Vertebrata ANCESTRAL SPECIES ENSGT00940000156252 #22 Gnathostomata ANCESTRAL SPECIES 1014 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 Euteleostomi ANCESTRAL SPECIES 159 ENSGT01030000234597.a.b.b.e.b ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000164970 ENSGT00940000164547 ENSGT00530000064112.a ENSGT00940000154634.c ENSGT00950000182808.b.a ENSGT00730000111180 ENSGT00940000159257 ENSGT00390000005651 ENSGT00940000156907 ENSGT00940000164239 ENSGT00940000163578 ENSGT00940000157414 ENSGT00940000156252 #22 ENSGT00940000157353 ENSGT00390000015564 ENSGT00940000160385 Sarcopterygii ANCESTRAL SPECIES 3 ENSGT00940000155294 ENSGT00940000157988 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000164970 ENSGT00940000164547 ENSGT00940000154634.c ENSGT00950000182808.b.a ENSGT00730000111180 ENSGT00940000159257 ENSGT00390000005651 ENSGT00940000156907 ENSGT00940000164239 ENSGT00940000163578 ENSGT00940000157414 ENSGT00940000156252 #22 ENSGT00940000157353 ENSGT00390000015564 ENSGT00940000160385 ENSGT00940000160659 Tetrapoda ANCESTRAL SPECIES 1 ENSGT00390000001057 ENSGT00940000155294 ENSGT00940000157988 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000164970 ENSGT00940000154634.c ENSGT00950000182808.b.a ENSGT00730000111180 ENSGT00940000159257 ENSGT00390000005651 ENSGT00940000156907 ENSGT00940000164239 ENSGT00940000163578 ENSGT00940000157414 ENSGT00940000156252 #22 ENSGT00940000157353 ENSGT00390000015564 ENSGT00940000160659 ENSGT00940000161270 ENSGT00940000159435 ENSGT00940000160385 ENSGT00390000002200.a.b ##34 ENSGT00940000154635.a ENSGT00950000182992.a.b.b ENSGT00940000154968 ENSGT00940000154824.a ENSGT00390000001688 ENSGT00940000157532 ENSGT00940000156113 ENSGT00940000164654 Amniota ANCESTRAL SPECIES 143 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 Mammalia ANCESTRAL SPECIES 13 ENSGT00940000160687 #7 ENSGT00940000165234 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000163363 ENSGT00940000153717.b #36 Theria ANCESTRAL SPECIES 17 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000163363 ENSGT00940000153717.b #36 Eutheria ANCESTRAL SPECIES 19 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Boreoeutheria ANCESTRAL SPECIES 5 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000164375 ENSGT00940000155200 ENSGT00940000153793 #11 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Euarchontoglires ANCESTRAL SPECIES 5 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000164375 ENSGT00940000155200 ENSGT00940000153793 #11 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Primates ANCESTRAL SPECIES 21 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Haplorrhini ANCESTRAL SPECIES 21 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Simiiformes ANCESTRAL SPECIES 21 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Catarrhini ANCESTRAL SPECIES 11 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00910000146698 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00910000147085 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Cercopithecidae ANCESTRAL SPECIES 8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.e.a #11 ENSGT00910000146698 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00910000147085 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Cercopithecinae ANCESTRAL SPECIES 10 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.e.a #11 ENSGT00910000146698 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00910000147085 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Cercopithecinae_a ANCESTRAL SPECIES 10 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.e.a #11 ENSGT00910000146698 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00910000147085 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Cercopithecinae_b ANCESTRAL SPECIES 5 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.e.a #11 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00910000147085 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Cercopithecinae_d ANCESTRAL SPECIES 4 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.e.a #11 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00910000147085 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Sooty mangabey MODERN SPECIES 96 PDP2 (ENSCATG00000002549) #7 CDH16 (ENSCATG00000036211) #8 RRAD (ENSCATG00000034562) #9 CIAO2B (ENSCATG00000032819) #10 CES2 (ENSCATG00000029478) #11 ENSCATG00000027954 #12 CBFB (ENSCATG00000042676) #13 PHAF1 (ENSCATG00000033027) #14 B3GNT9 (ENSCATG00000000540) #15 TRADD (ENSCATG00000030076) #16 FBXL8 (ENSCATG00000038633) #17 HSF4 (ENSCATG00000042580) #18 ENSCATG00000034821 #19 MATCAP1 (ENSCATG00000037134) #20 EXOC3L1 (ENSCATG00000041980) #21 E2F4 (ENSCATG00000042556) #22 ELMO3 (ENSCATG00000034679) #23 ENSCATG00000033840 #24 TMEM208 (ENSCATG00000039336) #25 FHOD1 (ENSCATG00000036299) #26 SLC9A5 (ENSCATG00000038552) #27 PLEKHG4 (ENSCATG00000044215) #28 KCTD19 (ENSCATG00000037148) #29 LRRC36 (ENSCATG00000035252) #30 TPPP3 (ENSCATG00000019059) #31 ZDHHC1 (ENSCATG00000029639) #32 HSD11B2 (ENSCATG00000037152) #33 ATP6V0D1 (ENSCATG00000033064) #34 AGRP (ENSCATG00000042230) #35 RIPOR1 (ENSCATG00000038948) #36 CTCF (ENSCATG00000042738) #37 Drill MODERN SPECIES 1217 ENSMLEG00000037764 #13 PHAF1 (ENSMLEG00000029921) #14 B3GNT9 (ENSMLEG00000002033) #15 TRADD (ENSMLEG00000034770) #16 FBXL8 (ENSMLEG00000035933) #17 HSF4 (ENSMLEG00000032540) #18 ENSMLEG00000041719 #19 MATCAP1 (ENSMLEG00000036488) #20 EXOC3L1 (ENSMLEG00000027466) #21 E2F4 (ENSMLEG00000036642) #22 ELMO3 (ENSMLEG00000034728) #23 ENSMLEG00000040113 #24 TMEM208 (ENSMLEG00000012936) #25 FHOD1 (ENSMLEG00000043304) #26 SLC9A5 (ENSMLEG00000033811) #27 PLEKHG4 (ENSMLEG00000041775) #28 KCTD19 (ENSMLEG00000041644) #29 LRRC36 (ENSMLEG00000040310) #30 TPPP3 (ENSMLEG00000009666) #31 ZDHHC1 (ENSMLEG00000027489) #32 HSD11B2 (ENSMLEG00000031297) #33 ENSMLEG00000041928 ATP6V0D1 (ENSMLEG00000043793) #34 AGRP (ENSMLEG00000035909) #35 RIPOR1 (ENSMLEG00000035065) #36 Olive baboon MODERN SPECIES 9 NAE1 (ENSPANG00000017004) CA7 (ENSPANG00000019306) PDP2 (ENSPANG00000008640) #7 CDH16 (ENSPANG00000015586) #8 RRAD (ENSPANG00000042893) #9 CIAO2B (ENSPANG00000013428) #10 CBFB (ENSPANG00000008068) #13 PHAF1 (ENSPANG00000018550) #14 B3GNT9 (ENSPANG00000011657) #15 TRADD (ENSPANG00000017334) #16 FBXL8 (ENSPANG00000013427) #17 HSF4 (ENSPANG00000005017) #18 NOL3 (ENSPANG00000030797) #19 MATCAP1 (ENSPANG00000035304) #20 EXOC3L1 (ENSPANG00000000502) #21 E2F4 (ENSPANG00000016794) #22 ELMO3 (ENSPANG00000005501) #23 ENSPANG00000031561 #24 TMEM208 (ENSPANG00000029479) #25 FHOD1 (ENSPANG00000000605) #26 SLC9A5 (ENSPANG00000016265) #27 PLEKHG4 (ENSPANG00000026235) #28 KCTD19 (ENSPANG00000034300) #29 LRRC36 (ENSPANG00000021733) #30 TPPP3 (ENSPANG00000018345) #31 ZDHHC1 (ENSPANG00000008638) #32 HSD11B2 (ENSPANG00000047862) #33 ATP6V0D1 (ENSPANG00000017898) #34 AGRP (ENSPANG00000024565) #35 RIPOR1 (ENSPANG00000008637) #36 CTCF (ENSPANG00000015703) #37 Macaca ANCESTRAL SPECIES 8 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.e.a #11 ENSGT00910000146698 ENSGT00940000155200 ENSGT00390000018132.f #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Pig-tailed macaque MODERN SPECIES 178 RRAD (ENSMNEG00000041942) #9 CIAO2B (ENSMNEG00000034933) #10 CES2 (ENSMNEG00000032898) #11 ENSMNEG00000033775 ENSMNEG00000031450 ENSMNEG00000037132 CBFB (ENSMNEG00000028964) #13 PHAF1 (ENSMNEG00000033604) #14 B3GNT9 (ENSMNEG00000006041) #15 TRADD (ENSMNEG00000018376) #16 FBXL8 (ENSMNEG00000016307) #17 HSF4 (ENSMNEG00000038020) #18 ENSMNEG00000030684 #19 MATCAP1 (ENSMNEG00000040545) #20 EXOC3L1 (ENSMNEG00000030051) #21 E2F4 (ENSMNEG00000025909) #22 ELMO3 (ENSMNEG00000037172) #23 ENSMNEG00000037287 #24 TMEM208 (ENSMNEG00000000037) #25 FHOD1 (ENSMNEG00000040309) #26 SLC9A5 (ENSMNEG00000041562) #27 PLEKHG4 (ENSMNEG00000030662) #28 KCTD19 (ENSMNEG00000041509) #29 LRRC36 (ENSMNEG00000038276) #30 TPPP3 (ENSMNEG00000029652) #31 ZDHHC1 (ENSMNEG00000040984) #32 HSD11B2 (ENSMNEG00000032697) #33 ATP6V0D1 (ENSMNEG00000030202) #34 AGRP (ENSMNEG00000028917) #35 RIPOR1 (ENSMNEG00000031800) #36 CTCF (ENSMNEG00000036416) #37 Macaca_a ANCESTRAL SPECIES 14 ENSGT00940000159757 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.e.a #11 ENSGT00390000018132.f #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Rhesus MODERN SPECIES 12 CDH16 (ENSMMUG00000016727) #8 RRAD (ENSMMUG00000049583) #9 CIAO2B (ENSMMUG00000010919) #10 CES2 (ENSMMUG00000022825) #11 ENSMMUG00000064237 ENSMMUG00000054948 #13 CBFB (ENSMMUG00000058815) #13 PHAF1 (ENSMMUG00000018102) #14 B3GNT9 (ENSMMUG00000007559) #15 TRADD (ENSMMUG00000060314) #16 FBXL8 (ENSMMUG00000050693) #17 HSF4 (ENSMMUG00000005906) #18 NOL3 (ENSMMUG00000020268) #19 MATCAP1 (ENSMMUG00000020266) #20 EXOC3L1 (ENSMMUG00000020254) #21 E2F4 (ENSMMUG00000020258) #22 ELMO3 (ENSMMUG00000020259) #23 LRRC29 (ENSMMUG00000020260) #24 TMEM208 (ENSMMUG00000020263) #25 FHOD1 (ENSMMUG00000018111) #26 SLC9A5 (ENSMMUG00000059990) #27 KCTD19 (ENSMMUG00000004971) #29 LRRC36 (ENSMMUG00000009821) #30 TPPP3 (ENSMMUG00000054637) #31 ZDHHC1 (ENSMMUG00000009825) #32 HSD11B2 (ENSMMUG00000008034) #33 ATP6V0D1 (ENSMMUG00000029105) #34 AGRP (ENSMMUG00000060341) #35 RIPOR1 (ENSMMUG00000017105) #36 CTCF (ENSMMUG00000009798) #37 CARMIL2 (ENSMMUG00000009799) Vervet Monkey MODERN SPECIES 24 CFDP1 (ENSCSAG00000003687) BCAR1 (ENSCSAG00000003690) ENSCSAG00000003696 ENSCSAG00000003711 ZFP1 (ENSCSAG00000003718) LDHD (ENSCSAG00000003721) CBFB (ENSCSAG00000003725) #13 B3GNT9 (ENSCSAG00000018474) #15 PHAF1 (ENSCSAG00000003732) #14 TRADD (ENSCSAG00000003737) #16 FBXL8 (ENSCSAG00000003742) #17 HSF4 (ENSCSAG00000003768) #18 ENSCSAG00000003782 #19 MATCAP1 (ENSCSAG00000003789) #20 EXOC3L1 (ENSCSAG00000003798) #21 E2F4 (ENSCSAG00000003814) #22 ELMO3 (ENSCSAG00000003824) #23 ENSCSAG00000003830 #24 ENSCSAG00000003834 #24 TMEM208 (ENSCSAG00000003843) #25 FHOD1 (ENSCSAG00000003848) #26 SLC9A5 (ENSCSAG00000003857) #27 PLEKHG4 (ENSCSAG00000003865) #28 KCTD19 (ENSCSAG00000003872) #29 LRRC36 (ENSCSAG00000003884) #30 TPPP3 (ENSCSAG00000003890) #31 ZDHHC1 (ENSCSAG00000003895) #32 HSD11B2 (ENSCSAG00000003897) #33 ATP6V0D1 (ENSCSAG00000003900) #34 AGRP (ENSCSAG00000003901) #35 RIPOR1 (ENSCSAG00000003905) #36 Rhinopithecus ANCESTRAL SPECIES 25 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.e.a #11 ENSGT00940000153793.e.b ##11 ENSGT00940000153793.f ##11 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Black snub-nosed monkey MODERN SPECIES 1559 CES2 (ENSRBIG00000028932) ##11 CBFB (ENSRBIG00000028183) #13 PHAF1 (ENSRBIG00000031729) #14 B3GNT9 (ENSRBIG00000041288) #15 TRADD (ENSRBIG00000033518) #16 HSF4 (ENSRBIG00000015925) #18 ENSRBIG00000038421 #19 ENSRBIG00000034061 #19 MATCAP1 (ENSRBIG00000036651) #20 EXOC3L1 (ENSRBIG00000031904) #21 E2F4 (ENSRBIG00000040599) #22 ELMO3 (ENSRBIG00000033071) #23 ENSRBIG00000023382 #24 TMEM208 (ENSRBIG00000036462) #25 FHOD1 (ENSRBIG00000028944) #26 SLC9A5 (ENSRBIG00000028965) #27 PLEKHG4 (ENSRBIG00000027622) #28 KCTD19 (ENSRBIG00000039801) #29 LRRC36 (ENSRBIG00000036501) #30 TPPP3 (ENSRBIG00000037427) #31 ZDHHC1 (ENSRBIG00000030016) #32 HSD11B2 (ENSRBIG00000033356) #33 ATP6V0D1 (ENSRBIG00000034525) #34 AGRP (ENSRBIG00000044991) #35 RIPOR1 (ENSRBIG00000032040) #36 CTCF (ENSRBIG00000034739) #37 Golden snub-nosed monkey MODERN SPECIES 2988 CA7 (ENSRROG00000040146) PDP2 (ENSRROG00000008872) #7 CDH16 (ENSRROG00000044530) #8 RRAD (ENSRROG00000038070) #9 CIAO2B (ENSRROG00000044649) #10 ENSRROG00000043998 ##11 ENSRROG00000035237 #11 CBFB (ENSRROG00000031552) #13 ENSRROG00000031108 #14 TRADD (ENSRROG00000001491) #16 FBXL8 (ENSRROG00000034560) #17 HSF4 (ENSRROG00000042484) #18 ENSRROG00000033912 #19 MATCAP1 (ENSRROG00000012831) #20 EXOC3L1 (ENSRROG00000040665) #21 E2F4 (ENSRROG00000035670) #22 ELMO3 (ENSRROG00000044911) #23 ENSRROG00000031712 #24 TMEM208 (ENSRROG00000032781) #25 FHOD1 (ENSRROG00000033735) #26 SLC9A5 (ENSRROG00000045120) #27 PLEKHG4 (ENSRROG00000045715) #28 KCTD19 (ENSRROG00000033022) #29 LRRC36 (ENSRROG00000033554) #30 TPPP3 (ENSRROG00000036135) #31 ZDHHC1 (ENSRROG00000040272) #32 HSD11B2 (ENSRROG00000028099) #33 ATP6V0D1 (ENSRROG00000009060) #34 AGRP (ENSRROG00000043812) #35 RIPOR1 (ENSRROG00000031142) #36 CTCF (ENSRROG00000038473) #37 Hominoidea ANCESTRAL SPECIES 9 ENSGT00390000017697.b #10 ENSGT00940000153793.d #11 ENSGT00910000146698 ENSGT00940000153793.c #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00910000147085 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Hominidae ANCESTRAL SPECIES 9 ENSGT00940000153793.d #11 ENSGT00910000146698 ENSGT00940000155200.p ENSGT00940000153793.c #11 ENSGT00940000155200.o ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00910000147085 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 19 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.d #11 ENSGT00940000155200.o ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00910000147085 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Homo/Pan group ANCESTRAL SPECIES 19 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.d #11 ENSGT00940000155200.o.a ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00910000147085 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Pan ANCESTRAL SPECIES 19 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.d #11 ENSGT00940000153793.c #11 ENSGT00940000155200.o.a ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b.k #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00910000147085 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Bonobo DUPLICATION Bonobo MODERN SPECIES 7 CA7 (ENSPPAG00000033884) PDP2 (ENSPPAG00000001912) #7 CDH16 (ENSPPAG00000043698) #8 ENSPPAG00000032214 #9 CIAO2B (ENSPPAG00000024574) #10 ENSPPAG00000039720 #11 ENSPPAG00000035018 #13 PHAF1 (ENSPPAG00000038365) #14 B3GNT9 (ENSPPAG00000001847) #15 TRADD (ENSPPAG00000035660) #16 FBXL8 (ENSPPAG00000033828) #17 HSF4 (ENSPPAG00000036811) #18 NOL3 (ENSPPAG00000040533) #19 MATCAP1 (ENSPPAG00000003682) #20 EXOC3L1 (ENSPPAG00000027466) #21 ENSPPAG00000009557 #22 ELMO3 (ENSPPAG00000030509) #23 ENSPPAG00000040320 #24 TMEM208 (ENSPPAG00000027348) #25 FHOD1 (ENSPPAG00000036018) #26 SLC9A5 (ENSPPAG00000040056) #27 PLEKHG4 (ENSPPAG00000043758) #28 KCTD19 (ENSPPAG00000039548) #29 LRRC36 (ENSPPAG00000032136) #30 TPPP3 (ENSPPAG00000039712) #31 ENSPPAG00000030585 #32 HSD11B2 (ENSPPAG00000035249) #33 ENSPPAG00000031006 ATP6V0D1 (ENSPPAG00000039877) #34 AGRP (ENSPPAG00000040052) #35 RIPOR1 (ENSPPAG00000029650) #36 Bonobo MODERN SPECIES 2 OR10A3 (ENSPPAG00000022802) OR10A6 (ENSPPAG00000011852) ENSPPAG00000038922 OR5P3 (ENSPPAG00000025230) OR5P2 (ENSPPAG00000039252) OVCH2 (ENSPPAG00000030544) CYB5R2 (ENSPPAG00000043427) PPFIBP2 (ENSPPAG00000040703) OLFML1 (ENSPPAG00000037899) SYT9 (ENSPPAG00000041481) NLRP14 (ENSPPAG00000039939) ZNF214 (ENSPPAG00000038017) ZNF215 (ENSPPAG00000035352) OR2D3 (ENSPPAG00000006922) OR10A2 (ENSPPAG00000020673) ENSPPAG00000008986 #22 OR10A5 (ENSPPAG00000013772) OR6A2 (ENSPPAG00000009041) OR2AG1 (ENSPPAG00000007655) OR2AG2 (ENSPPAG00000005020) ENSPPAG00000026745 MRPL17 (ENSPPAG00000038749) DCHS1 (ENSPPAG00000038073) TPP1 (ENSPPAG00000035179) ENSPPAG00000036624 ILK (ENSPPAG00000029774) RRP8 (ENSPPAG00000040792) DNHD1 (ENSPPAG00000036498) TIMM10B (ENSPPAG00000040105) ARFIP2 (ENSPPAG00000042484) TRIM3 (ENSPPAG00000036529) Chimpanzee MODERN SPECIES 7 CDH16 (ENSPTRG00000008205) #8 RRAD (ENSPTRG00000008207) #9 CIAO2B (ENSPTRG00000008208) #10 CES2 (ENSPTRG00000051277) #11 ENSPTRG00000008209 #11 CES3 (ENSPTRG00000008210) CBFB (ENSPTRG00000042433) #13 PHAF1 (ENSPTRG00000008214) #14 B3GNT9 (ENSPTRG00000047547) #15 TRADD (ENSPTRG00000008215) #16 FBXL8 (ENSPTRG00000008216) #17 HSF4 (ENSPTRG00000034007) #18 NOL3 (ENSPTRG00000049746) #19 MATCAP1 (ENSPTRG00000031185) #20 EXOC3L1 (ENSPTRG00000008218) #21 E2F4 (ENSPTRG00000031180) #22 ELMO3 (ENSPTRG00000008220) #23 LRRC29 (ENSPTRG00000008221) #24 TMEM208 (ENSPTRG00000008222) #25 FHOD1 (ENSPTRG00000008223) #26 SLC9A5 (ENSPTRG00000008224) #27 PLEKHG4 (ENSPTRG00000008225) #28 KCTD19 (ENSPTRG00000008226) #29 LRRC36 (ENSPTRG00000008227) #30 TPPP3 (ENSPTRG00000050239) #31 ZDHHC1 (ENSPTRG00000008229) #32 HSD11B2 (ENSPTRG00000008230) #33 ENSPTRG00000049931 ATP6V0D1 (ENSPTRG00000008231) #34 AGRP (ENSPTRG00000008232) #35 RIPOR1 (ENSPTRG00000008233) #36 Human MODERN SPECIES 7 CDH16 (ENSG00000166589) #8 RRAD (ENSG00000166592) #9 CIAO2B (ENSG00000166595) #10 CES2 (ENSG00000172831) #11 CES3 (ENSG00000172828) CES4A (ENSG00000172824) #12 CBFB (ENSG00000067955) #13 PHAF1 (ENSG00000125149) #14 B3GNT9 (ENSG00000237172) #15 TRADD (ENSG00000102871) #16 FBXL8 (ENSG00000135722) #17 HSF4 (ENSG00000102878) #18 NOL3 (ENSG00000140939) #19 MATCAP1 (ENSG00000196123) #20 EXOC3L1 (ENSG00000179044) #21 E2F4 (ENSG00000205250) #22 ELMO3 (ENSG00000102890) #23 TMEM208 (ENSG00000168701) #25 FHOD1 (ENSG00000135723) #26 SLC9A5 (ENSG00000135740) #27 PLEKHG4 (ENSG00000196155) #28 KCTD19 (ENSG00000168676) #29 LRRC36 (ENSG00000159708) #30 TPPP3 (ENSG00000159713) #31 ZDHHC1 (ENSG00000159714) #32 HSD11B2 (ENSG00000176387) #33 ATP6V0D1 (ENSG00000159720) #34 AGRP (ENSG00000159723) #35 RIPOR1 (ENSG00000039523) #36 CTCF (ENSG00000102974) #37 CARMIL2 (ENSG00000159753) Gorilla MODERN SPECIES 7 CES2 (ENSGGOG00000008251) #11 ENSGGOG00000043424 ENSGGOG00000043733 ENSGGOG00000040837 CES3 (ENSGGOG00000008262) ENSGGOG00000008270 #12 CBFB (ENSGGOG00000043175) #13 PHAF1 (ENSGGOG00000011866) #14 B3GNT9 (ENSGGOG00000040003) #15 ENSGGOG00000011883 #16 FBXL8 (ENSGGOG00000011893) #17 HSF4 (ENSGGOG00000011899) #18 NOL3 (ENSGGOG00000012278) #19 MATCAP1 (ENSGGOG00000023625) #20 EXOC3L1 (ENSGGOG00000011912) #21 E2F4 (ENSGGOG00000011924) #22 ELMO3 (ENSGGOG00000011935) #23 ENSGGOG00000011956 #24 TMEM208 (ENSGGOG00000001482) #25 FHOD1 (ENSGGOG00000010001) #26 SLC9A5 (ENSGGOG00000010016) #27 PLEKHG4 (ENSGGOG00000015950) #28 KCTD19 (ENSGGOG00000015964) #29 LRRC36 (ENSGGOG00000008469) #30 TPPP3 (ENSGGOG00000008477) #31 ENSGGOG00000008484 #32 HSD11B2 (ENSGGOG00000012970) #33 ENSGGOG00000043327 ATP6V0D1 (ENSGGOG00000012974) #34 AGRP (ENSGGOG00000012981) #35 RIPOR1 (ENSGGOG00000011949) #36 Orangutan MODERN SPECIES 7 RRAD (ENSPPYG00000007432) #9 CIAO2B (ENSPPYG00000041569) #10 ENSPPYG00000007434 #11 CES3 (ENSPPYG00000041300) ENSPPYG00000007435 CES4A (ENSPPYG00000007436) #12 CBFB (ENSPPYG00000007437) #13 PHAF1 (ENSPPYG00000007438) #14 B3GNT9 (ENSPPYG00000007439) #15 TRADD (ENSPPYG00000007440) #16 FBXL8 (ENSPPYG00000041495) #17 HSF4 (ENSPPYG00000007441) #18 ENSPPYG00000007442 #19 MATCAP1 (ENSPPYG00000007443) #20 EXOC3L1 (ENSPPYG00000007444) #21 E2F4 (ENSPPYG00000007445) #22 ELMO3 (ENSPPYG00000007446) #23 ENSPPYG00000007447 #24 TMEM208 (ENSPPYG00000033761) #25 SLC9A5 (ENSPPYG00000007450) #27 PLEKHG4 (ENSPPYG00000007451) #28 KCTD19 (ENSPPYG00000007453) #29 LRRC36 (ENSPPYG00000007454) #30 TPPP3 (ENSPPYG00000039268) #31 ENSPPYG00000007456 #32 HSD11B2 (ENSPPYG00000034934) #33 ENSPPYG00000040595 ATP6V0D1 (ENSPPYG00000007458) #34 AGRP (ENSPPYG00000007459) #35 CTCF (ENSPPYG00000007461) #37 CARMIL2 (ENSPPYG00000007462) Gibbon MODERN SPECIES 11 CA7 (ENSNLEG00000030802) CDH16 (ENSNLEG00000004109) #8 RRAD (ENSNLEG00000004167) #9 CIAO2B (ENSNLEG00000004172) #10 ENSNLEG00000004181 #11 CES2 (ENSNLEG00000030391) #11 CES3 (ENSNLEG00000004206) ENSNLEG00000004228 #12 CBFB (ENSNLEG00000004277) #13 PHAF1 (ENSNLEG00000004306) #14 TRADD (ENSNLEG00000004328) #16 FBXL8 (ENSNLEG00000004335) #17 HSF4 (ENSNLEG00000004338) #18 MATCAP1 (ENSNLEG00000004356) #20 EXOC3L1 (ENSNLEG00000004364) #21 E2F4 (ENSNLEG00000004342) #22 ELMO3 (ENSNLEG00000004393) #23 ENSNLEG00000004435 #24 ENSNLEG00000031742 #25 ENSNLEG00000031407 #26 ENSNLEG00000004480 #27 PLEKHG4 (ENSNLEG00000004488) #28 KCTD19 (ENSNLEG00000004620) #29 ENSNLEG00000035657 #30 TPPP3 (ENSNLEG00000004642) #31 ENSNLEG00000004659 #32 ENSNLEG00000004665 HSD11B2 (ENSNLEG00000004600) #33 ATP6V0D1 (ENSNLEG00000004667) #34 AGRP (ENSNLEG00000004727) #35 RIPOR1 (ENSNLEG00000004731) #36 Platyrrhini ANCESTRAL SPECIES 21 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Cebidae ANCESTRAL SPECIES 21 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Cebidae_a ANCESTRAL SPECIES 37 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Bolivian squirrel monkey MODERN SPECIES 125 PDP2 (ENSSBOG00000018774) #7 CDH16 (ENSSBOG00000000059) #8 RRAD (ENSSBOG00000026924) #9 ENSSBOG00000034849 #10 CES2 (ENSSBOG00000023519) #11 CES3 (ENSSBOG00000034389) CES4A (ENSSBOG00000026647) #12 CBFB (ENSSBOG00000033643) #13 PHAF1 (ENSSBOG00000029225) #14 TRADD (ENSSBOG00000030892) #16 FBXL8 (ENSSBOG00000027852) #17 HSF4 (ENSSBOG00000032426) #18 ENSSBOG00000034224 #19 MATCAP1 (ENSSBOG00000022034) #20 EXOC3L1 (ENSSBOG00000021491) #21 E2F4 (ENSSBOG00000028854) #22 ELMO3 (ENSSBOG00000020441) #23 ENSSBOG00000017407 #24 TMEM208 (ENSSBOG00000029141) #25 FHOD1 (ENSSBOG00000029348) #26 SLC9A5 (ENSSBOG00000033771) #27 PLEKHG4 (ENSSBOG00000019498) #28 KCTD19 (ENSSBOG00000035579) #29 LRRC36 (ENSSBOG00000018750) #30 TPPP3 (ENSSBOG00000027473) #31 ZDHHC1 (ENSSBOG00000024750) #32 HSD11B2 (ENSSBOG00000020734) #33 ATP6V0D1 (ENSSBOG00000023987) #34 AGRP (ENSSBOG00000028971) #35 RIPOR1 (ENSSBOG00000019007) #36 CTCF (ENSSBOG00000030958) #37 Capuchin MODERN SPECIES 118 PDP2 (ENSCCAG00000008632) #7 CDH16 (ENSCCAG00000028654) #8 RRAD (ENSCCAG00000035598) #9 CIAO2B (ENSCCAG00000037204) #10 CES2 (ENSCCAG00000037058) #11 CES4A (ENSCCAG00000035376) #12 CES3 (ENSCCAG00000019551) CBFB (ENSCCAG00000036199) #13 ENSCCAG00000008806 #14 TRADD (ENSCCAG00000025054) #16 FBXL8 (ENSCCAG00000032746) #17 HSF4 (ENSCCAG00000018787) #18 NOL3 (ENSCCAG00000024743) #19 KIAA0895L (ENSCCAG00000028132) #20 EXOC3L1 (ENSCCAG00000030759) #21 E2F4 (ENSCCAG00000003067) #22 ELMO3 (ENSCCAG00000027018) #23 ENSCCAG00000022766 #24 TMEM208 (ENSCCAG00000033775) #25 FHOD1 (ENSCCAG00000033277) #26 SLC9A5 (ENSCCAG00000023939) #27 PLEKHG4 (ENSCCAG00000026268) #28 KCTD19 (ENSCCAG00000037027) #29 LRRC36 (ENSCCAG00000032482) #30 TPPP3 (ENSCCAG00000026155) #31 ZDHHC1 (ENSCCAG00000024396) #32 HSD11B2 (ENSCCAG00000032222) #33 ATP6V0D1 (ENSCCAG00000033213) #34 AGRP (ENSCCAG00000026443) #35 ENSCCAG00000024362 RIPOR1 (ENSCCAG00000029187) #36 Marmoset MODERN SPECIES 12 CDH16 (ENSCJAG00000016616) #8 RRAD (ENSCJAG00000016611) #9 CIAO2B (ENSCJAG00000016595) #10 CES2 (ENSCJAG00000038169) #11 CES3 (ENSCJAG00000016564) CES4A (ENSCJAG00000016544) #12 CBFB (ENSCJAG00000046152) #13 PHAF1 (ENSCJAG00000016510) #14 B3GNT9 (ENSCJAG00000041278) #15 TRADD (ENSCJAG00000016502) #16 FBXL8 (ENSCJAG00000016495) #17 HSF4 (ENSCJAG00000016481) #18 ENSCJAG00000016465 #19 MATCAP1 (ENSCJAG00000039578) #20 EXOC3L1 (ENSCJAG00000016422) #21 E2F4 (ENSCJAG00000016403) #22 ELMO3 (ENSCJAG00000016361) #23 ENSCJAG00000016352 #24 TMEM208 (ENSCJAG00000016332) #25 SLC9A5 (ENSCJAG00000016263) #27 PLEKHG4 (ENSCJAG00000016239) #28 KCTD19 (ENSCJAG00000016220) #29 LRRC36 (ENSCJAG00000016213) #30 TPPP3 (ENSCJAG00000042043) #31 ZDHHC1 (ENSCJAG00000016204) #32 HSD11B2 (ENSCJAG00000016198) #33 ATP6V0D1 (ENSCJAG00000016190) #34 AGRP (ENSCJAG00000016184) #35 RIPOR1 (ENSCJAG00000016148) #36 CTCF (ENSCJAG00000016139) #37 CARMIL2 (ENSCJAG00000016125) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1135 PDP2 (ENSANAG00000019612) #7 CDH16 (ENSANAG00000030845) #8 RRAD (ENSANAG00000030145) #9 CIAO2B (ENSANAG00000037535) #10 CES2 (ENSANAG00000038137) #11 CES3 (ENSANAG00000022725) CES4A (ENSANAG00000037870) #12 CBFB (ENSANAG00000019257) #13 PHAF1 (ENSANAG00000037262) #14 TRADD (ENSANAG00000038062) #16 FBXL8 (ENSANAG00000005327) #17 HSF4 (ENSANAG00000023015) #18 ENSANAG00000028129 #19 MATCAP1 (ENSANAG00000028721) #20 EXOC3L1 (ENSANAG00000035083) #21 ENSANAG00000032362 #22 ELMO3 (ENSANAG00000034358) #23 ENSANAG00000034545 #24 TMEM208 (ENSANAG00000020556) #25 FHOD1 (ENSANAG00000025694) #26 SLC9A5 (ENSANAG00000035387) #27 PLEKHG4 (ENSANAG00000036092) #28 KCTD19 (ENSANAG00000021622) #29 LRRC36 (ENSANAG00000038452) #30 TPPP3 (ENSANAG00000024244) #31 ZDHHC1 (ENSANAG00000028213) #32 HSD11B2 (ENSANAG00000031199) #33 ATP6V0D1 (ENSANAG00000024349) #34 AGRP (ENSANAG00000025594) #35 RIPOR1 (ENSANAG00000035037) #36 CTCF (ENSANAG00000027330) #37 Mas night monkey MODERN SPECIES 1333 NFE2L2 (ENSANAG00000023669) HNRNPA3 (ENSANAG00000002931) MTX2 (ENSANAG00000022501) ENSANAG00000031061 HOXD1 (ENSANAG00000019775) HOXD3 (ENSANAG00000026428) HOXD4 (ENSANAG00000028028) HOXD8 (ENSANAG00000026980) HOXD9 (ENSANAG00000024699) HOXD10 (ENSANAG00000025381) HOXD11 (ENSANAG00000029678) HOXD12 (ENSANAG00000008919) HOXD13 (ENSANAG00000029500) EVX2 (ENSANAG00000031929) LNPK (ENSANAG00000019161) ENSANAG00000021797 #22 ENSANAG00000023367 ENSANAG00000033889 ENSANAG00000037338 ENSANAG00000011341 Tarsier DUPLICATION Tarsier MODERN SPECIES 1381 ENSTSYG00000009039 #13 CUNH16orf70 (ENSTSYG00000005441) #14 TRADD (ENSTSYG00000035881) #16 FBXL8 (ENSTSYG00000035544) #17 HSF4 (ENSTSYG00000030908) #18 ENSTSYG00000027378 #19 KIAA0895L (ENSTSYG00000014556) #20 EXOC3L1 (ENSTSYG00000034147) #21 ENSTSYG00000007645 #22 ELMO3 (ENSTSYG00000028878) #23 ENSTSYG00000005501 #24 TMEM208 (ENSTSYG00000031480) #25 FHOD1 (ENSTSYG00000026352) #26 SLC9A5 (ENSTSYG00000013838) #27 PLEKHG4 (ENSTSYG00000001169) #28 KCTD19 (ENSTSYG00000005449) #29 LRRC36 (ENSTSYG00000005473) #30 TPPP3 (ENSTSYG00000028006) #31 ZDHHC1 (ENSTSYG00000035954) #32 HSD11B2 (ENSTSYG00000026090) #33 ATP6V0D1 (ENSTSYG00000025917) #34 Tarsier MODERN SPECIES 3941 MGAT1 (ENSTSYG00000005566) ENSTSYG00000030171 #22 Strepsirrhini ANCESTRAL SPECIES 17 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000155200 ENSGT00940000153793 #11 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Lemuriformes ANCESTRAL SPECIES 31 ENSGT00940000157187 ENSGT00940000156131.a.b ENSGT00550000075019 ENSGT00740000117161 ENSGT00940000153793 #11 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Lemuriformes_a ANCESTRAL SPECIES 29 ENSGT00940000157499 ENSGT00940000157187 ENSGT00940000156131.a.b ENSGT00550000075019 ENSGT00940000161738 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Greater bamboo lemur MODERN SPECIES 1053 ENSPSMG00000009323 #12 CBFB (ENSPSMG00000009337) #13 PHAF1 (ENSPSMG00000009359) #14 B3GNT9 (ENSPSMG00000009364) #15 TRADD (ENSPSMG00000009370) #16 FBXL8 (ENSPSMG00000009377) #17 HSF4 (ENSPSMG00000009399) #18 ENSPSMG00000009414 #19 MATCAP1 (ENSPSMG00000009424) #20 EXOC3L1 (ENSPSMG00000009428) #21 E2F4 (ENSPSMG00000009487) #22 ELMO3 (ENSPSMG00000009500) #23 ENSPSMG00000009507 #24 ENSPSMG00000009512 TMEM208 (ENSPSMG00000009537) #25 ENSPSMG00000009572 #26 ENSPSMG00000009579 #26 SLC9A5 (ENSPSMG00000009595) #27 PLEKHG4 (ENSPSMG00000009668) #28 KCTD19 (ENSPSMG00000009687) #29 LRRC36 (ENSPSMG00000009720) #30 TPPP3 (ENSPSMG00000009738) #31 ZDHHC1 (ENSPSMG00000009762) #32 HSD11B2 (ENSPSMG00000009769) #33 ATP6V0D1 (ENSPSMG00000009814) #34 AGRP (ENSPSMG00000009841) #35 Coquerels sifaka MODERN SPECIES 821 ENSPCOG00000019347 PLA2G15 (ENSPCOG00000027623) ESRP2 (ENSPCOG00000022552) NFATC3 (ENSPCOG00000005362) DUS2 (ENSPCOG00000026045) DDX28 (ENSPCOG00000024632) CES4A (ENSPCOG00000023869) #12 CBFB (ENSPCOG00000024867) #13 PHAF1 (ENSPCOG00000015039) #14 TRADD (ENSPCOG00000020163) #16 FBXL8 (ENSPCOG00000026268) #17 HSF4 (ENSPCOG00000026876) #18 ENSPCOG00000006951 #19 MATCAP1 (ENSPCOG00000022553) #20 EXOC3L1 (ENSPCOG00000027783) #21 E2F4 (ENSPCOG00000020034) #22 ELMO3 (ENSPCOG00000026658) #23 ENSPCOG00000014126 #24 TMEM208 (ENSPCOG00000026225) #25 FHOD1 (ENSPCOG00000002886) #26 SLC9A5 (ENSPCOG00000028144) #27 PLEKHG4 (ENSPCOG00000018644) #28 KCTD19 (ENSPCOG00000016170) #29 ENSPCOG00000017976 #30 TPPP3 (ENSPCOG00000016301) #31 ZDHHC1 (ENSPCOG00000024962) #32 HSD11B2 (ENSPCOG00000025233) #33 ATP6V0D1 (ENSPCOG00000012981) #34 AGRP (ENSPCOG00000020567) #35 RIPOR1 (ENSPCOG00000023759) #36 CTCF (ENSPCOG00000026050) #37 Mouse lemur MODERN SPECIES 12 NFATC3 (ENSMICG00000011371) ENSMICG00000030045 DUS2 (ENSMICG00000011354) DPEP2NB (ENSMICG00000033015) CES2 (ENSMICG00000028404) #11 ENSMICG00000028840 CES4A (ENSMICG00000030422) #12 CBFB (ENSMICG00000028380) #13 PHAF1 (ENSMICG00000043907) #14 TRADD (ENSMICG00000007708) #16 FBXL8 (ENSMICG00000042011) #17 HSF4 (ENSMICG00000007714) #18 ENSMICG00000043710 #19 MATCAP1 (ENSMICG00000035308) #20 EXOC3L1 (ENSMICG00000007737) #21 E2F4 (ENSMICG00000007744) #22 ELMO3 (ENSMICG00000007753) #23 ENSMICG00000007763 #24 TMEM208 (ENSMICG00000007767) #25 FHOD1 (ENSMICG00000007774) #26 SLC9A5 (ENSMICG00000007789) #27 PLEKHG4 (ENSMICG00000007799) #28 KCTD19 (ENSMICG00000007810) #29 LRRC36 (ENSMICG00000012051) #30 TPPP3 (ENSMICG00000027878) #31 ZDHHC1 (ENSMICG00000012064) #32 HSD11B2 (ENSMICG00000034557) #33 ATP6V0D1 (ENSMICG00000012079) #34 AGRP (ENSMICG00000045134) #35 RIPOR1 (ENSMICG00000012105) #36 CTCF (ENSMICG00000012128) #37 Bushbaby MODERN SPECIES 266 RRAD (ENSOGAG00000014676) #9 CIAO2B (ENSOGAG00000024476) #10 CES3 (ENSOGAG00000004516) CES2 (ENSOGAG00000006597) #11 CES4A (ENSOGAG00000004518) #12 ENSOGAG00000000337 CBFB (ENSOGAG00000004521) #13 PHAF1 (ENSOGAG00000004524) #14 B3GNT9 (ENSOGAG00000024513) #15 TRADD (ENSOGAG00000034457) #16 FBXL8 (ENSOGAG00000030725) #17 HSF4 (ENSOGAG00000001391) #18 ENSOGAG00000033380 #19 MATCAP1 (ENSOGAG00000000008) #20 EXOC3L1 (ENSOGAG00000000009) #21 E2F4 (ENSOGAG00000000010) #22 ELMO3 (ENSOGAG00000000011) #23 ENSOGAG00000033153 ENSOGAG00000000012 #24 ENSOGAG00000000013 FHOD1 (ENSOGAG00000000014) #26 SLC9A5 (ENSOGAG00000000015) #27 PLEKHG4 (ENSOGAG00000000016) #28 KCTD19 (ENSOGAG00000000017) #29 LRRC36 (ENSOGAG00000000018) #30 TPPP3 (ENSOGAG00000000019) #31 ZDHHC1 (ENSOGAG00000000020) #32 HSD11B2 (ENSOGAG00000028718) #33 ATP6V0D1 (ENSOGAG00000000021) #34 AGRP (ENSOGAG00000034563) #35 RIPOR1 (ENSOGAG00000011861) #36 Euarchontoglires_A ANCESTRAL SPECIES 7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Tree shrew MODERN SPECIES 5263 ENSTBEG00000011108 #22 ELMO3 (ENSTBEG00000011307) #23 SLC9A5 (ENSTBEG00000011764) #27 PLEKHG4 (ENSTBEG00000012009) #28 KCTD19 (ENSTBEG00000012412) #29 Glires ANCESTRAL SPECIES 6 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000164375 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Rodentia ANCESTRAL SPECIES 8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000164375 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00900000143429 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 Rodentia_A ANCESTRAL SPECIES 6 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000164375 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00900000143429 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 Sciuridae ANCESTRAL SPECIES 5 ENSGT00390000017697.b #10 ENSGT00940000153793.l #11 ENSGT00940000153793.k #11 ENSGT00940000164375 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00900000143429 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 8 ENSSVLG00005025467 #11 ENSSVLG00005025347 #11 ENSSVLG00005025098 CES3 (ENSSVLG00005024805) CES4A (ENSSVLG00005024667) #12 ENSSVLG00005024618 CBFB (ENSSVLG00005024570) #13 PHAF1 (ENSSVLG00005024553) #14 B3GNT9 (ENSSVLG00005024534) #15 TRADD (ENSSVLG00005024499) #16 FBXL8 (ENSSVLG00005024480) #17 HSF4 (ENSSVLG00005024450) #18 ENSSVLG00005024414 #19 MATCAP1 (ENSSVLG00005024362) #20 EXOC3L1 (ENSSVLG00005024301) #21 ENSSVLG00005024234 #22 ELMO3 (ENSSVLG00005024014) #23 ENSSVLG00005023967 #24 TMEM208 (ENSSVLG00005023939) #25 SLC9A5 (ENSSVLG00005023832) #27 PLEKHG4 (ENSSVLG00005023652) #28 KCTD19 (ENSSVLG00005023552) #29 LRRC36 (ENSSVLG00005023340) #30 TPPP3 (ENSSVLG00005023292) #31 ZDHHC1 (ENSSVLG00005023237) #32 HSD11B2 (ENSSVLG00005023211) #33 ATP6V0D1 (ENSSVLG00005023162) #34 AGRP (ENSSVLG00005023129) #35 RIPOR1 (ENSSVLG00005023066) #36 CTCF (ENSSVLG00005023014) #37 CARMIL2 (ENSSVLG00005022765) Eurasian red squirrel MODERN SPECIES 1 TM4SF1 (ENSSVLG00005014530) TM4SF4 (ENSSVLG00005014565) IL12A (ENSSVLG00005014635) ENSSVLG00005014764 ENSSVLG00005015250 ENSSVLG00005015377 MFSD1 (ENSSVLG00005015449) RARRES1 (ENSSVLG00005015785) GFM1 (ENSSVLG00005015861) LXN (ENSSVLG00005004800) MLF1 (ENSSVLG00005004886) RSRC1 (ENSSVLG00005005040) SHOX2 (ENSSVLG00005005099) VEPH1 (ENSSVLG00005005203) PTX3 (ENSSVLG00005005353) ENSSVLG00005005378 #22 CCNL1 (ENSSVLG00005005434) LEKR1 (ENSSVLG00005005558) TIPARP (ENSSVLG00005005579) ENSSVLG00005005598 KCNAB1 (ENSSVLG00005005761) ENSSVLG00005006157 GMPS (ENSSVLG00005006221) SLC33A1 (ENSSVLG00005006332) C3orf33 (ENSSVLG00005006407) ENSSVLG00005006455 PLCH1 (ENSSVLG00005006514) STRIT1 (ENSSVLG00005006829) MME (ENSSVLG00005006865) ENSSVLG00005006949 GPR149 (ENSSVLG00005006960) Marmotini ANCESTRAL SPECIES 17 ENSGT00940000153793.l #11 ENSGT00940000153793.k.a.a.b.a #11 ENSGT00940000153793.k.a.a.a.b #11 ENSGT00940000164375.a ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00900000143429 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Marmotini_b ANCESTRAL SPECIES 7 ENSGT00940000153793.k.a.a.a.a.a.a #11 ENSGT00940000153793.k.a.a.b.a #11 ENSGT00940000153793.k.a.a.a.b #11 ENSGT00940000164375.a ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00900000143429 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Arctic ground squirrel MODERN SPECIES 575 ENSUPAG00010002247 CES3 (ENSUPAG00010002231) CES4A (ENSUPAG00010002214) #12 CBFB (ENSUPAG00010002159) #13 PHAF1 (ENSUPAG00010002137) #14 B3GNT9 (ENSUPAG00010002133) #15 TRADD (ENSUPAG00010002125) #16 FBXL8 (ENSUPAG00010002122) #17 HSF4 (ENSUPAG00010001926) #18 ENSUPAG00010001909 #19 MATCAP1 (ENSUPAG00010001869) #20 EXOC3L1 (ENSUPAG00010001853) #21 E2F4 (ENSUPAG00010001834) #22 ELMO3 (ENSUPAG00010001733) #23 ENSUPAG00010001706 #24 TMEM208 (ENSUPAG00010001695) #25 FHOD1 (ENSUPAG00010001636) #26 SLC9A5 (ENSUPAG00010001612) #27 PLEKHG4 (ENSUPAG00010001495) #28 KCTD19 (ENSUPAG00010001430) #29 LRRC36 (ENSUPAG00010001167) #30 TPPP3 (ENSUPAG00010001128) #31 ZDHHC1 (ENSUPAG00010001056) #32 HSD11B2 (ENSUPAG00010001038) #33 ATP6V0D1 (ENSUPAG00010001017) #34 AGRP (ENSUPAG00010001009) #35 RIPOR1 (ENSUPAG00010000952) #36 CTCF (ENSUPAG00010000926) #37 Squirrel MODERN SPECIES 75 ENSSTOG00000022937 #11 ENSSTOG00000027386 #11 ENSSTOG00000026289 #11 ENSSTOG00000025164 CES3 (ENSSTOG00000012032) CES4A (ENSSTOG00000011337) #12 CBFB (ENSSTOG00000011344) #13 PHAF1 (ENSSTOG00000011346) #14 B3GNT9 (ENSSTOG00000028759) #15 TRADD (ENSSTOG00000011360) #16 FBXL8 (ENSSTOG00000026518) #17 HSF4 (ENSSTOG00000027009) #18 ENSSTOG00000022251 #19 MATCAP1 (ENSSTOG00000016431) #20 EXOC3L1 (ENSSTOG00000016432) #21 E2F4 (ENSSTOG00000016434) #22 ELMO3 (ENSSTOG00000026655) #23 ENSSTOG00000022552 #24 TMEM208 (ENSSTOG00000016436) #25 FHOD1 (ENSSTOG00000020262) #26 SLC9A5 (ENSSTOG00000016438) #27 ENSSTOG00000030446 ENSSTOG00000016440 #28 KCTD19 (ENSSTOG00000016442) #29 LRRC36 (ENSSTOG00000016443) #30 TPPP3 (ENSSTOG00000020378) #31 ZDHHC1 (ENSSTOG00000016445) #32 HSD11B2 (ENSSTOG00000016446) #33 ATP6V0D1 (ENSSTOG00000016447) #34 AGRP (ENSSTOG00000016448) #35 RIPOR1 (ENSSTOG00000025539) #36 Alpin marmot MODERN SPECIES 43 ENSMMMG00000001034 #11 ENSMMMG00000000825 #11 ENSMMMG00000000634 CES3 (ENSMMMG00000000606) CES4A (ENSMMMG00000000581) #12 CBFB (ENSMMMG00000000573) #13 PHAF1 (ENSMMMG00000000540) #14 B3GNT9 (ENSMMMG00000000534) #15 TRADD (ENSMMMG00000000522) #16 FBXL8 (ENSMMMG00000000509) #17 HSF4 (ENSMMMG00000000300) #18 ENSMMMG00000000263 #19 MATCAP1 (ENSMMMG00000000193) #20 EXOC3L1 (ENSMMMG00000000159) #21 E2F4 (ENSMMMG00000000134) #22 ELMO3 (ENSMMMG00000000043) #23 ENSMMMG00000000022 #24 TMEM208 (ENSMMMG00000015906) #25 FHOD1 (ENSMMMG00000015324) #26 SLC9A5 (ENSMMMG00000015303) #27 PLEKHG4 (ENSMMMG00000015239) #28 KCTD19 (ENSMMMG00000015200) #29 LRRC36 (ENSMMMG00000015167) #30 TPPP3 (ENSMMMG00000015157) #31 ZDHHC1 (ENSMMMG00000015133) #32 HSD11B2 (ENSMMMG00000015122) #33 ATP6V0D1 (ENSMMMG00000015116) #34 AGRP (ENSMMMG00000015111) #35 RIPOR1 (ENSMMMG00000015092) #36 ENSMMMG00000015080 #37 Hystricomorpha ANCESTRAL SPECIES 22 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.i.a #11 ENSGT00940000153793.j.a #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Naked mole-rat female MODERN SPECIES 26 ENSHGLG00000042496 #11 ENSHGLG00000042617 ENSHGLG00000016814 #11 ENSHGLG00000012610 CES4A (ENSHGLG00000033432) #12 CBFB (ENSHGLG00000050469) #13 ENSHGLG00000046177 ENSHGLG00000016123 #14 ENSHGLG00000009942 B3GNT9 (ENSHGLG00000035794) #15 FBXL8 (ENSHGLG00000019079) #17 HSF4 (ENSHGLG00000014438) #18 ENSHGLG00000037771 #19 MATCAP1 (ENSHGLG00000011035) #20 EXOC3L1 (ENSHGLG00000010315) #21 E2F4 (ENSHGLG00000014276) #22 ELMO3 (ENSHGLG00000014154) #23 ENSHGLG00000019291 #24 ENSHGLG00000014519 TMEM208 (ENSHGLG00000015097) #25 FHOD1 (ENSHGLG00000012638) #26 SLC9A5 (ENSHGLG00000012224) #27 PLEKHG4 (ENSHGLG00000010252) #28 KCTD19 (ENSHGLG00000012309) #29 LRRC36 (ENSHGLG00000013489) #30 TPPP3 (ENSHGLG00000011640) #31 ZDHHC1 (ENSHGLG00000012449) #32 HSD11B2 (ENSHGLG00000012026) #33 ATP6V0D1 (ENSHGLG00000011430) #34 AGRP (ENSHGLG00000010211) #35 RIPOR1 (ENSHGLG00000012465) #36 Hystricomorpha_a ANCESTRAL SPECIES 22 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.i.a #11 ENSGT00940000153793.j.a #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Guinea pig MODERN SPECIES 22 ENSCPOG00000034407 #11 ENSCPOG00000005610 #11 ENSCPOG00000034227 ENSCPOG00000039038 #11 CES3 (ENSCPOG00000033893) CES4A (ENSCPOG00000005603) #12 ENSCPOG00000010825 #13 PHAF1 (ENSCPOG00000010828) #14 B3GNT9 (ENSCPOG00000026402) #15 TRADD (ENSCPOG00000010831) #16 FBXL8 (ENSCPOG00000010832) #17 HSF4 (ENSCPOG00000010834) #18 ENSCPOG00000004946 #19 MATCAP1 (ENSCPOG00000037427) #20 EXOC3L1 (ENSCPOG00000010839) #21 E2F4 (ENSCPOG00000010845) #22 ELMO3 (ENSCPOG00000010852) #23 ENSCPOG00000025275 #24 TMEM208 (ENSCPOG00000010856) #25 FHOD1 (ENSCPOG00000010858) #26 SLC9A5 (ENSCPOG00000010865) #27 PLEKHG4 (ENSCPOG00000024564) #28 KCTD19 (ENSCPOG00000010870) #29 LRRC36 (ENSCPOG00000010878) #30 TPPP3 (ENSCPOG00000010883) #31 ZDHHC1 (ENSCPOG00000040494) #32 HSD11B2 (ENSCPOG00000010894) #33 ATP6V0D1 (ENSCPOG00000010904) #34 AGRP (ENSCPOG00000010909) #35 RIPOR1 (ENSCPOG00000004238) #36 CTCF (ENSCPOG00000010698) #37 Hystricomorpha_b ANCESTRAL SPECIES 15 ENSGT00940000153793.i.a #11 ENSGT00940000153793.i.b.c #11 ENSGT00940000164375 ENSGT00940000153793.j.a #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Long-tailed chinchilla MODERN SPECIES 191 ENSCLAG00000004810 ENSCLAG00000004482 #11 ENSCLAG00000004579 #11 CES3 (ENSCLAG00000003979) CES4A (ENSCLAG00000003809) #12 CBFB (ENSCLAG00000003276) #13 PHAF1 (ENSCLAG00000011848) #14 TRADD (ENSCLAG00000013206) #16 FBXL8 (ENSCLAG00000012818) #17 HSF4 (ENSCLAG00000011421) #18 ENSCLAG00000010849 #19 MATCAP1 (ENSCLAG00000008743) #20 EXOC3L1 (ENSCLAG00000008542) #21 E2F4 (ENSCLAG00000008447) #22 ELMO3 (ENSCLAG00000009770) #23 ENSCLAG00000009119 #24 TMEM208 (ENSCLAG00000008905) #25 FHOD1 (ENSCLAG00000015436) #26 SLC9A5 (ENSCLAG00000013034) #27 ENSCLAG00000006869 #28 KCTD19 (ENSCLAG00000005454) #29 LRRC36 (ENSCLAG00000004344) #30 TPPP3 (ENSCLAG00000004256) #31 ZDHHC1 (ENSCLAG00000004092) #32 HSD11B2 (ENSCLAG00000003883) #33 ATP6V0D1 (ENSCLAG00000003151) #34 AGRP (ENSCLAG00000012740) #35 RIPOR1 (ENSCLAG00000016244) #36 ENSCLAG00000008635 Degu MODERN SPECIES 52 ENSODEG00000015554 #11 ENSODEG00000017576 #11 ENSODEG00000016121 ENSODEG00000015656 #11 CES3 (ENSODEG00000016302) CES4A (ENSODEG00000015763) #12 CBFB (ENSODEG00000016515) #13 PHAF1 (ENSODEG00000015277) #14 B3GNT9 (ENSODEG00000015783) #15 TRADD (ENSODEG00000016273) #16 FBXL8 (ENSODEG00000016675) #17 HSF4 (ENSODEG00000016261) #18 ENSODEG00000015937 #19 MATCAP1 (ENSODEG00000017236) #20 EXOC3L1 (ENSODEG00000015825) #21 ENSODEG00000015743 #22 ELMO3 (ENSODEG00000015567) #23 ENSODEG00000015353 #24 TMEM208 (ENSODEG00000015620) #25 FHOD1 (ENSODEG00000015610) #26 SLC9A5 (ENSODEG00000016195) #27 ENSODEG00000015992 #28 ENSODEG00000016452 KCTD19 (ENSODEG00000016312) #29 LRRC36 (ENSODEG00000015398) #30 TPPP3 (ENSODEG00000016027) #31 ZDHHC1 (ENSODEG00000015615) #32 HSD11B2 (ENSODEG00000015795) #33 ATP6V0D1 (ENSODEG00000016167) #34 AGRP (ENSODEG00000015217) #35 ENSODEG00000020348 Rodentia_B ANCESTRAL SPECIES 21 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000164375 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00900000143429 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 Kangaroo rat MODERN SPECIES 337 Nae1 (ENSDORG00000013530) Car7 (ENSDORG00000013532) Pdp2 (ENSDORG00000024268) #7 Rrad (ENSDORG00000013540) #9 ENSDORG00000013543 #10 ENSDORG00000029390 Cbfb (ENSDORG00000029036) #13 Phaf1 (ENSDORG00000015125) #14 B3gnt9 (ENSDORG00000030078) #15 Tradd (ENSDORG00000015126) #16 Fbxl8 (ENSDORG00000015127) #17 Hsf4 (ENSDORG00000015128) #18 Nol3 (ENSDORG00000026944) #19 Matcap1 (ENSDORG00000015129) #20 Exoc3l (ENSDORG00000015130) #21 ENSDORG00000015131 #22 Elmo3 (ENSDORG00000015132) #23 Fbxl9 (ENSDORG00000015136) #24 Tmem208 (ENSDORG00000013263) #25 Fhod1 (ENSDORG00000013253) #26 Slc9a5 (ENSDORG00000005859) #27 ENSDORG00000005865 #28 Kctd19 (ENSDORG00000005868) #29 Lrrc36 (ENSDORG00000005869) #30 Tppp3 (ENSDORG00000005871) #31 Zdhhc1 (ENSDORG00000003276) #32 Hsd11b2 (ENSDORG00000013965) #33 Atp6v0d1 (ENSDORG00000013966) #34 Agrp (ENSDORG00000013972) #35 Ripor1 (ENSDORG00000014643) #36 Ctcf (ENSDORG00000000111) #37 Myomorpha ANCESTRAL SPECIES 22 ENSGT00390000017697.b #10 ENSGT00940000153793.g #11 ENSGT00940000153793.h #11 ENSGT00940000164375 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00900000143429 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 Muroidea ANCESTRAL SPECIES 19 ENSGT00390000017697.b #10 ENSGT00940000153793.g #11 ENSGT00940000164375 ENSGT00940000153793.h #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Upper Galilee mountains blind mole rat MODERN SPECIES 1060 ENSNGAG00000015448 #11 ENSNGAG00000013659 #11 Ces2h (ENSNGAG00000001203) ENSNGAG00000001031 Ces4a (ENSNGAG00000015115) #12 Cbfb (ENSNGAG00000009578) #13 Phaf1 (ENSNGAG00000000365) #14 B3gnt9 (ENSNGAG00000015451) #15 Tradd (ENSNGAG00000014423) #16 Fbxl8 (ENSNGAG00000014216) #17 Hsf4 (ENSNGAG00000014341) #18 Nol3 (ENSNGAG00000010053) #19 Matcap1 (ENSNGAG00000008649) #20 Exoc3l (ENSNGAG00000011128) #21 ENSNGAG00000009573 #22 Elmo3 (ENSNGAG00000006509) #23 ENSNGAG00000019899 #24 Tmem208 (ENSNGAG00000012064) #25 Fhod1 (ENSNGAG00000011675) #26 Slc9a5 (ENSNGAG00000011230) #27 Plekhg4 (ENSNGAG00000013487) #28 Kctd19 (ENSNGAG00000017054) #29 Lrrc36 (ENSNGAG00000020479) #30 Tppp3 (ENSNGAG00000019748) #31 Zdhhc1 (ENSNGAG00000017132) #32 Hsd11b2 (ENSNGAG00000013345) #33 Atp6v0d1 (ENSNGAG00000013880) #34 Agrp (ENSNGAG00000011732) #35 Ripor1 (ENSNGAG00000012186) #36 Ctcf (ENSNGAG00000006559) #37 Muroidea_A ANCESTRAL SPECIES 16 ENSGT00940000153793.h.c.a.b.a #11 ENSGT00940000153793.h.c.a.b.b #11 ENSGT00940000153793.h.c.a.a.a #11 ENSGT00940000164375 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Murinae ANCESTRAL SPECIES 15 ENSGT00940000153793.h.c.a.b.a #11 ENSGT00940000153793.h.c.a.b.b #11 ENSGT00940000153793.h.c.a.a.a.b #11 ENSGT00940000164375 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Mus ANCESTRAL SPECIES 6 ENSGT00940000153793.h.c.a.b.a #11 ENSGT00940000153793.h.c.a.b.b #11 ENSGT00940000153793.h.c.a.a.a.b #11 ENSGT00940000164375 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Mus_A ANCESTRAL SPECIES 8 ENSGT00940000153793.h.c.a.b.a #11 ENSGT00940000153793.h.c.a.b.b #11 ENSGT00940000153793.h.c.a.a.a.b #11 ENSGT00940000164375 ENSGT00940000155200.m.b ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Mus_B ANCESTRAL SPECIES 6 ENSGT00940000153793.h.c.a.b.a #11 ENSGT00940000153793.h.c.a.b.b #11 ENSGT00940000153793.h.c.a.a.a.b #11 ENSGT00940000164375 ENSGT00940000155200.m.b ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Mouse MODERN SPECIES 17 Ces2f (ENSMUSG00000062826) #11 Ces2g (ENSMUSG00000031877) #11 Ces2h (ENSMUSG00000091813) Ces3a (ENSMUSG00000069922) Ces3b (ENSMUSG00000062181) Ces4a (ENSMUSG00000060560) #12 Cbfb (ENSMUSG00000031885) #13 Phaf1 (ENSMUSG00000031889) #14 B3gnt9 (ENSMUSG00000069920) #15 Tradd (ENSMUSG00000031887) #16 Fbxl8 (ENSMUSG00000033313) #17 Hsf4 (ENSMUSG00000033249) #18 Nol3 (ENSMUSG00000014776) #19 Matcap1 (ENSMUSG00000014837) #20 Exoc3l (ENSMUSG00000043251) #21 E2f4 (ENSMUSG00000014859) #22 Elmo3 (ENSMUSG00000014791) #23 Fbxl9 (ENSMUSG00000041679) #24 Tmem208 (ENSMUSG00000014856) #25 Fhod1 (ENSMUSG00000014778) #26 Slc9a5 (ENSMUSG00000014786) #27 Plekhg4 (ENSMUSG00000014782) #28 Kctd19 (ENSMUSG00000051648) #29 Lrrc36 (ENSMUSG00000054320) #30 Tppp3 (ENSMUSG00000014846) #31 Zdhhc1 (ENSMUSG00000039199) #32 Hsd11b2 (ENSMUSG00000031891) #33 Atp6v0d1 (ENSMUSG00000013160) #34 Agrp (ENSMUSG00000005705) #35 Ripor1 (ENSMUSG00000038604) #36 Ctcf (ENSMUSG00000005698) #37 Mus_C ANCESTRAL SPECIES 5 ENSGT00940000153793.h.c.a.b.a #11 ENSGT00940000153793.h.c.a.b.b #11 ENSGT00940000153793.h.c.a.a.a.b #11 ENSGT00940000164375 ENSGT00940000155200.m.b ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Steppe mouse MODERN SPECIES 2682 Ces4a (ENSMSIG00000013129) #12 Cbfb (ENSMSIG00000013151) #13 Phaf1 (ENSMSIG00000013286) #14 B3gnt9 (ENSMSIG00000013307) #15 Tradd (ENSMSIG00000013313) #16 Fbxl8 (ENSMSIG00000013320) #17 Hsf4 (ENSMSIG00000013332) #18 Nol3 (ENSMSIG00000014052) #19 Matcap1 (ENSMSIG00000014061) #20 Exoc3l (ENSMSIG00000014129) #21 E2f4 (ENSMSIG00000014157) #22 Elmo3 (ENSMSIG00000014196) #23 Fbxl9 (ENSMSIG00000014362) #24 ENSMSIG00000014410 #25 Fhod1 (ENSMSIG00000014442) #26 Slc9a5 (ENSMSIG00000015767) #27 Plekhg4 (ENSMSIG00000015844) #28 Kctd19 (ENSMSIG00000016043) #29 Lrrc36 (ENSMSIG00000016086) #30 Tppp3 (ENSMSIG00000016207) #31 Zdhhc1 (ENSMSIG00000016223) #32 Hsd11b2 (ENSMSIG00000016242) #33 Atp6v0d1 (ENSMSIG00000016254) #34 Ripor1 (ENSMSIG00000016315) #36 Agrp (ENSMSIG00000016436) #35 Ctcf (ENSMSIG00000016451) #37 spretus MODERN SPECIES 17 Ces2f (MGP_SPRETEiJ_G0032576) #11 Ces2g (MGP_SPRETEiJ_G0032577) #11 Ces2h (MGP_SPRETEiJ_G0032578) MGP_SPRETEiJ_G0032579 MGP_SPRETEiJ_G0032580 Ces4a (MGP_SPRETEiJ_G0032581) #12 Cbfb (MGP_SPRETEiJ_G0032582) #13 Phaf1 (MGP_SPRETEiJ_G0032583) #14 B3gnt9 (MGP_SPRETEiJ_G0032584) #15 Tradd (MGP_SPRETEiJ_G0032585) #16 Fbxl8 (MGP_SPRETEiJ_G0032586) #17 Hsf4 (MGP_SPRETEiJ_G0032587) #18 Nol3 (MGP_SPRETEiJ_G0032588) #19 Matcap1 (MGP_SPRETEiJ_G0032589) #20 Exoc3l (MGP_SPRETEiJ_G0032590) #21 E2f4 (MGP_SPRETEiJ_G0032591) #22 Elmo3 (MGP_SPRETEiJ_G0032592) #23 MGP_SPRETEiJ_G0032593 #24 Tmem208 (MGP_SPRETEiJ_G0032594) #25 MGP_SPRETEiJ_G0032595 #26 Slc9a5 (MGP_SPRETEiJ_G0032596) #27 Plekhg4 (MGP_SPRETEiJ_G0032597) #28 Kctd19 (MGP_SPRETEiJ_G0032598) #29 Lrrc36 (MGP_SPRETEiJ_G0032599) #30 Tppp3 (MGP_SPRETEiJ_G0032600) #31 Zdhhc1 (MGP_SPRETEiJ_G0032601) #32 Hsd11b2 (MGP_SPRETEiJ_G0032602) #33 Atp6v0d1 (MGP_SPRETEiJ_G0032603) #34 Agrp (MGP_SPRETEiJ_G0032604) #35 Ripor1 (MGP_SPRETEiJ_G0032605) #36 Ctcf (MGP_SPRETEiJ_G0032606) #37 Ryukyu mouse MODERN SPECIES 17 Ces2f (MGP_CAROLIEiJ_G0031458) #11 Ces2g (MGP_CAROLIEiJ_G0031459) #11 MGP_CAROLIEiJ_G0031460 #11 Ces2h (MGP_CAROLIEiJ_G0031461) MGP_CAROLIEiJ_G0031462 Ces4a (MGP_CAROLIEiJ_G0031463) #12 Cbfb (MGP_CAROLIEiJ_G0031464) #13 Phaf1 (MGP_CAROLIEiJ_G0031465) #14 B3gnt9 (MGP_CAROLIEiJ_G0031466) #15 Tradd (MGP_CAROLIEiJ_G0031467) #16 Fbxl8 (MGP_CAROLIEiJ_G0031468) #17 Hsf4 (MGP_CAROLIEiJ_G0031469) #18 Nol3 (MGP_CAROLIEiJ_G0031470) #19 Matcap1 (MGP_CAROLIEiJ_G0031471) #20 Exoc3l (MGP_CAROLIEiJ_G0031472) #21 E2f4 (MGP_CAROLIEiJ_G0031473) #22 Elmo3 (MGP_CAROLIEiJ_G0031474) #23 MGP_CAROLIEiJ_G0031475 #24 Tmem208 (MGP_CAROLIEiJ_G0031476) #25 Fhod1 (MGP_CAROLIEiJ_G0031477) #26 Slc9a5 (MGP_CAROLIEiJ_G0031478) #27 Plekhg4 (MGP_CAROLIEiJ_G0031479) #28 Kctd19 (MGP_CAROLIEiJ_G0031480) #29 Lrrc36 (MGP_CAROLIEiJ_G0031481) #30 Tppp3 (MGP_CAROLIEiJ_G0031482) #31 Zdhhc1 (MGP_CAROLIEiJ_G0031483) #32 Hsd11b2 (MGP_CAROLIEiJ_G0031484) #33 Atp6v0d1 (MGP_CAROLIEiJ_G0031485) #34 Agrp (MGP_CAROLIEiJ_G0031486) #35 Ripor1 (MGP_CAROLIEiJ_G0031487) #36 Ctcf (MGP_CAROLIEiJ_G0031488) #37 Shrew mouse MODERN SPECIES 12 Ces2f (MGP_PahariEiJ_G0023058) #11 Ces2g (MGP_PahariEiJ_G0023059) #11 Ces2h (MGP_PahariEiJ_G0023060) MGP_PahariEiJ_G0023061 MGP_PahariEiJ_G0023062 Ces4a (MGP_PahariEiJ_G0023063) #12 Cbfb (MGP_PahariEiJ_G0023064) #13 Phaf1 (MGP_PahariEiJ_G0023065) #14 B3gnt9 (MGP_PahariEiJ_G0023066) #15 Tradd (MGP_PahariEiJ_G0023067) #16 Fbxl8 (MGP_PahariEiJ_G0023068) #17 Hsf4 (MGP_PahariEiJ_G0023069) #18 Nol3 (MGP_PahariEiJ_G0023070) #19 Matcap1 (MGP_PahariEiJ_G0023071) #20 Exoc3l (MGP_PahariEiJ_G0023072) #21 E2f4 (MGP_PahariEiJ_G0023073) #22 Elmo3 (MGP_PahariEiJ_G0023074) #23 Fbxl9 (MGP_PahariEiJ_G0023075) #24 Tmem208 (MGP_PahariEiJ_G0023076) #25 Fhod1 (MGP_PahariEiJ_G0023077) #26 Slc9a5 (MGP_PahariEiJ_G0023078) #27 Plekhg4 (MGP_PahariEiJ_G0023079) #28 Kctd19 (MGP_PahariEiJ_G0023080) #29 MGP_PahariEiJ_G0023081 #30 Tppp3 (MGP_PahariEiJ_G0023082) #31 Zdhhc1 (MGP_PahariEiJ_G0023083) #32 Hsd11b2 (MGP_PahariEiJ_G0023084) #33 Atp6v0d1 (MGP_PahariEiJ_G0023085) #34 Agrp (MGP_PahariEiJ_G0023086) #35 Ripor1 (MGP_PahariEiJ_G0023087) #36 Ctcf (MGP_PahariEiJ_G0023088) #37 Rat MODERN SPECIES 10 Rps27a-ps6 (ENSRNOG00000029317) ENSRNOG00000070405 Slc25a36l1 (ENSRNOG00000054284) Ces2g (ENSRNOG00000070043) #11 Ces2h (ENSRNOG00000039079) ENSRNOG00000066514 Ces4a (ENSRNOG00000014257) #12 Cbfb (ENSRNOG00000014647) #13 Phaf1 (ENSRNOG00000014668) #14 B3gnt9 (ENSRNOG00000053895) #15 Tradd (ENSRNOG00000015179) #16 Fbxl8 (ENSRNOG00000015242) #17 Hsf4 (ENSRNOG00000015253) #18 Nol3 (ENSRNOG00000015588) #19 Matcap1 (ENSRNOG00000015625) #20 E2f4 (ENSRNOG00000015708) #22 Elmo3 (ENSRNOG00000015800) #23 Lrrc29 (ENSRNOG00000025231) #24 Tmem208 (ENSRNOG00000015974) #25 Fhod1 (ENSRNOG00000054625) #26 Slc9a5 (ENSRNOG00000028844) #27 Plekhg4 (ENSRNOG00000016479) #28 Kctd19 (ENSRNOG00000016760) #29 Lrrc36 (ENSRNOG00000016854) #30 Tppp3 (ENSRNOG00000016890) #31 Zdhhc1 (ENSRNOG00000017045) #32 Hsd11b2 (ENSRNOG00000017084) #33 Atp6v0d1 (ENSRNOG00000017235) #34 Agrp (ENSRNOG00000039001) #35 ENSRNOG00000064062 Ripor1 (ENSRNOG00000017604) #36 Cricetidae ANCESTRAL SPECIES 7 ENSGT00940000153793.h.c.a.b.a #11 ENSGT00940000153793.h.c.a.b.b #11 ENSGT00940000153793.h.c.a.a.a.d #11 ENSGT00940000164375 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Cricetinae ANCESTRAL SPECIES 16 ENSGT00940000153793.h.c.a.b.a #11 ENSGT00940000153793.h.c.a.b.b #11 ENSGT00940000153793.h.c.a.a.a.d #11 ENSGT00940000164375 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Chinese hamster chok1gshd MODERN SPECIES 112 ENSCGRG00001011776 #11 Ces2h (ENSCGRG00001009506) ENSCGRG00001019809 #11 ENSCGRG00001009474 ENSCGRG00001015634 Ces4a (ENSCGRG00001001471) #12 Cbfb (ENSCGRG00001022815) #13 Phaf1 (ENSCGRG00001006064) #14 B3gnt9 (ENSCGRG00001019496) #15 Tradd (ENSCGRG00001011379) #16 Fbxl8 (ENSCGRG00001016684) #17 Hsf4 (ENSCGRG00001010856) #18 Nol3 (ENSCGRG00001016708) #19 Matcap1 (ENSCGRG00001022963) #20 Exoc3l (ENSCGRG00001003705) #21 E2f4 (ENSCGRG00001008394) #22 Elmo3 (ENSCGRG00001001125) #23 Fbxl9 (ENSCGRG00001000209) #24 Tmem208 (ENSCGRG00001009390) #25 Fhod1 (ENSCGRG00001019021) #26 Slc9a5 (ENSCGRG00001000242) #27 Plekhg4 (ENSCGRG00001016429) #28 Kctd19 (ENSCGRG00001024518) #29 Lrrc36 (ENSCGRG00001000114) #30 Tppp3 (ENSCGRG00001012944) #31 Zdhhc1 (ENSCGRG00001006487) #32 Hsd11b2 (ENSCGRG00001022477) #33 Atp6v0d1 (ENSCGRG00001014538) #34 Agrp (ENSCGRG00001016032) #35 Ripor1 (ENSCGRG00001017908) #36 Ctcf (ENSCGRG00001006622) #37 Golden Hamster MODERN SPECIES 677 ENSMAUG00000014101 #11 Ces2e (ENSMAUG00000014921) #11 ENSMAUG00000018177 #11 Ces2h (ENSMAUG00000000063) ENSMAUG00000014836 Ces4a (ENSMAUG00000018020) #12 Cbfb (ENSMAUG00000017365) #13 Phaf1 (ENSMAUG00000000635) #14 B3gnt9 (ENSMAUG00000000090) #15 Tradd (ENSMAUG00000000327) #16 Fbxl8 (ENSMAUG00000018497) #17 Hsf4 (ENSMAUG00000000872) #18 Nol3 (ENSMAUG00000001852) #19 Matcap1 (ENSMAUG00000002709) #20 Exoc3l (ENSMAUG00000000438) #21 ENSMAUG00000001090 #22 ENSMAUG00000003972 Lrrn3 (ENSMAUG00000006396) Dock4 (ENSMAUG00000004565) Zfp277 (ENSMAUG00000009201) ENSMAUG00000012490 Ifrd1 (ENSMAUG00000013118) Lsmem1 (ENSMAUG00000013434) Scin (ENSMAUG00000010111) Arl4a (ENSMAUG00000013648) Etv1 (ENSMAUG00000015439) ENSMAUG00000017823 Dgkb (ENSMAUG00000014209) Agmo (ENSMAUG00000000152) Meox2 (ENSMAUG00000015354) Crppa (ENSMAUG00000014377) Cricetidae_B ANCESTRAL SPECIES 5 ENSGT00940000153793.h.c.a.a.a.c.a #11 ENSGT00940000153793.h.c.a.b.a #11 ENSGT00940000153793.h.c.a.b.b #11 ENSGT00940000164375 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Prairie vole MODERN SPECIES 12 Ciao2b (ENSMOCG00000006278) #10 Ces2a (ENSMOCG00000003082) #11 ENSMOCG00000002668 #11 Ces2h (ENSMOCG00000001262) ENSMOCG00000018149 Ces4a (ENSMOCG00000021744) #12 Cbfb (ENSMOCG00000013533) #13 Phaf1 (ENSMOCG00000008111) #14 B3gnt9 (ENSMOCG00000008518) #15 Tradd (ENSMOCG00000014235) #16 Fbxl8 (ENSMOCG00000005462) #17 Hsf4 (ENSMOCG00000017670) #18 Nol3 (ENSMOCG00000013389) #19 Matcap1 (ENSMOCG00000020057) #20 Exoc3l (ENSMOCG00000017278) #21 E2f4 (ENSMOCG00000006353) #22 Elmo3 (ENSMOCG00000009955) #23 ENSMOCG00000020837 #24 ENSMOCG00000021484 ENSMOCG00000020885 #25 Fhod1 (ENSMOCG00000015100) #26 Slc9a5 (ENSMOCG00000000567) #27 Plekhg4 (ENSMOCG00000021633) #28 Kctd19 (ENSMOCG00000013085) #29 Lrrc36 (ENSMOCG00000001566) #30 Tppp3 (ENSMOCG00000022557) #31 Zdhhc1 (ENSMOCG00000022202) #32 Hsd11b2 (ENSMOCG00000002599) #33 ENSMOCG00000001313 #34 Agrp (ENSMOCG00000008086) #35 Ripor1 (ENSMOCG00000013026) #36 Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000024621 #11 ENSPEMG00000028995 #11 ENSPEMG00000027583 #11 Ces2h (ENSPEMG00000028141) ENSPEMG00000011511 Ces4a (ENSPEMG00000011474) #12 Cbfb (ENSPEMG00000001647) #13 Phaf1 (ENSPEMG00000011386) #14 B3gnt9 (ENSPEMG00000025933) #15 Tradd (ENSPEMG00000009250) #16 Fbxl8 (ENSPEMG00000016420) #17 Hsf4 (ENSPEMG00000008346) #18 Nol3 (ENSPEMG00000003782) #19 Matcap1 (ENSPEMG00000008792) #20 Exoc3l (ENSPEMG00000015025) #21 E2f4 (ENSPEMG00000003342) #22 Elmo3 (ENSPEMG00000009050) #23 Fbxl9 (ENSPEMG00000017442) #24 Tmem208 (ENSPEMG00000011151) #25 Fhod1 (ENSPEMG00000024184) #26 Slc9a5 (ENSPEMG00000000684) #27 Plekhg4 (ENSPEMG00000002713) #28 Kctd19 (ENSPEMG00000012851) #29 Lrrc36 (ENSPEMG00000016059) #30 Tppp3 (ENSPEMG00000016560) #31 Zdhhc1 (ENSPEMG00000014208) #32 Hsd11b2 (ENSPEMG00000014235) #33 Atp6v0d1 (ENSPEMG00000010243) #34 Agrp (ENSPEMG00000026382) #35 Ripor1 (ENSPEMG00000014437) #36 Ctcf (ENSPEMG00000018300) #37 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 67 Gcc1 (ENSJJAG00000000812) Grm8 (ENSJJAG00000016613) ENSJJAG00000010202 Gpr37 (ENSJJAG00000014629) ENSJJAG00000011611 Tmem229a (ENSJJAG00000012347) ENSJJAG00000011717 ENSJJAG00000022467 Hyal4 (ENSJJAG00000020961) Hyal6 (ENSJJAG00000018979) Wasl (ENSJJAG00000010164) Lmod2 (ENSJJAG00000001036) Asb15 (ENSJJAG00000012943) ENSJJAG00000010459 Slc13a1 (ENSJJAG00000022062) ENSJJAG00000010213 #22 Tas2r118 (ENSJJAG00000000517) ENSJJAG00000021889 Rnf148 (ENSJJAG00000020410) Rnf133 (ENSJJAG00000005201) Cadps2 (ENSJJAG00000016732) Fezf1 (ENSJJAG00000014803) Aass (ENSJJAG00000003015) Ptprz1 (ENSJJAG00000014324) ENSJJAG00000018547 ENSJJAG00000020378 Fam3c (ENSJJAG00000019764) Wnt16 (ENSJJAG00000016207) ENSJJAG00000013375 Cped1 (ENSJJAG00000023207) Ing3 (ENSJJAG00000007662) Lesser Egyptian jerboa MODERN SPECIES 85 Lepr (ENSJJAG00000001138) ENSJJAG00000024179 ENSJJAG00000023828 ENSJJAG00000014277 Ak4 (ENSJJAG00000014122) ENSJJAG00000010970 Cbfb (ENSJJAG00000013223) #13 ENSJJAG00000012442 #14 B3gnt9 (ENSJJAG00000023578) #15 Tradd (ENSJJAG00000008375) #16 Fbxl8 (ENSJJAG00000021256) #17 Hsf4 (ENSJJAG00000001368) #18 Nol3 (ENSJJAG00000024314) #19 Matcap1 (ENSJJAG00000012976) #20 Exoc3l (ENSJJAG00000020372) #21 ENSJJAG00000013722 #22 Elmo3 (ENSJJAG00000013057) #23 Fbxl9 (ENSJJAG00000014941) #24 ENSJJAG00000023968 #25 Fhod1 (ENSJJAG00000000338) #26 Slc9a5 (ENSJJAG00000007169) #27 ENSJJAG00000003130 ENSJJAG00000010549 #28 Kctd19 (ENSJJAG00000010989) #29 Lrrc36 (ENSJJAG00000020090) #30 Tppp3 (ENSJJAG00000013386) #31 Zdhhc1 (ENSJJAG00000000584) #32 ENSJJAG00000023733 Hsd11b2 (ENSJJAG00000019696) #33 ENSJJAG00000013926 Atp6v0d1 (ENSJJAG00000019377) #34 Lagomorpha ANCESTRAL SPECIES 19 ENSGT00940000164375.c ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132.j #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Pika MODERN SPECIES 3466 ENSOPRG00000014884 #11 ENSOPRG00000014908 #11 ENSOPRG00000014933 #11 CES3 (ENSOPRG00000014976) ENSOPRG00000018431 #12 CBFB (ENSOPRG00000015006) #13 PHAF1 (ENSOPRG00000015015) #14 TRADD (ENSOPRG00000015048) #16 FBXL8 (ENSOPRG00000015068) #17 HSF4 (ENSOPRG00000015074) #18 ENSOPRG00000015114 #19 MATCAP1 (ENSOPRG00000015125) #20 EXOC3L1 (ENSOPRG00000015144) #21 E2F4 (ENSOPRG00000015165) #22 ELMO3 (ENSOPRG00000015186) #23 Rabbit DUPLICATION Rabbit MODERN SPECIES 14 ENSOCUG00000023452 PAG1 (ENSOCUG00000014767) FABP5 (ENSOCUG00000010425) ENSOCUG00000007445 FABP12 (ENSOCUG00000013189) SNX16 (ENSOCUG00000023666) ENSOCUG00000035758 IMPA1 (ENSOCUG00000014535) CHMP4C (ENSOCUG00000006847) ENSOCUG00000023213 RALYL (ENSOCUG00000025694) ENSOCUG00000032856 ENSOCUG00000024529 ENSOCUG00000026096 LRRCC1 (ENSOCUG00000014653) ENSOCUG00000031215 #22 ENSOCUG00000012890 ENSOCUG00000024948 CA13 (ENSOCUG00000007328) ENSOCUG00000005039 ENSOCUG00000035812 CA3 (ENSOCUG00000011736) CA2 (ENSOCUG00000011742) ATP6V0D2 (ENSOCUG00000010247) ##34 PSKH2 (ENSOCUG00000003992) ENSOCUG00000026370 SLC7A13 (ENSOCUG00000017971) WWP1 (ENSOCUG00000001081) RMDN1 (ENSOCUG00000001086) CPNE3 (ENSOCUG00000017961) CNGB3 (ENSOCUG00000017962) Rabbit DUPLICATION Rabbit MODERN SPECIES 16 ENSOCUG00000025273 #11 ENSOCUG00000025241 #11 ENSOCUG00000024128 #11 ENSOCUG00000017453 #11 ENSOCUG00000034887 #11 CES3 (ENSOCUG00000005152) CES4A (ENSOCUG00000005162) #12 ENSOCUG00000033074 #13 PHAF1 (ENSOCUG00000005173) #14 TRADD (ENSOCUG00000025249) #16 FBXL8 (ENSOCUG00000009996) #17 HSF4 (ENSOCUG00000010001) #18 ENSOCUG00000010013 #19 MATCAP1 (ENSOCUG00000025033) #20 EXOC3L1 (ENSOCUG00000010019) #21 ENSOCUG00000010022 #22 ELMO3 (ENSOCUG00000010030) #23 ENSOCUG00000010035 #24 TMEM208 (ENSOCUG00000026215) #25 FHOD1 (ENSOCUG00000010039) #26 SLC9A5 (ENSOCUG00000010053) #27 PLEKHG4 (ENSOCUG00000010061) #28 KCTD19 (ENSOCUG00000010077) #29 LRRC36 (ENSOCUG00000010080) #30 ENSOCUG00000038328 #31 ZDHHC1 (ENSOCUG00000011825) #32 HSD11B2 (ENSOCUG00000011843) #33 ATP6V0D1 (ENSOCUG00000011850) #34 AGRP (ENSOCUG00000011856) #35 RIPOR1 (ENSOCUG00000008968) #36 CTCF (ENSOCUG00000008983) #37 Rabbit MODERN SPECIES 1338 ENSOCUG00000024747 #22 Laurasiatheria ANCESTRAL SPECIES 5 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Eulipotyphla ANCESTRAL SPECIES 3 ENSGT00940000153528.a.b.a.a #14 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 Hedgehog MODERN SPECIES 8614 E2F4 (ENSEEUG00000014066) #22 ELMO3 (ENSEEUG00000014436) #23 ENSEEUG00000014542 #24 TMEM208 (ENSEEUG00000014664) #25 FHOD1 (ENSEEUG00000003091) #26 SLC9A5 (ENSEEUG00000003251) #27 ENSEEUG00000003436 #28 KCTD19 (ENSEEUG00000003698) #29 Laurasiatheria_a ANCESTRAL SPECIES 5 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Laurasiatheria_b ANCESTRAL SPECIES 5 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Carnivora ANCESTRAL SPECIES 2 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Felidae ANCESTRAL SPECIES 7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Panthera ANCESTRAL SPECIES 10 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Panthera_a ANCESTRAL SPECIES 8 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 leopard MODERN SPECIES 28 CA7 (ENSPPRG00000005536) PDP2 (ENSPPRG00000016536) #7 CDH16 (ENSPPRG00000009161) #8 RRAD (ENSPPRG00000009391) #9 CIAO2B (ENSPPRG00000009809) #10 CES2 (ENSPPRG00000009977) #11 CES3 (ENSPPRG00000010944) CES4A (ENSPPRG00000012641) #12 CBFB (ENSPPRG00000013240) #13 PHAF1 (ENSPPRG00000013795) #14 TRADD (ENSPPRG00000014449) #16 FBXL8 (ENSPPRG00000016650) #17 HSF4 (ENSPPRG00000019220) #18 ENSPPRG00000020293 #19 MATCAP1 (ENSPPRG00000021263) #20 E2F4 (ENSPPRG00000024105) #22 ELMO3 (ENSPPRG00000023242) #23 ENSPPRG00000022970 #24 ENSPPRG00000022903 TMEM208 (ENSPPRG00000000065) #25 SLC9A5 (ENSPPRG00000001927) #27 PLEKHG4 (ENSPPRG00000004387) #28 KCTD19 (ENSPPRG00000005410) #29 LRRC36 (ENSPPRG00000007845) #30 TPPP3 (ENSPPRG00000008182) #31 ZDHHC1 (ENSPPRG00000008488) #32 HSD11B2 (ENSPPRG00000008932) #33 ATP6V0D1 (ENSPPRG00000009684) #34 AGRP (ENSPPRG00000009953) #35 RIPOR1 (ENSPPRG00000013506) #36 CTCF (ENSPPRG00000014317) #37 lion MODERN SPECIES 15 CDH16 (ENSPLOG00000012664) #8 RRAD (ENSPLOG00000013148) #9 CIAO2B (ENSPLOG00000013197) #10 ENSPLOG00000013241 CES3 (ENSPLOG00000013294) CES4A (ENSPLOG00000013533) #12 ENSPLOG00000013982 #13 PHAF1 (ENSPLOG00000014041) #14 B3GNT9 (ENSPLOG00000014082) #15 TRADD (ENSPLOG00000014099) #16 FBXL8 (ENSPLOG00000014173) #17 HSF4 (ENSPLOG00000014216) #18 ENSPLOG00000014452 #19 MATCAP1 (ENSPLOG00000014489) #20 EXOC3L1 (ENSPLOG00000014607) #21 E2F4 (ENSPLOG00000014749) #22 ELMO3 (ENSPLOG00000014820) #23 ENSPLOG00000015357 #24 TMEM208 (ENSPLOG00000015468) #25 FHOD1 (ENSPLOG00000015635) #26 SLC9A5 (ENSPLOG00000015829) #27 PLEKHG4 (ENSPLOG00000016002) #28 KCTD19 (ENSPLOG00000016337) #29 LRRC36 (ENSPLOG00000016474) #30 TPPP3 (ENSPLOG00000016652) #31 ZDHHC1 (ENSPLOG00000016693) #32 HSD11B2 (ENSPLOG00000016794) #33 ATP6V0D1 (ENSPLOG00000016862) #34 AGRP (ENSPLOG00000016913) #35 RIPOR1 (ENSPLOG00000017003) #36 CTCF (ENSPLOG00000017439) #37 Tiger MODERN SPECIES 320 CA7 (ENSPTIG00000019280) PDP2 (ENSPTIG00000006204) #7 CDH16 (ENSPTIG00000019612) #8 RRAD (ENSPTIG00000001809) #9 CIAO2B (ENSPTIG00000003290) #10 CES2 (ENSPTIG00000004063) #11 CES3 (ENSPTIG00000004489) CES4A (ENSPTIG00000005543) #12 ENSPTIG00000006285 #13 PHAF1 (ENSPTIG00000006322) #14 TRADD (ENSPTIG00000007077) #16 FBXL8 (ENSPTIG00000007308) #17 HSF4 (ENSPTIG00000007435) #18 ENSPTIG00000008436 #19 MATCAP1 (ENSPTIG00000008588) #20 E2F4 (ENSPTIG00000009532) #22 ELMO3 (ENSPTIG00000009736) #23 ENSPTIG00000010332 #24 TMEM208 (ENSPTIG00000010543) #25 SLC9A5 (ENSPTIG00000011105) #27 PLEKHG4 (ENSPTIG00000011316) #28 KCTD19 (ENSPTIG00000011820) #29 LRRC36 (ENSPTIG00000011930) #30 TPPP3 (ENSPTIG00000012322) #31 ZDHHC1 (ENSPTIG00000012632) #32 HSD11B2 (ENSPTIG00000013334) #33 ATP6V0D1 (ENSPTIG00000013473) #34 AGRP (ENSPTIG00000013563) #35 CTCF (ENSPTIG00000015459) #37 CARMIL2 (ENSPTIG00000016035) ACD (ENSPTIG00000017755) Cat MODERN SPECIES 246 CDH16 (ENSFCAG00000012774) #8 RRAD (ENSFCAG00000026895) #9 CIAO2B (ENSFCAG00000029216) #10 CES2 (ENSFCAG00000003806) #11 ENSFCAG00000001200 CES4A (ENSFCAG00000003809) #12 CBFB (ENSFCAG00000045823) #13 CE2H16orf70 (ENSFCAG00000009260) #14 B3GNT9 (ENSFCAG00000046265) #15 TRADD (ENSFCAG00000043839) #16 FBXL8 (ENSFCAG00000009263) #17 HSF4 (ENSFCAG00000014099) #18 NOL3 (ENSFCAG00000009264) #19 MATCAP1 (ENSFCAG00000009265) #20 EXOC3L1 (ENSFCAG00000009267) #21 E2F4 (ENSFCAG00000009268) #22 ELMO3 (ENSFCAG00000009269) #23 ENSFCAG00000031746 #24 TMEM208 (ENSFCAG00000024313) #25 FHOD1 (ENSFCAG00000009272) #26 SLC9A5 (ENSFCAG00000028820) #27 PLEKHG4 (ENSFCAG00000009274) #28 KCTD19 (ENSFCAG00000009275) #29 LRRC36 (ENSFCAG00000009276) #30 TPPP3 (ENSFCAG00000009277) #31 ZDHHC1 (ENSFCAG00000018593) #32 HSD11B2 (ENSFCAG00000027537) #33 ATP6V0D1 (ENSFCAG00000003433) #34 AGRP (ENSFCAG00000037497) #35 RIPOR1 (ENSFCAG00000009278) #36 CTCF (ENSFCAG00000003492) #37 Caniformia ANCESTRAL SPECIES 1 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Caniformia_b ANCESTRAL SPECIES 2 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Ursidae ANCESTRAL SPECIES 8 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Ursus ANCESTRAL SPECIES 41 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 American black bear MODERN SPECIES 25 ENSUAMG00000015699 #13 PHAF1 (ENSUAMG00000015701) #14 B3GNT9 (ENSUAMG00000015703) #15 TRADD (ENSUAMG00000015704) #16 ENSUAMG00000015706 FBXL8 (ENSUAMG00000015707) #17 HSF4 (ENSUAMG00000015720) #18 MATCAP1 (ENSUAMG00000015885) #20 ENSUAMG00000015886 #19 EXOC3L1 (ENSUAMG00000015887) #21 E2F4 (ENSUAMG00000015888) #22 ELMO3 (ENSUAMG00000015889) #23 ENSUAMG00000015890 #24 TMEM208 (ENSUAMG00000015892) #25 ENSUAMG00000015894 #26 SLC9A5 (ENSUAMG00000015895) #27 ENSUAMG00000015897 #28 ENSUAMG00000015899 #28 KCTD19 (ENSUAMG00000015905) #29 LRRC36 (ENSUAMG00000015910) #30 TPPP3 (ENSUAMG00000015912) #31 ZDHHC1 (ENSUAMG00000015914) #32 ENSUAMG00000015917 #33 ENSUAMG00000015918 #33 ATP6V0D1 (ENSUAMG00000015919) #34 AGRP (ENSUAMG00000015920) #35 Polar bear MODERN SPECIES 245 NAE1 (ENSUMAG00000020485) CA7 (ENSUMAG00000020388) PDP2 (ENSUMAG00000020386) #7 CDH16 (ENSUMAG00000020327) #8 RRAD (ENSUMAG00000020298) #9 CIAO2B (ENSUMAG00000020292) #10 CES2 (ENSUMAG00000020281) #11 ENSUMAG00000020276 ENSUMAG00000020272 #13 PHAF1 (ENSUMAG00000020258) #14 B3GNT9 (ENSUMAG00000020254) #15 TRADD (ENSUMAG00000020250) #16 HSF4 (ENSUMAG00000020034) #18 MATCAP1 (ENSUMAG00000020005) #20 EXOC3L1 (ENSUMAG00000019991) #21 E2F4 (ENSUMAG00000019980) #22 ELMO3 (ENSUMAG00000019904) #23 ENSUMAG00000019889 #24 TMEM208 (ENSUMAG00000019884) #25 SLC9A5 (ENSUMAG00000019821) #27 ENSUMAG00000019816 #28 ENSUMAG00000019806 #28 KCTD19 (ENSUMAG00000019780) #29 LRRC36 (ENSUMAG00000019753) #30 TPPP3 (ENSUMAG00000019745) #31 ZDHHC1 (ENSUMAG00000019731) #32 HSD11B2 (ENSUMAG00000019726) #33 ATP6V0D1 (ENSUMAG00000019723) #34 AGRP (ENSUMAG00000019719) #35 RIPOR1 (ENSUMAG00000019710) #36 CTCF (ENSUMAG00000019706) #37 Giant Panda MODERN SPECIES 3 PDP2 (ENSAMEG00000019711) #7 CDH16 (ENSAMEG00000017136) #8 RRAD (ENSAMEG00000024334) #9 CIAO2B (ENSAMEG00000025163) #10 CES2 (ENSAMEG00000017174) #11 CES3 (ENSAMEG00000017207) CBFB (ENSAMEG00000031354) #13 PHAF1 (ENSAMEG00000017219) #14 B3GNT9 (ENSAMEG00000026064) #15 TRADD (ENSAMEG00000017232) #16 FBXL8 (ENSAMEG00000017236) #17 HSF4 (ENSAMEG00000017238) #18 ENSAMEG00000017263 #19 MATCAP1 (ENSAMEG00000017266) #20 EXOC3L1 (ENSAMEG00000017273) #21 E2F4 (ENSAMEG00000017275) #22 ELMO3 (ENSAMEG00000017281) #23 ENSAMEG00000017316 #24 TMEM208 (ENSAMEG00000017322) #25 SLC9A5 (ENSAMEG00000017339) #27 PLEKHG4 (ENSAMEG00000017357) #28 KCTD19 (ENSAMEG00000017368) #29 LRRC36 (ENSAMEG00000017372) #30 ZDHHC1 (ENSAMEG00000017379) #32 HSD11B2 (ENSAMEG00000017389) #33 ATP6V0D1 (ENSAMEG00000017393) #34 AGRP (ENSAMEG00000017404) #35 RIPOR1 (ENSAMEG00000017405) #36 CTCF (ENSAMEG00000017438) #37 CARMIL2 (ENSAMEG00000017460) ACD (ENSAMEG00000017492) Mustelinae ANCESTRAL SPECIES 6 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 American mink MODERN SPECIES 2 PDP2 (ENSNVIG00000010937) #7 CDH16 (ENSNVIG00000010820) #8 RRAD (ENSNVIG00000010800) #9 CIAO2B (ENSNVIG00000010786) #10 CES2 (ENSNVIG00000010773) #11 CES3 (ENSNVIG00000010721) CBFB (ENSNVIG00000010680) #13 PHAF1 (ENSNVIG00000010652) #14 B3GNT9 (ENSNVIG00000010650) #15 TRADD (ENSNVIG00000010625) #16 FBXL8 (ENSNVIG00000010608) #17 HSF4 (ENSNVIG00000010576) #18 ENSNVIG00000010569 #19 MATCAP1 (ENSNVIG00000010557) #20 EXOC3L1 (ENSNVIG00000010533) #21 E2F4 (ENSNVIG00000010516) #22 ELMO3 (ENSNVIG00000010475) #23 ENSNVIG00000010464 #24 TMEM208 (ENSNVIG00000010434) #25 FHOD1 (ENSNVIG00000010420) #26 ENSNVIG00000010413 #26 SLC9A5 (ENSNVIG00000010397) #27 PLEKHG4 (ENSNVIG00000010234) #28 KCTD19 (ENSNVIG00000010210) #29 LRRC36 (ENSNVIG00000010163) #30 TPPP3 (ENSNVIG00000010145) #31 ZDHHC1 (ENSNVIG00000010126) #32 HSD11B2 (ENSNVIG00000010109) #33 ATP6V0D1 (ENSNVIG00000010093) #34 AGRP (ENSNVIG00000010084) #35 RIPOR1 (ENSNVIG00000009916) #36 Ferret MODERN SPECIES 174 PDP2 (ENSMPUG00000019891) #7 CDH16 (ENSMPUG00000005284) #8 RRAD (ENSMPUG00000005296) #9 CIAO2B (ENSMPUG00000005303) #10 CES2 (ENSMPUG00000005332) #11 CES3 (ENSMPUG00000005350) CBFB (ENSMPUG00000005362) #13 PHAF1 (ENSMPUG00000005369) #14 B3GNT9 (ENSMPUG00000019893) #15 TRADD (ENSMPUG00000005387) #16 FBXL8 (ENSMPUG00000005412) #17 HSF4 (ENSMPUG00000005418) #18 ENSMPUG00000005530 #19 MATCAP1 (ENSMPUG00000005537) #20 EXOC3L1 (ENSMPUG00000005549) #21 E2F4 (ENSMPUG00000005564) #22 ELMO3 (ENSMPUG00000005677) #23 ENSMPUG00000005910 #24 TMEM208 (ENSMPUG00000005954) #25 FHOD1 (ENSMPUG00000006014) #26 SLC9A5 (ENSMPUG00000006032) #27 PLEKHG4 (ENSMPUG00000006141) #28 KCTD19 (ENSMPUG00000006157) #29 LRRC36 (ENSMPUG00000006211) #30 TPPP3 (ENSMPUG00000006277) #31 ZDHHC1 (ENSMPUG00000006284) #32 HSD11B2 (ENSMPUG00000006293) #33 ATP6V0D1 (ENSMPUG00000006345) #34 AGRP (ENSMPUG00000006360) #35 RIPOR1 (ENSMPUG00000006380) #36 CTCF (ENSMPUG00000006401) #37 Canidae ANCESTRAL SPECIES 11 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000154694.k.a ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Red fox MODERN SPECIES 86 PDP2 (ENSVVUG00000011059) #7 CDH16 (ENSVVUG00000011064) #8 RRAD (ENSVVUG00000011080) #9 CIAO2B (ENSVVUG00000011091) #10 CES2 (ENSVVUG00000011116) #11 ENSVVUG00000011153 ENSVVUG00000011164 #13 PHAF1 (ENSVVUG00000011171) #14 B3GNT9 (ENSVVUG00000011177) #15 TRADD (ENSVVUG00000011183) #16 FBXL8 (ENSVVUG00000011188) #17 HSF4 (ENSVVUG00000011195) #18 ENSVVUG00000011543 #19 MATCAP1 (ENSVVUG00000011547) #20 EXOC3L1 (ENSVVUG00000011555) #21 E2F4 (ENSVVUG00000011569) #22 ELMO3 (ENSVVUG00000011584) #23 ENSVVUG00000011596 #24 TMEM208 (ENSVVUG00000011608) #25 SLC9A5 (ENSVVUG00000011891) #27 PLEKHG4 (ENSVVUG00000011993) #28 KCTD19 (ENSVVUG00000012031) #29 LRRC36 (ENSVVUG00000012071) #30 TPPP3 (ENSVVUG00000012076) #31 ZDHHC1 (ENSVVUG00000012083) #32 HSD11B2 (ENSVVUG00000012093) #33 ATP6V0D1 (ENSVVUG00000012104) #34 AGRP (ENSVVUG00000012120) #35 RIPOR1 (ENSVVUG00000012147) #36 CTCF (ENSVVUG00000012154) #37 CARMIL2 (ENSVVUG00000012192) Canis_lupus ANCESTRAL SPECIES 5 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000154694.k.a ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Dog DUPLICATION Dog MODERN SPECIES 4 ENSCAFG00845009455 ENSCAFG00845009231 ENSCAFG00845009169 YTHDC1 (ENSCAFG00845009010) ENSCAFG00845008866 ENSCAFG00845008806 ENSCAFG00845008764 TMPRSS11A (ENSCAFG00845008712) ENSCAFG00845008657 ENSCAFG00845008566 ENSCAFG00845008485 GNRHR (ENSCAFG00845008435) UBA6 (ENSCAFG00845007757) STAP1 (ENSCAFG00845007408) CENPC (ENSCAFG00845007271) ENSCAFG00845007153 #22 EPHA5 (ENSCAFG00845006153) TECRL (ENSCAFG00845005649) ADGRL3 (ENSCAFG00845014364) ENSCAFG00845014256 ENSCAFG00845014244 ENSCAFG00845014237 ENSCAFG00845014210 ENSCAFG00845014179 POLR2B (ENSCAFG00845014082) NOA1 (ENSCAFG00845013997) REST (ENSCAFG00845013968) SPINK2 (ENSCAFG00845013914) THEGL (ENSCAFG00845013867) ENSCAFG00845013850 ARL9 (ENSCAFG00845013838) Dog MODERN SPECIES 33 PDP2 (ENSCAFG00845011036) #7 CDH16 (ENSCAFG00845010781) #8 RRAD (ENSCAFG00845010705) #9 CIAO2B (ENSCAFG00845010671) #10 CES2 (ENSCAFG00845010523) #11 ENSCAFG00845010462 CBFB (ENSCAFG00845010432) #13 PHAF1 (ENSCAFG00845010359) #14 B3GNT9 (ENSCAFG00845010321) #15 FBXL8 (ENSCAFG00845010281) #17 TRADD (ENSCAFG00845010243) #16 HSF4 (ENSCAFG00845010066) #18 HSF4 (ENSCAFG00845009966) #19 MATCAP1 (ENSCAFG00845009874) #20 EXOC3L1 (ENSCAFG00845009747) #21 ENSCAFG00845009673 #22 ELMO3 (ENSCAFG00845009511) #23 ENSCAFG00845009436 #24 TMEM208 (ENSCAFG00845009370) #25 FHOD1 (ENSCAFG00845009145) #26 SLC9A5 (ENSCAFG00845009040) #27 PLEKHG4 (ENSCAFG00845008847) #28 KCTD19 (ENSCAFG00845008661) #29 LRRC36 (ENSCAFG00845008572) #30 TPPP3 (ENSCAFG00845008424) #31 ZDHHC1 (ENSCAFG00845008324) #32 HSD11B2 (ENSCAFG00845008256) #33 ATP6V0D1 (ENSCAFG00845008188) #34 AGRP (ENSCAFG00845008104) #35 RIPOR1 (ENSCAFG00845007707) #36 CTCF (ENSCAFG00845007437) #37 Dingo DUPLICATION Dingo MODERN SPECIES 2 ENSCAFG00020027102 ENSCAFG00020027103 ENSCAFG00020027107 ENSCAFG00020027109 YTHDC1 (ENSCAFG00020027112) TMPRSS11E (ENSCAFG00020027116) ENSCAFG00020027117 TMPRSS11F (ENSCAFG00020027118) ENSCAFG00020027120 TMPRSS11A (ENSCAFG00020027122) TMPRSS11D (ENSCAFG00020027124) ENSCAFG00020027128 GNRHR (ENSCAFG00020027129) UBA6 (ENSCAFG00020027143) CENPC (ENSCAFG00020027175) ENSCAFG00020027180 #22 EPHA5 (ENSCAFG00020027199) TECRL (ENSCAFG00020027208) ADGRL3 (ENSCAFG00020027216) ENSCAFG00020027309 ENSCAFG00020027310 ENSCAFG00020027312 ENSCAFG00020027313 ENSCAFG00020027315 IGFBP7 (ENSCAFG00020027316) POLR2B (ENSCAFG00020027317) NOA1 (ENSCAFG00020027319) ENSCAFG00020027320 ENSCAFG00020027322 ENSCAFG00020027323 THEGL (ENSCAFG00020027324) Dingo MODERN SPECIES 373 CA7 (ENSCAFG00020017940) CDH16 (ENSCAFG00020017962) #8 RRAD (ENSCAFG00020018006) #9 CIAO2B (ENSCAFG00020018022) #10 CES2 (ENSCAFG00020018024) #11 ENSCAFG00020018031 CBFB (ENSCAFG00020018039) #13 PHAF1 (ENSCAFG00020018043) #14 B3GNT9 (ENSCAFG00020018052) #15 TRADD (ENSCAFG00020018054) #16 FBXL8 (ENSCAFG00020018057) #17 HSF4 (ENSCAFG00020018058) #18 ENSCAFG00020018066 #19 MATCAP1 (ENSCAFG00020018068) #20 EXOC3L1 (ENSCAFG00020018073) #21 ENSCAFG00020018080 #22 ELMO3 (ENSCAFG00020018084) #23 ENSCAFG00020018090 #24 TMEM208 (ENSCAFG00020018093) #25 FHOD1 (ENSCAFG00020018094) #26 SLC9A5 (ENSCAFG00020018099) #27 ENSCAFG00020018116 #28 ENSCAFG00020018122 #28 KCTD19 (ENSCAFG00020018130) #29 LRRC36 (ENSCAFG00020018145) #30 TPPP3 (ENSCAFG00020018161) #31 ZDHHC1 (ENSCAFG00020018166) #32 HSD11B2 (ENSCAFG00020018177) #33 ATP6V0D1 (ENSCAFG00020018180) #34 AGRP (ENSCAFG00020018182) #35 RIPOR1 (ENSCAFG00020018185) #36 Laurasiatheria_c ANCESTRAL SPECIES 4 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000164375 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Equus ANCESTRAL SPECIES 20 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 ENSGT00940000161003 Donkey MODERN SPECIES 20 PDP2 (ENSEASG00005025884) #7 CDH16 (ENSEASG00005010892) #8 RRAD (ENSEASG00005010896) #9 CIAO2B (ENSEASG00005031727) #10 CES2 (ENSEASG00005010903) #11 CES3 (ENSEASG00005010928) CBFB (ENSEASG00005010936) #13 PHAF1 (ENSEASG00005010953) #14 B3GNT9 (ENSEASG00005034023) #15 TRADD (ENSEASG00005011002) #16 FBXL8 (ENSEASG00005034607) #17 HSF4 (ENSEASG00005011004) #18 ENSEASG00005011062 #19 MATCAP1 (ENSEASG00005011064) #20 EXOC3L1 (ENSEASG00005011071) #21 E2F4 (ENSEASG00005011078) #22 ELMO3 (ENSEASG00005011163) #23 TMEM208 (ENSEASG00005012536) #25 FHOD1 (ENSEASG00005012549) #26 SLC9A5 (ENSEASG00005012688) #27 PLEKHG4 (ENSEASG00005012694) #28 KCTD19 (ENSEASG00005012701) #29 LRRC36 (ENSEASG00005012707) #30 TPPP3 (ENSEASG00005028584) #31 ZDHHC1 (ENSEASG00005012723) #32 HSD11B2 (ENSEASG00005012736) #33 ATP6V0D1 (ENSEASG00005012742) #34 AGRP (ENSEASG00005012748) #35 RIPOR1 (ENSEASG00005012769) #36 CTCF (ENSEASG00005012799) #37 CARMIL2 (ENSEASG00005012824) Horse MODERN SPECIES 22 CA7 (ENSECAG00000024943) PDP2 (ENSECAG00000006359) #7 CDH16 (ENSECAG00000009969) #8 RRAD (ENSECAG00000006674) #9 CES2 (ENSECAG00000012061) CIAO2B (ENSECAG00000010902) #10 CES3 (ENSECAG00000010334) CBFB (ENSECAG00000014879) #13 PHAF1 (ENSECAG00000022219) #14 B3GNT9 (ENSECAG00000006409) #15 TRADD (ENSECAG00000013754) #16 FBXL8 (ENSECAG00000034017) #17 HSF4 (ENSECAG00000016708) #18 MATCAP1 (ENSECAG00000024529) #20 EXOC3L1 (ENSECAG00000001268) #21 E2F4 (ENSECAG00000015595) #22 ELMO3 (ENSECAG00000006824) #23 FHOD1 (ENSECAG00000013595) #26 SLC9A5 (ENSECAG00000020279) #27 KCTD19 (ENSECAG00000014064) #29 PLEKHG4 (ENSECAG00000006999) #28 LRRC36 (ENSECAG00000021516) #30 TPPP3 (ENSECAG00000007133) #31 ZDHHC1 (ENSECAG00000010730) #32 HSD11B2 (ENSECAG00000014152) #33 ATP6V0D1 (ENSECAG00000015817) #34 RIPOR1 (ENSECAG00000018681) #36 AGRP (ENSECAG00000016828) #35 CTCF (ENSECAG00000015924) #37 CARMIL2 (ENSECAG00000010729) ACD (ENSECAG00000020293) Chiroptera ANCESTRAL SPECIES 21 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000164375 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Megabat MODERN SPECIES 2556 EXOC3L1 (ENSPVAG00000005273) #21 E2F4 (ENSPVAG00000005274) #22 ELMO3 (ENSPVAG00000005275) #23 ENSPVAG00000005276 #24 TMEM208 (ENSPVAG00000005277) #25 FHOD1 (ENSPVAG00000005280) #26 SLC9A5 (ENSPVAG00000005281) #27 Microchiroptera ANCESTRAL SPECIES 12 ENSGT00550000074901 ENSGT00940000159757 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Greater horseshoe bat MODERN SPECIES 6 TERB1 (ENSRFEG00010011648) NAE1 (ENSRFEG00010011905) CA7 (ENSRFEG00010012260) CDH16 (ENSRFEG00010012368) #8 RRAD (ENSRFEG00010012702) #9 CIAO2B (ENSRFEG00010012765) #10 CBFB (ENSRFEG00010012858) #13 PHAF1 (ENSRFEG00010012954) #14 B3GNT9 (ENSRFEG00010013003) #15 TRADD (ENSRFEG00010013012) #16 FBXL8 (ENSRFEG00010013130) #17 HSF4 (ENSRFEG00010013178) #18 NOL3 (ENSRFEG00010013567) #19 MATCAP1 (ENSRFEG00010013678) #20 EXOC3L1 (ENSRFEG00010013737) #21 E2F4 (ENSRFEG00010013945) #22 ELMO3 (ENSRFEG00010014029) #23 ENSRFEG00010014143 #24 ENSRFEG00010014162 #24 TMEM208 (ENSRFEG00010014189) #25 FHOD1 (ENSRFEG00010014292) #26 SLC9A5 (ENSRFEG00010014393) #27 ENSRFEG00010014828 #28 KCTD19 (ENSRFEG00010014975) #29 LRRC36 (ENSRFEG00010015268) #30 TPPP3 (ENSRFEG00010015768) #31 ZDHHC1 (ENSRFEG00010015816) #32 HSD11B2 (ENSRFEG00010015871) #33 ATP6V0D1 (ENSRFEG00010015904) #34 AGRP (ENSRFEG00010015961) #35 RIPOR1 (ENSRFEG00010016037) #36 Microbat MODERN SPECIES 1211 NAE1 (ENSMLUG00000012976) CA7 (ENSMLUG00000012984) PDP2 (ENSMLUG00000014958) #7 CDH16 (ENSMLUG00000013705) #8 RRAD (ENSMLUG00000013700) #9 CIAO2B (ENSMLUG00000014953) #10 CBFB (ENSMLUG00000010999) #13 ENSMLUG00000011012 #14 B3GNT9 (ENSMLUG00000023514) #15 TRADD (ENSMLUG00000011054) #16 FBXL8 (ENSMLUG00000011063) #17 HSF4 (ENSMLUG00000011083) #18 ENSMLUG00000011138 #19 MATCAP1 (ENSMLUG00000011150) #20 EXOC3L1 (ENSMLUG00000001121) #21 E2F4 (ENSMLUG00000023162) #22 ELMO3 (ENSMLUG00000001134) #23 ENSMLUG00000001143 #24 TMEM208 (ENSMLUG00000001149) #25 FHOD1 (ENSMLUG00000001154) #26 SLC9A5 (ENSMLUG00000001170) #27 PLEKHG4 (ENSMLUG00000001181) #28 KCTD19 (ENSMLUG00000001193) #29 LRRC36 (ENSMLUG00000001203) #30 ENSMLUG00000026149 TPPP3 (ENSMLUG00000005171) #31 ZDHHC1 (ENSMLUG00000005174) #32 HSD11B2 (ENSMLUG00000024893) #33 ATP6V0D1 (ENSMLUG00000005187) #34 AGRP (ENSMLUG00000005196) #35 RIPOR1 (ENSMLUG00000005201) #36 Artiodactyla ANCESTRAL SPECIES 5 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Suina ANCESTRAL SPECIES 2 ENSGT00940000159757 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Pig MODERN SPECIES 14 TERB1 (ENSSSCG00000035639) CA7 (ENSSSCG00000038785) PDP2 (ENSSSCG00000036067) #7 CDH16 (ENSSSCG00000022721) #8 RRAD (ENSSSCG00000036060) #9 CIAO2B (ENSSSCG00000033027) #10 CES3 (ENSSSCG00000024476) CBFB (ENSSSCG00000033811) #13 PHAF1 (ENSSSCG00000040749) #14 B3GNT9 (ENSSSCG00000040139) #15 TRADD (ENSSSCG00000036321) #16 FBXL8 (ENSSSCG00000002793) #17 HSF4 (ENSSSCG00000040125) #18 MATCAP1 (ENSSSCG00000032443) #20 EXOC3L1 (ENSSSCG00000002788) #21 E2F4 (ENSSSCG00000002787) #22 ELMO3 (ENSSSCG00000002786) #23 ENSSSCG00000031199 #24 ENSSSCG00000002790 #25 FHOD1 (ENSSSCG00000026116) #26 SLC9A5 (ENSSSCG00000002783) #27 PLEKHG4 (ENSSSCG00000002782) #28 KCTD19 (ENSSSCG00000002781) #29 LRRC36 (ENSSSCG00000002779) #30 TPPP3 (ENSSSCG00000035983) #31 ZDHHC1 (ENSSSCG00000002778) #32 HSD11B2 (ENSSSCG00000002777) #33 ATP6V0D1 (ENSSSCG00000002776) #34 RIPOR1 (ENSSSCG00000002774) #36 AGRP (ENSSSCG00000002775) #35 CTCF (ENSSSCG00000024253) #37 Chacoan peccary MODERN SPECIES 106 PDP2 (ENSCWAG00000019805) #7 CDH16 (ENSCWAG00000019851) #8 RRAD (ENSCWAG00000020265) #9 CIAO2B (ENSCWAG00000020272) #10 CES3 (ENSCWAG00000020290) ENSCWAG00000020325 CBFB (ENSCWAG00000020337) #13 PHAF1 (ENSCWAG00000020358) #14 B3GNT9 (ENSCWAG00000020367) #15 TRADD (ENSCWAG00000020373) #16 FBXL8 (ENSCWAG00000020383) #17 HSF4 (ENSCWAG00000020397) #18 NOL3 (ENSCWAG00000020427) #19 MATCAP1 (ENSCWAG00000020443) #20 EXOC3L1 (ENSCWAG00000020467) #21 E2F4 (ENSCWAG00000020485) #22 ELMO3 (ENSCWAG00000020517) #23 ENSCWAG00000003654 #24 TMEM208 (ENSCWAG00000003685) #25 FHOD1 (ENSCWAG00000003717) #26 SLC9A5 (ENSCWAG00000003762) #27 PLEKHG4 (ENSCWAG00000003836) #28 KCTD19 (ENSCWAG00000003973) #29 LRRC36 (ENSCWAG00000004058) #30 ENSCWAG00000004252 TPPP3 (ENSCWAG00000004283) #31 ZDHHC1 (ENSCWAG00000004315) #32 HSD11B2 (ENSCWAG00000004393) #33 ATP6V0D1 (ENSCWAG00000004436) #34 AGRP (ENSCWAG00000004461) #35 RIPOR1 (ENSCWAG00000004502) #36 Artiodactyla_a ANCESTRAL SPECIES 4 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Camelidae ANCESTRAL SPECIES 9 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT01030000234613.a.b #21 ENSGT00390000004417.b #20 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Arabian camel MODERN SPECIES 35 CDH16 (ENSCDRG00005007160) #8 RRAD (ENSCDRG00005007840) #9 CIAO2B (ENSCDRG00005007905) #10 CES2 (ENSCDRG00005007948) #11 CES3 (ENSCDRG00005008158) CES4A (ENSCDRG00005008394) #12 CBFB (ENSCDRG00005008908) #13 PHAF1 (ENSCDRG00005009104) #14 B3GNT9 (ENSCDRG00005009199) #15 TRADD (ENSCDRG00005009217) #16 FBXL8 (ENSCDRG00005009311) #17 HSF4 (ENSCDRG00005009366) #18 ENSCDRG00005009628 #19 EXOC3L1 (ENSCDRG00005009698) #21 MATCAP1 (ENSCDRG00005009884) #20 E2F4 (ENSCDRG00005009938) #22 ELMO3 (ENSCDRG00005010079) #23 ENSCDRG00005010406 #24 ENSCDRG00005010459 ENSCDRG00005010491 #25 FHOD1 (ENSCDRG00005010592) #26 ENSCDRG00005010675 #26 SLC9A5 (ENSCDRG00005010730) #27 PLEKHG4 (ENSCDRG00005010841) #28 KCTD19 (ENSCDRG00005011106) #29 LRRC36 (ENSCDRG00005011255) #30 TPPP3 (ENSCDRG00005011501) #31 ZDHHC1 (ENSCDRG00005011521) #32 HSD11B2 (ENSCDRG00005011575) #33 ATP6V0D1 (ENSCDRG00005011601) #34 AGRP (ENSCDRG00005011760) #35 Artiodactyla_b ANCESTRAL SPECIES 4 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Cetacea ANCESTRAL SPECIES 6 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a.n #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Blue whale DUPLICATION Blue whale MODERN SPECIES 7 SUPV3L1 (ENSBMSG00010022325) HKDC1 (ENSBMSG00010022316) HK1 (ENSBMSG00010022300) TACR2 (ENSBMSG00010022290) TSPAN15 (ENSBMSG00010022282) NEUROG3 (ENSBMSG00010022279) FAM241B (ENSBMSG00010022278) COL13A1 (ENSBMSG00010018272) MACROH2A2 (ENSBMSG00010017113) AIFM2 (ENSBMSG00010017088) TYSND1 (ENSBMSG00010017063) SAR1A (ENSBMSG00010017041) ENSBMSG00010017012 NPFFR1 (ENSBMSG00010016996) LRRC20 (ENSBMSG00010016966) ENSBMSG00010016948 #22 EIF4EBP2 (ENSBMSG00010016927) NODAL (ENSBMSG00010016907) PALD1 (ENSBMSG00010016880) PRF1 (ENSBMSG00010016858) ADAMTS14 (ENSBMSG00010016763) TBATA (ENSBMSG00010016695) SGPL1 (ENSBMSG00010016639) UNC5B (ENSBMSG00010016561) SLC29A3 (ENSBMSG00010016523) VSIR (ENSBMSG00010016464) CDH23 (ENSBMSG00010014850) PSAP (ENSBMSG00010014455) CHST3 (ENSBMSG00010014411) ENSBMSG00010014391 SPOCK2 (ENSBMSG00010014327) Blue whale MODERN SPECIES 10 ENSBMSG00010015711 PDP2 (ENSBMSG00010015722) #7 CDH16 (ENSBMSG00010015858) #8 RRAD (ENSBMSG00010016627) #9 CIAO2B (ENSBMSG00010016650) #10 CES2 (ENSBMSG00010016703) #11 CBFB (ENSBMSG00010016805) #13 ENSBMSG00010016852 #14 B3GNT9 (ENSBMSG00010016876) #15 TRADD (ENSBMSG00010016899) #16 FBXL8 (ENSBMSG00010016923) #17 HSF4 (ENSBMSG00010016951) #18 NOL3 (ENSBMSG00010016979) #19 MATCAP1 (ENSBMSG00010017022) #20 EXOC3L1 (ENSBMSG00010017075) #21 ENSBMSG00010017137 #22 ELMO3 (ENSBMSG00010017180) #23 ENSBMSG00010017277 #24 TMEM208 (ENSBMSG00010017359) #25 FHOD1 (ENSBMSG00010017401) #26 SLC9A5 (ENSBMSG00010017437) #27 KCTD19 (ENSBMSG00010017657) #29 LRRC36 (ENSBMSG00010017738) #30 TPPP3 (ENSBMSG00010017825) #31 ZDHHC1 (ENSBMSG00010017851) #32 HSD11B2 (ENSBMSG00010017905) #33 ATP6V0D1 (ENSBMSG00010017928) #34 AGRP (ENSBMSG00010017977) #35 RIPOR1 (ENSBMSG00010018027) #36 CTCF (ENSBMSG00010018230) #37 CARMIL2 (ENSBMSG00010018294) Odontoceti ANCESTRAL SPECIES 6 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.q #11 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a.n #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Odontoceti_a ANCESTRAL SPECIES 7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.q #11 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a.n #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Dolphin MODERN SPECIES 1310 NAE1 (ENSTTRG00000010124) CA7 (ENSTTRG00000010154) PDP2 (ENSTTRG00000010159) #7 CDH16 (ENSTTRG00000010162) #8 RRAD (ENSTTRG00000010173) #9 CIAO2B (ENSTTRG00000010181) #10 ENSTTRG00000010185 CBFB (ENSTTRG00000010200) #13 PHAF1 (ENSTTRG00000010207) #14 TRADD (ENSTTRG00000010223) #16 FBXL8 (ENSTTRG00000010233) #17 HSF4 (ENSTTRG00000010241) #18 ENSTTRG00000010251 #19 MATCAP1 (ENSTTRG00000010254) #20 EXOC3L1 (ENSTTRG00000010260) #21 E2F4 (ENSTTRG00000010268) #22 ELMO3 (ENSTTRG00000010275) #23 ENSTTRG00000010287 #24 Odontoceti_b ANCESTRAL SPECIES 5 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.q #11 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a.n #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Monodontidae ANCESTRAL SPECIES 3 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793.q #11 ENSGT00940000155200 ENSGT00940000153314.a.a ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a.n #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00990000205363 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Beluga whale MODERN SPECIES 12 RRAD (ENSDLEG00000002898) #9 FAM96B (ENSDLEG00000002890) #10 CES2 (ENSDLEG00000002869) #11 ENSDLEG00000002860 ENSDLEG00000002849 ENSDLEG00000002836 PHAF1 (ENSDLEG00000002707) #14 B3GNT9 (ENSDLEG00000002671) #15 TRADD (ENSDLEG00000002663) #16 ENSDLEG00000002626 FBXL8 (ENSDLEG00000002619) #17 HSF4 (ENSDLEG00000002590) #18 NOL3 (ENSDLEG00000002571) #19 KIAA0895L (ENSDLEG00000002558) #20 EXOC3L1 (ENSDLEG00000002535) #21 E2F4 (ENSDLEG00000002500) #22 ELMO3 (ENSDLEG00000002444) #23 ENSDLEG00000002413 #24 TMEM208 (ENSDLEG00000002382) #25 FHOD1 (ENSDLEG00000001708) #26 SLC9A5 (ENSDLEG00000001295) #27 ENSDLEG00000001253 #28 ENSDLEG00000001229 #28 KCTD19 (ENSDLEG00000001198) #29 LRRC36 (ENSDLEG00000001147) #30 TPPP3 (ENSDLEG00000001125) #31 ZDHHC1 (ENSDLEG00000001103) #32 HSD11B2 (ENSDLEG00000001092) #33 ATP6V0D1 (ENSDLEG00000001081) #34 AGRP (ENSDLEG00000001071) #35 RIPOR1 (ENSDLEG00000000973) #36 Narwhal DUPLICATION Narwhal MODERN SPECIES 311 SUPV3L1 (ENSMMNG00015018179) HKDC1 (ENSMMNG00015018235) HK1 (ENSMMNG00015018338) TACR2 (ENSMMNG00015018482) TSPAN15 (ENSMMNG00015018513) NEUROG3 (ENSMMNG00015018559) FAM241B (ENSMMNG00015018581) COL13A1 (ENSMMNG00015019392) MACROH2A2 (ENSMMNG00015021163) AIFM2 (ENSMMNG00015021184) TYSND1 (ENSMMNG00015021209) SAR1A (ENSMMNG00015021225) PPA1 (ENSMMNG00015021247) NPFFR1 (ENSMMNG00015021258) LRRC20 (ENSMMNG00015021275) ENSMMNG00015021284 #22 EIF4EBP2 (ENSMMNG00015021294) NODAL (ENSMMNG00015021300) PALD1 (ENSMMNG00015021314) PRF1 (ENSMMNG00015021328) ADAMTS14 (ENSMMNG00015021357) TBATA (ENSMMNG00015021388) SGPL1 (ENSMMNG00015021410) ENSMMNG00015021426 UNC5B (ENSMMNG00015021439) SLC29A3 (ENSMMNG00015021469) CDH23 (ENSMMNG00015021504) C10orf105 (ENSMMNG00015021533) VSIR (ENSMMNG00015021540) PSAP (ENSMMNG00015021549) ENSMMNG00015021560 Narwhal MODERN SPECIES 296 CDH16 (ENSMMNG00015003293) #8 RRAD (ENSMMNG00015003240) #9 CIAO2B (ENSMMNG00015003223) #10 CES2 (ENSMMNG00015003204) #11 ENSMMNG00015003177 ENSMMNG00015003160 CBFB (ENSMMNG00015003148) #13 PHAF1 (ENSMMNG00015003125) #14 B3GNT9 (ENSMMNG00015003108) #15 TRADD (ENSMMNG00015003080) #16 FBXL8 (ENSMMNG00015003059) #17 HSF4 (ENSMMNG00015003012) #18 ENSMMNG00015002974 #19 MATCAP1 (ENSMMNG00015002942) #20 EXOC3L1 (ENSMMNG00015002888) #21 ENSMMNG00015002857 #22 ELMO3 (ENSMMNG00015002794) #23 ENSMMNG00015002763 #24 ENSMMNG00015002751 TMEM208 (ENSMMNG00015002742) #25 FHOD1 (ENSMMNG00015002710) #26 SLC9A5 (ENSMMNG00015002666) #27 PLEKHG4 (ENSMMNG00015002609) #28 KCTD19 (ENSMMNG00015002571) #29 LRRC36 (ENSMMNG00015002487) #30 TPPP3 (ENSMMNG00015002443) #31 ZDHHC1 (ENSMMNG00015002416) #32 HSD11B2 (ENSMMNG00015002384) #33 ATP6V0D1 (ENSMMNG00015002352) #34 AGRP (ENSMMNG00015002325) #35 RIPOR1 (ENSMMNG00015002214) #36 Vaquita DUPLICATION Vaquita MODERN SPECIES 7 SUPV3L1 (ENSPSNG00000019123) HKDC1 (ENSPSNG00000019172) HK1 (ENSPSNG00000019292) TACR2 (ENSPSNG00000019582) TSPAN15 (ENSPSNG00000019618) NEUROG3 (ENSPSNG00000019648) FAM241B (ENSPSNG00000019661) COL13A1 (ENSPSNG00000019849) MACROH2A2 (ENSPSNG00000020131) AIFM2 (ENSPSNG00000020177) TYSND1 (ENSPSNG00000020220) SAR1A (ENSPSNG00000020248) PPA1 (ENSPSNG00000020295) NPFFR1 (ENSPSNG00000020327) LRRC20 (ENSPSNG00000020377) ENSPSNG00000020439 #22 ENSPSNG00000020464 NODAL (ENSPSNG00000020491) PALD1 (ENSPSNG00000020534) PRF1 (ENSPSNG00000020654) ADAMTS14 (ENSPSNG00000020694) TBATA (ENSPSNG00000020841) SGPL1 (ENSPSNG00000020906) ENSPSNG00000020953 UNC5B (ENSPSNG00000021006) SLC29A3 (ENSPSNG00000021104) CDH23 (ENSPSNG00000009904) C10orf105 (ENSPSNG00000011646) VSIR (ENSPSNG00000011665) PSAP (ENSPSNG00000011730) ENSPSNG00000011842 Vaquita MODERN SPECIES 10 NAE1 (ENSPSNG00000016216) CA7 (ENSPSNG00000016396) PDP2 (ENSPSNG00000016552) #7 CDH16 (ENSPSNG00000016664) #8 RRAD (ENSPSNG00000017497) #9 CIAO2B (ENSPSNG00000017545) #10 CES2 (ENSPSNG00000017596) #11 CBFB (ENSPSNG00000017662) #13 PHAF1 (ENSPSNG00000017735) #14 B3GNT9 (ENSPSNG00000017784) #15 FBXL8 (ENSPSNG00000017855) #17 HSF4 (ENSPSNG00000017904) #18 ENSPSNG00000017959 #19 MATCAP1 (ENSPSNG00000018018) #20 EXOC3L1 (ENSPSNG00000018065) #21 ENSPSNG00000018189 #22 ELMO3 (ENSPSNG00000018256) #23 ENSPSNG00000018855 #24 ENSPSNG00000018895 TMEM208 (ENSPSNG00000018943) #25 FHOD1 (ENSPSNG00000019017) #26 SLC9A5 (ENSPSNG00000019084) #27 PLEKHG4 (ENSPSNG00000019161) #28 KCTD19 (ENSPSNG00000019323) #29 LRRC36 (ENSPSNG00000019384) #30 ENSPSNG00000019623 #31 ZDHHC1 (ENSPSNG00000019669) #32 HSD11B2 (ENSPSNG00000019771) #33 ATP6V0D1 (ENSPSNG00000019804) #34 AGRP (ENSPSNG00000019863) #35 RIPOR1 (ENSPSNG00000019920) #36 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 12 VPS26A (ENSPCTG00005006530) SUPV3L1 (ENSPCTG00005006597) HKDC1 (ENSPCTG00005006659) TACR2 (ENSPCTG00005006726) ENSPCTG00005006757 NEUROG3 (ENSPCTG00005006773) FAM241B (ENSPCTG00005006794) COL13A1 (ENSPCTG00005007462) MACROH2A2 (ENSPCTG00005014364) AIFM2 (ENSPCTG00005014407) TYSND1 (ENSPCTG00005014466) SAR1A (ENSPCTG00005014528) PPA1 (ENSPCTG00005014580) ENSPCTG00005014625 ENSPCTG00005014776 ENSPCTG00005014824 #22 EIF4EBP2 (ENSPCTG00005014870) NODAL (ENSPCTG00005014924) PALD1 (ENSPCTG00005014988) PRF1 (ENSPCTG00005015153) ADAMTS14 (ENSPCTG00005015211) SGPL1 (ENSPCTG00005015728) PCBD1 (ENSPCTG00005015772) SLC29A3 (ENSPCTG00005015832) ENSPCTG00005016034 C20H10orf105 (ENSPCTG00005016335) VSIR (ENSPCTG00005016352) CHST3 (ENSPCTG00005016377) ENSPCTG00005016423 ASCC1 (ENSPCTG00005016464) ANAPC16 (ENSPCTG00005016583) Sperm whale MODERN SPECIES 922 TRADD (ENSPCTG00005015903) #16 FBXL8 (ENSPCTG00005015852) #17 HSF4 (ENSPCTG00005015491) #18 ENSPCTG00005015399 #19 KIAA0895L (ENSPCTG00005015241) #20 EXOC3L1 (ENSPCTG00005015029) #21 E2F4 (ENSPCTG00005014982) #22 ELMO3 (ENSPCTG00005014302) #23 ENSPCTG00005014220 #24 ENSPCTG00005014178 TMEM208 (ENSPCTG00005014062) #25 FHOD1 (ENSPCTG00005013971) #26 Pecora ANCESTRAL SPECIES 4 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Yarkand deer MODERN SPECIES 27 PDP2 (ENSCHYG00000022241) #7 CDH16 (ENSCHYG00000022298) #8 RRAD (ENSCHYG00000022736) #9 ENSCHYG00000022775 #10 CES2 (ENSCHYG00000022832) #11 CES3 (ENSCHYG00000022898) CES4A (ENSCHYG00000023100) #12 CBFB (ENSCHYG00000023398) #13 PHAF1 (ENSCHYG00000023443) #14 B3GNT9 (ENSCHYG00000023536) #15 TRADD (ENSCHYG00000023549) #16 ENSCHYG00000023612 #18 NOL3 (ENSCHYG00000023759) #19 MATCAP1 (ENSCHYG00000023823) #20 EXOC3L1 (ENSCHYG00000023914) #21 E2F4 (ENSCHYG00000023962) #22 ELMO3 (ENSCHYG00000024035) #23 ENSCHYG00000024305 #24 TMEM208 (ENSCHYG00000024345) #25 FHOD1 (ENSCHYG00000024493) #26 SLC9A5 (ENSCHYG00000024982) #27 ENSCHYG00000008855 #28 KCTD19 (ENSCHYG00000009258) #29 LRRC36 (ENSCHYG00000009424) #30 ENSCHYG00000009661 TPPP3 (ENSCHYG00000009692) #31 ZDHHC1 (ENSCHYG00000009775) #32 HSD11B2 (ENSCHYG00000009995) #33 ATP6V0D1 (ENSCHYG00000010102) #34 AGRP (ENSCHYG00000010393) #35 RIPOR1 (ENSCHYG00000010451) #36 Percora_a ANCESTRAL SPECIES 4 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Siberian musk deer MODERN SPECIES 125 CDH16 (ENSMMSG00000003008) #8 RRAD (ENSMMSG00000002919) #9 CIAO2B (ENSMMSG00000002906) #10 CES2 (ENSMMSG00000002881) #11 CES3 (ENSMMSG00000002817) CES4A (ENSMMSG00000002458) #12 CBFB (ENSMMSG00000002381) #13 PHAF1 (ENSMMSG00000002333) #14 B3GNT9 (ENSMMSG00000002307) #15 TRADD (ENSMMSG00000002296) #16 FBXL8 (ENSMMSG00000002277) #17 HSF4 (ENSMMSG00000002260) #18 NOL3 (ENSMMSG00000002238) #19 MATCAP1 (ENSMMSG00000002222) #20 EXOC3L1 (ENSMMSG00000002185) #21 E2F4 (ENSMMSG00000002147) #22 ELMO3 (ENSMMSG00000002100) #23 ENSMMSG00000002071 #24 ENSMMSG00000002065 TMEM208 (ENSMMSG00000002038) #25 FHOD1 (ENSMMSG00000002016) #26 SLC9A5 (ENSMMSG00000001982) #27 PLEKHG4 (ENSMMSG00000001910) #28 KCTD19 (ENSMMSG00000001864) #29 LRRC36 (ENSMMSG00000001751) #30 TPPP3 (ENSMMSG00000001723) #31 ZDHHC1 (ENSMMSG00000001705) #32 HSD11B2 (ENSMMSG00000001687) #33 ATP6V0D1 (ENSMMSG00000001667) #34 AGRP (ENSMMSG00000001658) #35 RIPOR1 (ENSMMSG00000001629) #36 Bovidae ANCESTRAL SPECIES 4 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Bovinae ANCESTRAL SPECIES 3 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00900000143253 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 Bos ANCESTRAL SPECIES 4 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637.p #24 ENSGT00900000143253 ENSGT00940000160637.o #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 Bos_a ANCESTRAL SPECIES 22 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637.p #24 ENSGT00900000143253 ENSGT00940000160637.o #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 Domestic yak MODERN SPECIES 12 CDH16 (ENSBGRG00000026897) #8 RRAD (ENSBGRG00000026896) #9 ENSBGRG00000026895 #10 CES2 (ENSBGRG00000026894) #11 CES3 (ENSBGRG00000026893) CES4A (ENSBGRG00000026891) #12 CBFB (ENSBGRG00000026888) #13 PHAF1 (ENSBGRG00000026886) #14 B3GNT9 (ENSBGRG00000026884) #15 TRADD (ENSBGRG00000026883) #16 FBXL8 (ENSBGRG00000026881) #17 HSF4 (ENSBGRG00000026879) #18 NOL3 (ENSBGRG00000026877) #19 MATCAP1 (ENSBGRG00000026876) #20 EXOC3L1 (ENSBGRG00000026874) #21 E2F4 (ENSBGRG00000026873) #22 ELMO3 (ENSBGRG00000026869) #23 ENSBGRG00000026868 #24 ENSBGRG00000026867 #24 TMEM208 (ENSBGRG00000026865) #25 ENSBGRG00000026861 #26 SLC9A5 (ENSBGRG00000026860) #27 PLEKHG4 (ENSBGRG00000026856) #28 KCTD19 (ENSBGRG00000026853) #29 ENSBGRG00000026851 LRRC36 (ENSBGRG00000026835) #30 TPPP3 (ENSBGRG00000026802) #31 ZDHHC1 (ENSBGRG00000026787) #32 HSD11B2 (ENSBGRG00000026764) #33 ATP6V0D1 (ENSBGRG00000026746) #34 AGRP (ENSBGRG00000026735) #35 Wild yak MODERN SPECIES 818 CDH16 (ENSBMUG00000004891) #8 RRAD (ENSBMUG00000004672) #9 ENSBMUG00000004656 #10 CES2 (ENSBMUG00000004631) #11 CES3 (ENSBMUG00000004603) CES4A (ENSBMUG00000004549) #12 ENSBMUG00000004501 #13 PHAF1 (ENSBMUG00000004491) #14 B3GNT9 (ENSBMUG00000004470) #15 TRADD (ENSBMUG00000004465) #16 FBXL8 (ENSBMUG00000004457) #17 HSF4 (ENSBMUG00000004436) #18 ENSBMUG00000004421 #19 MATCAP1 (ENSBMUG00000004402) #20 EXOC3L1 (ENSBMUG00000004386) #21 E2F4 (ENSBMUG00000004337) #22 ELMO3 (ENSBMUG00000004292) #23 ENSBMUG00000004260 #24 ENSBMUG00000004246 TMEM208 (ENSBMUG00000004238) #25 FHOD1 (ENSBMUG00000004193) #26 ENSBMUG00000004095 #26 SLC9A5 (ENSBMUG00000004079) #27 PLEKHG4 (ENSBMUG00000004054) #28 KCTD19 (ENSBMUG00000003932) #29 ENSBMUG00000003916 LRRC36 (ENSBMUG00000003891) #30 TPPP3 (ENSBMUG00000003823) #31 ZDHHC1 (ENSBMUG00000003794) #32 HSD11B2 (ENSBMUG00000003730) #33 ATP6V0D1 (ENSBMUG00000003696) #34 Bos_b ANCESTRAL SPECIES ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637.p #24 ENSGT00940000160637.o #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00940000156218.b ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 Cow MODERN SPECIES 9 CDH16 (ENSBTAG00000009585) #8 RRAD (ENSBTAG00000013929) #9 CIAO2B (ENSBTAG00000013931) #10 CES2 (ENSBTAG00000005093) #11 CES3 (ENSBTAG00000040413) CES4A (ENSBTAG00000038325) #12 CBFB (ENSBTAG00000016103) #13 PHAF1 (ENSBTAG00000005058) #14 B3GNT9 (ENSBTAG00000049665) #15 TRADD (ENSBTAG00000012642) #16 FBXL8 (ENSBTAG00000023632) #17 HSF4 (ENSBTAG00000003514) #18 NOL3 (ENSBTAG00000003519) #19 MATCAP1 (ENSBTAG00000003521) #20 EXOC3L1 (ENSBTAG00000012035) #21 E2F4 (ENSBTAG00000012063) #22 ELMO3 (ENSBTAG00000001286) #23 ENSBTAG00000001287 #24 TMEM208 (ENSBTAG00000002327) #25 FHOD1 (ENSBTAG00000032427) #26 SLC9A5 (ENSBTAG00000039190) #27 PLEKHG4 (ENSBTAG00000021570) #28 KCTD19 (ENSBTAG00000032396) #29 LRRC36 (ENSBTAG00000001838) #30 ENSBTAG00000046690 TPPP3 (ENSBTAG00000019822) #31 ZDHHC1 (ENSBTAG00000038134) #32 HSD11B2 (ENSBTAG00000005685) #33 ATP6V0D1 (ENSBTAG00000014553) #34 AGRP (ENSBTAG00000014556) #35 RIPOR1 (ENSBTAG00000008860) #36 Hybrid Bos Indicus MODERN SPECIES 9 CDH16 (ENSBIXG00005020523) #8 RRAD (ENSBIXG00005020587) #9 CIAO2B (ENSBIXG00005003480) #10 CES2 (ENSBIXG00005020621) #11 CES3 (ENSBIXG00005003507) CES4A (ENSBIXG00005020830) #12 CBFB (ENSBIXG00005003530) #13 PHAF1 (ENSBIXG00005020907) #14 B3GNT9 (ENSBIXG00005005675) #15 TRADD (ENSBIXG00005020967) #16 FBXL8 (ENSBIXG00005020996) #17 HSF4 (ENSBIXG00005021067) #18 ENSBIXG00005021092 #19 MATCAP1 (ENSBIXG00005021118) #20 EXOC3L1 (ENSBIXG00005005746) #21 E2F4 (ENSBIXG00005021168) #22 ELMO3 (ENSBIXG00005021218) #23 ENSBIXG00005021263 #24 TMEM208 (ENSBIXG00005021309) #25 FHOD1 (ENSBIXG00005003605) #26 SLC9A5 (ENSBIXG00005021398) #27 PLEKHG4 (ENSBIXG00005021557) #28 KCTD19 (ENSBIXG00005021614) #29 ENSBIXG00005003649 LRRC36 (ENSBIXG00005021780) #30 TPPP3 (ENSBIXG00005021813) #31 ZDHHC1 (ENSBIXG00005021870) #32 HSD11B2 (ENSBIXG00005021881) #33 ATP6V0D1 (ENSBIXG00005003697) #34 AGRP (ENSBIXG00005021957) #35 RIPOR1 (ENSBIXG00005022104) #36 American bison DUPLICATION American bison MODERN SPECIES 3150 COL14A1 (ENSBBBG00000014949) DEPTOR (ENSBBBG00000000969) DSCC1 (ENSBBBG00000000990) TAF2 (ENSBBBG00000001006) ENPP2 (ENSBBBG00000001054) ENSBBBG00000001221 SLC10A5 (ENSBBBG00000001243) ZFAND1 (ENSBBBG00000003681) CHMP4C (ENSBBBG00000014880) SNX16 (ENSBBBG00000014866) ENSBBBG00000003657 RALYL (ENSBBBG00000002824) ENSBBBG00000014729 ENSBBBG00000014705 LRRCC1 (ENSBBBG00000014695) ENSBBBG00000014664 #22 ENSBBBG00000014657 ENSBBBG00000014641 CA13 (ENSBBBG00000014615) ENSBBBG00000014608 ENSBBBG00000014601 ENSBBBG00000014595 ENSBBBG00000009132 CA3 (ENSBBBG00000009126) CA2 (ENSBBBG00000003416) ENSBBBG00000003411 ATP6V0D2 (ENSBBBG00000014549) ##34 ENSBBBG00000014538 WWP1 (ENSBBBG00000003399) RMDN1 (ENSBBBG00000003379) American bison MODERN SPECIES 3211 RRAD (ENSBBBG00000014738) #9 CIAO2B (ENSBBBG00000014743) #10 CES2 (ENSBBBG00000014778) #11 ENSBBBG00000014790 ENSBBBG00000014799 CES4A (ENSBBBG00000007359) #12 ENSBBBG00000003663 #13 PHAF1 (ENSBBBG00000014888) #14 B3GNT9 (ENSBBBG00000003675) #15 TRADD (ENSBBBG00000007361) #16 FBXL8 (ENSBBBG00000014921) #17 HSF4 (ENSBBBG00000001199) #18 NOL3 (ENSBBBG00000001188) #19 MATCAP1 (ENSBBBG00000001162) #20 EXOC3L1 (ENSBBBG00000001140) #21 E2F4 (ENSBBBG00000001117) #22 ELMO3 (ENSBBBG00000000997) #23 ENSBBBG00000000951 #24 ENSBBBG00000000949 TMEM208 (ENSBBBG00000000934) #25 ENSBBBG00000000858 #26 ENSBBBG00000000848 #26 SLC9A5 (ENSBBBG00000000822) #27 PLEKHG4 (ENSBBBG00000014974) #28 KCTD19 (ENSBBBG00000014992) #29 ENSBBBG00000014995 LRRC36 (ENSBBBG00000003737) #30 TPPP3 (ENSBBBG00000015070) #31 ZDHHC1 (ENSBBBG00000015085) #32 HSD11B2 (ENSBBBG00000003742) #33 ATP6V0D1 (ENSBBBG00000015106) #34 Caprinae ANCESTRAL SPECIES 4 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Goat MODERN SPECIES 9 CDH16 (ENSCHIG00000023982) #8 RRAD (ENSCHIG00000014464) #9 CIAO2B (ENSCHIG00000013136) #10 CES2 (ENSCHIG00000019303) #11 CES3 (ENSCHIG00000024208) CES4A (ENSCHIG00000016586) #12 CBFB (ENSCHIG00000020674) #13 PHAF1 (ENSCHIG00000020303) #14 B3GNT9 (ENSCHIG00000014321) #15 TRADD (ENSCHIG00000024921) #16 FBXL8 (ENSCHIG00000015480) #17 HSF4 (ENSCHIG00000003853) #18 ENSCHIG00000017201 #19 MATCAP1 (ENSCHIG00000015211) #20 EXOC3L1 (ENSCHIG00000024506) #21 E2F4 (ENSCHIG00000016663) #22 ELMO3 (ENSCHIG00000026708) #23 ENSCHIG00000019793 #24 TMEM208 (ENSCHIG00000025511) #25 FHOD1 (ENSCHIG00000025985) #26 SLC9A5 (ENSCHIG00000010558) #27 PLEKHG4 (ENSCHIG00000014998) #28 KCTD19 (ENSCHIG00000018050) #29 LRRC36 (ENSCHIG00000011267) #30 TPPP3 (ENSCHIG00000021248) #31 ZDHHC1 (ENSCHIG00000009629) #32 HSD11B2 (ENSCHIG00000004358) #33 ATP6V0D1 (ENSCHIG00000017558) #34 AGRP (ENSCHIG00000025951) #35 RIPOR1 (ENSCHIG00000008773) #36 CTCF (ENSCHIG00000013690) #37 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 19 THAP2 (ENSOARG00020002399) TMEM19 (ENSOARG00020002407) RAB21 (ENSOARG00020002440) TBC1D15 (ENSOARG00020002469) TPH2 (ENSOARG00020002610) ENSOARG00020002632 TRHDE (ENSOARG00020002645) ENSOARG00020002666 NSMCE1 (ENSOARG00020002686) KDM8 (ENSOARG00020002713) ENSOARG00020002731 ATXN7L3B (ENSOARG00020002735) KCNC2 (ENSOARG00020002747) CAPS2 (ENSOARG00020002788) GLIPR1L1 (ENSOARG00020002811) ENSOARG00020002828 #22 GLIPR1 (ENSOARG00020002870) KRR1 (ENSOARG00020002893) PHLDA1 (ENSOARG00020002913) ENSOARG00020002933 OSBPL8 (ENSOARG00020003030) BBS10 (ENSOARG00020003354) ENSOARG00020003381 ZDHHC17 (ENSOARG00020003403) CSRP2 (ENSOARG00020003468) E2F7 (ENSOARG00020003529) NAV3 (ENSOARG00020003813) SYT1 (ENSOARG00020005626) PAWR (ENSOARG00020005665) PPP1R12A (ENSOARG00020005817) PTPRQ (ENSOARG00020008080) Rambouillet Sheep MODERN SPECIES 5 CDH16 (ENSOARG00020017267) #8 RRAD (ENSOARG00020017701) #9 CIAO2B (ENSOARG00020017741) #10 CES2 (ENSOARG00020017788) #11 CES3 (ENSOARG00020017918) CES4A (ENSOARG00020018190) #12 CBFB (ENSOARG00020018510) #13 PHAF1 (ENSOARG00020018589) #14 B3GNT9 (ENSOARG00020018774) #15 TRADD (ENSOARG00020018788) #16 FBXL8 (ENSOARG00020018825) #17 HSF4 (ENSOARG00020018866) #18 ENSOARG00020018928 #19 MATCAP1 (ENSOARG00020018962) #20 EXOC3L1 (ENSOARG00020019062) #21 ENSOARG00020019148 #22 ELMO3 (ENSOARG00020019220) #23 ENSOARG00020019801 #24 TMEM208 (ENSOARG00020019829) #25 SLC9A5 (ENSOARG00020020928) #27 PLEKHG4 (ENSOARG00020021085) #28 KCTD19 (ENSOARG00020021493) #29 LRRC36 (ENSOARG00020021598) #30 TPPP3 (ENSOARG00020021942) #31 ZDHHC1 (ENSOARG00020021964) #32 HSD11B2 (ENSOARG00020022068) #33 ATP6V0D1 (ENSOARG00020022126) #34 AGRP (ENSOARG00020022169) #35 RIPOR1 (ENSOARG00020022218) #36 CTCF (ENSOARG00020022476) #37 CARMIL2 (ENSOARG00020022572) Atlantogenata ANCESTRAL SPECIES 24 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Xenarthra ANCESTRAL SPECIES 31 ENSGT00550000074901 ENSGT00940000159757 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000162243 #15 ENSGT00940000153528.a.b.a.a #14 ENSGT00390000002016 #16 ENSGT00940000158063 #18 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 Armadillo MODERN SPECIES 1766 NAE1 (ENSDNOG00000019167) CA7 (ENSDNOG00000019175) PDP2 (ENSDNOG00000001626) #7 CDH16 (ENSDNOG00000040290) #8 RRAD (ENSDNOG00000004763) #9 CIAO2B (ENSDNOG00000019604) #10 CES2 (ENSDNOG00000036173) #11 CES3 (ENSDNOG00000016221) CBFB (ENSDNOG00000045626) #13 B3GNT9 (ENSDNOG00000036814) #15 PHAF1 (ENSDNOG00000032949) #14 TRADD (ENSDNOG00000043193) #16 HSF4 (ENSDNOG00000032363) #18 MATCAP1 (ENSDNOG00000038114) #20 EXOC3L1 (ENSDNOG00000033619) #21 E2F4 (ENSDNOG00000041139) #22 ELMO3 (ENSDNOG00000002885) #23 ENSDNOG00000044213 #24 TMEM208 (ENSDNOG00000044413) #25 FHOD1 (ENSDNOG00000019344) #26 SLC9A5 (ENSDNOG00000002725) #27 PLEKHG4 (ENSDNOG00000000367) #28 KCTD19 (ENSDNOG00000012061) #29 ENSDNOG00000036562 LRRC36 (ENSDNOG00000012543) #30 TPPP3 (ENSDNOG00000018201) #31 ZDHHC1 (ENSDNOG00000031670) #32 HSD11B2 (ENSDNOG00000011831) #33 ATP6V0D1 (ENSDNOG00000045091) #34 Afrotheria ANCESTRAL SPECIES 48 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Tenrec DUPLICATION Tenrec MODERN SPECIES 7974 MATCAP1 (ENSETEG00000001966) #20 EXOC3L1 (ENSETEG00000001967) #21 ENSETEG00000001969 #22 ENSETEG00000001971 #26 Tenrec MODERN SPECIES 19132 ENSETEG00000016048 #22 Afrotheria_a ANCESTRAL SPECIES 47 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000153793 #11 ENSGT00940000155200 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a #34 ENSGT00940000154258.b #35 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 Elephant MODERN SPECIES 419 PDP2 (ENSLAFG00000001832) #7 CDH16 (ENSLAFG00000001834) #8 RRAD (ENSLAFG00000001836) #9 CIAO2B (ENSLAFG00000025861) #10 CES2 (ENSLAFG00000007540) #11 CES3 (ENSLAFG00000001736) ENSLAFG00000005502 #13 PHAF1 (ENSLAFG00000006284) #14 B3GNT9 (ENSLAFG00000027277) #15 TRADD (ENSLAFG00000006288) #16 FBXL8 (ENSLAFG00000022599) #17 HSF4 (ENSLAFG00000021984) #18 ENSLAFG00000025992 #19 MATCAP1 (ENSLAFG00000027287) #20 EXOC3L1 (ENSLAFG00000032050) #21 E2F4 (ENSLAFG00000026216) #22 ELMO3 (ENSLAFG00000006304) #23 ENSLAFG00000006309 #24 TMEM208 (ENSLAFG00000021815) #25 FHOD1 (ENSLAFG00000004623) #26 SLC9A5 (ENSLAFG00000010117) #27 ENSLAFG00000004633 #28 KCTD19 (ENSLAFG00000004638) #29 LRRC36 (ENSLAFG00000004644) #30 TPPP3 (ENSLAFG00000009485) #31 ZDHHC1 (ENSLAFG00000004648) #32 HSD11B2 (ENSLAFG00000008952) #33 ATP6V0D1 (ENSLAFG00000008957) #34 AGRP (ENSLAFG00000016061) #35 RIPOR1 (ENSLAFG00000030162) #36 CTCF (ENSLAFG00000007101) #37 Hyrax MODERN SPECIES 5087 CBFB (ENSPCAG00000012845) #13 PHAF1 (ENSPCAG00000012878) #14 TRADD (ENSPCAG00000012975) #16 FBXL8 (ENSPCAG00000013001) #17 HSF4 (ENSPCAG00000013012) #18 ENSPCAG00000013098 #19 MATCAP1 (ENSPCAG00000013111) #20 EXOC3L1 (ENSPCAG00000013144) #21 E2F4 (ENSPCAG00000013266) #22 ELMO3 (ENSPCAG00000013300) #23 ENSPCAG00000013427 #24 TMEM208 (ENSPCAG00000013471) #25 FHOD1 (ENSPCAG00000013507) #26 SLC9A5 (ENSPCAG00000013649) #27 Marsupialia ANCESTRAL SPECIES 17 ENSGT00940000160687 #7 ENSGT00940000161650 #8 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000155200 ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212.ib #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a.q #34 ENSGT00940000154258.b #35 ENSGT00940000163363 ENSGT00940000153717.b #36 Opossum MODERN SPECIES PDP2 (ENSMODG00000006788) #7 CDH16 (ENSMODG00000006775) #8 CIAO2B (ENSMODG00000006732) #10 CES2.1 (ENSMODG00000006625) ENSMODG00000048451 #11 ENSMODG00000006385 CES4A (ENSMODG00000006366) #12 CBFB (ENSMODG00000006352) #13 PHAF1 (ENSMODG00000006324) #14 B3GNT9 (ENSMODG00000023085) #15 TRADD (ENSMODG00000006242) #16 HSF4 (ENSMODG00000006228) #18 ENSMODG00000006210 #19 MATCAP1 (ENSMODG00000006203) #20 EXOC3L1 (ENSMODG00000006186) #21 E2F4 (ENSMODG00000006150) #22 ELMO3 (ENSMODG00000006128) #23 ENSMODG00000006063 #24 TMEM208 (ENSMODG00000006058) #25 FHOD1 (ENSMODG00000006046) #26 SLC9A5 (ENSMODG00000006020) #27 ENSMODG00000005997 #28 KCTD19 (ENSMODG00000005972) #29 LRRC36 (ENSMODG00000005963) #30 TPPP3 (ENSMODG00000005950) #31 ZDHHC1 (ENSMODG00000005943) #32 ENSMODG00000005918 #34 AGRP (ENSMODG00000005903) #35 ENSMODG00000045811 ENSMODG00000005860 ENSMODG00000041452 Marsupialia_b ANCESTRAL SPECIES 19 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000155200.g.b ENSGT00940000155200.g.a ENSGT00940000155200.h ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212.ib #26 ENSGT00940000159190 #27 ENSGT00940000158845.o #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a.q #34 ENSGT00940000154258.b #35 ENSGT00940000163363 ENSGT00940000153717.b #36 Diprotodontia ANCESTRAL SPECIES 13 ENSGT00940000159836 #9 ENSGT00390000017697.b #10 ENSGT00940000155200.g.b ENSGT00940000155200.g.a ENSGT00940000155200.h ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212.ib #26 ENSGT00940000159190 #27 ENSGT00940000158845.o #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a.q #34 ENSGT00940000154258.b #35 ENSGT00940000163363 ENSGT00940000153717.b #36 Diprotodontia_a ANCESTRAL SPECIES 14 ENSGT00390000017697.b #10 ENSGT00940000155200.g.a.b.a ENSGT00940000155200.g.b ENSGT00940000155200.g.a.a ENSGT00940000155200.h ENSGT00940000162924 #12 ENSGT00390000018132 #13 ENSGT00940000153528.a.b.a.a #14 ENSGT00940000162243 #15 ENSGT00390000002016 #16 ENSGT00420000029943 #17 ENSGT00940000158063 #18 ENSGT00510000049353 #19 ENSGT00390000004417.b #20 ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000160212.ib #26 ENSGT00940000159190 #27 ENSGT00940000158845.o.a #28 ENSGT00390000007606 #29 ENSGT00530000063884.b #30 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 ENSGT00940000159716 #33 ENSGT00390000002200.a.a.q #34 ENSGT00940000154258.b #35 ENSGT00940000163363 ENSGT00940000153717.b #36 Common wonbat MODERN SPECIES 312 ENSVURG00010021749 ENSVURG00010021716 CES4A (ENSVURG00010021710) #12 CBFB (ENSVURG00010021706) #13 PHAF1 (ENSVURG00010021697) #14 B3GNT9 (ENSVURG00010021694) #15 TRADD (ENSVURG00010021691) #16 ENSVURG00010021684 #17 ENSVURG00010021678 #18 ENSVURG00010021674 #18 ENSVURG00010021668 #19 EXOC3L1 (ENSVURG00010021660) #21 E2F4 (ENSVURG00010021654) #22 ELMO3 (ENSVURG00010021648) #23 ENSVURG00010021642 #24 TMEM208 (ENSVURG00010021633) #25 FHOD1 (ENSVURG00010021625) #26 SLC9A5 (ENSVURG00010021611) #27 ENSVURG00010021593 #28 KCTD19 (ENSVURG00010021585) #29 LRRC36 (ENSVURG00010021578) #30 TPPP3 (ENSVURG00010021572) #31 ZDHHC1 (ENSVURG00010021560) #32 HSD11B2 (ENSVURG00010021554) #33 ATP6V0D1 (ENSVURG00010021547) #34 AGRP (ENSVURG00010021542) #35 ENSVURG00010021537 ENSVURG00010021530 koala MODERN SPECIES 34 ENSPCIG00000017521 ENSPCIG00000036489 ENSPCIG00000037319 ENSPCIG00000015988 ENSPCIG00000017523 ENSPCIG00000017525 #12 CBFB (ENSPCIG00000017526) #13 PHAF1 (ENSPCIG00000017527) #14 B3GNT9 (ENSPCIG00000017528) #15 TRADD (ENSPCIG00000017529) #16 FBXL8 (ENSPCIG00000017530) #17 ENSPCIG00000017531 #18 ENSPCIG00000017532 #19 MATCAP1 (ENSPCIG00000034173) #20 EXOC3L1 (ENSPCIG00000017535) #21 E2F4 (ENSPCIG00000017536) #22 ELMO3 (ENSPCIG00000017537) #23 ENSPCIG00000017538 #24 TMEM208 (ENSPCIG00000017539) #25 ENSPCIG00000017540 #26 ENSPCIG00000036240 #26 SLC9A5 (ENSPCIG00000017541) #27 ENSPCIG00000033012 #28 ENSPCIG00000017542 #28 KCTD19 (ENSPCIG00000017543) #29 LRRC36 (ENSPCIG00000017545) #30 TPPP3 (ENSPCIG00000017546) #31 ZDHHC1 (ENSPCIG00000017547) #32 HSD11B2 (ENSPCIG00000032213) #33 ATP6V0D1 (ENSPCIG00000031553) #34 ENSPCIG00000000375 Wallaby MODERN SPECIES 11693 E2F4 (ENSMEUG00000012534) #22 ELMO3 (ENSMEUG00000012507) #23 ENSMEUG00000012494 #24 Tasmanian devil MODERN SPECIES 1 RRAD (ENSSHAG00000027207) #9 CIAO2B (ENSSHAG00000021172) #10 ENSSHAG00000007562 ENSSHAG00000006251 ENSSHAG00000007978 ENSSHAG00000022801 CES3 (ENSSHAG00000030468) ENSSHAG00000009427 #12 ENSSHAG00000026641 #13 B3GNT9 (ENSSHAG00000023665) #15 PHAF1 (ENSSHAG00000027333) #14 ENSSHAG00000010769 #18 ENSSHAG00000010997 #19 MATCAP1 (ENSSHAG00000026018) #20 EXOC3L1 (ENSSHAG00000011228) #21 E2F4 (ENSSHAG00000011293) #22 ELMO3 (ENSSHAG00000011361) #23 ENSSHAG00000011429 #24 TMEM208 (ENSSHAG00000029035) #25 SLC9A5 (ENSSHAG00000011867) #27 ENSSHAG00000012075 #28 KCTD19 (ENSSHAG00000012115) #29 LRRC36 (ENSSHAG00000012364) #30 ZDHHC1 (ENSSHAG00000012709) #32 HSD11B2 (ENSSHAG00000029535) #33 ENSSHAG00000021333 #34 ENSSHAG00000013664 #35 ENSSHAG00000014097 RIPOR1 (ENSSHAG00000001542) #36 CTCF (ENSSHAG00000023860) #37 CARMIL2 (ENSSHAG00000004365) Platypus MODERN SPECIES 84 ENSOANG00000002703 ENSOANG00000042529 ENSOANG00000013673 RAB43 (ENSOANG00000006323) ENSOANG00000019866 CES4A (ENSOANG00000005376) #12 ENSOANG00000014469 #13 PHAF1 (ENSOANG00000001684) #14 B3GNT9 (ENSOANG00000001683) #15 TRADD (ENSOANG00000043400) #16 ENSOANG00000048022 #17 ENSOANG00000002419 #18 ENSOANG00000038691 #19 MATCAP1 (ENSOANG00000000799) #20 ENSOANG00000045487 #21 ENSOANG00000045368 #22 ELMO3 (ENSOANG00000015197) #23 ENSOANG00000015196 #24 TMEM208 (ENSOANG00000036828) #25 FHOD1 (ENSOANG00000015194) #26 ENSOANG00000036976 #28 ENSOANG00000020405 #29 HSD11B2 (ENSOANG00000009417) #33 ATP6V0D1 (ENSOANG00000041210) #34 ENSOANG00000003541 #35 ENSOANG00000003542 RIPOR1 (ENSOANG00000009323) #36 CTCF (ENSOANG00000041591) #37 CARMIL2 (ENSOANG00000000267) ENSOANG00000051017 PARD6A (ENSOANG00000004480) Sauria ANCESTRAL SPECIES 14 ENSGT00390000004877 ENSGT00950000183211.a.a.b ENSGT00940000153866.B ENSGT00390000011138 ENSGT00940000156501 ENSGT00940000158257 ENSGT00390000018598 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 Lepidosauria ANCESTRAL SPECIES 110 ENSGT00940000156672 #37 ENSGT00940000161003 ENSGT00390000004877 ENSGT00950000183211.a.a.b ENSGT00940000153866.B ENSGT00390000011138 ENSGT00940000156501 ENSGT00940000158257 ENSGT00390000018598 ENSGT00390000003044 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 tuatara MODERN SPECIES 275 ENSSPUG00000011453 #22 TMEM208 (ENSSPUG00000011430) #25 Episquamata ANCESTRAL SPECIES 11 ENSGT00950000183211.a.a.b ENSGT00940000153866.B ENSGT00390000011138 ENSGT00940000156501 ENSGT00940000163363.e.b.e.a ENSGT00940000158257 ENSGT00390000018598 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000159191 #32 ENSGT00940000153875.d.b #31 ENSGT00940000159836 #9 ENSGT00940000160687 #7 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a ENSGT00940000159573 ENSGT00940000160432 ENSGT00940000162264 ENSGT00940000158005 Laterata ANCESTRAL SPECIES 19 ENSGT00950000183211.a.a.b ENSGT00940000153866.B ENSGT00390000011138 ENSGT00940000156501 ENSGT00940000163363.e.b.e.a ENSGT00940000158257 ENSGT00390000018598 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00950000182966.A ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000159191 #32 ENSGT00940000153875.d.b #31 ENSGT00940000159836 #9 ENSGT00940000160687 #7 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a ENSGT00940000159573 ENSGT00940000160432 ENSGT00940000162264 ENSGT00940000158005 Common wall lizard MODERN SPECIES 16 PARD6A (ENSPMRG00000008102) ENKD1 (ENSPMRG00000008097) GFOD2 (ENSPMRG00000008087) ENSPMRG00000008074 RANBP10 (ENSPMRG00000008058) ENSPMRG00000008046 ENSPMRG00000008037 THAP11 (ENSPMRG00000008033) NUTF2 (ENSPMRG00000008028) EDC4 (ENSPMRG00000008009) NRN1L (ENSPMRG00000008004) PSKH1 (ENSPMRG00000007996) ENSPMRG00000007989 ENSPMRG00000007981 EXOC3L1 (ENSPMRG00000007976) #21 E2F4 (ENSPMRG00000007959) #22 ELMO3 (ENSPMRG00000007947) #23 ENSPMRG00000007940 #24 TMEM208 (ENSPMRG00000007936) #25 ZDHHC1 (ENSPMRG00000007928) #32 TPPP3 (ENSPMRG00000007922) #31 RRAD (ENSPMRG00000007919) #9 PDP2 (ENSPMRG00000007917) #7 CA7 (ENSPMRG00000007865) NAE1 (ENSPMRG00000007857) TERB1 (ENSPMRG00000007847) DYNC1LI2 (ENSPMRG00000009835) CMTM4 (ENSPMRG00000009828) CMTM3 (ENSPMRG00000009820) TK2 (ENSPMRG00000009758) ENSPMRG00000009722 Argentine black and white tegu MODERN SPECIES 57 CTCF (ENSSMRG00000008740) #37 ENSSMRG00000008742 PARD6A (ENSSMRG00000008746) ENKD1 (ENSSMRG00000008747) ENSSMRG00000008748 GFOD2 (ENSSMRG00000008750) RANBP10 (ENSSMRG00000008752) TSNAXIP1 (ENSSMRG00000008758) ENSSMRG00000008770 ENSSMRG00000008772 NUTF2 (ENSSMRG00000008773) EDC4 (ENSSMRG00000008780) NRN1L (ENSSMRG00000011002) PSKH1 (ENSSMRG00000011009) EXOC3L1 (ENSSMRG00000011010) #21 E2F4 (ENSSMRG00000011011) #22 ELMO3 (ENSSMRG00000011015) #23 ENSSMRG00000011018 #24 TMEM208 (ENSSMRG00000011019) #25 ZDHHC1 (ENSSMRG00000011021) #32 TPPP3 (ENSSMRG00000011023) #31 RRAD (ENSSMRG00000011024) #9 CA7 (ENSSMRG00000011027) NAE1 (ENSSMRG00000011106) TERB1 (ENSSMRG00000011109) DYNC1LI2 (ENSSMRG00000011114) CMTM4 (ENSSMRG00000011134) CMTM3 (ENSSMRG00000011135) CKLF (ENSSMRG00000011136) TK2 (ENSSMRG00000011139) ENSSMRG00000011142 Toxicofera ANCESTRAL SPECIES 16 ENSGT00390000004877 ENSGT00950000183211.a.a.b ENSGT00940000153866.B ENSGT00940000156501 ENSGT00940000163363.e.b.e.a ENSGT00940000158257 ENSGT00390000018598 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000159191 #32 ENSGT00940000153875.d.b #31 ENSGT00940000159836 #9 ENSGT00940000160687 #7 ENSGT00940000159757 ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a ENSGT00940000159573 ENSGT00940000160432 ENSGT00940000162264 ENSGT00940000158005 Lizard MODERN SPECIES 909 RIPOR1 (ENSACAG00000000866) #36 CTCF (ENSACAG00000001050) #37 PARD6A (ENSACAG00000001298) ENSACAG00000001332 GFOD2 (ENSACAG00000040699) RANBP10 (ENSACAG00000001369) TSNAXIP1 (ENSACAG00000001464) ENSACAG00000001517 THAP11 (ENSACAG00000001520) NUTF2 (ENSACAG00000043331) EDC4 (ENSACAG00000001561) NRN1L (ENSACAG00000035762) PSKH1 (ENSACAG00000001729) CTRL (ENSACAG00000001737) EXOC3L1 (ENSACAG00000001844) #21 E2F4 (ENSACAG00000028484) #22 ENSACAG00000040320 ELMO3 (ENSACAG00000001972) #23 ENSACAG00000002306 #24 TMEM208 (ENSACAG00000002308) #25 ENSACAG00000002334 #32 ENSACAG00000002364 #31 RRAD (ENSACAG00000002380) #9 PDP2 (ENSACAG00000002437) #7 NAE1 (ENSACAG00000002445) TERB1 (ENSACAG00000002618) ENSACAG00000035787 DYNC1LI2 (ENSACAG00000002640) CMTM4 (ENSACAG00000040539) ENSACAG00000036514 CMTM3 (ENSACAG00000002812) Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES ENSGT00940000156252.c #22 Elapidae_a ANCESTRAL SPECIES ENSGT00940000156252.c #22 Blue-lipped sea krait MODERN SPECIES 6650 ENSLLTG00000003716 #22 Elapidae ANCESTRAL SPECIES 17 ENSGT00950000183211.a.a.b ENSGT00940000153866.B ENSGT00940000156501 ENSGT00940000163363.e.b.e.a.a.a ENSGT00940000163363.e.b.e.a.a.b ENSGT00940000158257 ENSGT00390000018598 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b.e.a ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252.d #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000159191 #32 ENSGT00940000153875.d.b.p #31 ENSGT00940000159836 #9 ENSGT00940000160687 #7 ENSGT00940000159757.c ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a ENSGT00940000159573 ENSGT00940000160432 ENSGT00940000162264 ENSGT00940000158005 Indian cobra MODERN SPECIES 12 ENKD1 (ENSNNAG00000015215) GFOD2 (ENSNNAG00000015201) ENSNNAG00000015178 ENSNNAG00000015143 RANBP10 (ENSNNAG00000015093) ENSNNAG00000015074 ENSNNAG00000014768 THAP11 (ENSNNAG00000014739) NUTF2 (ENSNNAG00000014714) EDC4 (ENSNNAG00000013835) NRN1L (ENSNNAG00000013787) PSKH1 (ENSNNAG00000013781) ENSNNAG00000013769 CTRL (ENSNNAG00000013758) EXOC3L1 (ENSNNAG00000013704) #21 E2F4 (ENSNNAG00000013662) #22 ELMO3 (ENSNNAG00000013593) #23 ENSNNAG00000013558 #24 TMEM208 (ENSNNAG00000013539) #25 ZDHHC1 (ENSNNAG00000013515) #32 TPPP3 (ENSNNAG00000013506) #31 RRAD (ENSNNAG00000013492) #9 PDP2 (ENSNNAG00000013482) #7 CA7 (ENSNNAG00000013214) NAE1 (ENSNNAG00000013175) TERB1 (ENSNNAG00000013131) DYNC1LI2 (ENSNNAG00000013105) CMTM4 (ENSNNAG00000013091) CMTM3 (ENSNNAG00000013059) CKLF (ENSNNAG00000013042) TK2 (ENSNNAG00000013014) Elapidae_a ANCESTRAL SPECIES 28 ENSGT00390000004877 ENSGT00950000183211.a.a.b ENSGT00940000153866.B ENSGT00940000156501 ENSGT00940000158257 ENSGT00390000018598 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b.e.a ENSGT00940000157041.a ENSGT00940000154494.b ENSGT00950000182966.A ENSGT01030000234613.a.b #21 ENSGT00940000156252.d #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000159191 #32 ENSGT00940000153875.d.b.p #31 ENSGT00940000159836 #9 ENSGT00940000160687 #7 ENSGT00940000159757.c ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a ENSGT00940000159573 ENSGT00940000160432 ENSGT00940000162264 ENSGT00940000158005 Blue-lipped sea krait MODERN SPECIES 3130 E2F4 (ENSLLTG00000017845) #22 ELMO3 (ENSLLTG00000017849) #23 ENSLLTG00000017857 #24 TMEM208 (ENSLLTG00000017860) #25 ZDHHC1 (ENSLLTG00000017864) #32 Acanthophiinae DUPLICATION Acanthophiinae DUPLICATION Acanthophiinae ANCESTRAL SPECIES 268 ENSGT00940000156252.d.b #22 ENSGT00940000156252.d.a.a #22 Eastern brown snake MODERN SPECIES 119 ENSPTXG00000018205 ENSPTXG00000018204 ENSPTXG00000018203 ENSPTXG00000018202 ENSPTXG00000018201 ENSPTXG00000018200 THAP11 (ENSPTXG00000018199) ENSPTXG00000018198 ENSPTXG00000018197 ENSPTXG00000018196 ENSPTXG00000018195 ENSPTXG00000018194 ENSPTXG00000018193 ENSPTXG00000018192 #21 ENSPTXG00000018191 #22 ENSPTXG00000018190 #22 ENSPTXG00000018189 #23 ENSPTXG00000018188 #24 ENSPTXG00000018187 #25 ENSPTXG00000018186 #32 ENSPTXG00000018185 #31 ENSPTXG00000018184 #9 ENSPTXG00000018183 #7 ENSPTXG00000018182 ENSPTXG00000018173 ENSPTXG00000018170 ENSPTXG00000018169 Mainland tiger snake MODERN SPECIES 41 ENSNSUG00000009478 ENSNSUG00000009479 ENSNSUG00000009480 ENSNSUG00000009481 ENSNSUG00000009482 ENSNSUG00000009483 TSNAXIP1 (ENSNSUG00000009485) ENSNSUG00000009489 EDC4 (ENSNSUG00000009493) NRN1L (ENSNSUG00000009506) PSKH1 (ENSNSUG00000009507) ENSNSUG00000009508 ENSNSUG00000009509 #21 ENSNSUG00000009510 #22 E2F4 (ENSNSUG00000009511) #22 ELMO3 (ENSNSUG00000009512) #23 ENSNSUG00000009776 #24 TMEM208 (ENSNSUG00000009777) #25 ZDHHC1 (ENSNSUG00000009778) #32 RRAD (ENSNSUG00000009780) #9 PDP2 (ENSNSUG00000009783) #7 CA7 (ENSNSUG00000009784) NAE1 (ENSNSUG00000009831) TERB1 (ENSNSUG00000010169) DYNC1LI2 (ENSNSUG00000010172) CMTM4 (ENSNSUG00000010174) ENSNSUG00000010176 TK2 (ENSNSUG00000010178) ENSNSUG00000010288 CDH5 (ENSNSUG00000010302) Acanthophiinae ANCESTRAL SPECIES 26 ENSGT00940000153717.b #36 ENSGT00940000156672 #37 ENSGT00950000183211.a.a.b.b ENSGT00940000153866.B ENSGT00940000156501 ENSGT00940000158257 ENSGT00390000018598 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b.e.a ENSGT00940000157041.a ENSGT00940000154494.b ENSGT00950000182966.A ENSGT01030000234613.a.b #21 ENSGT00940000156252.d.a.b #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000159191 #32 ENSGT00940000153875.d.b.p #31 ENSGT00940000159836 #9 ENSGT00940000160687 #7 ENSGT00940000159757.c ENSGT00550000074901 ENSGT00390000005075 ENSGT00390000008295.a ENSGT00940000159573 ENSGT00940000160432 ENSGT00940000162264 ENSGT00940000158005 Eastern brown snake MODERN SPECIES 120 ENSPTXG00000008116 #36 ENSPTXG00000008093 #37 ENSPTXG00000008091 ENSPTXG00000008089 ENSPTXG00000008087 ENSPTXG00000008069 ENSPTXG00000008061 ENSPTXG00000008060 ENSPTXG00000008059 ENSPTXG00000008057 ENSPTXG00000008055 ENSPTXG00000008053 ENSPTXG00000008050 ENSPTXG00000008047 ENSPTXG00000008045 #21 ENSPTXG00000008044 #22 ENSPTXG00000008039 #23 ENSPTXG00000008021 #24 ENSPTXG00000008019 #25 ENSPTXG00000008018 #32 ENSPTXG00000008017 #31 ENSPTXG00000008010 #9 ENSPTXG00000008008 #7 ENSPTXG00000007836 ENSPTXG00000007835 ENSPTXG00000007833 ENSPTXG00000007830 Acanthophiinae ANCESTRAL SPECIES 268 ENSGT00940000156252.d.b #22 ENSGT00940000156252.d.a.a #22 Mainland tiger snake MODERN SPECIES 41 ENSNSUG00000009478 ENSNSUG00000009479 ENSNSUG00000009480 ENSNSUG00000009481 ENSNSUG00000009482 ENSNSUG00000009483 TSNAXIP1 (ENSNSUG00000009485) ENSNSUG00000009489 EDC4 (ENSNSUG00000009493) NRN1L (ENSNSUG00000009506) PSKH1 (ENSNSUG00000009507) ENSNSUG00000009508 ENSNSUG00000009509 #21 ENSNSUG00000009510 #22 E2F4 (ENSNSUG00000009511) #22 ELMO3 (ENSNSUG00000009512) #23 ENSNSUG00000009776 #24 TMEM208 (ENSNSUG00000009777) #25 ZDHHC1 (ENSNSUG00000009778) #32 RRAD (ENSNSUG00000009780) #9 PDP2 (ENSNSUG00000009783) #7 CA7 (ENSNSUG00000009784) NAE1 (ENSNSUG00000009831) TERB1 (ENSNSUG00000010169) DYNC1LI2 (ENSNSUG00000010172) CMTM4 (ENSNSUG00000010174) ENSNSUG00000010176 TK2 (ENSNSUG00000010178) ENSNSUG00000010288 Eastern brown snake MODERN SPECIES 119 ENSPTXG00000018206 #37 ENSPTXG00000018205 ENSPTXG00000018204 ENSPTXG00000018203 ENSPTXG00000018202 ENSPTXG00000018201 ENSPTXG00000018200 THAP11 (ENSPTXG00000018199) ENSPTXG00000018198 ENSPTXG00000018197 ENSPTXG00000018196 ENSPTXG00000018195 ENSPTXG00000018194 ENSPTXG00000018193 ENSPTXG00000018192 #21 ENSPTXG00000018191 #22 ENSPTXG00000018190 #22 ENSPTXG00000018189 #23 ENSPTXG00000018188 #24 ENSPTXG00000018187 #25 ENSPTXG00000018186 #32 ENSPTXG00000018185 #31 ENSPTXG00000018184 #9 ENSPTXG00000018183 #7 ENSPTXG00000018182 ENSPTXG00000018173 ENSPTXG00000018170 ENSPTXG00000018169 Archelosauria ANCESTRAL SPECIES 50 ENSGT00950000183211.a.a.b ENSGT00940000153866.B ENSGT00940000156501 ENSGT00940000158257 ENSGT00390000018598 ENSGT00990000212499 ENSGT00940000165060 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000155365.b ENSGT00940000154258.b #35 ENSGT00390000002200.a.a #34 ENSGT00940000159716 #33 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606.b #29 ENSGT00940000175932 ENSGT00390000007606.a #29 Cryptodira ANCESTRAL SPECIES 14 ENSGT00950000183211.a.a.b ENSGT00940000153866.B ENSGT00940000156501 ENSGT00940000158257 ENSGT00390000018598 ENSGT00990000212499 ENSGT00940000165060 ENSGT00390000003044 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000155365.b ENSGT00940000154258.b #35 ENSGT00390000002200.a.a #34 ENSGT00940000159716 #33 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606.b #29 ENSGT00940000175932 ENSGT00940000153875.d.b #31 Testudinoidea ANCESTRAL SPECIES 13 ENSGT00950000183211.a.a.b ENSGT00940000153866.B ENSGT00940000156501 ENSGT00940000158257 ENSGT00390000018598 ENSGT00390000003044.j ENSGT00990000212499 ENSGT00940000165060 ENSGT00390000003044.i ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139.k #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000155365.b ENSGT00940000154258.b #35 ENSGT00390000002200.a.a #34 ENSGT00940000159716 #33 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606.b #29 ENSGT00940000175932.a ENSGT00940000153875.d.b #31 Emydidae ANCESTRAL SPECIES 33 ENSGT00940000154065.a ENSGT00950000183151.a.a.b ENSGT00940000168336 ENSGT00950000183211.a.a.b ENSGT00940000153866.B ENSGT00940000156501 ENSGT00940000158257 ENSGT00390000018598 ENSGT00390000003044.i ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139.k #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000155365.b ENSGT00940000154258.b #35 ENSGT00390000002200.a.a #34 ENSGT00940000159716.a #33 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606.b #29 ENSGT00940000153875.d.b #31 ENSGT00940000159191 #32 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 73 ENSTMTG00000016087 ENSTMTG00000016035 ENSTMTG00000015978 ENSTMTG00000015964 ENSTMTG00000015957 ENSTMTG00000015946 ENSTMTG00000015726 ENSTMTG00000015672 ENSTMTG00000015640 ENSTMTG00000015624 ENSTMTG00000014668 ENSTMTG00000014576 ENSTMTG00000014567 ENSTMTG00000014554 ENSTMTG00000014511 #21 ENSTMTG00000014492 #22 ENSTMTG00000013562 #23 ENSTMTG00000013445 #24 ENSTMTG00000013416 #25 ENSTMTG00000013377 #20 ENSTMTG00000013366 ENSTMTG00000013361 ENSTMTG00000013335 #35 ENSTMTG00000013319 #34 ENSTMTG00000013306 #33 ENSTMTG00000009989 #26 Three-toed box turtle MODERN SPECIES 74 ENSTMTG00000007136 ENSTMTG00000007118 ENSTMTG00000007071 ENSTMTG00000007034 ENSTMTG00000007027 ENSTMTG00000007023 ENSTMTG00000006979 ENSTMTG00000006931 ENSTMTG00000006863 ENSTMTG00000006846 ENSTMTG00000005571 ENSTMTG00000005470 ENSTMTG00000005461 ENSTMTG00000005442 ENSTMTG00000005375 #21 ENSTMTG00000005351 #22 ENSTMTG00000005315 #23 ENSTMTG00000005206 #24 ENSTMTG00000005180 #25 ENSTMTG00000005166 #25 ENSTMTG00000005148 #20 ENSTMTG00000005093 ENSTMTG00000005069 ENSTMTG00000005030 #35 ENSTMTG00000005013 #34 ENSTMTG00000004963 #33 ENSTMTG00000003995 #26 painted turtle MODERN SPECIES 932 COG4 (ENSCPBG00000015859) ENSCPBG00000015857 SF3B3 (ENSCPBG00000015853) ENSCPBG00000015852 PARD6A (ENSCPBG00000015850) ENKD1 (ENSCPBG00000015849) GFOD2 (ENSCPBG00000015847) RANBP10 (ENSCPBG00000015845) ENSCPBG00000015844 ENSCPBG00000015842 NUTF2 (ENSCPBG00000015840) EDC4 (ENSCPBG00000015685) NRN1L (ENSCPBG00000015652) PSKH1 (ENSCPBG00000015651) CTRL (ENSCPBG00000015649) E2F4 (ENSCPBG00000015647) #22 ELMO3 (ENSCPBG00000015646) #23 ENSCPBG00000015644 #24 TMEM208 (ENSCPBG00000015638) #25 MATCAP1 (ENSCPBG00000015636) #20 LCAT (ENSCPBG00000015633) ENSCPBG00000015631 ENSCPBG00000015629 #35 ENSCPBG00000015627 #34 Testudinidae ANCESTRAL SPECIES 17 ENSGT00940000168336 ENSGT00950000183211.a.a.b ENSGT00940000153866.B ENSGT00940000156501 ENSGT00940000158257 ENSGT00990000212499 ENSGT00940000165060 ENSGT00390000003044.j ENSGT00390000003044.i ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139.k #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000155365.b ENSGT00940000154258.b #35 ENSGT00390000002200.a.a #34 ENSGT00940000159716 #33 ENSGT00940000160212 #26 ENSGT00940000159190 #27 ENSGT00940000158845 #28 ENSGT00390000007606.b #29 ENSGT00940000175932.a ENSGT00940000153875.d.b #31 Abingdon island giant tortoise MODERN SPECIES 1348 ENSCABG00000003986 ENSCABG00000003977 CENPT (ENSCABG00000003969) NUTF2 (ENSCABG00000003964) EDC4 (ENSCABG00000003958) NRN1L (ENSCABG00000003954) PSKH1 (ENSCABG00000003952) CTRL (ENSCABG00000003947) EXOC3L1 (ENSCABG00000003898) #21 E2F4 (ENSCABG00000003886) #22 ELMO3 (ENSCABG00000003870) #23 ENSCABG00000003865 #24 TMEM208 (ENSCABG00000003861) #25 MATCAP1 (ENSCABG00000003788) #20 LCAT (ENSCABG00000003777) ENSCABG00000003772 ENSCABG00000003771 AGRP (ENSCABG00000003769) #35 ATP6V0D1 (ENSCABG00000003760) #34 HSD11B2 (ENSCABG00000003728) #33 FHOD1 (ENSCABG00000002823) #26 SLC9A5 (ENSCABG00000002801) #27 ENSCABG00000002797 #28 ENSCABG00000002794 #28 KCTD19 (ENSCABG00000002793) #29 Goode s thornscrub tortoise MODERN SPECIES 3 SF3B3 (ENSGEVG00005018288) ENSGEVG00005018393 PARD6A (ENSGEVG00005018443) ENKD1 (ENSGEVG00005004118) ENSGEVG00005004134 ENSGEVG00005004147 RANBP10 (ENSGEVG00005004172) ENSGEVG00005004200 ENSGEVG00005004224 ENSGEVG00005004251 NUTF2 (ENSGEVG00005004279) EDC4 (ENSGEVG00005004310) NRN1L (ENSGEVG00005004361) PSKH1 (ENSGEVG00005004407) EXOC3L1 (ENSGEVG00005004462) #21 E2F4 (ENSGEVG00005004542) #22 ELMO3 (ENSGEVG00005004591) #23 ENSGEVG00005004626 #24 TMEM208 (ENSGEVG00005004643) #25 MATCAP1 (ENSGEVG00005004672) #20 LCAT (ENSGEVG00005004719) ENSGEVG00005004754 AGRP (ENSGEVG00005004774) #35 ATP6V0D1 (ENSGEVG00005004809) #34 HSD11B2 (ENSGEVG00005004837) #33 FHOD1 (ENSGEVG00005004887) #26 SLC9A5 (ENSGEVG00005004932) #27 PLEKHG4 (ENSGEVG00005005012) #28 ENSGEVG00005005119 #29 ENSGEVG00005005175 #29 ENSGEVG00005005189 Chinese turtle MODERN SPECIES 1440 NDRG4 (ENSPSIG00000004943) SETD6 (ENSPSIG00000005364) CNOT1 (ENSPSIG00000005499) SLC38A7 (ENSPSIG00000006052) ZDHHC1 (ENSPSIG00000006764) #32 TPPP3 (ENSPSIG00000007372) #31 PARD6A (ENSPSIG00000007537) ENKD1 (ENSPSIG00000007590) GFOD2 (ENSPSIG00000007597) RANBP10 (ENSPSIG00000007615) ENSPSIG00000008199 ENSPSIG00000008716 NUTF2 (ENSPSIG00000008982) EDC4 (ENSPSIG00000009211) PSKH1 (ENSPSIG00000009319) E2F4 (ENSPSIG00000009614) #22 ENSPSIG00000001772 TMEM208 (ENSPSIG00000009628) #25 MATCAP1 (ENSPSIG00000009787) #20 LCAT (ENSPSIG00000009855) Archosauria ANCESTRAL SPECIES 65 ENSGT00950000183211.a.a.b ENSGT00940000153866.B ENSGT00940000156501 ENSGT00940000158257 ENSGT00990000212499 ENSGT00940000165060 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 Aves ANCESTRAL SPECIES 67 ENSGT00940000158257 ENSGT00990000212499 ENSGT00940000165060 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 African ostrich MODERN SPECIES 209 RANBP10 (ENSSCUG00000002930) ENSSCUG00000002928 ENSSCUG00000002927 ENSSCUG00000002923 NUTF2 (ENSSCUG00000002921) EDC4 (ENSSCUG00000002898) NRN1L (ENSSCUG00000002889) PSKH1 (ENSSCUG00000002888) EXOC3L1 (ENSSCUG00000002884) #21 E2F4 (ENSSCUG00000002882) #22 ELMO3 (ENSSCUG00000002877) #23 TMEM208 (ENSSCUG00000002874) #25 MATCAP1 (ENSSCUG00000002872) #20 LCAT (ENSSCUG00000002869) Neognathae ANCESTRAL SPECIES 13 ENSGT00940000157894 ENSGT00390000015052.j ENSGT00940000156011 ENSGT01030000235537 ENSGT00990000204304 ENSGT00940000158257 ENSGT00940000165060 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000163363.e.a.b.c.b ENSGT00940000163363.e.a.a.b ENSGT00940000153717.b #36 ENSGT00940000156672 #37 ENSGT00940000161003 ENSGT00390000004877 ENSGT00940000163363.e.a.b.d ENSGT00940000163363.e.a.b.c.a ENSGT00940000166017 ENSGT00940000157335 ENSGT00940000153348.A Neognathae_b ANCESTRAL SPECIES 15 ENSGT00940000157894 ENSGT00390000015052.j ENSGT00940000156011 ENSGT01030000235537 ENSGT01040000241829 ENSGT00940000158257 ENSGT00940000165060 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000163363.e.a.b.c.a ENSGT00940000163363.e.a.a.b ENSGT00940000153717.b #36 ENSGT00940000156672 #37 ENSGT00940000161003 ENSGT00390000004877 ENSGT00940000166017 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00900000141128 ENSGT00940000165483.c Passeriformes ANCESTRAL SPECIES 13 ENSGT00940000157894 ENSGT00390000015052.j ENSGT00940000156011 ENSGT00960000189770 ENSGT00390000006585 ENSGT00390000003044 ENSGT00940000158257 ENSGT00990000204304 ENSGT01030000235537 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000163363.e.a.b.c.a.e ENSGT00940000163363.e.a.b.c.a.f ENSGT00940000163363.e.a.a.b ENSGT00940000153717.b #36 ENSGT00940000156672 #37 ENSGT00940000161003 ENSGT00390000004877 ENSGT00940000166017 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00900000141128 Great tit MODERN SPECIES 2 RSPRY1 (ENSPMJG00000014116) ARL2BP (ENSPMJG00000014117) PLLP (ENSPMJG00000014118) ENSPMJG00000014120 ENSPMJG00000014121 RANBP10 (ENSPMJG00000014123) ENSPMJG00000014127 ENSPMJG00000014129 NUTF2 (ENSPMJG00000014133) ENSPMJG00000014135 EDC4 (ENSPMJG00000014136) NRN1L (ENSPMJG00000014137) PSKH1 (ENSPMJG00000014140) CTRL (ENSPMJG00000014141) EXOC3L1 (ENSPMJG00000014144) #21 E2F4 (ENSPMJG00000014168) #22 ELMO3 (ENSPMJG00000014170) #23 TMEM208 (ENSPMJG00000014181) #25 LCAT (ENSPMJG00000014185) ENSPMJG00000014186 ENSPMJG00000014187 ENSPMJG00000014189 RIPOR1 (ENSPMJG00000014195) #36 CTCF (ENSPMJG00000014214) #37 CARMIL2 (ENSPMJG00000014217) ENSPMJG00000014219 ENSPMJG00000014221 AARS1 (ENSPMJG00000014223) EXOSC6 (ENSPMJG00000014224) ENSPMJG00000014226 ENSPMJG00000014232 Passeriformes_d ANCESTRAL SPECIES 13 ENSGT00940000157894 ENSGT00390000015052.j ENSGT00940000156011 ENSGT00390000006585 ENSGT00390000003044 ENSGT00940000158257 ENSGT01040000241829 ENSGT00990000204304 ENSGT01030000235537 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000163363.e.a.b.c.a.e ENSGT00940000163363.e.a.b.c.a.f.a ENSGT00940000163363.e.a.a.b ENSGT00940000153717.b #36 ENSGT00940000156672 #37 ENSGT00940000161003 ENSGT00390000004877 ENSGT00940000163363.e.a.b.c.a.f.b ENSGT00940000166017 ENSGT00940000157335 ENSGT00940000153348.A Passeriformes_g ANCESTRAL SPECIES 17 ENSGT00940000157894 ENSGT00390000015052.j ENSGT00940000156011 ENSGT00390000006585 ENSGT00390000003044 ENSGT00940000158257 ENSGT01040000241829 ENSGT00990000204304 ENSGT01030000235537 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000163363.e.a.b.c.a.e ENSGT00940000163363.e.a.b.c.a.f.a ENSGT00940000163363.e.a.a.b ENSGT00940000153717.b #36 ENSGT00940000156672 #37 ENSGT00390000004877 ENSGT00940000163363.e.a.b.c.a.f.b ENSGT00940000166017 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00900000141128 Passeroidea ANCESTRAL SPECIES 17 ENSGT00390000015052.j ENSGT00940000156011 ENSGT00960000189770 ENSGT00390000006585 ENSGT00390000003044 ENSGT00940000158257 ENSGT01040000241829 ENSGT00990000204304 ENSGT01030000235537 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000163363.e.a.b.c.a.e ENSGT00940000163363.e.a.b.c.a.f.a ENSGT00940000163363.e.a.a.b ENSGT00940000153717.b #36 ENSGT00940000156672 #37 ENSGT00390000004877 ENSGT00940000163363.e.a.b.c.a.f.b ENSGT00940000166017 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00900000141128 Common canary MODERN SPECIES 14 RSPRY1 (ENSSCAG00000006112) ARL2BP (ENSSCAG00000006104) PLLP (ENSSCAG00000006101) THAP11 (ENSSCAG00000006098) ENSSCAG00000006088 RANBP10 (ENSSCAG00000006066) ENSSCAG00000006055 ENSSCAG00000006050 ENSSCAG00000006045 ENSSCAG00000006043 NUTF2 (ENSSCAG00000006042) EDC4 (ENSSCAG00000006037) PSKH1 (ENSSCAG00000006033) CTRL (ENSSCAG00000006017) EXOC3L1 (ENSSCAG00000006010) #21 E2F4 (ENSSCAG00000006003) #22 ELMO3 (ENSSCAG00000005985) #23 LCAT (ENSSCAG00000005959) ENSSCAG00000005936 ENSSCAG00000005913 ENSSCAG00000005904 RIPOR1 (ENSSCAG00000005842) #36 CTCF (ENSSCAG00000005818) #37 ENSSCAG00000005809 AARS1 (ENSSCAG00000005799) ENSSCAG00000005796 ENSSCAG00000005792 ZDHHC1 (ENSSCAG00000005790) #32 TPPP3 (ENSSCAG00000005787) #31 PLEKHG4 (ENSSCAG00000005782) #28 SLC9A5 (ENSSCAG00000005773) #27 Zebra finch MODERN SPECIES 2 PSME3IP1 (ENSTGUG00000005173) RSPRY1 (ENSTGUG00000005197) ARL2BP (ENSTGUG00000005238) PLLP (ENSTGUG00000005247) ENSTGUG00000023133 ENSTGUG00000026335 RANBP10 (ENSTGUG00000005262) ENSTGUG00000019972 ENSTGUG00000024320 NUTF2 (ENSTGUG00000028608) EDC4 (ENSTGUG00000005312) NRN1L (ENSTGUG00000022742) PSKH1 (ENSTGUG00000028925) CTRL (ENSTGUG00000005352) EXOC3L1 (ENSTGUG00000005376) #21 E2F4 (ENSTGUG00000005417) #22 TMEM208 (ENSTGUG00000005504) #25 MATCAP1 (ENSTGUG00000005512) #20 LCAT (ENSTGUG00000005519) ENSTGUG00000005554 ENSTGUG00000005564 RIPOR1 (ENSTGUG00000005594) #36 CTCF (ENSTGUG00000005603) #37 ENSTGUG00000005680 ENSTGUG00000024972 ENSTGUG00000029449 AARS1 (ENSTGUG00000005683) EXOSC6 (ENSTGUG00000020155) ENSTGUG00000005736 ENSTGUG00000005749 ZDHHC1 (ENSTGUG00000005755) #32 Medium ground finch MODERN SPECIES 46 CPNE2 (ENSGFOG00000012046) PSME3IP1 (ENSGFOG00000012040) RSPRY1 (ENSGFOG00000012036) ARL2BP (ENSGFOG00000012029) PLLP (ENSGFOG00000012023) ENSGFOG00000012016 RANBP10 (ENSGFOG00000012002) ENSGFOG00000011996 ENSGFOG00000011994 ENSGFOG00000011991 NUTF2 (ENSGFOG00000011984) EDC4 (ENSGFOG00000011633) PSKH1 (ENSGFOG00000011543) CTRL (ENSGFOG00000011519) EXOC3L1 (ENSGFOG00000011493) #21 E2F4 (ENSGFOG00000011476) #22 ELMO3 (ENSGFOG00000011458) #23 TMEM208 (ENSGFOG00000011442) #25 LCAT (ENSGFOG00000011433) ENSGFOG00000011407 ENSGFOG00000011394 ENSGFOG00000011387 RIPOR1 (ENSGFOG00000011363) #36 CTCF (ENSGFOG00000011352) #37 ENSGFOG00000011344 ENSGFOG00000011339 ENSGFOG00000011286 AARS1 (ENSGFOG00000011273) ENSGFOG00000011266 ENSGFOG00000011264 ZDHHC1 (ENSGFOG00000011261) #32 Flycatcher MODERN SPECIES 2 ARL2BP (ENSFALG00000007012) PLLP (ENSFALG00000007017) THAP11 (ENSFALG00000024324) ENSFALG00000007027 ENSFALG00000027277 ENSFALG00000007031 ENSFALG00000023054 ENSFALG00000023954 ENSFALG00000028922 ENSFALG00000007051 NUTF2 (ENSFALG00000028610) EDC4 (ENSFALG00000007060) PSKH1 (ENSFALG00000007063) CTRL (ENSFALG00000007067) EXOC3L1 (ENSFALG00000007076) #21 E2F4 (ENSFALG00000007077) #22 ELMO3 (ENSFALG00000007082) #23 TMEM208 (ENSFALG00000007048) #25 ENSFALG00000024408 #20 ENSFALG00000007104 ENSFALG00000024685 ENSFALG00000025252 ENSFALG00000025850 ENSFALG00000007110 ENSFALG00000007123 RIPOR1 (ENSFALG00000007138) #36 CTCF (ENSFALG00000007163) #37 CARMIL2 (ENSFALG00000007174) ENSFALG00000023290 ENSFALG00000007194 ENSFALG00000007196 Neognathae_c ANCESTRAL SPECIES 18 ENSGT00940000157894 ENSGT00390000015052.j ENSGT00940000156011 ENSGT01030000235537 ENSGT01040000241829 ENSGT00940000158257 ENSGT00940000165060 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000163363.e.a.b.c.a ENSGT00940000163363.e.a.a.b ENSGT00940000153717.b #36 ENSGT00940000156672 #37 ENSGT00940000161003 ENSGT00390000004877 ENSGT00940000166017 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00900000141128 ENSGT00940000165483.c Kakapo DUPLICATION Kakapo MODERN SPECIES 4 ENSSHBG00005000077 ENSSHBG00005000067 ENSSHBG00005000059 ENSSHBG00005000057 ENSSHBG00005000042 ENSSHBG00005000034 ENSSHBG00005000016 ENSSHBG00005019748 ENSSHBG00005019731 ENSSHBG00005019719 ENSSHBG00005019712 ENSSHBG00005019703 ENSSHBG00005019698 ENSSHBG00005019695 ENSSHBG00005019162 ENSSHBG00005019101 #22 ENSSHBG00005019095 Kakapo MODERN SPECIES 19 ENSSHBG00005002187 ENSSHBG00005002202 MMP15 (ENSSHBG00005002218) CFAP20 (ENSSHBG00005002228) CSNK2A2 (ENSSHBG00005002239) GINS3 (ENSSHBG00005002255) ENSSHBG00005002274 ENSSHBG00005002309 ENSSHBG00005002327 NUTF2 (ENSSHBG00005002342) ENSSHBG00005002366 NRN1L (ENSSHBG00005002390) PSKH1 (ENSSHBG00005002407) CTRL (ENSSHBG00005002475) EXOC3L1 (ENSSHBG00005002597) #21 ENSSHBG00005002629 #22 ELMO3 (ENSSHBG00005002685) #23 TMEM208 (ENSSHBG00005002747) #25 MATCAP1 (ENSSHBG00005002778) #20 ENSSHBG00005002817 ENSSHBG00005002840 ENSSHBG00005002853 ENSSHBG00005002867 ENSSHBG00005002877 ENSSHBG00005002893 ENSSHBG00005002924 #36 ENSSHBG00005002965 #37 ENSSHBG00005003002 ENSSHBG00005003042 ZDHHC1 (ENSSHBG00005003067) #32 TPPP3 (ENSSHBG00005003086) #31 Golden eagle MODERN SPECIES 25 ARL2BP (ENSACCG00020008127) PLLP (ENSACCG00020008120) ENSACCG00020008110 ENSACCG00020008105 ENSACCG00020008096 RANBP10 (ENSACCG00020008087) ENSACCG00020008068 CENPT (ENSACCG00020008059) ENSACCG00020008051 NUTF2 (ENSACCG00020008042) EDC4 (ENSACCG00020008019) NRN1L (ENSACCG00020008004) PSKH1 (ENSACCG00020007994) CTRL (ENSACCG00020007972) EXOC3L1 (ENSACCG00020007949) #21 E2F4 (ENSACCG00020007936) #22 ELMO3 (ENSACCG00020007906) #23 TMEM208 (ENSACCG00020007881) #25 MATCAP1 (ENSACCG00020007867) #20 LCAT (ENSACCG00020003807) ENSACCG00020003787 ENSACCG00020003771 RIPOR1 (ENSACCG00020003680) #36 CTCF (ENSACCG00020003584) #37 CARMIL2 (ENSACCG00020003558) ENSACCG00020003524 ENSACCG00020003495 ENSACCG00020003450 AARS1 (ENSACCG00020003404) EXOSC6 (ENSACCG00020003376) ENSACCG00020003337 Galloanserae ANCESTRAL SPECIES 12 ENSGT00940000157894 ENSGT00390000015052.j ENSGT00940000156011 ENSGT01030000235537 ENSGT00990000204304 ENSGT00940000158257 ENSGT00940000165060 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000163363.e.a.b.d ENSGT00940000163363.e.a.a.b ENSGT00940000153717.b #36 ENSGT00940000156672 #37 ENSGT00940000161003 ENSGT00390000004877 ENSGT00940000166017 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00900000141128 ENSGT00940000165483.c Anatidae ANCESTRAL SPECIES 44 ENSGT00940000157894 ENSGT00390000015052.j ENSGT00940000156011 ENSGT01030000235537 ENSGT01030000238340 ENSGT00940000158257 ENSGT00940000165060 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000163363.e.a.b.d ENSGT00940000163363.e.a.a.b ENSGT00940000153717.b #36 ENSGT00940000156672 #37 ENSGT00940000161003 ENSGT00390000004877 ENSGT00940000166017 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00900000141128 ENSGT00940000165483.c Duck MODERN SPECIES 3470 EXOC3L1 (ENSAPLG00000005428) #21 ENSAPLG00000023922 #22 ELMO3 (ENSAPLG00000005842) #23 Pink-footed goose MODERN SPECIES 28 ARL2BP (ENSABRG00000006397) PLLP (ENSABRG00000006367) ENSABRG00000006353 ENSABRG00000006350 ENSABRG00000006339 RANBP10 (ENSABRG00000006142) ENSABRG00000006098 CENPT (ENSABRG00000006074) THAP11 (ENSABRG00000006069) NUTF2 (ENSABRG00000006063) EDC4 (ENSABRG00000004784) NRN1L (ENSABRG00000004644) PSKH1 (ENSABRG00000004618) CTRL (ENSABRG00000004597) EXOC3L1 (ENSABRG00000004552) #21 E2F4 (ENSABRG00000004516) #22 ELMO3 (ENSABRG00000004359) #23 TMEM208 (ENSABRG00000004312) #25 MATCAP1 (ENSABRG00000004297) #20 LCAT (ENSABRG00000004284) ENSABRG00000004281 ENSABRG00000004245 ENSABRG00000004233 RIPOR1 (ENSABRG00000004192) #36 CTCF (ENSABRG00000004166) #37 CARMIL2 (ENSABRG00000004070) ENSABRG00000004051 ENSABRG00000003948 AARS1 (ENSABRG00000003899) EXOSC6 (ENSABRG00000003869) ENSABRG00000003864 Phasianidae ANCESTRAL SPECIES 12 ENSGT00940000157894 ENSGT00390000015052.j ENSGT00940000156011 ENSGT01030000235537 ENSGT00990000204304 ENSGT00940000158257 ENSGT00940000165060 ENSGT00390000003044 ENSGT00390000006585 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000163363.e.a.b.d.c ENSGT00940000163363.e.a.b.d.d.b ENSGT00940000163363.e.a.a.b ENSGT00940000153717.b #36 ENSGT00940000156672 #37 ENSGT00940000161003 ENSGT00390000004877 ENSGT00940000163363.e.a.b.d.d.a ENSGT00940000166017 ENSGT00940000157335 ENSGT00940000153348.A Japanese quail MODERN SPECIES 2 ARL2BP (ENSCJPG00005012011) ENSCJPG00005012010 PLLP (ENSCJPG00005012007) ENSCJPG00005012004 ENSCJPG00005012002 RANBP10 (ENSCJPG00005012001) ENSCJPG00005011967 CENPT (ENSCJPG00005011965) THAP11 (ENSCJPG00005011962) NUTF2 (ENSCJPG00005011960) EDC4 (ENSCJPG00005011956) NRN1L (ENSCJPG00005011955) PSKH1 (ENSCJPG00005011954) CTRL (ENSCJPG00005011950) EXOC3L1 (ENSCJPG00005011949) #21 E2F4 (ENSCJPG00005011947) #22 ELMO3 (ENSCJPG00005011622) #23 TMEM208 (ENSCJPG00005011621) #25 MATCAP1 (ENSCJPG00005011614) #20 LCAT (ENSCJPG00005011612) ENSCJPG00005011600 ENSCJPG00005011599 ENSCJPG00005011598 CTCF (ENSCJPG00005011570) #37 CARMIL2 (ENSCJPG00005011565) ENSCJPG00005011564 ENSCJPG00005011559 AARS1 (ENSCJPG00005011326) EXOSC6 (ENSCJPG00005011324) ENSCJPG00005011321 ZDHHC1 (ENSCJPG00005011314) #32 Phasianidae_b ANCESTRAL SPECIES 14 ENSGT00940000157894 ENSGT00390000015052.j ENSGT00940000156011 ENSGT01100000263482.F ENSGT00990000204304 ENSGT00940000158257 ENSGT00940000165060 ENSGT00390000003044 ENSGT00960000189770 ENSGT00510000047030 ENSGT00510000047791 ENSGT00530000063853.a.b ENSGT00940000157041.a ENSGT00940000154494.b ENSGT01030000234613.a.b #21 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000004417.b #20 ENSGT00940000160052 ENSGT00940000163363.e.a.b.d.c ENSGT00940000163363.e.a.a.b ENSGT00940000153717.b #36 ENSGT00940000156672 #37 ENSGT00940000161003 ENSGT00390000004877 ENSGT00940000163363.e.a.b.d.d.a ENSGT00940000166017 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00900000141128 Chicken MODERN SPECIES 2 ARL2BP (ENSGALG00010025800) ENSGALG00010022176 PLLP (ENSGALG00010022180) CX3CL1 (ENSGALG00010022202) CCL17 (ENSGALG00010022208) RANBP10 (ENSGALG00010021798) ENSGALG00010021831 CENPT (ENSGALG00010021841) ENSGALG00010021853 NUTF2 (ENSGALG00010021887) EDC4 (ENSGALG00010021908) NRN1L (ENSGALG00010021924) PSKH1 (ENSGALG00010021951) CTRL (ENSGALG00010022092) EXOC3L1 (ENSGALG00010022104) #21 E2F4 (ENSGALG00010022115) #22 ELMO3 (ENSGALG00010022129) #23 TMEM208 (ENSGALG00010022142) #25 MATCAP1 (ENSGALG00010022143) #20 LCAT (ENSGALG00010022401) ENSGALG00010022479 ENSGALG00010025870 ENSGALG00010022509 RIPOR1 (ENSGALG00010022571) #36 CTCF (ENSGALG00010022627) #37 CARMIL2 (ENSGALG00010022652) ENSGALG00010022666 ENSGALG00010022500 ENSGALG00010022676 AARS1 (ENSGALG00010021722) EXOSC6 (ENSGALG00010025438) Turkey DUPLICATION Turkey MODERN SPECIES 4 ENSMGAG00000017254 #31 ENSMGAG00000018186 #32 ENSMGAG00000002326 ENSMGAG00000002038 ENSMGAG00000002365 ENSMGAG00000002145 ENSMGAG00000002200 #37 ENSMGAG00000002253 #36 ENSMGAG00000002293 ENSMGAG00000002344 ENSMGAG00000002310 ENSMGAG00000002421 ENSMGAG00000002386 #25 ENSMGAG00000002377 #20 ELMO3 (ENSMGAG00000002446) #23 ENSMGAG00000021267 #22 ENSMGAG00000002517 #22 ENSMGAG00000002634 ENSMGAG00000002599 ENSMGAG00000002565 #21 ENSMGAG00000017751 ENSMGAG00000002644 ENSMGAG00000002707 ENSMGAG00000020886 ENSMGAG00000002744 ENSMGAG00000022142 ENSMGAG00000002741 ENSMGAG00000002787 ENSMGAG00000002773 ENSMGAG00000002760 RSPRY1 (ENSMGAG00000002807) Turkey MODERN SPECIES 4 ENSMGAG00000018186 #32 ENSMGAG00000002326 ENSMGAG00000002038 ENSMGAG00000002365 ENSMGAG00000002145 ENSMGAG00000002200 #37 ENSMGAG00000002253 #36 ENSMGAG00000002293 ENSMGAG00000002344 ENSMGAG00000002310 ENSMGAG00000002421 ENSMGAG00000002386 #25 ENSMGAG00000002377 #20 ELMO3 (ENSMGAG00000002446) #23 ENSMGAG00000021267 #22 ENSMGAG00000002517 #22 ENSMGAG00000002634 ENSMGAG00000002599 ENSMGAG00000002565 #21 ENSMGAG00000017751 ENSMGAG00000002644 ENSMGAG00000002707 ENSMGAG00000020886 ENSMGAG00000002744 ENSMGAG00000022142 ENSMGAG00000002741 ENSMGAG00000002787 ENSMGAG00000002773 ENSMGAG00000002760 RSPRY1 (ENSMGAG00000002807) ENSMGAG00000002881 Anura ANCESTRAL SPECIES 64 ENSGT00940000165986 ENSGT00940000160052 ENSGT00940000158705 ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00390000008139 #25 ENSGT00390000008749.f ENSGT01030000234613.a.b #21 ENSGT00390000004417.b #20 ENSGT00390000011417 ENSGT00390000009328 ENSGT00950000183100.A ENSGT00940000160143 ENSGT00730000110960.a.b ENSGT00940000160843 ENSGT00940000156038.b.a ENSGT00390000004913 ENSGT00940000157918 ENSGT00940000154022.a.a Frog MODERN SPECIES 4 mcoln3 (ENSXETG00000008633) dnai3 (ENSXETG00000008630) syde2 (ENSXETG00000008629) bcl10 (ENSXETG00000003096) ddah1 (ENSXETG00000047913) ccn1 (ENSXETG00000003094) znhit6 (ENSXETG00000037309) col24a1 (ENSXETG00000003092) ENSXETG00000044401 odf2l (ENSXETG00000003090) clca2 (ENSXETG00000003088) ano10l (ENSXETG00000033689) lcat (ENSXETG00000003085) ENSXETG00000035261 ldhd (ENSXETG00000031980) e2f4 (ENSXETG00000003083) #22 elmo3 (ENSXETG00000013823) #23 usp1 (ENSXETG00000013819) tmem208 (ENSXETG00000033520) #25 anln (ENSXETG00000039411) exoc3l1 (ENSXETG00000013799) #21 kiaa0895l (ENSXETG00000013796) #20 usb1 (ENSXETG00000013795) setd6 (ENSXETG00000013793) ciapin1 (ENSXETG00000013788) coq9 (ENSXETG00000025042) polr2c (ENSXETG00000013784) dok4 (ENSXETG00000013782) ccdc102a (ENSXETG00000013779) ADGRG1 (ENSXETG00000013764) zpd (ENSXETG00000013767) Coelacanth MODERN SPECIES 895 ENSLACG00000005953 ENSLACG00000007440 E2F4 (ENSLACG00000010977) #22 ELMO3 (ENSLACG00000012363) #23 ENSLACG00000013406 #24 ENSLACG00000014135 Actinopterygii ANCESTRAL SPECIES 334 ENSGT00730000111180 ENSGT00940000159257 ENSGT00390000005651 ENSGT00940000156907 ENSGT00940000164239 ENSGT00940000163578 ENSGT00940000157414 ENSGT00940000163301 ENSGT00940000156252 #22 ENSGT00940000157353 ENSGT00390000015564 Reedfish MODERN SPECIES 17 RNF166 (ENSECRG00000011541) ENSECRG00000011522 ENSECRG00000011334 ENSECRG00000011024 ciao2b (ENSECRG00000010965) #10 ENSECRG00000010960 ENSECRG00000010954 rrad (ENSECRG00000010946) #9 ENSECRG00000010942 pdp2 (ENSECRG00000010937) #7 ENSECRG00000010932 ca7 (ENSECRG00000010927) nae1 (ENSECRG00000010916) ENSECRG00000010904 ENSECRG00000010895 e2f4 (ENSECRG00000010886) #22 ELMO3 (ENSECRG00000010877) #23 ENSECRG00000010868 #24 ENSECRG00000008541 ENSECRG00000008079 ENSECRG00000008040 katnb1 (ENSECRG00000008005) tmem208 (ENSECRG00000007985) #25 ENSECRG00000005824 MMP15 (ENSECRG00000005587) zpd (ENSECRG00000005577) slc7a6os (ENSECRG00000005567) slc7a6 (ENSECRG00000005558) ENSECRG00000005542 adgrg1 (ENSECRG00000005521) ccdc102a (ENSECRG00000005500) Neopterygii ANCESTRAL SPECIES 22 ENSGT00950000183131.b.b ENSGT00940000163228 ENSGT00940000161773 ENSGT00950000182991.A.a.c.b ENSGT00950000183108.b.a.a ENSGT00950000183082.a ENSGT00940000154294 ENSGT00630000089910 ENSGT00940000158945 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00390000014869 ENSGT00940000153577.C ENSGT00940000163301.c.a ENSGT00940000163301.c.b ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000157918 ENSGT00940000154022.a.a ENSGT00940000162283 ENSGT00940000156939 ENSGT00940000167365 ENSGT00390000015672 ENSGT00940000158295 ENSGT00940000156113 ENSGT00940000154285.b.a.a.b ENSGT00730000110960.b ENSGT00940000160143 ENSGT00390000008385 Spotted gar MODERN SPECIES 662 mbtps1 (ENSLOCG00000006637) SLC38A8 (ENSLOCG00000006623) necab2 (ENSLOCG00000006599) hydin (ENSLOCG00000006542) cmtr2 (ENSLOCG00000017595) pnp6 (ENSLOCG00000006511) calb2a (ENSLOCG00000006495) got2a (ENSLOCG00000006474) ENSLOCG00000006435 slc38a7 (ENSLOCG00000006410) ENSLOCG00000006377 si:ch211-122f10.4 (ENSLOCG00000006351) cnot1 (ENSLOCG00000006324) setd6 (ENSLOCG00000006305) si:dkey-286h2.3 (ENSLOCG00000006287) e2f4 (ENSLOCG00000006277) #22 ELMO3 (ENSLOCG00000006255) #23 ENSLOCG00000006224 #24 tmem208 (ENSLOCG00000006204) #25 katnb1 (ENSLOCG00000006166) KIFC3 (ENSLOCG00000006130) ENSLOCG00000006113 MMP15 (ENSLOCG00000006100) ENSLOCG00000006072 ENSLOCG00000006054 ENSLOCG00000006041 ENSLOCG00000006022 slc7a6 (ENSLOCG00000005997) ENSLOCG00000005977 ENSLOCG00000005960 ccdc102a (ENSLOCG00000005943) Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000157764.f ENSGT00950000183131.b.b ENSGT00940000163228 ENSGT00950000183108.b.a.a.i.a ENSGT00940000161773 ENSGT00950000182991.A.a.c.b ENSGT00950000183108.b.a.a.i.b ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00390000014869 ENSGT00940000153577.C ENSGT00940000163301.c.a ENSGT00940000163301.c.b ENSGT00940000156252 #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000157918 ENSGT00940000154022.a.a ENSGT00940000162283.b ENSGT00940000162283.a ENSGT00940000156939 ENSGT00940000167365 ENSGT00390000015672 ENSGT00940000158295 ENSGT00940000156113 ENSGT00940000154285.b.a.a.b ENSGT00730000110960.b ENSGT00940000160143 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES ENSGT00940000156252.nb #22 Asian bonytongue MODERN SPECIES 1 emc9 (ENSSFOG00015004271) c1ql3b (ENSSFOG00015004293) pter (ENSSFOG00015004311) ENSSFOG00015032431 ENSSFOG00015004332 ripk2 (ENSSFOG00015004367) ENSSFOG00015004400 ENSSFOG00015032802 MMP16 (ENSSFOG00015004454) WWP1 (ENSSFOG00015004487) ENSSFOG00015004513 ##34 snx16 (ENSSFOG00015027809) ENSSFOG00015004575 LRRCC1 (ENSSFOG00015004630) ENSSFOG00015029287 ENSSFOG00015004733 #22 cahz (ENSSFOG00015004758) ENSSFOG00015004792 ENSSFOG00015004848 ENSSFOG00015032218 ENSSFOG00015004825 ENSSFOG00015004865 ENSSFOG00015004882 or91a1 (ENSSFOG00015027266) ppme1 (ENSSFOG00015004914) C2CD3 (ENSSFOG00015004970) ENSSFOG00015004983 ube2g1a (ENSSFOG00015004998) camkk1b (ENSSFOG00015027840) ENSSFOG00015005013 psmd8 (ENSSFOG00015005032) Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 26 ENSGT00490000043404 ENSGT00390000006658.b ENSGT00940000157764.f ENSGT00950000183131.b.b.a ENSGT00940000163228 ENSGT00940000161773 ENSGT00950000182991.A.a.c.b.c ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000154294 ENSGT00880000138014.a ENSGT00390000014869 ENSGT00940000153577.C ENSGT00940000163301.c.a ENSGT00940000156252.ob.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00390000008139 #25 ENSGT00940000157918 ENSGT00940000154022.a.a.n ENSGT00940000162283.a ENSGT00940000156939.g ENSGT00940000158295 ENSGT00730000110960.b ENSGT00940000160143 ENSGT00390000008385 ENSGT00950000183156.a.a.b ENSGT00940000164020.b ENSGT00530000063023.A.a.j ENSGT00490000043434 Asian bonytongue MODERN SPECIES 22 edc4 (ENSSFOG00015014372) NRN1L (ENSSFOG00015014466) pskh1 (ENSSFOG00015014477) mbtps1 (ENSSFOG00015014494) OSGIN1 (ENSSFOG00015014542) SLC38A8 (ENSSFOG00015014609) necab2 (ENSSFOG00015014647) hydin (ENSSFOG00015033190) cmtr2 (ENSSFOG00015028047) pnp6 (ENSSFOG00015017494) CALB2 (ENSSFOG00015017521) ENSSFOG00015017567 cnot1 (ENSSFOG00015017614) setd6 (ENSSFOG00015017688) si:dkey-286h2.3 (ENSSFOG00015017746) e2f4 (ENSSFOG00015017784) #22 ELMO3 (ENSSFOG00015017838) #23 ENSSFOG00015017929 #24 tmem208 (ENSSFOG00015017960) #25 KIFC3 (ENSSFOG00015018005) ENSSFOG00015018090 MMP15 (ENSSFOG00015018155) katnb1 (ENSSFOG00015018207) slc7a6 (ENSSFOG00015018261) ccdc102a (ENSSFOG00015018299) DOK4 (ENSSFOG00015018326) IFT74 (ENSSFOG00015028634) vac14 (ENSSFOG00015018367) mtss1la (ENSSFOG00015018457) ENSSFOG00015018512 DPY19L3 (ENSSFOG00015018564) P. kingsleyae MODERN SPECIES 23 ENSPKIG00000000935 pskh1 (ENSPKIG00000000919) mbtps1 (ENSPKIG00000000838) OSGIN1 (ENSPKIG00000000797) SLC38A8 (ENSPKIG00000000773) necab2 (ENSPKIG00000000740) hydin (ENSPKIG00000000601) cmtr2 (ENSPKIG00000023749) pnp6 (ENSPKIG00000023736) calb2b (ENSPKIG00000023716) ENSPKIG00000023683 ENSPKIG00000023666 cnot1 (ENSPKIG00000023538) setd6 (ENSPKIG00000023460) si:dkey-286h2.3 (ENSPKIG00000023336) e2f4 (ENSPKIG00000023286) #22 ENSPKIG00000023273 ELMO3 (ENSPKIG00000023256) #23 ENSPKIG00000023243 #24 tmem208 (ENSPKIG00000023228) #25 katnb1 (ENSPKIG00000023208) KIFC3 (ENSPKIG00000023180) ENSPKIG00000023155 MMP15 (ENSPKIG00000023125) slc7a6 (ENSPKIG00000023084) ccdc102a (ENSPKIG00000023041) Osteoglossiformes ANCESTRAL SPECIES 131 ENSGT00940000174693.d ENSGT00940000156501 ENSGT00390000003044 ENSGT00390000006585.b ENSGT00510000047030.d.d ENSGT00510000047791.g ENSGT00530000063853.a.b.a ENSGT00940000158494 ENSGT00940000157764.e.a ENSGT00950000183131.b.b.b ENSGT00950000182991.A.a.c.b.d ENSGT00950000183108.b.a.a.j ENSGT00940000158136 ENSGT00940000156252.ob.b #22 ENSGT00940000154022.a.a.m ENSGT00940000162283.b ENSGT00940000156939.h ENSGT00940000166567 ENSGT00940000167365 ENSGT00390000015672 ENSGT00940000156113 ENSGT00940000154285.b.a.a.b ENSGT00950000183156.a.a.a ENSGT00940000164020.a ENSGT00530000063023.A.a.i ENSGT00950000183051.b.a.a ENSGT00940000156397.a.a.o ENSGT00390000002362 ENSGT00940000156256 P. kingsleyae MODERN SPECIES 10 ENSPKIG00000002135 edc4 (ENSPKIG00000002209) NRN1L (ENSPKIG00000002345) ENSPKIG00000002381 SLC38A8 (ENSPKIG00000002452) NECAB2 (ENSPKIG00000002529) ENSPKIG00000002557 pnp6 (ENSPKIG00000002570) CALB2 (ENSPKIG00000002590) GOT2 (ENSPKIG00000002625) ENSPKIG00000002676 slc38a7 (ENSPKIG00000002694) ENSPKIG00000002753 si:ch211-122f10.4 (ENSPKIG00000002800) cnot1 (ENSPKIG00000002914) e2f4 (ENSPKIG00000003228) #22 ENSPKIG00000003274 ENSPKIG00000003285 ENSPKIG00000003295 KIFC3 (ENSPKIG00000003347) ENSPKIG00000003461 MMP15 (ENSPKIG00000003509) ENSPKIG00000003570 zpd (ENSPKIG00000003623) slc7a6os (ENSPKIG00000003646) ENSPKIG00000003679 adgrg1 (ENSPKIG00000003742) DOK4 (ENSPKIG00000003786) mtss1la (ENSPKIG00000003850) ENSPKIG00000003930 DPY19L3 (ENSPKIG00000004045) Asian bonytongue MODERN SPECIES ENSSFOG00015010969 ENSSFOG00015010955 NUTF2 (ENSSFOG00015010919) edc4 (ENSSFOG00015010819) NRN1L (ENSSFOG00015028953) ENSSFOG00015010776 ENSSFOG00015010754 SLC38A8 (ENSSFOG00015031580) ENSSFOG00015010710 pnp6 (ENSSFOG00015010688) calb2a (ENSSFOG00015010665) got2a (ENSSFOG00015005990) slc38a7 (ENSSFOG00015016162) ENSSFOG00015015676 si:ch211-122f10.4 (ENSSFOG00015015578) e2f4 (ENSSFOG00015015554) #22 ENSSFOG00015015543 ENSSFOG00015030986 ENSSFOG00015032328 KIFC3 (ENSSFOG00015015376) ENSSFOG00015015146 MMP15 (ENSSFOG00015015101) ENSSFOG00015015088 zpd (ENSSFOG00015015067) slc7a6os (ENSSFOG00015030815) ENSSFOG00015030328 ENSSFOG00015015021 adgrg1 (ENSSFOG00015015001) CCDC102A (ENSSFOG00015014984) ENSSFOG00015014973 ENSSFOG00015014949 Clupeocephala DUPLICATION Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 31 ENSGT00950000183113.b.b.c.a ENSGT00390000010825.b ENSGT00940000160161.f ENSGT00940000160161.e.b ENSGT00390000006865 ENSGT00940000166363 ENSGT00390000010229 ENSGT00940000157821.h.b ENSGT00940000163946.b ENSGT00940000155180.b.a ENSGT00940000158039.g ENSGT00390000014869 ENSGT00940000153577.C ENSGT00940000163301.c.a.b ENSGT00940000163301.c.b ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000008385 ENSGT00940000155456.f ENSGT00390000015889 ENSGT00610000087446 ENSGT00390000018603 ENSGT00390000007975.a.b.b ENSGT00940000157523.g.b ENSGT00940000168725 ENSGT00950000182839.A.d.a.a ENSGT00950000182956.b.b.a.a.c.b Otomorpha ANCESTRAL SPECIES 168 ENSGT00940000166237 ENSGT00940000166757 ENSGT00950000183113.b.b.c.a ENSGT00390000010825.b ENSGT00940000160161.f ENSGT00940000160161.e.b ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000010229 ENSGT00940000179145 ENSGT00940000155180.b.a ENSGT00940000158039.g ENSGT00390000014869 ENSGT00940000153577.C ENSGT00940000163301.c.b ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000008385 ENSGT00940000155456.f ENSGT00390000015889 ENSGT00610000087446 ENSGT00390000018603 ENSGT00390000007975.a.b.b ENSGT00940000157523.g.b Otophysi ANCESTRAL SPECIES 19 ENSGT00940000166237 ENSGT00940000166757 ENSGT00950000183113.b.b.d ENSGT00390000010825.b ENSGT00940000160161.f ENSGT00940000160161.e.b ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000010229 ENSGT00940000179145 ENSGT00940000155180.b.a ENSGT00940000158039.g ENSGT00390000014869 ENSGT00940000153577.C ENSGT00940000163301.c.b ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000008385 ENSGT00940000155456.f ENSGT00390000015889 ENSGT00610000087446 ENSGT01100000264346 ENSGT00390000007975.a.b.b ENSGT00940000157523.g.b ENSGT00390000015016 ENSGT00500000044938 ENSGT00730000111039.C Characiphysae ANCESTRAL SPECIES 44 ENSGT00940000166757 ENSGT00950000183113.b.b.d ENSGT00390000010825.b ENSGT00940000160161.f ENSGT00940000160161.e.b ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000010229 ENSGT00990000212066 ENSGT00940000163946.b ENSGT00940000155180.b.a ENSGT00940000158039.g ENSGT00390000014869 ENSGT00940000153577.C ENSGT00940000163301.c.b ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000008385 ENSGT00940000155456.f ENSGT00390000015889 ENSGT00610000087446 ENSGT01100000264346 ENSGT00390000007975.a.b.b ENSGT00940000157523.g.b ENSGT00390000015016 ENSGT00500000044938 ENSGT00730000111039.C Characiphysae_b ANCESTRAL SPECIES 62 ENSGT00940000166757 ENSGT00950000183113.b.b.d ENSGT00390000010825.b ENSGT00940000160161.e.b ENSGT00390000006865 ENSGT00940000159401.d ENSGT00940000153414.A ENSGT00390000010229 ENSGT00940000157821.h.a.f ENSGT00940000163946.b ENSGT00940000155180.b.a ENSGT00940000158039.g ENSGT00390000014869 ENSGT00940000153577.C ENSGT00940000163301.c.b ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00390000008385 ENSGT00940000155456.f ENSGT00390000015889 ENSGT00610000087446 ENSGT01100000264346 ENSGT00390000007975.a.b.b ENSGT00940000157523.g.b ENSGT00390000015016 ENSGT00500000044938 ENSGT00730000111039.C ENSGT00940000157538.f Characoidei ANCESTRAL SPECIES 191 ENSGT00940000163301.c.b.g.b.a ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00390000008385 ENSGT00940000155456.f ENSGT00390000015889 ENSGT00610000087446 ENSGT01100000264346 ENSGT00390000007975.a.b.b ENSGT00940000157523.g.b ENSGT00390000015016 ENSGT00500000044938 ENSGT00730000111039.C ENSGT00940000166588 Red-bellied piranha MODERN SPECIES 567 ENSPNAG00000012544 met (ENSPNAG00000012568) ENSPNAG00000002314 ENSPNAG00000012611 ENSPNAG00000012625 e2f4 (ENSPNAG00000002352) #22 ELMO3 (ENSPNAG00000012765) #23 ENSPNAG00000012776 #24 ENSPNAG00000012836 MMP15 (ENSPNAG00000002431) vac14 (ENSPNAG00000012941) Mexicana tetra MODERN SPECIES 347 e2f4 (ENSAMXG00000035991) #22 Electric eel MODERN SPECIES 338 kdm7ab (ENSEEEG00000006590) cnot1 (ENSEEEG00000006603) setd6 (ENSEEEG00000006612) ENSEEEG00000006616 ENSEEEG00000007114 ENSEEEG00000007115 e2f4 (ENSEEEG00000007138) #22 ELMO3 (ENSEEEG00000007162) #23 ENSEEEG00000007820 #24 ENSEEEG00000007823 MMP15 (ENSEEEG00000007825) vac14 (ENSEEEG00000007831) galnt18a (ENSEEEG00000007836) zgc:162634 (ENSEEEG00000007838) ENSEEEG00000007839 btbd10a (ENSEEEG00000007842) bmal1a (ENSEEEG00000007852) borcs5 (ENSEEEG00000007953) zgc:103499 (ENSEEEG00000007955) cep290 (ENSEEEG00000007958) TMTC3 (ENSEEEG00000007962) kitlga (ENSEEEG00000007963) Cyprinoidei ANCESTRAL SPECIES 75 ENSGT00940000166757 ENSGT00950000183113.b.b.d ENSGT00390000010825.b ENSGT00940000160161.e.b ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000010229 ENSGT00940000157821.h.a.f ENSGT00940000163946.b ENSGT00940000155180.b.a ENSGT00940000158039.g ENSGT00390000014869 ENSGT00940000153577.C ENSGT00940000163301.c.b.b ENSGT00940000163301.c.b.a ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT01030000234583.a.a.c.b.b.c.b ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000008385 ENSGT00940000155456.f ENSGT00390000015889.t ENSGT01100000264346 ENSGT00390000007975.a.b.b ENSGT00940000157523.g.b ENSGT00390000015016 ENSGT00500000044938 ENSGT00730000111039.C Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 108 ENSGT00950000183113.b.b.d.a ENSGT00390000010825.b.a ENSGT00940000160161.e.b.b ENSGT00390000006865.c ENSGT00940000159401.d.f ENSGT00390000010229.b ENSGT00950000182914.b.ob.b ENSGT00940000157821.h.a.f.a ENSGT00940000163946.b.a ENSGT00940000155180.b.a.h ENSGT00940000158039.g.b ENSGT00390000014869.r.b ENSGT00940000153577.C.f ENSGT00940000163301.c.b.b.a ENSGT00940000163301.c.b.a.a ENSGT00940000156252.pb.a.a.a #22 ENSGT00940000159455.g #23 ENSGT00940000160637.h #24 ENSGT00940000162283.a.a.a ENSGT00940000156939.f.a ENSGT00940000167365.h ENSGT00390000008385.c ENSGT00940000155456.f.b ENSGT00390000015889.t ENSGT00390000018603.c ENSGT00390000007975.a.b.b.b ENSGT00940000157523.g.b.e.a ENSGT00390000015016.a ENSGT00500000044938.p ENSGT00730000111039.C ENSGT00940000157538.f.a.b Cyprininae_a ANCESTRAL SPECIES 46 ENSGT00950000183113.b.b.d.a ENSGT00390000010825.b.a ENSGT00940000160161.e.b.b ENSGT00390000006865.c ENSGT00940000159401.d.f ENSGT00390000010229.b ENSGT00950000182914.b.ob.b ENSGT00940000157821.h.a.f.a ENSGT00940000163946.b.a ENSGT00940000155180.b.a.h ENSGT00940000158039.g.b ENSGT00390000014869.r.b ENSGT00940000153577.C.f ENSGT00940000163301.c.b.b.a ENSGT00940000163301.c.b.a.a ENSGT00940000156252.pb.a.a.a #22 ENSGT00940000159455.g #23 ENSGT00940000160637.h #24 ENSGT00940000162283.a.a.a ENSGT00940000156939.f.a ENSGT00940000167365.h ENSGT00390000008385.c ENSGT00940000155456.f.b ENSGT00390000015889.t ENSGT00610000087446 ENSGT00390000018603.c ENSGT00390000007975.a.b.b.b ENSGT00940000157523.g.b.e.a ENSGT00390000015016.a ENSGT00500000044938.p ENSGT00730000111039.C Common carp reference MODERN SPECIES 33 ada2a (ENSCCRG00000023673) ribc2 (ENSCCRG00000025352) GALNT8 (ENSCCRG00000023664) NDUFA9 (ENSCCRG00000075222) DYRK4 (ENSCCRG00000019853) zgc:154077 (ENSCCRG00000073581) zgc:77158 (ENSCCRG00000046345) fgf6a (ENSCCRG00000059260) tigara (ENSCCRG00000046350) ccnd2a (ENSCCRG00000055672) kdm7ab (ENSCCRG00000046451) cnot1 (ENSCCRG00000046459) setd6 (ENSCCRG00000046514) ENSCCRG00000057257 cyp2x9 (ENSCCRG00000079699) e2f4 (ENSCCRG00000082106) #22 ENSCCRG00000046544 #23 ENSCCRG00000046558 #24 ENSCCRG00000055942 ENSCCRG00000059892 zpd (ENSCCRG00000038510) vac14 (ENSCCRG00000036577) galnt18a (ENSCCRG00000036456) zgc:162634 (ENSCCRG00000036445) ENSCCRG00000053061 btbd10a (ENSCCRG00000062455) bmal1a (ENSCCRG00000038879) borcs5 (ENSCCRG00000039763) zgc:103499 (ENSCCRG00000038860) ENSCCRG00000025040 cep290 (ENSCCRG00000050699) Goldfish MODERN SPECIES 45 ENSCARG00000067771 rhcgb (ENSCARG00000067821) ENSCARG00000068192 tph1a (ENSCARG00000068432) ENSCARG00000069039 kcnc1b (ENSCARG00000069057) dhtkd1 (ENSCARG00000069122) ENSCARG00000069220 dkk3b (ENSCARG00000069222) far1 (ENSCARG00000069236) ENSCARG00000069270 PPFIBP2 (ENSCARG00000069340) kdm7ab (ENSCARG00000069587) cnot1 (ENSCARG00000069596) cyp2x9 (ENSCARG00000069622) e2f4 (ENSCARG00000069634) #22 ELMO3 (ENSCARG00000069640) #23 ENSCARG00000069646 #24 ENSCARG00000069677 MMP15 (ENSCARG00000069789) vac14 (ENSCARG00000069823) galnt18a (ENSCARG00000069901) zgc:162634 (ENSCARG00000069907) btbd10a (ENSCARG00000069909) bmal1a (ENSCARG00000069955) borcs5 (ENSCARG00000070027) zgc:103499 (ENSCARG00000070035) cep290 (ENSCARG00000070057) TMTC3 (ENSCARG00000070095) ENSCARG00000070111 dusp6 (ENSCARG00000070124) Cyprininae ANCESTRAL SPECIES 303 ENSGT00940000160161.e.b.a.a ENSGT00390000006865.d ENSGT00940000159401.d.e ENSGT00390000010229.a ENSGT00950000182914.b.ob.a ENSGT00940000157821.h.a.f.b ENSGT00940000163946.b.b ENSGT00940000155180.b.a.g ENSGT00940000158039.g.a ENSGT00390000014869.r.a ENSGT00940000153577.C.e ENSGT00940000163301.c.b.b.b ENSGT00940000163301.c.b.a.b ENSGT00940000156252.pb.a.b #22 ENSGT00940000159455.h.b #23 ENSGT00940000156252.pb.a.a.b #22 ENSGT00940000159455.h.a #23 ENSGT00940000160637.g #24 ENSGT01030000234583.a.a.c.b.b.c.b ENSGT00940000162283.a.a.b ENSGT00940000156939.f.b ENSGT00940000167365.g ENSGT00390000008385.d ENSGT00940000155456.f.a ENSGT00390000015889.s ENSGT00610000087446 ENSGT01100000264346 ENSGT00390000007975.a.b.b.a ENSGT00940000157523.g.b.e.b ENSGT00390000015016.b ENSGT00500000044938.o Goldfish MODERN SPECIES 17 samm50 (ENSCARG00000010088) LRTM2 (ENSCARG00000010075) ENSCARG00000010062 ENSCARG00000010053 cav1 (ENSCARG00000010039) cav2 (ENSCARG00000010029) tes (ENSCARG00000010012) cpa1 (ENSCARG00000009717) cep41 (ENSCARG00000009673) poc1b (ENSCARG00000009095) kdm7ab (ENSCARG00000009026) cnot1 (ENSCARG00000008876) setd6 (ENSCARG00000008807) ENSCARG00000008609 e2f4 (ENSCARG00000008569) #22 e2f4 (ENSCARG00000008555) #22 ELMO3 (ENSCARG00000005496) #23 ENSCARG00000005327 #24 ENSCARG00000004300 MMP15 (ENSCARG00000004169) zpd (ENSCARG00000004154) vac14 (ENSCARG00000004066) galnt18a (ENSCARG00000003893) PYURF (ENSCARG00000003842) PIGY (ENSCARG00000003821) ENSCARG00000003808 btbd10a (ENSCARG00000047665) bmal1a (ENSCARG00000046635) borcs5 (ENSCARG00000046548) zgc:103499 (ENSCARG00000046500) TMTC3 (ENSCARG00000046450) Cyprininae_a ANCESTRAL SPECIES ENSGT00940000156252.pb.a.a.b #22 Golden-line barbel MODERN SPECIES 30 ada2a (ENSSGRG00000052238) ENSSGRG00000052236 GALNT8 (ENSSGRG00000052235) DYRK4 (ENSSGRG00000052209) zgc:154077 (ENSSGRG00000052198) zgc:77158 (ENSSGRG00000052196) fgf6a (ENSSGRG00000052187) tigara (ENSSGRG00000052186) ccnd2a (ENSSGRG00000052185) kdm7ab (ENSSGRG00000052178) ENSSGRG00000052173 cnot1 (ENSSGRG00000051210) setd6 (ENSSGRG00000051177) ENSSGRG00000051103 cyp2x9 (ENSSGRG00000051097) e2f4 (ENSSGRG00000051094) #22 ELMO3 (ENSSGRG00000051080) #23 ENSSGRG00000051079 #24 ENSSGRG00000051062 MMP15 (ENSSGRG00000051054) zpd (ENSSGRG00000051050) vac14 (ENSSGRG00000050870) galnt18a (ENSSGRG00000050863) ENSSGRG00000050861 PIGY (ENSSGRG00000050860) pth1a (ENSSGRG00000050858) btbd10a (ENSSGRG00000050851) BMAL1 (ENSSGRG00000050810) zgc:103499 (ENSSGRG00000050801) ENSSGRG00000050797 ENSSGRG00000050710 Cyprininae ANCESTRAL SPECIES 303 ENSGT00950000183113.b.b.d.b ENSGT00390000010825.b.b ENSGT00940000160161.e.b.a.a ENSGT00390000006865.d ENSGT00940000159401.d.e ENSGT00390000010229.a ENSGT00950000182914.b.ob.a ENSGT00940000157821.h.a.f.b ENSGT00940000163946.b.b ENSGT00940000155180.b.a.g ENSGT00940000158039.g.a ENSGT00390000014869.r.a ENSGT00940000153577.C.e ENSGT00940000163301.c.b.b.b ENSGT00940000163301.c.b.a.b ENSGT00940000156252.pb.a.b #22 ENSGT00940000159455.h.b #23 ENSGT00940000156252.pb.a.a.b #22 ENSGT00940000159455.h.a #23 ENSGT00940000160637.g #24 ENSGT01030000234583.a.a.c.b.b.c.b ENSGT00940000162283.a.a.b ENSGT00940000156939.f.b ENSGT00940000167365.g ENSGT00390000008385.d ENSGT00940000155456.f.a ENSGT00390000015889.s ENSGT00610000087446 ENSGT01100000264346 ENSGT00390000007975.a.b.b.a ENSGT00940000157523.g.b.e.b Goldfish DUPLICATION Goldfish MODERN SPECIES 1828 cyp2x9 (ENSCARG00000050831) e2f4 (ENSCARG00000050851) #22 Goldfish MODERN SPECIES 17 ENSCARG00000010127 samm50 (ENSCARG00000010088) LRTM2 (ENSCARG00000010075) ENSCARG00000010062 ENSCARG00000010053 cav1 (ENSCARG00000010039) cav2 (ENSCARG00000010029) tes (ENSCARG00000010012) cpa1 (ENSCARG00000009717) cep41 (ENSCARG00000009673) poc1b (ENSCARG00000009095) kdm7ab (ENSCARG00000009026) cnot1 (ENSCARG00000008876) setd6 (ENSCARG00000008807) ENSCARG00000008609 e2f4 (ENSCARG00000008569) #22 e2f4 (ENSCARG00000008555) #22 ELMO3 (ENSCARG00000005496) #23 ENSCARG00000005327 #24 ENSCARG00000004300 MMP15 (ENSCARG00000004169) zpd (ENSCARG00000004154) vac14 (ENSCARG00000004066) galnt18a (ENSCARG00000003893) PYURF (ENSCARG00000003842) PIGY (ENSCARG00000003821) ENSCARG00000003808 btbd10a (ENSCARG00000047665) bmal1a (ENSCARG00000046635) borcs5 (ENSCARG00000046548) zgc:103499 (ENSCARG00000046500) Cyprininae_a ANCESTRAL SPECIES 73 ENSGT00950000183113.b.b.d.b ENSGT00390000010825.b.b ENSGT00940000160161.e.b.a.a ENSGT00390000006865.d ENSGT00940000159401.d.e ENSGT00390000010229.a ENSGT00950000182914.b.ob.a ENSGT00940000157821.h.a.f.b ENSGT00940000179145 ENSGT00940000155180.b.a.g ENSGT00940000158039.g.a ENSGT00390000014869.r.a ENSGT00940000153577.C.e ENSGT00940000163301.c.b.b.b ENSGT00940000163301.c.b.a.b ENSGT00940000156252.pb.a.b #22 ENSGT00940000159455.h.a #23 ENSGT00940000160637.g #24 ENSGT01030000234583.a.a.c.b.b.c.b.a ENSGT00940000162283.a.a.b ENSGT00940000156939.f.b ENSGT00940000167365.g ENSGT00390000008385.d ENSGT00940000155456.f.a ENSGT00390000007975.a.b.b.a ENSGT00940000157523.g.b.e.b ENSGT00390000015016.b ENSGT00500000044938.o ENSGT00940000157538.f.a.a ENSGT00390000018272.i.c ENSGT00940000158342.b.e Common carp reference MODERN SPECIES 37 ENSCCRG00000025343 ada2a (ENSCCRG00000025347) GALNT8 (ENSCCRG00000061012) NDUFA9 (ENSCCRG00000019905) DYRK4 (ENSCCRG00000019807) zgc:154077 (ENSCCRG00000019718) zgc:77158 (ENSCCRG00000020798) fgf6a (ENSCCRG00000046320) ENSCCRG00000046328 ccnd2a (ENSCCRG00000079203) kdm7ab (ENSCCRG00000046106) cnot1 (ENSCCRG00000046160) setd6 (ENSCCRG00000030549) ENSCCRG00000057245 cyp2x9 (ENSCCRG00000077307) e2f4 (ENSCCRG00000030565) #22 ENSCCRG00000030577 #23 ENSCCRG00000030638 #24 trim35-40 (ENSCCRG00000024641) ENSCCRG00000063612 ENSCCRG00000024685 zpd (ENSCCRG00000024688) vac14 (ENSCCRG00000024701) galnt18a (ENSCCRG00000018850) ENSCCRG00000053903 pth1a (ENSCCRG00000070549) btbd10a (ENSCCRG00000074745) bmal1a (ENSCCRG00000036467) borcs5 (ENSCCRG00000038864) zgc:103499 (ENSCCRG00000076025) TMTC3 (ENSCCRG00000032596) Golden-line barbel MODERN SPECIES 29 ENSSGRG00000037046 ribc2 (ENSSGRG00000037079) GALNT8 (ENSSGRG00000037080) DYRK4 (ENSSGRG00000037093) zgc:154077 (ENSSGRG00000037425) zgc:77158 (ENSSGRG00000037464) fgf6a (ENSSGRG00000037465) ENSSGRG00000037466 tigara (ENSSGRG00000037467) ccnd2a (ENSSGRG00000037468) kdm7ab (ENSSGRG00000037470) cnot1 (ENSSGRG00000037492) setd6 (ENSSGRG00000040816) ENSSGRG00000040817 cyp2x9 (ENSSGRG00000040819) e2f4 (ENSSGRG00000040820) #22 ENSSGRG00000040822 #23 ENSSGRG00000040824 #23 ENSSGRG00000040859 #24 trim35-40 (ENSSGRG00000040860) trim35-40 (ENSSGRG00000040862) MMP15 (ENSSGRG00000041981) zpd (ENSSGRG00000041987) vac14 (ENSSGRG00000042017) galnt18a (ENSSGRG00000042660) zgc:162634 (ENSSGRG00000042661) pth1a (ENSSGRG00000042662) btbd10a (ENSSGRG00000042663) bmal1a (ENSSGRG00000042694) borcs5 (ENSSGRG00000042704) zgc:103499 (ENSSGRG00000042705) Zebrafish MODERN SPECIES 17 GALNT8 (ENSDARG00000115940) ndufa9a (ENSDARG00000070723) DYRK4 (ENSDARG00000070734) C25H12orf4 (ENSDARG00000060987) zgc:77158 (ENSDARG00000013784) fgf6a (ENSDARG00000009351) tigara (ENSDARG00000051749) ccnd2a (ENSDARG00000051748) kdm7ab (ENSDARG00000018559) cnot1 (ENSDARG00000004174) setd6 (ENSDARG00000043986) cyp2x6 (ENSDARG00000079653) cyp2x7 (ENSDARG00000044002) cyp2x8 (ENSDARG00000043997) cyp2x9 (ENSDARG00000070775) e2f4 (ENSDARG00000101578) #22 ELMO3 (ENSDARG00000042126) #23 ENSDARG00000076425 #24 trim35-40 (ENSDARG00000042116) ENSDARG00000042107 MMP15 (ENSDARG00000051962) zpd (ENSDARG00000051959) vac14 (ENSDARG00000014303) galnt18a (ENSDARG00000100889) PYURF (ENSDARG00000045773) ENSDARG00000097203 pth1a (ENSDARG00000093738) btbd10a (ENSDARG00000062674) bmal1a (ENSDARG00000006791) borcs5 (ENSDARG00000077830) C25H12orf29 (ENSDARG00000045785) Clupeiformes ANCESTRAL SPECIES 188 ENSGT00390000015016 ENSGT00940000157633 ENSGT00940000160121 ENSGT00390000002730.e.a ENSGT00940000166237 ENSGT00940000166757 ENSGT00950000183113.b.b.c.a ENSGT00390000010825.b ENSGT00390000006865 ENSGT00390000010229 ENSGT00940000155180.b.a ENSGT00940000158039.g ENSGT00390000014869 ENSGT00940000153577.C ENSGT00940000163301.c.a.b ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000008385 ENSGT00940000155456.f ENSGT00390000015889 ENSGT00390000018603 ENSGT00390000007975.a.b.b ENSGT00940000157523.g.b Denticle herring MODERN SPECIES 8 ADA2 (ENSDCDG00000033907) ribc2 (ENSDCDG00000033904) ndufa9a (ENSDCDG00000033882) DYRK4 (ENSDCDG00000033810) zgc:154077 (ENSDCDG00000033796) zgc:77158 (ENSDCDG00000033795) FGF6 (ENSDCDG00000033792) ccnd2a (ENSDCDG00000033786) kdm7ab (ENSDCDG00000033763) cnot1 (ENSDCDG00000033608) setd6 (ENSDCDG00000033601) ENSDCDG00000033400 ENSDCDG00000033368 ENSDCDG00000032960 ENSDCDG00000032918 e2f4 (ENSDCDG00000032891) #22 ELMO3 (ENSDCDG00000032606) #23 ENSDCDG00000032600 #24 ENSDCDG00000032581 MMP15 (ENSDCDG00000032566) zpd (ENSDCDG00000032554) vac14 (ENSDCDG00000032535) galnt18a (ENSDCDG00000032499) zgc:162634 (ENSDCDG00000032497) ENSDCDG00000032496 btbd10a (ENSDCDG00000032475) bmal1a (ENSDCDG00000032101) rpgrip1l (ENSDCDG00000032071) irx3b (ENSDCDG00000032068) ENSDCDG00000032066 ENSDCDG00000032065 Euteleosteomorpha ANCESTRAL SPECIES 20 ENSGT00390000010825.b ENSGT00940000160161.f ENSGT00940000160161.e.b ENSGT00390000006865 ENSGT00940000166363 ENSGT00390000010229 ENSGT00940000157821.h.b ENSGT00940000163946.b ENSGT00940000157821.g ENSGT00940000155180.b.a ENSGT00940000158039.g ENSGT00390000014869 ENSGT00940000153577.C ENSGT00940000163301.c.a.b ENSGT00940000163301.c.b ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000008385 ENSGT00940000155456.f ENSGT00390000015889 ENSGT00610000087446 ENSGT00390000018603 ENSGT00390000007975.a.b.b ENSGT00940000157523.g.b ENSGT00940000168725 ENSGT00950000182839.A.d.a.a ENSGT00950000182956.b.b.a.a.c.b Protacanthopterygii ANCESTRAL SPECIES 29 ENSGT00940000160360 ENSGT00390000010825.b ENSGT00940000160161.f ENSGT00940000160161.e.b ENSGT00390000006865 ENSGT00940000159401.d.c ENSGT00390000010229 ENSGT00940000157821.g ENSGT00980000200297 ENSGT00940000163946.b ENSGT00940000155180.b.a ENSGT00940000158039.g ENSGT00390000014869 ENSGT00940000153577.C ENSGT00940000163301.c.b ENSGT00940000156252.pb.a #22 ENSGT00940000159455.e #23 ENSGT00940000159455.f #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000008385 ENSGT00940000155456.f ENSGT00390000015889 ENSGT00610000087446 ENSGT00390000018603 ENSGT00390000007975.a.b.b ENSGT00940000157523.g.b ENSGT00940000168725 ENSGT00950000182839.A.d.a.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 148 ENSGT00390000010825.b.c ENSGT00940000160161.f ENSGT00940000160161.e.b ENSGT00390000006865.a ENSGT00940000159401.d.c.b ENSGT00390000010229.d ENSGT00950000182914.b.gb.b ENSGT00940000157821.g.b ENSGT00980000200297.a ENSGT00940000163946.b ENSGT00940000155180.b.a.a.a ENSGT00940000158039.g.d ENSGT00390000014869.s.a ENSGT00940000153577.C ENSGT00940000163301.c.a.b ENSGT00940000156252.pb.a.c #22 ENSGT00940000159455.f #23 Salmoninae_a ANCESTRAL SPECIES 13 ENSGT00390000010825.b.c ENSGT00940000160161.f ENSGT00940000160161.e.b ENSGT00390000006865.a ENSGT00940000159401.d.c.b ENSGT00940000175357 ENSGT00390000010229.d ENSGT00950000182914.b.gb.b ENSGT00940000157821.g.b ENSGT00980000200297.a ENSGT00940000163946.b ENSGT00940000155180.b.a.a.a ENSGT00940000158039.g.d ENSGT00390000014869.s.a ENSGT00940000153577.C ENSGT00940000156252.pb.a.c #22 ENSGT00940000159455.f #23 ENSGT00940000160637.b #24 ENSGT00940000162283.a.c ENSGT00940000156939.f.c ENSGT00940000167365 ENSGT00940000155456.f.c ENSGT00610000087446 ENSGT00390000018603.e.b ENSGT00390000007975.a.b.b.c ENSGT00940000157523.g.b.c ENSGT00940000168725 ENSGT00950000182839.A.d.a.a.c ENSGT00950000182956.b.b.a.a.c.b.f ENSGT00950000183194.a.b.e.b.a ENSGT00940000158780.e.d Salmo ANCESTRAL SPECIES 136 ENSGT00940000157791 ENSGT01010000222294.c.b.b.b.c.a.a.a.a.b ENSGT00390000006367.d.f ENSGT00390000000221.A.d ENSGT00940000158780.e.d ENSGT00950000183194.a.b.e.b.a ENSGT00950000182956.b.b.a.a.c.b.f ENSGT00950000182839.A.d.a.a.c ENSGT00940000168725 ENSGT00940000157523.g.b.c ENSGT00390000007975.a.b.b.c ENSGT00390000018603.e.b ENSGT00610000087446 ENSGT00940000155456.f.c ENSGT00940000163301.c.b.j ENSGT00940000156252.pb.a.c #22 ENSGT00940000159455.f #23 ENSGT00940000160637.b #24 ENSGT00940000162283.a.c River trout MODERN SPECIES 37 ENSSTUG00000012691 far1 (ENSSTUG00000012662) dkk3b (ENSSTUG00000012647) mical2b (ENSSTUG00000012205) PARVA (ENSSTUG00000012167) tead1a (ENSSTUG00000011930) RASSF10 (ENSSTUG00000011900) ENSSTUG00000011879 bmal1a (ENSSTUG00000011505) ENSSTUG00000011489 btbd10a (ENSSTUG00000011418) pth1a (ENSSTUG00000011388) PIGY (ENSSTUG00000011382) ENSSTUG00000011369 galnt18a (ENSSTUG00000011288) e2f4 (ENSSTUG00000011272) #22 ELMO3 (ENSSTUG00000011113) #23 ENSSTUG00000011085 #24 ENSSTUG00000011083 ENSSTUG00000010759 MMP15 (ENSSTUG00000010686) zpd (ENSSTUG00000010668) ENSSTUG00000010662 zpd (ENSSTUG00000010645) ENSSTUG00000010635 zpd (ENSSTUG00000010603) ENSSTUG00000010594 setd6 (ENSSTUG00000010542) cnot1 (ENSSTUG00000001769) kdm7ab (ENSSTUG00000001457) ccnd2a (ENSSTUG00000001424) Atlantic salmon MODERN SPECIES 1 ENSSSAG00000108273 ENSSSAG00000117212 dkk3b (ENSSSAG00000004029) mical2b (ENSSSAG00000004008) PARVA (ENSSSAG00000066724) tead1a (ENSSSAG00000065374) RASSF10 (ENSSSAG00000094274) ENSSSAG00000065345 bmal1a (ENSSSAG00000063495) btbd10a (ENSSSAG00000063424) pth1a (ENSSSAG00000100979) zgc:162634 (ENSSSAG00000083980) galnt18a (ENSSSAG00000063358) ENSSSAG00000098911 ENSSSAG00000063332 e2f4 (ENSSSAG00000063327) #22 ENSSSAG00000104056 ENSSSAG00000055585 #24 ENSSSAG00000055770 #23 ENSSSAG00000054426 ENSSSAG00000054178 ENSSSAG00000101745 ENSSSAG00000112360 zpd (ENSSSAG00000108501) ENSSSAG00000100745 setd6 (ENSSSAG00000054133) cnot1 (ENSSSAG00000092539) kdm7ab (ENSSSAG00000016788) ENSSSAG00000109025 ccnd2a (ENSSSAG00000095730) tigara (ENSSSAG00000095383) Oncorhynchus ANCESTRAL SPECIES 10 ENSGT00390000010825.b.c ENSGT00940000160161.f ENSGT00940000160161.e.b ENSGT00390000006865.a ENSGT00940000159401.d.c.b ENSGT00940000175357 ENSGT00390000010229.d ENSGT00950000182914.b.gb.b ENSGT00940000157821.g.b ENSGT00980000200297.a ENSGT00940000163946.b ENSGT00940000155180.b.a.a.a ENSGT00940000158039.g.d ENSGT00390000014869.s.a ENSGT00940000153577.C ENSGT00940000156252.pb.a.c #22 ENSGT00940000159455.f #23 ENSGT00940000160637.b #24 ENSGT00940000162283.a.c ENSGT00940000167365 ENSGT00390000008385.h ENSGT00940000155456.f.c ENSGT00390000015889.u ENSGT00610000087446 ENSGT00390000018603.e.a.b ENSGT00390000007975.a.b.b.c ENSGT00940000157523.g.b.c ENSGT00940000168725 ENSGT00950000182839.A.d.a.a.c ENSGT00950000182956.b.b.a.a.c.b.f ENSGT00950000183194.a.b.e.b.a Rainbow trout MODERN SPECIES 11 ENSOMYG00000020684 DYRK4 (ENSOMYG00000020935) ENSOMYG00000021018 zgc:154077 (ENSOMYG00000021051) zgc:77158 (ENSOMYG00000021106) FGF6 (ENSOMYG00000021118) ENSOMYG00000021133 tigara (ENSOMYG00000021148) ccnd2a (ENSOMYG00000021154) ENSOMYG00000059617 ENSOMYG00000067100 kdm7ab (ENSOMYG00000021229) cnot1 (ENSOMYG00000021468) setd6 (ENSOMYG00000021597) ENSOMYG00000049411 e2f4 (ENSOMYG00000021646) #22 ENSOMYG00000021694 #23 ENSOMYG00000066883 ENSOMYG00000021757 #24 zpd (ENSOMYG00000066479) galnt18a (ENSOMYG00000021773) ENSOMYG00000058595 zgc:162634 (ENSOMYG00000021788) zgc:162634 (ENSOMYG00000068403) pth1a (ENSOMYG00000021803) btbd10a (ENSOMYG00000021817) bmal1a (ENSOMYG00000021996) ENSOMYG00000022944 RASSF10 (ENSOMYG00000022979) tead1a (ENSOMYG00000023075) mical2b (ENSOMYG00000023356) Oncorhynchus_a ANCESTRAL SPECIES 5 ENSGT00390000010825.b.c ENSGT00940000160161.f ENSGT00940000160161.e.b ENSGT00390000006865.a ENSGT00940000159401.d.c.b ENSGT00940000175357 ENSGT00390000010229.d ENSGT00950000182914.b.gb.b ENSGT00940000157821.g.b ENSGT00980000200297.a ENSGT00940000163946.b ENSGT00940000155180.b.a.a.a ENSGT00940000158039.g.d ENSGT00390000014869.s.a ENSGT00940000153577.C ENSGT00940000156252.pb.a.c #22 ENSGT00940000159455.f #23 ENSGT00940000160637.b #24 ENSGT00940000162283.a.c ENSGT00940000167365 ENSGT00390000008385.h ENSGT00940000155456.f.c ENSGT00390000018603.e.a.b ENSGT00390000007975.a.b.b.c ENSGT00940000157523.g.b.c ENSGT00940000168725 ENSGT00950000182839.A.d.a.a.c ENSGT00950000182956.b.b.a.a.c.b.f ENSGT00950000183194.a.b.e.b.a ENSGT00940000158780.e.d ENSGT00390000000221.A.d Coho salmon MODERN SPECIES 14 ENSOKIG00005016607 ADA2 (ENSOKIG00005016619) GALNT8 (ENSOKIG00005016871) NDUFA9 (ENSOKIG00005016945) DYRK4 (ENSOKIG00005017339) ENSOKIG00005017375 zgc:154077 (ENSOKIG00005017390) zgc:77158 (ENSOKIG00005017424) FGF6 (ENSOKIG00005017431) ENSOKIG00005017460 tigara (ENSOKIG00005017469) ccnd2a (ENSOKIG00005017486) kdm7ab (ENSOKIG00005017523) cnot1 (ENSOKIG00005017728) setd6 (ENSOKIG00005017884) e2f4 (ENSOKIG00005017943) #22 ELMO3 (ENSOKIG00005017967) #23 ENSOKIG00005018081 ENSOKIG00005018088 #24 ENSOKIG00005018183 zpd (ENSOKIG00005019900) ENSOKIG00005019985 galnt18a (ENSOKIG00005019995) pth1a (ENSOKIG00005020020) btbd10a (ENSOKIG00005020031) bmal1a (ENSOKIG00005020138) ENSOKIG00005020293 RASSF10 (ENSOKIG00005020317) tead1a (ENSOKIG00005020347) PARVA (ENSOKIG00005020498) mical2b (ENSOKIG00005020706) Chinook salmon MODERN SPECIES 10 ADA2 (ENSOTSG00005036689) ribc2 (ENSOTSG00005036738) GALNT8 (ENSOTSG00005036740) GALNT8 (ENSOTSG00005036741) NDUFA9 (ENSOTSG00005036746) DYRK4 (ENSOTSG00005036813) zgc:154077 (ENSOTSG00005036816) zgc:77158 (ENSOTSG00005036831) FGF6 (ENSOTSG00005036834) ENSOTSG00005036837 tigara (ENSOTSG00005036840) ccnd2a (ENSOTSG00005036841) kdm7ab (ENSOTSG00005036844) cnot1 (ENSOTSG00005036848) setd6 (ENSOTSG00005036849) e2f4 (ENSOTSG00005036851) #22 ENSOTSG00005036852 ENSOTSG00005036853 ELMO3 (ENSOTSG00005036855) #23 ENSOTSG00005036876 ENSOTSG00005036877 #24 ENSOTSG00005036880 galnt18a (ENSOTSG00005036934) ENSOTSG00005036936 pth1a (ENSOTSG00005036937) btbd10a (ENSOTSG00005036940) bmal1a (ENSOTSG00005036947) ENSOTSG00005037022 RASSF10 (ENSOTSG00005037023) tead1a (ENSOTSG00005037024) mical2b (ENSOTSG00005037104) Huchen MODERN SPECIES 509 cnot1 (ENSHHUG00000015186) setd6 (ENSHHUG00000015464) ENSHHUG00000015497 e2f4 (ENSHHUG00000015501) #22 ENSHHUG00000015510 #23 ELMO3 (ENSHHUG00000015520) #23 ENSHHUG00000015697 ENSHHUG00000015708 MMP15 (ENSHHUG00000015935) zpd (ENSHHUG00000015977) ENSHHUG00000015992 galnt18a (ENSHHUG00000015996) PIGY (ENSHHUG00000016009) pth1a (ENSHHUG00000016015) btbd10a (ENSHHUG00000016017) bmal1a (ENSHHUG00000016041) ENSHHUG00000016815 RASSF10 (ENSHHUG00000016844) ENSHHUG00000016852 Salmoninae ANCESTRAL SPECIES 349 ENSGT00390000010229.c ENSGT00950000182914.b.gb.a ENSGT00940000157821.g.a ENSGT00980000200297.b ENSGT00940000155180.b.a.b ENSGT00940000158039.g.c ENSGT00390000014869.s.b ENSGT00940000163301.c.b ENSGT00940000156252.pb.a.d #22 ENSGT00940000159455.e #23 ENSGT00940000160637.a #24 ENSGT00940000162283.a.d ENSGT00940000156939.f.d ENSGT00940000160637.b #24 ENSGT00940000162283.a.c ENSGT00940000156939.f.c ENSGT00940000167365 ENSGT00390000008385 ENSGT00940000155078.a.b.a.b.g.a.a ENSGT00940000155456.f.d ENSGT00390000015889 ENSGT00390000018603.e.a.a ENSGT00390000007975.a.b.b.d ENSGT00940000157523.g.b.d Salmoninae_a ANCESTRAL SPECIES 1 ENSGT00390000015552.d ENSGT00940000166237.b ENSGT00940000166757.f ENSGT00990000211085 ENSGT00390000010825.b.d ENSGT00390000006865.b ENSGT00940000159401.d.c.a ENSGT00390000010229.c ENSGT00950000182914.b.gb.a ENSGT00940000157821.g.a ENSGT00980000200297.b ENSGT00940000155180.b.a.b ENSGT00940000158039.g.c ENSGT00390000014869.s.b ENSGT00940000163301.c.b ENSGT00940000156252.pb.a.d #22 ENSGT00940000159455.e #23 ENSGT00940000160637.a #24 ENSGT00940000162283.a.d ENSGT00940000156939.f.d ENSGT00390000008385 ENSGT00940000155078.a.b.a.b.g.a.a ENSGT00940000155456.f.d ENSGT00390000015889 ENSGT00390000018603.e.a.a ENSGT00390000007975.a.b.b.d ENSGT00940000157523.g.b.d ENSGT00950000182839.A.d.a.a.d ENSGT00950000182956.b.b.a.a.c.b.e ENSGT00950000183194.a.b.e.b.b ENSGT00940000158780.e.c Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00940000166237.b ENSGT00940000166757.f ENSGT00990000211085 ENSGT00390000010825.b.d ENSGT00390000006865.b ENSGT00940000159401.d.c.a ENSGT00390000010229.c ENSGT00950000182914.b.gb.a ENSGT00940000157821.g.a ENSGT00980000200297.b ENSGT00940000155180.b.a.b ENSGT00940000155180.b.a.a.b ENSGT00940000158039.g.c ENSGT00390000014869.s.b ENSGT00940000163301.c.b ENSGT00940000156252.pb.a.d #22 ENSGT00940000159455.e #23 ENSGT00940000160637.a #24 ENSGT00940000162283.a.d ENSGT00940000156939.f.d ENSGT00390000008385.g ENSGT00940000155078.a.b.a.b.g.a.a ENSGT00940000155456.f.d ENSGT00390000015889.v ENSGT00390000018603.e.a.a ENSGT00390000007975.a.b.b.d ENSGT00940000157523.g.b.d ENSGT00950000182839.A.d.a.a.d ENSGT00950000182956.b.b.a.a.c.b.e ENSGT00950000183194.a.b.e.b.b ENSGT00940000158780.e.c Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00390000015552.d ENSGT00940000166237.b ENSGT00940000166757.f ENSGT00990000211085 ENSGT00390000010825.b.d ENSGT00390000006865.b ENSGT00940000159401.d.c.a ENSGT00390000010229.c ENSGT00950000182914.b.gb.a ENSGT00940000157821.g.a ENSGT00980000200297.b ENSGT00940000155180.b.a.a.b ENSGT00940000158039.g.c ENSGT00390000014869.s.b ENSGT00940000163301.c.b ENSGT00940000156252.pb.a.d #22 ENSGT00940000159455.e #23 ENSGT00940000160637.a #24 ENSGT00940000162283.a.d ENSGT00940000156939.f.d ENSGT00390000008385.g ENSGT00940000155078.a.b.a.b.g.a.a ENSGT00940000155456.f.d ENSGT00390000015889.v ENSGT00390000018603.e.a.a ENSGT00390000007975.a.b.b.d ENSGT00940000157523.g.b.d ENSGT00950000182839.A.d.a.a.d ENSGT00950000182956.b.b.a.a.c.b.e ENSGT00950000183194.a.b.e.b.b ENSGT00940000158780.e.c Coho salmon MODERN SPECIES 24 ENSOKIG00005041944 ENSOKIG00005041976 ENSOKIG00005041991 ribc2 (ENSOKIG00005042023) NDUFA9 (ENSOKIG00005042087) DYRK4 (ENSOKIG00005042443) zgc:154077 (ENSOKIG00005042549) zgc:77158 (ENSOKIG00005042599) FGF6 (ENSOKIG00005042618) ENSOKIG00005042630 ccnd2a (ENSOKIG00005042678) ENSOKIG00005042774 kdm7ab (ENSOKIG00005042816) cnot1 (ENSOKIG00005043098) cyp2x9 (ENSOKIG00005043738) e2f4 (ENSOKIG00005043890) #22 ELMO3 (ENSOKIG00005043942) #23 ENSOKIG00005044397 #24 ENSOKIG00005044464 MMP15 (ENSOKIG00005045608) vac14 (ENSOKIG00005045665) ENSOKIG00005045726 galnt18a (ENSOKIG00005045749) zgc:162634 (ENSOKIG00005045781) pth1a (ENSOKIG00005045798) btbd10a (ENSOKIG00005045822) bmal1a (ENSOKIG00005045944) RASSF10 (ENSOKIG00005046837) tead1a (ENSOKIG00005046864) PARVA (ENSOKIG00005047034) mical2b (ENSOKIG00005047163) Chinook salmon MODERN SPECIES 30 bcl2l13 (ENSOTSG00005042426) ENSOTSG00005042427 ENSOTSG00005042430 ENSOTSG00005042432 ribc2 (ENSOTSG00005042433) NDUFA9 (ENSOTSG00005042438) DYRK4 (ENSOTSG00005042457) zgc:154077 (ENSOTSG00005042459) zgc:77158 (ENSOTSG00005042460) FGF6 (ENSOTSG00005042461) ENSOTSG00005042462 ccnd2a (ENSOTSG00005042464) kdm7ab (ENSOTSG00005042468) cnot1 (ENSOTSG00005042475) cyp2x9 (ENSOTSG00005042709) e2f4 (ENSOTSG00005042916) #22 ELMO3 (ENSOTSG00005042923) #23 ENSOTSG00005043029 #24 ENSOTSG00005043034 MMP15 (ENSOTSG00005044462) vac14 (ENSOTSG00005044647) ENSOTSG00005044648 galnt18a (ENSOTSG00005044649) zgc:162634 (ENSOTSG00005044650) pth1a (ENSOTSG00005044652) btbd10a (ENSOTSG00005044653) bmal1a (ENSOTSG00005044663) RASSF10 (ENSOTSG00005045241) tead1a (ENSOTSG00005045242) PARVA (ENSOTSG00005045260) mical2b (ENSOTSG00005045283) Rainbow trout MODERN SPECIES ENSOMYG00000015354 ENSOMYG00000015375 ribc2 (ENSOMYG00000015396) ndufa9a (ENSOMYG00000015428) DYRK4 (ENSOMYG00000015509) zgc:154077 (ENSOMYG00000015588) zgc:77158 (ENSOMYG00000015615) FGF6 (ENSOMYG00000015620) ENSOMYG00000067551 ccnd2a (ENSOMYG00000015636) ENSOMYG00000016845 kdm7ab (ENSOMYG00000015692) cnot1 (ENSOMYG00000015883) ENSOMYG00000062837 cyp2x9 (ENSOMYG00000016020) e2f4 (ENSOMYG00000016048) #22 ENSOMYG00000016077 #23 ENSOMYG00000016185 #24 ENSOMYG00000016282 ENSOMYG00000018523 vac14 (ENSOMYG00000018621) ENSOMYG00000018676 galnt18a (ENSOMYG00000018715) zgc:162634 (ENSOMYG00000072639) ENSOMYG00000077777 pth1a (ENSOMYG00000018768) btbd10a (ENSOMYG00000018828) bmal1a (ENSOMYG00000019339) ENSOMYG00000020790 ENSOMYG00000059143 RASSF10 (ENSOMYG00000020802) Salmo ANCESTRAL SPECIES 45 ENSGT00940000166237.b ENSGT00940000166757.f ENSGT00990000211085 ENSGT00390000010825.b.d ENSGT00390000006865.b ENSGT00940000159401.d.c.a ENSGT00390000010229.c ENSGT00950000182914.b.gb.a ENSGT00940000157821.g.a ENSGT00980000200297.b ENSGT00940000155180.b.a.b ENSGT00940000158039.g.c ENSGT00390000014869.s.b ENSGT00990000211505 ENSGT00940000163301.c.b.i ENSGT00940000156252.pb.a.d #22 ENSGT00940000159455.e #23 ENSGT00940000160637.a #24 ENSGT00940000162283.a.d ENSGT00940000156939.f.d ENSGT00940000156939.f.c ENSGT00940000167365 ENSGT00390000008385 ENSGT00940000155078.a.b.a.b.g.a.a ENSGT00940000155456.f.d ENSGT00390000015889 ENSGT00390000018603.e.a.a ENSGT00390000007975.a.b.b.d ENSGT00940000157523.g.b.d ENSGT00950000182839.A.d.a.a.d ENSGT00950000182956.b.b.a.a.c.b.e River trout MODERN SPECIES 8 ENSSTUG00000011076 ENSSTUG00000011105 ENSSTUG00000011117 ribc2 (ENSSTUG00000011122) ndufa9a (ENSSTUG00000011134) DYRK4 (ENSSTUG00000011482) zgc:154077 (ENSSTUG00000011673) zgc:77158 (ENSSTUG00000011742) FGF6 (ENSSTUG00000011747) ENSSTUG00000011754 ccnd2a (ENSSTUG00000011758) kdm7ab (ENSSTUG00000011789) cnot1 (ENSSTUG00000011974) ENSSTUG00000012359 cyp2x9 (ENSSTUG00000012398) e2f4 (ENSSTUG00000012866) #22 ELMO3 (ENSSTUG00000012899) #23 ENSSTUG00000013130 #24 MMP15 (ENSSTUG00000013150) vac14 (ENSSTUG00000013289) galnt18a (ENSSTUG00000014533) zgc:162634 (ENSSTUG00000014566) pth1a (ENSSTUG00000014577) btbd10a (ENSSTUG00000014597) bmal1a (ENSSTUG00000014773) RASSF10 (ENSSTUG00000016079) tead1a (ENSSTUG00000016101) PARVA (ENSSTUG00000016399) mical2b (ENSSTUG00000016752) far1 (ENSSTUG00000016897) cyb5r2 (ENSSTUG00000017388) Huchen MODERN SPECIES 3735 cyp2x9 (ENSHHUG00000033281) e2f4 (ENSHHUG00000033407) #22 ELMO3 (ENSHHUG00000033449) #23 Northern pike MODERN SPECIES 18 ndufa9a (ENSELUG00000013561) DYRK4 (ENSELUG00000000503) zgc:154077 (ENSELUG00000013689) zgc:77158 (ENSELUG00000013714) FGF6 (ENSELUG00000034532) ENSELUG00000013733 tigara (ENSELUG00000013785) ccnd2a (ENSELUG00000013828) ENSELUG00000013843 kdm7ab (ENSELUG00000013901) cnot1 (ENSELUG00000014085) setd6 (ENSELUG00000014179) BZW1 (ENSELUG00000031916) setd6 (ENSELUG00000025899) cyp2x9 (ENSELUG00000001209) e2f4 (ENSELUG00000000518) #22 ELMO3 (ENSELUG00000014313) #23 ENSELUG00000014345 #24 MMP15 (ENSELUG00000014493) zpd (ENSELUG00000014513) vac14 (ENSELUG00000014566) galnt18a (ENSELUG00000014626) ENSELUG00000026856 zgc:162634 (ENSELUG00000033189) pth1a (ENSELUG00000014682) btbd10a (ENSELUG00000014765) bmal1a (ENSELUG00000014869) ENSELUG00000014915 RASSF10 (ENSELUG00000014933) tead1a (ENSELUG00000015001) PARVA (ENSELUG00000015051) Acanthomorphata ANCESTRAL SPECIES 334 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 Cod DUPLICATION Cod MODERN SPECIES 22 ENSGMOG00000009719 ENSGMOG00000015301 ENSGMOG00000015244 ENSGMOG00000036125 zgc:154077 (ENSGMOG00000004799) ENSGMOG00000016996 ENSGMOG00000016990 ENSGMOG00000028923 ENSGMOG00000032012 ENSGMOG00000033084 ENSGMOG00000002627 ENSGMOG00000030917 ENSGMOG00000030182 ENSGMOG00000023399 ENSGMOG00000027032 #22 ENSGMOG00000009445 #22 ENSGMOG00000009455 #23 RASSF9 (ENSGMOG00000036984) ENSGMOG00000007917 SLC6A15 (ENSGMOG00000016828) lrrk2 (ENSGMOG00000016854) slc2a13b (ENSGMOG00000016924) KIF21A (ENSGMOG00000016941) ENSGMOG00000015342 ENSGMOG00000003460 ENSGMOG00000003430 ENSGMOG00000003418 ENSGMOG00000023944 ENSGMOG00000003407 ENSGMOG00000013409 hal (ENSGMOG00000010242) Cod MODERN SPECIES 5 ENSGMOG00000025933 ENSGMOG00000002872 ogfod1 (ENSGMOG00000002891) ENSGMOG00000002941 #16 gnao1b (ENSGMOG00000002957) ENSGMOG00000002976 gfod2 (ENSGMOG00000031970) thap11 (ENSGMOG00000022603) nrn1lb (ENSGMOG00000025675) ENSGMOG00000003106 ENSGMOG00000003051 ENSGMOG00000003058 ENSGMOG00000003080 ENSGMOG00000030996 ENSGMOG00000003135 ENSGMOG00000034773 #22 ENSGMOG00000022221 #22 ENSGMOG00000033959 furina (ENSGMOG00000000699) fes (ENSGMOG00000000712) rhcga (ENSGMOG00000000775) kif7 (ENSGMOG00000009645) ENSGMOG00000027253 ENSGMOG00000033280 ENSGMOG00000017502 ENSGMOG00000017455 ENSGMOG00000017449 ENSGMOG00000002943 ENSGMOG00000025350 ENSGMOG00000030712 ENSGMOG00000035094 Euacanthomorphacea ANCESTRAL SPECIES 7 ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000002197 ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT00940000179140 Percomorphaceae ANCESTRAL SPECIES 4 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000002197 ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Tiger tail seahorse MODERN SPECIES 364 ENSHCOG00000013182 ENSHCOG00000000381 ENSHCOG00000013145 DYNC1H1 (ENSHCOG00000013128) tmem30b (ENSHCOG00000013065) kdm1a (ENSHCOG00000013009) ENSHCOG00000012978 PTAFR (ENSHCOG00000012970) ENSHCOG00000012963 ccnd2a (ENSHCOG00000000658) tigara (ENSHCOG00000012938) ENSHCOG00000012927 FGF6 (ENSHCOG00000012911) zgc:77158 (ENSHCOG00000012823) zgc:154077 (ENSHCOG00000012792) e2f4 (ENSHCOG00000012722) #22 ELMO3 (ENSHCOG00000012639) #23 ENSHCOG00000012537 #24 ENSHCOG00000012513 MMP15 (ENSHCOG00000012475) zpd (ENSHCOG00000012459) nup93 (ENSHCOG00000012422) steep1 (ENSHCOG00000012319) mt2 (ENSHCOG00000012314) sc5d (ENSHCOG00000012299) anapc13 (ENSHCOG00000012282) ENSHCOG00000012269 rspry1 (ENSHCOG00000012256) arl2bp (ENSHCOG00000012200) PLLP (ENSHCOG00000012182) ENSHCOG00000012165 Percomorphaceae_B ANCESTRAL SPECIES 5 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Percomorphaceae_C ANCESTRAL SPECIES 5 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Eupercaria ANCESTRAL SPECIES 6 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00690000103139 ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 Tetraodontidae ANCESTRAL SPECIES 31 ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00690000103139 ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967.f.a ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00940000154540.a ENSGT00390000015052 ENSGT00940000156011 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 4 ndufa9a (ENSTNIG00000008801) ENSTNIG00000008802 kcng4a (ENSTNIG00000008803) ENSTNIG00000008804 hsbp1a (ENSTNIG00000008805) ENSTNIG00000008806 mlycd (ENSTNIG00000008807) ENSTNIG00000000623 ENSTNIG00000008808 ccnd2a (ENSTNIG00000008809) tigara (ENSTNIG00000000438) ENSTNIG00000008810 FGF6 (ENSTNIG00000008811) zgc:77158 (ENSTNIG00000008812) zgc:154077 (ENSTNIG00000008813) e2f4 (ENSTNIG00000008814) #22 ELMO3 (ENSTNIG00000008815) #23 ENSTNIG00000008816 #24 ENSTNIG00000008817 ENSTNIG00000008818 MMP15 (ENSTNIG00000008819) zpd (ENSTNIG00000008820) nup93 (ENSTNIG00000008821) steep1 (ENSTNIG00000008822) mt2 (ENSTNIG00000008823) mt2 (ENSTNIG00000008824) rspry1 (ENSTNIG00000008825) rabgef1 (ENSTNIG00000008826) arl2bp (ENSTNIG00000008827) pllp (ENSTNIG00000008828) plcg2 (ENSTNIG00000008829) Tetraodon MODERN SPECIES 26 ENSTNIG00000005213 ENSTNIG00000005202 mettl14 (ENSTNIG00000005201) ENSTNIG00000001384 ENSTNIG00000005198 slc13a4 (ENSTNIG00000005197) ENSTNIG00000005196 ENSTNIG00000005195 ENSTNIG00000005194 ENSTNIG00000005190 ENSTNIG00000005189 ENSTNIG00000005188 ENSTNIG00000005186 ENSTNIG00000005185 zgc:154077 (ENSTNIG00000005171) e2f4 (ENSTNIG00000005170) #22 ENSTNIG00000005169 ENSTNIG00000005168 ENSTNIG00000005167 SLC1A3 (ENSTNIG00000005166) palm1b (ENSTNIG00000005153) ENSTNIG00000005149 ENSTNIG00000005974 ENSTNIG00000005147 ENSTNIG00000005146 slc5a9 (ENSTNIG00000005145) slc5a9 (ENSTNIG00000005144) ENSTNIG00000001619 ENSTNIG00000005143 hoga1 (ENSTNIG00000005132) MORN4 (ENSTNIG00000005131) Fugu MODERN SPECIES 21 slc28a1 (ENSTRUG00000003627) znf592 (ENSTRUG00000003360) ENSTRUG00000019724 kti12 (ENSTRUG00000025780) si:dkey-24l11.2 (ENSTRUG00000021832) ENSTRUG00000029814 ENSTRUG00000033485 ENSTRUG00000031793 ENSTRUG00000027582 ENSTRUG00000028486 tigara (ENSTRUG00000010303) ENSTRUG00000030583 FGF6 (ENSTRUG00000010251) zgc:77158 (ENSTRUG00000010115) zgc:154077 (ENSTRUG00000009930) e2f4 (ENSTRUG00000009757) #22 ELMO3 (ENSTRUG00000009537) #23 ENSTRUG00000022183 #24 ENSTRUG00000009490 MMP15 (ENSTRUG00000031340) zpd (ENSTRUG00000009190) nup93 (ENSTRUG00000008930) steep1 (ENSTRUG00000031082) mt2 (ENSTRUG00000030569) mt2 (ENSTRUG00000020060) anapc13 (ENSTRUG00000030261) ENSTRUG00000020972 rspry1 (ENSTRUG00000008607) rabgef1 (ENSTRUG00000008465) arl2bp (ENSTRUG00000020068) pllp (ENSTRUG00000008233) Eupecaria_A ANCESTRAL SPECIES 7 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00690000103139 ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00950000182967 ENSGT00390000002197 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 Eupecaria_B ANCESTRAL SPECIES 7 ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00940000175837 ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00690000103139 ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00950000182967 ENSGT00390000002197 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 Eupecaria_C ANCESTRAL SPECIES 6 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00940000175837 ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Eupercaria_incertae_sedis ANCESTRAL SPECIES 4 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00940000175837 ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000154745.b ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C European seabass MODERN SPECIES 19 wfdc1 (ENSDLAG00005028063) ENSDLAG00005034556 kcng4a (ENSDLAG00005015523) ENSDLAG00005015519 ENSDLAG00005015510 ENSDLAG00005032269 ENSDLAG00005015246 mlycd (ENSDLAG00005026682) ENSDLAG00005014861 ccnd2a (ENSDLAG00005030297) tigara (ENSDLAG00005014796) ENSDLAG00005014780 FGF6 (ENSDLAG00005026710) zgc:77158 (ENSDLAG00005030367) zgc:154077 (ENSDLAG00005014724) e2f4 (ENSDLAG00005034953) #22 ENSDLAG00005012191 #23 ENSDLAG00005012127 #24 ENSDLAG00005011778 ENSDLAG00005030412 zpd (ENSDLAG00005011690) ENSDLAG00005011639 ENSDLAG00005032407 ENSDLAG00005011610 ENSDLAG00005028257 ENSDLAG00005029005 ENSDLAG00005010836 ENSDLAG00005011276 ENSDLAG00005010819 aars1 (ENSDLAG00005010724) st3gal2 (ENSDLAG00005029110) Large yellow croaker MODERN SPECIES 492 DYRK4 (ENSLCRG00005016539) wfdc1 (ENSLCRG00005016524) ENSLCRG00005016521 kcng4a (ENSLCRG00005016517) ENSLCRG00005016513 hsbp1a (ENSLCRG00005016512) ENSLCRG00005016461 mlycd (ENSLCRG00005016423) CDH13 (ENSLCRG00005016260) ccnd2a (ENSLCRG00005016231) tigara (ENSLCRG00005016217) ENSLCRG00005016215 FGF6 (ENSLCRG00005016207) zgc:77158 (ENSLCRG00005016203) zgc:154077 (ENSLCRG00005016180) e2f4 (ENSLCRG00005016173) #22 ELMO3 (ENSLCRG00005013526) #23 ENSLCRG00005013239 #24 ENSLCRG00005013186 MMP15 (ENSLCRG00005013163) zpd (ENSLCRG00005013159) ENSLCRG00005013151 TMED6 (ENSLCRG00005013149) ZDHHC7 (ENSLCRG00005013142) ANKRD27 (ENSLCRG00005013092) ENSLCRG00005013057 faap24 (ENSLCRG00005013038) SLC7A10 (ENSLCRG00005012998) DUS2 (ENSLCRG00005012898) ENSLCRG00005012871 pdcd2l (ENSLCRG00005012867) Gilthead seabream MODERN SPECIES 22 wfdc1 (ENSSAUG00010008149) ENSSAUG00010008146 ENSSAUG00010008145 kcng4a (ENSSAUG00010008139) ENSSAUG00010008117 hsbp1a (ENSSAUG00010008115) ENSSAUG00010007723 mlycd (ENSSAUG00010007704) CDH13 (ENSSAUG00010007689) ccnd2a (ENSSAUG00010007686) ENSSAUG00010007685 tigara (ENSSAUG00010007682) FGF6 (ENSSAUG00010007681) zgc:77158 (ENSSAUG00010007680) zgc:154077 (ENSSAUG00010007664) e2f4 (ENSSAUG00010007663) #22 ELMO3 (ENSSAUG00010005248) #23 ENSSAUG00010005229 #24 bcl2l13 (ENSSAUG00010005228) wee2 (ENSSAUG00010005031) dennd11 (ENSSAUG00010005004) agk (ENSSAUG00010005001) nup205 (ENSSAUG00010004458) fgd4a (ENSSAUG00010004317) BICD1 (ENSSAUG00010004288) ENSSAUG00010004278 slc23a4 (ENSSAUG00010004221) ENSSAUG00010004186 TMTC2 (ENSSAUG00010004115) CRACR2A (ENSSAUG00010026488) ENSSAUG00010026443 Perciformes ANCESTRAL SPECIES 7 ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00940000175837 ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00690000103139 ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00950000182967 ENSGT00390000002197 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 Cottioidei ANCESTRAL SPECIES 6 ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00940000179145 ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00690000103139 ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 Stickleback MODERN SPECIES 14 ndufa9a (ENSGACG00000013731) DYRK4 (ENSGACG00000013763) wfdc1 (ENSGACG00000013768) ENSGACG00000013772 kcng4a (ENSGACG00000013775) ENSGACG00000013779 hsbp1a (ENSGACG00000013784) ENSGACG00000013788 mlycd (ENSGACG00000013794) CDH13 (ENSGACG00000013796) ccnd2a (ENSGACG00000013801) tigara (ENSGACG00000013805) FGF6 (ENSGACG00000013812) zgc:77158 (ENSGACG00000013816) zgc:154077 (ENSGACG00000013820) e2f4 (ENSGACG00000013827) #22 ELMO3 (ENSGACG00000013830) #23 ENSGACG00000013845 #24 ENSGACG00000013850 ENSGACG00000013854 MMP15 (ENSGACG00000013856) zpd (ENSGACG00000013858) nup93 (ENSGACG00000013862) steep1 (ENSGACG00000013883) sc5d (ENSGACG00000013886) anapc13 (ENSGACG00000013894) rspry1 (ENSGACG00000013896) arl2bp (ENSGACG00000013899) pllp (ENSGACG00000013906) ENSGACG00000013913 ENSGACG00000013915 Lumpfish MODERN SPECIES 21 ndufa9a (ENSCLMG00005021247) DYRK4 (ENSCLMG00005021404) wfdc1 (ENSCLMG00005021405) kcng4a (ENSCLMG00005021406) ENSCLMG00005021407 hsbp1a (ENSCLMG00005021408) ENSCLMG00005021410 mlycd (ENSCLMG00005021411) CDH13 (ENSCLMG00005021412) ccnd2a (ENSCLMG00005021414) ENSCLMG00005021418 ENSCLMG00005021421 FGF6 (ENSCLMG00005021424) zgc:77158 (ENSCLMG00005021426) zgc:154077 (ENSCLMG00005021427) e2f4 (ENSCLMG00005021429) #22 ELMO3 (ENSCLMG00005021444) #23 ENSCLMG00005021820 #24 MMP15 (ENSCLMG00005021824) zpd (ENSCLMG00005021831) nup93 (ENSCLMG00005021835) mt2 (ENSCLMG00005021844) SC5D (ENSCLMG00005021845) anapc13 (ENSCLMG00005021846) ENSCLMG00005021847 rspry1 (ENSCLMG00005021850) arl2bp (ENSCLMG00005021861) pllp (ENSCLMG00005021865) ENSCLMG00005021866 ENSCLMG00005021867 ENSCLMG00005021868 Perciformes_a ANCESTRAL SPECIES 7 ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00940000175837 ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00950000182967 ENSGT00390000002197 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Channel bull blenny MODERN SPECIES 20 kcng4a (ENSCGOG00000011468) ENSCGOG00000011466 ENSCGOG00000011464 hsbp1a (ENSCGOG00000011456) ENSCGOG00000010982 mlycd (ENSCGOG00000010975) ENSCGOG00000010973 CDH13 (ENSCGOG00000010955) ENSCGOG00000010951 ccnd2a (ENSCGOG00000010936) tigara (ENSCGOG00000010932) ENSCGOG00000010930 FGF6 (ENSCGOG00000010920) zgc:77158 (ENSCGOG00000010914) zgc:154077 (ENSCGOG00000010867) e2f4 (ENSCGOG00000010858) #22 ELMO3 (ENSCGOG00000008680) #23 ENSCGOG00000008631 #24 ENSCGOG00000008622 MMP15 (ENSCGOG00000008614) zpd (ENSCGOG00000008606) nup93 (ENSCGOG00000007992) mt2 (ENSCGOG00000007977) steep1 (ENSCGOG00000007974) mt2 (ENSCGOG00000007972) sc5d (ENSCGOG00000007970) anapc13 (ENSCGOG00000007968) ENSCGOG00000007965 rspry1 (ENSCGOG00000007703) arl2bp (ENSCGOG00000007688) pllp (ENSCGOG00000007683) Pike perch MODERN SPECIES 188 ccnd2a (ENSSLUG00000011388) tigara (ENSSLUG00000011381) ENSSLUG00000011375 FGF6 (ENSSLUG00000011372) zgc:77158 (ENSSLUG00000011369) zgc:154077 (ENSSLUG00000011341) e2f4 (ENSSLUG00000011331) #22 ELMO3 (ENSSLUG00000009451) #23 ENSSLUG00000009332 #24 ENSSLUG00000009326 MMP15 (ENSSLUG00000009316) zpd (ENSSLUG00000009304) nup93 (ENSSLUG00000009210) steep1 (ENSSLUG00000009179) mt2 (ENSSLUG00000009174) sc5d (ENSSLUG00000009169) anapc13 (ENSSLUG00000009162) ENSSLUG00000009158 rspry1 (ENSSLUG00000009148) arl2bp (ENSSLUG00000009135) pllp (ENSSLUG00000009124) ENSSLUG00000009112 Percomorphaceae_D ANCESTRAL SPECIES 5 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Carangaria ANCESTRAL SPECIES 6 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Pleuronectoidei ANCESTRAL SPECIES ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Turbot MODERN SPECIES 1 ENSSMAG00000011755 wfdc1 (ENSSMAG00000036660) ENSSMAG00000011878 kcng4a (ENSSMAG00000011899) ENSSMAG00000031063 ENSSMAG00000011917 ENSSMAG00000011925 mlycd (ENSSMAG00000011951) ENSSMAG00000011971 ccnd2a (ENSSMAG00000011997) tigara (ENSSMAG00000012026) ENSSMAG00000035972 FGF6 (ENSSMAG00000012043) zgc:77158 (ENSSMAG00000012054) zgc:154077 (ENSSMAG00000012067) e2f4 (ENSSMAG00000012104) #22 ENSSMAG00000012123 #23 ENSSMAG00000012172 #24 ENSSMAG00000012228 zpd (ENSSMAG00000012303) ENSSMAG00000012311 ENSSMAG00000012408 ENSSMAG00000031830 ENSSMAG00000012431 ENSSMAG00000027183 ENSSMAG00000012461 RSPRY1 (ENSSMAG00000012467) ENSSMAG00000012541 ENSSMAG00000012570 ENSSMAG00000013614 PLLP (ENSSMAG00000032977) Tongue sole MODERN SPECIES 16 tes (ENSCSEG00000021371) cav2 (ENSCSEG00000021370) cav1 (ENSCSEG00000021369) met (ENSCSEG00000021367) ENSCSEG00000021365 st7 (ENSCSEG00000021354) wnt2 (ENSCSEG00000021352) ASZ1 (ENSCSEG00000021350) cftr (ENSCSEG00000021346) eif4g2b (ENSCSEG00000021334) ENSCSEG00000021329 zgc:103499 (ENSCSEG00000021327) FGF6 (ENSCSEG00000021326) zgc:77158 (ENSCSEG00000021325) zgc:154077 (ENSCSEG00000021322) e2f4 (ENSCSEG00000021321) #22 ELMO3 (ENSCSEG00000021316) #23 ENSCSEG00000021268 #24 ENSCSEG00000021267 MMP15 (ENSCSEG00000021264) zpd (ENSCSEG00000021263) nup93 (ENSCSEG00000021262) steep1 (ENSCSEG00000021261) mt2 (ENSCSEG00000021260) anapc13 (ENSCSEG00000021259) ENSCSEG00000021258 rspry1 (ENSCSEG00000021257) arl2bp (ENSCSEG00000021256) PLLP (ENSCSEG00000021255) ENSCSEG00000021254 ENSCSEG00000021253 Carangaria_A ANCESTRAL SPECIES ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Barramundi perch MODERN SPECIES 112 ENSLCAG00010010361 hsbp1a (ENSLCAG00010010364) ENSLCAG00010010396 mlycd (ENSLCAG00010010503) ENSLCAG00010010506 ccnd2a (ENSLCAG00010010511) tigara (ENSLCAG00010010516) ENSLCAG00010010520 FGF6 (ENSLCAG00010010527) zgc:77158 (ENSLCAG00010010534) zgc:154077 (ENSLCAG00010010542) e2f4 (ENSLCAG00010010556) #22 ELMO3 (ENSLCAG00010010566) #23 ENSLCAG00010010580 #24 ENSLCAG00010010590 MMP15 (ENSLCAG00010010597) zpd (ENSLCAG00010010600) nup93 (ENSLCAG00010010611) steep1 (ENSLCAG00010010631) mt2 (ENSLCAG00010010647) sc5d (ENSLCAG00010010679) anapc13 (ENSLCAG00010010684) ENSLCAG00010010688 rspry1 (ENSLCAG00010010695) arl2bp (ENSLCAG00010010716) PLLP (ENSLCAG00010010719) ENSLCAG00010010731 Seriola ANCESTRAL SPECIES 54 ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000180965 ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Greater amberjack MODERN SPECIES 61 wfdc1 (ENSSDUG00000022081) ENSSDUG00000022072 kcng4a (ENSSDUG00000022066) ENSSDUG00000022060 hsbp1a (ENSSDUG00000022056) ENSSDUG00000022036 mlycd (ENSSDUG00000022025) CDH13 (ENSSDUG00000022006) ENSSDUG00000022000 ccnd2a (ENSSDUG00000021998) tigara (ENSSDUG00000021993) ENSSDUG00000021987 FGF6 (ENSSDUG00000021964) zgc:77158 (ENSSDUG00000021956) zgc:154077 (ENSSDUG00000021939) e2f4 (ENSSDUG00000021925) #22 ELMO3 (ENSSDUG00000021897) #23 ENSSDUG00000021872 #24 ENSSDUG00000021820 MMP15 (ENSSDUG00000021805) zpd (ENSSDUG00000021797) nup93 (ENSSDUG00000021765) steep1 (ENSSDUG00000021752) mt2 (ENSSDUG00000021749) sc5d (ENSSDUG00000021739) anapc13 (ENSSDUG00000021738) ENSSDUG00000021732 rspry1 (ENSSDUG00000021708) arl2bp (ENSSDUG00000021675) pllp (ENSSDUG00000021669) ENSSDUG00000021655 Yellowtail amberjack MODERN SPECIES 3034 ENSSLDG00000013235 kcng4a (ENSSLDG00000013265) ENSSLDG00000013275 hsbp1a (ENSSLDG00000013294) ENSSLDG00000013311 mlycd (ENSSLDG00000013329) CDH13 (ENSSLDG00000013352) ENSSLDG00000013389 ccnd2a (ENSSLDG00000013398) ccnd2a (ENSSLDG00000013409) tigara (ENSSLDG00000013430) ENSSLDG00000013441 FGF6 (ENSSLDG00000013446) zgc:77158 (ENSSLDG00000013458) zgc:154077 (ENSSLDG00000013471) e2f4 (ENSSLDG00000013484) #22 ELMO3 (ENSSLDG00000013553) #23 ENSSLDG00000013612 #24 ENSSLDG00000013758 MMP15 (ENSSLDG00000014077) zpd (ENSSLDG00000014109) nup93 (ENSSLDG00000014133) steep1 (ENSSLDG00000014167) mt2 (ENSSLDG00000014180) sc5d (ENSSLDG00000014191) anapc13 (ENSSLDG00000014210) ENSSLDG00000014220 rspry1 (ENSSLDG00000014237) arl2bp (ENSSLDG00000014286) pllp (ENSSLDG00000014312) ENSSLDG00000014343 Anabantaria ANCESTRAL SPECIES 5 ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Anabantoidei ANCESTRAL SPECIES 5 ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT00940000168208 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 17 ldha (ENSBSLG00000003863) tsg101a (ENSBSLG00000003768) wfdc1 (ENSBSLG00000003680) ENSBSLG00000003649 kcng4a (ENSBSLG00000003611) ENSBSLG00000003573 hsbp1a (ENSBSLG00000002996) ENSBSLG00000002465 mlycd (ENSBSLG00000002221) CDH13 (ENSBSLG00000002193) ccnd2a (ENSBSLG00000002108) tigara (ENSBSLG00000002107) ENSBSLG00000002106 FGF6 (ENSBSLG00000002105) zgc:154077 (ENSBSLG00000002104) e2f4 (ENSBSLG00000002103) #22 ENSBSLG00000002102 #24 ENSBSLG00000002101 MMP15 (ENSBSLG00000002099) zpd (ENSBSLG00000002095) nup93 (ENSBSLG00000002093) sc5d (ENSBSLG00000002088) zgc:77158 (ENSBSLG00000002087) zgc:154077 (ENSBSLG00000002086) e2f4 (ENSBSLG00000002083) #22 ELMO3 (ENSBSLG00000002075) #23 ENSBSLG00000002070 #24 ENSBSLG00000002049 MMP15 (ENSBSLG00000001982) zpd (ENSBSLG00000001959) nup93 (ENSBSLG00000001632) Siamese fighting fish MODERN SPECIES 17 CDH13 (ENSBSLG00000002193) ccnd2a (ENSBSLG00000002108) tigara (ENSBSLG00000002107) ENSBSLG00000002106 FGF6 (ENSBSLG00000002105) zgc:154077 (ENSBSLG00000002104) e2f4 (ENSBSLG00000002103) #22 ENSBSLG00000002102 #24 ENSBSLG00000002101 MMP15 (ENSBSLG00000002099) zpd (ENSBSLG00000002095) nup93 (ENSBSLG00000002093) sc5d (ENSBSLG00000002088) zgc:77158 (ENSBSLG00000002087) zgc:154077 (ENSBSLG00000002086) e2f4 (ENSBSLG00000002083) #22 ELMO3 (ENSBSLG00000002075) #23 ENSBSLG00000002070 #24 ENSBSLG00000002049 MMP15 (ENSBSLG00000001982) zpd (ENSBSLG00000001959) nup93 (ENSBSLG00000001632) ENSBSLG00000001573 sc5d (ENSBSLG00000001567) anapc13 (ENSBSLG00000001557) rspry1 (ENSBSLG00000001518) arl2bp (ENSBSLG00000001507) PLLP (ENSBSLG00000001502) ENSBSLG00000001447 ENSBSLG00000001405 ENSBSLG00000001395 Climbing perch MODERN SPECIES 19 DYRK4 (ENSATEG00000016368) wfdc1 (ENSATEG00000016347) ENSATEG00000027818 kcng4a (ENSATEG00000028839) ENSATEG00000016257 ENSATEG00000028822 ENSATEG00000016230 mlycd (ENSATEG00000016221) ENSATEG00000016196 ccnd2a (ENSATEG00000016152) tigara (ENSATEG00000016135) ENSATEG00000016120 FGF6 (ENSATEG00000029536) zgc:77158 (ENSATEG00000015906) zgc:154077 (ENSATEG00000015859) e2f4 (ENSATEG00000015810) #22 ENSATEG00000015694 #23 ENSATEG00000015601 #24 ENSATEG00000014625 zpd (ENSATEG00000014567) ENSATEG00000014506 ENSATEG00000014489 ENSATEG00000029750 ENSATEG00000014289 ENSATEG00000014285 ENSATEG00000014269 RSPRY1 (ENSATEG00000014238) ENSATEG00000027222 PLLP (ENSATEG00000028516) ENSATEG00000014166 ENSATEG00000013918 Zig-zag eel MODERN SPECIES 20 ndufa9a (ENSMAMG00000017651) DYRK4 (ENSMAMG00000017632) wfdc1 (ENSMAMG00000017621) ENSMAMG00000017596 kcng4a (ENSMAMG00000017584) ENSMAMG00000025730 ENSMAMG00000017555 ENSMAMG00000017525 mlycd (ENSMAMG00000027391) ENSMAMG00000017501 ccnd2a (ENSMAMG00000025527) tigara (ENSMAMG00000017448) FGF6 (ENSMAMG00000027977) zgc:77158 (ENSMAMG00000017428) zgc:154077 (ENSMAMG00000017400) e2f4 (ENSMAMG00000017389) #22 ENSMAMG00000017343 #23 ENSMAMG00000017318 #24 ENSMAMG00000017300 ENSMAMG00000024506 ENSMAMG00000017273 ENSMAMG00000017245 zpd (ENSMAMG00000017221) ENSMAMG00000017167 ENSMAMG00000017155 ENSMAMG00000017143 ENSMAMG00000027790 ENSMAMG00000028149 ENSMAMG00000017111 RSPRY1 (ENSMAMG00000017061) ENSMAMG00000017050 Ovalentaria ANCESTRAL SPECIES 7 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Ovalentaria_B ANCESTRAL SPECIES 3 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Cichlidae ANCESTRAL SPECIES 5 ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Nile tilapia MODERN SPECIES 19 ENSONIG00000010299 kcng4a (ENSONIG00000010298) ENSONIG00000028324 hsbp1a (ENSONIG00000036500) ENSONIG00000010288 mlycd (ENSONIG00000010287) CDH13 (ENSONIG00000010285) ENSONIG00000032947 ccnd2a (ENSONIG00000032436) tigara (ENSONIG00000042173) ENSONIG00000039946 FGF6 (ENSONIG00000041125) slc45a3 (ENSONIG00000010277) ENSONIG00000028180 zgc:154077 (ENSONIG00000010272) e2f4 (ENSONIG00000010271) #22 ELMO3 (ENSONIG00000010266) #23 ENSONIG00000010264 #24 ENSONIG00000033564 MMP15 (ENSONIG00000010259) zpd (ENSONIG00000010255) nup93 (ENSONIG00000010250) siah1 (ENSONIG00000035905) n4bp1 (ENSONIG00000007367) ENSONIG00000028086 ENSONIG00000038902 ENSONIG00000029901 cbln1 (ENSONIG00000040280) si:ch211-212o1.2 (ENSONIG00000007362) znf423 (ENSONIG00000007360) si:ch211-216l23.2 (ENSONIG00000007359) Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Haplochromini ANCESTRAL SPECIES ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Burton s mouthbrooder MODERN SPECIES 461 ENSHBUG00000013175 ENSHBUG00000013131 ENSHBUG00000012954 CDH13 (ENSHBUG00000012945) ccnd2a (ENSHBUG00000012904) tigara (ENSHBUG00000012885) ENSHBUG00000012869 FGF6 (ENSHBUG00000012861) zgc:77158 (ENSHBUG00000012856) ENSHBUG00000012846 e2f4 (ENSHBUG00000012827) #22 ELMO3 (ENSHBUG00000012815) #23 ENSHBUG00000012725 #24 ENSHBUG00000012718 MMP15 (ENSHBUG00000012619) zpd (ENSHBUG00000012593) nup93 (ENSHBUG00000000357) steep1 (ENSHBUG00000012485) ENSHBUG00000012479 sc5d (ENSHBUG00000012465) anapc13 (ENSHBUG00000012445) ENSHBUG00000012437 rspry1 (ENSHBUG00000012421) arl2bp (ENSHBUG00000012368) PLLP (ENSHBUG00000012335) ENSHBUG00000012318 Haplochromini_A ANCESTRAL SPECIES 1 ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C P. nyererei MODERN SPECIES 355 ndufa9a (ENSPNYG00000020067) DYRK4 (ENSPNYG00000020052) wfdc1 (ENSPNYG00000020030) kcng4a (ENSPNYG00000020010) ENSPNYG00000019985 hsbp1a (ENSPNYG00000019977) ENSPNYG00000019943 mlycd (ENSPNYG00000019920) CDH13 (ENSPNYG00000019835) ccnd2a (ENSPNYG00000019809) tigara (ENSPNYG00000019799) ENSPNYG00000019791 FGF6 (ENSPNYG00000019785) zgc:77158 (ENSPNYG00000019754) zgc:154077 (ENSPNYG00000019717) e2f4 (ENSPNYG00000019631) #22 ELMO3 (ENSPNYG00000019559) #23 ENSPNYG00000019522 #24 ENSPNYG00000019444 MMP15 (ENSPNYG00000019320) nup93 (ENSPNYG00000019233) steep1 (ENSPNYG00000019199) mt2 (ENSPNYG00000019191) sc5d (ENSPNYG00000019167) anapc13 (ENSPNYG00000019183) ENSPNYG00000019147 rspry1 (ENSPNYG00000019088) arl2bp (ENSPNYG00000019058) pllp (ENSPNYG00000019053) ENSPNYG00000019014 Haplochromini_B ANCESTRAL SPECIES 40 ENSGT00390000006865 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT01090000260267.a ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT01050000244866.C Zebra mbuna MODERN SPECIES 1110 ENSMZEG00005016573 kcng4a (ENSMZEG00005016567) ENSMZEG00005016557 hsbp1a (ENSMZEG00005016523) ENSMZEG00005016506 mlycd (ENSMZEG00005016497) ENSMZEG00005016489 CDH13 (ENSMZEG00005016472) ENSMZEG00005016447 ccnd2a (ENSMZEG00005016431) tigara (ENSMZEG00005016408) ENSMZEG00005016397 FGF6 (ENSMZEG00005016390) zgc:77158 (ENSMZEG00005016381) zgc:154077 (ENSMZEG00005016367) e2f4 (ENSMZEG00005016357) #22 ENSMZEG00005016351 #24 ELMO3 (ENSMZEG00005016325) #23 cbfb (ENSMZEG00005016281) #13 phaf1 (ENSMZEG00005016267) ##14 ENSMZEG00005016263 B3GNT9 (ENSMZEG00005016259) #15 bbs2 (ENSMZEG00005016240) setd6 (ENSMZEG00005016231) cnot1 (ENSMZEG00005016210) si:ch211-216l23.2 (ENSMZEG00005016197) znf423 (ENSMZEG00005016171) si:ch211-212o1.2 (ENSMZEG00005016154) cbln1 (ENSMZEG00005016145) n4bp1 (ENSMZEG00005016117) siah1 (ENSMZEG00005016100) Eastern happy MODERN SPECIES 19 ENSACLG00000009635 kcng4a (ENSACLG00000010178) ENSACLG00000010187 hsbp1a (ENSACLG00000010202) ENSACLG00000010209 mlycd (ENSACLG00000010226) ENSACLG00000010231 CDH13 (ENSACLG00000010761) ENSACLG00000010900 ccnd2a (ENSACLG00000010954) tigara (ENSACLG00000010968) ENSACLG00000010990 FGF6 (ENSACLG00000011000) zgc:77158 (ENSACLG00000011006) zgc:154077 (ENSACLG00000011359) e2f4 (ENSACLG00000011387) #22 ELMO3 (ENSACLG00000011414) #23 ENSACLG00000011450 #24 ENSACLG00000011480 MMP15 (ENSACLG00000011508) zpd (ENSACLG00000011540) nup93 (ENSACLG00000011556) steep1 (ENSACLG00000011616) ENSACLG00000011623 sc5d (ENSACLG00000011632) anapc13 (ENSACLG00000011649) ENSACLG00000011655 rspry1 (ENSACLG00000011660) arl2bp (ENSACLG00000011713) pllp (ENSACLG00000011756) ENSACLG00000011775 Lyretail cichlid MODERN SPECIES 330 ENSNBRG00000017536 wfdc1 (ENSNBRG00000017553) ENSNBRG00000017568 kcng4a (ENSNBRG00000017576) ENSNBRG00000017593 hsbp1a (ENSNBRG00000017610) ENSNBRG00000017640 mlycd (ENSNBRG00000017695) CDH13 (ENSNBRG00000017715) ccnd2a (ENSNBRG00000017753) tigara (ENSNBRG00000017788) ENSNBRG00000017806 FGF6 (ENSNBRG00000017828) zgc:77158 (ENSNBRG00000017846) zgc:154077 (ENSNBRG00000017889) e2f4 (ENSNBRG00000017930) #22 ELMO3 (ENSNBRG00000017988) #23 ENSNBRG00000018043 #24 ENSNBRG00000018085 MMP15 (ENSNBRG00000018204) zpd (ENSNBRG00000018389) nup93 (ENSNBRG00000018433) ENSNBRG00000018487 sc5d (ENSNBRG00000018495) anapc13 (ENSNBRG00000018504) ENSNBRG00000018510 rspry1 (ENSNBRG00000018519) arl2bp (ENSNBRG00000018548) pllp (ENSNBRG00000018599) ENSNBRG00000018610 ENSNBRG00000018652 Midas cichlid MODERN SPECIES 973 DYRK4 (ENSACIG00000004398) wfdc1 (ENSACIG00000004439) ENSACIG00000004453 kcng4a (ENSACIG00000004465) ENSACIG00000004488 hsbp1a (ENSACIG00000004506) ENSACIG00000004520 mlycd (ENSACIG00000004556) CDH13 (ENSACIG00000004573) ccnd2a (ENSACIG00000004647) tigara (ENSACIG00000004659) ENSACIG00000004732 FGF6 (ENSACIG00000004741) zgc:77158 (ENSACIG00000004751) zgc:154077 (ENSACIG00000004764) e2f4 (ENSACIG00000004797) #22 ELMO3 (ENSACIG00000004869) #23 ENSACIG00000004958 #24 ENSACIG00000004991 MMP15 (ENSACIG00000005020) zpd (ENSACIG00000005071) nup93 (ENSACIG00000005110) steep1 (ENSACIG00000005161) mt2 (ENSACIG00000005171) sc5d (ENSACIG00000005176) anapc13 (ENSACIG00000005196) ENSACIG00000005202 rspry1 (ENSACIG00000005210) arl2bp (ENSACIG00000005241) pllp (ENSACIG00000005258) ENSACIG00000005271 Pomacentridae ANCESTRAL SPECIES 1 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00550000075101.r ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT00940000179140 Pomacentridae_A ANCESTRAL SPECIES 27 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455.b #23 ENSGT00940000159455.a #23 ENSGT00940000160637 #24 ENSGT00940000162283.a Amphiprion ANCESTRAL SPECIES 21 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00940000181532 ENSGT00950000182914.b ENSGT00390000010229 ENSGT01030000239249 ENSGT00940000156252.pb.a #22 ENSGT00940000159455.b #23 ENSGT00940000159455.a #23 ENSGT00940000160637 #24 ENSGT00940000162283.a Orange clownfish MODERN SPECIES 18 ENSAPEG00000001101 hsbp1a (ENSAPEG00000001078) ENSAPEG00000001022 mlycd (ENSAPEG00000000977) CDH13 (ENSAPEG00000000931) ENSAPEG00000000912 ccnd2a (ENSAPEG00000000885) ENSAPEG00000000861 ENSAPEG00000000834 tigara (ENSAPEG00000000727) FGF6 (ENSAPEG00000000615) ENSAPEG00000000598 zgc:77158 (ENSAPEG00000000594) zgc:154077 (ENSAPEG00000000529) ENSAPEG00000000494 e2f4 (ENSAPEG00000000485) #22 ENSAPEG00000000437 #24 ELMO3 (ENSAPEG00000000294) #23 ENSAPEG00000024185 Clown anemonefish MODERN SPECIES 206 ENSAOCG00000011970 tigara (ENSAOCG00000012108) FGF6 (ENSAOCG00000001843) ENSAOCG00000012147 zgc:77158 (ENSAOCG00000012175) zgc:154077 (ENSAOCG00000012213) ENSAOCG00000012242 e2f4 (ENSAOCG00000012260) #22 ELMO3 (ENSAOCG00000012321) #23 Spiny chromis MODERN SPECIES 72 ENSAPOG00000023954 hsbp1a (ENSAPOG00000023969) ENSAPOG00000024036 mlycd (ENSAPOG00000024049) CDH13 (ENSAPOG00000024126) ENSAPOG00000024135 ccnd2a (ENSAPOG00000024144) tigara (ENSAPOG00000024154) ENSAPOG00000024158 FGF6 (ENSAPOG00000024165) zgc:77158 (ENSAPOG00000024195) zgc:154077 (ENSAPOG00000024244) e2f4 (ENSAPOG00000024263) #22 ELMO3 (ENSAPOG00000024307) #23 Bicolor damselfish MODERN SPECIES 1451 FGF6 (ENSSPAG00000005195) zgc:77158 (ENSSPAG00000005209) zgc:154077 (ENSSPAG00000005238) e2f4 (ENSSPAG00000005274) #22 ELMO3 (ENSSPAG00000005305) #23 ENSSPAG00000005378 #24 ENSSPAG00000005412 MMP15 (ENSSPAG00000005651) ENSSPAG00000005666 anapc13 (ENSSPAG00000005672) sc5d (ENSSPAG00000005682) mt2 (ENSSPAG00000005715) steep1 (ENSSPAG00000005729) nup93 (ENSSPAG00000005740) Atherinomorphae ANCESTRAL SPECIES 5 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT00940000157517 ENSGT00940000158087 Oryzias ANCESTRAL SPECIES 27 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00390000008673 ENSGT00940000157517 ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00940000158087 Oryzias_b ANCESTRAL SPECIES ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00390000008673 ENSGT00940000157517 ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00940000158087 Javanese ricefish MODERN SPECIES 20 ccnd2a (ENSOJAG00000014590) tigara (ENSOJAG00000014583) FGF6 (ENSOJAG00000014562) zgc:77158 (ENSOJAG00000014555) zgc:154077 (ENSOJAG00000014191) e2f4 (ENSOJAG00000014167) #22 ELMO3 (ENSOJAG00000013491) #23 ENSOJAG00000013467 #24 ENSOJAG00000012987 MMP15 (ENSOJAG00000012954) zpd (ENSOJAG00000012945) nup93 (ENSOJAG00000012381) steep1 (ENSOJAG00000012361) MT (ENSOJAG00000012345) anapc13 (ENSOJAG00000012328) plcg2 (ENSOJAG00000012019) arl2bp (ENSOJAG00000011989) rspry1 (ENSOJAG00000011860) meak7 (ENSOJAG00000011849) ENSOJAG00000011833 klhl36 (ENSOJAG00000011822) Indian medaka MODERN SPECIES 15 tmem237b (ENSOMEG00000021418) cyp20a1 (ENSOMEG00000021385) abi2b (ENSOMEG00000021282) ENSOMEG00000021084 hsbp1a (ENSOMEG00000021058) hsbp1a (ENSOMEG00000021046) ENSOMEG00000021015 mlycd (ENSOMEG00000020903) CDH13 (ENSOMEG00000020855) ccnd2a (ENSOMEG00000020836) tigara (ENSOMEG00000020814) ENSOMEG00000020796 FGF6 (ENSOMEG00000020767) zgc:77158 (ENSOMEG00000020727) zgc:154077 (ENSOMEG00000020707) e2f4 (ENSOMEG00000020653) #22 ELMO3 (ENSOMEG00000020593) #23 ENSOMEG00000020523 #24 sostdc1a (ENSOMEG00000020482) ENSOMEG00000020454 ENSOMEG00000020375 zpd (ENSOMEG00000020325) nup93 (ENSOMEG00000020283) steep1 (ENSOMEG00000020244) mt2 (ENSOMEG00000020227) anapc13 (ENSOMEG00000020209) plcg2 (ENSOMEG00000020188) pllp (ENSOMEG00000020125) meak7 (ENSOMEG00000020111) arl2bp (ENSOMEG00000020067) rspry1 (ENSOMEG00000020054) Oryzias_a ANCESTRAL SPECIES 1 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00390000008673 ENSGT00940000157517 ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00940000158087 Japanese Medaka HdrR MODERN SPECIES 20 wfdc1 (ENSORLG00000029685) ENSORLG00000015822 kcng4a (ENSORLG00000015804) ENSORLG00000015795 hsbp1a (ENSORLG00000015789) ENSORLG00000015781 mlycd (ENSORLG00000015765) CDH13 (ENSORLG00000015758) ENSORLG00000026574 ccnd2a (ENSORLG00000025430) tigara (ENSORLG00000015738) ENSORLG00000015730 FGF6 (ENSORLG00000015726) zgc:77158 (ENSORLG00000015720) zgc:154077 (ENSORLG00000015713) e2f4 (ENSORLG00000015705) #22 ELMO3 (ENSORLG00000015675) #23 ENSORLG00000015638 #24 ENSORLG00000028564 ENSORLG00000015628 zpd (ENSORLG00000015608) nup93 (ENSORLG00000015598) steep1 (ENSORLG00000015587) mt2 (ENSORLG00000015580) anapc13 (ENSORLG00000015577) plcg2 (ENSORLG00000015570) pllp (ENSORLG00000026210) arl2bp (ENSORLG00000015513) rspry1 (ENSORLG00000015495) ENSORLG00000015479 meak7 (ENSORLG00000015474) Chinese medaka MODERN SPECIES 530 CDH13 (ENSOSIG00000008584) ENSOSIG00000008888 ccnd2a (ENSOSIG00000008893) e2f4 (ENSOSIG00000008905) #22 ENSOSIG00000008907 zgc:77158 (ENSOSIG00000008909) zgc:154077 (ENSOSIG00000008911) ELMO3 (ENSOSIG00000008925) #23 ENSOSIG00000009931 #24 ENSOSIG00000009932 MMP15 (ENSOSIG00000009933) zpd (ENSOSIG00000009934) nup93 (ENSOSIG00000009940) plcg2 (ENSOSIG00000010513) anapc13 (ENSOSIG00000011184) mt2 (ENSOSIG00000011185) steep1 (ENSOSIG00000011186) ENSOSIG00000011187 Cyprinodontiformes ANCESTRAL SPECIES 6 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT00940000157517 ENSGT00940000158087 Aplocheiloidei ANCESTRAL SPECIES 1 ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00940000179145 ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT00940000157517 ENSGT00940000158087 Mangrove rivulus MODERN SPECIES 45 ndufa9a (ENSKMAG00000021670) DYRK4 (ENSKMAG00000021653) wfdc1 (ENSKMAG00000021646) kcng4a (ENSKMAG00000021642) ENSKMAG00000021630 hsbp1a (ENSKMAG00000021618) ENSKMAG00000021594 mlycd (ENSKMAG00000021586) ENSKMAG00000021579 ccnd2a (ENSKMAG00000021573) ENSKMAG00000021567 ENSKMAG00000021564 FGF6 (ENSKMAG00000021558) zgc:77158 (ENSKMAG00000021551) zgc:154077 (ENSKMAG00000021526) e2f4 (ENSKMAG00000021514) #22 ELMO3 (ENSKMAG00000021485) #23 ENSKMAG00000021458 #24 ENSKMAG00000021441 MMP15 (ENSKMAG00000021436) zpd (ENSKMAG00000021421) nup93 (ENSKMAG00000021385) steep1 (ENSKMAG00000021367) mt2 (ENSKMAG00000021361) anapc13 (ENSKMAG00000021355) ENSKMAG00000021345 rspry1 (ENSKMAG00000021328) arl2bp (ENSKMAG00000021314) pllp (ENSKMAG00000021306) plcg2 (ENSKMAG00000021218) meak7 (ENSKMAG00000021185) Turquoise killifish MODERN SPECIES 1622 WFDC1 (ENSNFUG00015024049) ENSNFUG00015024047 kcng4a (ENSNFUG00015024041) Nfu_g_1_008163 (ENSNFUG00015024035) ENSNFUG00015024033 ENSNFUG00015023898 MLYCD (ENSNFUG00015023868) ENSNFUG00015023864 CDH13 (ENSNFUG00015023850) BX927253.1 (ENSNFUG00015023843) ENSNFUG00015023840 ccnd2a (ENSNFUG00015023836) tigara (ENSNFUG00015023834) FGF6 (ENSNFUG00015023831) zgc:77158 (ENSNFUG00015023816) e2f4 (ENSNFUG00015023804) #22 ELMO3 (ENSNFUG00015023697) #23 CU855816.1 (ENSNFUG00015023651) #24 ENSNFUG00015023591 MMP15 (ENSNFUG00015023571) zpd (ENSNFUG00015023563) NUP93 (ENSNFUG00015023542) C5HXORF56 (ENSNFUG00015023539) anapc13 (ENSNFUG00015023536) OLA.28136 (ENSNFUG00015023535) RSPRY1 (ENSNFUG00015023523) ARL2BP (ENSNFUG00015023518) pllp (ENSNFUG00015023513) plcg2 (ENSNFUG00015023423) KIAA1609 (ENSNFUG00015023418) COTL1 (ENSNFUG00015023412) Cyprinodontoidei ANCESTRAL SPECIES 34 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT00940000157517 ENSGT00940000158087 Poeciliinae ANCESTRAL SPECIES 3 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT00940000157517 ENSGT00940000158087 Poecilia ANCESTRAL SPECIES 74 ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT00940000157517 ENSGT00940000158087 NAME_6 ANCESTRAL SPECIES 360 ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00690000103139 Sailfin molly MODERN SPECIES 574 SLC18A1 (ENSPLAG00000021458) ENSPLAG00000021430 ZMIZ2 (ENSPLAG00000021415) OGDH (ENSPLAG00000021360) ENSPLAG00000021307 ccnd2a (ENSPLAG00000021294) tigara (ENSPLAG00000021260) ENSPLAG00000021076 FGF6 (ENSPLAG00000021063) zgc:77158 (ENSPLAG00000021049) zgc:154077 (ENSPLAG00000000541) e2f4 (ENSPLAG00000020990) #22 Amazon molly MODERN SPECIES 699 ccnd2a (ENSPFOG00000006265) tigara (ENSPFOG00000006399) FGF6 (ENSPFOG00000006476) zgc:77158 (ENSPFOG00000006509) zgc:154077 (ENSPFOG00000006589) e2f4 (ENSPFOG00000006707) #22 ELMO3 (ENSPFOG00000006816) #23 ENSPFOG00000007173 #24 ENSPFOG00000007269 ENSPFOG00000007418 Guppy MODERN SPECIES 458 ccnd2a (ENSPREG00000001311) ENSPREG00000001295 FGF6 (ENSPREG00000001273) zgc:77158 (ENSPREG00000001256) zgc:154077 (ENSPREG00000001201) e2f4 (ENSPREG00000001188) #22 ELMO3 (ENSPREG00000001162) #23 ENSPREG00000001132 #24 ENSPREG00000001109 MMP15 (ENSPREG00000001088) zpd (ENSPREG00000001074) nup93 (ENSPREG00000001062) steep1 (ENSPREG00000001043) mt2 (ENSPREG00000001009) anapc13 (ENSPREG00000000997) ENSPREG00000000984 rspry1 (ENSPREG00000000926) arl2bp (ENSPREG00000000872) pllp (ENSPREG00000000861) plcg2 (ENSPREG00000000819) meak7 (ENSPREG00000000709) Platyfish MODERN SPECIES 11 kcng4a (ENSXMAG00000005370) ENSXMAG00000021304 hsbp1a (ENSXMAG00000005364) ENSXMAG00000005335 mlycd (ENSXMAG00000009645) ENSXMAG00000020931 CDH13 (ENSXMAG00000022695) ENSXMAG00000026942 ccnd2a (ENSXMAG00000010870) tigara (ENSXMAG00000026866) ENSXMAG00000022876 FGF6 (ENSXMAG00000004288) zgc:77158 (ENSXMAG00000028226) ENSXMAG00000023377 zgc:154077 (ENSXMAG00000022964) e2f4 (ENSXMAG00000001974) #22 ELMO3 (ENSXMAG00000001980) #23 ENSXMAG00000013030 #24 ENSXMAG00000024751 MMP15 (ENSXMAG00000004942) zpd (ENSXMAG00000026630) nup93 (ENSXMAG00000013927) steep1 (ENSXMAG00000019476) ENSXMAG00000027273 mt2 (ENSXMAG00000020384) anapc13 (ENSXMAG00000028231) ENSXMAG00000022426 rspry1 (ENSXMAG00000013026) arl2bp (ENSXMAG00000013018) pllp (ENSXMAG00000021268) plcg2 (ENSXMAG00000011966) NAME_4 ANCESTRAL SPECIES 59 ENSGT00940000159401.d ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00940000155180.b.a ENSGT00940000163946.b ENSGT00530000069587 ENSGT00940000157821.h.b ENSGT00950000182914.b ENSGT00390000010229 ENSGT00940000156252.pb.a #22 ENSGT00940000159455 #23 ENSGT00940000160637 #24 ENSGT00940000162283.a ENSGT00940000156939.f ENSGT00940000167365 ENSGT00390000016353 ENSGT00390000002197 ENSGT00950000182967 ENSGT00390000008673 ENSGT01090000260267 ENSGT00940000157894 ENSGT00390000015052 ENSGT00940000156011 ENSGT00940000157517 ENSGT00940000158087 Mummichog MODERN SPECIES 302 ccnd2a (ENSFHEG00000009735) tigara (ENSFHEG00000009711) ENSFHEG00000009703 FGF6 (ENSFHEG00000009695) zgc:77158 (ENSFHEG00000009667) zgc:154077 (ENSFHEG00000000725) e2f4 (ENSFHEG00000009625) #22 arl2bp (ENSFHEG00000009558) ELMO3 (ENSFHEG00000009549) #23 ENSFHEG00000009533 #24 ENSFHEG00000009495 MMP15 (ENSFHEG00000009415) ENSFHEG00000009399 nup93 (ENSFHEG00000009372) steep1 (ENSFHEG00000009325) mt2 (ENSFHEG00000009315) anapc13 (ENSFHEG00000009306) ENSFHEG00000009298 rspry1 (ENSFHEG00000009290) ENSFHEG00000009255 pllp (ENSFHEG00000009234) plcg2 (ENSFHEG00000009213) Sheepshead minnow MODERN SPECIES 209 wfdc1 (ENSCVAG00000010366) ENSCVAG00000010403 kcng4a (ENSCVAG00000010425) ENSCVAG00000010434 hsbp1a (ENSCVAG00000010449) ENSCVAG00000010482 mlycd (ENSCVAG00000010494) CDH13 (ENSCVAG00000010535) ccnd2a (ENSCVAG00000010554) tigara (ENSCVAG00000010559) ENSCVAG00000010567 FGF6 (ENSCVAG00000010577) zgc:77158 (ENSCVAG00000010582) zgc:154077 (ENSCVAG00000010627) e2f4 (ENSCVAG00000010635) #22 ELMO3 (ENSCVAG00000010718) #23 ENSCVAG00000010733 #24 ENSCVAG00000010824 MMP15 (ENSCVAG00000010835) zpd (ENSCVAG00000010861) nup93 (ENSCVAG00000010979) steep1 (ENSCVAG00000010991) mt2 (ENSCVAG00000010997) anapc13 (ENSCVAG00000011009) ENSCVAG00000011016 rspry1 (ENSCVAG00000011071) arl2bp (ENSCVAG00000011092) pllp (ENSCVAG00000011098) plcg2 (ENSCVAG00000011167) meak7 (ENSCVAG00000011178) Pinecone sodierfish MODERN SPECIES 20 DYRK4 (ENSMMDG00005020222) wfdc1 (ENSMMDG00005020229) ENSMMDG00005020234 kcng4a (ENSMMDG00005020241) ENSMMDG00005004056 hsbp1a (ENSMMDG00005004064) ENSMMDG00005004166 mlycd (ENSMMDG00005006081) CDH13 (ENSMMDG00005006083) ccnd2a (ENSMMDG00005006088) tigara (ENSMMDG00005006092) ENSMMDG00005006095 FGF6 (ENSMMDG00005006096) zgc:77158 (ENSMMDG00005006098) zgc:154077 (ENSMMDG00005006100) e2f4 (ENSMMDG00005006103) #22 ELMO3 (ENSMMDG00005006132) #23 ENSMMDG00005008653 #24 ENSMMDG00005008656 zgc:193812 (ENSMMDG00005008659) ENSMMDG00005008663 zgc:114188 (ENSMMDG00005008665) PCLAF (ENSMMDG00005008678) FCSK (ENSMMDG00005008683) commd9 (ENSMMDG00005008720) ENSMMDG00005008722 ENSMMDG00005008727 nedd1 (ENSMMDG00005008728) hsf4 (ENSMMDG00005008729) #18 ENSMMDG00005008734 cbfb (ENSMMDG00005008744) #13 Clupeocephala ANCESTRAL SPECIES 16 ENSGT00940000161773 ENSGT00990000203752 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000008139 #25 ENSGT00940000157918 ENSGT00940000154022.a.a ENSGT00940000162283.b ENSGT00940000158758 ENSGT00390000017790 ENSGT00940000165402 ENSGT00940000155568 ENSGT00940000163723.A.e ENSGT00940000163723.A.f.b ENSGT01050000244900.a.a.b ENSGT00940000158565 ENSGT00940000153561.b.a.a.b ENSGT00940000164361 ENSGT00730000111007.a.b Euteleosteomorpha ANCESTRAL SPECIES 94 ENSGT00940000153717.b.h #36 ENSGT00940000158111 ENSGT00940000161131.b.a.b ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000003044 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000158494 ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00990000203752 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000177011 ENSGT00940000159749 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.a ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b Protacanthopterygii ANCESTRAL SPECIES 2 ENSGT00940000161131.b.a.b ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000003044 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000158494 ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000182991.A.a.c.b.m ENSGT00950000183108.b.a.a.i.a ENSGT00990000203851.b ENSGT00950000183082.a ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.a ENSGT00390000011085.d.a ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b ENSGT00940000159115 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 67 ENSGT00940000157764.e.a ENSGT00940000161773.a.a ENSGT00950000182991.A.a.c.b.m.b.a ENSGT00940000161773.b ENSGT00950000183108.b.a.a.i.a.e ENSGT00950000183082.a.p.b ENSGT00940000158136.j ENSGT00880000138014.a.i ENSGT00940000156252.pb.b.b #22 ENSGT00990000203851.b ENSGT00940000161773.a.b ENSGT00950000183108.b.a.a.i.a.f ENSGT00950000183082.a.p.a ENSGT00940000158136.i ENSGT00880000138014.a.j ENSGT00940000156252.pb.b.a #22 ENSGT00940000163301.c.a.a.a.h ENSGT00950000182957.a.a.b.tb.b.b ENSGT00940000157220.a.g ENSGT00940000158881.o ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749.e ENSGT00940000165218.a.b ENSGT00900000141128.g.b ENSGT00940000168437.a ENSGT00940000153229.A.a.a.a.o.a ENSGT00390000011085.d.b ENSGT00390000015359.d.a ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b Salmoninae_a ANCESTRAL SPECIES 73 ENSGT00940000154285.b.b.d ENSGT00940000161131.b.a.b.b ENSGT00940000156501.e.a ENSGT00390000003044.c ENSGT00390000006585.d ENSGT00530000063853.a.b.d.c ENSGT00940000158494.k ENSGT00940000161773.b ENSGT00950000183108.b.a.a.i.a.e.a ENSGT00950000183082.a.p.b ENSGT00990000203851.b ENSGT00940000158136.j ENSGT00880000138014.a.i ENSGT00940000156252.pb.b.b #22 ENSGT00940000163301.c.a.a.a.h ENSGT00940000156252.pb.b.a #22 ENSGT00950000182957.a.b.s.a ENSGT00950000182957.a.a.b.tb.b.a ENSGT00940000157220.a.h ENSGT00940000158881.p ENSGT00950000182844.b.b.b.a.a.e ENSGT01010000223406.B ENSGT00940000159749.f ENSGT00940000165218.a.a ENSGT00900000141128.g.a ENSGT00940000168437.b ENSGT00940000153229.A.a.a.a.o.b ENSGT00390000011085.d.a.b ENSGT00390000015359.d.b Salmo ANCESTRAL SPECIES 27 ENSGT00940000153717.b.h.a #36 ENSGT00940000158111.g ENSGT00940000174693 ENSGT00940000156501.e.b ENSGT00390000003044.d ENSGT00390000006585.c ENSGT00530000063853.a.b.d.d ENSGT00940000158494.l ENSGT00940000157764.e.a ENSGT00940000161773.a.a ENSGT00950000182991.A.a.c.b.m.b.a ENSGT00950000183108.b.a.a.i.a.e.b ENSGT00950000183082.a.p.a ENSGT00940000158136.i ENSGT00880000138014.a.j ENSGT00940000156252.pb.b.a #22 ENSGT00940000156252.pb.b.b #22 ENSGT00940000163301.c.a.a.a.h ENSGT00950000182957.a.b.s.a ENSGT00940000157220.a.g ENSGT00940000158881.o ENSGT00950000182844.b.b.b.a.a.f ENSGT00940000159749.e ENSGT01010000223406.A ENSGT00940000165218.a.b ENSGT00900000141128.g.b ENSGT00940000168437.a ENSGT00940000153229.A.a.a.a.p ENSGT00390000011085.d.a.a ENSGT00390000015359.d.a ENSGT00390000002290.j Atlantic salmon MODERN SPECIES 2 ENSSSAG00000095207 #37 ENSSSAG00000027004 #36 vrk3 (ENSSSAG00000028164) ENSSSAG00000117857 ENSSSAG00000028719 ENSSSAG00000028891 ENSSSAG00000029006 nrn1lb (ENSSSAG00000118447) ENSSSAG00000029541 ENSSSAG00000029832 ENSSSAG00000029895 ENSSSAG00000030021 AATM (ENSSSAG00000030661) ENSSSAG00000039223 ENSSSAG00000039325 ENSSSAG00000039371 #22 ENSSSAG00000042768 ENSSSAG00000039424 ENSSSAG00000082472 furina (ENSSSAG00000039603) fes (ENSSSAG00000040885) ENSSSAG00000039071 ENSSSAG00000105164 kif7 (ENSSSAG00000041141) ENSSSAG00000043643 ENSSSAG00000043685 ENSSSAG00000041232 ENSSSAG00000049696 ENSSSAG00000049679 TCF25 (ENSSSAG00000041510) MC1R (ENSSSAG00000117879) River trout MODERN SPECIES 3 ENSSTUG00000050488 #36 vrk3 (ENSSTUG00000050490) ENSSTUG00000050494 gfod2 (ENSSTUG00000050496) ENSSTUG00000050497 thap11 (ENSSTUG00000050500) nrn1lb (ENSSTUG00000050503) dnaaf1 (ENSSTUG00000050505) SLC38A8 (ENSSTUG00000050509) cmtr2 (ENSSTUG00000050516) ENSSTUG00000050518 calb2b (ENSSTUG00000050525) got2b (ENSSTUG00000050533) slc38a7 (ENSSTUG00000050541) si:ch211-122f10.4 (ENSSTUG00000050544) E2F4 (ENSSTUG00000050548) #22 ENSSTUG00000050549 furina (ENSSTUG00000050577) fes (ENSSTUG00000050647) RHCG (ENSSTUG00000050653) kif7 (ENSSTUG00000019458) ENSSTUG00000019465 ENSSTUG00000019473 ENSSTUG00000019492 ENSSTUG00000019515 ENSSTUG00000019520 pdcd5 (ENSSTUG00000019531) mvda (ENSSTUG00000019621) cyba (ENSSTUG00000019633) tcf25 (ENSSTUG00000019665) mc1r (ENSSTUG00000020496) Oncorhynchus ANCESTRAL SPECIES 32 ENSGT00940000153717.b.h.a #36 ENSGT00940000158111.g ENSGT00940000161131.b.a.b.a ENSGT00940000156501.e.b ENSGT00390000003044.d ENSGT00390000006585.c.a ENSGT00530000063853.a.b.d.d ENSGT00940000158494.l ENSGT00940000157764.e.a ENSGT00940000161773.a.a ENSGT00950000182991.A.a.c.b.m.a ENSGT00950000183108.b.a.a.i.a.e.b ENSGT00950000183082.a.p.a ENSGT00940000158136.i ENSGT00880000138014.a.j.a ENSGT00940000156252.pb.b.a #22 ENSGT00950000182957.a.a.b.tb.b.b ENSGT00940000157220.a.g ENSGT00940000158881.o ENSGT00950000182844.b.b.b.a.a.f ENSGT00940000159749.e ENSGT01010000223406.A ENSGT00940000165218.a.a.b ENSGT00900000141128.g.b ENSGT00940000168437.a ENSGT00940000153229.A.a.a.a.o.a ENSGT00390000011085.d.b ENSGT00390000015359.d.a ENSGT00390000002290.k ENSGT00390000005563.e ENSGT01030000234510.b.f Oncorhynchus_a ANCESTRAL SPECIES 28 ENSGT00940000153717.b.h.a #36 ENSGT00940000158111.g ENSGT00940000161131.b.a.b.a ENSGT00940000156501.e.b ENSGT00390000003044.d ENSGT00390000006585.c.a ENSGT00530000063853.a.b.d.d ENSGT00940000158494.l ENSGT00940000157764.e.a ENSGT00940000161773.a.a ENSGT00950000182991.A.a.c.b.m.a ENSGT00950000183108.b.a.a.i.a.e.b ENSGT00950000183082.a.p.a ENSGT00940000158136.i ENSGT00880000138014.a.j.a ENSGT00940000156252.pb.b.a #22 ENSGT00950000182957.a.a.b.tb.b.b ENSGT00940000157220.a.g ENSGT00940000158881.o ENSGT00950000182844.b.b.b.a.a.f ENSGT00940000159749.e ENSGT01010000223406.A ENSGT00940000165218.a.a.b ENSGT00900000141128.g.b ENSGT00940000168437.a ENSGT00940000153229.A.a.a.a.o.a ENSGT00390000011085.d.b ENSGT00390000015359.d.a ENSGT00390000002290.k ENSGT00390000005563.e ENSGT01030000234510.b.f Coho salmon MODERN SPECIES 28 vrk3 (ENSOKIG00005050652) ENSOKIG00005050667 gfod2 (ENSOKIG00005050668) ENSOKIG00005050672 thap11 (ENSOKIG00005001863) ENSOKIG00005001875 dnaaf1 (ENSOKIG00005001892) ENSOKIG00005001901 cmtr2 (ENSOKIG00005001909) ENSOKIG00005001915 ENSOKIG00005001922 CALB2 (ENSOKIG00005001932) ENSOKIG00005002229 SLC38A7 (ENSOKIG00005003175) si:ch211-122f10.4 (ENSOKIG00005003183) E2F4 (ENSOKIG00005003200) #22 ENSOKIG00005003208 ENSOKIG00005003211 ENSOKIG00005003222 ENSOKIG00005003232 furina (ENSOKIG00005003290) fes (ENSOKIG00005003802) RHCG (ENSOKIG00005003956) kif7 (ENSOKIG00005004124) ENSOKIG00005004152 ENSOKIG00005004171 ENSOKIG00005004366 ENSOKIG00005004417 ENSOKIG00005004435 PDCD5 (ENSOKIG00005004452) mvda (ENSOKIG00005004539) Chinook salmon MODERN SPECIES 3 ENSOTSG00005016803 ENSOTSG00005016805 #37 vrk3 (ENSOTSG00005016806) ENSOTSG00005016808 ENSOTSG00005016809 thap11 (ENSOTSG00005016810) nrn1lb (ENSOTSG00005016811) dnaaf1 (ENSOTSG00005016813) ENSOTSG00005016814 cmtr2 (ENSOTSG00005016815) ENSOTSG00005016816 calb2b (ENSOTSG00005016818) got2b (ENSOTSG00005016821) slc38a7 (ENSOTSG00005016827) si:ch211-122f10.4 (ENSOTSG00005016832) E2F4 (ENSOTSG00005016835) #22 ENSOTSG00005016836 ENSOTSG00005016837 furina (ENSOTSG00005016838) fes (ENSOTSG00005016874) RHCG (ENSOTSG00005017521) kif7 (ENSOTSG00005017614) ENSOTSG00005017617 ENSOTSG00005017619 ENSOTSG00005017622 ENSOTSG00005017624 ENSOTSG00005017625 pdcd5 (ENSOTSG00005017627) mvda (ENSOTSG00005017636) cyba (ENSOTSG00005017638) tcf25 (ENSOTSG00005017640) Huchen MODERN SPECIES 134 ENSHHUG00000021349 gfod2 (ENSHHUG00000021343) ENSHHUG00000021338 ENSHHUG00000021318 thap11 (ENSHHUG00000021315) nrn1lb (ENSHHUG00000021304) dnaaf1 (ENSHHUG00000021282) SLC38A8 (ENSHHUG00000021231) cmtr2 (ENSHHUG00000021228) ENSHHUG00000021214 CALB2 (ENSHHUG00000021201) ENSHHUG00000021184 got2b (ENSHHUG00000020997) slc38a7 (ENSHHUG00000020978) si:ch211-122f10.4 (ENSHHUG00000020969) E2F4 (ENSHHUG00000020958) #22 ENSHHUG00000020957 ENSHHUG00000020942 ENSHHUG00000020938 ENSHHUG00000020895 ENSHHUG00000020890 furina (ENSHHUG00000020820) fes (ENSHHUG00000020551) RHCG (ENSHHUG00000020275) ENSHHUG00000020264 kif7 (ENSHHUG00000020259) ENSHHUG00000020256 ENSHHUG00000020254 ENSHHUG00000020251 ENSHHUG00000020245 ENSHHUG00000020243 Salmoninae ANCESTRAL SPECIES 67 ENSGT00940000155112.A.d.b ENSGT00940000156672.o.b.a #37 ENSGT00940000153717.b.h.a #36 ENSGT00940000158111.g ENSGT00940000174693 ENSGT00940000156501.e.b ENSGT00940000158494.l ENSGT00940000157764.e.a ENSGT00940000161773.a.a ENSGT00950000182991.A.a.c.b.m.b.a ENSGT00940000161773.b ENSGT00950000183108.b.a.a.i.a.e ENSGT00950000183082.a.p.b ENSGT00940000158136.j ENSGT00880000138014.a.i ENSGT00940000156252.pb.b.b #22 ENSGT00990000203851.b ENSGT00940000161773.a.b ENSGT00950000183108.b.a.a.i.a.f ENSGT00950000183082.a.p.a ENSGT00940000158136.i ENSGT00880000138014.a.j ENSGT00940000156252.pb.b.a #22 ENSGT00940000163301.c.a.a.a.h ENSGT00950000182957.a.a.b.tb.b.b ENSGT00940000157220.a.g ENSGT00940000158881.o ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749.e ENSGT00940000165218.a.b ENSGT00900000141128.g.b Salmoninae_a ANCESTRAL SPECIES 73 ENSGT00940000153717.b.h.b #36 ENSGT00940000158111.h ENSGT00940000154285.b.b.d ENSGT00940000161131.b.a.b.b ENSGT00940000156501.e.a ENSGT00390000003044.c ENSGT00390000006585.d ENSGT00530000063853.a.b.d.c ENSGT00940000158494.k ENSGT00940000161773.b ENSGT00950000183108.b.a.a.i.a.e.a ENSGT00950000183082.a.p.b ENSGT00990000203851.b ENSGT00940000158136.j ENSGT00880000138014.a.i ENSGT00940000156252.pb.b.b #22 ENSGT00940000163301.c.a.a.a.h ENSGT00940000156252.pb.b.a #22 ENSGT00950000182957.a.b.s.a ENSGT00950000182957.a.a.b.tb.b.a ENSGT00940000157220.a.h ENSGT00940000158881.p ENSGT00950000182844.b.b.b.a.a.e ENSGT01010000223406.B ENSGT00940000159749.f ENSGT00940000165218.a.a ENSGT00900000141128.g.a ENSGT00940000168437.b ENSGT00940000153229.A.a.a.a.o.b ENSGT00390000011085.d.a.b ENSGT00390000015359.d.b Oncorhynchus ANCESTRAL SPECIES ENSGT00940000158111.h ENSGT00940000154285.b.b.d ENSGT00940000161131.b.a.b.b ENSGT00940000156501.e.a ENSGT00390000006585.d ENSGT00390000003044.c ENSGT00390000006585.c.b ENSGT00530000063853.a.b.d.c ENSGT00940000158494.k ENSGT00940000161773.b ENSGT00950000183108.b.a.a.i.a.e.a ENSGT00950000183082.a.p.b ENSGT00990000203851.b ENSGT00940000158136.j ENSGT00880000138014.a.i ENSGT00940000156252.pb.b.b #22 ENSGT00940000163301.c.a.a.a.h ENSGT00950000182957.a.b.s.a ENSGT00950000182957.a.a.b.tb.b.a ENSGT00940000157220.a.h ENSGT00940000158881.p ENSGT00950000182844.b.b.b.a.a.e ENSGT00940000159749.f ENSGT01010000223406.B ENSGT00940000165218.a.a.a ENSGT00900000141128.g.a ENSGT00940000168437.b.a ENSGT00940000153229.A.a.a.a.o.b ENSGT00390000011085.c ENSGT00390000015359.d.b ENSGT00390000002290.l Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000158111.h ENSGT00940000154285.b.b.d ENSGT00940000161131.b.a.b.b ENSGT00940000156501.e.a ENSGT00390000006585.d ENSGT00390000003044.c ENSGT00390000006585.c.b ENSGT00530000063853.a.b.d.c ENSGT00940000158494.k ENSGT00940000161773.b ENSGT00950000183108.b.a.a.i.a.e.a ENSGT00950000183082.a.p.b ENSGT00990000203851.b ENSGT00940000158136.j ENSGT00880000138014.a.i ENSGT00940000156252.pb.b.b #22 ENSGT00940000163301.c.a.a.a.h ENSGT00950000182957.a.b.s.a ENSGT00950000182957.a.a.b.tb.b.a ENSGT00940000157220.a.h ENSGT00940000158881.p ENSGT00950000182844.b.b.b.a.a.e ENSGT00940000159749.f ENSGT01010000223406.B ENSGT00940000165218.a.a.a ENSGT00900000141128.g.a ENSGT00940000168437.b.a ENSGT00390000011085.c ENSGT00390000015359.d.b ENSGT00390000002290.l ENSGT00390000005563.f Chinook salmon MODERN SPECIES 28 ogfod1 (ENSOTSG00005012392) nudt21 (ENSOTSG00005012393) ENSOTSG00005012395 CTCF (ENSOTSG00005012404) #37 vrk3 (ENSOTSG00005012406) ENSOTSG00005012407 ENSOTSG00005012408 gfod2 (ENSOTSG00005012409) thap11 (ENSOTSG00005012411) nrn1lb (ENSOTSG00005012412) ENSOTSG00005012414 ENSOTSG00005012416 got2b (ENSOTSG00005012419) slc38a7 (ENSOTSG00005012792) si:ch211-122f10.4 (ENSOTSG00005012794) E2F4 (ENSOTSG00005012804) #22 ENSOTSG00005012806 ENSOTSG00005012817 ENSOTSG00005012819 ENSOTSG00005012820 ENSOTSG00005012821 ENSOTSG00005012822 mns1 (ENSOTSG00005012823) tex9 (ENSOTSG00005012827) RFX7 (ENSOTSG00005012828) nedd4a (ENSOTSG00005012829) PRTG (ENSOTSG00005013203) pygo1 (ENSOTSG00005013238) ENSOTSG00005013239 pigb (ENSOTSG00005013240) rab27a (ENSOTSG00005013245) Coho salmon MODERN SPECIES 22 ENSOKIG00005020125 #36 vrk3 (ENSOKIG00005020140) ENSOKIG00005020184 ENSOKIG00005020196 gfod2 (ENSOKIG00005020224) ENSOKIG00005020239 thap11 (ENSOKIG00005020249) nrn1lb (ENSOKIG00005020254) dnaaf1 (ENSOKIG00005020262) CMTR2 (ENSOKIG00005020281) CALB2 (ENSOKIG00005020337) got2b (ENSOKIG00005020412) ENSOKIG00005020580 slc38a7 (ENSOKIG00005020592) ENSOKIG00005020612 E2F4 (ENSOKIG00005020629) #22 ENSOKIG00005020643 ENSOKIG00005020924 furina (ENSOKIG00005020983) fes (ENSOKIG00005021181) ENSOKIG00005021645 RHCG (ENSOKIG00005021712) kif7 (ENSOKIG00005022124) ENSOKIG00005022156 ENSOKIG00005022173 ENSOKIG00005022182 ENSOKIG00005022212 ENSOKIG00005022227 ENSOKIG00005022237 PDCD5 (ENSOKIG00005022246) mvda (ENSOKIG00005022270) Rainbow trout MODERN SPECIES 27 ENSOMYG00000020699 gfod2 (ENSOMYG00000020714) ENSOMYG00000075072 ENSOMYG00000020730 thap11 (ENSOMYG00000020748) nrn1lb (ENSOMYG00000064947) ENSOMYG00000020792 ENSOMYG00000020834 ENSOMYG00000020867 ENSOMYG00000020925 ENSOMYG00000020963 ENSOMYG00000020965 ENSOMYG00000020980 ENSOMYG00000020997 ENSOMYG00000076127 ENSOMYG00000021010 #22 ENSOMYG00000021042 ENSOMYG00000021166 furina (ENSOMYG00000021269) ENSOMYG00000070883 fes (ENSOMYG00000021553) ENSOMYG00000048208 rhcg (ENSOMYG00000021891) kif7 (ENSOMYG00000022994) ENSOMYG00000023012 ENSOMYG00000073438 ENSOMYG00000023022 ENSOMYG00000023036 ENSOMYG00000023067 ENSOMYG00000023079 ENSOMYG00000023143 Salmo ANCESTRAL SPECIES 27 ENSGT00940000158111.g ENSGT00940000174693 ENSGT00940000156501.e.b ENSGT00390000003044.d ENSGT00390000006585.c ENSGT00530000063853.a.b.d.d ENSGT00940000158494.l ENSGT00940000157764.e.a ENSGT00940000161773.a.a ENSGT00950000182991.A.a.c.b.m.b.a ENSGT00950000183108.b.a.a.i.a.e.b ENSGT00950000183082.a.p.a ENSGT00940000158136.i ENSGT00880000138014.a.j ENSGT00940000156252.pb.b.a #22 ENSGT00940000156252.pb.b.b #22 ENSGT00940000163301.c.a.a.a.h ENSGT00950000182957.a.b.s.a ENSGT00940000157220.a.g ENSGT00940000158881.o ENSGT00950000182844.b.b.b.a.a.f ENSGT00940000159749.e ENSGT01010000223406.A ENSGT00940000165218.a.b ENSGT00900000141128.g.b ENSGT00940000168437.a ENSGT00940000153229.A.a.a.a.p ENSGT00390000011085.d.a.a ENSGT00390000015359.d.a ENSGT00390000002290.j ENSGT00390000005563.h River trout MODERN SPECIES 21 ENSSTUG00000036128 CTCF (ENSSTUG00000036022) #37 ENSSTUG00000035996 #36 vrk3 (ENSSTUG00000035966) ENSSTUG00000035936 gfod2 (ENSSTUG00000035908) ENSSTUG00000035905 thap11 (ENSSTUG00000035898) nrn1lb (ENSSTUG00000019811) dnaaf1 (ENSSTUG00000019800) cmtr2 (ENSSTUG00000019760) CALB2 (ENSSTUG00000019733) got2b (ENSSTUG00000019216) slc38a7 (ENSSTUG00000019171) si:ch211-122f10.4 (ENSSTUG00000019147) E2F4 (ENSSTUG00000019122) #22 ENSSTUG00000019053 ENSSTUG00000019027 furina (ENSSTUG00000018534) fes (ENSSTUG00000017046) RHCG (ENSSTUG00000016555) ENSSTUG00000016534 kif7 (ENSSTUG00000016508) ENSSTUG00000016492 ENSSTUG00000016473 ENSSTUG00000016463 pdcd5 (ENSSTUG00000016412) mvda (ENSSTUG00000016354) cyba (ENSSTUG00000016340) tcf25 (ENSSTUG00000014347) mc1r (ENSSTUG00000014295) Northern pike MODERN SPECIES 1 ENSELUG00000028128 gfod2 (ENSELUG00000011758) ENSELUG00000011726 thap11 (ENSELUG00000011681) nrn1lb (ENSELUG00000034546) dnaaf1 (ENSELUG00000011663) SLC38A8 (ENSELUG00000011617) cmtr2 (ENSELUG00000011595) ENSELUG00000030803 calb2b (ENSELUG00000000417) ENSELUG00000000413 got2b (ENSELUG00000011538) slc38a7 (ENSELUG00000011478) si:ch211-122f10.4 (ENSELUG00000011466) ENSELUG00000031474 E2F4 (ENSELUG00000011406) #22 ENSELUG00000011338 ENSELUG00000027470 RHCG (ENSELUG00000011035) furina (ENSELUG00000011197) kif7 (ENSELUG00000011003) ENSELUG00000001372 CLEC18A (ENSELUG00000010944) ENSELUG00000010879 ENSELUG00000010861 pdcd5 (ENSELUG00000010839) mvda (ENSELUG00000010740) cyba (ENSELUG00000010707) tcf25 (ENSELUG00000010687) mc1r (ENSELUG00000010670) TUBB3 (ENSELUG00000010664) Acanthomorphata ANCESTRAL SPECIES 18 ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000177011 ENSGT00940000159749 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b ENSGT00940000159182 Cod MODERN SPECIES 5 ENSGMOG00000002872 ogfod1 (ENSGMOG00000002891) ENSGMOG00000002941 #16 gnao1b (ENSGMOG00000002957) ENSGMOG00000002976 gfod2 (ENSGMOG00000031970) thap11 (ENSGMOG00000022603) nrn1lb (ENSGMOG00000025675) ENSGMOG00000003106 ENSGMOG00000003051 ENSGMOG00000003058 ENSGMOG00000003080 ENSGMOG00000030996 ENSGMOG00000003135 ENSGMOG00000034773 #22 ENSGMOG00000022221 #22 ENSGMOG00000033959 furina (ENSGMOG00000000699) fes (ENSGMOG00000000712) rhcga (ENSGMOG00000000775) kif7 (ENSGMOG00000009645) ENSGMOG00000027253 ENSGMOG00000033280 ENSGMOG00000017502 ENSGMOG00000017455 ENSGMOG00000017449 ENSGMOG00000002943 ENSGMOG00000025350 ENSGMOG00000030712 ENSGMOG00000035094 ENSGMOG00000005299 Euacanthomorphacea ANCESTRAL SPECIES 23 ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000177011 ENSGT00940000159749 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b ENSGT00940000159182 Percomorphaceae ANCESTRAL SPECIES 15 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00990000203752 ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000177011 ENSGT00940000159749 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b ENSGT00940000159182 Percomorphaceae_B ANCESTRAL SPECIES 12 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00990000203752 ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Ovalentaria ANCESTRAL SPECIES 17 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00990000203752 ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Atherinomorphae ANCESTRAL SPECIES 8 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00990000203752 ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Cyprinodontiformes ANCESTRAL SPECIES 9 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Cyprinodontoidei ANCESTRAL SPECIES 6 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000177011 ENSGT00940000159749 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b.d ENSGT00970000193948 ENSGT00940000153229.A.a.a.b.c ENSGT00390000011085 ENSGT00390000015359 Poeciliinae ANCESTRAL SPECIES 13 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000177011 ENSGT00940000159749 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b.d ENSGT00970000193948 ENSGT00940000153229.A.a.a.b.c ENSGT00390000011085 ENSGT00390000015359 Poecilia ANCESTRAL SPECIES 4 ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b.d ENSGT00940000153229.A.a.a.b.c ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 NAME_6 ANCESTRAL SPECIES 5 ENSGT00390000015814.jc ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000177011 ENSGT00940000159749 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b.d ENSGT00940000153229.A.a.a.b.c ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 Amazon molly MODERN SPECIES 285 gfod2 (ENSPFOG00000018289) thap11 (ENSPFOG00000020599) nrn1lb (ENSPFOG00000018288) SLC38A8 (ENSPFOG00000018259) cmtr2 (ENSPFOG00000018254) calb2b (ENSPFOG00000018227) got2b (ENSPFOG00000021855) slc38a7 (ENSPFOG00000018191) si:ch211-122f10.4 (ENSPFOG00000018149) E2F4 (ENSPFOG00000022062) #22 ENSPFOG00000018132 ENSPFOG00000018070 furina (ENSPFOG00000018020) ENSPFOG00000017969 rhcga (ENSPFOG00000017943) kif7 (ENSPFOG00000017895) ENSPFOG00000017863 CLEC18A (ENSPFOG00000017840) ENSPFOG00000017836 uraha (ENSPFOG00000017833) uraha (ENSPFOG00000017832) pdcd5 (ENSPFOG00000017831) mvda (ENSPFOG00000017816) tcf25 (ENSPFOG00000017797) mc1r (ENSPFOG00000020598) Sailfin molly MODERN SPECIES 316 nudt21 (ENSPLAG00000016420) ogfod1 (ENSPLAG00000016431) tradd (ENSPLAG00000016454) #16 ENSPLAG00000016463 gnao1b (ENSPLAG00000016478) cog4 (ENSPLAG00000016540) ENSPLAG00000016570 gfod2 (ENSPLAG00000016595) thap11 (ENSPLAG00000016610) SLC38A8 (ENSPLAG00000016645) cmtr2 (ENSPLAG00000016653) CALB2 (ENSPLAG00000016681) got2b (ENSPLAG00000016701) slc38a7 (ENSPLAG00000016737) si:ch211-122f10.4 (ENSPLAG00000016743) E2F4 (ENSPLAG00000016756) #22 ENSPLAG00000016785 ENSPLAG00000016837 furina (ENSPLAG00000000384) Platyfish MODERN SPECIES 18 ogfod1 (ENSXMAG00000014150) tradd (ENSXMAG00000014149) #16 gnao1b (ENSXMAG00000014106) cog4 (ENSXMAG00000014085) ENSXMAG00000023314 gfod2 (ENSXMAG00000023804) thap11 (ENSXMAG00000019795) nrn1lb (ENSXMAG00000022055) SLC38A8 (ENSXMAG00000014067) cmtr2 (ENSXMAG00000014066) calb2b (ENSXMAG00000010503) got2b (ENSXMAG00000010511) slc38a7 (ENSXMAG00000010524) si:ch211-122f10.4 (ENSXMAG00000010542) ENSXMAG00000021092 ENSXMAG00000028836 #22 ENSXMAG00000010554 ENSXMAG00000010564 furina (ENSXMAG00000014039) fes (ENSXMAG00000014011) rhcga (ENSXMAG00000013993) ENSXMAG00000030017 kif7 (ENSXMAG00000013974) ENSXMAG00000002983 ENSXMAG00000002987 ENSXMAG00000026606 uraha (ENSXMAG00000029933) ENSXMAG00000025390 uraha (ENSXMAG00000021019) pdcd5 (ENSXMAG00000002998) mvda (ENSXMAG00000003003) NAME_4 ANCESTRAL SPECIES 53 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203752 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00940000169012 ENSGT00390000009477.s ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000165218.a ENSGT00940000168437 ENSGT00940000153229.A.a.a.b.d ENSGT00970000193948 ENSGT00940000153229.A.a.a.b.c ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Sheepshead minnow MODERN SPECIES 2002 got2b (ENSCVAG00000001811) slc38a7 (ENSCVAG00000001819) si:ch211-122f10.4 (ENSCVAG00000001835) ENSCVAG00000001841 #22 ENSCVAG00000001844 Oryzias ANCESTRAL SPECIES 13 ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00990000203752 ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000177011 ENSGT00940000159749 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b Oryzias_b ANCESTRAL SPECIES 5 ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00990000203752 ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000177011 ENSGT00940000159749 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b Indian medaka MODERN SPECIES 26 CTCF (ENSOMEG00000002356) #37 nudt21 (ENSOMEG00000002368) ogfod1 (ENSOMEG00000002382) tradd (ENSOMEG00000002387) #16 gnao1b (ENSOMEG00000002395) cog4 (ENSOMEG00000002411) gfod2 (ENSOMEG00000002422) thap11 (ENSOMEG00000000040) SLC38A8 (ENSOMEG00000002438) cmtr2 (ENSOMEG00000002443) calb2b (ENSOMEG00000002517) ENSOMEG00000002542 got2b (ENSOMEG00000000798) slc38a7 (ENSOMEG00000002579) si:ch211-122f10.4 (ENSOMEG00000002591) ENSOMEG00000002597 #22 ENSOMEG00000002607 ENSOMEG00000002636 furina (ENSOMEG00000002674) fes (ENSOMEG00000002720) rhcgl1 (ENSOMEG00000002745) ENSOMEG00000002752 kif7 (ENSOMEG00000002772) ENSOMEG00000002785 CLEC18A (ENSOMEG00000002795) uraha (ENSOMEG00000002800) pdcd5 (ENSOMEG00000002804) mvda (ENSOMEG00000002813) cyba (ENSOMEG00000002819) tcf25 (ENSOMEG00000001008) mc1r (ENSOMEG00000002838) Javanese ricefish MODERN SPECIES 17 nudt21 (ENSOJAG00000024001) ogfod1 (ENSOJAG00000024002) tradd (ENSOJAG00000024004) #16 gnao1b (ENSOJAG00000024006) cog4 (ENSOJAG00000024007) gfod2 (ENSOJAG00000024009) thap11 (ENSOJAG00000024011) nrn1lb (ENSOJAG00000024014) SLC38A8 (ENSOJAG00000024020) cmtr2 (ENSOJAG00000024022) calb2b (ENSOJAG00000024025) got2b (ENSOJAG00000024034) ENSOJAG00000024047 slc38a7 (ENSOJAG00000024048) si:ch211-122f10.4 (ENSOJAG00000024049) ENSOJAG00000024051 #22 ENSOJAG00000024052 ENSOJAG00000024053 furina (ENSOJAG00000004109) fes (ENSOJAG00000005660) rhcgl1 (ENSOJAG00000006079) kif7 (ENSOJAG00000007070) ENSOJAG00000007208 CLEC18A (ENSOJAG00000007233) uraha (ENSOJAG00000007300) pdcd5 (ENSOJAG00000007316) mvda (ENSOJAG00000007438) cyba (ENSOJAG00000007462) tcf25 (ENSOJAG00000007652) mc1r (ENSOJAG00000009037) def8 (ENSOJAG00000009072) Oryzias_a ANCESTRAL SPECIES 6 ENSGT00390000015814.jc ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203752 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b ENSGT00940000159182 Chinese medaka MODERN SPECIES 888 ENSOSIG00000020115 #36 CTCF (ENSOSIG00000020112) #37 nudt21 (ENSOSIG00000020098) ogfod1 (ENSOSIG00000020063) tradd (ENSOSIG00000020040) #16 gnao1b (ENSOSIG00000020022) cog4 (ENSOSIG00000019980) gfod2 (ENSOSIG00000019973) thap11 (ENSOSIG00000019971) nrn1lb (ENSOSIG00000019967) SLC38A8 (ENSOSIG00000019963) cmtr2 (ENSOSIG00000019957) CALB2 (ENSOSIG00000019950) slc38a7 (ENSOSIG00000019938) si:ch211-122f10.4 (ENSOSIG00000019929) ENSOSIG00000019916 #22 ENSOSIG00000019909 ENSOSIG00000019908 ENSOSIG00000019906 furina (ENSOSIG00000019708) rhcgl1 (ENSOSIG00000019405) kif7 (ENSOSIG00000019356) ENSOSIG00000019351 ENSOSIG00000019347 mvda (ENSOSIG00000019283) cyba (ENSOSIG00000019280) tcf25 (ENSOSIG00000019277) mc1r (ENSOSIG00000019258) def8 (ENSOSIG00000018393) ENSOSIG00000016805 DBNDD1 (ENSOSIG00000016748) Ovalentaria_B ANCESTRAL SPECIES 10 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00990000203752 ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b Cichlidae ANCESTRAL SPECIES 11 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203752 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Pseudocrenilabrinae ANCESTRAL SPECIES 13 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203752 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 248 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s Haplochromini ANCESTRAL SPECIES 247 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s Haplochromini_A ANCESTRAL SPECIES ENSGT00940000156252.pb.b #22 Haplochromini_B ANCESTRAL SPECIES 3 ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203752 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b ENSGT00940000159182 Eastern happy DUPLICATION Eastern happy MODERN SPECIES 3 adam28 (ENSACLG00000005313) ppp3cca (ENSACLG00000005362) vps37ba (ENSACLG00000005424) abcb9 (ENSACLG00000005433) zgc:113436 (ENSACLG00000005441) ogfod2 (ENSACLG00000005479) SLC4A5 (ENSACLG00000005488) zgc:110329 (ENSACLG00000005607) TACR1 (ENSACLG00000005634) ENSACLG00000005655 ENSACLG00000005662 ENSACLG00000005668 ncaph (ENSACLG00000005675) vamp8 (ENSACLG00000005712) ENSACLG00000005719 E2F4 (ENSACLG00000005726) #22 ENSACLG00000005740 ENSACLG00000005761 ENSACLG00000005767 ppm1f (ENSACLG00000005774) ENSACLG00000005780 ENSACLG00000005784 ENSACLG00000005788 ENSACLG00000005791 ENSACLG00000005800 TOP3B (ENSACLG00000005807) ENSACLG00000005867 ENSACLG00000005890 sdf2l1 (ENSACLG00000005901) marveld2b (ENSACLG00000005917) oclnb (ENSACLG00000005938) Eastern happy MODERN SPECIES nudt21 (ENSACLG00000004389) ogfod1 (ENSACLG00000004413) tradd (ENSACLG00000004420) #16 gnao1b (ENSACLG00000004434) cog4 (ENSACLG00000004490) ENSACLG00000004590 thap11 (ENSACLG00000004605) nrn1lb (ENSACLG00000004612) SLC38A8 (ENSACLG00000004627) cmtr2 (ENSACLG00000004652) calb2b (ENSACLG00000004659) got2b (ENSACLG00000004703) ENSACLG00000004746 slc38a7 (ENSACLG00000004764) si:ch211-122f10.4 (ENSACLG00000004786) E2F4 (ENSACLG00000004828) #22 ENSACLG00000004862 gas8 (ENSACLG00000004871) ENSACLG00000005092 furina (ENSACLG00000005106) fes (ENSACLG00000005169) rhcgl1 (ENSACLG00000005207) kif7 (ENSACLG00000005235) ENSACLG00000005272 ENSACLG00000005278 CLEC18A (ENSACLG00000005290) ENSACLG00000005889 uraha (ENSACLG00000005892) pdcd5 (ENSACLG00000005899) mvda (ENSACLG00000005929) cyba (ENSACLG00000005951) Zebra mbuna MODERN SPECIES 291 ENSMZEG00005000181 GOT2 (ENSMZEG00005000097) slc38a7 (ENSMZEG00005023782) si:ch211-122f10.4 (ENSMZEG00005023780) E2F4 (ENSMZEG00005023779) #22 ENSMZEG00005023778 furina (ENSMZEG00005023777) Burton s mouthbrooder MODERN SPECIES 278 nudt21 (ENSHBUG00000015015) ogfod1 (ENSHBUG00000015026) tradd (ENSHBUG00000015037) #16 cog4 (ENSHBUG00000015113) gnao1b (ENSHBUG00000015127) ENSHBUG00000015147 thap11 (ENSHBUG00000015163) nrn1lb (ENSHBUG00000015168) SLC38A8 (ENSHBUG00000015188) cmtr2 (ENSHBUG00000015196) CALB2 (ENSHBUG00000015230) ENSHBUG00000015260 got2b (ENSHBUG00000015286) slc38a7 (ENSHBUG00000015320) si:ch211-122f10.4 (ENSHBUG00000015374) E2F4 (ENSHBUG00000015389) #22 gas8 (ENSHBUG00000015405) ENSHBUG00000015483 furina (ENSHBUG00000015603) fes (ENSHBUG00000015619) rhcgl1 (ENSHBUG00000015655) ENSHBUG00000015678 kif7 (ENSHBUG00000015697) ENSHBUG00000015708 CLEC18A (ENSHBUG00000015722) ENSHBUG00000015739 uraha (ENSHBUG00000015750) pdcd5 (ENSHBUG00000015775) mvda (ENSHBUG00000015796) cyba (ENSHBUG00000015829) tcf25 (ENSHBUG00000000898) Nile tilapia MODERN SPECIES ogfod1 (ENSONIG00000030993) tradd (ENSONIG00000005732) #16 gnao1b (ENSONIG00000010197) cog4 (ENSONIG00000005726) ENSONIG00000031523 gfod2 (ENSONIG00000005724) thap11 (ENSONIG00000021394) nrn1lb (ENSONIG00000027516) SLC38A8 (ENSONIG00000005720) cmtr2 (ENSONIG00000005719) calb2b (ENSONIG00000005717) got2b (ENSONIG00000005716) slc38a7 (ENSONIG00000005715) si:ch211-122f10.4 (ENSONIG00000005712) ENSONIG00000005710 ENSONIG00000042681 #22 ENSONIG00000030749 furina (ENSONIG00000005696) fes (ENSONIG00000005687) rhcgl1 (ENSONIG00000005681) kif7 (ENSONIG00000005673) ENSONIG00000037743 ENSONIG00000005671 CLEC18A (ENSONIG00000005669) ENSONIG00000041611 uraha (ENSONIG00000030759) pdcd5 (ENSONIG00000005662) mvda (ENSONIG00000005658) CYBA (ENSONIG00000005654) ENSONIG00000042176 ENSONIG00000042033 Pomacentridae ANCESTRAL SPECIES 48 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00950000182957.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a Pomacentridae_A ANCESTRAL SPECIES 45 ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00950000182957.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a Amphiprion ANCESTRAL SPECIES 238 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a Clown anemonefish MODERN SPECIES 3254 got2b (ENSAOCG00000003360) ENSAOCG00000003350 slc38a7 (ENSAOCG00000003341) si:ch211-122f10.4 (ENSAOCG00000003327) ENSAOCG00000003308 #22 ENSAOCG00000003297 furina (ENSAOCG00000003273) fes (ENSAOCG00000003243) rhcgl1 (ENSAOCG00000003203) Orange clownfish MODERN SPECIES ENSAPEG00000013511 #36 vrk3 (ENSAPEG00000013526) rab27a (ENSAPEG00000013548) pigb (ENSAPEG00000013580) ENSAPEG00000013683 gfod2 (ENSAPEG00000013736) thap11 (ENSAPEG00000013752) nrn1lb (ENSAPEG00000013762) SLC38A8 (ENSAPEG00000013782) cmtr2 (ENSAPEG00000013930) calb2b (ENSAPEG00000013952) got2b (ENSAPEG00000014014) ENSAPEG00000014050 slc38a7 (ENSAPEG00000014082) si:ch211-122f10.4 (ENSAPEG00000014145) ENSAPEG00000014161 #22 ENSAPEG00000014173 furina (ENSAPEG00000014251) fes (ENSAPEG00000014314) rhcgl1 (ENSAPEG00000014432) emc8 (ENSAPEG00000014469) cox4i1 (ENSAPEG00000014489) dusp22a (ENSAPEG00000014506) irf8 (ENSAPEG00000014533) foxf1 (ENSAPEG00000014549) mthfsd (ENSAPEG00000014567) DBNDD1 (ENSAPEG00000014651) ENSAPEG00000014661 def8 (ENSAPEG00000014688) tcf25 (ENSAPEG00000014742) mc1r (ENSAPEG00000014793) Spiny chromis MODERN SPECIES 667 gnao1b (ENSAPOG00000012328) cog4 (ENSAPOG00000012294) ENSAPOG00000012215 gfod2 (ENSAPOG00000012207) thap11 (ENSAPOG00000012195) nrn1lb (ENSAPOG00000012183) SLC38A8 (ENSAPOG00000012176) cmtr2 (ENSAPOG00000012087) calb2b (ENSAPOG00000012074) got2b (ENSAPOG00000012031) ENSAPOG00000011993 slc38a7 (ENSAPOG00000011968) si:ch211-122f10.4 (ENSAPOG00000011914) E2F4 (ENSAPOG00000011855) #22 ENSAPOG00000011774 furina (ENSAPOG00000011734) fes (ENSAPOG00000011641) rhcgl1 (ENSAPOG00000011621) Bicolor damselfish MODERN SPECIES 1158 nrn1lb (ENSSPAG00000009254) SLC38A8 (ENSSPAG00000009279) cmtr2 (ENSSPAG00000009337) calb2b (ENSSPAG00000009347) got2b (ENSSPAG00000009373) ENSSPAG00000009407 slc38a7 (ENSSPAG00000009419) si:ch211-122f10.4 (ENSSPAG00000009445) ENSSPAG00000009468 ENSSPAG00000009479 #22 ENSSPAG00000009499 furina (ENSSPAG00000009514) fes (ENSSPAG00000009555) rhcga (ENSSPAG00000009572) Percomorphaceae_C ANCESTRAL SPECIES 11 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00990000203752 ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Eupercaria ANCESTRAL SPECIES 14 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00990000203752 ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b Eupecaria_A ANCESTRAL SPECIES 15 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00990000203752 ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b Ballan wrasse MODERN SPECIES 17 ogfod1 (ENSLBEG00000024421) tradd (ENSLBEG00000024379) #16 gnao1b (ENSLBEG00000024351) cog4 (ENSLBEG00000024250) ENSLBEG00000024168 gfod2 (ENSLBEG00000024139) thap11 (ENSLBEG00000024121) nrn1lb (ENSLBEG00000024113) SLC38A8 (ENSLBEG00000024093) cmtr2 (ENSLBEG00000024048) calb2b (ENSLBEG00000023988) ENSLBEG00000023943 got2b (ENSLBEG00000023906) slc38a7 (ENSLBEG00000023860) si:ch211-122f10.4 (ENSLBEG00000023831) E2F4 (ENSLBEG00000023814) #22 ENSLBEG00000023796 furina (ENSLBEG00000023742) fes (ENSLBEG00000023709) rhcgl1 (ENSLBEG00000023675) ENSLBEG00000023658 ENSLBEG00000023637 cnep1r1 (ENSLBEG00000023620) kif7 (ENSLBEG00000023550) heatr3 (ENSLBEG00000023484) tent4b (ENSLBEG00000023462) ENSLBEG00000023439 adcy7 (ENSLBEG00000023387) brd7 (ENSLBEG00000023304) nkd1 (ENSLBEG00000023259) nod2 (ENSLBEG00000023223) Eupecaria_B ANCESTRAL SPECIES 15 ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b Perciformes ANCESTRAL SPECIES 15 ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Perciformes_a ANCESTRAL SPECIES 13 ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Pike perch MODERN SPECIES 29 gnao1b (ENSSLUG00000024057) cog4 (ENSSLUG00000024125) ENSSLUG00000024244 ENSSLUG00000005274 ENSSLUG00000005302 gfod2 (ENSSLUG00000005313) thap11 (ENSSLUG00000005322) nrn1lb (ENSSLUG00000005329) SLC38A8 (ENSSLUG00000005342) cmtr2 (ENSSLUG00000005355) calb2b (ENSSLUG00000005373) got2b (ENSSLUG00000005435) ENSSLUG00000005904 slc38a7 (ENSSLUG00000005926) si:ch211-122f10.4 (ENSSLUG00000005952) E2F4 (ENSSLUG00000006008) #22 gas8 (ENSSLUG00000006018) ENSSLUG00000006025 ENSSLUG00000006032 ENSSLUG00000006039 furina (ENSSLUG00000006271) fes (ENSSLUG00000009992) rhcgl1 (ENSSLUG00000010124) ENSSLUG00000010287 kif7 (ENSSLUG00000010329) ENSSLUG00000010505 ENSSLUG00000010513 CLEC18A (ENSSLUG00000010532) ENSSLUG00000010559 uraha (ENSSLUG00000010567) pdcd5 (ENSSLUG00000010575) Channel bull blenny MODERN SPECIES 17 ogfod1 (ENSCGOG00000017113) tradd (ENSCGOG00000017203) #16 gnao1b (ENSCGOG00000017214) cog4 (ENSCGOG00000018074) ENSCGOG00000018219 gfod2 (ENSCGOG00000018222) thap11 (ENSCGOG00000018223) nrn1lb (ENSCGOG00000018224) SLC38A8 (ENSCGOG00000018226) cmtr2 (ENSCGOG00000018228) calb2b (ENSCGOG00000018230) ENSCGOG00000018263 got2b (ENSCGOG00000018271) slc38a7 (ENSCGOG00000018687) si:ch211-122f10.4 (ENSCGOG00000018700) E2F4 (ENSCGOG00000018733) #22 ENSCGOG00000018736 ENSCGOG00000018737 furina (ENSCGOG00000018765) fes (ENSCGOG00000019657) rhcga (ENSCGOG00000019805) kif7 (ENSCGOG00000019829) ENSCGOG00000019996 ENSCGOG00000019997 ENSCGOG00000020018 ENSCGOG00000020020 uraha (ENSCGOG00000020023) fut7 (ENSCGOG00000020027) pdcd5 (ENSCGOG00000020031) mvda (ENSCGOG00000020043) cyba (ENSCGOG00000020130) Eupecaria_C ANCESTRAL SPECIES 11 ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 7 ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 ENSGT01030000234510.b Large yellow croaker MODERN SPECIES 480 ogfod1 (ENSLCRG00005016989) tradd (ENSLCRG00005017016) #16 gnao1b (ENSLCRG00005017018) cog4 (ENSLCRG00005017048) ENSLCRG00005017051 gfod2 (ENSLCRG00005017054) thap11 (ENSLCRG00005017055) nrn1lb (ENSLCRG00005017057) SLC38A8 (ENSLCRG00005017060) cmtr2 (ENSLCRG00005017063) calb2b (ENSLCRG00005017066) got2b (ENSLCRG00005017070) ENSLCRG00005017098 slc38a7 (ENSLCRG00005017099) si:ch211-122f10.4 (ENSLCRG00005017100) E2F4 (ENSLCRG00005017101) #22 GAS8 (ENSLCRG00005017102) ENSLCRG00005017104 furina (ENSLCRG00005017118) ENSLCRG00005018732 ENSLCRG00005018768 rhcgl1 (ENSLCRG00005018787) kif7 (ENSLCRG00005019682) ENSLCRG00005019712 ENSLCRG00005019714 CLEC18A (ENSLCRG00005019716) ENSLCRG00005019718 uraha (ENSLCRG00005019719) mvda (ENSLCRG00005019722) cyba (ENSLCRG00005019724) tcf25 (ENSLCRG00005000183) Gilthead seabream MODERN SPECIES 18 nudt21 (ENSSAUG00010025792) ogfod1 (ENSSAUG00010025796) TRADD (ENSSAUG00010025820) #16 gnao1b (ENSSAUG00010025822) cog4 (ENSSAUG00010004259) ENSSAUG00010005062 gfod2 (ENSSAUG00010005063) thap11 (ENSSAUG00010005064) nrn1lb (ENSSAUG00010005065) SLC38A8 (ENSSAUG00010005067) cmtr2 (ENSSAUG00010005070) calb2b (ENSSAUG00010005072) got2b (ENSSAUG00010005082) slc38a7 (ENSSAUG00010005766) si:ch211-122f10.4 (ENSSAUG00010005776) ENSSAUG00010005804 #22 gas8 (ENSSAUG00010005807) ENSSAUG00010005810 furina (ENSSAUG00010005849) ENSSAUG00010007432 rhcgl1 (ENSSAUG00010007547) kif7 (ENSSAUG00010007666) ENSSAUG00010008242 ENSSAUG00010008246 CLEC18A (ENSSAUG00010008252) ENSSAUG00010008253 uraha (ENSSAUG00010008254) pdcd5 (ENSSAUG00010008257) mvda (ENSSAUG00010008276) cyba (ENSSAUG00010008288) tcf25 (ENSSAUG00010008308) Percomorphaceae_D ANCESTRAL SPECIES 11 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Anabantaria ANCESTRAL SPECIES 11 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203851 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Anabantoidei ANCESTRAL SPECIES 8 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00990000203851 ENSGT00950000183082.a ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000177011 ENSGT00940000159749 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Climbing perch MODERN SPECIES 16 ENSATEG00000025268 gnao1b (ENSATEG00000002226) cog4 (ENSATEG00000002154) ENSATEG00000002141 gfod2 (ENSATEG00000002128) thap11 (ENSATEG00000002112) nrn1lb (ENSATEG00000030066) ENSATEG00000002036 ENSATEG00000002030 ENSATEG00000001992 ENSATEG00000001962 ENSATEG00000001907 ENSATEG00000001898 ENSATEG00000001839 ENSATEG00000025879 ENSATEG00000001783 #22 ENSATEG00000001689 ENSATEG00000001566 furina (ENSATEG00000001463) fes (ENSATEG00000001453) rhcga (ENSATEG00000001327) kif7 (ENSATEG00000001313) ENSATEG00000001305 ENSATEG00000001269 ENSATEG00000001265 ENSATEG00000001250 ENSATEG00000001217 mvda (ENSATEG00000001183) ENSATEG00000001175 tcf25 (ENSATEG00000001124) MC1R (ENSATEG00000001166) Siamese fighting fish MODERN SPECIES 14 ogfod1 (ENSBSLG00000005944) tradd (ENSBSLG00000005932) #16 gnao1b (ENSBSLG00000005897) cog4 (ENSBSLG00000005478) ENSBSLG00000005409 gfod2 (ENSBSLG00000005397) thap11 (ENSBSLG00000005387) nrn1lb (ENSBSLG00000005338) SLC38A8 (ENSBSLG00000004974) cmtr2 (ENSBSLG00000004908) calb2b (ENSBSLG00000004804) ENSBSLG00000004729 got2b (ENSBSLG00000004640) slc38a7 (ENSBSLG00000004612) si:ch211-122f10.4 (ENSBSLG00000004610) E2F4 (ENSBSLG00000004608) #22 gas8 (ENSBSLG00000004602) furina (ENSBSLG00000004110) ENSBSLG00000002573 rhcga (ENSBSLG00000001610) ENSBSLG00000001529 kif7 (ENSBSLG00000001372) ENSBSLG00000001230 CLEC18A (ENSBSLG00000001211) ENSBSLG00000000933 uraha (ENSBSLG00000000931) pdcd5 (ENSBSLG00000000929) mvda (ENSBSLG00000000906) cyba (ENSBSLG00000000899) tcf25 (ENSBSLG00000000773) mc1r (ENSBSLG00000000703) Zig-zag eel MODERN SPECIES 17 ENSMAMG00000020936 #37 ENSMAMG00000020931 ogfod1 (ENSMAMG00000020925) gnao1b (ENSMAMG00000020918) ENSMAMG00000020900 gfod2 (ENSMAMG00000027667) thap11 (ENSMAMG00000020893) nrn1lb (ENSMAMG00000027812) ENSMAMG00000020870 ENSMAMG00000025153 ENSMAMG00000020857 ENSMAMG00000020843 ENSMAMG00000026055 ENSMAMG00000020832 ENSMAMG00000020822 ENSMAMG00000020818 #22 ENSMAMG00000020796 furina (ENSMAMG00000020774) fes (ENSMAMG00000020766) rhcga (ENSMAMG00000020753) kif7 (ENSMAMG00000020726) ENSMAMG00000028160 ENSMAMG00000020711 ENSMAMG00000020705 ENSMAMG00000020701 ENSMAMG00000020696 ENSMAMG00000020694 ENSMAMG00000020692 mvda (ENSMAMG00000020684) ENSMAMG00000025710 tcf25 (ENSMAMG00000020668) Carangaria ANCESTRAL SPECIES 11 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203752 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Carangaria_A ANCESTRAL SPECIES 20 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203752 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000169012 ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Seriola ANCESTRAL SPECIES 13 ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000174693 ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203752 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Greater amberjack MODERN SPECIES 1 ogfod1 (ENSSDUG00000019024) tradd (ENSSDUG00000019043) #16 gnao1b (ENSSDUG00000019056) cog4 (ENSSDUG00000019109) ENSSDUG00000019197 gfod2 (ENSSDUG00000019208) thap11 (ENSSDUG00000019217) nrn1lb (ENSSDUG00000019229) SLC38A8 (ENSSDUG00000019245) cmtr2 (ENSSDUG00000019312) calb2b (ENSSDUG00000019322) got2b (ENSSDUG00000019351) ENSSDUG00000019388 slc38a7 (ENSSDUG00000019407) si:ch211-122f10.4 (ENSSDUG00000019425) E2F4 (ENSSDUG00000019461) #22 gas8 (ENSSDUG00000019477) ENSSDUG00000019513 furina (ENSSDUG00000019557) fes (ENSSDUG00000019609) rhcga (ENSSDUG00000019666) kif7 (ENSSDUG00000019685) ENSSDUG00000019747 ENSSDUG00000019757 CLEC18A (ENSSDUG00000019779) ENSSDUG00000019797 uraha (ENSSDUG00000019806) ENSSDUG00000019813 pdcd5 (ENSSDUG00000019819) mvda (ENSSDUG00000019835) cyba (ENSSDUG00000019861) Yellowtail amberjack MODERN SPECIES 3255 ogfod1 (ENSSLDG00000018335) tradd (ENSSLDG00000018365) #16 gnao1b (ENSSLDG00000018383) cog4 (ENSSLDG00000018416) ENSSLDG00000018478 gfod2 (ENSSLDG00000018486) thap11 (ENSSLDG00000018491) nrn1lb (ENSSLDG00000018499) SLC38A8 (ENSSLDG00000018508) cmtr2 (ENSSLDG00000018543) calb2b (ENSSLDG00000018561) got2b (ENSSLDG00000018610) ENSSLDG00000018652 slc38a7 (ENSSLDG00000018665) si:ch211-122f10.4 (ENSSLDG00000018684) E2F4 (ENSSLDG00000018748) #22 gas8 (ENSSLDG00000018766) ENSSLDG00000018796 furina (ENSSLDG00000018863) fes (ENSSLDG00000018961) rhcga (ENSSLDG00000019055) kif7 (ENSSLDG00000019100) ENSSLDG00000019198 ENSSLDG00000019203 CLEC18A (ENSSLDG00000019219) ENSSLDG00000019235 uraha (ENSSLDG00000019249) pdcd5 (ENSSLDG00000019261) mvda (ENSSLDG00000019277) cyba (ENSSLDG00000019308) tcf25 (ENSSLDG00000019326) Barramundi perch MODERN SPECIES 107 tradd (ENSLCAG00010002223) #16 gnao1b (ENSLCAG00010002227) cog4 (ENSLCAG00010002242) ENSLCAG00010002258 gfod2 (ENSLCAG00010002260) thap11 (ENSLCAG00010002261) nrn1lb (ENSLCAG00010002264) SLC38A8 (ENSLCAG00010002266) cmtr2 (ENSLCAG00010002270) calb2b (ENSLCAG00010002271) got2b (ENSLCAG00010002302) ENSLCAG00010002340 slc38a7 (ENSLCAG00010002343) si:ch211-122f10.4 (ENSLCAG00010002350) ENSLCAG00010002354 ENSLCAG00010002356 #22 gas8 (ENSLCAG00010002360) ENSLCAG00010002365 furina (ENSLCAG00010002462) fes (ENSLCAG00010002898) rhcgl1 (ENSLCAG00010003057) kif7 (ENSLCAG00010003113) ENSLCAG00010003125 ENSLCAG00010003130 CLEC18A (ENSLCAG00010003135) ENSLCAG00010003138 uraha (ENSLCAG00010003141) pdcd5 (ENSLCAG00010003149) mvda (ENSLCAG00010003166) cyba (ENSLCAG00010003195) tcf25 (ENSLCAG00010003246) Pleuronectoidei ANCESTRAL SPECIES 10 ENSGT00390000015814.jc ENSGT00390000002349 ENSGT00390000002016 #16 ENSGT00940000155883.a.b.a.b ENSGT00940000154065.a ENSGT00940000156501 ENSGT00390000006585 ENSGT00530000063853.a.b.d ENSGT00940000157764.e.a ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a ENSGT00990000203752 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000009477.s ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00940000158881 ENSGT00950000182844.b.b.b.a.a ENSGT00940000159749 ENSGT00940000177011 ENSGT00940000165218.a ENSGT00900000141128 ENSGT00940000168437 ENSGT00940000153229.A.a.a.b ENSGT00390000011085 ENSGT00390000015359 ENSGT00390000002290 ENSGT00390000005563 Turbot MODERN SPECIES 17 ENSSMAG00000000644 #37 ENSSMAG00000000646 ogfod1 (ENSSMAG00000000654) tradd (ENSSMAG00000032874) #16 gnao1b (ENSSMAG00000000671) ENSSMAG00000000682 gfod2 (ENSSMAG00000000698) thap11 (ENSSMAG00000000701) nrn1lb (ENSSMAG00000031080) ENSSMAG00000000706 ENSSMAG00000000712 ENSSMAG00000000717 ENSSMAG00000000731 ENSSMAG00000000745 ENSSMAG00000000749 ENSSMAG00000000782 #22 ENSSMAG00000031011 ENSSMAG00000000790 ENSSMAG00000000809 furina (ENSSMAG00000000895) fes (ENSSMAG00000000911) rhcga (ENSSMAG00000000926) kif7 (ENSSMAG00000000961) ENSSMAG00000000973 ENSSMAG00000000988 ENSSMAG00000000992 ENSSMAG00000001025 ENSSMAG00000001038 ENSSMAG00000001058 mvda (ENSSMAG00000001078) ENSSMAG00000001094 Pinecone sodierfish MODERN SPECIES 17 ogfod1 (ENSMMDG00005000205) tradd (ENSMMDG00005000176) #16 gnao1b (ENSMMDG00005000121) cog4 (ENSMMDG00005000097) ENSMMDG00005000084 gfod2 (ENSMMDG00005014640) thap11 (ENSMMDG00005014636) nrn1lb (ENSMMDG00005014633) SLC38A8 (ENSMMDG00005014630) cmtr2 (ENSMMDG00005014624) calb2b (ENSMMDG00005014582) ENSMMDG00005014579 got2b (ENSMMDG00005013999) slc38a7 (ENSMMDG00005013987) si:ch211-122f10.4 (ENSMMDG00005013980) E2F4 (ENSMMDG00005013978) #22 ENSMMDG00005013976 kif7 (ENSMMDG00005013975) rhcgl1 (ENSMMDG00005013963) fes (ENSMMDG00005013844) furina (ENSMMDG00005009916) ENSMMDG00005009843 cd82a (ENSMMDG00005009840) kmt5b (ENSMMDG00005009834) pole3 (ENSMMDG00005009828) rpl12 (ENSMMDG00005009806) KCNG4 (ENSMMDG00005009798) zgc:194679 (ENSMMDG00005009794) ENSMMDG00005009793 ENSMMDG00005009786 tspan18a (ENSMMDG00005009782) Otomorpha ANCESTRAL SPECIES 374 ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00990000203752 ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000008139 #25 ENSGT00940000157918 ENSGT01080000257410.A.f.l ENSGT01050000244841.A.a.b.qb.a ENSGT00390000009995 ENSGT00940000154870.D.b ENSGT00940000161170.c ENSGT00510000048144 ENSGT00940000165857.a ENSGT00940000159833 Clupeiformes ANCESTRAL SPECIES 327 ENSGT00940000157349 ENSGT00940000162660.b.a ENSGT00390000015299.a.a.a ENSGT00940000155755.a.b ENSGT00940000155692.j ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00940000158136 ENSGT00880000138014.a ENSGT00940000156252.pb.b #22 ENSGT00390000008139 #25 ENSGT00390000001927.a.b.a ENSGT00940000153438.a.t ENSGT00940000159662.d ENSGT00940000156620 ENSGT00940000157667.d Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 12 ENSCHAG00000012741 slc39a13 (ENSCHAG00000012769) ENSCHAG00000012909 ano5b (ENSCHAG00000014778) cmtr2 (ENSCHAG00000014993) calb2b (ENSCHAG00000015003) ENSCHAG00000015030 ENSCHAG00000015061 ENSCHAG00000015831 ENSCHAG00000015860 ENSCHAG00000015901 GCNT3 (ENSCHAG00000015917) slc38a7 (ENSCHAG00000015947) si:ch211-122f10.4 (ENSCHAG00000016098) ENSCHAG00000016167 E2F4 (ENSCHAG00000016206) #22 tmem208 (ENSCHAG00000016264) #25 nucb2a (ENSCHAG00000016288) ENSCHAG00000016449 ENSCHAG00000016528 E2F4 (ENSCHAG00000016867) #22 ENSCHAG00000016909 nucb2a (ENSCHAG00000016986) ALX4 (ENSCHAG00000017520) ENSCHAG00000017532 ext2 (ENSCHAG00000017539) tspan18a (ENSCHAG00000017744) ENSCHAG00000017752 asns (ENSCHAG00000017770) ENSCHAG00000018060 ENSCHAG00000018080 Atlantic herring MODERN SPECIES 12 calb2b (ENSCHAG00000015003) ENSCHAG00000015030 ENSCHAG00000015061 ENSCHAG00000015831 ENSCHAG00000015860 ENSCHAG00000015901 GCNT3 (ENSCHAG00000015917) slc38a7 (ENSCHAG00000015947) si:ch211-122f10.4 (ENSCHAG00000016098) ENSCHAG00000016167 E2F4 (ENSCHAG00000016206) #22 tmem208 (ENSCHAG00000016264) #25 nucb2a (ENSCHAG00000016288) ENSCHAG00000016449 ENSCHAG00000016528 E2F4 (ENSCHAG00000016867) #22 ENSCHAG00000016909 nucb2a (ENSCHAG00000016986) ALX4 (ENSCHAG00000017520) ENSCHAG00000017532 ext2 (ENSCHAG00000017539) tspan18a (ENSCHAG00000017744) ENSCHAG00000017752 asns (ENSCHAG00000017770) ENSCHAG00000018060 ENSCHAG00000018080 ENSCHAG00000018107 ENSCHAG00000018115 ENSCHAG00000018124 ENSCHAG00000018152 ENSCHAG00000018174 Denticle herring DUPLICATION Denticle herring DUPLICATION Denticle herring MODERN SPECIES 150 ENSDCDG00000009582 #22 ENSDCDG00000009575 ENSDCDG00000009565 ENSDCDG00000009556 nucb2a (ENSDCDG00000009528) caprin1a (ENSDCDG00000009502) ENSDCDG00000009485 ENSDCDG00000008796 Denticle herring MODERN SPECIES 276 CALB2 (ENSDCDG00000012396) slc38a7 (ENSDCDG00000012470) si:ch211-122f10.4 (ENSDCDG00000012484) ENSDCDG00000012488 ENSDCDG00000012491 #22 Denticle herring MODERN SPECIES 277 slc39a13 (ENSDCDG00000031031) ENSDCDG00000031018 ENSDCDG00000031003 ano5b (ENSDCDG00000030065) cmtr2 (ENSDCDG00000030036) ano5b (ENSDCDG00000028844) ENSDCDG00000028691 ENSDCDG00000028664 ENSDCDG00000028658 slc39a13 (ENSDCDG00000028656) ENSDCDG00000028632 ENSDCDG00000028623 slc38a7 (ENSDCDG00000028613) E2F4 (ENSDCDG00000028604) #22 si:ch211-122f10.4 (ENSDCDG00000028572) ENSDCDG00000028570 nucb2a (ENSDCDG00000028564) caprin1a (ENSDCDG00000028555) ENSDCDG00000028552 ENSDCDG00000028546 ENSDCDG00000028527 ENSDCDG00000028523 ENSDCDG00000028522 ENSDCDG00000028521 ALX4 (ENSDCDG00000028514) ext2 (ENSDCDG00000028339) hddc3 (ENSDCDG00000028335) mfap1 (ENSDCDG00000028333) hypk (ENSDCDG00000028330) Clupeocephala ANCESTRAL SPECIES 215 ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00950000183074.A.a.b ENSGT00940000178074 ENSGT00530000063668.A.c ENSGT00940000154920.bb.a ENSGT00950000183154.b.a.a.b Euteleosteomorpha ANCESTRAL SPECIES 97 ENSGT00940000162952.d.b.b ENSGT00940000162952.c ENSGT00940000153497.E ENSGT00940000158435 ENSGT00390000015520 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a ENSGT00510000046981.b.b ENSGT00980000198875 ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00950000183074.A.a.b ENSGT00940000178074 ENSGT00530000063668.A.c ENSGT00940000154920.bb.a ENSGT00950000183154.b.a.a.b Acanthomorphata ANCESTRAL SPECIES ENSGT00940000162952.d.b.b ENSGT00940000162952.c ENSGT00940000153497.E ENSGT00940000158435 ENSGT00390000015520 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a ENSGT00510000046981.b.b ENSGT00980000198875 ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00950000183074.A.a.b ENSGT00940000178074 ENSGT00530000063668.A.c ENSGT00940000154920.bb.a ENSGT00950000183154.b.a.a.b Cod MODERN SPECIES 22 ENSGMOG00000012330 ENSGMOG00000009719 ENSGMOG00000015301 ENSGMOG00000015244 ENSGMOG00000036125 zgc:154077 (ENSGMOG00000004799) ENSGMOG00000016996 ENSGMOG00000016990 ENSGMOG00000028923 ENSGMOG00000032012 ENSGMOG00000033084 ENSGMOG00000002627 ENSGMOG00000030917 ENSGMOG00000030182 ENSGMOG00000023399 ENSGMOG00000027032 #22 ENSGMOG00000009445 #22 ENSGMOG00000009455 #23 RASSF9 (ENSGMOG00000036984) ENSGMOG00000007917 SLC6A15 (ENSGMOG00000016828) lrrk2 (ENSGMOG00000016854) slc2a13b (ENSGMOG00000016924) KIF21A (ENSGMOG00000016941) ENSGMOG00000015342 ENSGMOG00000003460 ENSGMOG00000003430 ENSGMOG00000003418 ENSGMOG00000023944 ENSGMOG00000003407 ENSGMOG00000013409 Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00940000162952.c ENSGT00940000153497.E ENSGT00940000158435 ENSGT00390000015520 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00980000198875 ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT00940000168373 ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00940000178074 ENSGT00950000183074.A.a.b ENSGT00530000063668.A.c ENSGT00940000154920.bb.a Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00940000162952.c ENSGT00940000153497.E ENSGT00940000158435 ENSGT00390000015520 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00980000198875 ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT00940000168373 ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00940000178074 ENSGT00950000183074.A.a.b ENSGT00530000063668.A.c ENSGT00940000154920.bb.a Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00940000162952.c ENSGT00940000153497.E ENSGT00940000158435 ENSGT00390000015520 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00980000198875 ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00940000181423 ENSGT00440000033408.a.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.b ENSGT01050000244842.a.a.b.b.b.h.b.a ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00950000183074.A.a.b Ovalentaria ANCESTRAL SPECIES 5 ENSGT00940000162952.d.b.b ENSGT00940000162952.c ENSGT00940000153497.E ENSGT00940000158435 ENSGT00940000178969 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00940000181423 ENSGT00440000033408.a.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.b ENSGT01050000244842.a.a.b.b.b.h.b.a ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00950000183074.A.a.b Atherinomorphae ANCESTRAL SPECIES 4 ENSGT00940000158753 ENSGT00940000161753 ENSGT00940000153497.E ENSGT00940000158435 ENSGT00940000178969 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b.g ENSGT00940000177582 ENSGT01030000234575.c.b ENSGT01050000244842.b ENSGT01050000244842.a.a.b.b.b.h.b.b ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00940000158753 ENSGT00940000161753 ENSGT00940000153497.E ENSGT00940000158435 ENSGT00940000178969 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT01050000244842.a.a.b.b.b.g ENSGT00940000177582 ENSGT01030000234575.c.b ENSGT01050000244842.b ENSGT01050000244842.a.a.b.b.b.h.b.b ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00950000183074.A.a.b Aplocheiloidei ANCESTRAL SPECIES 11 ENSGT00940000155404.i.a ENSGT00940000157375.d ENSGT00940000158753 ENSGT00940000161753 ENSGT00940000153497.E ENSGT00940000158435 ENSGT00940000178969 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.b.b ENSGT00500000045505.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.b ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00950000183074.A.a.b ENSGT00940000178074 ENSGT00530000063668.A.c ENSGT00940000154920.bb.a Mangrove rivulus MODERN SPECIES 17 mfsd14a2 (ENSKMAG00000021986) insra (ENSKMAG00000021993) arhgef18a (ENSKMAG00000022000) sppl2 (ENSKMAG00000022014) DAPK3 (ENSKMAG00000022041) prkci (ENSKMAG00000022052) ENSKMAG00000022070 ENSKMAG00000022074 nadkb (ENSKMAG00000022077) sec62 (ENSKMAG00000022081) samd7 (ENSKMAG00000022084) apoda.1 (ENSKMAG00000022086) and2 (ENSKMAG00000022089) ENSKMAG00000022093 ENSKMAG00000000142 ENSKMAG00000000293 #22 e2f5 (ENSKMAG00000000314) ACKR4 (ENSKMAG00000000347) ENSKMAG00000000356 ENSKMAG00000000376 ENSKMAG00000000383 ENSKMAG00000000624 ENSKMAG00000000633 mrc1b (ENSKMAG00000000650) ENSKMAG00000000660 ENSKMAG00000000684 mrc1b (ENSKMAG00000000748) cacnb2b (ENSKMAG00000000881) tmem236 (ENSKMAG00000000899) stam (ENSKMAG00000000911) colec12 (ENSKMAG00000000997) Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00940000162952.d.b.b ENSGT00940000162952.c ENSGT00940000153497.E ENSGT00940000158435 ENSGT00940000178969 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00940000181423 ENSGT00440000033408.a.b ENSGT00940000168373 ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b.g ENSGT00940000177582 ENSGT01050000244842.a.a.b.b.b.h.b.b ENSGT01050000244842.a.a.b.b.b.h.b.a ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 Cichlidae ANCESTRAL SPECIES 2 ENSGT00940000157375.d ENSGT00940000158753 ENSGT00940000153424.a.a.d ENSGT00940000162952.d.b.b ENSGT00940000153497.E ENSGT00940000158435 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00500000045505.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00940000181423 ENSGT00440000033408.a.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.b ENSGT01050000244842.a.a.b.b.b.h.b.a ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00950000183074.A.a.b Pseudocrenilabrinae ANCESTRAL SPECIES 7 ENSGT00940000157375.d ENSGT00940000158753 ENSGT00940000153424.a.a.d ENSGT00940000162952.d.b.b ENSGT00940000153497.E ENSGT00940000158435 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00500000045505.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00940000181423 ENSGT00440000033408.a.b ENSGT01090000260052.a.a.a.a.e.a.b ENSGT00950000183126.a.p.b.o.a ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.b ENSGT01050000244842.a.a.b.b.b.h.b.a ENSGT00950000182837.a.a.b ENSGT00390000015525.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 4 ENSGT00940000153424.a.a.d ENSGT00940000162952.c ENSGT00940000161753 ENSGT00940000162952.d.b.b ENSGT00940000153497.E ENSGT00940000158435 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00500000045505.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00940000181423 ENSGT00440000033408.a.b ENSGT01090000260052.a.a.a.a.e.a.b ENSGT00950000183126.a.p.b.o.a ENSGT00950000183126.a.p.b.o.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.b.c ENSGT00940000177582 ENSGT01050000244842.a.a.b.b.b.h.b.b.d Haplochromini ANCESTRAL SPECIES 2 ENSGT00940000153424.a.a.d ENSGT00940000162952.c ENSGT00940000161753 ENSGT00940000162952.d.b.b ENSGT00940000153497.E ENSGT00940000158435 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00500000045505.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT01090000260052.a.a.a.a.e.a.b ENSGT00950000183126.a.p.b.o.a ENSGT00950000183126.a.p.b.o.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.b.c ENSGT01050000244842.a.a.b.b.b.h.b.b.d ENSGT01050000244842.a.a.b.b.b.h.b.a ENSGT00950000182837.a.a.b Haplochromini_A ANCESTRAL SPECIES 3 ENSGT00940000157375.d ENSGT00940000158753 ENSGT00940000153424.a.a.d ENSGT00940000162952.d.b.b ENSGT00940000153497.E ENSGT00940000158435 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00500000045505.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT01090000260052.a.a.a.a.e.a.b ENSGT00950000183126.a.p.b.o.a.a ENSGT00950000183126.a.p.b.o.b ENSGT00940000168373 ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.b.c ENSGT01050000244842.a.a.b.b.b.h.b.b.d ENSGT01050000244842.a.a.b.b.b.h.b.a ENSGT00950000182837.a.a.b P. nyererei MODERN SPECIES 326 sppl2 (ENSPNYG00000008155) ENSPNYG00000008207 ENSPNYG00000008227 prkci (ENSPNYG00000008250) ENSPNYG00000008313 nadkb (ENSPNYG00000008338) sec62 (ENSPNYG00000008388) samd7 (ENSPNYG00000008412) apoda.2 (ENSPNYG00000008484) apoda.2 (ENSPNYG00000008656) apoda.1 (ENSPNYG00000008684) and2 (ENSPNYG00000008728) ENSPNYG00000008746 ENSPNYG00000008772 ENSPNYG00000008809 ENSPNYG00000008896 #22 ENSPNYG00000008915 ACKR4 (ENSPNYG00000008935) ENSPNYG00000008947 ENSPNYG00000008981 ENSPNYG00000008999 Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00940000162952.c ENSGT00940000153497.E ENSGT00940000158435 ENSGT00390000015520 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00980000198875 ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00940000181423 ENSGT00440000033408.a.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT01050000244842.a.a.b.b.b.h.a ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.b ENSGT01050000244842.a.a.b.b.b.h.b.a ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 Eupercaria ANCESTRAL SPECIES 24 ENSGT00940000162952.d.b.b ENSGT00940000153497.E ENSGT00940000158435 ENSGT00390000015520 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00980000198875 ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.b ENSGT01050000244842.a.a.b.b.b.h.b.a ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00950000183074.A.a.b ENSGT00530000063668.A.c Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00940000162952.d.b.b ENSGT00940000153497.E ENSGT00940000158435 ENSGT00390000015520 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00980000198875 ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.b ENSGT01050000244842.a.a.b.b.b.h.b.a ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00950000183074.A.a.b ENSGT00530000063668.A.c Eupecaria_B ANCESTRAL SPECIES 8 ENSGT00940000162952.d.b.b ENSGT00940000153497.E ENSGT00940000158435 ENSGT00390000015520 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00980000198875 ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT00940000163883.J ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.b ENSGT01050000244842.a.a.b.b.b.h.b.a ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00950000183074.A.a.b ENSGT00530000063668.A.c Perciformes ANCESTRAL SPECIES 5 ENSGT00940000162952.d.b.b ENSGT00940000153497.E ENSGT00940000158435 ENSGT00390000015520 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00980000198875 ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.b ENSGT01050000244842.a.a.b.b.b.h.b.a ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00950000183074.A.a.b ENSGT00530000063668.A.c ENSGT00940000154920.bb.a Cottioidei ANCESTRAL SPECIES 22 ENSGT00940000162952.d.b.b ENSGT00940000153497.E ENSGT00940000158435 ENSGT00390000015520 ENSGT00940000165431 ENSGT00390000002757 ENSGT00940000160075 ENSGT00510000046981.a.a.b ENSGT00510000046981.a.a.a ENSGT00510000046981.b.b ENSGT00980000198875 ENSGT00500000045505.a ENSGT00940000156907.p.a.a ENSGT00940000164239.b.a ENSGT00940000157414 ENSGT00940000156252.qb #22 ENSGT00940000157353 ENSGT01030000234667.a.a.a.b.b ENSGT00950000183138.a.a.b.v.b ENSGT00440000033408.a.b ENSGT00940000153311.b.b ENSGT00940000164732.B ENSGT01050000244842.a.a.b.b.b.g ENSGT01050000244842.a.a.b.b.b.h.b.a ENSGT00950000182837.a.a.b ENSGT00390000015525.b ENSGT00940000157171 ENSGT00950000183074.A.a.b ENSGT00530000063668.A.c ENSGT00940000154920.bb.a ENSGT00950000183154.b.a.a.b Lumpfish MODERN SPECIES 8 ENSCLMG00005009498 prkci (ENSCLMG00005006034) ENSCLMG00005006000 ENSCLMG00005005998 nadkb (ENSCLMG00005004665) sec62 (ENSCLMG00005004512) samd7 (ENSCLMG00005004484) ENSCLMG00005004465 apoda.2 (ENSCLMG00005004450) apoda.1 (ENSCLMG00005004440) ENSCLMG00005004432 and2 (ENSCLMG00005004411) ENSCLMG00005004390 ENSCLMG00005004364 ENSCLMG00005020376 ENSCLMG00005020374 #22 ENSCLMG00005020373 ENSCLMG00005020372 ENSCLMG00005020371 ENSCLMG00005020370 ENSCLMG00005020369 ENSCLMG00005020367 ENSCLMG00005020366 mrc1b (ENSCLMG00005020274) mrc1b (ENSCLMG00005020265) cacnb2b (ENSCLMG00005020262) tmem236 (ENSCLMG00005020261) stam (ENSCLMG00005020084) colec12 (ENSCLMG00005020001) clul1 (ENSCLMG00005019994) yes1 (ENSCLMG00005017281) Elephant shark MODERN SPECIES 1633 ENSCMIG00000013223 ENSCMIG00000013226 ENSCMIG00000013228 ENSCMIG00000013230 SLC38A8 (ENSCMIG00000013237) ENSCMIG00000013244 ENSCMIG00000013245 st3gal2 (ENSCMIG00000013251) FCSK (ENSCMIG00000013274) cog4 (ENSCMIG00000013344) sf3b3 (ENSCMIG00000013426) ENSCMIG00000013465 MTSS2 (ENSCMIG00000013468) vac14 (ENSCMIG00000013511) ENSCMIG00000013632 e2f4 (ENSCMIG00000013641) #22 ELMO3 (ENSCMIG00000013751) #23 ENSCMIG00000014066 #24 trim71 (ENSCMIG00000014074) tmem208 (ENSCMIG00000014080) #25 ENSCMIG00000014088 MATCAP1 (ENSCMIG00000014092) #20 ENSCMIG00000014096 ENSCMIG00000014100 ENSCMIG00000014102 exoc3l1 (ENSCMIG00000014112) #21 gstr (ENSCMIG00000014116) ENSCMIG00000014117 ENSCMIG00000014118 ENSCMIG00000014120 ENSCMIG00000014121 Cyclostomata DUPLICATION Cyclostomata ANCESTRAL SPECIES ENSGT00940000156252.a #22 Lamprey MODERN SPECIES 4920 ENSPMAG00000000860 #22 Hagfish MODERN SPECIES 499 snrpb (ENSEBUG00000007467) ENSEBUG00000007580 ENSEBUG00000000919 ENSEBUG00000005764 ENSEBUG00000002772 ENSEBUG00000010569 ENSEBUG00000010285 ENSEBUG00000010204 cpne2 (ENSEBUG00000002951) DNAH5 (ENSEBUG00000008466) ENSEBUG00000012831 gins2 (ENSEBUG00000014602) ENSEBUG00000004250 ENSEBUG00000000443 ENSEBUG00000008581 ENSEBUG00000009575 #22 ENSEBUG00000010930 ENSEBUG00000004529 ENSEBUG00000008204 ENSEBUG00000015195 ENSEBUG00000015340 ENSEBUG00000011120 ENSEBUG00000014251 Cyclostomata ANCESTRAL SPECIES ENSGT00940000156252.b #22 Lamprey MODERN SPECIES 3550 e2f4 (ENSPMAG00000000488) #22