Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Suina	ANCESTRAL SPECIES	2	ENSGT00940000159757 #8	ENSGT00940000160687 #9	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000155200 #13	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35	ENSGT00940000156672 #37
Pig	MODERN SPECIES	14	TERB1 (ENSSSCG00000035639) #7	CA7 (ENSSSCG00000038785) #8	PDP2 (ENSSSCG00000036067) #9	CDH16 (ENSSSCG00000022721) #10	RRAD (ENSSSCG00000036060) #11	CIAO2B (ENSSSCG00000033027) #12	CES3 (ENSSSCG00000024476) #13	CBFB (ENSSSCG00000033811) #14	PHAF1 (ENSSSCG00000040749) #15	B3GNT9 (ENSSSCG00000040139) #16	TRADD (ENSSSCG00000036321) #17	FBXL8 (ENSSSCG00000002793) #18	HSF4 (ENSSSCG00000040125) #19	MATCAP1 (ENSSSCG00000032443) #20	EXOC3L1 (ENSSSCG00000002788) #21	E2F4 (ENSSSCG00000002787) #22	ELMO3 (ENSSSCG00000002786) #23	ENSSSCG00000031199 #24	ENSSSCG00000002790 #25	FHOD1 (ENSSSCG00000026116) #26	SLC9A5 (ENSSSCG00000002783) #27	PLEKHG4 (ENSSSCG00000002782) #28	KCTD19 (ENSSSCG00000002781) #29	LRRC36 (ENSSSCG00000002779) #30	TPPP3 (ENSSSCG00000035983) #31	ZDHHC1 (ENSSSCG00000002778) #32	HSD11B2 (ENSSSCG00000002777) #33	ATP6V0D1 (ENSSSCG00000002776) #34	RIPOR1 (ENSSSCG00000002774) #35	AGRP (ENSSSCG00000002775) #36	CTCF (ENSSSCG00000024253) #37
Chacoan peccary	MODERN SPECIES	106	PDP2 (ENSCWAG00000019805) #9	CDH16 (ENSCWAG00000019851) #10	RRAD (ENSCWAG00000020265) #11	CIAO2B (ENSCWAG00000020272) #12	CES3 (ENSCWAG00000020290) #13	ENSCWAG00000020325	CBFB (ENSCWAG00000020337) #14	PHAF1 (ENSCWAG00000020358) #15	B3GNT9 (ENSCWAG00000020367) #16	TRADD (ENSCWAG00000020373) #17	FBXL8 (ENSCWAG00000020383) #18	HSF4 (ENSCWAG00000020397) #19	NOL3 (ENSCWAG00000020427)	MATCAP1 (ENSCWAG00000020443) #20	EXOC3L1 (ENSCWAG00000020467) #21	E2F4 (ENSCWAG00000020485) #22	ELMO3 (ENSCWAG00000020517) #23	ENSCWAG00000003654 #24	TMEM208 (ENSCWAG00000003685) #25	FHOD1 (ENSCWAG00000003717) #26	SLC9A5 (ENSCWAG00000003762) #27	PLEKHG4 (ENSCWAG00000003836) #28	KCTD19 (ENSCWAG00000003973) #29	LRRC36 (ENSCWAG00000004058) #30	ENSCWAG00000004252	TPPP3 (ENSCWAG00000004283) #31	ZDHHC1 (ENSCWAG00000004315) #32	HSD11B2 (ENSCWAG00000004393) #33	ATP6V0D1 (ENSCWAG00000004436) #34	AGRP (ENSCWAG00000004461) #36	RIPOR1 (ENSCWAG00000004502) #35
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT01030000234613.a.b #21	ENSGT00390000004417.b #20	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Arabian camel	MODERN SPECIES	35	CDH16 (ENSCDRG00005007160) #10	RRAD (ENSCDRG00005007840) #11	CIAO2B (ENSCDRG00005007905) #12	CES2 (ENSCDRG00005007948)	CES3 (ENSCDRG00005008158) #13	CES4A (ENSCDRG00005008394)	CBFB (ENSCDRG00005008908) #14	PHAF1 (ENSCDRG00005009104) #15	B3GNT9 (ENSCDRG00005009199) #16	TRADD (ENSCDRG00005009217) #17	FBXL8 (ENSCDRG00005009311) #18	HSF4 (ENSCDRG00005009366) #19	ENSCDRG00005009628	EXOC3L1 (ENSCDRG00005009698) #21	MATCAP1 (ENSCDRG00005009884) #20	E2F4 (ENSCDRG00005009938) #22	ELMO3 (ENSCDRG00005010079) #23	ENSCDRG00005010406 #24	ENSCDRG00005010459	ENSCDRG00005010491 #25	FHOD1 (ENSCDRG00005010592) #26	ENSCDRG00005010675 #26	SLC9A5 (ENSCDRG00005010730) #27	PLEKHG4 (ENSCDRG00005010841) #28	KCTD19 (ENSCDRG00005011106) #29	LRRC36 (ENSCDRG00005011255) #30	TPPP3 (ENSCDRG00005011501) #31	ZDHHC1 (ENSCDRG00005011521) #32	HSD11B2 (ENSCDRG00005011575) #33	ATP6V0D1 (ENSCDRG00005011601) #34	AGRP (ENSCDRG00005011760) #36
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a.n #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES	7	SUPV3L1 (ENSBMSG00010022325)	HKDC1 (ENSBMSG00010022316)	HK1 (ENSBMSG00010022300)	TACR2 (ENSBMSG00010022290)	TSPAN15 (ENSBMSG00010022282)	NEUROG3 (ENSBMSG00010022279)	FAM241B (ENSBMSG00010022278)	COL13A1 (ENSBMSG00010018272)	MACROH2A2 (ENSBMSG00010017113)	AIFM2 (ENSBMSG00010017088)	TYSND1 (ENSBMSG00010017063)	SAR1A (ENSBMSG00010017041)	ENSBMSG00010017012	NPFFR1 (ENSBMSG00010016996)	LRRC20 (ENSBMSG00010016966)	ENSBMSG00010016948 #22	EIF4EBP2 (ENSBMSG00010016927)	NODAL (ENSBMSG00010016907)	PALD1 (ENSBMSG00010016880)	PRF1 (ENSBMSG00010016858)	ADAMTS14 (ENSBMSG00010016763)	TBATA (ENSBMSG00010016695)	SGPL1 (ENSBMSG00010016639)	UNC5B (ENSBMSG00010016561)	SLC29A3 (ENSBMSG00010016523)	VSIR (ENSBMSG00010016464)	CDH23 (ENSBMSG00010014850)	PSAP (ENSBMSG00010014455)	CHST3 (ENSBMSG00010014411)	ENSBMSG00010014391	SPOCK2 (ENSBMSG00010014327)
Blue whale	MODERN SPECIES	10	ENSBMSG00010015711	PDP2 (ENSBMSG00010015722) #9	CDH16 (ENSBMSG00010015858) #10	RRAD (ENSBMSG00010016627) #11	CIAO2B (ENSBMSG00010016650) #12	CES2 (ENSBMSG00010016703)	CBFB (ENSBMSG00010016805) #14	ENSBMSG00010016852 #15	B3GNT9 (ENSBMSG00010016876) #16	TRADD (ENSBMSG00010016899) #17	FBXL8 (ENSBMSG00010016923) #18	HSF4 (ENSBMSG00010016951) #19	NOL3 (ENSBMSG00010016979)	MATCAP1 (ENSBMSG00010017022) #20	EXOC3L1 (ENSBMSG00010017075) #21	ENSBMSG00010017137 #22	ELMO3 (ENSBMSG00010017180) #23	ENSBMSG00010017277 #24	TMEM208 (ENSBMSG00010017359) #25	FHOD1 (ENSBMSG00010017401) #26	SLC9A5 (ENSBMSG00010017437) #27	KCTD19 (ENSBMSG00010017657) #29	LRRC36 (ENSBMSG00010017738) #30	TPPP3 (ENSBMSG00010017825) #31	ZDHHC1 (ENSBMSG00010017851) #32	HSD11B2 (ENSBMSG00010017905) #33	ATP6V0D1 (ENSBMSG00010017928) #34	AGRP (ENSBMSG00010017977) #36	RIPOR1 (ENSBMSG00010018027) #35	CTCF (ENSBMSG00010018230) #37	CARMIL2 (ENSBMSG00010018294)
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000160687 #9	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793.q	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a.n #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793.q	ENSGT00940000155200 #13	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a.n #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Dolphin	MODERN SPECIES	1310	NAE1 (ENSTTRG00000010124)	CA7 (ENSTTRG00000010154) #8	PDP2 (ENSTTRG00000010159) #9	CDH16 (ENSTTRG00000010162) #10	RRAD (ENSTTRG00000010173) #11	CIAO2B (ENSTTRG00000010181) #12	ENSTTRG00000010185	CBFB (ENSTTRG00000010200) #14	PHAF1 (ENSTTRG00000010207) #15	TRADD (ENSTTRG00000010223) #17	FBXL8 (ENSTTRG00000010233) #18	HSF4 (ENSTTRG00000010241) #19	ENSTTRG00000010251	MATCAP1 (ENSTTRG00000010254) #20	EXOC3L1 (ENSTTRG00000010260) #21	E2F4 (ENSTTRG00000010268) #22	ELMO3 (ENSTTRG00000010275) #23	ENSTTRG00000010287 #24
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793.q	ENSGT00940000155200 #13	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a.n #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793.q	ENSGT00940000155200 #13	ENSGT00940000153314.a.a	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a.n #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Beluga whale	MODERN SPECIES	12	RRAD (ENSDLEG00000002898) #11	FAM96B (ENSDLEG00000002890) #12	CES2 (ENSDLEG00000002869)	ENSDLEG00000002860 #13	ENSDLEG00000002849	ENSDLEG00000002836	PHAF1 (ENSDLEG00000002707) #15	B3GNT9 (ENSDLEG00000002671) #16	TRADD (ENSDLEG00000002663) #17	ENSDLEG00000002626	FBXL8 (ENSDLEG00000002619) #18	HSF4 (ENSDLEG00000002590) #19	NOL3 (ENSDLEG00000002571)	KIAA0895L (ENSDLEG00000002558) #20	EXOC3L1 (ENSDLEG00000002535) #21	E2F4 (ENSDLEG00000002500) #22	ELMO3 (ENSDLEG00000002444) #23	ENSDLEG00000002413 #24	TMEM208 (ENSDLEG00000002382) #25	FHOD1 (ENSDLEG00000001708) #26	SLC9A5 (ENSDLEG00000001295) #27	ENSDLEG00000001253 #28	ENSDLEG00000001229 #28	KCTD19 (ENSDLEG00000001198) #29	LRRC36 (ENSDLEG00000001147) #30	TPPP3 (ENSDLEG00000001125) #31	ZDHHC1 (ENSDLEG00000001103) #32	HSD11B2 (ENSDLEG00000001092) #33	ATP6V0D1 (ENSDLEG00000001081) #34	AGRP (ENSDLEG00000001071) #36	RIPOR1 (ENSDLEG00000000973) #35
Narwhal	DUPLICATION
Narwhal	MODERN SPECIES	311	SUPV3L1 (ENSMMNG00015018179)	HKDC1 (ENSMMNG00015018235)	HK1 (ENSMMNG00015018338)	TACR2 (ENSMMNG00015018482)	TSPAN15 (ENSMMNG00015018513)	NEUROG3 (ENSMMNG00015018559)	FAM241B (ENSMMNG00015018581)	COL13A1 (ENSMMNG00015019392)	MACROH2A2 (ENSMMNG00015021163)	AIFM2 (ENSMMNG00015021184)	TYSND1 (ENSMMNG00015021209)	SAR1A (ENSMMNG00015021225)	PPA1 (ENSMMNG00015021247)	NPFFR1 (ENSMMNG00015021258)	LRRC20 (ENSMMNG00015021275)	ENSMMNG00015021284 #22	EIF4EBP2 (ENSMMNG00015021294)	NODAL (ENSMMNG00015021300)	PALD1 (ENSMMNG00015021314)	PRF1 (ENSMMNG00015021328)	ADAMTS14 (ENSMMNG00015021357)	TBATA (ENSMMNG00015021388)	SGPL1 (ENSMMNG00015021410)	ENSMMNG00015021426	UNC5B (ENSMMNG00015021439)	SLC29A3 (ENSMMNG00015021469)	CDH23 (ENSMMNG00015021504)	C10orf105 (ENSMMNG00015021533)	VSIR (ENSMMNG00015021540)	PSAP (ENSMMNG00015021549)	ENSMMNG00015021560
Narwhal	MODERN SPECIES	296	CDH16 (ENSMMNG00015003293) #10	RRAD (ENSMMNG00015003240) #11	CIAO2B (ENSMMNG00015003223) #12	CES2 (ENSMMNG00015003204)	ENSMMNG00015003177 #13	ENSMMNG00015003160	CBFB (ENSMMNG00015003148) #14	PHAF1 (ENSMMNG00015003125) #15	B3GNT9 (ENSMMNG00015003108) #16	TRADD (ENSMMNG00015003080) #17	FBXL8 (ENSMMNG00015003059) #18	HSF4 (ENSMMNG00015003012) #19	ENSMMNG00015002974	MATCAP1 (ENSMMNG00015002942) #20	EXOC3L1 (ENSMMNG00015002888) #21	ENSMMNG00015002857 #22	ELMO3 (ENSMMNG00015002794) #23	ENSMMNG00015002763 #24	ENSMMNG00015002751	TMEM208 (ENSMMNG00015002742) #25	FHOD1 (ENSMMNG00015002710) #26	SLC9A5 (ENSMMNG00015002666) #27	PLEKHG4 (ENSMMNG00015002609) #28	KCTD19 (ENSMMNG00015002571) #29	LRRC36 (ENSMMNG00015002487) #30	TPPP3 (ENSMMNG00015002443) #31	ZDHHC1 (ENSMMNG00015002416) #32	HSD11B2 (ENSMMNG00015002384) #33	ATP6V0D1 (ENSMMNG00015002352) #34	AGRP (ENSMMNG00015002325) #36	RIPOR1 (ENSMMNG00015002214) #35
Vaquita	DUPLICATION
Vaquita	MODERN SPECIES	7	SUPV3L1 (ENSPSNG00000019123)	HKDC1 (ENSPSNG00000019172)	HK1 (ENSPSNG00000019292)	TACR2 (ENSPSNG00000019582)	TSPAN15 (ENSPSNG00000019618)	NEUROG3 (ENSPSNG00000019648)	FAM241B (ENSPSNG00000019661)	COL13A1 (ENSPSNG00000019849)	MACROH2A2 (ENSPSNG00000020131)	AIFM2 (ENSPSNG00000020177)	TYSND1 (ENSPSNG00000020220)	SAR1A (ENSPSNG00000020248)	PPA1 (ENSPSNG00000020295)	NPFFR1 (ENSPSNG00000020327)	LRRC20 (ENSPSNG00000020377)	ENSPSNG00000020439 #22	ENSPSNG00000020464	NODAL (ENSPSNG00000020491)	PALD1 (ENSPSNG00000020534)	PRF1 (ENSPSNG00000020654)	ADAMTS14 (ENSPSNG00000020694)	TBATA (ENSPSNG00000020841)	SGPL1 (ENSPSNG00000020906)	ENSPSNG00000020953	UNC5B (ENSPSNG00000021006)	SLC29A3 (ENSPSNG00000021104)	CDH23 (ENSPSNG00000009904)	C10orf105 (ENSPSNG00000011646)	VSIR (ENSPSNG00000011665)	PSAP (ENSPSNG00000011730)	ENSPSNG00000011842
Vaquita	MODERN SPECIES	10	NAE1 (ENSPSNG00000016216)	CA7 (ENSPSNG00000016396) #8	PDP2 (ENSPSNG00000016552) #9	CDH16 (ENSPSNG00000016664) #10	RRAD (ENSPSNG00000017497) #11	CIAO2B (ENSPSNG00000017545) #12	CES2 (ENSPSNG00000017596)	CBFB (ENSPSNG00000017662) #14	PHAF1 (ENSPSNG00000017735) #15	B3GNT9 (ENSPSNG00000017784) #16	FBXL8 (ENSPSNG00000017855) #18	HSF4 (ENSPSNG00000017904) #19	ENSPSNG00000017959	MATCAP1 (ENSPSNG00000018018) #20	EXOC3L1 (ENSPSNG00000018065) #21	ENSPSNG00000018189 #22	ELMO3 (ENSPSNG00000018256) #23	ENSPSNG00000018855 #24	ENSPSNG00000018895	TMEM208 (ENSPSNG00000018943) #25	FHOD1 (ENSPSNG00000019017) #26	SLC9A5 (ENSPSNG00000019084) #27	PLEKHG4 (ENSPSNG00000019161) #28	KCTD19 (ENSPSNG00000019323) #29	LRRC36 (ENSPSNG00000019384) #30	ENSPSNG00000019623 #31	ZDHHC1 (ENSPSNG00000019669) #32	HSD11B2 (ENSPSNG00000019771) #33	ATP6V0D1 (ENSPSNG00000019804) #34	AGRP (ENSPSNG00000019863) #36	RIPOR1 (ENSPSNG00000019920) #35
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	12	VPS26A (ENSPCTG00005006530)	SUPV3L1 (ENSPCTG00005006597)	HKDC1 (ENSPCTG00005006659)	TACR2 (ENSPCTG00005006726)	ENSPCTG00005006757	NEUROG3 (ENSPCTG00005006773)	FAM241B (ENSPCTG00005006794)	COL13A1 (ENSPCTG00005007462)	MACROH2A2 (ENSPCTG00005014364)	AIFM2 (ENSPCTG00005014407)	TYSND1 (ENSPCTG00005014466)	SAR1A (ENSPCTG00005014528)	PPA1 (ENSPCTG00005014580)	ENSPCTG00005014625	ENSPCTG00005014776	ENSPCTG00005014824 #22	EIF4EBP2 (ENSPCTG00005014870)	NODAL (ENSPCTG00005014924)	PALD1 (ENSPCTG00005014988)	PRF1 (ENSPCTG00005015153)	ADAMTS14 (ENSPCTG00005015211)	SGPL1 (ENSPCTG00005015728)	PCBD1 (ENSPCTG00005015772)	SLC29A3 (ENSPCTG00005015832)	ENSPCTG00005016034	C20H10orf105 (ENSPCTG00005016335)	VSIR (ENSPCTG00005016352)	CHST3 (ENSPCTG00005016377)	ENSPCTG00005016423	ASCC1 (ENSPCTG00005016464)	ANAPC16 (ENSPCTG00005016583)
Sperm whale	MODERN SPECIES	922										TRADD (ENSPCTG00005015903) #17	FBXL8 (ENSPCTG00005015852) #18	HSF4 (ENSPCTG00005015491) #19	ENSPCTG00005015399	KIAA0895L (ENSPCTG00005015241) #20	EXOC3L1 (ENSPCTG00005015029) #21	E2F4 (ENSPCTG00005014982) #22	ELMO3 (ENSPCTG00005014302) #23	ENSPCTG00005014220 #24	ENSPCTG00005014178	TMEM208 (ENSPCTG00005014062) #25	FHOD1 (ENSPCTG00005013971) #26
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Yarkand deer	MODERN SPECIES	27	PDP2 (ENSCHYG00000022241) #9	CDH16 (ENSCHYG00000022298) #10	RRAD (ENSCHYG00000022736) #11	ENSCHYG00000022775 #12	CES2 (ENSCHYG00000022832)	CES3 (ENSCHYG00000022898) #13	CES4A (ENSCHYG00000023100)	CBFB (ENSCHYG00000023398) #14	PHAF1 (ENSCHYG00000023443) #15	B3GNT9 (ENSCHYG00000023536) #16	TRADD (ENSCHYG00000023549) #17	ENSCHYG00000023612 #19	NOL3 (ENSCHYG00000023759)	MATCAP1 (ENSCHYG00000023823) #20	EXOC3L1 (ENSCHYG00000023914) #21	E2F4 (ENSCHYG00000023962) #22	ELMO3 (ENSCHYG00000024035) #23	ENSCHYG00000024305 #24	TMEM208 (ENSCHYG00000024345) #25	FHOD1 (ENSCHYG00000024493) #26	SLC9A5 (ENSCHYG00000024982) #27	ENSCHYG00000008855 #28	KCTD19 (ENSCHYG00000009258) #29	LRRC36 (ENSCHYG00000009424) #30	ENSCHYG00000009661	TPPP3 (ENSCHYG00000009692) #31	ZDHHC1 (ENSCHYG00000009775) #32	HSD11B2 (ENSCHYG00000009995) #33	ATP6V0D1 (ENSCHYG00000010102) #34	AGRP (ENSCHYG00000010393) #36	RIPOR1 (ENSCHYG00000010451) #35
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Siberian musk deer	MODERN SPECIES	125	CDH16 (ENSMMSG00000003008) #10	RRAD (ENSMMSG00000002919) #11	CIAO2B (ENSMMSG00000002906) #12	CES2 (ENSMMSG00000002881)	CES3 (ENSMMSG00000002817) #13	CES4A (ENSMMSG00000002458)	CBFB (ENSMMSG00000002381) #14	PHAF1 (ENSMMSG00000002333) #15	B3GNT9 (ENSMMSG00000002307) #16	TRADD (ENSMMSG00000002296) #17	FBXL8 (ENSMMSG00000002277) #18	HSF4 (ENSMMSG00000002260) #19	NOL3 (ENSMMSG00000002238)	MATCAP1 (ENSMMSG00000002222) #20	EXOC3L1 (ENSMMSG00000002185) #21	E2F4 (ENSMMSG00000002147) #22	ELMO3 (ENSMMSG00000002100) #23	ENSMMSG00000002071 #24	ENSMMSG00000002065	TMEM208 (ENSMMSG00000002038) #25	FHOD1 (ENSMMSG00000002016) #26	SLC9A5 (ENSMMSG00000001982) #27	PLEKHG4 (ENSMMSG00000001910) #28	KCTD19 (ENSMMSG00000001864) #29	LRRC36 (ENSMMSG00000001751) #30	TPPP3 (ENSMMSG00000001723) #31	ZDHHC1 (ENSMMSG00000001705) #32	HSD11B2 (ENSMMSG00000001687) #33	ATP6V0D1 (ENSMMSG00000001667) #34	AGRP (ENSMMSG00000001658) #36	RIPOR1 (ENSMMSG00000001629) #35
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Bos	ANCESTRAL SPECIES	4	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637.p #24	ENSGT00900000143253	ENSGT00940000160637.o #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36
Bos_a	ANCESTRAL SPECIES	22	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637.p #24	ENSGT00900000143253	ENSGT00940000160637.o #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29
Domestic yak	MODERN SPECIES	12	CDH16 (ENSBGRG00000026897) #10	RRAD (ENSBGRG00000026896) #11	ENSBGRG00000026895 #12	CES2 (ENSBGRG00000026894)	CES3 (ENSBGRG00000026893) #13	CES4A (ENSBGRG00000026891)	CBFB (ENSBGRG00000026888) #14	PHAF1 (ENSBGRG00000026886) #15	B3GNT9 (ENSBGRG00000026884) #16	TRADD (ENSBGRG00000026883) #17	FBXL8 (ENSBGRG00000026881) #18	HSF4 (ENSBGRG00000026879) #19	NOL3 (ENSBGRG00000026877)	MATCAP1 (ENSBGRG00000026876) #20	EXOC3L1 (ENSBGRG00000026874) #21	E2F4 (ENSBGRG00000026873) #22	ELMO3 (ENSBGRG00000026869) #23	ENSBGRG00000026868 #24	ENSBGRG00000026867 #24	TMEM208 (ENSBGRG00000026865) #25	ENSBGRG00000026861 #26	SLC9A5 (ENSBGRG00000026860) #27	PLEKHG4 (ENSBGRG00000026856) #28	KCTD19 (ENSBGRG00000026853) #29	ENSBGRG00000026851	LRRC36 (ENSBGRG00000026835) #30	TPPP3 (ENSBGRG00000026802) #31	ZDHHC1 (ENSBGRG00000026787) #32	HSD11B2 (ENSBGRG00000026764) #33	ATP6V0D1 (ENSBGRG00000026746) #34	AGRP (ENSBGRG00000026735) #36
Wild yak	MODERN SPECIES	818	CDH16 (ENSBMUG00000004891) #10	RRAD (ENSBMUG00000004672) #11	ENSBMUG00000004656 #12	CES2 (ENSBMUG00000004631)	CES3 (ENSBMUG00000004603) #13	CES4A (ENSBMUG00000004549)	ENSBMUG00000004501 #14	PHAF1 (ENSBMUG00000004491) #15	B3GNT9 (ENSBMUG00000004470) #16	TRADD (ENSBMUG00000004465) #17	FBXL8 (ENSBMUG00000004457) #18	HSF4 (ENSBMUG00000004436) #19	ENSBMUG00000004421	MATCAP1 (ENSBMUG00000004402) #20	EXOC3L1 (ENSBMUG00000004386) #21	E2F4 (ENSBMUG00000004337) #22	ELMO3 (ENSBMUG00000004292) #23	ENSBMUG00000004260 #24	ENSBMUG00000004246	TMEM208 (ENSBMUG00000004238) #25	FHOD1 (ENSBMUG00000004193) #26	ENSBMUG00000004095 #26	SLC9A5 (ENSBMUG00000004079) #27	PLEKHG4 (ENSBMUG00000004054) #28	KCTD19 (ENSBMUG00000003932) #29	ENSBMUG00000003916	LRRC36 (ENSBMUG00000003891) #30	TPPP3 (ENSBMUG00000003823) #31	ZDHHC1 (ENSBMUG00000003794) #32	HSD11B2 (ENSBMUG00000003730) #33	ATP6V0D1 (ENSBMUG00000003696) #34
Bos_b	ANCESTRAL SPECIES		ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637.p #24	ENSGT00940000160637.o #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00940000156218.b	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36
Cow	MODERN SPECIES	9	CDH16 (ENSBTAG00000009585) #10	RRAD (ENSBTAG00000013929) #11	CIAO2B (ENSBTAG00000013931) #12	CES2 (ENSBTAG00000005093)	CES3 (ENSBTAG00000040413) #13	CES4A (ENSBTAG00000038325)	CBFB (ENSBTAG00000016103) #14	PHAF1 (ENSBTAG00000005058) #15	B3GNT9 (ENSBTAG00000049665) #16	TRADD (ENSBTAG00000012642) #17	FBXL8 (ENSBTAG00000023632) #18	HSF4 (ENSBTAG00000003514) #19	NOL3 (ENSBTAG00000003519)	MATCAP1 (ENSBTAG00000003521) #20	EXOC3L1 (ENSBTAG00000012035) #21	E2F4 (ENSBTAG00000012063) #22	ELMO3 (ENSBTAG00000001286) #23	ENSBTAG00000001287 #24	TMEM208 (ENSBTAG00000002327) #25	FHOD1 (ENSBTAG00000032427) #26	SLC9A5 (ENSBTAG00000039190) #27	PLEKHG4 (ENSBTAG00000021570) #28	KCTD19 (ENSBTAG00000032396) #29	LRRC36 (ENSBTAG00000001838) #30	ENSBTAG00000046690	TPPP3 (ENSBTAG00000019822) #31	ZDHHC1 (ENSBTAG00000038134) #32	HSD11B2 (ENSBTAG00000005685) #33	ATP6V0D1 (ENSBTAG00000014553) #34	AGRP (ENSBTAG00000014556) #36	RIPOR1 (ENSBTAG00000008860) #35
Hybrid Bos Indicus	MODERN SPECIES	9	CDH16 (ENSBIXG00005020523) #10	RRAD (ENSBIXG00005020587) #11	CIAO2B (ENSBIXG00005003480) #12	CES2 (ENSBIXG00005020621)	CES3 (ENSBIXG00005003507) #13	CES4A (ENSBIXG00005020830)	CBFB (ENSBIXG00005003530) #14	PHAF1 (ENSBIXG00005020907) #15	B3GNT9 (ENSBIXG00005005675) #16	TRADD (ENSBIXG00005020967) #17	FBXL8 (ENSBIXG00005020996) #18	HSF4 (ENSBIXG00005021067) #19	ENSBIXG00005021092	MATCAP1 (ENSBIXG00005021118) #20	EXOC3L1 (ENSBIXG00005005746) #21	E2F4 (ENSBIXG00005021168) #22	ELMO3 (ENSBIXG00005021218) #23	ENSBIXG00005021263 #24	TMEM208 (ENSBIXG00005021309) #25	FHOD1 (ENSBIXG00005003605) #26	SLC9A5 (ENSBIXG00005021398) #27	PLEKHG4 (ENSBIXG00005021557) #28	KCTD19 (ENSBIXG00005021614) #29	ENSBIXG00005003649	LRRC36 (ENSBIXG00005021780) #30	TPPP3 (ENSBIXG00005021813) #31	ZDHHC1 (ENSBIXG00005021870) #32	HSD11B2 (ENSBIXG00005021881) #33	ATP6V0D1 (ENSBIXG00005003697) #34	AGRP (ENSBIXG00005021957) #36	RIPOR1 (ENSBIXG00005022104) #35
American bison	DUPLICATION
American bison	MODERN SPECIES	3150	COL14A1 (ENSBBBG00000014949)	DEPTOR (ENSBBBG00000000969)	DSCC1 (ENSBBBG00000000990)	TAF2 (ENSBBBG00000001006)	ENPP2 (ENSBBBG00000001054)	ENSBBBG00000001221	SLC10A5 (ENSBBBG00000001243)	ZFAND1 (ENSBBBG00000003681)	CHMP4C (ENSBBBG00000014880)	SNX16 (ENSBBBG00000014866)	ENSBBBG00000003657	RALYL (ENSBBBG00000002824)	ENSBBBG00000014729	ENSBBBG00000014705	LRRCC1 (ENSBBBG00000014695)	ENSBBBG00000014664 #22	ENSBBBG00000014657	ENSBBBG00000014641	CA13 (ENSBBBG00000014615)	ENSBBBG00000014608	ENSBBBG00000014601	ENSBBBG00000014595	ENSBBBG00000009132	CA3 (ENSBBBG00000009126)	CA2 (ENSBBBG00000003416)	ENSBBBG00000003411	ATP6V0D2 (ENSBBBG00000014549) ##34	ENSBBBG00000014538	WWP1 (ENSBBBG00000003399)	RMDN1 (ENSBBBG00000003379)
American bison	MODERN SPECIES	3211	RRAD (ENSBBBG00000014738) #11	CIAO2B (ENSBBBG00000014743) #12	CES2 (ENSBBBG00000014778)	ENSBBBG00000014790 #13	ENSBBBG00000014799 #13	CES4A (ENSBBBG00000007359)	ENSBBBG00000003663 #14	PHAF1 (ENSBBBG00000014888) #15	B3GNT9 (ENSBBBG00000003675) #16	TRADD (ENSBBBG00000007361) #17	FBXL8 (ENSBBBG00000014921) #18	HSF4 (ENSBBBG00000001199) #19	NOL3 (ENSBBBG00000001188)	MATCAP1 (ENSBBBG00000001162) #20	EXOC3L1 (ENSBBBG00000001140) #21	E2F4 (ENSBBBG00000001117) #22	ELMO3 (ENSBBBG00000000997) #23	ENSBBBG00000000951 #24	ENSBBBG00000000949	TMEM208 (ENSBBBG00000000934) #25	ENSBBBG00000000858 #26	ENSBBBG00000000848 #26	SLC9A5 (ENSBBBG00000000822) #27	PLEKHG4 (ENSBBBG00000014974) #28	KCTD19 (ENSBBBG00000014992) #29	ENSBBBG00000014995	LRRC36 (ENSBBBG00000003737) #30	TPPP3 (ENSBBBG00000015070) #31	ZDHHC1 (ENSBBBG00000015085) #32	HSD11B2 (ENSBBBG00000003742) #33	ATP6V0D1 (ENSBBBG00000015106) #34
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35	ENSGT00940000156672 #37
Goat	MODERN SPECIES	9	CDH16 (ENSCHIG00000023982) #10	RRAD (ENSCHIG00000014464) #11	CIAO2B (ENSCHIG00000013136) #12	CES2 (ENSCHIG00000019303)	CES3 (ENSCHIG00000024208) #13	CES4A (ENSCHIG00000016586)	CBFB (ENSCHIG00000020674) #14	PHAF1 (ENSCHIG00000020303) #15	B3GNT9 (ENSCHIG00000014321) #16	TRADD (ENSCHIG00000024921) #17	FBXL8 (ENSCHIG00000015480) #18	HSF4 (ENSCHIG00000003853) #19	ENSCHIG00000017201	MATCAP1 (ENSCHIG00000015211) #20	EXOC3L1 (ENSCHIG00000024506) #21	E2F4 (ENSCHIG00000016663) #22	ELMO3 (ENSCHIG00000026708) #23	ENSCHIG00000019793 #24	TMEM208 (ENSCHIG00000025511) #25	FHOD1 (ENSCHIG00000025985) #26	SLC9A5 (ENSCHIG00000010558) #27	PLEKHG4 (ENSCHIG00000014998) #28	KCTD19 (ENSCHIG00000018050) #29	LRRC36 (ENSCHIG00000011267) #30	TPPP3 (ENSCHIG00000021248) #31	ZDHHC1 (ENSCHIG00000009629) #32	HSD11B2 (ENSCHIG00000004358) #33	ATP6V0D1 (ENSCHIG00000017558) #34	AGRP (ENSCHIG00000025951) #36	RIPOR1 (ENSCHIG00000008773) #35	CTCF (ENSCHIG00000013690) #37
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	19	THAP2 (ENSOARG00020002399)	TMEM19 (ENSOARG00020002407)	RAB21 (ENSOARG00020002440)	TBC1D15 (ENSOARG00020002469)	TPH2 (ENSOARG00020002610)	ENSOARG00020002632	TRHDE (ENSOARG00020002645)	ENSOARG00020002666	NSMCE1 (ENSOARG00020002686)	KDM8 (ENSOARG00020002713)	ENSOARG00020002731	ATXN7L3B (ENSOARG00020002735)	KCNC2 (ENSOARG00020002747)	CAPS2 (ENSOARG00020002788)	GLIPR1L1 (ENSOARG00020002811)	ENSOARG00020002828 #22	GLIPR1 (ENSOARG00020002870)	KRR1 (ENSOARG00020002893)	PHLDA1 (ENSOARG00020002913)	ENSOARG00020002933	OSBPL8 (ENSOARG00020003030)	BBS10 (ENSOARG00020003354)	ENSOARG00020003381	ZDHHC17 (ENSOARG00020003403)	CSRP2 (ENSOARG00020003468)	E2F7 (ENSOARG00020003529)	NAV3 (ENSOARG00020003813)	SYT1 (ENSOARG00020005626)	PAWR (ENSOARG00020005665)	PPP1R12A (ENSOARG00020005817)	PTPRQ (ENSOARG00020008080)
Rambouillet Sheep	MODERN SPECIES	5	CDH16 (ENSOARG00020017267) #10	RRAD (ENSOARG00020017701) #11	CIAO2B (ENSOARG00020017741) #12	CES2 (ENSOARG00020017788)	CES3 (ENSOARG00020017918) #13	CES4A (ENSOARG00020018190)	CBFB (ENSOARG00020018510) #14	PHAF1 (ENSOARG00020018589) #15	B3GNT9 (ENSOARG00020018774) #16	TRADD (ENSOARG00020018788) #17	FBXL8 (ENSOARG00020018825) #18	HSF4 (ENSOARG00020018866) #19	ENSOARG00020018928	MATCAP1 (ENSOARG00020018962) #20	EXOC3L1 (ENSOARG00020019062) #21	ENSOARG00020019148 #22	ELMO3 (ENSOARG00020019220) #23	ENSOARG00020019801 #24	TMEM208 (ENSOARG00020019829) #25	SLC9A5 (ENSOARG00020020928) #27	PLEKHG4 (ENSOARG00020021085) #28	KCTD19 (ENSOARG00020021493) #29	LRRC36 (ENSOARG00020021598) #30	TPPP3 (ENSOARG00020021942) #31	ZDHHC1 (ENSOARG00020021964) #32	HSD11B2 (ENSOARG00020022068) #33	ATP6V0D1 (ENSOARG00020022126) #34	AGRP (ENSOARG00020022169) #36	RIPOR1 (ENSOARG00020022218) #35	CTCF (ENSOARG00020022476) #37	CARMIL2 (ENSOARG00020022572)
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00900000143253	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35
leopard	MODERN SPECIES	28	CA7 (ENSPPRG00000005536) #8	PDP2 (ENSPPRG00000016536) #9	CDH16 (ENSPPRG00000009161) #10	RRAD (ENSPPRG00000009391) #11	CIAO2B (ENSPPRG00000009809) #12	CES2 (ENSPPRG00000009977)	CES3 (ENSPPRG00000010944) #13	CES4A (ENSPPRG00000012641)	CBFB (ENSPPRG00000013240) #14	PHAF1 (ENSPPRG00000013795) #15	TRADD (ENSPPRG00000014449) #17	FBXL8 (ENSPPRG00000016650) #18	HSF4 (ENSPPRG00000019220) #19	ENSPPRG00000020293	MATCAP1 (ENSPPRG00000021263) #20	E2F4 (ENSPPRG00000024105) #22	ELMO3 (ENSPPRG00000023242) #23	ENSPPRG00000022970 #24	ENSPPRG00000022903	TMEM208 (ENSPPRG00000000065) #25	SLC9A5 (ENSPPRG00000001927) #27	PLEKHG4 (ENSPPRG00000004387) #28	KCTD19 (ENSPPRG00000005410) #29	LRRC36 (ENSPPRG00000007845) #30	TPPP3 (ENSPPRG00000008182) #31	ZDHHC1 (ENSPPRG00000008488) #32	HSD11B2 (ENSPPRG00000008932) #33	ATP6V0D1 (ENSPPRG00000009684) #34	AGRP (ENSPPRG00000009953) #36	RIPOR1 (ENSPPRG00000013506) #35	CTCF (ENSPPRG00000014317) #37
lion	MODERN SPECIES	15	CDH16 (ENSPLOG00000012664) #10	RRAD (ENSPLOG00000013148) #11	CIAO2B (ENSPLOG00000013197) #12	ENSPLOG00000013241	CES3 (ENSPLOG00000013294) #13	CES4A (ENSPLOG00000013533)	ENSPLOG00000013982 #14	PHAF1 (ENSPLOG00000014041) #15	B3GNT9 (ENSPLOG00000014082) #16	TRADD (ENSPLOG00000014099) #17	FBXL8 (ENSPLOG00000014173) #18	HSF4 (ENSPLOG00000014216) #19	ENSPLOG00000014452	MATCAP1 (ENSPLOG00000014489) #20	EXOC3L1 (ENSPLOG00000014607) #21	E2F4 (ENSPLOG00000014749) #22	ELMO3 (ENSPLOG00000014820) #23	ENSPLOG00000015357 #24	TMEM208 (ENSPLOG00000015468) #25	FHOD1 (ENSPLOG00000015635) #26	SLC9A5 (ENSPLOG00000015829) #27	PLEKHG4 (ENSPLOG00000016002) #28	KCTD19 (ENSPLOG00000016337) #29	LRRC36 (ENSPLOG00000016474) #30	TPPP3 (ENSPLOG00000016652) #31	ZDHHC1 (ENSPLOG00000016693) #32	HSD11B2 (ENSPLOG00000016794) #33	ATP6V0D1 (ENSPLOG00000016862) #34	AGRP (ENSPLOG00000016913) #36	RIPOR1 (ENSPLOG00000017003) #35	CTCF (ENSPLOG00000017439) #37
Tiger	MODERN SPECIES	320	CA7 (ENSPTIG00000019280) #8	PDP2 (ENSPTIG00000006204) #9	CDH16 (ENSPTIG00000019612) #10	RRAD (ENSPTIG00000001809) #11	CIAO2B (ENSPTIG00000003290) #12	CES2 (ENSPTIG00000004063)	CES3 (ENSPTIG00000004489) #13	CES4A (ENSPTIG00000005543)	ENSPTIG00000006285 #14	PHAF1 (ENSPTIG00000006322) #15	TRADD (ENSPTIG00000007077) #17	FBXL8 (ENSPTIG00000007308) #18	HSF4 (ENSPTIG00000007435) #19	ENSPTIG00000008436	MATCAP1 (ENSPTIG00000008588) #20	E2F4 (ENSPTIG00000009532) #22	ELMO3 (ENSPTIG00000009736) #23	ENSPTIG00000010332 #24	TMEM208 (ENSPTIG00000010543) #25	SLC9A5 (ENSPTIG00000011105) #27	PLEKHG4 (ENSPTIG00000011316) #28	KCTD19 (ENSPTIG00000011820) #29	LRRC36 (ENSPTIG00000011930) #30	TPPP3 (ENSPTIG00000012322) #31	ZDHHC1 (ENSPTIG00000012632) #32	HSD11B2 (ENSPTIG00000013334) #33	ATP6V0D1 (ENSPTIG00000013473) #34	AGRP (ENSPTIG00000013563) #36	CTCF (ENSPTIG00000015459) #37	CARMIL2 (ENSPTIG00000016035)	ACD (ENSPTIG00000017755)
Cat	MODERN SPECIES	246	CDH16 (ENSFCAG00000012774) #10	RRAD (ENSFCAG00000026895) #11	CIAO2B (ENSFCAG00000029216) #12	CES2 (ENSFCAG00000003806)	ENSFCAG00000001200 #13	CES4A (ENSFCAG00000003809)	CBFB (ENSFCAG00000045823) #14	CE2H16orf70 (ENSFCAG00000009260) #15	B3GNT9 (ENSFCAG00000046265) #16	TRADD (ENSFCAG00000043839) #17	FBXL8 (ENSFCAG00000009263) #18	HSF4 (ENSFCAG00000014099) #19	NOL3 (ENSFCAG00000009264)	MATCAP1 (ENSFCAG00000009265) #20	EXOC3L1 (ENSFCAG00000009267) #21	E2F4 (ENSFCAG00000009268) #22	ELMO3 (ENSFCAG00000009269) #23	ENSFCAG00000031746 #24	TMEM208 (ENSFCAG00000024313) #25	FHOD1 (ENSFCAG00000009272) #26	SLC9A5 (ENSFCAG00000028820) #27	PLEKHG4 (ENSFCAG00000009274) #28	KCTD19 (ENSFCAG00000009275) #29	LRRC36 (ENSFCAG00000009276) #30	TPPP3 (ENSFCAG00000009277) #31	ZDHHC1 (ENSFCAG00000018593) #32	HSD11B2 (ENSFCAG00000027537) #33	ATP6V0D1 (ENSFCAG00000003433) #34	AGRP (ENSFCAG00000037497) #36	RIPOR1 (ENSFCAG00000009278) #35	CTCF (ENSFCAG00000003492) #37
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35	ENSGT00940000156672 #37
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35	ENSGT00940000156672 #37
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35	ENSGT00940000156672 #37
Ursus	ANCESTRAL SPECIES	41	ENSGT00940000160687 #9	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00990000205363	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35	ENSGT00940000156672 #37
American black bear	MODERN SPECIES	25						ENSUAMG00000015699 #14	PHAF1 (ENSUAMG00000015701) #15	B3GNT9 (ENSUAMG00000015703) #16	TRADD (ENSUAMG00000015704) #17	ENSUAMG00000015706	FBXL8 (ENSUAMG00000015707) #18	HSF4 (ENSUAMG00000015720) #19	MATCAP1 (ENSUAMG00000015885) #20	ENSUAMG00000015886	EXOC3L1 (ENSUAMG00000015887) #21	E2F4 (ENSUAMG00000015888) #22	ELMO3 (ENSUAMG00000015889) #23	ENSUAMG00000015890 #24	TMEM208 (ENSUAMG00000015892) #25	ENSUAMG00000015894 #26	SLC9A5 (ENSUAMG00000015895) #27	ENSUAMG00000015897 #28	ENSUAMG00000015899 #28	KCTD19 (ENSUAMG00000015905) #29	LRRC36 (ENSUAMG00000015910) #30	TPPP3 (ENSUAMG00000015912) #31	ZDHHC1 (ENSUAMG00000015914) #32	ENSUAMG00000015917 #33	ENSUAMG00000015918 #33	ATP6V0D1 (ENSUAMG00000015919) #34	AGRP (ENSUAMG00000015920) #36
Polar bear	MODERN SPECIES	245	NAE1 (ENSUMAG00000020485)	CA7 (ENSUMAG00000020388) #8	PDP2 (ENSUMAG00000020386) #9	CDH16 (ENSUMAG00000020327) #10	RRAD (ENSUMAG00000020298) #11	CIAO2B (ENSUMAG00000020292) #12	CES2 (ENSUMAG00000020281)	ENSUMAG00000020276 #13	ENSUMAG00000020272 #14	PHAF1 (ENSUMAG00000020258) #15	B3GNT9 (ENSUMAG00000020254) #16	TRADD (ENSUMAG00000020250) #17	HSF4 (ENSUMAG00000020034) #19	MATCAP1 (ENSUMAG00000020005) #20	EXOC3L1 (ENSUMAG00000019991) #21	E2F4 (ENSUMAG00000019980) #22	ELMO3 (ENSUMAG00000019904) #23	ENSUMAG00000019889 #24	TMEM208 (ENSUMAG00000019884) #25	SLC9A5 (ENSUMAG00000019821) #27	ENSUMAG00000019816 #28	ENSUMAG00000019806 #28	KCTD19 (ENSUMAG00000019780) #29	LRRC36 (ENSUMAG00000019753) #30	TPPP3 (ENSUMAG00000019745) #31	ZDHHC1 (ENSUMAG00000019731) #32	HSD11B2 (ENSUMAG00000019726) #33	ATP6V0D1 (ENSUMAG00000019723) #34	AGRP (ENSUMAG00000019719) #36	RIPOR1 (ENSUMAG00000019710) #35	CTCF (ENSUMAG00000019706) #37
Giant Panda	MODERN SPECIES	3	PDP2 (ENSAMEG00000019711) #9	CDH16 (ENSAMEG00000017136) #10	RRAD (ENSAMEG00000024334) #11	CIAO2B (ENSAMEG00000025163) #12	CES2 (ENSAMEG00000017174)	CES3 (ENSAMEG00000017207) #13	CBFB (ENSAMEG00000031354) #14	PHAF1 (ENSAMEG00000017219) #15	B3GNT9 (ENSAMEG00000026064) #16	TRADD (ENSAMEG00000017232) #17	FBXL8 (ENSAMEG00000017236) #18	HSF4 (ENSAMEG00000017238) #19	ENSAMEG00000017263	MATCAP1 (ENSAMEG00000017266) #20	EXOC3L1 (ENSAMEG00000017273) #21	E2F4 (ENSAMEG00000017275) #22	ELMO3 (ENSAMEG00000017281) #23	ENSAMEG00000017316 #24	TMEM208 (ENSAMEG00000017322) #25	SLC9A5 (ENSAMEG00000017339) #27	PLEKHG4 (ENSAMEG00000017357) #28	KCTD19 (ENSAMEG00000017368) #29	LRRC36 (ENSAMEG00000017372) #30	ZDHHC1 (ENSAMEG00000017379) #32	HSD11B2 (ENSAMEG00000017389) #33	ATP6V0D1 (ENSAMEG00000017393) #34	AGRP (ENSAMEG00000017404) #36	RIPOR1 (ENSAMEG00000017405) #35	CTCF (ENSAMEG00000017438) #37	CARMIL2 (ENSAMEG00000017460)	ACD (ENSAMEG00000017492)
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00940000160687 #9	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35	ENSGT00940000156672 #37
American mink	MODERN SPECIES	2	PDP2 (ENSNVIG00000010937) #9	CDH16 (ENSNVIG00000010820) #10	RRAD (ENSNVIG00000010800) #11	CIAO2B (ENSNVIG00000010786) #12	CES2 (ENSNVIG00000010773)	CES3 (ENSNVIG00000010721) #13	CBFB (ENSNVIG00000010680) #14	PHAF1 (ENSNVIG00000010652) #15	B3GNT9 (ENSNVIG00000010650) #16	TRADD (ENSNVIG00000010625) #17	FBXL8 (ENSNVIG00000010608) #18	HSF4 (ENSNVIG00000010576) #19	ENSNVIG00000010569	MATCAP1 (ENSNVIG00000010557) #20	EXOC3L1 (ENSNVIG00000010533) #21	E2F4 (ENSNVIG00000010516) #22	ELMO3 (ENSNVIG00000010475) #23	ENSNVIG00000010464 #24	TMEM208 (ENSNVIG00000010434) #25	FHOD1 (ENSNVIG00000010420) #26	ENSNVIG00000010413 #26	SLC9A5 (ENSNVIG00000010397) #27	PLEKHG4 (ENSNVIG00000010234) #28	KCTD19 (ENSNVIG00000010210) #29	LRRC36 (ENSNVIG00000010163) #30	TPPP3 (ENSNVIG00000010145) #31	ZDHHC1 (ENSNVIG00000010126) #32	HSD11B2 (ENSNVIG00000010109) #33	ATP6V0D1 (ENSNVIG00000010093) #34	AGRP (ENSNVIG00000010084) #36	RIPOR1 (ENSNVIG00000009916) #35
Ferret	MODERN SPECIES	174	PDP2 (ENSMPUG00000019891) #9	CDH16 (ENSMPUG00000005284) #10	RRAD (ENSMPUG00000005296) #11	CIAO2B (ENSMPUG00000005303) #12	CES2 (ENSMPUG00000005332)	CES3 (ENSMPUG00000005350) #13	CBFB (ENSMPUG00000005362) #14	PHAF1 (ENSMPUG00000005369) #15	B3GNT9 (ENSMPUG00000019893) #16	TRADD (ENSMPUG00000005387) #17	FBXL8 (ENSMPUG00000005412) #18	HSF4 (ENSMPUG00000005418) #19	ENSMPUG00000005530	MATCAP1 (ENSMPUG00000005537) #20	EXOC3L1 (ENSMPUG00000005549) #21	E2F4 (ENSMPUG00000005564) #22	ELMO3 (ENSMPUG00000005677) #23	ENSMPUG00000005910 #24	TMEM208 (ENSMPUG00000005954) #25	FHOD1 (ENSMPUG00000006014) #26	SLC9A5 (ENSMPUG00000006032) #27	PLEKHG4 (ENSMPUG00000006141) #28	KCTD19 (ENSMPUG00000006157) #29	LRRC36 (ENSMPUG00000006211) #30	TPPP3 (ENSMPUG00000006277) #31	ZDHHC1 (ENSMPUG00000006284) #32	HSD11B2 (ENSMPUG00000006293) #33	ATP6V0D1 (ENSMPUG00000006345) #34	AGRP (ENSMPUG00000006360) #36	RIPOR1 (ENSMPUG00000006380) #35	CTCF (ENSMPUG00000006401) #37
Canidae	ANCESTRAL SPECIES	11	ENSGT00940000160687 #9	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000154694.k.a	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35	ENSGT00940000156672 #37
Red fox	MODERN SPECIES	86	PDP2 (ENSVVUG00000011059) #9	CDH16 (ENSVVUG00000011064) #10	RRAD (ENSVVUG00000011080) #11	CIAO2B (ENSVVUG00000011091) #12	CES2 (ENSVVUG00000011116)	ENSVVUG00000011153	ENSVVUG00000011164 #14	PHAF1 (ENSVVUG00000011171) #15	B3GNT9 (ENSVVUG00000011177) #16	TRADD (ENSVVUG00000011183) #17	FBXL8 (ENSVVUG00000011188) #18	HSF4 (ENSVVUG00000011195) #19	ENSVVUG00000011543	MATCAP1 (ENSVVUG00000011547) #20	EXOC3L1 (ENSVVUG00000011555) #21	E2F4 (ENSVVUG00000011569) #22	ELMO3 (ENSVVUG00000011584) #23	ENSVVUG00000011596 #24	TMEM208 (ENSVVUG00000011608) #25	SLC9A5 (ENSVVUG00000011891) #27	PLEKHG4 (ENSVVUG00000011993) #28	KCTD19 (ENSVVUG00000012031) #29	LRRC36 (ENSVVUG00000012071) #30	TPPP3 (ENSVVUG00000012076) #31	ZDHHC1 (ENSVVUG00000012083) #32	HSD11B2 (ENSVVUG00000012093) #33	ATP6V0D1 (ENSVVUG00000012104) #34	AGRP (ENSVVUG00000012120) #36	RIPOR1 (ENSVVUG00000012147) #35	CTCF (ENSVVUG00000012154) #37	CARMIL2 (ENSVVUG00000012192)
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00940000160687 #9	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000154694.k.a	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35	ENSGT00940000156672 #37
Dog	DUPLICATION
Dog	MODERN SPECIES	4	ENSCAFG00845009455	ENSCAFG00845009231	ENSCAFG00845009169	YTHDC1 (ENSCAFG00845009010)	ENSCAFG00845008866	ENSCAFG00845008806	ENSCAFG00845008764	TMPRSS11A (ENSCAFG00845008712)	ENSCAFG00845008657	ENSCAFG00845008566	ENSCAFG00845008485	GNRHR (ENSCAFG00845008435)	UBA6 (ENSCAFG00845007757)	STAP1 (ENSCAFG00845007408)	CENPC (ENSCAFG00845007271)	ENSCAFG00845007153 #22	EPHA5 (ENSCAFG00845006153)	TECRL (ENSCAFG00845005649)	ADGRL3 (ENSCAFG00845014364)	ENSCAFG00845014256	ENSCAFG00845014244	ENSCAFG00845014237	ENSCAFG00845014210	ENSCAFG00845014179	POLR2B (ENSCAFG00845014082)	NOA1 (ENSCAFG00845013997)	REST (ENSCAFG00845013968)	SPINK2 (ENSCAFG00845013914)	THEGL (ENSCAFG00845013867)	ENSCAFG00845013850	ARL9 (ENSCAFG00845013838)
Dog	MODERN SPECIES	33	PDP2 (ENSCAFG00845011036) #9	CDH16 (ENSCAFG00845010781) #10	RRAD (ENSCAFG00845010705) #11	CIAO2B (ENSCAFG00845010671) #12	CES2 (ENSCAFG00845010523)	ENSCAFG00845010462	CBFB (ENSCAFG00845010432) #14	PHAF1 (ENSCAFG00845010359) #15	B3GNT9 (ENSCAFG00845010321) #16	FBXL8 (ENSCAFG00845010281) #18	TRADD (ENSCAFG00845010243) #17	HSF4 (ENSCAFG00845010066) #19	HSF4 (ENSCAFG00845009966)	MATCAP1 (ENSCAFG00845009874) #20	EXOC3L1 (ENSCAFG00845009747) #21	ENSCAFG00845009673 #22	ELMO3 (ENSCAFG00845009511) #23	ENSCAFG00845009436 #24	TMEM208 (ENSCAFG00845009370) #25	FHOD1 (ENSCAFG00845009145) #26	SLC9A5 (ENSCAFG00845009040) #27	PLEKHG4 (ENSCAFG00845008847) #28	KCTD19 (ENSCAFG00845008661) #29	LRRC36 (ENSCAFG00845008572) #30	TPPP3 (ENSCAFG00845008424) #31	ZDHHC1 (ENSCAFG00845008324) #32	HSD11B2 (ENSCAFG00845008256) #33	ATP6V0D1 (ENSCAFG00845008188) #34	AGRP (ENSCAFG00845008104) #36	RIPOR1 (ENSCAFG00845007707) #35	CTCF (ENSCAFG00845007437) #37
Dingo	DUPLICATION
Dingo	MODERN SPECIES	2	ENSCAFG00020027102	ENSCAFG00020027103	ENSCAFG00020027107	ENSCAFG00020027109	YTHDC1 (ENSCAFG00020027112)	TMPRSS11E (ENSCAFG00020027116)	ENSCAFG00020027117	TMPRSS11F (ENSCAFG00020027118)	ENSCAFG00020027120	TMPRSS11A (ENSCAFG00020027122)	TMPRSS11D (ENSCAFG00020027124)	ENSCAFG00020027128	GNRHR (ENSCAFG00020027129)	UBA6 (ENSCAFG00020027143)	CENPC (ENSCAFG00020027175)	ENSCAFG00020027180 #22	EPHA5 (ENSCAFG00020027199)	TECRL (ENSCAFG00020027208)	ADGRL3 (ENSCAFG00020027216)	ENSCAFG00020027309	ENSCAFG00020027310	ENSCAFG00020027312	ENSCAFG00020027313	ENSCAFG00020027315	IGFBP7 (ENSCAFG00020027316)	POLR2B (ENSCAFG00020027317)	NOA1 (ENSCAFG00020027319)	ENSCAFG00020027320	ENSCAFG00020027322	ENSCAFG00020027323	THEGL (ENSCAFG00020027324)
Dingo	MODERN SPECIES	373	CA7 (ENSCAFG00020017940) #8	CDH16 (ENSCAFG00020017962) #10	RRAD (ENSCAFG00020018006) #11	CIAO2B (ENSCAFG00020018022) #12	CES2 (ENSCAFG00020018024)	ENSCAFG00020018031	CBFB (ENSCAFG00020018039) #14	PHAF1 (ENSCAFG00020018043) #15	B3GNT9 (ENSCAFG00020018052) #16	TRADD (ENSCAFG00020018054) #17	FBXL8 (ENSCAFG00020018057) #18	HSF4 (ENSCAFG00020018058) #19	ENSCAFG00020018066	MATCAP1 (ENSCAFG00020018068) #20	EXOC3L1 (ENSCAFG00020018073) #21	ENSCAFG00020018080 #22	ELMO3 (ENSCAFG00020018084) #23	ENSCAFG00020018090 #24	TMEM208 (ENSCAFG00020018093) #25	FHOD1 (ENSCAFG00020018094) #26	SLC9A5 (ENSCAFG00020018099) #27	ENSCAFG00020018116 #28	ENSCAFG00020018122 #28	KCTD19 (ENSCAFG00020018130) #29	LRRC36 (ENSCAFG00020018145) #30	TPPP3 (ENSCAFG00020018161) #31	ZDHHC1 (ENSCAFG00020018166) #32	HSD11B2 (ENSCAFG00020018177) #33	ATP6V0D1 (ENSCAFG00020018180) #34	AGRP (ENSCAFG00020018182) #36	RIPOR1 (ENSCAFG00020018185) #35
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00940000164375	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35	ENSGT00940000156672 #37
Equus	ANCESTRAL SPECIES	20	ENSGT00940000160687 #9	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000153793	ENSGT00940000155200 #13	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35	ENSGT00940000156672 #37	ENSGT00940000161003
Donkey	MODERN SPECIES	20	PDP2 (ENSEASG00005025884) #9	CDH16 (ENSEASG00005010892) #10	RRAD (ENSEASG00005010896) #11	CIAO2B (ENSEASG00005031727) #12	CES2 (ENSEASG00005010903)	CES3 (ENSEASG00005010928) #13	CBFB (ENSEASG00005010936) #14	PHAF1 (ENSEASG00005010953) #15	B3GNT9 (ENSEASG00005034023) #16	TRADD (ENSEASG00005011002) #17	FBXL8 (ENSEASG00005034607) #18	HSF4 (ENSEASG00005011004) #19	ENSEASG00005011062	MATCAP1 (ENSEASG00005011064) #20	EXOC3L1 (ENSEASG00005011071) #21	E2F4 (ENSEASG00005011078) #22	ELMO3 (ENSEASG00005011163) #23	TMEM208 (ENSEASG00005012536) #25	FHOD1 (ENSEASG00005012549) #26	SLC9A5 (ENSEASG00005012688) #27	PLEKHG4 (ENSEASG00005012694) #28	KCTD19 (ENSEASG00005012701) #29	LRRC36 (ENSEASG00005012707) #30	TPPP3 (ENSEASG00005028584) #31	ZDHHC1 (ENSEASG00005012723) #32	HSD11B2 (ENSEASG00005012736) #33	ATP6V0D1 (ENSEASG00005012742) #34	AGRP (ENSEASG00005012748) #36	RIPOR1 (ENSEASG00005012769) #35	CTCF (ENSEASG00005012799) #37	CARMIL2 (ENSEASG00005012824)
Horse	MODERN SPECIES	22	CA7 (ENSECAG00000024943) #8	PDP2 (ENSECAG00000006359) #9	CDH16 (ENSECAG00000009969) #10	RRAD (ENSECAG00000006674) #11	CES2 (ENSECAG00000012061)	CIAO2B (ENSECAG00000010902) #12	CES3 (ENSECAG00000010334) #13	CBFB (ENSECAG00000014879) #14	PHAF1 (ENSECAG00000022219) #15	B3GNT9 (ENSECAG00000006409) #16	TRADD (ENSECAG00000013754) #17	FBXL8 (ENSECAG00000034017) #18	HSF4 (ENSECAG00000016708) #19	MATCAP1 (ENSECAG00000024529) #20	EXOC3L1 (ENSECAG00000001268) #21	E2F4 (ENSECAG00000015595) #22	ELMO3 (ENSECAG00000006824) #23	FHOD1 (ENSECAG00000013595) #26	SLC9A5 (ENSECAG00000020279) #27	KCTD19 (ENSECAG00000014064) #29	PLEKHG4 (ENSECAG00000006999) #28	LRRC36 (ENSECAG00000021516) #30	TPPP3 (ENSECAG00000007133) #31	ZDHHC1 (ENSECAG00000010730) #32	HSD11B2 (ENSECAG00000014152) #33	ATP6V0D1 (ENSECAG00000015817) #34	RIPOR1 (ENSECAG00000018681) #35	AGRP (ENSECAG00000016828) #36	CTCF (ENSECAG00000015924) #37	CARMIL2 (ENSECAG00000010729)	ACD (ENSECAG00000020293)
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00940000160687 #9	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00940000164375	ENSGT00940000162924	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35	ENSGT00940000156672 #37
Megabat	MODERN SPECIES	2556															EXOC3L1 (ENSPVAG00000005273) #21	E2F4 (ENSPVAG00000005274) #22	ELMO3 (ENSPVAG00000005275) #23	ENSPVAG00000005276 #24	TMEM208 (ENSPVAG00000005277) #25	FHOD1 (ENSPVAG00000005280) #26	SLC9A5 (ENSPVAG00000005281) #27
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00550000074901	ENSGT00940000159757 #8	ENSGT00940000160687 #9	ENSGT00940000161650 #10	ENSGT00940000159836 #11	ENSGT00390000017697.b #12	ENSGT00390000018132 #14	ENSGT00940000153528.a.b.a.a #15	ENSGT00940000162243 #16	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT00390000004417.b #20	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30	ENSGT00940000153875.d.b #31	ENSGT00940000159191 #32	ENSGT00940000159716 #33	ENSGT00390000002200.a.a #34	ENSGT00940000154258.b #36	ENSGT00940000153717.b #35	ENSGT00940000156672 #37
Greater horseshoe bat	MODERN SPECIES	6	TERB1 (ENSRFEG00010011648) #7	NAE1 (ENSRFEG00010011905)	CA7 (ENSRFEG00010012260) #8	CDH16 (ENSRFEG00010012368) #10	RRAD (ENSRFEG00010012702) #11	CIAO2B (ENSRFEG00010012765) #12	CBFB (ENSRFEG00010012858) #14	PHAF1 (ENSRFEG00010012954) #15	B3GNT9 (ENSRFEG00010013003) #16	TRADD (ENSRFEG00010013012) #17	FBXL8 (ENSRFEG00010013130) #18	HSF4 (ENSRFEG00010013178) #19	NOL3 (ENSRFEG00010013567)	MATCAP1 (ENSRFEG00010013678) #20	EXOC3L1 (ENSRFEG00010013737) #21	E2F4 (ENSRFEG00010013945) #22	ELMO3 (ENSRFEG00010014029) #23	ENSRFEG00010014143 #24	ENSRFEG00010014162 #24	TMEM208 (ENSRFEG00010014189) #25	FHOD1 (ENSRFEG00010014292) #26	SLC9A5 (ENSRFEG00010014393) #27	ENSRFEG00010014828 #28	KCTD19 (ENSRFEG00010014975) #29	LRRC36 (ENSRFEG00010015268) #30	TPPP3 (ENSRFEG00010015768) #31	ZDHHC1 (ENSRFEG00010015816) #32	HSD11B2 (ENSRFEG00010015871) #33	ATP6V0D1 (ENSRFEG00010015904) #34	AGRP (ENSRFEG00010015961) #36	RIPOR1 (ENSRFEG00010016037) #35
Microbat	MODERN SPECIES	1211	NAE1 (ENSMLUG00000012976)	CA7 (ENSMLUG00000012984) #8	PDP2 (ENSMLUG00000014958) #9	CDH16 (ENSMLUG00000013705) #10	RRAD (ENSMLUG00000013700) #11	CIAO2B (ENSMLUG00000014953) #12	CBFB (ENSMLUG00000010999) #14	ENSMLUG00000011012 #15	B3GNT9 (ENSMLUG00000023514) #16	TRADD (ENSMLUG00000011054) #17	FBXL8 (ENSMLUG00000011063) #18	HSF4 (ENSMLUG00000011083) #19	ENSMLUG00000011138	MATCAP1 (ENSMLUG00000011150) #20	EXOC3L1 (ENSMLUG00000001121) #21	E2F4 (ENSMLUG00000023162) #22	ELMO3 (ENSMLUG00000001134) #23	ENSMLUG00000001143 #24	TMEM208 (ENSMLUG00000001149) #25	FHOD1 (ENSMLUG00000001154) #26	SLC9A5 (ENSMLUG00000001170) #27	PLEKHG4 (ENSMLUG00000001181) #28	KCTD19 (ENSMLUG00000001193) #29	LRRC36 (ENSMLUG00000001203) #30	ENSMLUG00000026149	TPPP3 (ENSMLUG00000005171) #31	ZDHHC1 (ENSMLUG00000005174) #32	HSD11B2 (ENSMLUG00000024893) #33	ATP6V0D1 (ENSMLUG00000005187) #34	AGRP (ENSMLUG00000005196) #36	RIPOR1 (ENSMLUG00000005201) #35
Eulipotyphla	ANCESTRAL SPECIES	3										ENSGT00940000153528.a.b.a.a #15	ENSGT00390000002016 #17	ENSGT00420000029943 #18	ENSGT00940000158063 #19	ENSGT00510000049353	ENSGT01030000234613.a.b #21	ENSGT00940000156252 #22	ENSGT00940000159455 #23	ENSGT00940000160637 #24	ENSGT00390000008139 #25	ENSGT00940000160212 #26	ENSGT00940000159190 #27	ENSGT00940000158845 #28	ENSGT00390000007606 #29	ENSGT00530000063884.b #30
Hedgehog	MODERN SPECIES	8614																E2F4 (ENSEEUG00000014066) #22	ELMO3 (ENSEEUG00000014436) #23	ENSEEUG00000014542 #24	TMEM208 (ENSEEUG00000014664) #25	FHOD1 (ENSEEUG00000003091) #26	SLC9A5 (ENSEEUG00000003251) #27	ENSEEUG00000003436 #28	KCTD19 (ENSEEUG00000003698) #29