Mus_A	ANCESTRAL SPECIES	14	ENSGT00940000160328 #7	ENSGT00950000183041.C #8	ENSGT00950000182772.B.a.a #9	ENSGT00940000155679 #10	ENSGT00550000074949 #11	ENSGT00390000010283 #12	ENSGT00390000012355.A.a #13	ENSGT00530000063681.b.a #14	ENSGT00940000154290.b #15	ENSGT00950000182767.a.b.b #16	ENSGT01030000234623.a.b.a #17	ENSGT00940000155227 #18	ENSGT00950000182919.B.b #19	ENSGT00940000159696 #20	ENSGT00940000156640 #21	ENSGT00940000156354 #22	ENSGT00510000046704.b.a #23	ENSGT00390000003122.c.a #24	ENSGT00390000003122.c.b #25	ENSGT00940000158176 #26	ENSGT00940000158270 #28	ENSGT00990000203589.b.b #30	ENSGT00940000157310 #31	ENSGT00900000143364 #32	ENSGT00940000157603 #33	ENSGT00390000009710 #34	ENSGT00940000159952 #35	ENSGT00390000017026.c #36	ENSGT00940000157817 #37	ENSGT00940000164103	ENSGT00730000111121
Ryukyu mouse	MODERN SPECIES	4	Acot12 (MGP_CAROLIEiJ_G0018763) #7	Zcchc9 (MGP_CAROLIEiJ_G0018764) #8	Ckmt2 (MGP_CAROLIEiJ_G0018765) #9	Rasgrf2 (MGP_CAROLIEiJ_G0018766) #10	Msh3 (MGP_CAROLIEiJ_G0018767) #11	Dhfr (MGP_CAROLIEiJ_G0018768) #12	Ankrd34b (MGP_CAROLIEiJ_G0018769) #13	Fam151b (MGP_CAROLIEiJ_G0018770) #14	Zfyve16 (MGP_CAROLIEiJ_G0018771) #15	Spz1 (MGP_CAROLIEiJ_G0018772) #16	Serinc5 (MGP_CAROLIEiJ_G0018773) #17	Thbs4 (MGP_CAROLIEiJ_G0018774) #18	Mtx3 (MGP_CAROLIEiJ_G0018775) #19	MGP_CAROLIEiJ_G0018776 #20	Tent2 (MGP_CAROLIEiJ_G0018777) #21	Homer1 (MGP_CAROLIEiJ_G0018778) #22	Jmy (MGP_CAROLIEiJ_G0018779) #23	MGP_CAROLIEiJ_G0018780 #24	Bhmt2 (MGP_CAROLIEiJ_G0018781) #25	Dmgdh (MGP_CAROLIEiJ_G0018782) #26	MGP_CAROLIEiJ_G0018783 #27	Arsb (MGP_CAROLIEiJ_G0018784) #28	MGP_CAROLIEiJ_G0018785 #29	Lhfpl2 (MGP_CAROLIEiJ_G0018786) #30	Scamp1 (MGP_CAROLIEiJ_G0018787) #31	MGP_CAROLIEiJ_G0018788 #32	Ap3b1 (MGP_CAROLIEiJ_G0018789) #33	Tbca (MGP_CAROLIEiJ_G0018790) #34	Otp (MGP_CAROLIEiJ_G0018791) #35	MGP_CAROLIEiJ_G0018792 #36	Pde8b (MGP_CAROLIEiJ_G0018793) #37
Mus_B	ANCESTRAL SPECIES	13	ENSGT00940000160328 #7	ENSGT00950000183041.C #8	ENSGT00950000182772.B.a.a #9	ENSGT00940000155679 #10	ENSGT00550000074949 #11	ENSGT00390000010283 #12	ENSGT00390000012355.A.a #13	ENSGT00530000063681.b.a #14	ENSGT00940000154290.b #15	ENSGT00950000182767.a.b.b #16	ENSGT01030000234623.a.b.a #17	ENSGT00940000155227 #18	ENSGT00950000182919.B.b #19	ENSGT00940000159696 #20	ENSGT00940000156640 #21	ENSGT00940000156354 #22	ENSGT00510000046704.b.a #23	ENSGT00390000003122.c.a #24	ENSGT00390000003122.c.b #25	ENSGT00940000158176 #26	ENSGT00940000158270 #28	ENSGT00990000203589.b.b #30	ENSGT00940000157310 #31	ENSGT00900000143364 #32	ENSGT00940000157603 #33	ENSGT00390000009710 #34	ENSGT00940000159952 #35	ENSGT00390000017026.c #36	ENSGT00940000157817 #37	ENSGT00940000164103	ENSGT00730000111121
Mouse	MODERN SPECIES	4	Zcchc9 (ENSMUSG00000021621) #8	Ckmt2 (ENSMUSG00000021622) #9	Rasgrf2 (ENSMUSG00000021708) #10	Msh3 (ENSMUSG00000014850) #11	Gm20379 (ENSMUSG00000100622)	Dhfr (ENSMUSG00000021707) #12	Ankrd34b (ENSMUSG00000045034) #13	Fam151b (ENSMUSG00000034334) #14	Zfyve16 (ENSMUSG00000021706) #15	Spz1 (ENSMUSG00000046957) #16	Serinc5 (ENSMUSG00000021703) #17	Thbs4 (ENSMUSG00000021702) #18	Mtx3 (ENSMUSG00000021704) #19	Cmya5 (ENSMUSG00000047419) #20	Tent2 (ENSMUSG00000042167) #21	Homer1 (ENSMUSG00000007617) #22	Jmy (ENSMUSG00000021690) #23	Bhmt (ENSMUSG00000074768) #24	Bhmt2 (ENSMUSG00000042118) #25	Dmgdh (ENSMUSG00000042102) #26	Arsb (ENSMUSG00000042082) #28	Lhfpl2 (ENSMUSG00000045312) #30	Scamp1 (ENSMUSG00000021687) #31	Ap3b1 (ENSMUSG00000021686) #33	Tbca (ENSMUSG00000042043) #34	Otp (ENSMUSG00000021685) #35	Wdr41 (ENSMUSG00000042015) ##36	Pde8b (ENSMUSG00000021684) #37	Zbed3 (ENSMUSG00000041995)	Aggf1 (ENSMUSG00000021681)	Crhbp (ENSMUSG00000021680)
Mus_C	ANCESTRAL SPECIES	10	ENSGT00940000160328 #7	ENSGT00950000183041.C #8	ENSGT00950000182772.B.a.a #9	ENSGT00940000155679 #10	ENSGT00550000074949 #11	ENSGT00390000010283 #12	ENSGT00390000012355.A.a #13	ENSGT00530000063681.b.a #14	ENSGT00940000154290.b #15	ENSGT00950000182767.a.b.b #16	ENSGT01030000234623.a.b.a #17	ENSGT00940000155227 #18	ENSGT00950000182919.B.b #19	ENSGT00940000159696 #20	ENSGT00940000156640 #21	ENSGT00940000156354 #22	ENSGT00510000046704.b.a #23	ENSGT00390000003122.c.a.a #24	ENSGT00390000003122.c.b #25	ENSGT00940000158176 #26	ENSGT00940000158270 #28	ENSGT00990000203589.b.b #30	ENSGT00940000157310 #31	ENSGT00900000143364 #32	ENSGT00940000157603 #33	ENSGT00390000009710 #34	ENSGT00940000159952 #35	ENSGT00390000017026.c #36	ENSGT00940000157817 #37	ENSGT00940000164103	ENSGT00730000111121
spretus	MODERN SPECIES	4	Zcchc9 (MGP_SPRETEiJ_G0019648) #8	Ckmt2 (MGP_SPRETEiJ_G0019649) #9	Rasgrf2 (MGP_SPRETEiJ_G0019650) #10	Msh3 (MGP_SPRETEiJ_G0019651) #11	MGP_SPRETEiJ_G0019652	Dhfr (MGP_SPRETEiJ_G0019653) #12	Ankrd34b (MGP_SPRETEiJ_G0019654) #13	Fam151b (MGP_SPRETEiJ_G0019655) #14	Zfyve16 (MGP_SPRETEiJ_G0019656) #15	Spz1 (MGP_SPRETEiJ_G0019657) #16	Serinc5 (MGP_SPRETEiJ_G0019658) #17	Thbs4 (MGP_SPRETEiJ_G0019659) #18	Mtx3 (MGP_SPRETEiJ_G0019660) #19	Cmya5 (MGP_SPRETEiJ_G0019661) #20	Tent2 (MGP_SPRETEiJ_G0019662) #21	Homer1 (MGP_SPRETEiJ_G0019663) #22	Jmy (MGP_SPRETEiJ_G0019664) #23	MGP_SPRETEiJ_G0019665 #24	Bhmt2 (MGP_SPRETEiJ_G0019666) #25	Dmgdh (MGP_SPRETEiJ_G0019667) #26	Arsb (MGP_SPRETEiJ_G0019668) #28	Lhfpl2 (MGP_SPRETEiJ_G0019669) #30	Scamp1 (MGP_SPRETEiJ_G0019670) #31	MGP_SPRETEiJ_G0019671 #32	Ap3b1 (MGP_SPRETEiJ_G0019672) #33	Tbca (MGP_SPRETEiJ_G0019673) #34	Otp (MGP_SPRETEiJ_G0019674) #35	MGP_SPRETEiJ_G0019675 #36	Pde8b (MGP_SPRETEiJ_G0019676) #37	Zbed3 (MGP_SPRETEiJ_G0019677)	Aggf1 (MGP_SPRETEiJ_G0019678)
Steppe mouse	MODERN SPECIES	3412					Msh3 (ENSMSIG00000012586) #11	Dhfr (ENSMSIG00000012568) #12	Ankrd34b (ENSMSIG00000012559) #13	ENSMSIG00000012548 #14	Zfyve16 (ENSMSIG00000012506) #15	Spz1 (ENSMSIG00000012499) #16	Serinc5 (ENSMSIG00000012451) #17	Thbs4 (ENSMSIG00000012423) #18	Mtx3 (ENSMSIG00000012405) #19	Cmya5 (ENSMSIG00000012218) #20	Tent2 (ENSMSIG00000012117) #21	Homer1 (ENSMSIG00000011873) #22	ENSMSIG00000011865	ENSMSIG00000011858	ENSMSIG00000011824	Jmy (ENSMSIG00000011806) #23	ENSMSIG00000011793	Bhmt2 (ENSMSIG00000011736) #25	Dmgdh (ENSMSIG00000011670) #26	Arsb (ENSMSIG00000011652) #28	Lhfpl2 (ENSMSIG00000011618) #30	Scamp1 (ENSMSIG00000011596) #31	Ap3b1 (ENSMSIG00000011521) #33	ENSMSIG00000011491 #34	Otp (ENSMSIG00000011481) #35	ENSMSIG00000011421 #36	Pde8b (ENSMSIG00000011209) #37