Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000159461	ENSGT00940000155781 #8	ENSGT00950000183146.b #7	ENSGT00940000158909 #9	ENSGT00940000157802 #10	ENSGT00940000162824 #11	ENSGT00530000063849.A #12	ENSGT00940000161447 #13	ENSGT00390000007696.g #14	ENSGT00940000156468 #15	ENSGT00940000163598 #16	ENSGT00940000157842 #17	ENSGT00390000006665.a #18	ENSGT00940000157976 #19	ENSGT00940000156617 #21	ENSGT00940000156703 #22	ENSGT00940000160395 #23	ENSGT00940000157127 #24	ENSGT00940000155125	ENSGT00940000157756	ENSGT00390000000577	ENSGT00390000013347.b	ENSGT01020000230364.a.a.a.a.a.a	ENSGT00390000000980	ENSGT01020000230364.a.a.a.a.b	ENSGT01020000230364.a.a.a.b	ENSGT00390000008040.m	ENSGT00940000155664	ENSGT00940000153820.a	ENSGT00390000001414	ENSGT00440000038072.c
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000159461	ENSGT00940000155781 #8	ENSGT00950000183146.b #7	ENSGT00940000158909 #9	ENSGT00940000157802 #10	ENSGT00940000162824 #11	ENSGT00530000063849.A #12	ENSGT00940000161447 #13	ENSGT00390000007696.g #14	ENSGT00940000156468 #15	ENSGT00940000163598 #16	ENSGT00940000157842 #17	ENSGT00390000006665.a #18	ENSGT00940000157976 #19	ENSGT00940000156617 #21	ENSGT00940000156703 #22	ENSGT00940000160395 #23	ENSGT00940000157127 #24	ENSGT00940000155125	ENSGT00940000157756	ENSGT00390000000577	ENSGT00390000013347.b	ENSGT01020000230364.a.a.a.a.a.a	ENSGT00390000000980	ENSGT01020000230364.a.a.a.a.b	ENSGT01020000230364.a.a.a.b	ENSGT00390000008040.m	ENSGT00940000155664	ENSGT00940000153820.a	ENSGT00390000001414	ENSGT00440000038072.c
Mus_C	ANCESTRAL SPECIES	23	ENSGT00940000159461	ENSGT00940000155781 #8	ENSGT00950000183146.b #7	ENSGT00940000158909 #9	ENSGT00940000157802 #10	ENSGT00940000162824 #11	ENSGT00530000063849.A #12	ENSGT00940000161447 #13	ENSGT00390000007696.g #14	ENSGT00940000156468 #15	ENSGT00940000163598 #16	ENSGT00940000157842 #17	ENSGT00390000006665.a #18	ENSGT00940000157976 #19	ENSGT00940000156617 #21	ENSGT00940000156703 #22	ENSGT00940000160395 #23	ENSGT00940000157127 #24	ENSGT00940000155125	ENSGT00940000157756	ENSGT00390000000577	ENSGT00390000013347.b	ENSGT01020000230364.a.a.a.a.a.a	ENSGT00390000000980	ENSGT01020000230364.a.a.a.a.b	ENSGT01020000230364.a.a.a.b	ENSGT00390000008040.m	ENSGT00940000155664	ENSGT00940000153820.a	ENSGT00390000001414	ENSGT00440000038072.c
Steppe mouse	MODERN SPECIES	2942	Amigo3 (ENSMSIG00000024086) #7	Rnf123 (ENSMSIG00000023874) #8	Gmppb (ENSMSIG00000023845) #9	Ip6k1 (ENSMSIG00000023836) #10	Cdhr4 (ENSMSIG00000023775) #11	Inka1 (ENSMSIG00000023762) #12	Uba7 (ENSMSIG00000023739) #13	Traip (ENSMSIG00000023709) #14	Camkv (ENSMSIG00000023655) #15	Actl11 (ENSMSIG00000023648) #16	Mst1r (ENSMSIG00000023606) #17	Mon1a (ENSMSIG00000023585) #18	Rbm6 (ENSMSIG00000023504) #19	ENSMSIG00000023499 #20	Rbm5 (ENSMSIG00000023454) #21	Sema3f (ENSMSIG00000023389) #22	Gnat1 (ENSMSIG00000023370) #23	ENSMSIG00000020844 #24
spretus	MODERN SPECIES	18	Amigo3 (MGP_SPRETEiJ_G0033820) #7	Rnf123 (MGP_SPRETEiJ_G0033819) #8	Gmppb (MGP_SPRETEiJ_G0033818) #9	Ip6k1 (MGP_SPRETEiJ_G0033817) #10	Cdhr4 (MGP_SPRETEiJ_G0033815) #11	Inka1 (MGP_SPRETEiJ_G0033814) #12	MGP_SPRETEiJ_G0033813	MGP_SPRETEiJ_G0033812 #13	Traip (MGP_SPRETEiJ_G0033811) #14	Camkv (MGP_SPRETEiJ_G0033810) #15	Actl11 (MGP_SPRETEiJ_G0033809) #16	Mst1r (MGP_SPRETEiJ_G0033808) #17	Mon1a (MGP_SPRETEiJ_G0033807) #18	MGP_SPRETEiJ_G0033806 #19	Rbm5 (MGP_SPRETEiJ_G0033805) #21	Sema3f (MGP_SPRETEiJ_G0033804) #22	Gnat1 (MGP_SPRETEiJ_G0033803) #23	Slc38a3 (MGP_SPRETEiJ_G0033802) #24	Gnai2 (MGP_SPRETEiJ_G0033801)	MGP_SPRETEiJ_G0033800	Ifrd2 (MGP_SPRETEiJ_G0033799)	Hyal3 (MGP_SPRETEiJ_G0033798)	Naa80 (MGP_SPRETEiJ_G0033797)	Hyal1 (MGP_SPRETEiJ_G0033796)	Hyal2 (MGP_SPRETEiJ_G0033795)	Tusc2 (MGP_SPRETEiJ_G0033794)	Rassf1 (MGP_SPRETEiJ_G0033793)	Zmynd10 (MGP_SPRETEiJ_G0033792)	Nprl2 (MGP_SPRETEiJ_G0033791)	Cyb561d2 (MGP_SPRETEiJ_G0033790)	Tmem115 (MGP_SPRETEiJ_G0033789)
Mouse	MODERN SPECIES	18	Mst1 (ENSMUSG00000032591)	Amigo3 (ENSMUSG00000032593) #7	Rnf123 (ENSMUSG00000041528) #8	Gmppb (ENSMUSG00000070284) #9	Ip6k1 (ENSMUSG00000032594) #10	Cdhr4 (ENSMUSG00000032595) #11	Inka1 (ENSMUSG00000042106) #12	Uba7 (ENSMUSG00000032596) #13	Traip (ENSMUSG00000032586) #14	Camkv (ENSMUSG00000032936) #15	Actl11 (ENSMUSG00000066368) #16	Mst1r (ENSMUSG00000032584) #17	Mon1a (ENSMUSG00000032583) #18	Rbm6 (ENSMUSG00000032582) #19	Rbm5 (ENSMUSG00000032580) #21	Sema3f (ENSMUSG00000034684) #22	Gnat1 (ENSMUSG00000034837) #23	Slc38a3 (ENSMUSG00000010064) #24	Gnai2 (ENSMUSG00000032562)	Sema3b (ENSMUSG00000057969)	Lsmem2 (ENSMUSG00000103409)	Ifrd2 (ENSMUSG00000010048)	Hyal3 (ENSMUSG00000036091)	Naa80 (ENSMUSG00000079334)	Hyal1 (ENSMUSG00000010051)	Hyal2 (ENSMUSG00000010047)	Tusc2 (ENSMUSG00000010054)	Rassf1 (ENSMUSG00000010067)	Zmynd10 (ENSMUSG00000010044)	Nprl2 (ENSMUSG00000010057)	Cyb561d2 (ENSMUSG00000037190)
Ryukyu mouse	MODERN SPECIES	18	Amigo3 (MGP_CAROLIEiJ_G0032675) #7	Rnf123 (MGP_CAROLIEiJ_G0032674) #8	Gmppb (MGP_CAROLIEiJ_G0032673) #9	Ip6k1 (MGP_CAROLIEiJ_G0032672) #10	Cdhr4 (MGP_CAROLIEiJ_G0032670) #11	Inka1 (MGP_CAROLIEiJ_G0032669) #12	MGP_CAROLIEiJ_G0032668	Uba7 (MGP_CAROLIEiJ_G0032667) #13	Traip (MGP_CAROLIEiJ_G0032666) #14	Camkv (MGP_CAROLIEiJ_G0032665) #15	Actl11 (MGP_CAROLIEiJ_G0032664) #16	Mst1r (MGP_CAROLIEiJ_G0032663) #17	Mon1a (MGP_CAROLIEiJ_G0032662) #18	Rbm6 (MGP_CAROLIEiJ_G0032661) #19	Rbm5 (MGP_CAROLIEiJ_G0032660) #21	Sema3f (MGP_CAROLIEiJ_G0032659) #22	Gnat1 (MGP_CAROLIEiJ_G0032658) #23	Slc38a3 (MGP_CAROLIEiJ_G0032657) #24	Gnai2 (MGP_CAROLIEiJ_G0032656)	MGP_CAROLIEiJ_G0032655	Ifrd2 (MGP_CAROLIEiJ_G0032654)	Hyal3 (MGP_CAROLIEiJ_G0032653)	Naa80 (MGP_CAROLIEiJ_G0032652)	Hyal1 (MGP_CAROLIEiJ_G0032651)	Hyal2 (MGP_CAROLIEiJ_G0032650)	Tusc2 (MGP_CAROLIEiJ_G0032649)	Rassf1 (MGP_CAROLIEiJ_G0032648)	Zmynd10 (MGP_CAROLIEiJ_G0032647)	Nprl2 (MGP_CAROLIEiJ_G0032646)	Cyb561d2 (MGP_CAROLIEiJ_G0032645)	Tmem115 (MGP_CAROLIEiJ_G0032644)