ENSFALG00000000371 ENSFALG00000000372 ##17 MMP27 (ENSFALG00000000375) #13 MMP1 (ENSFALG00000000382) #17 ENSFALG00000000394 ENSFALG00000000397 MMP13 (ENSFALG00000000400) #20 DCUN1D5 (ENSFALG00000000403) #21 DYNC2H1 (ENSFALG00000000411) #22 PDGFD (ENSFALG00000000415) #23 GRIA4 (ENSFALG00000000431) #33 MSANTD4 (ENSFALG00000000440) #34 KBTBD3 (ENSFALG00000023390) #35 AASDHPPT (ENSFALG00000000443) #36 GUCY1A2 (ENSFALG00000000486) ENSFALG00000000482 CWF19L2 (ENSFALG00000000479) ALKBH8 (ENSFALG00000000478) ELMOD1 (ENSFALG00000000474) SLC35F2 (ENSFALG00000000466) RAB39A (ENSFALG00000026560) CUL5 (ENSFALG00000000461) ENSFALG00000014232 ACAT1 (ENSFALG00000000459) Great tit DUPLICATION Great tit MODERN SPECIES PGR (ENSPMJG00000017851) TRPC6 (ENSPMJG00000017850) ANGPTL5 (ENSPMJG00000017849) ENSPMJG00000017848 CFAP300 (ENSPMJG00000017846) YAP1 (ENSPMJG00000017845) #7 ENSPMJG00000017843 #9 TMEM123 (ENSPMJG00000017842) #10 ENSPMJG00000017841 ##17 MMP27 (ENSPMJG00000017840) #13 MMP1 (ENSPMJG00000017839) #17 ENSPMJG00000017838 ENSPMJG00000017837 MMP13 (ENSPMJG00000017836) #20 DCUN1D5 (ENSPMJG00000017835) #21 ENSPMJG00000017834 #22 ENSPMJG00000017833 #22 PDGFD (ENSPMJG00000017831) #23 GRIA4 (ENSPMJG00000017826) #33 MSANTD4 (ENSPMJG00000017825) #34 KBTBD3 (ENSPMJG00000017824) #35 AASDHPPT (ENSPMJG00000017823) #36 GUCY1A2 (ENSPMJG00000017822) ENSPMJG00000017821 ENSPMJG00000017820 CWF19L2 (ENSPMJG00000017819) ALKBH8 (ENSPMJG00000017818) ELMOD1 (ENSPMJG00000017817) SLC35F2 (ENSPMJG00000017792) RAB39A (ENSPMJG00000017791) CUL5 (ENSPMJG00000017790) Great tit MODERN SPECIES TRPC6 (ENSPMJG00000017850) ANGPTL5 (ENSPMJG00000017849) ENSPMJG00000017848 CFAP300 (ENSPMJG00000017846) YAP1 (ENSPMJG00000017845) #7 ENSPMJG00000017843 #9 TMEM123 (ENSPMJG00000017842) #10 ENSPMJG00000017841 ##17 MMP27 (ENSPMJG00000017840) #13 MMP1 (ENSPMJG00000017839) #17 ENSPMJG00000017838 ENSPMJG00000017837 MMP13 (ENSPMJG00000017836) #20 DCUN1D5 (ENSPMJG00000017835) #21 ENSPMJG00000017834 #22 ENSPMJG00000017833 #22 PDGFD (ENSPMJG00000017831) #23 GRIA4 (ENSPMJG00000017826) #33 MSANTD4 (ENSPMJG00000017825) #34 KBTBD3 (ENSPMJG00000017824) #35 AASDHPPT (ENSPMJG00000017823) #36 GUCY1A2 (ENSPMJG00000017822) ENSPMJG00000017821 ENSPMJG00000017820 CWF19L2 (ENSPMJG00000017819) ALKBH8 (ENSPMJG00000017818) ELMOD1 (ENSPMJG00000017817) SLC35F2 (ENSPMJG00000017792) RAB39A (ENSPMJG00000017791) CUL5 (ENSPMJG00000017790) ACAT1 (ENSPMJG00000017787) Galloanserae ANCESTRAL SPECIES 1 ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.i.b.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E Anatidae ANCESTRAL SPECIES 16 ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903 #11 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.i.b.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E Duck DUPLICATION Duck DUPLICATION Duck MODERN SPECIES ANGPTL5 (ENSAPLG00000004584) ENSAPLG00000004690 CFAP300 (ENSAPLG00000004970) YAP1 (ENSAPLG00000005062) #7 ENSAPLG00000005387 #9 TMEM123 (ENSAPLG00000005784) #10 MMP7 (ENSAPLG00000005792) #11 MMP27 (ENSAPLG00000005931) #13 MMP1 (ENSAPLG00000005987) #17 ENSAPLG00000026248 ENSAPLG00000006797 MMP13 (ENSAPLG00000007468) #20 DCUN1D5 (ENSAPLG00000008281) #21 ENSAPLG00000008375 #22 ENSAPLG00000020307 #22 ENSAPLG00000030587 #22 ENSAPLG00000029249 PDGFD (ENSAPLG00000009485) #23 GRIA4 (ENSAPLG00000012015) #33 MSANTD4 (ENSAPLG00000011957) #34 KBTBD3 (ENSAPLG00000018868) #35 AASDHPPT (ENSAPLG00000011885) #36 ENSAPLG00000028324 GUCY1A2 (ENSAPLG00000016270) ENSAPLG00000019183 CWF19L2 (ENSAPLG00000016072) ALKBH8 (ENSAPLG00000015851) ELMOD1 (ENSAPLG00000015529) SLC35F2 (ENSAPLG00000015302) RAB39A (ENSAPLG00000015262) CUL5 (ENSAPLG00000015028) Duck MODERN SPECIES PGR (ENSAPLG00000003887) TRPC6 (ENSAPLG00000004017) ANGPTL5 (ENSAPLG00000004584) ENSAPLG00000004690 CFAP300 (ENSAPLG00000004970) YAP1 (ENSAPLG00000005062) #7 ENSAPLG00000005387 #9 TMEM123 (ENSAPLG00000005784) #10 MMP7 (ENSAPLG00000005792) #11 MMP27 (ENSAPLG00000005931) #13 MMP1 (ENSAPLG00000005987) #17 ENSAPLG00000026248 ENSAPLG00000006797 MMP13 (ENSAPLG00000007468) #20 DCUN1D5 (ENSAPLG00000008281) #21 ENSAPLG00000008375 #22 ENSAPLG00000020307 #22 ENSAPLG00000030587 #22 ENSAPLG00000029249 PDGFD (ENSAPLG00000009485) #23 GRIA4 (ENSAPLG00000012015) #33 MSANTD4 (ENSAPLG00000011957) #34 KBTBD3 (ENSAPLG00000018868) #35 AASDHPPT (ENSAPLG00000011885) #36 ENSAPLG00000028324 GUCY1A2 (ENSAPLG00000016270) ENSAPLG00000019183 CWF19L2 (ENSAPLG00000016072) ALKBH8 (ENSAPLG00000015851) ELMOD1 (ENSAPLG00000015529) SLC35F2 (ENSAPLG00000015302) Duck MODERN SPECIES TRPC6 (ENSAPLG00000004017) ANGPTL5 (ENSAPLG00000004584) ENSAPLG00000004690 CFAP300 (ENSAPLG00000004970) YAP1 (ENSAPLG00000005062) #7 ENSAPLG00000005387 #9 TMEM123 (ENSAPLG00000005784) #10 MMP7 (ENSAPLG00000005792) #11 MMP27 (ENSAPLG00000005931) #13 MMP1 (ENSAPLG00000005987) #17 ENSAPLG00000026248 ENSAPLG00000006797 MMP13 (ENSAPLG00000007468) #20 DCUN1D5 (ENSAPLG00000008281) #21 ENSAPLG00000008375 #22 ENSAPLG00000020307 #22 ENSAPLG00000030587 #22 ENSAPLG00000029249 PDGFD (ENSAPLG00000009485) #23 GRIA4 (ENSAPLG00000012015) #33 MSANTD4 (ENSAPLG00000011957) #34 KBTBD3 (ENSAPLG00000018868) #35 AASDHPPT (ENSAPLG00000011885) #36 ENSAPLG00000028324 GUCY1A2 (ENSAPLG00000016270) ENSAPLG00000019183 CWF19L2 (ENSAPLG00000016072) ALKBH8 (ENSAPLG00000015851) ELMOD1 (ENSAPLG00000015529) SLC35F2 (ENSAPLG00000015302) RAB39A (ENSAPLG00000015262) Pink-footed goose MODERN SPECIES 135 ENSABRG00000009163 ANGPTL5 (ENSABRG00000009100) ENSABRG00000009078 CFAP300 (ENSABRG00000009072) YAP1 (ENSABRG00000009040) #7 ENSABRG00000009019 #9 TMEM123 (ENSABRG00000009015) #10 MMP7 (ENSABRG00000008989) #11 MMP27 (ENSABRG00000008965) #13 MMP1 (ENSABRG00000008947) #17 ENSABRG00000008802 ENSABRG00000008771 MMP13 (ENSABRG00000008766) #20 DCUN1D5 (ENSABRG00000008746) #21 DYNC2H1 (ENSABRG00000008204) #22 PDGFD (ENSABRG00000008147) #23 ENSABRG00000008125 ENSABRG00000008118 ENSABRG00000008103 #33 ENSABRG00000008076 MSANTD4 (ENSABRG00000008069) #34 KBTBD3 (ENSABRG00000008057) #35 AASDHPPT (ENSABRG00000008045) #36 GUCY1A2 (ENSABRG00000008026) Phasianidae ANCESTRAL SPECIES ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00950000182865.b.b.b.c.a.i.a.b.b ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.i.b.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E Japanese quail MODERN SPECIES ENSCJPG00005003791 ANGPTL5 (ENSCJPG00005003777) ENSCJPG00005003770 CFAP300 (ENSCJPG00005003768) YAP1 (ENSCJPG00005003761) #7 ENSCJPG00005003758 ENSCJPG00005003757 #9 TMEM123 (ENSCJPG00005003755) #10 ENSCJPG00005003728 #20 MMP27 (ENSCJPG00005003727) #13 MMP1 (ENSCJPG00005003596) #17 ENSCJPG00005003595 ENSCJPG00005003593 MMP13 (ENSCJPG00005003591) #20 DCUN1D5 (ENSCJPG00005003587) #21 ENSCJPG00005003535 #22 PDGFD (ENSCJPG00005003527) #23 ENSCJPG00005003519 GRIA4 (ENSCJPG00005003513) #33 MSANTD4 (ENSCJPG00005003512) #34 KBTBD3 (ENSCJPG00005003501) #35 AASDHPPT (ENSCJPG00005003500) #36 ENSCJPG00005003497 GUCY1A2 (ENSCJPG00005003494) ENSCJPG00005003492 CWF19L2 (ENSCJPG00005003482) ALKBH8 (ENSCJPG00005003481) ELMOD1 (ENSCJPG00005003480) SLC35F2 (ENSCJPG00005003450) ENSCJPG00005003449 CUL5 (ENSCJPG00005003447) Phasianidae_b ANCESTRAL SPECIES ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00950000182865.b.b.b.c.a.i.a.b.b ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000161159 #13 ENSGT00940000154907.b #17 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00390000009313.i.b.b ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT01030000234626.E Chicken MODERN SPECIES ENSGALG00010007959 ENSGALG00010007949 ANGPTL5 (ENSGALG00010007937) ENSGALG00010007933 C11orf70 (ENSGALG00010007928) YAP1 (ENSGALG00010007923) #7 BIRC2 (ENSGALG00010007658) #9 TMEM123 (ENSGALG00010007640) #10 MMP7 (ENSGALG00010007586) #20 MMP27 (ENSGALG00010007575) #13 MMP1 (ENSGALG00010007571) #17 ENSGALG00010007554 MMP10 (ENSGALG00010007546) MMP13 (ENSGALG00010007330) #20 DCUN1D5 (ENSGALG00010007532) #21 DYNC2H1 (ENSGALG00010005265) #22 PDGFD (ENSGALG00010005249) #23 ENSGALG00010005230 GRIA4 (ENSGALG00010005223) #33 MSANTD4 (ENSGALG00010005191) #34 KBTBD3 (ENSGALG00010005187) #35 AASDHPPT (ENSGALG00010005177) #36 GUCY1A2 (ENSGALG00010005167) VMO1 (ENSGALG00010005161) CWF19L2 (ENSGALG00010005154) ALKBH8 (ENSGALG00010004717) ELMOD1 (ENSGALG00010004669) SLN (ENSGALG00010004973) SLC35F2 (ENSGALG00010004967) RAB39A (ENSGALG00010004949) CUL5 (ENSGALG00010004901) Turkey DUPLICATION Turkey DUPLICATION Turkey DUPLICATION Turkey MODERN SPECIES ENSMGAG00000015155 ENSMGAG00000015156 ENSMGAG00000015157 ENSMGAG00000017848 ENSMGAG00000015158 ENSMGAG00000015159 ENSMGAG00000015160 #36 ENSMGAG00000015161 #35 ENSMGAG00000015162 #34 ENSMGAG00000019678 ENSMGAG00000021383 ENSMGAG00000018928 ENSMGAG00000021804 #22 ENSMGAG00000019247 #22 ENSMGAG00000015167 #22 ENSMGAG00000016922 #22 DCUN1D5 (ENSMGAG00000015168) #21 ENSMGAG00000020240 ENSMGAG00000016562 MMP13 (ENSMGAG00000015169) #20 ENSMGAG00000015171 #13 ENSMGAG00000015170 #17 ENSMGAG00000015172 #20 ENSMGAG00000015173 #10 ENSMGAG00000015174 #9 ENSMGAG00000015175 #7 ENSMGAG00000017853 ENSMGAG00000015176 ENSMGAG00000015177 ENSMGAG00000015178 ENSMGAG00000015179 Turkey MODERN SPECIES ENSMGAG00000015613 ENSMGAG00000015153 ENSMGAG00000015155 ENSMGAG00000015156 ENSMGAG00000015157 ENSMGAG00000017848 ENSMGAG00000015158 ENSMGAG00000015159 ENSMGAG00000015160 #36 ENSMGAG00000015161 #35 ENSMGAG00000015162 #34 ENSMGAG00000019678 ENSMGAG00000021383 ENSMGAG00000018928 ENSMGAG00000021804 #22 ENSMGAG00000019247 #22 ENSMGAG00000015167 #22 ENSMGAG00000016922 #22 DCUN1D5 (ENSMGAG00000015168) #21 ENSMGAG00000020240 ENSMGAG00000016562 MMP13 (ENSMGAG00000015169) #20 ENSMGAG00000015171 #13 ENSMGAG00000015170 #17 ENSMGAG00000015172 #20 ENSMGAG00000015173 #10 ENSMGAG00000015174 #9 ENSMGAG00000015175 #7 ENSMGAG00000017853 ENSMGAG00000015176 ENSMGAG00000015177 Turkey MODERN SPECIES ENSMGAG00000015153 ENSMGAG00000015155 ENSMGAG00000015156 ENSMGAG00000015157 ENSMGAG00000017848 ENSMGAG00000015158 ENSMGAG00000015159 ENSMGAG00000015160 #36 ENSMGAG00000015161 #35 ENSMGAG00000015162 #34 ENSMGAG00000019678 ENSMGAG00000021383 ENSMGAG00000018928 ENSMGAG00000021804 #22 ENSMGAG00000019247 #22 ENSMGAG00000015167 #22 ENSMGAG00000016922 #22 DCUN1D5 (ENSMGAG00000015168) #21 ENSMGAG00000020240 ENSMGAG00000016562 MMP13 (ENSMGAG00000015169) #20 ENSMGAG00000015171 #13 ENSMGAG00000015170 #17 ENSMGAG00000015172 #20 ENSMGAG00000015173 #10 ENSMGAG00000015174 #9 ENSMGAG00000015175 #7 ENSMGAG00000017853 ENSMGAG00000015176 ENSMGAG00000015177 ENSMGAG00000015178 Turkey MODERN SPECIES ENSMGAG00000015152 ENSMGAG00000015613 ENSMGAG00000015153 ENSMGAG00000015155 ENSMGAG00000015156 ENSMGAG00000015157 ENSMGAG00000017848 ENSMGAG00000015158 ENSMGAG00000015159 ENSMGAG00000015160 #36 ENSMGAG00000015161 #35 ENSMGAG00000015162 #34 ENSMGAG00000019678 ENSMGAG00000021383 ENSMGAG00000018928 ENSMGAG00000021804 #22 ENSMGAG00000019247 #22 ENSMGAG00000015167 #22 ENSMGAG00000016922 #22 DCUN1D5 (ENSMGAG00000015168) #21 ENSMGAG00000020240 ENSMGAG00000016562 MMP13 (ENSMGAG00000015169) #20 ENSMGAG00000015171 #13 ENSMGAG00000015170 #17 ENSMGAG00000015172 #20 ENSMGAG00000015173 #10 ENSMGAG00000015174 #9 ENSMGAG00000015175 #7 ENSMGAG00000017853 ENSMGAG00000015176 Anura ANCESTRAL SPECIES 28 ENSGT00940000159713 ENSGT01060000248588.a.d.a ENSGT00940000161966 ENSGT00390000013786 ENSGT00510000047559 ENSGT00510000046760.a #7 ENSGT00940000154175 #9 ENSGT00530000063929.b #10 ENSGT00940000160903.a #11 ENSGT00940000160903.b #11 ENSGT00940000161277 #12 ENSGT00940000165562 ENSGT00940000154907.b #17 ENSGT00940000157450 #20 ENSGT00940000156155 #21 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00940000158415 #35 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01070000254066 ENSGT00390000015655.a ENSGT00940000156648 ENSGT01030000234626.E ENSGT00390000012388 ENSGT00670000098061 Frog MODERN SPECIES 2 tmem123 (ENSXETG00000040034) #10 mmp3 (ENSXETG00000022185) #11 ENSXETG00000038461 #11 ENSXETG00000046841 ENSXETG00000042404 ENSXETG00000040194 #11 mmp13 (ENSXETG00000022190) #11 mmp20 (ENSXETG00000034187) #12 mmp8 (ENSXETG00000036861) ENSXETG00000031108 ENSXETG00000040632 mmp1 (ENSXETG00000022198) #17 mmp13l (ENSXETG00000022215) #20 ENSXETG00000037836 #20 dcun1d5 (ENSXETG00000022216) #21 dync2h1 (ENSXETG00000032809) #22 pdgfd (ENSXETG00000010500) #23 gria4 (ENSXETG00000021373) #33 msantd4 (ENSXETG00000021381) #34 kbtbd3 (ENSXETG00000021386) #35 aasdhppt (ENSXETG00000032901) #36 gucy1a2 (ENSXETG00000018493) cwf19l2 (ENSXETG00000018483) ENSXETG00000035543 alkbh8 (ENSXETG00000014487) elmod1 (ENSXETG00000038960) ENSXETG00000038149 ENSXETG00000044987 slc35f2 (ENSXETG00000014482) cul5 (ENSXETG00000034081) npat (ENSXETG00000014476) Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000004250 FDX1 (ENSLLEG00000004257) ENSLLEG00000004261 ENSLLEG00000012140 ARRB1 (ENSLLEG00000012277) ENSLLEG00000014020 ENSLLEG00000014047 ENSLLEG00000014070 ENSLLEG00000014087 ENSLLEG00000014114 ENSLLEG00000014144 ENSLLEG00000014166 ENSLLEG00000014228 ENSLLEG00000014273 ENSLLEG00000014365 DYNC2H1 (ENSLLEG00000014586) #22 ENSLLEG00000017270 ENSLLEG00000017288 ENSLLEG00000017320 PDGFD (ENSLLEG00000017360) #23 ENSLLEG00000017651 ENSLLEG00000017686 ENSLLEG00000017705 ENSLLEG00000017775 GRIA4 (ENSLLEG00000017858) #33 ENSLLEG00000018327 MSANTD4 (ENSLLEG00000018350) #34 ENSLLEG00000018439 KBTBD3 (ENSLLEG00000018490) #35 AASDHPPT (ENSLLEG00000018533) #36 ENSLLEG00000018672 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 684 ENSLACG00000015396 #11 ENSLACG00000015001 #11 ENSLACG00000014804 ##17 MMP20 (ENSLACG00000014582) #12 ENSLACG00000014097 ##17 ENSLACG00000013597 ##17 ENSLACG00000013502 ##17 MMP13 (ENSLACG00000013031) #20 DCUN1D5 (ENSLACG00000011146) #21 ENSLACG00000009671 #22 ENSLACG00000000931 #22 Coelacanth MODERN SPECIES 684 ENSLACG00000015396 #11 ENSLACG00000015001 #11 ENSLACG00000014804 ##17 MMP20 (ENSLACG00000014582) #12 ENSLACG00000014097 ##17 ENSLACG00000013597 ##17 ENSLACG00000013502 ##17 MMP13 (ENSLACG00000013031) #20 DCUN1D5 (ENSLACG00000011146) #21 ENSLACG00000009671 #22 ENSLACG00000000931 #22 Actinopterygii ANCESTRAL SPECIES 5 ENSGT00390000015987 ENSGT00940000153190.B.a ENSGT00940000160117 ENSGT00940000166267 ENSGT00940000154981 ENSGT00940000154174 ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336 ENSGT01030000234595.A.a ENSGT00940000155787 ENSGT00940000157301.b ENSGT00390000000303 ENSGT00940000157141 ENSGT00980000202145 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT01030000234886 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000165121 ENSGT00940000158132 ENSGT00390000018904 ENSGT00940000156648 Neopterygii ANCESTRAL SPECIES 50 ENSGT00390000015987 ENSGT00940000153190.B.a ENSGT00940000160117 ENSGT00940000166267 ENSGT00940000154981 ENSGT00940000154174 ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336 ENSGT01030000234595.A.a ENSGT00940000155787 ENSGT00940000157301.b ENSGT00390000000303 ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT01030000234886 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00940000159782 ENSGT00390000015655.a ENSGT00940000165121 ENSGT00940000158132 ENSGT00390000018904 ENSGT00940000156648 Spotted gar MODERN SPECIES 669 ENSLOCG00000007382 DEUP1 (ENSLOCG00000007351) SLC36A4 (ENSLOCG00000007325) mtnr1bb (ENSLOCG00000007314) fat3a (ENSLOCG00000007262) chordc1b (ENSLOCG00000007242) naalad2 (ENSLOCG00000007231) NOX4 (ENSLOCG00000007209) tyr (ENSLOCG00000007176) grm5b (ENSLOCG00000007164) ctsc (ENSLOCG00000007149) RAB38 (ENSLOCG00000007135) tmem135 (ENSLOCG00000007117) fzd4 (ENSLOCG00000007103) ENSLOCG00000007086 DYNC2H1 (ENSLOCG00000007034) #22 PDGFD (ENSLOCG00000007018) #23 gria4b (ENSLOCG00000006993) #33 MSANTD4 (ENSLOCG00000006951) #34 aasdhppt (ENSLOCG00000006918) #36 ENSLOCG00000006889 cwf19l2 (ENSLOCG00000006855) ALKBH8 (ENSLOCG00000006833) KBTBD3 (ENSLOCG00000006804) #35 elmod1 (ENSLOCG00000006784) slc35f2 (ENSLOCG00000006766) ENSLOCG00000006748 cul5a (ENSLOCG00000006732) dcun1d5 (ENSLOCG00000006719) #21 ENSLOCG00000006704 ompa (ENSLOCG00000018219) Osteoglossocephalai ANCESTRAL SPECIES 12 ENSGT00390000016789 ENSGT00510000047925 ENSGT00950000183078.b.a.a ENSGT00940000166338 ENSGT00940000166267.b ENSGT00940000154981.bb.b ENSGT00940000154174 ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157141 ENSGT00940000157301.b.f ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT01030000234886 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000015655.a.m.a ENSGT00940000156648 ENSGT00940000156155 #21 ENSGT00390000009497 ENSGT00940000156536.e.a ENSGT00940000155350.h Osteoglossiformes ANCESTRAL SPECIES 14 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925 ENSGT00950000183078.b.a.a ENSGT00940000166338 ENSGT00940000154174.eb ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b.d #33 ENSGT00440000039469 #34 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000015655.a.m.a ENSGT00940000159782.b ENSGT00940000156648.a.b ENSGT00940000156155.m #21 ENSGT00390000009497 ENSGT00940000155350.g ENSGT00940000156251.a ENSGT00950000182988.a.b.a.a Asian bonytongue MODERN SPECIES 1 anapc15 (ENSSFOG00015033360) tomt (ENSSFOG00015016320) ENSSFOG00015026836 lamtor1 (ENSSFOG00015032080) lrrc51 (ENSSFOG00015030124) NUMA1 (ENSSFOG00015016370) CHORDC1 (ENSSFOG00015016409) naalad2 (ENSSFOG00015016458) ENSSFOG00015016496 tyr (ENSSFOG00015016560) grm5b (ENSSFOG00015016586) ctsc (ENSSFOG00015031421) RAB38 (ENSSFOG00015032955) fzd4 (ENSSFOG00015016654) ENSSFOG00015016669 DYNC2H1 (ENSSFOG00015016725) #22 ENSSFOG00015026943 #23 GRIA4 (ENSSFOG00015016923) #33 ENSSFOG00015016955 ENSSFOG00015029593 trip12 (ENSSFOG00015016991) fbxo36b (ENSSFOG00015017082) ENSSFOG00015017088 RASA2 (ENSSFOG00015017105) ENSSFOG00015017168 ENSSFOG00015017219 atp1b3b (ENSSFOG00015017231) ece2b (ENSSFOG00015017271) ANO7 (ENSSFOG00015017392) rnf168 (ENSSFOG00015017412) ENSSFOG00015017442 P. kingsleyae MODERN SPECIES 46 anapc15 (ENSPKIG00000022993) tomt (ENSPKIG00000023006) ENSPKIG00000023020 lamtor1 (ENSPKIG00000023034) lrrc51 (ENSPKIG00000023052) ENSPKIG00000023065 ENSPKIG00000023088 chordc1b (ENSPKIG00000023107) ENSPKIG00000023153 naalad2 (ENSPKIG00000023233) tyr (ENSPKIG00000023265) grm5b (ENSPKIG00000023293) ctsc (ENSPKIG00000023330) RAB38 (ENSPKIG00000023351) fzd4 (ENSPKIG00000023363) DYNC2H1 (ENSPKIG00000023427) #22 PDGFD (ENSPKIG00000023533) #23 ENSPKIG00000023564 #33 ENSPKIG00000023582 #34 GUCY1A2 (ENSPKIG00000023593) cwf19l2 (ENSPKIG00000023622) ALKBH8 (ENSPKIG00000023662) KBTBD3 (ENSPKIG00000023695) #35 SLC35F2 (ENSPKIG00000023710) CUL5 (ENSPKIG00000023730) dcun1d5 (ENSPKIG00000023773) #21 ENSPKIG00000023806 CAPN5 (ENSPKIG00000023819) ompa (ENSPKIG00000023839) myo7aa (ENSPKIG00000023866) GDPD4 (ENSPKIG00000023910) Clupeocephala ANCESTRAL SPECIES 10 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925 ENSGT00950000183078.b.a.a ENSGT00940000166338 ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00980000202145 ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000015655.a.m.a ENSGT00940000156648 ENSGT00940000156155 #21 ENSGT00390000009497.b ENSGT00940000156536.e.a ENSGT00390000009497.a Otomorpha ANCESTRAL SPECIES 283 ENSGT00940000157403 ENSGT00940000156389.b ENSGT00720000108834 ENSGT00940000165072 ENSGT00940000159041 ENSGT00940000155435.B.a ENSGT00950000182887.C.b.a.m.b ENSGT00940000153936.a ENSGT00940000157650 ENSGT00390000013063.u ENSGT01050000244976.b.b.b.b.b.b ENSGT00940000155929.a.a ENSGT01090000260076.a ENSGT00980000202145 ENSGT00940000157141 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00940000155677.b #33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00940000159782.a.a Clupeiformes ANCESTRAL SPECIES 31 ENSGT00940000157403 ENSGT00940000156389.b ENSGT00720000108834 ENSGT00940000165072 ENSGT00940000159041 ENSGT00940000155435.B.a ENSGT00950000182887.C.b.a.m.b ENSGT00940000153936.a ENSGT00940000157650 ENSGT00390000013063.u ENSGT01050000244976.b.b.b.b.a ENSGT00940000155929.a.a ENSGT01090000260076.a ENSGT00980000202145 ENSGT00940000157141 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.b.m #33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00940000159782.a.a ENSGT00940000160533 ENSGT00530000064222.a ENSGT00940000158965 ENSGT00940000160957 ENSGT00940000165302 ENSGT00940000160692 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 25 zgc:162872 (ENSCHAG00000024232) IWS1 (ENSCHAG00000024200) ENSCHAG00000024189 DGKD (ENSCHAG00000023771) ENSCHAG00000023715 sagb (ENSCHAG00000023708) atg16l1 (ENSCHAG00000023463) cldn15lb (ENSCHAG00000023435) PARL (ENSCHAG00000023222) ENSCHAG00000023204 fgf12b (ENSCHAG00000023181) ENSCHAG00000023172 ENSCHAG00000023159 ENSCHAG00000023145 fzd4 (ENSCHAG00000023141) DYNC2H1 (ENSCHAG00000022972) #22 ENSCHAG00000022909 #22 PDGFD (ENSCHAG00000022757) #23 ENSCHAG00000019552 #33 MSANTD4 (ENSCHAG00000019421) #34 aasdhppt (ENSCHAG00000019413) #36 GUCY1A2 (ENSCHAG00000019404) cwf19l2 (ENSCHAG00000019309) ALKBH8 (ENSCHAG00000019170) KBTBD3 (ENSCHAG00000019161) #35 elmod1 (ENSCHAG00000019151) slc5a2 (ENSCHAG00000018925) fbxo46 (ENSCHAG00000018912) coq8b (ENSCHAG00000018315) numbl (ENSCHAG00000018287) ENSCHAG00000018016 Atlantic herring MODERN SPECIES 25 IWS1 (ENSCHAG00000024200) ENSCHAG00000024189 DGKD (ENSCHAG00000023771) ENSCHAG00000023715 sagb (ENSCHAG00000023708) atg16l1 (ENSCHAG00000023463) cldn15lb (ENSCHAG00000023435) PARL (ENSCHAG00000023222) ENSCHAG00000023204 fgf12b (ENSCHAG00000023181) ENSCHAG00000023172 ENSCHAG00000023159 ENSCHAG00000023145 fzd4 (ENSCHAG00000023141) DYNC2H1 (ENSCHAG00000022972) #22 ENSCHAG00000022909 #22 PDGFD (ENSCHAG00000022757) #23 ENSCHAG00000019552 #33 MSANTD4 (ENSCHAG00000019421) #34 aasdhppt (ENSCHAG00000019413) #36 GUCY1A2 (ENSCHAG00000019404) cwf19l2 (ENSCHAG00000019309) ALKBH8 (ENSCHAG00000019170) KBTBD3 (ENSCHAG00000019161) #35 elmod1 (ENSCHAG00000019151) slc5a2 (ENSCHAG00000018925) fbxo46 (ENSCHAG00000018912) coq8b (ENSCHAG00000018315) numbl (ENSCHAG00000018287) ENSCHAG00000018016 dpf1 (ENSCHAG00000017608) Denticle herring MODERN SPECIES 10 hdlbpa (ENSDCDG00000033096) ilkap (ENSDCDG00000033017) zgc:162872 (ENSDCDG00000033000) ENSDCDG00000032980 DGKD (ENSDCDG00000032514) ENSDCDG00000032470 sagb (ENSDCDG00000032408) atg16l1 (ENSDCDG00000032384) ENSDCDG00000032348 PARL (ENSDCDG00000032335) ENSDCDG00000032331 FGF12 (ENSDCDG00000032327) ENSDCDG00000032324 ENSDCDG00000032323 fzd4 (ENSDCDG00000032322) ENSDCDG00000032321 #22 PDGFD (ENSDCDG00000032319) #23 gria4b (ENSDCDG00000030940) #33 MSANTD4 (ENSDCDG00000030888) #34 aasdhppt (ENSDCDG00000030885) #36 GUCY1A2 (ENSDCDG00000030879) cwf19l2 (ENSDCDG00000030869) ALKBH8 (ENSDCDG00000030841) KBTBD3 (ENSDCDG00000030838) #35 slc5a2 (ENSDCDG00000030626) fbxo46 (ENSDCDG00000030617) coq8b (ENSDCDG00000029859) numbl (ENSDCDG00000029833) ENSDCDG00000029828 dpf1 (ENSDCDG00000029642) ENSDCDG00000029640 Otophysi ANCESTRAL SPECIES 132 ENSGT00940000165072 ENSGT00720000108834 ENSGT00940000156389.b ENSGT00940000157403 ENSGT00940000159041 ENSGT00940000155435.B.a ENSGT00950000182887.C.b.a.m.b ENSGT00940000153936.a ENSGT00940000157650 ENSGT00390000013063.u ENSGT01050000244976.b.b.b.b.b.b ENSGT00940000155929.a.a ENSGT01090000260076.a ENSGT00530000067879 ENSGT00940000157141 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00390000016789 ENSGT00510000047925 ENSGT00950000183078.b.a.a ENSGT00940000166338 ENSGT01100000263476.B.b.a.b ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a Cyprinoidei ANCESTRAL SPECIES 82 ENSGT00940000165072 ENSGT00720000108834 ENSGT00940000156389.b ENSGT00940000157403 ENSGT00940000159041 ENSGT00940000155435.B.a ENSGT00950000182887.C.b.a.m.b ENSGT00940000153936.a ENSGT00940000157650 ENSGT00390000013063.u ENSGT01050000244976.b.b.b.b.b.b ENSGT00940000155929.a.a ENSGT01090000260076.a ENSGT00530000067879 ENSGT00940000157141 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT01030000234886.e.a ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000154308.B.c.a.a.b ENSGT00390000016789 ENSGT00510000047925 ENSGT00950000183078.b.a.a ENSGT01100000263476.B.b.a.b.a ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 Zebrafish MODERN SPECIES 6 igsf11 (ENSDARG00000109783) ENSDARG00000097635 ENSDARG00000096990 si:ch1073-340i21.3 (ENSDARG00000088885) ENSDARG00000097973 lrfn1 (ENSDARG00000027602) ENSDARG00000057408 sagb (ENSDARG00000038378) atg16l1 (ENSDARG00000099430) cldn15lb (ENSDARG00000100844) PARL (ENSDARG00000020891) ENSDARG00000077316 fgf12b (ENSDARG00000113525) ENSDARG00000114719 ENSDARG00000103603 DYNC2H1 (ENSDARG00000113761) #22 PDGFD (ENSDARG00000077677) #23 ENSDARG00000116712 alp3 (ENSDARG00000098063) fam131ab (ENSDARG00000104296) gria4a (ENSDARG00000037496) ##33 MSANTD4 (ENSDARG00000018040) #34 aasdhppt (ENSDARG00000037501) #36 GUCY1A2 (ENSDARG00000093185) cwf19l2 (ENSDARG00000091760) zgc:162962 (ENSDARG00000116765) ENSDARG00000090304 ENSDARG00000099718 ENSDARG00000088039 ENSDARG00000114883 ENSDARG00000106724 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 591 ENSGT00940000159041.f ENSGT00940000155435.B.a.b ENSGT00390000013063.u.g ENSGT01050000244976.b.b.b.b.b.b.b ENSGT00940000155929.a.a.a.b ENSGT00940000153936.a.h.b ENSGT00940000157650 ENSGT00390000013063.u.h ENSGT01050000244976.b.b.b.b.b.b.a ENSGT00940000155929.a.a.b ENSGT01090000260076.a.db ENSGT00530000067879.e.b ENSGT00940000157141.c ENSGT00940000154620.c.a #22 ENSGT00940000154620.d #22 ENSGT00940000159575.b #23 ENSGT00940000155677.a.i.a ##33 Cyprininae_a ANCESTRAL SPECIES 477 ENSGT00940000156392.a.a ENSGT00720000108834.e ENSGT00940000156389.b ENSGT00940000157403 ENSGT00940000159041.e ENSGT00940000155435.B.a.a ENSGT00950000182887.C.b.a.m.b.d ENSGT00940000153936.a.h.b ENSGT00940000157650 ENSGT00390000013063.u.h ENSGT01050000244976.b.b.b.b.b.b.a ENSGT00940000155929.a.a.b ENSGT01090000260076.a.db.b ENSGT00530000067879.e.b ENSGT00940000157141.c ENSGT00940000154620.c.a #22 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 435 ENSSGRG00000051944 IWS1 (ENSSGRG00000051943) ilkap (ENSSGRG00000051942) DGKD (ENSSGRG00000051938) ENSSGRG00000051936 sagb (ENSSGRG00000051934) ENSSGRG00000051932 atg16l1 (ENSSGRG00000051905) cldn15lb (ENSSGRG00000051896) ENSSGRG00000051895 ENSSGRG00000051893 fgf12b (ENSSGRG00000051877) ENSSGRG00000051875 ENSSGRG00000051874 fzd4 (ENSSGRG00000051873) DYNC2H1 (ENSSGRG00000051799) #22 Golden-line barbel MODERN SPECIES 1107 ENSSGRG00000016077 #22 ENSSGRG00000016076 #22 PDGFD (ENSSGRG00000016074) #23 gria4a (ENSSGRG00000014952) ##33 MSANTD4 (ENSSGRG00000014943) #34 aasdhppt (ENSSGRG00000014941) #36 GUCY1A2 (ENSSGRG00000014940) CWF19L2 (ENSSGRG00000014939) zgc:162962 (ENSSGRG00000014938) ENSSGRG00000014937 Goldfish DUPLICATION Goldfish MODERN SPECIES 2840 ENSCARG00000054230 #22 Goldfish MODERN SPECIES 34 igsf11 (ENSCARG00000051058) ENSCARG00000051071 IWS1 (ENSCARG00000051091) ilkap (ENSCARG00000051157) DGKD (ENSCARG00000051221) ENSCARG00000043876 atg16l1 (ENSCARG00000043993) cldn15lb (ENSCARG00000044476) ENSCARG00000044504 ENSCARG00000044573 fgf12b (ENSCARG00000044590) ENSCARG00000044623 ENSCARG00000044631 ENSCARG00000044678 fzd4 (ENSCARG00000044692) ENSCARG00000044719 #22 PDGFD (ENSCARG00000044944) #23 ENSCARG00000044962 ARAP1 (ENSCARG00000045062) PSMD2 (ENSCARG00000045953) ENSCARG00000049283 ENSCARG00000049300 alp3 (ENSCARG00000049379) fam131ab (ENSCARG00000050263) CLCN2 (ENSCARG00000050344) cep57 (ENSCARG00000051618) PDE2A (ENSCARG00000051739) stard10 (ENSCARG00000052433) ENSCARG00000052473 gap43 (ENSCARG00000052506) ENSCARG00000052525 Cyprininae ANCESTRAL SPECIES ENSGT00940000154620.c.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000154620.c.b #22 Golden-line barbel MODERN SPECIES 1107 ENSSGRG00000016077 #22 ENSSGRG00000016076 #22 PDGFD (ENSSGRG00000016074) #23 gria4a (ENSSGRG00000014952) ##33 MSANTD4 (ENSSGRG00000014943) #34 aasdhppt (ENSSGRG00000014941) #36 GUCY1A2 (ENSSGRG00000014940) CWF19L2 (ENSSGRG00000014939) zgc:162962 (ENSSGRG00000014938) ENSSGRG00000014937 Goldfish MODERN SPECIES 2612 ENSCARG00000052085 #22 Cyprininae ANCESTRAL SPECIES 591 ENSGT00940000159041.f ENSGT00940000155435.B.a.b ENSGT00390000013063.u.g ENSGT01050000244976.b.b.b.b.b.b.b ENSGT00940000155929.a.a.a.b ENSGT00940000153936.a.h.b ENSGT00940000157650 ENSGT00390000013063.u.h ENSGT01050000244976.b.b.b.b.b.b.a ENSGT00940000155929.a.a.b ENSGT01090000260076.a.db ENSGT00530000067879.e.b ENSGT00940000157141.c ENSGT00940000154620.c.a #22 ENSGT00940000154620.d #22 ENSGT00940000159575.b #23 ENSGT00940000155677.a.i.a ##33 Cyprininae_a ANCESTRAL SPECIES 38 ENSGT00940000159041.f ENSGT00940000155435.B.a.b ENSGT00950000182887.C.b.a.m.b.c ENSGT00940000153936.a.g ENSGT00390000013063.u.g ENSGT01050000244976.b.b.b.b.b.b.b ENSGT00940000155929.a.a.a.b ENSGT01090000260076.a.db.a ENSGT00530000067879.e.a ENSGT00940000157141.d ENSGT00940000154620.d #22 ENSGT00940000159575.b #23 ENSGT00940000155677.a.i.b ##33 ENSGT00940000159575.a #23 ENSGT00940000155677.a.j ##33 ENSGT00440000039469.p #34 ENSGT00390000004663.m #36 ENSGT00940000157765.g ENSGT00940000155627.m ENSGT00940000154308.B.c.b.a.a.a.a.a ENSGT01100000263476.B.b.a.b.a.a ENSGT01030000234598.b.a.b.a ENSGT00940000155336.g.a.a ENSGT01030000234595.A.a.jb.a.b.a ENSGT00940000155787.y ENSGT00940000157301.b.f.b.b Golden-line barbel MODERN SPECIES 291 lrfn1 (ENSSGRG00000000716) igsf11 (ENSSGRG00000000712) IWS1 (ENSSGRG00000000711) zgc:162872 (ENSSGRG00000000704) ENSSGRG00000000702 DGKD (ENSSGRG00000000289) ENSSGRG00000042149 sagb (ENSSGRG00000042148) atg16l1 (ENSSGRG00000042117) PARL (ENSSGRG00000042054) ENSSGRG00000042052 fgf12b (ENSSGRG00000042050) ENSSGRG00000042047 ENSSGRG00000042044 fzd4 (ENSSGRG00000042042) ENSSGRG00000042040 #22 Common carp reference MODERN SPECIES 39 lrfn1 (ENSCCRG00000026527) ENSCCRG00000063858 ENSCCRG00000061079 ENSCCRG00000045493 DGKD (ENSCCRG00000045937) ENSCCRG00000063943 sagb (ENSCCRG00000045529) atg16l1 (ENSCCRG00000056064) cldn15lb (ENSCCRG00000023337) ENSCCRG00000010967 ENSCCRG00000080277 fgf12b (ENSCCRG00000078575) ENSCCRG00000067882 ENSCCRG00000027277 ENSCCRG00000066724 ENSCCRG00000078489 #22 ENSCCRG00000079600 #23 gria4a (ENSCCRG00000064177) ##33 MSANTD4 (ENSCCRG00000073480) #34 aasdhppt (ENSCCRG00000042079) #36 GUCY1A2 (ENSCCRG00000069969) zgc:162962 (ENSCCRG00000008550) ENSCCRG00000077210 ENSCCRG00000043285 ENSCCRG00000002907 lamtor1 (ENSCCRG00000032630) lrrc51 (ENSCCRG00000078303) wu:fb44b02 (ENSCCRG00000026879) ENSCCRG00000024227 naalad2 (ENSCCRG00000024222) ENSCCRG00000024197 Characiphysae DUPLICATION Characiphysae ANCESTRAL SPECIES ENSGT00940000154620.e #22 Characiphysae_b ANCESTRAL SPECIES 151 ENSGT00940000165072 ENSGT00940000156389.b ENSGT00940000157403 ENSGT00940000159041 ENSGT00940000155435.B.a ENSGT00950000182887.C.b.a.m.b ENSGT00940000153936.a ENSGT00940000157650 ENSGT00390000013063.u ENSGT01050000244976.b.b.b.b.b.b ENSGT00940000155929.a.a ENSGT01090000260076.a ENSGT00530000067879 ENSGT00940000157141 ENSGT00940000154620.e #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00510000047925 ENSGT00390000016789 ENSGT00940000166338 ENSGT01100000263476.B.b.a.b ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a.b Characoidei ANCESTRAL SPECIES ENSGT00940000154620.e #22 Red-bellied piranha MODERN SPECIES 1335 ENSPNAG00000000142 #22 PDGFD (ENSPNAG00000007371) #23 Characiphysae DUPLICATION Characiphysae ANCESTRAL SPECIES 144 ENSGT00940000165072 ENSGT00940000156389.b ENSGT00940000157403 ENSGT00940000159041 ENSGT00940000155435.B.a ENSGT00950000182887.C.b.a.m.b ENSGT00940000153936.a ENSGT00940000157650 ENSGT00390000013063.u ENSGT01050000244976.b.b.b.b.b.b ENSGT00940000155929.a.a ENSGT01090000260076.a ENSGT00530000067879 ENSGT00940000157141 ENSGT00940000154620.f.b #22 ENSGT00940000154620.f.a #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00510000047925 ENSGT00390000016789 ENSGT00950000183078.b.a.a ENSGT00940000166338 ENSGT01100000263476.B.b.a.b ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a Characiphysae_b ANCESTRAL SPECIES ENSGT00940000154620.f.a #22 Characoidei ANCESTRAL SPECIES 132 ENSGT00510000047886.b.gb ENSGT00940000165072 ENSGT00940000156389.b ENSGT00940000157403 ENSGT00940000159041 ENSGT00940000155435.B.a ENSGT00950000182887.C.b.a.m.b ENSGT00940000153936.a ENSGT00940000157650 ENSGT00390000013063.u ENSGT01050000244976.b.b.b.b.b.b ENSGT00940000155929.a.a ENSGT01090000260076.a ENSGT00530000067879 ENSGT00940000157141 ENSGT00940000154620.f.a #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00510000047925 ENSGT00390000016789 ENSGT00940000166338 ENSGT01100000263476.B.b.a.b ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a.b Red-bellied piranha MODERN SPECIES 1121 DYNC2H1 (ENSPNAG00000027157) #22 Mexicana tetra MODERN SPECIES ENSAMXG00000032307 ENSAMXG00000040030 ENSAMXG00000039890 ARAP1 (ENSAMXG00000011633) stard10 (ENSAMXG00000037823) CLPB (ENSAMXG00000043101) phox2a (ENSAMXG00000043030) inppl1a (ENSAMXG00000011596) PARL (ENSAMXG00000011530) ENSAMXG00000011529 fgf12b (ENSAMXG00000011528) ENSAMXG00000011502 ENSAMXG00000032242 fzd4 (ENSAMXG00000003697) ENSAMXG00000042420 DYNC2H1 (ENSAMXG00000003700) #22 PDGFD (ENSAMXG00000003704) #23 gria4a (ENSAMXG00000003712) ##33 ENSAMXG00000041257 MSANTD4 (ENSAMXG00000003747) #34 aasdhppt (ENSAMXG00000031742) #36 GUCY1A2 (ENSAMXG00000003757) cwf19l2 (ENSAMXG00000003771) lrrc51 (ENSAMXG00000032266) lamtor1 (ENSAMXG00000036428) ENSAMXG00000042998 ENSAMXG00000003819 chordc1a (ENSAMXG00000003831) naalad2 (ENSAMXG00000003867) ENSAMXG00000032603 ENSAMXG00000031792 Electric eel MODERN SPECIES 180 DYNC2H1 (ENSEEEG00000001772) #22 PDGFD (ENSEEEG00000001770) #23 gria4a (ENSEEEG00000001738) ##33 MSANTD4 (ENSEEEG00000001713) #34 aasdhppt (ENSEEEG00000001711) #36 GUCY1A2 (ENSEEEG00000001707) cwf19l2 (ENSEEEG00000001703) lrrc51 (ENSEEEG00000001702) lamtor1 (ENSEEEG00000001701) ENSEEEG00000001689 chordc1a (ENSEEEG00000001681) naalad2 (ENSEEEG00000001437) NOX4 (ENSEEEG00000001384) tyr (ENSEEEG00000001329) grm5b (ENSEEEG00000001327) ctsc (ENSEEEG00000001326) Characiphysae ANCESTRAL SPECIES 144 ENSGT00940000165072 ENSGT00940000156389.b ENSGT00940000157403 ENSGT00940000159041 ENSGT00940000155435.B.a ENSGT00950000182887.C.b.a.m.b ENSGT00940000153936.a ENSGT00940000157650 ENSGT00390000013063.u ENSGT01050000244976.b.b.b.b.b.b ENSGT00940000155929.a.a ENSGT01090000260076.a ENSGT00530000067879 ENSGT00940000157141 ENSGT00940000154620.f.b #22 ENSGT00940000154620.f.a #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00510000047925 ENSGT00390000016789 ENSGT00950000183078.b.a.a ENSGT00940000166338 ENSGT01100000263476.B.b.a.b ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 Channel catfish DUPLICATION Channel catfish DUPLICATION Channel catfish MODERN SPECIES 8 ENSIPUG00000001696 ENSIPUG00000001711 ENSIPUG00000001730 zgc:162872 (ENSIPUG00000001746) ilkap (ENSIPUG00000001784) DGKD (ENSIPUG00000001794) ENSIPUG00000001823 sagb (ENSIPUG00000001834) atg16l1 (ENSIPUG00000001854) cldn15lb (ENSIPUG00000001907) parl (ENSIPUG00000001955) fgf12b (ENSIPUG00000001982) ENSIPUG00000002017 ENSIPUG00000002041 Fzd4 (ENSIPUG00000002059) ENSIPUG00000002069 #22 ENSIPUG00000002106 #22 ENSIPUG00000002128 #22 PDGFD (ENSIPUG00000002140) #23 gria4a (ENSIPUG00000002155) ##33 aasdhppt (ENSIPUG00000002178) #36 GUCY1A2 (ENSIPUG00000002197) cwf19l2 (ENSIPUG00000002246) LRRC51 (ENSIPUG00000002281) lamtor1 (ENSIPUG00000002291) numa1 (ENSIPUG00000002315) chordc1a (ENSIPUG00000002382) Folh1 (ENSIPUG00000002407) ENSIPUG00000002504 tyr (ENSIPUG00000002526) grm5b (ENSIPUG00000002532) Channel catfish MODERN SPECIES 8 ENSIPUG00000001711 ENSIPUG00000001730 zgc:162872 (ENSIPUG00000001746) ilkap (ENSIPUG00000001784) DGKD (ENSIPUG00000001794) ENSIPUG00000001823 sagb (ENSIPUG00000001834) atg16l1 (ENSIPUG00000001854) cldn15lb (ENSIPUG00000001907) parl (ENSIPUG00000001955) fgf12b (ENSIPUG00000001982) ENSIPUG00000002017 ENSIPUG00000002041 Fzd4 (ENSIPUG00000002059) ENSIPUG00000002069 #22 ENSIPUG00000002106 #22 ENSIPUG00000002128 #22 PDGFD (ENSIPUG00000002140) #23 gria4a (ENSIPUG00000002155) ##33 aasdhppt (ENSIPUG00000002178) #36 GUCY1A2 (ENSIPUG00000002197) cwf19l2 (ENSIPUG00000002246) LRRC51 (ENSIPUG00000002281) lamtor1 (ENSIPUG00000002291) numa1 (ENSIPUG00000002315) chordc1a (ENSIPUG00000002382) Folh1 (ENSIPUG00000002407) ENSIPUG00000002504 tyr (ENSIPUG00000002526) grm5b (ENSIPUG00000002532) CTSC (ENSIPUG00000002552) Channel catfish MODERN SPECIES 8 ENSIPUG00000001730 zgc:162872 (ENSIPUG00000001746) ilkap (ENSIPUG00000001784) DGKD (ENSIPUG00000001794) ENSIPUG00000001823 sagb (ENSIPUG00000001834) atg16l1 (ENSIPUG00000001854) cldn15lb (ENSIPUG00000001907) parl (ENSIPUG00000001955) fgf12b (ENSIPUG00000001982) ENSIPUG00000002017 ENSIPUG00000002041 Fzd4 (ENSIPUG00000002059) ENSIPUG00000002069 #22 ENSIPUG00000002106 #22 ENSIPUG00000002128 #22 PDGFD (ENSIPUG00000002140) #23 gria4a (ENSIPUG00000002155) ##33 aasdhppt (ENSIPUG00000002178) #36 GUCY1A2 (ENSIPUG00000002197) cwf19l2 (ENSIPUG00000002246) LRRC51 (ENSIPUG00000002281) lamtor1 (ENSIPUG00000002291) numa1 (ENSIPUG00000002315) chordc1a (ENSIPUG00000002382) Folh1 (ENSIPUG00000002407) ENSIPUG00000002504 tyr (ENSIPUG00000002526) grm5b (ENSIPUG00000002532) CTSC (ENSIPUG00000002552) RAB38 (ENSIPUG00000002584) Characiphysae_b ANCESTRAL SPECIES ENSGT00940000154620.f.b #22 Electric eel MODERN SPECIES 1351 ENSEEEG00000018049 #22 Euteleosteomorpha ANCESTRAL SPECIES 158 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925 ENSGT00950000183078.b.a.a ENSGT01100000263529.a.b ENSGT00940000166338 ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 Protacanthopterygii ANCESTRAL SPECIES 15 ENSGT00390000016789 ENSGT00510000047925 ENSGT00950000183078.b.a.a ENSGT01100000263529.a.b ENSGT00940000166338 ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000165728.d ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000161369.B.b.a.b.h ENSGT00940000161369.A.c ENSGT00940000161454 ENSGT00950000182847.b.b.a.b.h ENSGT00940000161369.B.b.a.b.g ENSGT00950000182847.b.a ENSGT00940000163767.a.b Northern pike MODERN SPECIES lamtor1 (ENSELUG00000031764) lrrc51 (ENSELUG00000011176) wu:fb44b02 (ENSELUG00000011268) ENSELUG00000011300 chordc1a (ENSELUG00000011345) naalad2 (ENSELUG00000011396) ENSELUG00000011453 tyr (ENSELUG00000011493) ENSELUG00000031147 grm5b (ENSELUG00000000414) ctsc (ENSELUG00000011548) RAB38 (ENSELUG00000011561) fzd4 (ENSELUG00000011578) ENSELUG00000011616 ENSELUG00000011635 DYNC2H1 (ENSELUG00000000419) #22 si:ch211-129c21.1 (ENSELUG00000011868) PDGFD (ENSELUG00000011971) #23 gria4a (ENSELUG00000012003) ##33 MSANTD4 (ENSELUG00000012029) #34 aasdhppt (ENSELUG00000012045) #36 GUCY1A2 (ENSELUG00000012079) ENSELUG00000012091 cwf19l2 (ENSELUG00000000442) ALKBH8 (ENSELUG00000012168) ENSELUG00000034440 ENSELUG00000033849 ENSELUG00000025048 ENSELUG00000030699 ENSELUG00000031133 ENSELUG00000029442 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00940000154620.g #22 Huchen MODERN SPECIES 5732 ENSHHUG00000033253 #22 ENSHHUG00000033266 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 752 ENSGT00940000157141.j ENSGT00530000067879.a ENSGT00940000154620.h.a #22 ENSGT00940000154620.h.b.a #22 ENSGT00940000165728.d ENSGT00940000159575.c #23 ENSGT00940000155677.a.g.b.a ##33 ENSGT00440000039469.r #34 ENSGT00390000004663 #36 ENSGT00940000157765.k Salmoninae_a ANCESTRAL SPECIES 56 ENSGT00950000183144.A ENSGT00390000000938.mb ENSGT00940000161220 ENSGT00940000156432.b.a ENSGT00390000016789.b ENSGT00510000047925 ENSGT00940000166338 ENSGT00940000154174.fb.b ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a.m.a ENSGT01030000234595.A.a.jb.a.n ENSGT00940000155787.w ENSGT00940000157301.b.f.c ENSGT00940000157141.j ENSGT00530000067879.a ENSGT00940000154620.h.a #22 ENSGT00940000165728.d ENSGT00940000159575.c #23 ENSGT00940000155677.a.g.b.a ##33 ENSGT00440000039469.r #34 ENSGT00390000004663 #36 ENSGT00940000157765.k ENSGT00940000158563 ENSGT01100000263709 ENSGT00940000161369.B.b.a.b.h.a ENSGT00940000161369.B.b.a.b.g ENSGT00950000182847.b.a.i ENSGT00950000182847.b.a.j.a ENSGT00940000163767.a.b ENSGT00940000163767.a.a.d ENSGT00940000163767.a.a.c.a Oncorhynchus ANCESTRAL SPECIES 57 ENSGT00390000000938.mb ENSGT00940000161220 ENSGT00940000156432.b.a ENSGT00390000016789.b ENSGT00510000047925 ENSGT00940000166338 ENSGT00940000154174.fb.b ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a.m.a ENSGT01030000234595.A.a.jb.a.n ENSGT00940000155787.w ENSGT00940000157301.b.f.d.c.b ENSGT00940000157301.b.f.c ENSGT00940000157141.j ENSGT00530000067879.a ENSGT00940000154620.h.a #22 ENSGT00940000165728.d ENSGT00940000159575.c #23 ENSGT00940000155677.a.g.b.a ##33 ENSGT00440000039469.r #34 ENSGT00390000004663 #36 ENSGT00940000157765.k ENSGT00940000158563 ENSGT01100000263709 ENSGT00940000161369.B.b.a.b.h.a ENSGT00940000161369.B.b.a.b.g.a ENSGT00940000161369.B.b.a.b.g.b ENSGT00950000182847.b.a.i ENSGT00940000163767.a.b ENSGT00940000163767.a.a.d ENSGT00940000163767.a.a.c.a Rainbow trout MODERN SPECIES 16 lamtor1 (ENSOMYG00000040517) LRRC51 (ENSOMYG00000040508) ENSOMYG00000051509 chordc1a (ENSOMYG00000040453) ENSOMYG00000040815 ENSOMYG00000048565 tyr (ENSOMYG00000040409) GRM5 (ENSOMYG00000040870) ENSOMYG00000069612 ctsc (ENSOMYG00000040372) RAB38 (ENSOMYG00000040810) ENSOMYG00000055260 ENSOMYG00000040804 cd86 (ENSOMYG00000040790) ENSOMYG00000068130 ENSOMYG00000040748 #22 ENSOMYG00000040709 ENSOMYG00000076746 #23 ENSOMYG00000053265 gria4a (ENSOMYG00000040247) ##33 MSANTD4 (ENSOMYG00000040242) #34 aasdhppt (ENSOMYG00000040238) #36 ENSOMYG00000066063 GUCY1A2 (ENSOMYG00000040230) ENSOMYG00000034733 ALKBH8 (ENSOMYG00000040193) ENSOMYG00000040190 ENSOMYG00000040180 ENSOMYG00000040172 ENSOMYG00000040162 or40a1 (ENSOMYG00000040154) Oncorhynchus_a ANCESTRAL SPECIES 116 ENSGT00940000157301.b.f.c ENSGT00940000157141.j ENSGT00530000067879.a ENSGT00940000154620.h.a #22 ENSGT00940000165728.d ENSGT00940000159575.c #23 ENSGT00940000155677.a.g.b.a ##33 ENSGT00440000039469.r #34 ENSGT00390000004663 #36 ENSGT00940000157765.k ENSGT00940000158563 ENSGT00940000161369.B.b.a.b.h.a ENSGT00940000161369.B.b.a.b.g.a ENSGT00940000161369.B.b.a.b.g.b ENSGT00950000182847.b.a.i ENSGT00940000163767.a.b ENSGT00940000163767.a.a.d ENSGT00940000163767.a.a.c.a ENSGT00940000162761.b.a.e Coho salmon MODERN SPECIES 9 lrrc51 (ENSOKIG00005009789) lamtor1 (ENSOKIG00005009819) ENSOKIG00005009835 tomt (ENSOKIG00005009855) anapc15 (ENSOKIG00005009955) folr (ENSOKIG00005009968) inppl1a (ENSOKIG00005010021) phox2a (ENSOKIG00005010203) CLPB (ENSOKIG00005010215) ENSOKIG00005010251 RAB38 (ENSOKIG00005010256) CTSC (ENSOKIG00005010266) RAB38 (ENSOKIG00005010282) fzd4 (ENSOKIG00005010285) ENSOKIG00005010289 DYNC2H1 (ENSOKIG00005010324) #22 ENSOKIG00005010353 PDGFD (ENSOKIG00005010386) #23 gria4a (ENSOKIG00005010591) ##33 MSANTD4 (ENSOKIG00005014715) #34 aasdhppt (ENSOKIG00005014720) #36 GUCY1A2 (ENSOKIG00005014744) ALKBH8 (ENSOKIG00005014791) ENSOKIG00005014838 ENSOKIG00005014844 ENSOKIG00005014848 or40a1 (ENSOKIG00005014854) or15.37 (ENSOKIG00005014861) or71at1 (ENSOKIG00005014869) or71aq1 (ENSOKIG00005014875) ENSOKIG00005014885 Salmo ANCESTRAL SPECIES 18 ENSGT00950000183144.A ENSGT00390000000938.mb ENSGT00940000161220 ENSGT00940000156432.b.a ENSGT00390000016789.b ENSGT00510000047925.d ENSGT00940000166338 ENSGT00940000154174.fb.b.a ENSGT01060000252820 ENSGT00940000155787.w ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a.m.a ENSGT00940000157301.b.f.c ENSGT00940000157141.j ENSGT00530000067879.a ENSGT00940000154620.h.a #22 ENSGT00940000154620.h.b.a #22 ENSGT00940000165728.d ENSGT00940000159575.c #23 ENSGT00940000155677.a.g.a.b ##33 ENSGT00440000039469.r #34 ENSGT00390000004663 #36 ENSGT00940000157765.k ENSGT00990000213217 ENSGT00940000158563 ENSGT01100000263709 ENSGT00940000161369.B.b.a.b.h.a ENSGT00940000161369.B.b.a.b.g ENSGT00950000182847.b.a.j.a ENSGT00940000163767.a.b ENSGT00940000163767.a.a.d River trout MODERN SPECIES 4 anapc15 (ENSSTUG00000018880) tomt (ENSSTUG00000018879) ENSSTUG00000018871 lamtor1 (ENSSTUG00000018867) lrrc51 (ENSSTUG00000018861) ENSSTUG00000018796 chordc1a (ENSSTUG00000018766) ENSSTUG00000018740 ctsc (ENSSTUG00000018723) tyr (ENSSTUG00000013133) ENSSTUG00000013086 ctsc (ENSSTUG00000013066) RAB38 (ENSSTUG00000013046) fzd4 (ENSSTUG00000013041) ENSSTUG00000013017 DYNC2H1 (ENSSTUG00000012636) #22 gria4a (ENSSTUG00000011356) ##33 MSANTD4 (ENSSTUG00000011313) #34 aasdhppt (ENSSTUG00000011298) #36 GUCY1A2 (ENSSTUG00000011248) ENSSTUG00000011240 ALKBH8 (ENSSTUG00000011195) ENSSTUG00000011192 ENSSTUG00000011188 salmOR300-3 (ENSSTUG00000011184) ENSSTUG00000011178 or40a1 (ENSSTUG00000011172) or71al2 (ENSSTUG00000011169) or71at1 (ENSSTUG00000011162) ENSSTUG00000011158 ENSSTUG00000011150 Atlantic salmon MODERN SPECIES 71 ENSSSAG00000062228 #22 Huchen MODERN SPECIES 3025 ENSHHUG00000004173 ENSHHUG00000004182 #22 ENSHHUG00000004211 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 752 ENSGT00940000157141.j ENSGT00530000067879.a ENSGT00940000154620.h.a #22 ENSGT00940000154620.h.b.a #22 ENSGT00940000165728.d ENSGT00940000159575.c #23 ENSGT00940000155677.a.g.b.a ##33 ENSGT00440000039469.r #34 ENSGT00390000004663 #36 ENSGT00940000157765.k Huchen DUPLICATION Huchen MODERN SPECIES 5620 ENSHHUG00000025484 #22 ENSHHUG00000025473 #22 Huchen MODERN SPECIES 5620 ENSHHUG00000025484 #22 ENSHHUG00000025473 #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000154620.h.b.a #22 Salmo ANCESTRAL SPECIES 18 ENSGT00390000000938.mb ENSGT00940000161220 ENSGT00940000156432.b.a ENSGT00390000016789.b ENSGT00510000047925.d ENSGT00940000166338 ENSGT00940000154174.fb.b.a ENSGT01060000252820 ENSGT00940000155787.w ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a.m.a ENSGT00940000157301.b.f.c ENSGT00940000157141.j ENSGT00530000067879.a ENSGT00940000154620.h.a #22 ENSGT00940000154620.h.b.a #22 ENSGT00940000165728.d ENSGT00940000159575.c #23 ENSGT00940000155677.a.g.a.b ##33 ENSGT00440000039469.r #34 ENSGT00390000004663 #36 ENSGT00940000157765.k ENSGT00990000213217 ENSGT00940000158563 ENSGT01100000263709 ENSGT00940000161369.B.b.a.b.h.a ENSGT00940000161369.B.b.a.b.g ENSGT00950000182847.b.a.j.a ENSGT00940000163767.a.b ENSGT00940000163767.a.a.d ENSGT00940000163767.a.a.c.a Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 28 LRRC51 (ENSSSAG00000064820) ENSSSAG00000064831 chordc1a (ENSSSAG00000064884) ENSSSAG00000121750 ENSSSAG00000068420 tyr (ENSSSAG00000064946) GRM5 (ENSSSAG00000065084) ENSSSAG00000117978 ctsc (ENSSSAG00000064915) RAB38 (ENSSSAG00000116874) ENSSSAG00000096044 ENSSSAG00000091069 ENSSSAG00000056420 ENSSSAG00000102429 #22 ENSSSAG00000115364 ENSSSAG00000064354 #22 ENSSSAG00000056276 ENSSSAG00000088618 #23 ENSSSAG00000059953 gria4a (ENSSSAG00000058403) ##33 ENSSSAG00000099354 msantd4 (ENSSSAG00000046368) #34 aasdhppt (ENSSSAG00000046350) #36 GUCY1A2 (ENSSSAG00000046300) ENSSSAG00000046283 ALKBH8 (ENSSSAG00000046167) ENSSSAG00000046159 ENSSSAG00000046152 salmOR300-2 (ENSSSAG00000111379) or40a1 (ENSSSAG00000046137) MOR119-1 (ENSSSAG00000046134) Atlantic salmon MODERN SPECIES 28 ENSSSAG00000087232 lamtor1 (ENSSSAG00000108034) LRRC51 (ENSSSAG00000064820) ENSSSAG00000064831 chordc1a (ENSSSAG00000064884) ENSSSAG00000121750 ENSSSAG00000068420 tyr (ENSSSAG00000064946) GRM5 (ENSSSAG00000065084) ENSSSAG00000117978 ctsc (ENSSSAG00000064915) RAB38 (ENSSSAG00000116874) ENSSSAG00000096044 ENSSSAG00000091069 ENSSSAG00000056420 ENSSSAG00000102429 #22 ENSSSAG00000115364 ENSSSAG00000064354 #22 ENSSSAG00000056276 ENSSSAG00000088618 #23 ENSSSAG00000059953 gria4a (ENSSSAG00000058403) ##33 ENSSSAG00000099354 msantd4 (ENSSSAG00000046368) #34 aasdhppt (ENSSSAG00000046350) #36 GUCY1A2 (ENSSSAG00000046300) ENSSSAG00000046283 ALKBH8 (ENSSSAG00000046167) ENSSSAG00000046159 ENSSSAG00000046152 salmOR300-2 (ENSSSAG00000111379) River trout MODERN SPECIES 4 tyr (ENSSTUG00000013133) ctsc (ENSSTUG00000018723) ENSSTUG00000018740 chordc1a (ENSSTUG00000018766) ENSSTUG00000018796 lrrc51 (ENSSTUG00000018861) lamtor1 (ENSSTUG00000018867) ENSSTUG00000018871 tomt (ENSSTUG00000018879) anapc15 (ENSSTUG00000018880) folr (ENSSTUG00000018891) inppl1a (ENSSTUG00000018914) phox2a (ENSSTUG00000018975) CLPB (ENSSTUG00000019064) stard10 (ENSSTUG00000019966) ENSSTUG00000019974 #22 ENSSTUG00000020011 PDGFD (ENSSTUG00000020120) #23 PDE2A (ENSSTUG00000020401) ENSSTUG00000024110 ENSSTUG00000024197 P2RY2 (ENSSTUG00000024219) relt (ENSSTUG00000024230) ENSSTUG00000024238 P2RY6 (ENSSTUG00000024244) ENSSTUG00000024255 glod4 (ENSSTUG00000024278) ENSSTUG00000024304 ENSSTUG00000024848 ENSSTUG00000032380 ENSSTUG00000032402 Salmoninae ANCESTRAL SPECIES ENSGT00940000154620.h.b.b #22 Huchen DUPLICATION Huchen MODERN SPECIES 1063 ENSHHUG00000001446 STON1 (ENSHHUG00000001450) ppp1r21 (ENSHHUG00000001466) FOXN2 (ENSHHUG00000001483) ENSHHUG00000001491 msh6 (ENSHHUG00000001540) KCNK12 (ENSHHUG00000001602) ENSHHUG00000001620 #22 Huchen MODERN SPECIES 7025 ENSHHUG00000015838 #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000154620.h.b.b #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000154620.h.b.b #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000154620.h.b.b #22 Chinook salmon MODERN SPECIES 606 ENSOTSG00005040661 #22 Acanthomorphata ANCESTRAL SPECIES 69 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925 ENSGT00950000183078.b.a.a ENSGT01100000263529.a.b ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Cod MODERN SPECIES 7 serpinh1b (ENSGMOG00000001309) gucy2f (ENSGMOG00000001321) tsku (ENSGMOG00000026989) ENSGMOG00000018386 ENSGMOG00000028410 ENSGMOG00000004213 naalad2 (ENSGMOG00000004181) ENSGMOG00000004395 tyr (ENSGMOG00000004414) grm5b (ENSGMOG00000004428) ctsc (ENSGMOG00000004493) RAB38 (ENSGMOG00000004510) ENSGMOG00000037244 ENSGMOG00000025755 ENSGMOG00000033445 ENSGMOG00000015971 #22 ENSGMOG00000036426 #23 gria4a (ENSGMOG00000002531) ##33 MSANTD4 (ENSGMOG00000023082) #34 ENSGMOG00000032606 aasdhppt (ENSGMOG00000029202) #36 GUCY1A2 (ENSGMOG00000002617) cwf19l2 (ENSGMOG00000002651) ALKBH8 (ENSGMOG00000002720) ENSGMOG00000029679 ENSGMOG00000028220 ENSGMOG00000023851 ENSGMOG00000022872 ENSGMOG00000015315 ENSGMOG00000028142 bco2b (ENSGMOG00000014958) Euacanthomorphacea ANCESTRAL SPECIES 8 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925 ENSGT00950000183078.b.a.a ENSGT01100000263529.a.b ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Pinecone sodierfish DUPLICATION Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 4 ENSMMDG00005021589 ENSMMDG00005021585 ENSMMDG00005021584 chordc1a (ENSMMDG00005021517) naalad2 (ENSMMDG00005021508) ENSMMDG00005021294 tyr (ENSMMDG00005021286) grm5b (ENSMMDG00005021264) ctsc (ENSMMDG00005021260) RAB38 (ENSMMDG00005021257) fzd4 (ENSMMDG00005021185) ENSMMDG00005021177 ENSMMDG00005021170 #22 ENSMMDG00005021167 ENSMMDG00005021162 #22 ENSMMDG00005021160 #22 PDGFD (ENSMMDG00005021156) #23 gria4a (ENSMMDG00005020942) ##33 MSANTD4 (ENSMMDG00005020916) #34 aasdhppt (ENSMMDG00005020910) #36 GUCY1A2 (ENSMMDG00005020906) cwf19l2 (ENSMMDG00005020895) ALKBH8 (ENSMMDG00005020889) KBTBD3 (ENSMMDG00005020884) #35 ENSMMDG00005020879 P2RY6 (ENSMMDG00005020859) ARHGEF17 (ENSMMDG00005020851) relt (ENSMMDG00005020846) P2RY2 (ENSMMDG00005020842) FCHSD2 (ENSMMDG00005020836) ENSMMDG00005020829 Pinecone sodierfish MODERN SPECIES 4 zgc:114130 (ENSMMDG00005021597) trappc6bl (ENSMMDG00005021595) bloc1s3 (ENSMMDG00005021593) ENSMMDG00005021589 ENSMMDG00005021585 ENSMMDG00005021584 chordc1a (ENSMMDG00005021517) naalad2 (ENSMMDG00005021508) ENSMMDG00005021294 tyr (ENSMMDG00005021286) grm5b (ENSMMDG00005021264) ctsc (ENSMMDG00005021260) RAB38 (ENSMMDG00005021257) fzd4 (ENSMMDG00005021185) ENSMMDG00005021177 ENSMMDG00005021170 #22 ENSMMDG00005021167 ENSMMDG00005021162 #22 ENSMMDG00005021160 #22 PDGFD (ENSMMDG00005021156) #23 gria4a (ENSMMDG00005020942) ##33 MSANTD4 (ENSMMDG00005020916) #34 aasdhppt (ENSMMDG00005020910) #36 GUCY1A2 (ENSMMDG00005020906) cwf19l2 (ENSMMDG00005020895) ALKBH8 (ENSMMDG00005020889) KBTBD3 (ENSMMDG00005020884) #35 ENSMMDG00005020879 P2RY6 (ENSMMDG00005020859) ARHGEF17 (ENSMMDG00005020851) relt (ENSMMDG00005020846) Pinecone sodierfish MODERN SPECIES 4 bloc1s3 (ENSMMDG00005021593) ENSMMDG00005021589 ENSMMDG00005021585 ENSMMDG00005021584 chordc1a (ENSMMDG00005021517) naalad2 (ENSMMDG00005021508) ENSMMDG00005021294 tyr (ENSMMDG00005021286) grm5b (ENSMMDG00005021264) ctsc (ENSMMDG00005021260) RAB38 (ENSMMDG00005021257) fzd4 (ENSMMDG00005021185) ENSMMDG00005021177 ENSMMDG00005021170 #22 ENSMMDG00005021167 ENSMMDG00005021162 #22 ENSMMDG00005021160 #22 PDGFD (ENSMMDG00005021156) #23 gria4a (ENSMMDG00005020942) ##33 MSANTD4 (ENSMMDG00005020916) #34 aasdhppt (ENSMMDG00005020910) #36 GUCY1A2 (ENSMMDG00005020906) cwf19l2 (ENSMMDG00005020895) ALKBH8 (ENSMMDG00005020889) KBTBD3 (ENSMMDG00005020884) #35 ENSMMDG00005020879 P2RY6 (ENSMMDG00005020859) ARHGEF17 (ENSMMDG00005020851) relt (ENSMMDG00005020846) P2RY2 (ENSMMDG00005020842) FCHSD2 (ENSMMDG00005020836) Percomorphaceae ANCESTRAL SPECIES 8 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925 ENSGT00950000183078.b.a.a ENSGT01100000263529.a.b ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Tiger tail seahorse MODERN SPECIES 345 inppl1a (ENSHCOG00000014440) folr (ENSHCOG00000014475) anapc15 (ENSHCOG00000014533) tomt (ENSHCOG00000014541) ENSHCOG00000014546 ENSHCOG00000014560 lamtor1 (ENSHCOG00000014577) naalad2 (ENSHCOG00000014743) NOX4 (ENSHCOG00000014787) tyr (ENSHCOG00000014801) grm5b (ENSHCOG00000014839) ctsc (ENSHCOG00000014852) RAB38 (ENSHCOG00000014973) fzd4 (ENSHCOG00000014990) ENSHCOG00000015009 DYNC2H1 (ENSHCOG00000015174) #22 PDGFD (ENSHCOG00000015191) #23 gria4a (ENSHCOG00000015215) ##33 ENSHCOG00000015234 ##33 aasdhppt (ENSHCOG00000015250) #36 GUCY1A2 (ENSHCOG00000015363) cwf19l2 (ENSHCOG00000015378) ENSHCOG00000015387 ALKBH8 (ENSHCOG00000015443) KBTBD3 (ENSHCOG00000015465) #35 fam168a (ENSHCOG00000015473) P2RY6 (ENSHCOG00000015482) ARHGEF17 (ENSHCOG00000015568) relt (ENSHCOG00000000433) FCHSD2 (ENSHCOG00000015616) ENSHCOG00000015647 Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT01070000254066 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00390000016789 ENSGT00510000047925.f ENSGT00950000183078.b.a.a ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT01070000254066 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d Anabantaria ANCESTRAL SPECIES 9 ENSGT00390000016789 ENSGT00510000047925.f ENSGT00950000183078.b.a.a ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Anabantoidei ANCESTRAL SPECIES 14 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00950000183078.b.a.a ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Climbing perch MODERN SPECIES 4 lrrc51 (ENSATEG00000006642) wu:fb44b02 (ENSATEG00000006669) ENSATEG00000006698 ENSATEG00000006713 ENSATEG00000006745 ENSATEG00000006790 ENSATEG00000006796 naalad2 (ENSATEG00000006835) ENSATEG00000006930 tyr (ENSATEG00000007018) grm5b (ENSATEG00000007055) ctsc (ENSATEG00000007121) RAB38 (ENSATEG00000026357) ENSATEG00000007329 ENSATEG00000007357 ENSATEG00000007385 #22 ENSATEG00000007791 #23 gria4a (ENSATEG00000007802) ##33 MSANTD4 (ENSATEG00000007859) #34 aasdhppt (ENSATEG00000007896) #36 GUCY1A2 (ENSATEG00000007937) cwf19l2 (ENSATEG00000008079) ALKBH8 (ENSATEG00000008092) ENSATEG00000008192 #35 ENSATEG00000008231 ENSATEG00000026950 P2RY6 (ENSATEG00000029335) ENSATEG00000008285 relt (ENSATEG00000008376) ENSATEG00000027947 ENSATEG00000008471 Zig-zag eel MODERN SPECIES 4 ANAPC15 (ENSMAMG00000025907) TOMT (ENSMAMG00000006377) ENSMAMG00000006384 lamtor1 (ENSMAMG00000026349) lrrc51 (ENSMAMG00000025288) ENSMAMG00000006425 ENSMAMG00000024322 naalad2 (ENSMAMG00000006462) NOX4 (ENSMAMG00000006542) tyr (ENSMAMG00000006563) grm5b (ENSMAMG00000006586) ctsc (ENSMAMG00000006634) RAB38 (ENSMAMG00000006682) ENSMAMG00000006693 ENSMAMG00000006713 ENSMAMG00000006729 #22 ENSMAMG00000006910 #23 gria4a (ENSMAMG00000006928) ##33 MSANTD4 (ENSMAMG00000006962) #34 aasdhppt (ENSMAMG00000025831) #36 GUCY1A2 (ENSMAMG00000006999) cwf19l2 (ENSMAMG00000007109) ALKBH8 (ENSMAMG00000007121) ENSMAMG00000007134 #35 ENSMAMG00000007163 P2RY6 (ENSMAMG00000024565) ENSMAMG00000007192 relt (ENSMAMG00000007236) ENSMAMG00000007248 ENSMAMG00000007269 ENSMAMG00000007332 Carangaria ANCESTRAL SPECIES 8 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT01070000254066 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d Carangaria_A ANCESTRAL SPECIES 10 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00950000183078.b.a.a ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Seriola ANCESTRAL SPECIES 50 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00950000183078.b.a.a ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Greater amberjack MODERN SPECIES 54 tomt (ENSSDUG00000000620) ENSSDUG00000000632 lamtor1 (ENSSDUG00000000638) lrrc51 (ENSSDUG00000000650) ENSSDUG00000000661 ENSSDUG00000000683 chordc1a (ENSSDUG00000000692) naalad2 (ENSSDUG00000000768) ENSSDUG00000000879 tyr (ENSSDUG00000000940) grm5b (ENSSDUG00000000971) ctsc (ENSSDUG00000001041) RAB38 (ENSSDUG00000001077) fzd4 (ENSSDUG00000001085) ENSSDUG00000001130 DYNC2H1 (ENSSDUG00000001178) #22 PDGFD (ENSSDUG00000001431) #23 gria4a (ENSSDUG00000001467) ##33 MSANTD4 (ENSSDUG00000001513) #34 aasdhppt (ENSSDUG00000001545) #36 GUCY1A2 (ENSSDUG00000001564) cwf19l2 (ENSSDUG00000001587) ALKBH8 (ENSSDUG00000001609) KBTBD3 (ENSSDUG00000001635) #35 fam168a (ENSSDUG00000001674) P2RY6 (ENSSDUG00000001681) ARHGEF17 (ENSSDUG00000001690) relt (ENSSDUG00000001727) P2RY2 (ENSSDUG00000001786) FCHSD2 (ENSSDUG00000001889) ENSSDUG00000002091 Yellowtail amberjack MODERN SPECIES 2741 tomt (ENSSLDG00000020804) ENSSLDG00000020817 lamtor1 (ENSSLDG00000020827) lrrc51 (ENSSLDG00000020850) ENSSLDG00000020906 ENSSLDG00000020936 chordc1a (ENSSLDG00000020956) naalad2 (ENSSLDG00000020972) ENSSLDG00000021003 tyr (ENSSLDG00000021033) grm5b (ENSSLDG00000021052) ctsc (ENSSLDG00000021097) RAB38 (ENSSLDG00000021121) fzd4 (ENSSLDG00000021128) ENSSLDG00000021159 DYNC2H1 (ENSSLDG00000021203) #22 ENSSLDG00000021369 #23 gria4a (ENSSLDG00000021391) ##33 ENSSLDG00000021429 #34 aasdhppt (ENSSLDG00000021456) #36 Barramundi perch MODERN SPECIES 205 tomt (ENSLCAG00010021440) ENSLCAG00010021442 lamtor1 (ENSLCAG00010021443) lrrc51 (ENSLCAG00010021444) ENSLCAG00010021448 ENSLCAG00010021452 chordc1a (ENSLCAG00010021455) naalad2 (ENSLCAG00010021505) NOX4 (ENSLCAG00010021616) tyr (ENSLCAG00010021647) grm5b (ENSLCAG00010021672) ctsc (ENSLCAG00010021706) RAB38 (ENSLCAG00010021710) fzd4 (ENSLCAG00010021715) ENSLCAG00010021722 DYNC2H1 (ENSLCAG00010021810) #22 ENSLCAG00010022031 #23 ENSLCAG00010022357 ##33 ENSLCAG00010023231 aasdhppt (ENSLCAG00010023251) #36 Pleuronectoidei ANCESTRAL SPECIES 13 ENSGT00390000000938 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT01070000254066 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d Turbot MODERN SPECIES 15 ANAPC15 (ENSSMAG00000019561) TOMT (ENSSMAG00000019555) ENSSMAG00000019546 lamtor1 (ENSSMAG00000026615) lrrc51 (ENSSMAG00000030122) ENSSMAG00000019481 ENSSMAG00000019471 naalad2 (ENSSMAG00000019448) ENSSMAG00000019367 tyr (ENSSMAG00000019336) grm5b (ENSSMAG00000019258) ctsc (ENSSMAG00000019244) RAB38 (ENSSMAG00000019236) ENSSMAG00000019226 ENSSMAG00000019220 ENSSMAG00000019098 #22 ENSSMAG00000019088 #23 gria4a (ENSSMAG00000019047) ##33 MSANTD4 (ENSSMAG00000019011) #34 aasdhppt (ENSSMAG00000023242) #36 cwf19l2 (ENSSMAG00000018965) ALKBH8 (ENSSMAG00000018948) ENSSMAG00000018938 #35 fam168a (ENSSMAG00000018924) P2RY6 (ENSSMAG00000018918) ENSSMAG00000018886 ENSSMAG00000031194 relt (ENSSMAG00000018867) ENSSMAG00000018864 ENSSMAG00000018831 ENSSMAG00000018793 Tongue sole MODERN SPECIES 14 folr (ENSCSEG00000018981) anapc15 (ENSCSEG00000018973) tomt (ENSCSEG00000018970) ENSCSEG00000018967 lamtor1 (ENSCSEG00000018964) lrrc51 (ENSCSEG00000018959) ENSCSEG00000018933 ENSCSEG00000018921 naalad2 (ENSCSEG00000018897) ENSCSEG00000018844 tyr (ENSCSEG00000018726) grm5b (ENSCSEG00000018704) ctsc (ENSCSEG00000018687) fzd4 (ENSCSEG00000018675) ENSCSEG00000018672 DYNC2H1 (ENSCSEG00000018584) #22 PDGFD (ENSCSEG00000018567) #23 ENSCSEG00000018562 gria4a (ENSCSEG00000018554) ##33 MSANTD4 (ENSCSEG00000018536) #34 aasdhppt (ENSCSEG00000018532) #36 GUCY1A2 (ENSCSEG00000018527) ENSCSEG00000018521 ALKBH8 (ENSCSEG00000018513) ENSCSEG00000018509 KBTBD3 (ENSCSEG00000018504) #35 fam168a (ENSCSEG00000018495) P2RY6 (ENSCSEG00000018492) ARHGEF17 (ENSCSEG00000018477) relt (ENSCSEG00000018467) P2RY2 (ENSCSEG00000018462) Eupercaria ANCESTRAL SPECIES 7 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT01070000254066 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d Tetraodontidae ANCESTRAL SPECIES 10 ENSGT00940000161147 ENSGT00940000156576 ENSGT00950000183144.A ENSGT00940000161220 ENSGT00390000016789 ENSGT00940000166338 ENSGT01030000234598.b.a.b.d ENSGT00940000167196 ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00530000067879 ENSGT00940000157141 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00390000016051.a.d ENSGT00510000046732.A.d ENSGT00940000165320 Tetraodon DUPLICATION Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 CDT1 (ENSTNIG00000003932) aprt (ENSTNIG00000003933) tk2 (ENSTNIG00000002720) nvl (ENSTNIG00000002721) polr1b (ENSTNIG00000002722) nanp (ENSTNIG00000002723) ENSTNIG00000001121 ENSTNIG00000000692 ENSTNIG00000000685 hsf4 (ENSTNIG00000002981) ENSTNIG00000014245 ENSTNIG00000014244 fzd4 (ENSTNIG00000007165) DYNC2H1 (ENSTNIG00000007164) #22 ENSTNIG00000007163 #22 ENSTNIG00000005246 #22 PDGFD (ENSTNIG00000005245) #23 ENSTNIG00000003904 ##33 aasdhppt (ENSTNIG00000003903) #36 SLC29A1 (ENSTNIG00000005073) ENSTNIG00000005072 ENSTNIG00000000221 sos1 (ENSTNIG00000005071) slc22a7a (ENSTNIG00000005070) kcnh1b (ENSTNIG00000005069) rcor3 (ENSTNIG00000005068) ENSTNIG00000005067 ENSTNIG00000005066 ENSTNIG00000005065 pgap4 (ENSTNIG00000005064) MAL (ENSTNIG00000005063) Tetraodon MODERN SPECIES 26 ttc27 (ENSTNIG00000005511) ENSTNIG00000005512 CDT1 (ENSTNIG00000003932) aprt (ENSTNIG00000003933) tk2 (ENSTNIG00000002720) nvl (ENSTNIG00000002721) polr1b (ENSTNIG00000002722) nanp (ENSTNIG00000002723) ENSTNIG00000001121 ENSTNIG00000000692 ENSTNIG00000000685 hsf4 (ENSTNIG00000002981) ENSTNIG00000014245 ENSTNIG00000014244 fzd4 (ENSTNIG00000007165) DYNC2H1 (ENSTNIG00000007164) #22 ENSTNIG00000007163 #22 ENSTNIG00000005246 #22 PDGFD (ENSTNIG00000005245) #23 ENSTNIG00000003904 ##33 aasdhppt (ENSTNIG00000003903) #36 SLC29A1 (ENSTNIG00000005073) ENSTNIG00000005072 ENSTNIG00000000221 sos1 (ENSTNIG00000005071) slc22a7a (ENSTNIG00000005070) kcnh1b (ENSTNIG00000005069) rcor3 (ENSTNIG00000005068) ENSTNIG00000005067 ENSTNIG00000005066 ENSTNIG00000005065 Tetraodon MODERN SPECIES 26 ENSTNIG00000005512 CDT1 (ENSTNIG00000003932) aprt (ENSTNIG00000003933) tk2 (ENSTNIG00000002720) nvl (ENSTNIG00000002721) polr1b (ENSTNIG00000002722) nanp (ENSTNIG00000002723) ENSTNIG00000001121 ENSTNIG00000000692 ENSTNIG00000000685 hsf4 (ENSTNIG00000002981) ENSTNIG00000014245 ENSTNIG00000014244 fzd4 (ENSTNIG00000007165) DYNC2H1 (ENSTNIG00000007164) #22 ENSTNIG00000007163 #22 ENSTNIG00000005246 #22 PDGFD (ENSTNIG00000005245) #23 ENSTNIG00000003904 ##33 aasdhppt (ENSTNIG00000003903) #36 SLC29A1 (ENSTNIG00000005073) ENSTNIG00000005072 ENSTNIG00000000221 sos1 (ENSTNIG00000005071) slc22a7a (ENSTNIG00000005070) kcnh1b (ENSTNIG00000005069) rcor3 (ENSTNIG00000005068) ENSTNIG00000005067 ENSTNIG00000005066 ENSTNIG00000005065 pgap4 (ENSTNIG00000005064) Fugu MODERN SPECIES 2 phox2a (ENSTRUG00000009916) inppl1a (ENSTRUG00000009438) folr (ENSTRUG00000009430) lamtor1 (ENSTRUG00000023989) tomt (ENSTRUG00000009353) ENSTRUG00000022827 naalad2 (ENSTRUG00000008489) ENSTRUG00000030580 NOX4 (ENSTRUG00000008102) tyr (ENSTRUG00000007845) grm5b (ENSTRUG00000006938) ctsc (ENSTRUG00000006734) RAB38 (ENSTRUG00000006585) ENSTRUG00000022837 fzd4 (ENSTRUG00000006345) ENSTRUG00000023004 #22 PDGFD (ENSTRUG00000004007) #23 ENSTRUG00000031824 ENSTRUG00000028864 ENSTRUG00000027384 ENSTRUG00000031203 gria4a (ENSTRUG00000008169) ##33 aasdhppt (ENSTRUG00000008076) #36 GUCY1A2 (ENSTRUG00000007435) cwf19l2 (ENSTRUG00000007225) ALKBH8 (ENSTRUG00000006986) KBTBD3 (ENSTRUG00000006862) #35 fam168a (ENSTRUG00000006855) P2RY6 (ENSTRUG00000006443) ARHGEF17 (ENSTRUG00000006375) relt (ENSTRUG00000006234) Eupecaria_A ANCESTRAL SPECIES 9 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT01070000254066 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 339 grm5b (ENSLBEG00000004743) ctsc (ENSLBEG00000004699) RAB38 (ENSLBEG00000004665) fzd4 (ENSLBEG00000004638) ENSLBEG00000004621 ENSLBEG00000004584 #22 ENSLBEG00000004570 #22 DYNC2H1 (ENSLBEG00000004433) #22 ENSLBEG00000004387 #23 ENSLBEG00000004356 ##33 Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 339 grm5b (ENSLBEG00000004743) ctsc (ENSLBEG00000004699) RAB38 (ENSLBEG00000004665) fzd4 (ENSLBEG00000004638) ENSLBEG00000004621 ENSLBEG00000004584 #22 ENSLBEG00000004570 #22 DYNC2H1 (ENSLBEG00000004433) #22 ENSLBEG00000004387 #23 ENSLBEG00000004356 ##33 Ballan wrasse MODERN SPECIES 339 grm5b (ENSLBEG00000004743) ctsc (ENSLBEG00000004699) RAB38 (ENSLBEG00000004665) fzd4 (ENSLBEG00000004638) ENSLBEG00000004621 ENSLBEG00000004584 #22 ENSLBEG00000004570 #22 DYNC2H1 (ENSLBEG00000004433) #22 ENSLBEG00000004387 #23 ENSLBEG00000004356 ##33 Eupecaria_B ANCESTRAL SPECIES 9 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT01070000254066 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d Perciformes ANCESTRAL SPECIES 10 ENSGT00390000000938 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Perciformes_a ANCESTRAL SPECIES 9 ENSGT00390000000938 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Pike perch MODERN SPECIES 14 ENSSLUG00000005797 naalad2 (ENSSLUG00000005942) NOX4 (ENSSLUG00000008560) tyr (ENSSLUG00000008654) grm5b (ENSSLUG00000008667) ctsc (ENSSLUG00000008806) RAB38 (ENSSLUG00000008807) fzd4 (ENSSLUG00000008835) ENSSLUG00000009123 DYNC2H1 (ENSSLUG00000009394) #22 ENSSLUG00000011742 #23 gria4a (ENSSLUG00000011775) ##33 MSANTD4 (ENSSLUG00000011817) #34 aasdhppt (ENSSLUG00000011860) #36 GUCY1A2 (ENSSLUG00000011866) cwf19l2 (ENSSLUG00000011878) ALKBH8 (ENSSLUG00000011896) KBTBD3 (ENSSLUG00000011907) #35 fam168a (ENSSLUG00000011923) P2RY6 (ENSSLUG00000011931) ARHGEF17 (ENSSLUG00000011942) relt (ENSSLUG00000011963) P2RY2 (ENSSLUG00000011966) FCHSD2 (ENSSLUG00000011989) ENSSLUG00000012082 Channel bull blenny MODERN SPECIES 4 tomt (ENSCGOG00000015622) ENSCGOG00000015665 lamtor1 (ENSCGOG00000015668) lrrc51 (ENSCGOG00000015672) ENSCGOG00000015675 naalad2 (ENSCGOG00000015723) NOX4 (ENSCGOG00000016884) tyr (ENSCGOG00000016888) grm5b (ENSCGOG00000016897) ctsc (ENSCGOG00000016923) RAB38 (ENSCGOG00000016979) ENSCGOG00000016982 fzd4 (ENSCGOG00000016983) ENSCGOG00000016985 ENSCGOG00000016986 DYNC2H1 (ENSCGOG00000017010) #22 ENSCGOG00000017229 #23 gria4a (ENSCGOG00000017269) ##33 MSANTD4 (ENSCGOG00000018407) #34 aasdhppt (ENSCGOG00000018409) #36 GUCY1A2 (ENSCGOG00000018410) cwf19l2 (ENSCGOG00000004080) ALKBH8 (ENSCGOG00000004170) KBTBD3 (ENSCGOG00000004381) #35 fam168a (ENSCGOG00000004393) P2RY6 (ENSCGOG00000004400) ARHGEF17 (ENSCGOG00000004406) relt (ENSCGOG00000004490) P2RY2 (ENSCGOG00000004496) FCHSD2 (ENSCGOG00000004507) ENSCGOG00000004616 Cottioidei ANCESTRAL SPECIES 4 ENSGT00390000000938 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Stickleback MODERN SPECIES tomt (ENSGACG00000007832) ENSGACG00000007837 lamtor1 (ENSGACG00000007841) lrrc51 (ENSGACG00000007856) ENSGACG00000007861 ENSGACG00000007877 ENSGACG00000007884 naalad2 (ENSGACG00000007887) NOX4 (ENSGACG00000007953) tyr (ENSGACG00000007960) grm5b (ENSGACG00000007968) ctsc (ENSGACG00000007985) RAB38 (ENSGACG00000008046) fzd4 (ENSGACG00000008058) ENSGACG00000008066 DYNC2H1 (ENSGACG00000008068) #22 PDGFD (ENSGACG00000008121) #23 gria4a (ENSGACG00000008129) ##33 MSANTD4 (ENSGACG00000008149) #34 aasdhppt (ENSGACG00000008154) #36 GUCY1A2 (ENSGACG00000008161) cwf19l2 (ENSGACG00000008165) ALKBH8 (ENSGACG00000008185) KBTBD3 (ENSGACG00000008191) #35 fam168a (ENSGACG00000008193) P2RY6 (ENSGACG00000008198) ARHGEF17 (ENSGACG00000008207) relt (ENSGACG00000008224) P2RY2 (ENSGACG00000008228) P2RY2 (ENSGACG00000008233) FCHSD2 (ENSGACG00000008238) Lumpfish MODERN SPECIES 4 anapc15 (ENSCLMG00005015360) tomt (ENSCLMG00005015362) ENSCLMG00005015369 lamtor1 (ENSCLMG00005015370) lrrc51 (ENSCLMG00005015373) ENSCLMG00005015385 ENSCLMG00005001354 naalad2 (ENSCLMG00005001781) ENSCLMG00005006657 tyr (ENSCLMG00005006660) grm5b (ENSCLMG00005006663) ctsc (ENSCLMG00005006673) RAB38 (ENSCLMG00005006675) fzd4 (ENSCLMG00005006684) ENSCLMG00005006686 ENSCLMG00005006689 #22 PDGFD (ENSCLMG00005006691) #23 gria4a (ENSCLMG00005006693) ##33 MSANTD4 (ENSCLMG00005007046) #34 aasdhppt (ENSCLMG00005007047) #36 GUCY1A2 (ENSCLMG00005007048) cwf19l2 (ENSCLMG00005007056) ALKBH8 (ENSCLMG00005007078) KBTBD3 (ENSCLMG00005007079) #35 fam168a (ENSCLMG00005007082) P2RY6 (ENSCLMG00005007084) ARHGEF17 (ENSCLMG00005007086) relt (ENSCLMG00005007088) P2RY2 (ENSCLMG00005007089) FCHSD2 (ENSCLMG00005007093) ENSCLMG00005007094 Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT01070000254066 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d Gilthead seabream MODERN SPECIES 11 anapc15 (ENSSAUG00010010864) tomt (ENSSAUG00010010854) ENSSAUG00010010853 lamtor1 (ENSSAUG00010010852) lrrc51 (ENSSAUG00010010850) ENSSAUG00010010848 ENSSAUG00010010845 naalad2 (ENSSAUG00010010665) ENSSAUG00010010656 tyr (ENSSAUG00010010654) grm5b (ENSSAUG00010007984) ctsc (ENSSAUG00010007964) RAB38 (ENSSAUG00010007963) fzd4 (ENSSAUG00010007962) ENSSAUG00010007949 DYNC2H1 (ENSSAUG00010007811) #22 ENSSAUG00010007793 PDGFD (ENSSAUG00010007790) #23 ENSSAUG00010007787 gria4a (ENSSAUG00010000574) ##33 MSANTD4 (ENSSAUG00010000201) #34 aasdhppt (ENSSAUG00010000190) #36 GUCY1A2 (ENSSAUG00010000180) cwf19l2 (ENSSAUG00010000156) ALKBH8 (ENSSAUG00010000131) ENSSAUG00010000118 KBTBD3 (ENSSAUG00010000116) #35 fam168a (ENSSAUG00010000112) P2RY6 (ENSSAUG00010023197) ARHGEF17 (ENSSAUG00010023164) relt (ENSSAUG00010023162) Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 European seabass MODERN SPECIES 3 TOMT (ENSDLAG00005012209) ENSDLAG00005012216 lamtor1 (ENSDLAG00005032867) lrrc51 (ENSDLAG00005027669) ENSDLAG00005012231 ENSDLAG00005012263 ENSDLAG00005004224 naalad2 (ENSDLAG00005004271) ENSDLAG00005012279 tyr (ENSDLAG00005012407) grm5b (ENSDLAG00005012505) ctsc (ENSDLAG00005017730) RAB38 (ENSDLAG00005017739) ENSDLAG00005029202 ENSDLAG00005030448 ENSDLAG00005017921 #22 ENSDLAG00005010564 ENSDLAG00005018643 #23 gria4a (ENSDLAG00005018694) ##33 MSANTD4 (ENSDLAG00005020254) #34 aasdhppt (ENSDLAG00005020258) #36 GUCY1A2 (ENSDLAG00005020279) cwf19l2 (ENSDLAG00005020290) ALKBH8 (ENSDLAG00005020332) ENSDLAG00005020364 #35 fam168a (ENSDLAG00005033044) ENSDLAG00005020401 relt (ENSDLAG00005031409) ENSDLAG00005020497 ENSDLAG00005020509 ENSDLAG00005020650 Large yellow croaker DUPLICATION Large yellow croaker MODERN SPECIES 479 akt2 (ENSLCRG00005012318) ccnp (ENSLCRG00005012616) si:ch211-132b12.7 (ENSLCRG00005012618) si:ch211-132b12.2 (ENSLCRG00005012620) ENSLCRG00005012625 ENSLCRG00005012628 rap1gap2a (ENSLCRG00005012652) ENSLCRG00005012659 blmh (ENSLCRG00005012661) slc6a4a (ENSLCRG00005012865) SSH2 (ENSLCRG00005012964) ankrd13b (ENSLCRG00005012970) GIT1 (ENSLCRG00005012986) ENSLCRG00005015175 igsf11 (ENSLCRG00005015177) ENSLCRG00005015178 #22 ENSLCRG00005015180 #23 gria4a (ENSLCRG00005015212) ##33 MSANTD4 (ENSLCRG00005018185) #34 aasdhppt (ENSLCRG00005018187) #36 GUCY1A2 (ENSLCRG00005018188) ENSLCRG00005018189 cwf19l2 (ENSLCRG00005018191) ALKBH8 (ENSLCRG00005018196) KBTBD3 (ENSLCRG00005018197) #35 fam168a (ENSLCRG00005018198) P2RY6 (ENSLCRG00005018200) ARHGEF17 (ENSLCRG00005018204) relt (ENSLCRG00005018213) P2RY2 (ENSLCRG00005018215) FCHSD2 (ENSLCRG00005018218) Large yellow croaker MODERN SPECIES 479 folr (ENSLCRG00005004147) anapc15 (ENSLCRG00005004146) ENSLCRG00005004144 lamtor1 (ENSLCRG00005004143) lrrc51 (ENSLCRG00005004142) ENSLCRG00005004132 ENSLCRG00005004128 naalad2 (ENSLCRG00005004105) ENSLCRG00005004096 tyr (ENSLCRG00005004091) grm5b (ENSLCRG00005004019) ctsc (ENSLCRG00005004011) RAB38 (ENSLCRG00005004010) fzd4 (ENSLCRG00005004009) ENSLCRG00005004008 DYNC2H1 (ENSLCRG00005003982) #22 ENSLCRG00005003968 ENSLCRG00005003967 ENSLCRG00005003966 ENSLCRG00005003965 LSAMP (ENSLCRG00005003964) gap43 (ENSLCRG00005003963) ENSLCRG00005003961 ENSLCRG00005003959 ENSLCRG00005003957 ENSLCRG00005003956 ENSLCRG00005003955 SIK3 (ENSLCRG00005003094) SIDT2 (ENSLCRG00005000327) ENSLCRG00005018108 ENSLCRG00005018100 Ovalentaria ANCESTRAL SPECIES 8 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Pomacentridae ANCESTRAL SPECIES 5 ENSGT00390000000938 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000178184 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d Pomacentridae_A ANCESTRAL SPECIES 4 ENSGT00390000000938 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000178184 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d Amphiprion ANCESTRAL SPECIES 6 ENSGT00390000000938 ENSGT00940000161220.c ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000180645 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d Clown anemonefish MODERN SPECIES 1314 ENSAOCG00000021484 naalad2 (ENSAOCG00000021585) NOX4 (ENSAOCG00000001580) tyr (ENSAOCG00000001583) grm5b (ENSAOCG00000001586) ctsc (ENSAOCG00000021766) RAB38 (ENSAOCG00000021781) fzd4 (ENSAOCG00000021812) ENSAOCG00000021835 DYNC2H1 (ENSAOCG00000022126) #22 ENSAOCG00000022164 #23 gria4a (ENSAOCG00000022249) ##33 ENSAOCG00000022266 #34 aasdhppt (ENSAOCG00000022274) #36 Orange clownfish MODERN SPECIES 23 anapc15 (ENSAPEG00000017391) tomt (ENSAPEG00000017367) ENSAPEG00000017352 lamtor1 (ENSAPEG00000017322) lrrc51 (ENSAPEG00000017266) ENSAPEG00000017209 ENSAPEG00000017166 naalad2 (ENSAPEG00000017110) ENSAPEG00000017063 tyr (ENSAPEG00000017027) grm5b (ENSAPEG00000016973) ctsc (ENSAPEG00000016927) RAB38 (ENSAPEG00000016912) fzd4 (ENSAPEG00000016886) ENSAPEG00000016867 DYNC2H1 (ENSAPEG00000016563) #22 ENSAPEG00000016547 #23 gria4a (ENSAPEG00000016480) ##33 MSANTD4 (ENSAPEG00000016450) #34 aasdhppt (ENSAPEG00000016415) #36 ENSAPEG00000016396 GUCY1A2 (ENSAPEG00000016368) cwf19l2 (ENSAPEG00000016319) ALKBH8 (ENSAPEG00000016243) KBTBD3 (ENSAPEG00000016197) #35 fam168a (ENSAPEG00000016167) P2RY6 (ENSAPEG00000016147) ENSAPEG00000016135 ENSAPEG00000016093 relt (ENSAPEG00000016058) P2RY2 (ENSAPEG00000016001) Spiny chromis DUPLICATION Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 1803 ENSAPOG00000002913 ENSAPOG00000002878 #22 ENSAPOG00000002820 #22 Spiny chromis MODERN SPECIES 1803 ENSAPOG00000002913 ENSAPOG00000002878 #22 ENSAPOG00000002820 #22 Spiny chromis MODERN SPECIES 240 ENSAPOG00000001486 #22 ENSAPOG00000001492 #23 gria4a (ENSAPOG00000001525) ##33 MSANTD4 (ENSAPOG00000001536) #34 aasdhppt (ENSAPOG00000000013) #36 GUCY1A2 (ENSAPOG00000001549) cwf19l2 (ENSAPOG00000001559) ALKBH8 (ENSAPOG00000000864) ENSAPOG00000001577 KBTBD3 (ENSAPOG00000001582) #35 fam168a (ENSAPOG00000001593) Bicolor damselfish MODERN SPECIES 271 anapc15 (ENSSPAG00000020323) tomt (ENSSPAG00000020338) ENSSPAG00000020353 lamtor1 (ENSSPAG00000020362) lrrc51 (ENSSPAG00000020376) ENSSPAG00000020416 ENSSPAG00000020480 naalad2 (ENSSPAG00000020506) ENSSPAG00000020580 tyr (ENSSPAG00000020644) grm5b (ENSSPAG00000020680) ctsc (ENSSPAG00000020724) RAB38 (ENSSPAG00000020749) fzd4 (ENSSPAG00000020755) ENSSPAG00000020770 DYNC2H1 (ENSSPAG00000020790) #22 ENSSPAG00000020991 #23 gria4a (ENSSPAG00000021000) ##33 ENSSPAG00000021040 #34 aasdhppt (ENSSPAG00000021052) #36 Cichlidae ANCESTRAL SPECIES 25 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000177108.b ENSGT00940000177108.a.b ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Midas cichlid MODERN SPECIES 92 ENSACIG00000023306 tyr (ENSACIG00000023289) grm5b (ENSACIG00000023278) ctsc (ENSACIG00000023272) RAB38 (ENSACIG00000023261) fzd4 (ENSACIG00000023119) ENSACIG00000023089 DYNC2H1 (ENSACIG00000023020) #22 PDGFD (ENSACIG00000022996) #23 gria4a (ENSACIG00000022975) ##33 MSANTD4 (ENSACIG00000022963) #34 aasdhppt (ENSACIG00000022951) #36 Pseudocrenilabrinae ANCESTRAL SPECIES 22 ENSGT00920000149201 ENSGT00920000150321 ENSGT00940000165006.d ENSGT00390000011517.a.b ENSGT00940000162662.bb.a.b.b.b.b ENSGT00940000162662.bb.a.b.b.b.a ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Nile tilapia MODERN SPECIES 5 ENSONIG00000005175 ENSONIG00000029512 ENSONIG00000031265 ENSONIG00000029759 chordc1a (ENSONIG00000005171) naalad2 (ENSONIG00000005154) ENSONIG00000005147 tyr (ENSONIG00000005144) grm5b (ENSONIG00000005131) ENSONIG00000035928 ctsc (ENSONIG00000005125) ENSONIG00000032839 RAB38 (ENSONIG00000005122) fzd4 (ENSONIG00000005119) ENSONIG00000041263 DYNC2H1 (ENSONIG00000005098) #22 pdgfd (ENSONIG00000037595) #23 ENSONIG00000036610 gria4a (ENSONIG00000005083) ##33 MSANTD4 (ENSONIG00000005081) #34 aasdhppt (ENSONIG00000005078) #36 GUCY1A2 (ENSONIG00000005074) cwf19l2 (ENSONIG00000005068) ALKBH8 (ENSONIG00000005062) KBTBD3 (ENSONIG00000005060) #35 fam168a (ENSONIG00000005058) P2RY6 (ENSONIG00000034543) ARHGEF17 (ENSONIG00000005049) relt (ENSONIG00000005048) P2RY2 (ENSONIG00000033580) FCHSD2 (ENSONIG00000005044) Pseudocrenilabrinae_A ANCESTRAL SPECIES 15 ENSGT00940000162662.bb.a.b.b.a.a ENSGT00940000177108.a.b ENSGT00940000154174.fb.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Lyretail cichlid MODERN SPECIES 377 ENSNBRG00000015754 ENSNBRG00000015644 ENSNBRG00000015533 ENSNBRG00000015510 ENSNBRG00000015501 naalad2 (ENSNBRG00000015456) NOX4 (ENSNBRG00000015397) tyr (ENSNBRG00000014852) grm5b (ENSNBRG00000014746) ctsc (ENSNBRG00000014727) RAB38 (ENSNBRG00000014703) fzd4 (ENSNBRG00000014685) ENSNBRG00000014672 DYNC2H1 (ENSNBRG00000014440) #22 PDGFD (ENSNBRG00000014379) #23 ENSNBRG00000014372 gria4a (ENSNBRG00000014329) ##33 MSANTD4 (ENSNBRG00000014313) #34 aasdhppt (ENSNBRG00000014282) #36 GUCY1A2 (ENSNBRG00000014177) ENSNBRG00000014148 ALKBH8 (ENSNBRG00000014084) KBTBD3 (ENSNBRG00000014045) #35 fam168a (ENSNBRG00000014019) P2RY6 (ENSNBRG00000013996) ENSNBRG00000013971 relt (ENSNBRG00000013945) FCHSD2 (ENSNBRG00000013902) ENSNBRG00000013881 Haplochromini ANCESTRAL SPECIES 15 ENSGT00940000162662.bb.a.b.b.a.a ENSGT00940000177108.a.b ENSGT00940000154174.fb.b.c ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Burton s mouthbrooder MODERN SPECIES 622 ENSHBUG00000014268 naalad2 (ENSHBUG00000014236) ENSHBUG00000014180 tyr (ENSHBUG00000014085) grm5b (ENSHBUG00000014063) ctsc (ENSHBUG00000014011) RAB38 (ENSHBUG00000013974) fzd4 (ENSHBUG00000013966) ENSHBUG00000013940 DYNC2H1 (ENSHBUG00000013907) #22 ENSHBUG00000013623 #23 ENSHBUG00000013607 Haplochromini_A ANCESTRAL SPECIES 20 ENSGT00920000150321 ENSGT00940000165006.d ENSGT00390000011517.a.b ENSGT00940000162662.bb.a.b.b.b.a.a.b ENSGT00940000162662.bb.a.b.b.b.b ENSGT00940000162662.bb.a.b.b.b.a.b ENSGT00940000154174.fb.b.c ENSGT01030000234598.b.a.b.e.a ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 P. nyererei MODERN SPECIES 298 ENSPNYG00000013437 si:ch211-132b12.2 (ENSPNYG00000013450) ENSPNYG00000013489 ENSPNYG00000013527 ENSPNYG00000013614 ENSPNYG00000013721 ENSPNYG00000013750 naalad2 (ENSPNYG00000013767) NOX4 (ENSPNYG00000013806) tyr (ENSPNYG00000013939) grm5b (ENSPNYG00000014493) ctsc (ENSPNYG00000014582) RAB38 (ENSPNYG00000014605) fzd4 (ENSPNYG00000014635) ENSPNYG00000014652 DYNC2H1 (ENSPNYG00000014705) #22 ENSPNYG00000014846 #23 gria4a (ENSPNYG00000014862) ##33 MSANTD4 (ENSPNYG00000014897) #34 aasdhppt (ENSPNYG00000014922) #36 GUCY1A2 (ENSPNYG00000014953) ENSPNYG00000015061 ALKBH8 (ENSPNYG00000015082) KBTBD3 (ENSPNYG00000015134) #35 fam168a (ENSPNYG00000015146) P2RY6 (ENSPNYG00000015172) ARHGEF17 (ENSPNYG00000015195) relt (ENSPNYG00000015256) P2RY2 (ENSPNYG00000015295) FCHSD2 (ENSPNYG00000015350) ENSPNYG00000015404 Haplochromini_B DUPLICATION Haplochromini_B ANCESTRAL SPECIES ENSGT00940000154620.s #22 Zebra mbuna MODERN SPECIES 991 ENSMZEG00005024646 #22 Haplochromini_B DUPLICATION Haplochromini_B ANCESTRAL SPECIES 9 ENSGT00940000165006.d ENSGT00390000011517.a.b ENSGT00940000162662.bb.a.b.b.b.a.a.b ENSGT00940000162662.bb.a.b.b.b.a.a.a ENSGT00940000162662.bb.a.b.b.b.b ENSGT00940000154174.fb.b.c ENSGT01030000234598.b.a.b.e.a ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620.t.b #22 ENSGT00940000154620.t.a #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 1096 hspa13 (ENSMZEG00005013688) samsn1a (ENSMZEG00005013704) p2rx8 (ENSMZEG00005013728) ENSMZEG00005013796 DHX40 (ENSMZEG00005013826) akt2 (ENSMZEG00005013854) ccnp (ENSMZEG00005013867) ENSMZEG00005013875 si:ch211-132b12.2 (ENSMZEG00005013883) ENSMZEG00005013899 ENSMZEG00005013927 ENSMZEG00005013945 ENSMZEG00005013987 ENSMZEG00005014020 ENSMZEG00005014035 ENSMZEG00005014042 #22 ENSMZEG00005014054 #22 ENSMZEG00005014067 #23 gria4a (ENSMZEG00005014085) ##33 MSANTD4 (ENSMZEG00005014096) #34 aasdhppt (ENSMZEG00005014103) #36 GUCY1A2 (ENSMZEG00005014112) ENSMZEG00005014121 ALKBH8 (ENSMZEG00005014129) KBTBD3 (ENSMZEG00005014137) #35 fam168a (ENSMZEG00005014163) P2RY6 (ENSMZEG00005014171) ARHGEF17 (ENSMZEG00005014183) relt (ENSMZEG00005014214) P2RY2 (ENSMZEG00005014232) FCHSD2 (ENSMZEG00005014255) Zebra mbuna MODERN SPECIES 1096 samsn1a (ENSMZEG00005013704) p2rx8 (ENSMZEG00005013728) ENSMZEG00005013796 DHX40 (ENSMZEG00005013826) akt2 (ENSMZEG00005013854) ccnp (ENSMZEG00005013867) ENSMZEG00005013875 si:ch211-132b12.2 (ENSMZEG00005013883) ENSMZEG00005013899 ENSMZEG00005013927 ENSMZEG00005013945 ENSMZEG00005013987 ENSMZEG00005014020 ENSMZEG00005014035 ENSMZEG00005014042 #22 ENSMZEG00005014054 #22 ENSMZEG00005014067 #23 gria4a (ENSMZEG00005014085) ##33 MSANTD4 (ENSMZEG00005014096) #34 aasdhppt (ENSMZEG00005014103) #36 GUCY1A2 (ENSMZEG00005014112) ENSMZEG00005014121 ALKBH8 (ENSMZEG00005014129) KBTBD3 (ENSMZEG00005014137) #35 fam168a (ENSMZEG00005014163) P2RY6 (ENSMZEG00005014171) ARHGEF17 (ENSMZEG00005014183) relt (ENSMZEG00005014214) P2RY2 (ENSMZEG00005014232) FCHSD2 (ENSMZEG00005014255) ENSMZEG00005014294 Haplochromini_B ANCESTRAL SPECIES 9 ENSGT00920000150321 ENSGT00940000165006.d ENSGT00390000011517.a.b ENSGT00940000162662.bb.a.b.b.b.a.a.b ENSGT00940000162662.bb.a.b.b.b.a.a.a ENSGT00940000162662.bb.a.b.b.b.b ENSGT00940000154174.fb.b.c ENSGT01030000234598.b.a.b.e.a ENSGT00940000159621 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620.t.b #22 ENSGT00940000154620.t.a #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d Eastern happy MODERN SPECIES 5 ENSACLG00000023890 ENSACLG00000023858 kif2c (ENSACLG00000023755) ENSACLG00000023741 ENSACLG00000023725 naalad2 (ENSACLG00000023683) ENSACLG00000023653 tyr (ENSACLG00000023639) ENSACLG00000023633 grm5b (ENSACLG00000023565) ctsc (ENSACLG00000023538) RAB38 (ENSACLG00000023535) fzd4 (ENSACLG00000023472) ENSACLG00000023462 ENSACLG00000023448 DYNC2H1 (ENSACLG00000023242) #22 ENSACLG00000023072 ENSACLG00000023063 #23 ENSACLG00000023056 gria4a (ENSACLG00000022891) ##33 MSANTD4 (ENSACLG00000022856) #34 aasdhppt (ENSACLG00000022845) #36 GUCY1A2 (ENSACLG00000022829) ENSACLG00000022814 ALKBH8 (ENSACLG00000022770) KBTBD3 (ENSACLG00000022742) #35 fam168a (ENSACLG00000022728) P2RY6 (ENSACLG00000022691) ARHGEF17 (ENSACLG00000022646) relt (ENSACLG00000022621) P2RY2 (ENSACLG00000022605) Zebra mbuna MODERN SPECIES 198 grm5b (ENSMZEG00005026579) ctsc (ENSMZEG00005026580) RAB38 (ENSMZEG00005026583) fzd4 (ENSMZEG00005026584) ENSMZEG00005026585 ENSMZEG00005026587 #22 Atherinomorphae ANCESTRAL SPECIES 15 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Cyprinodontiformes ANCESTRAL SPECIES 12 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Aplocheiloidei ANCESTRAL SPECIES 8 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00950000183078.b.a.a ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Mangrove rivulus MODERN SPECIES 145 lrrc51 (ENSKMAG00000007563) ENSKMAG00000007596 ENSKMAG00000007654 naalad2 (ENSKMAG00000007683) ENSKMAG00000007755 tyr (ENSKMAG00000007818) grm5b (ENSKMAG00000007834) ctsc (ENSKMAG00000007894) RAB38 (ENSKMAG00000007927) fzd4 (ENSKMAG00000007941) ENSKMAG00000007965 DYNC2H1 (ENSKMAG00000008036) #22 PDGFD (ENSKMAG00000008232) #23 gria4a (ENSKMAG00000008286) ##33 MSANTD4 (ENSKMAG00000008336) #34 aasdhppt (ENSKMAG00000008354) #36 GUCY1A2 (ENSKMAG00000008377) cwf19l2 (ENSKMAG00000008417) ALKBH8 (ENSKMAG00000008461) KBTBD3 (ENSKMAG00000008488) #35 fam168a (ENSKMAG00000008537) P2RY6 (ENSKMAG00000008551) ARHGEF17 (ENSKMAG00000008565) ENSKMAG00000008591 P2RY2 (ENSKMAG00000008632) FCHSD2 (ENSKMAG00000008737) ENSKMAG00000008779 Turquoise killifish MODERN SPECIES 1615 lrrc51 (ENSNFUG00015003952) Nfu_g_1_000309 (ENSNFUG00015003947) ENSNFUG00015003940 FOLH1 (ENSNFUG00015003697) NOX4 (ENSNFUG00015003612) tyr (ENSNFUG00015003600) ENSNFUG00015003589 grm5b (ENSNFUG00015003499) ctsc (ENSNFUG00015003458) RAB38 (ENSNFUG00015003454) FZD4 (ENSNFUG00015003450) ENSNFUG00015003448 ENSNFUG00015003445 ENSNFUG00015003440 ENSNFUG00015003438 ENSNFUG00015003433 #22 CABZ01114098.1 (ENSNFUG00015003426) #23 gria4a (ENSNFUG00015002682) ##33 ENSNFUG00015002530 CU694319.1 (ENSNFUG00015002527) #34 AASDHPPT (ENSNFUG00015002524) #36 GUCY1A2 (ENSNFUG00015002520) GUCY1A2 (ENSNFUG00015002517) CWF19L2 (ENSNFUG00015002355) ALKBH8 (ENSNFUG00015002292) KBTBD3 (ENSNFUG00015002282) #35 fam168a (ENSNFUG00015002278) P2RY6 (ENSNFUG00015002275) ENSNFUG00015002272 ARHGEF17 (ENSNFUG00015002236) relt (ENSNFUG00015002217) Cyprinodontoidei ANCESTRAL SPECIES 9 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 ENSGT00940000179066 Poeciliinae ANCESTRAL SPECIES 14 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 ENSGT00940000163989.a.b Poecilia ANCESTRAL SPECIES 2 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 ENSGT00940000163989.a.b NAME_6 ANCESTRAL SPECIES 83 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00390000004663.o #36 Amazon molly DUPLICATION Amazon molly MODERN SPECIES 405 anapc15 (ENSPFOG00000008608) TOMT (ENSPFOG00000008581) ENSPFOG00000008540 lamtor1 (ENSPFOG00000008495) lrrc51 (ENSPFOG00000008470) ENSPFOG00000008141 ENSPFOG00000008103 naalad2 (ENSPFOG00000007722) ENSPFOG00000007381 tyr (ENSPFOG00000007303) grm5b (ENSPFOG00000006828) ctsc (ENSPFOG00000006702) RAB38 (ENSPFOG00000006670) fzd4 (ENSPFOG00000006607) ENSPFOG00000006584 ENSPFOG00000024527 #22 DYNC2H1 (ENSPFOG00000006192) #22 PDGFD (ENSPFOG00000006093) #23 ENSPFOG00000005511 ##33 aasdhppt (ENSPFOG00000005427) #36 Amazon molly MODERN SPECIES 405 TOMT (ENSPFOG00000008581) ENSPFOG00000008540 lamtor1 (ENSPFOG00000008495) lrrc51 (ENSPFOG00000008470) ENSPFOG00000008141 ENSPFOG00000008103 naalad2 (ENSPFOG00000007722) ENSPFOG00000007381 tyr (ENSPFOG00000007303) grm5b (ENSPFOG00000006828) ctsc (ENSPFOG00000006702) RAB38 (ENSPFOG00000006670) fzd4 (ENSPFOG00000006607) ENSPFOG00000006584 ENSPFOG00000024527 #22 DYNC2H1 (ENSPFOG00000006192) #22 PDGFD (ENSPFOG00000006093) #23 ENSPFOG00000005511 ##33 aasdhppt (ENSPFOG00000005427) #36 Sailfin molly MODERN SPECIES 741 fzd4 (ENSPLAG00000011659) ENSPLAG00000011674 DYNC2H1 (ENSPLAG00000011833) #22 Guppy MODERN SPECIES 443 anapc15 (ENSPREG00000019439) tomt (ENSPREG00000019451) ENSPREG00000019459 lamtor1 (ENSPREG00000019467) lrrc51 (ENSPREG00000019476) ENSPREG00000019491 ENSPREG00000019552 naalad2 (ENSPREG00000019604) ENSPREG00000019643 tyr (ENSPREG00000019772) grm5b (ENSPREG00000020546) ctsc (ENSPREG00000020586) RAB38 (ENSPREG00000020610) fzd4 (ENSPREG00000020658) ENSPREG00000020698 DYNC2H1 (ENSPREG00000020739) #22 PDGFD (ENSPREG00000020848) #23 gria4a (ENSPREG00000020884) ##33 aasdhppt (ENSPREG00000020916) #36 GUCY1A2 (ENSPREG00000020922) cwf19l2 (ENSPREG00000020945) ALKBH8 (ENSPREG00000020964) KBTBD3 (ENSPREG00000020989) #35 fam168a (ENSPREG00000021006) P2RY6 (ENSPREG00000021011) ENSPREG00000021020 relt (ENSPREG00000021034) P2RY2 (ENSPREG00000021049) FCHSD2 (ENSPREG00000021093) yif1b (ENSPREG00000021167) ENSPREG00000021183 Platyfish MODERN SPECIES 9 anapc15 (ENSXMAG00000027789) tomt (ENSXMAG00000011134) ENSXMAG00000021046 lamtor1 (ENSXMAG00000026503) lrrc51 (ENSXMAG00000011147) ENSXMAG00000025532 ENSXMAG00000011159 naalad2 (ENSXMAG00000011164) ENSXMAG00000011187 tyr (ENSXMAG00000011209) grm5b (ENSXMAG00000011216) ctsc (ENSXMAG00000027463) RAB38 (ENSXMAG00000011258) fzd4 (ENSXMAG00000022124) ENSXMAG00000011269 DYNC2H1 (ENSXMAG00000017973) #22 PDGFD (ENSXMAG00000021494) #23 gria4a (ENSXMAG00000023735) ##33 aasdhppt (ENSXMAG00000028577) #36 GUCY1A2 (ENSXMAG00000018053) cwf19l2 (ENSXMAG00000010875) ENSXMAG00000020990 ALKBH8 (ENSXMAG00000010877) KBTBD3 (ENSXMAG00000027532) #35 fam168a (ENSXMAG00000018078) P2RY6 (ENSXMAG00000026614) ARHGEF17 (ENSXMAG00000025054) relt (ENSXMAG00000026997) P2RY2 (ENSXMAG00000018109) FCHSD2 (ENSXMAG00000018119) ENSXMAG00000018136 NAME_4 ANCESTRAL SPECIES 48 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT00940000177108 ENSGT01030000234598.b.a.b ENSGT00940000167196 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 ENSGT00940000163989.a.b Mummichog MODERN SPECIES 1590 inppl1a (ENSFHEG00000003021) folr (ENSFHEG00000003033) anapc15 (ENSFHEG00000003046) tomt (ENSFHEG00000000089) ENSFHEG00000003067 lamtor1 (ENSFHEG00000003081) lrrc51 (ENSFHEG00000003118) ENSFHEG00000003146 naalad2 (ENSFHEG00000003211) ENSFHEG00000003229 tyr (ENSFHEG00000003241) grm5b (ENSFHEG00000003269) ctsc (ENSFHEG00000003297) RAB38 (ENSFHEG00000003307) fzd4 (ENSFHEG00000003325) DYNC2H1 (ENSFHEG00000003493) #22 PDGFD (ENSFHEG00000003514) #23 gria4a (ENSFHEG00000003548) ##33 aasdhppt (ENSFHEG00000003588) #36 GUCY1A2 (ENSFHEG00000003659) cwf19l2 (ENSFHEG00000003686) ALKBH8 (ENSFHEG00000003699) KBTBD3 (ENSFHEG00000003708) #35 fam168a (ENSFHEG00000003725) P2RY6 (ENSFHEG00000003738) ENSFHEG00000003741 ARHGEF17 (ENSFHEG00000003775) relt (ENSFHEG00000003792) P2RY2 (ENSFHEG00000003797) FCHSD2 (ENSFHEG00000003839) ENSFHEG00000003855 Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 1089 ctps1a (ENSCVAG00000017045) ENSCVAG00000017062 ENSCVAG00000017091 ENSCVAG00000017150 #22 ENSCVAG00000017161 #23 Sheepshead minnow DUPLICATION Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 470 lamtor1 (ENSCVAG00000017717) lrrc51 (ENSCVAG00000017774) ENSCVAG00000017786 ENSCVAG00000017799 ENSCVAG00000017815 naalad2 (ENSCVAG00000017871) ENSCVAG00000017915 tyr (ENSCVAG00000017937) grm5b (ENSCVAG00000018004) ctsc (ENSCVAG00000018043) RAB38 (ENSCVAG00000018050) fzd4 (ENSCVAG00000000901) ENSCVAG00000018109 ENSCVAG00000018248 #22 ENSCVAG00000018267 #22 ENSCVAG00000018350 #22 Sheepshead minnow MODERN SPECIES 470 tomt (ENSCVAG00000017692) ENSCVAG00000000456 lamtor1 (ENSCVAG00000017717) lrrc51 (ENSCVAG00000017774) ENSCVAG00000017786 ENSCVAG00000017799 ENSCVAG00000017815 naalad2 (ENSCVAG00000017871) ENSCVAG00000017915 tyr (ENSCVAG00000017937) grm5b (ENSCVAG00000018004) ctsc (ENSCVAG00000018043) RAB38 (ENSCVAG00000018050) fzd4 (ENSCVAG00000000901) ENSCVAG00000018109 ENSCVAG00000018248 #22 ENSCVAG00000018267 #22 ENSCVAG00000018350 #22 Sheepshead minnow MODERN SPECIES 470 ENSCVAG00000000456 lamtor1 (ENSCVAG00000017717) lrrc51 (ENSCVAG00000017774) ENSCVAG00000017786 ENSCVAG00000017799 ENSCVAG00000017815 naalad2 (ENSCVAG00000017871) ENSCVAG00000017915 tyr (ENSCVAG00000017937) grm5b (ENSCVAG00000018004) ctsc (ENSCVAG00000018043) RAB38 (ENSCVAG00000018050) fzd4 (ENSCVAG00000000901) ENSCVAG00000018109 ENSCVAG00000018248 #22 ENSCVAG00000018267 #22 ENSCVAG00000018350 #22 Oryzias ANCESTRAL SPECIES 8 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT01030000234598.b.a.b ENSGT00940000159621 ENSGT00940000161632 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Oryzias_b ANCESTRAL SPECIES 14 ENSGT00390000000938 ENSGT00940000161220 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT01030000234598.b.a.b ENSGT00940000161632 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Indian medaka DUPLICATION Indian medaka DUPLICATION Indian medaka DUPLICATION Indian medaka MODERN SPECIES 12 tomt (ENSOMEG00000002778) ENSOMEG00000002771 lamtor1 (ENSOMEG00000002763) lrrc51 (ENSOMEG00000002740) ENSOMEG00000002736 ENSOMEG00000002717 naalad2 (ENSOMEG00000001007) ENSOMEG00000002687 tyr (ENSOMEG00000002663) grm5b (ENSOMEG00000002640) ctsc (ENSOMEG00000002605) RAB38 (ENSOMEG00000000048) fzd4 (ENSOMEG00000002595) ENSOMEG00000002585 ENSOMEG00000002573 #22 ENSOMEG00000002548 #22 ENSOMEG00000002540 #22 ENSOMEG00000002523 #22 PDGFD (ENSOMEG00000002512) #23 gria4a (ENSOMEG00000002496) ##33 MSANTD4 (ENSOMEG00000002445) #34 aasdhppt (ENSOMEG00000002431) #36 GUCY1A2 (ENSOMEG00000002410) cwf19l2 (ENSOMEG00000000039) ALKBH8 (ENSOMEG00000002376) KBTBD3 (ENSOMEG00000002362) #35 fam168a (ENSOMEG00000002346) P2RY6 (ENSOMEG00000022528) ARHGEF17 (ENSOMEG00000022502) relt (ENSOMEG00000022444) P2RY2 (ENSOMEG00000022424) Indian medaka MODERN SPECIES 12 anapc15 (ENSOMEG00000002788) tomt (ENSOMEG00000002778) ENSOMEG00000002771 lamtor1 (ENSOMEG00000002763) lrrc51 (ENSOMEG00000002740) ENSOMEG00000002736 ENSOMEG00000002717 naalad2 (ENSOMEG00000001007) ENSOMEG00000002687 tyr (ENSOMEG00000002663) grm5b (ENSOMEG00000002640) ctsc (ENSOMEG00000002605) RAB38 (ENSOMEG00000000048) fzd4 (ENSOMEG00000002595) ENSOMEG00000002585 ENSOMEG00000002573 #22 ENSOMEG00000002548 #22 ENSOMEG00000002540 #22 ENSOMEG00000002523 #22 PDGFD (ENSOMEG00000002512) #23 gria4a (ENSOMEG00000002496) ##33 MSANTD4 (ENSOMEG00000002445) #34 aasdhppt (ENSOMEG00000002431) #36 GUCY1A2 (ENSOMEG00000002410) cwf19l2 (ENSOMEG00000000039) ALKBH8 (ENSOMEG00000002376) KBTBD3 (ENSOMEG00000002362) #35 fam168a (ENSOMEG00000002346) P2RY6 (ENSOMEG00000022528) ARHGEF17 (ENSOMEG00000022502) relt (ENSOMEG00000022444) Indian medaka MODERN SPECIES 12 ENSOMEG00000002771 lamtor1 (ENSOMEG00000002763) lrrc51 (ENSOMEG00000002740) ENSOMEG00000002736 ENSOMEG00000002717 naalad2 (ENSOMEG00000001007) ENSOMEG00000002687 tyr (ENSOMEG00000002663) grm5b (ENSOMEG00000002640) ctsc (ENSOMEG00000002605) RAB38 (ENSOMEG00000000048) fzd4 (ENSOMEG00000002595) ENSOMEG00000002585 ENSOMEG00000002573 #22 ENSOMEG00000002548 #22 ENSOMEG00000002540 #22 ENSOMEG00000002523 #22 PDGFD (ENSOMEG00000002512) #23 gria4a (ENSOMEG00000002496) ##33 MSANTD4 (ENSOMEG00000002445) #34 aasdhppt (ENSOMEG00000002431) #36 GUCY1A2 (ENSOMEG00000002410) cwf19l2 (ENSOMEG00000000039) ALKBH8 (ENSOMEG00000002376) KBTBD3 (ENSOMEG00000002362) #35 fam168a (ENSOMEG00000002346) P2RY6 (ENSOMEG00000022528) ARHGEF17 (ENSOMEG00000022502) relt (ENSOMEG00000022444) P2RY2 (ENSOMEG00000022424) FCHSD2 (ENSOMEG00000022375) Indian medaka MODERN SPECIES 12 lamtor1 (ENSOMEG00000002763) lrrc51 (ENSOMEG00000002740) ENSOMEG00000002736 ENSOMEG00000002717 naalad2 (ENSOMEG00000001007) ENSOMEG00000002687 tyr (ENSOMEG00000002663) grm5b (ENSOMEG00000002640) ctsc (ENSOMEG00000002605) RAB38 (ENSOMEG00000000048) fzd4 (ENSOMEG00000002595) ENSOMEG00000002585 ENSOMEG00000002573 #22 ENSOMEG00000002548 #22 ENSOMEG00000002540 #22 ENSOMEG00000002523 #22 PDGFD (ENSOMEG00000002512) #23 gria4a (ENSOMEG00000002496) ##33 MSANTD4 (ENSOMEG00000002445) #34 aasdhppt (ENSOMEG00000002431) #36 GUCY1A2 (ENSOMEG00000002410) cwf19l2 (ENSOMEG00000000039) ALKBH8 (ENSOMEG00000002376) KBTBD3 (ENSOMEG00000002362) #35 fam168a (ENSOMEG00000002346) P2RY6 (ENSOMEG00000022528) ARHGEF17 (ENSOMEG00000022502) relt (ENSOMEG00000022444) P2RY2 (ENSOMEG00000022424) FCHSD2 (ENSOMEG00000022375) ENSOMEG00000022229 Javanese ricefish MODERN SPECIES 4 anapc15 (ENSOJAG00000021090) tomt (ENSOJAG00000021096) ENSOJAG00000021099 lamtor1 (ENSOJAG00000021104) lrrc51 (ENSOJAG00000021106) ENSOJAG00000005955 ENSOJAG00000006052 naalad2 (ENSOJAG00000006232) ENSOJAG00000008144 tyr (ENSOJAG00000008238) grm5b (ENSOJAG00000008315) ctsc (ENSOJAG00000008944) RAB38 (ENSOJAG00000009061) fzd4 (ENSOJAG00000009071) ENSOJAG00000009084 DYNC2H1 (ENSOJAG00000009205) #22 ENSOJAG00000010135 #23 gria4a (ENSOJAG00000010772) ##33 MSANTD4 (ENSOJAG00000016040) #34 aasdhppt (ENSOJAG00000016052) #36 GUCY1A2 (ENSOJAG00000016063) cwf19l2 (ENSOJAG00000016096) ALKBH8 (ENSOJAG00000016111) KBTBD3 (ENSOJAG00000016203) #35 fam168a (ENSOJAG00000016224) P2RY6 (ENSOJAG00000016248) ARHGEF17 (ENSOJAG00000016273) relt (ENSOJAG00000016561) P2RY2 (ENSOJAG00000016573) FCHSD2 (ENSOJAG00000016597) ENSOJAG00000017110 Oryzias_a ANCESTRAL SPECIES 8 ENSGT00940000156432.b ENSGT00390000016789 ENSGT00510000047925.f ENSGT00940000166338 ENSGT01100000263529.a.b ENSGT01030000234598.b.a.b.h.a ENSGT00940000159621 ENSGT01030000234598.b.a.b.h.b ENSGT00940000161632 ENSGT00940000155336.g.a ENSGT01030000234595.A.a.jb.a ENSGT00940000155787 ENSGT00940000157301.b.f ENSGT00940000157141 ENSGT00530000067879 ENSGT00940000154620 #22 ENSGT00940000159575 #23 ENSGT00940000155677.a ##33 ENSGT00440000039469 #34 ENSGT00390000004663 #36 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000158415 #35 ENSGT00390000005140.a ENSGT01030000234621.C.a.b ENSGT00940000153798.B.l ENSGT00940000160350 ENSGT01030000234621.C.a.a.b ENSGT00510000046732.A.d ENSGT00940000165320 Japanese Medaka HdrR MODERN SPECIES 4 anapc15 (ENSORLG00000024422) tomt (ENSORLG00000011168) ENSORLG00000011145 lamtor1 (ENSORLG00000023696) lrrc51 (ENSORLG00000011128) ENSORLG00000011120 ENSORLG00000011090 naalad2 (ENSORLG00000011078) ENSORLG00000010998 tyr (ENSORLG00000010905) grm5b (ENSORLG00000010875) ctsc (ENSORLG00000010823) RAB38 (ENSORLG00000010789) fzd4 (ENSORLG00000010775) ENSORLG00000010731 DYNC2H1 (ENSORLG00000010725) #22 PDGFD (ENSORLG00000025155) #23 gria4a (ENSORLG00000010595) ##33 MSANTD4 (ENSORLG00000010545) #34 aasdhppt (ENSORLG00000010535) #36 gucy1a2 (ENSORLG00000010515) cwf19l2 (ENSORLG00000010487) ALKBH8 (ENSORLG00000010440) KBTBD3 (ENSORLG00000010413) #35 fam168a (ENSORLG00000010382) P2RY6 (ENSORLG00000022652) ARHGEF17 (ENSORLG00000010324) ENSORLG00000010300 relt (ENSORLG00000023849) FCHSD2 (ENSORLG00000010284) ENSORLG00000010236 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 4718 ENSOSIG00000012289 #22 Chinese medaka MODERN SPECIES 361 ENSOSIG00000005125 DYNC2H1 (ENSOSIG00000003781) #22 PDGFD (ENSOSIG00000003683) #23 ENSOSIG00000003670 Reedfish DUPLICATION Reedfish DUPLICATION Reedfish MODERN SPECIES 12 mtnr1bb (ENSECRG00000003806) fat3a (ENSECRG00000003731) chordc1a (ENSECRG00000003691) naalad2 (ENSECRG00000003672) NOX4 (ENSECRG00000003650) tyr (ENSECRG00000003645) grm5b (ENSECRG00000003638) ctsc (ENSECRG00000003633) RAB38 (ENSECRG00000003627) polr3k (ENSECRG00000003622) tmem135 (ENSECRG00000003613) TMEM135 (ENSECRG00000003607) fzd4 (ENSECRG00000003597) ENSECRG00000003581 ENSECRG00000003575 ENSECRG00000003526 #22 ENSECRG00000003493 #22 ENSECRG00000003483 PDGFD (ENSECRG00000003475) #23 ENSECRG00000003466 gria4b (ENSECRG00000002779) #33 MSANTD4 (ENSECRG00000002703) #34 aasdhppt (ENSECRG00000002677) #36 GUCY1A2 (ENSECRG00000002651) ENSECRG00000002636 ALKBH8 (ENSECRG00000002603) KBTBD3 (ENSECRG00000002576) #35 elmod1 (ENSECRG00000002565) slc35f2 (ENSECRG00000002549) ENSECRG00000002534 cul5a (ENSECRG00000002478) Reedfish MODERN SPECIES 12 fat3a (ENSECRG00000003731) chordc1a (ENSECRG00000003691) naalad2 (ENSECRG00000003672) NOX4 (ENSECRG00000003650) tyr (ENSECRG00000003645) grm5b (ENSECRG00000003638) ctsc (ENSECRG00000003633) RAB38 (ENSECRG00000003627) polr3k (ENSECRG00000003622) tmem135 (ENSECRG00000003613) TMEM135 (ENSECRG00000003607) fzd4 (ENSECRG00000003597) ENSECRG00000003581 ENSECRG00000003575 ENSECRG00000003526 #22 ENSECRG00000003493 #22 ENSECRG00000003483 PDGFD (ENSECRG00000003475) #23 ENSECRG00000003466 gria4b (ENSECRG00000002779) #33 MSANTD4 (ENSECRG00000002703) #34 aasdhppt (ENSECRG00000002677) #36 GUCY1A2 (ENSECRG00000002651) ENSECRG00000002636 ALKBH8 (ENSECRG00000002603) KBTBD3 (ENSECRG00000002576) #35 elmod1 (ENSECRG00000002565) slc35f2 (ENSECRG00000002549) ENSECRG00000002534 cul5a (ENSECRG00000002478) dcun1d5 (ENSECRG00000002439) #21 Reedfish MODERN SPECIES 627 ENSECRG00000019594 #22 Elephant shark MODERN SPECIES 1608 ENSCMIG00000015986 GCC2 (ENSCMIG00000015994) lims1 (ENSCMIG00000016005) ENSCMIG00000016015 RANBP2 (ENSCMIG00000016042) ENSCMIG00000016060 ENSCMIG00000016062 edar (ENSCMIG00000016065) ENSCMIG00000016068 SEPTIN10 (ENSCMIG00000016142) ENSCMIG00000016369 ENSCMIG00000016370 upf3a (ENSCMIG00000016373) ENSCMIG00000016375 ##17 dcun1d5 (ENSCMIG00000016377) #21 DYNC2H1 (ENSCMIG00000016425) #22 PDGFD (ENSCMIG00000016454) #23 gria4b (ENSCMIG00000016711) #33 MSANTD4 (ENSCMIG00000017236) #34 aasdhppt (ENSCMIG00000017239) #36 GUCY1A2 (ENSCMIG00000017242) si:ch73-52e5.2 (ENSCMIG00000017246) CWF19L2 (ENSCMIG00000017255) ALKBH8 (ENSCMIG00000017263) Cyclostomata ANCESTRAL SPECIES ENSGT00940000154620 #22 Hagfish DUPLICATION Hagfish DUPLICATION Hagfish DUPLICATION Hagfish DUPLICATION Hagfish MODERN SPECIES 1050 SCD5 (ENSEBUG00000003421) ENSEBUG00000006878 ENSEBUG00000007529 ENSEBUG00000010683 ENSEBUG00000005577 uba52 (ENSEBUG00000003268) qtrt1 (ENSEBUG00000005878) ENSEBUG00000014977 ENSEBUG00000016414 kcnma1a (ENSEBUG00000016358) ENSEBUG00000000809 ENSEBUG00000005691 ENSEBUG00000008695 ENSEBUG00000007538 ENSEBUG00000014904 ENSEBUG00000010002 #22 ENSEBUG00000012083 #22 ENSEBUG00000001971 #22 ENSEBUG00000005028 #22 ENSEBUG00000008145 #22 ENSEBUG00000016627 sgpl1 (ENSEBUG00000001499) ENSEBUG00000016874 ENSEBUG00000014219 ENSEBUG00000001471 mthfd2 (ENSEBUG00000012976) ENSEBUG00000012321 ENSEBUG00000003882 ENSEBUG00000000431 ENSEBUG00000016197 ENSEBUG00000000411 Hagfish MODERN SPECIES 1050 ENSEBUG00000006878 ENSEBUG00000007529 ENSEBUG00000010683 ENSEBUG00000005577 uba52 (ENSEBUG00000003268) qtrt1 (ENSEBUG00000005878) ENSEBUG00000014977 ENSEBUG00000016414 kcnma1a (ENSEBUG00000016358) ENSEBUG00000000809 ENSEBUG00000005691 ENSEBUG00000008695 ENSEBUG00000007538 ENSEBUG00000014904 ENSEBUG00000010002 #22 ENSEBUG00000012083 #22 ENSEBUG00000001971 #22 ENSEBUG00000005028 #22 ENSEBUG00000008145 #22 ENSEBUG00000016627 sgpl1 (ENSEBUG00000001499) ENSEBUG00000016874 ENSEBUG00000014219 ENSEBUG00000001471 mthfd2 (ENSEBUG00000012976) ENSEBUG00000012321 ENSEBUG00000003882 ENSEBUG00000000431 ENSEBUG00000016197 ENSEBUG00000000411 ENSEBUG00000010406 Hagfish MODERN SPECIES 1050 ENSEBUG00000010683 ENSEBUG00000005577 uba52 (ENSEBUG00000003268) qtrt1 (ENSEBUG00000005878) ENSEBUG00000014977 ENSEBUG00000016414 kcnma1a (ENSEBUG00000016358) ENSEBUG00000000809 ENSEBUG00000005691 ENSEBUG00000008695 ENSEBUG00000007538 ENSEBUG00000014904 ENSEBUG00000010002 #22 ENSEBUG00000012083 #22 ENSEBUG00000001971 #22 ENSEBUG00000005028 #22 ENSEBUG00000008145 #22 ENSEBUG00000016627 sgpl1 (ENSEBUG00000001499) ENSEBUG00000016874 ENSEBUG00000014219 ENSEBUG00000001471 mthfd2 (ENSEBUG00000012976) ENSEBUG00000012321 ENSEBUG00000003882 ENSEBUG00000000431 ENSEBUG00000016197 ENSEBUG00000000411 ENSEBUG00000010406 Hagfish MODERN SPECIES 1050 ENSEBUG00000005577 uba52 (ENSEBUG00000003268) qtrt1 (ENSEBUG00000005878) ENSEBUG00000014977 ENSEBUG00000016414 kcnma1a (ENSEBUG00000016358) ENSEBUG00000000809 ENSEBUG00000005691 ENSEBUG00000008695 ENSEBUG00000007538 ENSEBUG00000014904 ENSEBUG00000010002 #22 ENSEBUG00000012083 #22 ENSEBUG00000001971 #22 ENSEBUG00000005028 #22 ENSEBUG00000008145 #22 ENSEBUG00000016627 sgpl1 (ENSEBUG00000001499) ENSEBUG00000016874 ENSEBUG00000014219 ENSEBUG00000001471 mthfd2 (ENSEBUG00000012976) ENSEBUG00000012321 ENSEBUG00000003882 ENSEBUG00000000431 ENSEBUG00000016197 ENSEBUG00000000411 ENSEBUG00000010406 Hagfish MODERN SPECIES 1050 ENSEBUG00000007529 ENSEBUG00000010683 ENSEBUG00000005577 uba52 (ENSEBUG00000003268) qtrt1 (ENSEBUG00000005878) ENSEBUG00000014977 ENSEBUG00000016414 kcnma1a (ENSEBUG00000016358) ENSEBUG00000000809 ENSEBUG00000005691 ENSEBUG00000008695 ENSEBUG00000007538 ENSEBUG00000014904 ENSEBUG00000010002 #22 ENSEBUG00000012083 #22 ENSEBUG00000001971 #22 ENSEBUG00000005028 #22 ENSEBUG00000008145 #22 ENSEBUG00000016627 sgpl1 (ENSEBUG00000001499) ENSEBUG00000016874 ENSEBUG00000014219 ENSEBUG00000001471 mthfd2 (ENSEBUG00000012976) ENSEBUG00000012321 ENSEBUG00000003882 ENSEBUG00000000431 ENSEBUG00000016197 ENSEBUG00000000411 ENSEBUG00000010406 Lamprey MODERN SPECIES 1284 ENSPMAG00000000525 #22