Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000155861.C #22
Gnathostomata	ANCESTRAL SPECIES	351														ENSGT00940000158239	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000168201.a	ENSGT00940000156444 #23	ENSGT00940000168404	ENSGT00390000005159 #24	ENSGT00500000044939	ENSGT00940000156089
Euteleostomi	ANCESTRAL SPECIES	107						ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT01030000234607.A.b	ENSGT00530000063410.b	ENSGT00940000162403	ENSGT00390000015769.B	ENSGT00940000158781	ENSGT00940000160642	ENSGT00950000183014.f.a
Sarcopterygii	ANCESTRAL SPECIES	145							ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000168201.a	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00970000198411	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000164225	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000018807
Tetrapoda	ANCESTRAL SPECIES	6	ENSGT00940000176171	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000003964.b	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00970000198411	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000012561.b
Amniota	ANCESTRAL SPECIES	6	ENSGT00940000176171	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000003964.b	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Mammalia	ANCESTRAL SPECIES	6	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Theria	ANCESTRAL SPECIES	5	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Eutheria	ANCESTRAL SPECIES	10	ENSGT00940000156552	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT01090000263468	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT01090000263468	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Primates	ANCESTRAL SPECIES	13	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT01090000263468	ENSGT00940000153534.A	ENSGT00940000154319.u.b	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT01090000263468	ENSGT00940000153534.A	ENSGT00940000154319.u.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00950000183314	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00950000183314	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228
Rhinopithecus	ANCESTRAL SPECIES	83															ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i	ENSGT00940000158202	ENSGT00910000147335	ENSGT00390000002219.e	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a
Black snub-nosed monkey	MODERN SPECIES	1405															CDK15 (ENSRBIG00000042953) #21	ALS2 (ENSRBIG00000041076) #22	MPP4 (ENSRBIG00000036934) #23	TMEM237 (ENSRBIG00000042637) #24
Golden snub-nosed monkey	MODERN SPECIES	2976															CDK15 (ENSRROG00000033373) #21	ALS2 (ENSRROG00000042989) #22	MPP4 (ENSRROG00000020037) #23	TMEM237 (ENSRROG00000043593) #24	C2CD6 (ENSRROG00000043775)	STRADB (ENSRROG00000034956)	ENSRROG00000040838	TRAK2 (ENSRROG00000039077)
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00950000183314	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590
Vervet Monkey	DUPLICATION
Vervet Monkey	MODERN SPECIES	1	ABI2 (ENSCSAG00000010327)	CYP20A1 (ENSCSAG00000010341)	NBEAL1 (ENSCSAG00000010364)	CARF (ENSCSAG00000010380)	ENSCSAG00000010442	ICA1L (ENSCSAG00000010466)	FAM117B (ENSCSAG00000010474)	BMPR2 (ENSCSAG00000010485)	NOP58 (ENSCSAG00000010496)	ENSCSAG00000010504	ENSCSAG00000010514	ENSCSAG00000010526	FZD7 (ENSCSAG00000018768)	CDK15 (ENSCSAG00000010541) #21	ENSCSAG00000010553 #22	ENSCSAG00000010567 #22	MPP4 (ENSCSAG00000010593) #23	TMEM237 (ENSCSAG00000010640) #24	C2CD6 (ENSCSAG00000010715)	STRADB (ENSCSAG00000010744)	TRAK2 (ENSCSAG00000010758)	FLACC1 (ENSCSAG00000010769)	CASP8 (ENSCSAG00000010781)	CASP10 (ENSCSAG00000010787)	CFLAR (ENSCSAG00000010798)	NDUFB3 (ENSCSAG00000010804)	HYCC2 (ENSCSAG00000010815)	ORC2 (ENSCSAG00000010834)	NIF3L1 (ENSCSAG00000010842)	PPIL3 (ENSCSAG00000010852)	CLK1 (ENSCSAG00000010924)
Vervet Monkey	MODERN SPECIES	1	RAPH1 (ENSCSAG00000010318)	ABI2 (ENSCSAG00000010327)	CYP20A1 (ENSCSAG00000010341)	NBEAL1 (ENSCSAG00000010364)	CARF (ENSCSAG00000010380)	ENSCSAG00000010442	ICA1L (ENSCSAG00000010466)	FAM117B (ENSCSAG00000010474)	BMPR2 (ENSCSAG00000010485)	NOP58 (ENSCSAG00000010496)	ENSCSAG00000010504	ENSCSAG00000010514	ENSCSAG00000010526	FZD7 (ENSCSAG00000018768)	CDK15 (ENSCSAG00000010541) #21	ENSCSAG00000010553 #22	ENSCSAG00000010567 #22	MPP4 (ENSCSAG00000010593) #23	TMEM237 (ENSCSAG00000010640) #24	C2CD6 (ENSCSAG00000010715)	STRADB (ENSCSAG00000010744)	TRAK2 (ENSCSAG00000010758)	FLACC1 (ENSCSAG00000010769)	CASP8 (ENSCSAG00000010781)	CASP10 (ENSCSAG00000010787)	CFLAR (ENSCSAG00000010798)	NDUFB3 (ENSCSAG00000010804)	HYCC2 (ENSCSAG00000010815)	ORC2 (ENSCSAG00000010834)	NIF3L1 (ENSCSAG00000010842)	PPIL3 (ENSCSAG00000010852)
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00950000183314	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00910000146883.C	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228
Macaca	ANCESTRAL SPECIES	15	ENSGT00940000156552.b	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00860000133854	ENSGT00390000000685.o.a	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00910000146883.C	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228
Pig-tailed macaque	MODERN SPECIES	409	ABI2 (ENSMNEG00000028519)	CYP20A1 (ENSMNEG00000045164)	NBEAL1 (ENSMNEG00000044041)	CARF (ENSMNEG00000033105)	ENSMNEG00000027411	ICA1L (ENSMNEG00000039428)	FAM117B (ENSMNEG00000033073)	BMPR2 (ENSMNEG00000032368)	NOP58 (ENSMNEG00000012760)	ENSMNEG00000041929	KIAA2012 (ENSMNEG00000030605)	ENSMNEG00000029108	FZD7 (ENSMNEG00000026832)	CDK15 (ENSMNEG00000043552) #21	ENSMNEG00000036670	ALS2 (ENSMNEG00000032184) #22	MPP4 (ENSMNEG00000033893) #23	TMEM237 (ENSMNEG00000029387) #24	C2CD6 (ENSMNEG00000028303)	STRADB (ENSMNEG00000030956)	TRAK2 (ENSMNEG00000036459)	FLACC1 (ENSMNEG00000030040)	CASP8 (ENSMNEG00000039649)	ENSMNEG00000040361	CASP10 (ENSMNEG00000036720)	CFLAR (ENSMNEG00000043615)	ENSMNEG00000032011	ENSMNEG00000029934	HYCC2 (ENSMNEG00000032637)	ENSMNEG00000024082	ORC2 (ENSMNEG00000030603)
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00940000156552.b	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Crab-eating macaque	MODERN SPECIES	3	ENSMFAG00000065796	NBEAL1 (ENSMFAG00000032529)	CARF (ENSMFAG00000042636)	ENSMFAG00000044326	ENSMFAG00000048371	ENSMFAG00000055750	ICA1L (ENSMFAG00000046002)	FAM117B (ENSMFAG00000045349)	BMPR2 (ENSMFAG00000032075)	ENSMFAG00000055450	NOP58 (ENSMFAG00000036935)	ENSMFAG00000031319	ENSMFAG00000030831	KIAA2012 (ENSMFAG00000043184)	CDK15 (ENSMFAG00000002188) #21	ALS2 (ENSMFAG00000039968) #22	MPP4 (ENSMFAG00000038003) #23	TMEM237 (ENSMFAG00000039637) #24	C2CD6 (ENSMFAG00000037284)	STRADB (ENSMFAG00000040280)	TRAK2 (ENSMFAG00000046205)	FLACC1 (ENSMFAG00000003322)	CASP8 (ENSMFAG00000034568)	CASP10 (ENSMFAG00000031741)	ENSMFAG00000061517	ENSMFAG00000060351	CFLAR (ENSMFAG00000042284)	NDUFB3 (ENSMFAG00000030964)	HYCC2 (ENSMFAG00000032144)	ORC2 (ENSMFAG00000040620)	NIF3L1 (ENSMFAG00000003012)
Rhesus	MODERN SPECIES	3	ABI2 (ENSMMUG00000000312)	CYP20A1 (ENSMMUG00000005971)	NBEAL1 (ENSMMUG00000006420)	CARF (ENSMMUG00000006418)	WDR12 (ENSMMUG00000043068)	ENSMMUG00000059397	ICA1L (ENSMMUG00000017364)	FAM117B (ENSMMUG00000021152)	BMPR2 (ENSMMUG00000009009)	ENSMMUG00000061021	NOP58 (ENSMMUG00000000582)	SUMO1 (ENSMMUG00000005240)	KIAA2012 (ENSMMUG00000001883)	FZD7 (ENSMMUG00000045285)	CDK15 (ENSMMUG00000014321) #21	ALS2 (ENSMMUG00000018155) #22	MPP4 (ENSMMUG00000018151) #23	TMEM237 (ENSMMUG00000018147) #24	C2CD6 (ENSMMUG00000018144)	STRADB (ENSMMUG00000018141)	TRAK2 (ENSMMUG00000023812)	FLACC1 (ENSMMUG00000018356)	CASP8 (ENSMMUG00000031296)	CASP10 (ENSMMUG00000031297)	CFLAR (ENSMMUG00000012310)	NDUFB3 (ENSMMUG00000060044)	HYCC2 (ENSMMUG00000012224)	ORC2 (ENSMMUG00000014460)	NIF3L1 (ENSMMUG00000006639)	PPIL3 (ENSMMUG00000006638)	CLK1 (ENSMMUG00000006640)
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00950000183314	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00910000146883.C	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228
Cercopithecinae_d	ANCESTRAL SPECIES		ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00950000183314	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00910000146883.C	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228
Sooty mangabey	MODERN SPECIES	570	CYP20A1 (ENSCATG00000034415)	NBEAL1 (ENSCATG00000036478)	CARF (ENSCATG00000035061)	ENSCATG00000035496	ICA1L (ENSCATG00000036911)	FAM117B (ENSCATG00000033570)	ENSCATG00000033526	BMPR2 (ENSCATG00000033192)	NOP58 (ENSCATG00000037684)	ENSCATG00000035585	ENSCATG00000033452	KIAA2012 (ENSCATG00000034304)	FZD7 (ENSCATG00000004913)	ENSCATG00000032200	CDK15 (ENSCATG00000033163) #21	ALS2 (ENSCATG00000033668) #22	MPP4 (ENSCATG00000035366) #23	TMEM237 (ENSCATG00000032238) #24	C2CD6 (ENSCATG00000031983)	STRADB (ENSCATG00000031887)	TRAK2 (ENSCATG00000035925)	FLACC1 (ENSCATG00000031292)	ENSCATG00000033219	CASP8 (ENSCATG00000036996)	ENSCATG00000032008	ENSCATG00000030927	CFLAR (ENSCATG00000031715)	NDUFB3 (ENSCATG00000035455)	HYCC2 (ENSCATG00000027074)	ENSCATG00000002724	ORC2 (ENSCATG00000017612)
Drill	MODERN SPECIES	457			CARF (ENSMLEG00000030166)	ENSMLEG00000036849	ICA1L (ENSMLEG00000039025)	ENSMLEG00000024347	ENSMLEG00000033408	BMPR2 (ENSMLEG00000006140)	NOP58 (ENSMLEG00000038485)	ENSMLEG00000034465	KIAA2012 (ENSMLEG00000030041)	ENSMLEG00000030683	FZD7 (ENSMLEG00000027282)	CDK15 (ENSMLEG00000035895) #21	ENSMLEG00000040274	ALS2 (ENSMLEG00000042400) #22	MPP4 (ENSMLEG00000013857) #23	TMEM237 (ENSMLEG00000041782) #24	C2CD6 (ENSMLEG00000043681)	STRADB (ENSMLEG00000034988)	TRAK2 (ENSMLEG00000032765)	FLACC1 (ENSMLEG00000034476)	CASP8 (ENSMLEG00000032037)	ENSMLEG00000039409	CASP10 (ENSMLEG00000035963)	CFLAR (ENSMLEG00000029692)	ENSMLEG00000039976	NDUFB3 (ENSMLEG00000022709)	HYCC2 (ENSMLEG00000036064)	ENSMLEG00000027789	ORC2 (ENSMLEG00000040373)
Olive baboon	MODERN SPECIES	1	ABI2 (ENSPANG00000023238)	CYP20A1 (ENSPANG00000002439)	NBEAL1 (ENSPANG00000000692)	ENSPANG00000008982	ENSPANG00000008983	ICA1L (ENSPANG00000017467)	FAM117B (ENSPANG00000009087)	ENSPANG00000042529	BMPR2 (ENSPANG00000006512)	NOP58 (ENSPANG00000005211)	ENSPANG00000031030	ENSPANG00000040608	KIAA2012 (ENSPANG00000025945)	FZD7 (ENSPANG00000010400)	CDK15 (ENSPANG00000011570) #21	ALS2 (ENSPANG00000022091) #22	MPP4 (ENSPANG00000006047) #23	TMEM237 (ENSPANG00000008517) #24	C2CD6 (ENSPANG00000004588)	STRADB (ENSPANG00000009089)	TRAK2 (ENSPANG00000006048)	FLACC1 (ENSPANG00000015084)	CASP8 (ENSPANG00000012882)	ENSPANG00000042566	CASP10 (ENSPANG00000018306)	CFLAR (ENSPANG00000009268)	NDUFB3 (ENSPANG00000030814)	HYCC2 (ENSPANG00000023886)	ORC2 (ENSPANG00000034347)	NIF3L1 (ENSPANG00000025493)	ENSPANG00000009683
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00940000154319.u.a.d	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i	ENSGT00880000138031.j	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228
Hominidae	ANCESTRAL SPECIES	17	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590
Orangutan	MODERN SPECIES	15	RAPH1 (ENSPPYG00000013096)	ABI2 (ENSPPYG00000013094)	CYP20A1 (ENSPPYG00000013093)	NBEAL1 (ENSPPYG00000013092)	CARF (ENSPPYG00000013090)	WDR12 (ENSPPYG00000040830)	ICA1L (ENSPPYG00000013088)	ENSPPYG00000034941	FAM117B (ENSPPYG00000037197)	BMPR2 (ENSPPYG00000013085)	NOP58 (ENSPPYG00000013084)	SUMO1 (ENSPPYG00000013083)	KIAA2012 (ENSPPYG00000013082)	FZD7 (ENSPPYG00000013080)	CDK15 (ENSPPYG00000013079) #21	ALS2 (ENSPPYG00000013078) #22	MPP4 (ENSPPYG00000013077) #23	TMEM237 (ENSPPYG00000013076) #24	ENSPPYG00000037718	C2CD6 (ENSPPYG00000013075)	STRADB (ENSPPYG00000013074)	TRAK2 (ENSPPYG00000013073)	FLACC1 (ENSPPYG00000013072)	CASP8 (ENSPPYG00000013071)	CASP10 (ENSPPYG00000013070)	CFLAR (ENSPPYG00000013068)	NDUFB3 (ENSPPYG00000013065)	HYCC2 (ENSPPYG00000029836)	ORC2 (ENSPPYG00000013064)	NIF3L1 (ENSPPYG00000013063)	ENSPPYG00000013062
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00390000015889.j	ENSGT00610000087446	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.a	ENSGT00940000154319.u.a.d	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00950000183123.g.b.b.i.a.a.b	ENSGT00390000011295.a	ENSGT00390000015228
Gorilla	MODERN SPECIES	15	ENSGGOG00000036442	WDR12 (ENSGGOG00000026073)	ICA1L (ENSGGOG00000017038)	ENSGGOG00000016194	ENSGGOG00000014813	BMPR2 (ENSGGOG00000010989)	ENSGGOG00000042085	ENSGGOG00000014545	ENSGGOG00000026439	ENSGGOG00000007480	ENSGGOG00000027043	ENSGGOG00000025256	KIAA2012 (ENSGGOG00000010791)	FZD7 (ENSGGOG00000040323)	CDK15 (ENSGGOG00000028577) #21	ALS2 (ENSGGOG00000015032) #22	MPP4 (ENSGGOG00000015025) #23	TMEM237 (ENSGGOG00000004720) #24	C2CD6 (ENSGGOG00000012199)	STRADB (ENSGGOG00000012183)	ENSGGOG00000040945	TRAK2 (ENSGGOG00000003014)	FLACC1 (ENSGGOG00000000211)	CASP8 (ENSGGOG00000000209)	CASP10 (ENSGGOG00000012288)	ENSGGOG00000042670	CFLAR (ENSGGOG00000010972)	NDUFB3 (ENSGGOG00000023537)	ENSGGOG00000022797	HYCC2 (ENSGGOG00000039554)	ORC2 (ENSGGOG00000014070)
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00390000013916	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00390000015889.j	ENSGT00610000087446	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00940000154319.u.a.d	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00950000183123.g.b.b.i.a.a.b	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590
Pan	ANCESTRAL SPECIES	12	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00390000015889.j	ENSGT00610000087446	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.a	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00950000183123.g.b.b.i.a.a.b	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590
Chimpanzee	MODERN SPECIES	15	CARF (ENSPTRG00000012824)	WDR12 (ENSPTRG00000012823)	ICA1L (ENSPTRG00000012822)	ENSPTRG00000044806	ENSPTRG00000040928	FAM117B (ENSPTRG00000012821)	BMPR2 (ENSPTRG00000029076)	ENSPTRG00000047517	NOP58 (ENSPTRG00000012818)	ENSPTRG00000012817	ENSPTRG00000049039	ENSPTRG00000050371	KIAA2012 (ENSPTRG00000012814)	FZD7 (ENSPTRG00000049803)	CDK15 (ENSPTRG00000012812) #21	ALS2 (ENSPTRG00000012811) #22	MPP4 (ENSPTRG00000012809) #23	TMEM237 (ENSPTRG00000012808) #24	C2CD6 (ENSPTRG00000012807)	STRADB (ENSPTRG00000050289)	ENSPTRG00000051730	TRAK2 (ENSPTRG00000012804)	FLACC1 (ENSPTRG00000012803)	CASP8 (ENSPTRG00000012801)	CASP10 (ENSPTRG00000012800)	CFLAR (ENSPTRG00000012798)	NDUFB3 (ENSPTRG00000012797)	ENSPTRG00000032634	HYCC2 (ENSPTRG00000012796)	ORC2 (ENSPTRG00000012795)	NIF3L1 (ENSPTRG00000012794)
Bonobo	MODERN SPECIES	15	NBEAL1 (ENSPPAG00000040934)	CARF (ENSPPAG00000042960)	ENSPPAG00000033697	ICA1L (ENSPPAG00000037623)	ENSPPAG00000027947	FAM117B (ENSPPAG00000041596)	BMPR2 (ENSPPAG00000017269)	ENSPPAG00000043823	NOP58 (ENSPPAG00000036626)	ENSPPAG00000039520	ENSPPAG00000039551	ENSPPAG00000036444	KIAA2012 (ENSPPAG00000038457)	FZD7 (ENSPPAG00000030490)	CDK15 (ENSPPAG00000027737) #21	ALS2 (ENSPPAG00000039038) #22	MPP4 (ENSPPAG00000035730) #23	TMEM237 (ENSPPAG00000030371) #24	ENSPPAG00000042646	STRADB (ENSPPAG00000030005)	ENSPPAG00000032863	TRAK2 (ENSPPAG00000035936)	FLACC1 (ENSPPAG00000012440)	CASP8 (ENSPPAG00000030711)	CASP10 (ENSPPAG00000042370)	CFLAR (ENSPPAG00000027058)	NDUFB3 (ENSPPAG00000040881)	HYCC2 (ENSPPAG00000040686)	ORC2 (ENSPPAG00000030211)	NIF3L1 (ENSPPAG00000043491)	PPIL3 (ENSPPAG00000039183)
Human	MODERN SPECIES	11	RAPH1 (ENSG00000173166)	ABI2 (ENSG00000138443)	CYP20A1 (ENSG00000119004)	NBEAL1 (ENSG00000144426)	CARF (ENSG00000138380)	WDR12 (ENSG00000138442)	ICA1L (ENSG00000163596)	FAM117B (ENSG00000138439)	ENSG00000289490	BMPR2 (ENSG00000204217)	NOP58 (ENSG00000055044)	SUMO1 (ENSG00000116030)	KIAA2012 (ENSG00000182329)	FZD7 (ENSG00000155760)	CDK15 (ENSG00000138395) #21	ALS2 (ENSG00000003393) #22	MPP4 (ENSG00000082126) #23	TMEM237 (ENSG00000155755) #24	C2CD6 (ENSG00000155754)	STRADB (ENSG00000082146)	TRAK2 (ENSG00000115993)	FLACC1 (ENSG00000155749)	CASP8 (ENSG00000064012)	CASP10 (ENSG00000003400)	CFLAR (ENSG00000003402)	NDUFB3 (ENSG00000119013)	HYCC2 (ENSG00000155744)	ORC2 (ENSG00000115942)	NIF3L1 (ENSG00000196290)	PPIL3 (ENSG00000240344)	CLK1 (ENSG00000013441)
Gibbon	MODERN SPECIES	14	ENSNLEG00000029450	NBEAL1 (ENSNLEG00000007032)	CARF (ENSNLEG00000007026)	WDR12 (ENSNLEG00000007018)	ICA1L (ENSNLEG00000007012)	ENSNLEG00000027717	ENSNLEG00000029928	ENSNLEG00000007009	BMPR2 (ENSNLEG00000007004)	ENSNLEG00000031345	NOP58 (ENSNLEG00000007000)	SUMO1 (ENSNLEG00000006997)	KIAA2012 (ENSNLEG00000006992)	FZD7 (ENSNLEG00000035997)	CDK15 (ENSNLEG00000006990) #21	ALS2 (ENSNLEG00000006980) #22	MPP4 (ENSNLEG00000006977) #23	TMEM237 (ENSNLEG00000006974) #24	ENSNLEG00000006972	ENSNLEG00000034127	STRADB (ENSNLEG00000006967)	ENSNLEG00000033546	TRAK2 (ENSNLEG00000006960)	FLACC1 (ENSNLEG00000006956)	CASP8 (ENSNLEG00000032856)	CASP10 (ENSNLEG00000006951)	ENSNLEG00000030686	CFLAR (ENSNLEG00000006947)	NDUFB3 (ENSNLEG00000006946)	HYCC2 (ENSNLEG00000006941)	ORC2 (ENSNLEG00000006938)
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00500000044939	ENSGT00390000000685.o.b.a	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00390000010308.cb.b	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00880000138031.j	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Cebidae	ANCESTRAL SPECIES	11	ENSGT00500000044939	ENSGT00390000000685.o.b.a	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00390000010308.cb.b	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00880000138031.j	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00500000044939	ENSGT00390000000685.o.b.a	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00390000010308.cb.b	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00880000138031.j	ENSGT00940000158202	ENSGT00400000022323	ENSGT00390000007552.f.w.b	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590
Capuchin	MODERN SPECIES	666										ENSCCAG00000029661	ENSCCAG00000023285	ENSCCAG00000036777	KIAA2012 (ENSCCAG00000026861)	FZD7 (ENSCCAG00000019867)	CDK15 (ENSCCAG00000035246) #21	ALS2 (ENSCCAG00000030938) #22	MPP4 (ENSCCAG00000020797) #23	TMEM237 (ENSCCAG00000026654) #24
Bolivian squirrel monkey	MODERN SPECIES	56	ABI2 (ENSSBOG00000031443)	CYP20A1 (ENSSBOG00000025384)	ENSSBOG00000030482	NBEAL1 (ENSSBOG00000032563)	CARF (ENSSBOG00000032523)	WDR12 (ENSSBOG00000015132)	ICA1L (ENSSBOG00000032973)	ENSSBOG00000016073	BMPR2 (ENSSBOG00000025318)	ENSSBOG00000029881	NOP58 (ENSSBOG00000020494)	ENSSBOG00000030624	KIAA2012 (ENSSBOG00000034494)	FZD7 (ENSSBOG00000013896)	CDK15 (ENSSBOG00000023266) #21	ALS2 (ENSSBOG00000026070) #22	MPP4 (ENSSBOG00000032446) #23	TMEM237 (ENSSBOG00000028677) #24	C2CD6 (ENSSBOG00000024027)	ENSSBOG00000022018	STRADB (ENSSBOG00000028914)	TRAK2 (ENSSBOG00000027410)	ENSSBOG00000024387	FLACC1 (ENSSBOG00000032227)	CASP8 (ENSSBOG00000027346)	ENSSBOG00000021837	CASP10 (ENSSBOG00000023212)	CFLAR (ENSSBOG00000020876)	NDUFB3 (ENSSBOG00000023814)	HYCC2 (ENSSBOG00000033197)	ENSSBOG00000025751
Marmoset	MODERN SPECIES	18	RAPH1 (ENSCJAG00000005339)	ABI2 (ENSCJAG00000005399)	CYP20A1 (ENSCJAG00000039360)	ENSCJAG00000081284	NBEAL1 (ENSCJAG00000031696)	CARF (ENSCJAG00000005224)	WDR12 (ENSCJAG00000005171)	ICA1L (ENSCJAG00000005162)	FAM117B (ENSCJAG00000047724)	BMPR2 (ENSCJAG00000005066)	NOP58 (ENSCJAG00000004985)	ENSCJAG00000047154	KIAA2012 (ENSCJAG00000004923)	FZD7 (ENSCJAG00000038346)	CDK15 (ENSCJAG00000004892) #21	ALS2 (ENSCJAG00000004769) #22	MPP4 (ENSCJAG00000004750) #23	TMEM237 (ENSCJAG00000004720) #24	C2CD6 (ENSCJAG00000004698)	STRADB (ENSCJAG00000004661)	TRAK2 (ENSCJAG00000004568)	FLACC1 (ENSCJAG00000004558)	CASP8 (ENSCJAG00000004551)	CASP10 (ENSCJAG00000004540)	ENSCJAG00000004505	NDUFB3 (ENSCJAG00000004496)	ORC2 (ENSCJAG00000004465)	NIF3L1 (ENSCJAG00000004400)	PPIL3 (ENSCJAG00000041811)	CLK1 (ENSCJAG00000004319)	BZW1 (ENSCJAG00000004267)
Mas night monkey	MODERN SPECIES	357	CYP20A1 (ENSANAG00000026608)	ENSANAG00000023562	NBEAL1 (ENSANAG00000029269)	CARF (ENSANAG00000032508)	WDR12 (ENSANAG00000030065)	ICA1L (ENSANAG00000036249)	FAM117B (ENSANAG00000032237)	ENSANAG00000029164	BMPR2 (ENSANAG00000029511)	ENSANAG00000037788	NOP58 (ENSANAG00000037044)	ENSANAG00000033069	KIAA2012 (ENSANAG00000029179)	FZD7 (ENSANAG00000017245)	CDK15 (ENSANAG00000037266) #21	ALS2 (ENSANAG00000037290) #22	MPP4 (ENSANAG00000033861) #23	TMEM237 (ENSANAG00000019897) #24	ENSANAG00000024913	STRADB (ENSANAG00000027419)	TRAK2 (ENSANAG00000026933)	ENSANAG00000020277	ENSANAG00000020470	FLACC1 (ENSANAG00000028497)	ENSANAG00000021926	CASP8 (ENSANAG00000028822)	CASP10 (ENSANAG00000018072)	CFLAR (ENSANAG00000024537)	ENSANAG00000022594	ENSANAG00000022986	ORC2 (ENSANAG00000029403)
Tarsier	MODERN SPECIES	6389																ALS2 (ENSTSYG00000008911) #22	MPP4 (ENSTSYG00000005273) #23	TMEM237 (ENSTSYG00000005228) #24	ENSTSYG00000014651
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Mouse lemur	MODERN SPECIES	30	ENSMICG00000026752	CARF (ENSMICG00000011943)	ENSMICG00000044580	ICA1L (ENSMICG00000002701)	FBXO36 (ENSMICG00000034045)	SLC16A14 (ENSMICG00000010609)	FAM117B (ENSMICG00000042296)	ENSMICG00000031997	BMPR2 (ENSMICG00000004432)	ENSMICG00000007114	ENSMICG00000003539	SUMO1 (ENSMICG00000008968)	KIAA2012 (ENSMICG00000008942)	FZD7 (ENSMICG00000037803)	CDK15 (ENSMICG00000008920) #21	ALS2 (ENSMICG00000013399) #22	MPP4 (ENSMICG00000013369) #23	TMEM237 (ENSMICG00000013335) #24	C2CD6 (ENSMICG00000034413)	ENSMICG00000032723	STRADB (ENSMICG00000013292)	ENSMICG00000013250	ENSMICG00000033274	FLACC1 (ENSMICG00000004479)	CASP8 (ENSMICG00000004468)	CASP10 (ENSMICG00000047692)	CFLAR (ENSMICG00000004452)	NDUFB3 (ENSMICG00000047803)	HYCC2 (ENSMICG00000008160)	ENSMICG00000045034	ORC2 (ENSMICG00000043343)
Lemuriformes_a	ANCESTRAL SPECIES	15	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000001413.b	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Greater bamboo lemur	MODERN SPECIES	1209										ENSPSMG00000019321	NOP58 (ENSPSMG00000019269)	SUMO1 (ENSPSMG00000019226)	KIAA2012 (ENSPSMG00000019210)	FZD7 (ENSPSMG00000019204)	CDK15 (ENSPSMG00000019177) #21	ALS2 (ENSPSMG00000019153) #22	MPP4 (ENSPSMG00000019065) #23	TMEM237 (ENSPSMG00000018963) #24	ENSPSMG00000018918	ENSPSMG00000018917	STRADB (ENSPSMG00000018902)	TRAK2 (ENSPSMG00000018832)	FLACC1 (ENSPSMG00000018772)	CASP8 (ENSPSMG00000018768)	CASP10 (ENSPSMG00000018750)	CFLAR (ENSPSMG00000018734)	NDUFB3 (ENSPSMG00000018710)	HYCC2 (ENSPSMG00000018701)	ORC2 (ENSPSMG00000018686)	NIF3L1 (ENSPSMG00000018669)	ENSPSMG00000018655
Coquerels sifaka	MODERN SPECIES	94	NBEAL1 (ENSPCOG00000017923)	CARF (ENSPCOG00000016952)	WDR12 (ENSPCOG00000020334)	ICA1L (ENSPCOG00000027153)	FAM117B (ENSPCOG00000017335)	ENSPCOG00000025609	ENSPCOG00000023341	BMPR2 (ENSPCOG00000019341)	ENSPCOG00000017531	ENSPCOG00000024395	ENSPCOG00000006096	SUMO1 (ENSPCOG00000006748)	KIAA2012 (ENSPCOG00000016002)	FZD7 (ENSPCOG00000013463)	CDK15 (ENSPCOG00000018541) #21	ALS2 (ENSPCOG00000026147) #22	MPP4 (ENSPCOG00000023532) #23	TMEM237 (ENSPCOG00000006321) #24	ENSPCOG00000019752	ENSPCOG00000015949	STRADB (ENSPCOG00000017505)	TRAK2 (ENSPCOG00000023263)	FLACC1 (ENSPCOG00000023669)	CASP8 (ENSPCOG00000024032)	CASP10 (ENSPCOG00000021615)	CFLAR (ENSPCOG00000011330)	NDUFB3 (ENSPCOG00000020529)	HYCC2 (ENSPCOG00000014611)	ORC2 (ENSPCOG00000021783)	NIF3L1 (ENSPCOG00000018022)	PPIL3 (ENSPCOG00000028235)
Bushbaby	MODERN SPECIES	128	ENSOGAG00000033059	CYP20A1 (ENSOGAG00000015164)	NBEAL1 (ENSOGAG00000015089)	CARF (ENSOGAG00000032187)	WDR12 (ENSOGAG00000006573)	ICA1L (ENSOGAG00000001500)	FAM117B (ENSOGAG00000001497)	BMPR2 (ENSOGAG00000007765)	NOP58 (ENSOGAG00000003906)	ENSOGAG00000030345	ENSOGAG00000008508	ENSOGAG00000007416	FZD7 (ENSOGAG00000032455)	ENSOGAG00000032427	CDK15 (ENSOGAG00000010775) #21	ALS2 (ENSOGAG00000010767) #22	MPP4 (ENSOGAG00000010759) #23	TMEM237 (ENSOGAG00000010754) #24	ENSOGAG00000028424	STRADB (ENSOGAG00000010744)	TRAK2 (ENSOGAG00000010739)	FLACC1 (ENSOGAG00000010736)	CASP8 (ENSOGAG00000010735)	CASP10 (ENSOGAG00000010732)	CFLAR (ENSOGAG00000011604)	NDUFB3 (ENSOGAG00000013054)	HYCC2 (ENSOGAG00000012336)	ORC2 (ENSOGAG00000012329)	NIF3L1 (ENSOGAG00000025311)	PPIL3 (ENSOGAG00000007087)	CLK1 (ENSOGAG00000012328)
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Tree shrew	MODERN SPECIES	644																ALS2 (ENSTBEG00000010170) #22	MPP4 (ENSTBEG00000009976) #23	TMEM237 (ENSTBEG00000009845) #24	ENSTBEG00000017736	STRADB (ENSTBEG00000017709)	TRAK2 (ENSTBEG00000017609)
Glires	ANCESTRAL SPECIES	14	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Lagomorpha	ANCESTRAL SPECIES	13	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041.nb	ENSGT00940000155041.ob	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Rabbit	MODERN SPECIES	18	CYP20A1 (ENSOCUG00000008054)	NBEAL1 (ENSOCUG00000008716)	ENSOCUG00000027134	CARF (ENSOCUG00000005335)	WDR12 (ENSOCUG00000002961)	ENSOCUG00000010497	ENSOCUG00000030693	ENSOCUG00000006347	BMPR2 (ENSOCUG00000001971)	NOP58 (ENSOCUG00000003631)	ENSOCUG00000037823	KIAA2012 (ENSOCUG00000003626)	ENSOCUG00000016611	FZD7 (ENSOCUG00000011457)	CDK15 (ENSOCUG00000007737) #21	ALS2 (ENSOCUG00000012488) #22	MPP4 (ENSOCUG00000012470) #23	TMEM237 (ENSOCUG00000012462) #24	ENSOCUG00000035542	ENSOCUG00000027085	STRADB (ENSOCUG00000022279)	TRAK2 (ENSOCUG00000000156)	FLACC1 (ENSOCUG00000007135)	ENSOCUG00000007128	ENSOCUG00000036865	ENSOCUG00000024651	ENSOCUG00000002567	CASP10 (ENSOCUG00000004510)	CFLAR (ENSOCUG00000011072)	NDUFB3 (ENSOCUG00000011069)	ENSOCUG00000016854
Pika	MODERN SPECIES	1890															CDK15 (ENSOPRG00000015579) #21	ALS2 (ENSOPRG00000015529) #22	MPP4 (ENSOPRG00000015500) #23	TMEM237 (ENSOPRG00000015474) #24	ENSOPRG00000015444	STRADB (ENSOPRG00000015422)	TRAK2 (ENSOPRG00000015395)	ENSOPRG00000015371	CASP8 (ENSOPRG00000015347)
Rodentia	ANCESTRAL SPECIES	14	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Hystricomorpha	ANCESTRAL SPECIES	20																ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Hystricomorpha_a	ANCESTRAL SPECIES	17																ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Hystricomorpha_b	ANCESTRAL SPECIES	24																ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b
Long-tailed chinchilla	MODERN SPECIES	110																ALS2 (ENSCLAG00000012306) #22	MPP4 (ENSCLAG00000013668) #23	TMEM237 (ENSCLAG00000011765) #24	STRADB (ENSCLAG00000012985)	TRAK2 (ENSCLAG00000013378)	FLACC1 (ENSCLAG00000013356)	CASP8 (ENSCLAG00000012773)	CFLAR (ENSCLAG00000013322)	NDUFB3 (ENSCLAG00000012349)	HYCC2 (ENSCLAG00000011177)	ORC2 (ENSCLAG00000013209)	NIF3L1 (ENSCLAG00000013524)	PPIL3 (ENSCLAG00000014050)	CLK1 (ENSCLAG00000011455)	BZW1 (ENSCLAG00000012079)	ENSCLAG00000011199
Degu	MODERN SPECIES	66													ENSODEG00000010587	ENSODEG00000019906	ENSODEG00000008122	ALS2 (ENSODEG00000007275) #22	MPP4 (ENSODEG00000009252) #23	TMEM237 (ENSODEG00000009685) #24	STRADB (ENSODEG00000010540)	TRAK2 (ENSODEG00000007402)	CASP8 (ENSODEG00000009065)	CFLAR (ENSODEG00000009559)	NDUFB3 (ENSODEG00000010233)	HYCC2 (ENSODEG00000008316)	ENSODEG00000007860	ORC2 (ENSODEG00000008853)	NIF3L1 (ENSODEG00000008894)	PPIL3 (ENSODEG00000007592)	CLK1 (ENSODEG00000009021)	ENSODEG00000019563	ENSODEG00000008411
Guinea pig	MODERN SPECIES	104																ALS2 (ENSCPOG00000014263) #22	MPP4 (ENSCPOG00000014262) #23	TMEM237 (ENSCPOG00000040314) #24	STRADB (ENSCPOG00000013028)	TRAK2 (ENSCPOG00000007002)	ENSCPOG00000024803	CASP8 (ENSCPOG00000009618)	CASP10 (ENSCPOG00000024282)	CFLAR (ENSCPOG00000000098)	NDUFB3 (ENSCPOG00000038261)	HYCC2 (ENSCPOG00000010108)	ORC2 (ENSCPOG00000004552)	NIF3L1 (ENSCPOG00000008572)	PPIL3 (ENSCPOG00000008570)	CLK1 (ENSCPOG00000027067)	ENSCPOG00000010449
Naked mole-rat female	MODERN SPECIES	22	ENSHGLG00000043283	PLCL1 (ENSHGLG00000015970)	BOLL (ENSHGLG00000017562)	MARS2 (ENSHGLG00000049320)	RFTN2 (ENSHGLG00000017636)	MOB4 (ENSHGLG00000050196)	ENSHGLG00000042669	HSPD1 (ENSHGLG00000007927)	ENSHGLG00000038699	ENSHGLG00000008285	ANKRD44 (ENSHGLG00000008625)	ENSHGLG00000049153	ENSHGLG00000040344	ENSHGLG00000008965	ENSHGLG00000042696	ENSHGLG00000002790 #22	ENSHGLG00000003940 #24	ENSHGLG00000034754	ENSHGLG00000004703	ENSHGLG00000004915	ENSHGLG00000037940	FLACC1 (ENSHGLG00000007412)	ENSHGLG00000040561	ENSHGLG00000039700	ENSHGLG00000032663	ASDURF (ENSHGLG00000029891)	SLC40A1 (ENSHGLG00000008999)	WDR75 (ENSHGLG00000011577)	ENSHGLG00000017600	COL5A2 (ENSHGLG00000001701)	COL3A1 (ENSHGLG00000001404)
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Marmotini	ANCESTRAL SPECIES	2	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00390000000560.m.a.b	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Marmotini_b	ANCESTRAL SPECIES	103	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00390000000560.m.a.b	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Arctic ground squirrel	MODERN SPECIES	317			NBEAL1 (ENSUPAG00010013702)	CARF (ENSUPAG00010013873)	WDR12 (ENSUPAG00010013907)	ICA1L (ENSUPAG00010013914)	FAM117B (ENSUPAG00010013968)	BMPR2 (ENSUPAG00010013984)	ENSUPAG00010014004	ENSUPAG00010014007	NOP58 (ENSUPAG00010014015)	SUMO1 (ENSUPAG00010014098)	KIAA2012 (ENSUPAG00010014115)	FZD7 (ENSUPAG00010014150)	CDK15 (ENSUPAG00010014153) #21	ALS2 (ENSUPAG00010014184) #22	MPP4 (ENSUPAG00010014266) #23	TMEM237 (ENSUPAG00010014479) #24	ENSUPAG00010014524	STRADB (ENSUPAG00010014591)	TRAK2 (ENSUPAG00010014606)	FLACC1 (ENSUPAG00010014658)	CASP8 (ENSUPAG00010014705)	CASP10 (ENSUPAG00010014765)	CFLAR (ENSUPAG00010014940)	NDUFB3 (ENSUPAG00010014966)	HYCC2 (ENSUPAG00010014985)	ORC2 (ENSUPAG00010015014)	NIF3L1 (ENSUPAG00010015151)	PPIL3 (ENSUPAG00010015181)	CLK1 (ENSUPAG00010015196)
Squirrel	MODERN SPECIES	326					CYP20A1 (ENSSTOG00000013781)	NBEAL1 (ENSSTOG00000021783)	WDR12 (ENSSTOG00000001578)	CARF (ENSSTOG00000001585)	ICA1L (ENSSTOG00000009931)	FAM117B (ENSSTOG00000013447)	BMPR2 (ENSSTOG00000002359)	NOP58 (ENSSTOG00000006155)	Sumo1 (ENSSTOG00000025405)	FZD7 (ENSSTOG00000020705)	CDK15 (ENSSTOG00000016128) #21	ALS2 (ENSSTOG00000016119) #22	ENSSTOG00000029531	MPP4 (ENSSTOG00000025322) #23	TMEM237 (ENSSTOG00000025175) #24	STRADB (ENSSTOG00000021132)	TRAK2 (ENSSTOG00000002930)	FLACC1 (ENSSTOG00000006296)	CASP8 (ENSSTOG00000011342)	ENSSTOG00000022094	CASP10 (ENSSTOG00000002364)	CFLAR (ENSSTOG00000009642)	NDUFB3 (ENSSTOG00000009635)	HYCC2 (ENSSTOG00000023641)	ORC2 (ENSSTOG00000019442)	NIF3L1 (ENSSTOG00000030641)	PPIL3 (ENSSTOG00000028255)
Alpin marmot	MODERN SPECIES	8	CYP20A1 (ENSMMMG00000013312)	NBEAL1 (ENSMMMG00000013229)	CARF (ENSMMMG00000013161)	WDR12 (ENSMMMG00000013110)	ICA1L (ENSMMMG00000013064)	ENSMMMG00000013060	ENSMMMG00000013051	ENSMMMG00000013017	BMPR2 (ENSMMMG00000012999)	ENSMMMG00000012991	ENSMMMG00000012982	NOP58 (ENSMMMG00000012922)	SUMO1 (ENSMMMG00000012871)	KIAA2012 (ENSMMMG00000012837)	CDK15 (ENSMMMG00000012752) #21	ALS2 (ENSMMMG00000012683) #22	ENSMMMG00000012669	MPP4 (ENSMMMG00000012482) #23	TMEM237 (ENSMMMG00000012468) #24	ENSMMMG00000012437	STRADB (ENSMMMG00000012410)	TRAK2 (ENSMMMG00000012358)	FLACC1 (ENSMMMG00000012333)	CASP8 (ENSMMMG00000012315)	CASP10 (ENSMMMG00000012307)	CFLAR (ENSMMMG00000012269)	ENSMMMG00000012253	HYCC2 (ENSMMMG00000012182)	ORC2 (ENSMMMG00000012136)	NIF3L1 (ENSMMMG00000012077)	PPIL3 (ENSMMMG00000012069)
Eurasian red squirrel	MODERN SPECIES	12	ABI2 (ENSSVLG00005001071)	CYP20A1 (ENSSVLG00005000970)	NBEAL1 (ENSSVLG00005000853)	ENSSVLG00005000784	ENSSVLG00005000686	WDR12 (ENSSVLG00005000598)	ENSSVLG00005000579	ENSSVLG00005000554	ENSSVLG00005000534	BMPR2 (ENSSVLG00005000484)	ENSSVLG00005000362	ENSSVLG00005000315	KIAA2012 (ENSSVLG00005000255)	FZD7 (ENSSVLG00005006721)	CDK15 (ENSSVLG00005006442) #21	ALS2 (ENSSVLG00005006352) #22	MPP4 (ENSSVLG00005005386) #23	TMEM237 (ENSSVLG00005004927) #24	ENSSVLG00005004791	STRADB (ENSSVLG00005004739)	ENSSVLG00005004684	FLACC1 (ENSSVLG00005004644)	ENSSVLG00005004626	CASP8 (ENSSVLG00005004545)	ENSSVLG00005004469	ENSSVLG00005004452	CASP10 (ENSSVLG00005004333)	ENSSVLG00005004275	CFLAR (ENSSVLG00005004210)	NDUFB3 (ENSSVLG00005004178)	HYCC2 (ENSSVLG00005004160)
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Kangaroo rat	MODERN SPECIES	320	Ctla4 (ENSDORG00000008556)	Cd28 (ENSDORG00000013428)	ENSDORG00000007525	Abi2 (ENSDORG00000028252)	ENSDORG00000028647	Cyp20a1 (ENSDORG00000015715)	Nbeal1 (ENSDORG00000015714)	Carf (ENSDORG00000006614)	Wdr12 (ENSDORG00000015294)	Ica1l (ENSDORG00000015292)	ENSDORG00000015288	Bmpr2 (ENSDORG00000009209)	ENSDORG00000025164	Fzd7 (ENSDORG00000014396)	Cdk15 (ENSDORG00000015415) #21	Als2 (ENSDORG00000001846) #22	Mpp4 (ENSDORG00000001842) #23	Tmem237 (ENSDORG00000001840) #24	Stradb (ENSDORG00000001838)	Trak2 (ENSDORG00000001835)	ENSDORG00000025646	ENSDORG00000024018	Hycc2 (ENSDORG00000029531)	Orc2 (ENSDORG00000007391)	Nif3l1 (ENSDORG00000007390)	Ppil3 (ENSDORG00000007389)	Clk1 (ENSDORG00000007388)	Bzw1 (ENSDORG00000029865)	Aox2 (ENSDORG00000026718)	Aox4 (ENSDORG00000026668)	Aox3 (ENSDORG00000025305)
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Lesser Egyptian jerboa	MODERN SPECIES	52	Cd28 (ENSJJAG00000001227)	ENSJJAG00000023840	Abi2 (ENSJJAG00000006918)	Cyp20a1 (ENSJJAG00000007155)	Nbeal1 (ENSJJAG00000023210)	Carf (ENSJJAG00000014072)	ENSJJAG00000000724	Ica1l (ENSJJAG00000022732)	Fam117b (ENSJJAG00000019496)	Bmpr2 (ENSJJAG00000015151)	Nop58 (ENSJJAG00000018213)	ENSJJAG00000022745	Gm973 (ENSJJAG00000024266)	Fzd7 (ENSJJAG00000011395)	Cdk15 (ENSJJAG00000013533) #21	Als2 (ENSJJAG00000017902) #22	Mpp4 (ENSJJAG00000000487) #23	Tmem237 (ENSJJAG00000021833) #24	Stradb (ENSJJAG00000021748)	Trak2 (ENSJJAG00000019852)	Flacc1 (ENSJJAG00000000467)	Casp8 (ENSJJAG00000014714)	Cflar (ENSJJAG00000024196)	Hycc2 (ENSJJAG00000022468)	ENSJJAG00000010907	Orc2 (ENSJJAG00000011615)	Nif3l1 (ENSJJAG00000012006)	ENSJJAG00000013473	Clk1 (ENSJJAG00000024354)	Bzw1 (ENSJJAG00000022065)	Aox2 (ENSJJAG00000011668)
Muroidea	ANCESTRAL SPECIES	20	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	362																Als2 (ENSNGAG00000014693) #22	Tmem237 (ENSNGAG00000012637) #24
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Murinae	ANCESTRAL SPECIES	9	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316.k	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Mus	ANCESTRAL SPECIES	5	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316.k	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b
Mus_A	ANCESTRAL SPECIES	5	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316.k	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b
Mus_B	ANCESTRAL SPECIES	7	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089.l	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316.k	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b.p	ENSGT00950000183114.a.b.b.f.a.b
Mus_C	ANCESTRAL SPECIES	1	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089.l	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316.k	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b.p	ENSGT00950000183114.a.b.b.f.a.b
Steppe mouse	MODERN SPECIES	44	Raph1 (ENSMSIG00000010756)	ENSMSIG00000010702	Cyp20a1 (ENSMSIG00000010618)	Nbeal1 (ENSMSIG00000010304)	ENSMSIG00000010287	Carf (ENSMSIG00000010210)	Wdr12 (ENSMSIG00000010103)	Ica1l (ENSMSIG00000010027)	Fam117b (ENSMSIG00000010018)	Bmpr2 (ENSMSIG00000009989)	Nop58 (ENSMSIG00000009865)	ENSMSIG00000009835	Gm973 (ENSMSIG00000009601)	Fzd7 (ENSMSIG00000009593)	Cdk15 (ENSMSIG00000009531) #21	Als2 (ENSMSIG00000009450) #22	Mpp4 (ENSMSIG00000008670) #23	Tmem237 (ENSMSIG00000008413) #24	C2cd6 (ENSMSIG00000008310)	Stradb (ENSMSIG00000008262)	Trak2 (ENSMSIG00000008206)
spretus	MODERN SPECIES		Cd28 (MGP_SPRETEiJ_G0014998)	Raph1 (MGP_SPRETEiJ_G0014997)	Abi2 (MGP_SPRETEiJ_G0014996)	Cyp20a1 (MGP_SPRETEiJ_G0014995)	Nbeal1 (MGP_SPRETEiJ_G0014994)	Carf (MGP_SPRETEiJ_G0014993)	Wdr12 (MGP_SPRETEiJ_G0014992)	Ica1l (MGP_SPRETEiJ_G0014991)	MGP_SPRETEiJ_G0014990	Bmpr2 (MGP_SPRETEiJ_G0014989)	Nop58 (MGP_SPRETEiJ_G0014988)	Sumo1 (MGP_SPRETEiJ_G0014987)	Gm973 (MGP_SPRETEiJ_G0014986)	Fzd7 (MGP_SPRETEiJ_G0014985)	Cdk15 (MGP_SPRETEiJ_G0014984) #21	Als2 (MGP_SPRETEiJ_G0014983) #22	Mpp4 (MGP_SPRETEiJ_G0014982) #23	Tmem237 (MGP_SPRETEiJ_G0014981) #24	MGP_SPRETEiJ_G0014980	Stradb (MGP_SPRETEiJ_G0014979)	Trak2 (MGP_SPRETEiJ_G0014978)	Casp8 (MGP_SPRETEiJ_G0014976)	Cflar (MGP_SPRETEiJ_G0014975)	Ndufb3 (MGP_SPRETEiJ_G0014974)	Hycc2 (MGP_SPRETEiJ_G0014973)	Orc2 (MGP_SPRETEiJ_G0014972)	Nif3l1 (MGP_SPRETEiJ_G0014971)	Ppil3 (MGP_SPRETEiJ_G0014970)	Clk1 (MGP_SPRETEiJ_G0014969)	Bzw1 (MGP_SPRETEiJ_G0014968)	Aox2 (MGP_SPRETEiJ_G0014967)
Mouse	MODERN SPECIES		Cd28 (ENSMUSG00000026012)	Raph1 (ENSMUSG00000026014)	Abi2 (ENSMUSG00000026782)	Cyp20a1 (ENSMUSG00000049439)	Nbeal1 (ENSMUSG00000073664)	Carf (ENSMUSG00000026017)	Wdr12 (ENSMUSG00000026019)	Ica1l (ENSMUSG00000026018)	Fam117b (ENSMUSG00000041040)	Bmpr2 (ENSMUSG00000067336)	Nop58 (ENSMUSG00000026020)	Sumo1 (ENSMUSG00000026021)	Gm973 (ENSMUSG00000047361)	Fzd7 (ENSMUSG00000041075)	Cdk15 (ENSMUSG00000026023) #21	Als2 (ENSMUSG00000026024) #22	Mpp4 (ENSMUSG00000079550) #23	Tmem237 (ENSMUSG00000038079) #24	C2cd6 (ENSMUSG00000072295)	Stradb (ENSMUSG00000026027)	Trak2 (ENSMUSG00000026028)	Casp8 (ENSMUSG00000026029)	Cflar (ENSMUSG00000026031)	Flacc1 (ENSMUSG00000047528)	Ndufb3 (ENSMUSG00000026032)	Hycc2 (ENSMUSG00000038174)	Orc2 (ENSMUSG00000026037)	Nif3l1 (ENSMUSG00000026036)	Ppil3 (ENSMUSG00000026035)	Clk1 (ENSMUSG00000026034)	Bzw1 (ENSMUSG00000051223)
Ryukyu mouse	MODERN SPECIES		Cd28 (MGP_CAROLIEiJ_G0014191)	Raph1 (MGP_CAROLIEiJ_G0014190)	Abi2 (MGP_CAROLIEiJ_G0014189)	Cyp20a1 (MGP_CAROLIEiJ_G0014188)	Nbeal1 (MGP_CAROLIEiJ_G0014187)	Carf (MGP_CAROLIEiJ_G0014186)	MGP_CAROLIEiJ_G0014185	MGP_CAROLIEiJ_G0014184	Fam117b (MGP_CAROLIEiJ_G0014183)	Bmpr2 (MGP_CAROLIEiJ_G0014182)	Nop58 (MGP_CAROLIEiJ_G0014181)	Sumo1 (MGP_CAROLIEiJ_G0014180)	Gm973 (MGP_CAROLIEiJ_G0014179)	Fzd7 (MGP_CAROLIEiJ_G0014178)	Cdk15 (MGP_CAROLIEiJ_G0014177) #21	Als2 (MGP_CAROLIEiJ_G0014176) #22	Mpp4 (MGP_CAROLIEiJ_G0014175) #23	Tmem237 (MGP_CAROLIEiJ_G0014174) #24	MGP_CAROLIEiJ_G0014173	Stradb (MGP_CAROLIEiJ_G0014172)	Trak2 (MGP_CAROLIEiJ_G0014171)	Casp8 (MGP_CAROLIEiJ_G0014170)	Cflar (MGP_CAROLIEiJ_G0014169)	Ndufb3 (MGP_CAROLIEiJ_G0014168)	Hycc2 (MGP_CAROLIEiJ_G0014167)	Orc2 (MGP_CAROLIEiJ_G0014166)	Nif3l1 (MGP_CAROLIEiJ_G0014165)	Ppil3 (MGP_CAROLIEiJ_G0014164)	Clk1 (MGP_CAROLIEiJ_G0014163)	Bzw1 (MGP_CAROLIEiJ_G0014162)	Aox2 (MGP_CAROLIEiJ_G0014161)
Shrew mouse	MODERN SPECIES	18	Cd28 (MGP_PahariEiJ_G0027429)	Raph1 (MGP_PahariEiJ_G0027428)	Abi2 (MGP_PahariEiJ_G0027427)	Cyp20a1 (MGP_PahariEiJ_G0027426)	MGP_PahariEiJ_G0027425	Carf (MGP_PahariEiJ_G0027424)	MGP_PahariEiJ_G0027423	MGP_PahariEiJ_G0027422	Fam117b (MGP_PahariEiJ_G0027421)	Bmpr2 (MGP_PahariEiJ_G0027420)	Nop58 (MGP_PahariEiJ_G0027419)	MGP_PahariEiJ_G0027418	Gm973 (MGP_PahariEiJ_G0027417)	Fzd7 (MGP_PahariEiJ_G0027416)	Cdk15 (MGP_PahariEiJ_G0027415) #21	Als2 (MGP_PahariEiJ_G0027414) #22	Mpp4 (MGP_PahariEiJ_G0027413) #23	Tmem237 (MGP_PahariEiJ_G0027412) #24	MGP_PahariEiJ_G0027411	Stradb (MGP_PahariEiJ_G0027410)	Trak2 (MGP_PahariEiJ_G0027409)	Casp8 (MGP_PahariEiJ_G0027408)	Cflar (MGP_PahariEiJ_G0027407)	Ndufb3 (MGP_PahariEiJ_G0027406)	Hycc2 (MGP_PahariEiJ_G0027405)	Orc2 (MGP_PahariEiJ_G0027404)	Nif3l1 (MGP_PahariEiJ_G0027403)	Ppil3 (MGP_PahariEiJ_G0027402)	Clk1 (MGP_PahariEiJ_G0027401)	Bzw1 (MGP_PahariEiJ_G0027400)	Aox4 (MGP_PahariEiJ_G0027399)
Rat	MODERN SPECIES	19	Cyp20a1 (ENSRNOG00000017631)	Nbeal1 (ENSRNOG00000021525)	Carf (ENSRNOG00000017491)	Wdr12 (ENSRNOG00000017340)	Ica1l (ENSRNOG00000017258)	Fam117b (ENSRNOG00000022066)	LOC301444 (ENSRNOG00000019107)	ENSRNOG00000066953	Bmpr2 (ENSRNOG00000022196)	Nop58 (ENSRNOG00000016486)	Sumo1 (ENSRNOG00000016133)	RGD1562029 (ENSRNOG00000022723)	Fzd7 (ENSRNOG00000016119)	Cdk15 (ENSRNOG00000022899) #21	AABR07067814.1 (ENSRNOG00000032289)	Als2 (ENSRNOG00000023280) #22	LOC120094797 (ENSRNOG00000032860)	Mpp4 (ENSRNOG00000010486) #23	Tmem237 (ENSRNOG00000024085) #24	C2cd6 (ENSRNOG00000012637)	Stradb (ENSRNOG00000010728)	Trak2 (ENSRNOG00000010881)	Flacc1 (ENSRNOG00000024917)	Casp8 (ENSRNOG00000012331)	Cflar (ENSRNOG00000012473)	Ndufb3 (ENSRNOG00000011825)	Hycc2 (ENSRNOG00000025079)	Orc2 (ENSRNOG00000012558)	Nif3l1 (ENSRNOG00000013446)	Ppil3 (ENSRNOG00000013636)	Clk1 (ENSRNOG00000025768)
Cricetidae	ANCESTRAL SPECIES	19	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390.d	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Chinese hamster chok1gshd	MODERN SPECIES	1	Raph1 (ENSCGRG00001019075)	Abi2 (ENSCGRG00001017572)	Cyp20a1 (ENSCGRG00001018508)	Nbeal1 (ENSCGRG00001018313)	Carf (ENSCGRG00001016848)	WDR12 (ENSCGRG00001016494)	Ica1l (ENSCGRG00001018928)	Fam117b (ENSCGRG00001020456)	Bmpr2 (ENSCGRG00001020694)	ENSCGRG00001009737	Nop58 (ENSCGRG00001017869)	ENSCGRG00001017267	Gm973 (ENSCGRG00001017041)	Fzd7 (ENSCGRG00001010812)	Cdk15 (ENSCGRG00001018439) #21	Als2 (ENSCGRG00001020892) #22	Mpp4 (ENSCGRG00001017399) #23	Tmem237 (ENSCGRG00001016616) #24	ENSCGRG00001018260	Stradb (ENSCGRG00001016031)	Trak2 (ENSCGRG00001017078)	Flacc1 (ENSCGRG00001018682)	Casp8 (ENSCGRG00001020998)	Cflar (ENSCGRG00001016122)	Ndufb3 (ENSCGRG00001023485)	Hycc2 (ENSCGRG00001015587)	Orc2 (ENSCGRG00001016911)	ENSCGRG00001018137	Ppil3 (ENSCGRG00001021470)	Clk1 (ENSCGRG00001018410)	Bzw1 (ENSCGRG00001017178)
Golden Hamster	MODERN SPECIES	640	ENSMAUG00000008616	Abi2 (ENSMAUG00000016724)	ENSMAUG00000007020	ENSMAUG00000001805	ENSMAUG00000007926	Carf (ENSMAUG00000009693)	Wdr12 (ENSMAUG00000001279)	Ica1l (ENSMAUG00000013926)	Fam117b (ENSMAUG00000017770)	Bmpr2 (ENSMAUG00000009115)	Nop58 (ENSMAUG00000009734)	Sumo1 (ENSMAUG00000011639)	ENSMAUG00000001003	Fzd7 (ENSMAUG00000010411)	Cdk15 (ENSMAUG00000017599) #21	Als2 (ENSMAUG00000013493) #22	Mpp4 (ENSMAUG00000006352) #23	Tmem237 (ENSMAUG00000022020) #24	ENSMAUG00000021781	ENSMAUG00000003249	Trak2 (ENSMAUG00000001208)	Flacc1 (ENSMAUG00000018077)	Casp8 (ENSMAUG00000018476)	ENSMAUG00000008355	ENSMAUG00000017788	ENSMAUG00000019942	Ndufb3 (ENSMAUG00000017559)	Hycc2 (ENSMAUG00000020858)	Orc2 (ENSMAUG00000019370)	Nif3l1 (ENSMAUG00000019604)	Ppil3 (ENSMAUG00000020492)
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Northern American deer mouse	MODERN SPECIES	4	Abi2 (ENSPEMG00000020443)	Cyp20a1 (ENSPEMG00000023627)	Nbeal1 (ENSPEMG00000029402)	ENSPEMG00000028509	Carf (ENSPEMG00000020983)	Wdr12 (ENSPEMG00000022189)	Ica1l (ENSPEMG00000021278)	ENSPEMG00000024187	Fam117b (ENSPEMG00000011700)	Bmpr2 (ENSPEMG00000022646)	ENSPEMG00000021263	Sumo1 (ENSPEMG00000016027)	Gm973 (ENSPEMG00000022698)	Fzd7 (ENSPEMG00000008425)	Cdk15 (ENSPEMG00000021418) #21	Als2 (ENSPEMG00000010475) #22	Mpp4 (ENSPEMG00000021808) #23	Tmem237 (ENSPEMG00000022850) #24	ENSPEMG00000022643	Stradb (ENSPEMG00000023067)	Trak2 (ENSPEMG00000016894)	Flacc1 (ENSPEMG00000023426)	Casp8 (ENSPEMG00000021544)	Cflar (ENSPEMG00000022446)	ENSPEMG00000031091	Ndufb3 (ENSPEMG00000018280)	Hycc2 (ENSPEMG00000014604)	Orc2 (ENSPEMG00000010035)	Nif3l1 (ENSPEMG00000023040)	Ppil3 (ENSPEMG00000011585)	Clk1 (ENSPEMG00000022508)
Prairie vole	MODERN SPECIES	91						Carf (ENSMOCG00000002732)	Wdr12 (ENSMOCG00000020905)	Ica1l (ENSMOCG00000017484)	Fam117b (ENSMOCG00000007027)	Bmpr2 (ENSMOCG00000004709)	Nop58 (ENSMOCG00000007756)	ENSMOCG00000000233	Gm973 (ENSMOCG00000001667)	Fzd7 (ENSMOCG00000006556)	Cdk15 (ENSMOCG00000007901) #21	ENSMOCG00000014925 #22	Mpp4 (ENSMOCG00000009328) #23	Tmem237 (ENSMOCG00000000108) #24	ENSMOCG00000000428	Stradb (ENSMOCG00000018130)	Trak2 (ENSMOCG00000020133)	Flacc1 (ENSMOCG00000015479)	Casp8 (ENSMOCG00000001017)	ENSMOCG00000019249	Hycc2 (ENSMOCG00000012367)	Orc2 (ENSMOCG00000016158)	Nif3l1 (ENSMOCG00000012327)	ENSMOCG00000013096	ENSMOCG00000005608	Bzw1 (ENSMOCG00000008375)	Aox2 (ENSMOCG00000018237)
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT01090000263468	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Eulipotyphla	ANCESTRAL SPECIES	422															ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23
Common shrew	MODERN SPECIES	7102															CDK15 (ENSSARG00000008198) #21	ALS2 (ENSSARG00000008172) #22	MPP4 (ENSSARG00000008142) #23
Hedgehog	MODERN SPECIES	8989																ALS2 (ENSEEUG00000011557) #22	MPP4 (ENSEEUG00000011431) #23
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT01090000263468	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00940000156552	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Suina	ANCESTRAL SPECIES	3	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.bb	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Chacoan peccary	MODERN SPECIES	91	CD28 (ENSCWAG00000020352)	RAPH1 (ENSCWAG00000018090)	ABI2 (ENSCWAG00000017671)	CYP20A1 (ENSCWAG00000017608)	NBEAL1 (ENSCWAG00000017563)	CARF (ENSCWAG00000017264)	WDR12 (ENSCWAG00000017209)	ICA1L (ENSCWAG00000017108)	FAM117B (ENSCWAG00000017046)	BMPR2 (ENSCWAG00000016944)	NOP58 (ENSCWAG00000016884)	SUMO1 (ENSCWAG00000016775)	KIAA2012 (ENSCWAG00000016603)	FZD7 (ENSCWAG00000016583)	CDK15 (ENSCWAG00000016217) #21	ALS2 (ENSCWAG00000016152) #22	MPP4 (ENSCWAG00000011738) #23	TMEM237 (ENSCWAG00000011481) #24	ENSCWAG00000011342	STRADB (ENSCWAG00000011261)	TRAK2 (ENSCWAG00000011203)	FLACC1 (ENSCWAG00000011076)	CASP8 (ENSCWAG00000010971)	ENSCWAG00000010876	CFLAR (ENSCWAG00000010775)	NDUFB3 (ENSCWAG00000010743)	HYCC2 (ENSCWAG00000010663)	ORC2 (ENSCWAG00000010595)	NIF3L1 (ENSCWAG00000010511)	PPIL3 (ENSCWAG00000010443)	CLK1 (ENSCWAG00000010341)
Pig	MODERN SPECIES	6	ENSSSCG00000016119	ABI2 (ENSSSCG00000034630)	CYP20A1 (ENSSSCG00000055761)	NBEAL1 (ENSSSCG00000016118)	CARF (ENSSSCG00000016117)	WDR12 (ENSSSCG00000016116)	ICA1L (ENSSSCG00000016115)	ENSSSCG00000043400	FAM117B (ENSSSCG00000016114)	BMPR2 (ENSSSCG00000016113)	NOP58 (ENSSSCG00000022225)	SUMO1 (ENSSSCG00000035842)	KIAA2012 (ENSSSCG00000016110)	FZD7 (ENSSSCG00000016111)	CDK15 (ENSSSCG00000022296) #21	ALS2 (ENSSSCG00000016109) #22	MPP4 (ENSSSCG00000026184) #23	TMEM237 (ENSSSCG00000035161) #24	ENSSSCG00000016107	STRADB (ENSSSCG00000031271)	TRAK2 (ENSSSCG00000016104)	FLACC1 (ENSSSCG00000016105)	CASP8 (ENSSSCG00000028157)	CASP10 (ENSSSCG00000026940)	CFLAR (ENSSSCG00000016101)	ENSSSCG00000016100	HYCC2 (ENSSSCG00000036339)	ORC2 (ENSSSCG00000016098)	NIF3L1 (ENSSSCG00000039654)	PPIL3 (ENSSSCG00000016096)	CLK1 (ENSSSCG00000016095)
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00940000156552	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00940000156552	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Cetacea	ANCESTRAL SPECIES	14	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00940000159152.d.d	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00940000159152.d.d	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00940000159152.d.d	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000168691.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00940000153311.a.b.a.j.b	ENSGT00390000010316	ENSGT00940000159152.d.d	ENSGT00390000011295.a	ENSGT00390000015228
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00950000183010.a.b.a.a.b	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000168691.b	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00940000153311.a.b.a.j.b	ENSGT00390000010316	ENSGT00940000159152.d.d	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590
Beluga whale	MODERN SPECIES	84	ENSDLEG00000008980	RAPH1 (ENSDLEG00000008223)	ENSDLEG00000008100	ENSDLEG00000020428	NBEAL1 (ENSDLEG00000018755)	CARF (ENSDLEG00000018361)	WDR12 (ENSDLEG00000018347)	ICA1L (ENSDLEG00000018321)	FAM117B (ENSDLEG00000018310)	BMPR2 (ENSDLEG00000018287)	ENSDLEG00000018249	ENSDLEG00000018236	KIAA2012 (ENSDLEG00000018200)	FZD7 (ENSDLEG00000018188)	CDK15 (ENSDLEG00000018138) #21	ALS2 (ENSDLEG00000018091) #22	MPP4 (ENSDLEG00000018040) #23	TMEM237 (ENSDLEG00000018013) #24	ENSDLEG00000017999	ENSDLEG00000017990	ENSDLEG00000017981	STRADB (ENSDLEG00000017967)	TRAK2 (ENSDLEG00000017933)	CASP8 (ENSDLEG00000017912)	CASP10 (ENSDLEG00000017886)	CFLAR (ENSDLEG00000017824)	ENSDLEG00000017810	NDUFB3 (ENSDLEG00000017800)	ENSDLEG00000017782	FAM126B (ENSDLEG00000017730)	ORC2 (ENSDLEG00000017685)
Narwhal	MODERN SPECIES	302	ENSMMNG00015006290	RAPH1 (ENSMMNG00015006494)	ABI2 (ENSMMNG00015006963)	CYP20A1 (ENSMMNG00015007001)	NBEAL1 (ENSMMNG00015007045)	CARF (ENSMMNG00015007132)	WDR12 (ENSMMNG00015007273)	ICA1L (ENSMMNG00015007312)	FAM117B (ENSMMNG00015007345)	BMPR2 (ENSMMNG00015007390)	NOP58 (ENSMMNG00015007487)	SUMO1 (ENSMMNG00015007566)	KIAA2012 (ENSMMNG00015007625)	FZD7 (ENSMMNG00015007670)	CDK15 (ENSMMNG00015007704) #21	ALS2 (ENSMMNG00015007780) #22	MPP4 (ENSMMNG00015008109) #23	TMEM237 (ENSMMNG00015008418) #24	ENSMMNG00015008486	ENSMMNG00015008548	STRADB (ENSMMNG00015008568)	TRAK2 (ENSMMNG00015008594)	CASP8 (ENSMMNG00015008620)	CASP10 (ENSMMNG00015008635)	CFLAR (ENSMMNG00015008658)	ENSMMNG00015008677	NDUFB3 (ENSMMNG00015008687)	HYCC2 (ENSMMNG00015008700)	ENSMMNG00015008710	ORC2 (ENSMMNG00015008727)	NIF3L1 (ENSMMNG00015008742)
Vaquita	MODERN SPECIES	18	ENSPSNG00000009309	RAPH1 (ENSPSNG00000009801)	ABI2 (ENSPSNG00000011330)	CYP20A1 (ENSPSNG00000011532)	NBEAL1 (ENSPSNG00000011649)	CARF (ENSPSNG00000011886)	WDR12 (ENSPSNG00000012441)	ICA1L (ENSPSNG00000012492)	FAM117B (ENSPSNG00000012551)	BMPR2 (ENSPSNG00000012669)	NOP58 (ENSPSNG00000012735)	SUMO1 (ENSPSNG00000012848)	KIAA2012 (ENSPSNG00000013027)	FZD7 (ENSPSNG00000013312)	CDK15 (ENSPSNG00000013400) #21	ALS2 (ENSPSNG00000014137) #22	MPP4 (ENSPSNG00000014630) #23	TMEM237 (ENSPSNG00000016656) #24	ENSPSNG00000016850	ENSPSNG00000017326	STRADB (ENSPSNG00000017373)	TRAK2 (ENSPSNG00000017440)	ENSPSNG00000017496	CASP8 (ENSPSNG00000017590)	CASP10 (ENSPSNG00000017668)	CFLAR (ENSPSNG00000017754)	ENSPSNG00000017846	NDUFB3 (ENSPSNG00000017874)	ENSPSNG00000017913	ENSPSNG00000017952	ORC2 (ENSPSNG00000017971)
Dolphin	MODERN SPECIES	2812															CDK15 (ENSTTRG00000009318) #21	ALS2 (ENSTTRG00000009317) #22	MPP4 (ENSTTRG00000009315) #23	TMEM237 (ENSTTRG00000009314) #24	ENSTTRG00000009311	STRADB (ENSTTRG00000009309)
Sperm whale	MODERN SPECIES	11	ENSPCTG00005005119	RAPH1 (ENSPCTG00005003938)	ABI2 (ENSPCTG00005003833)	CYP20A1 (ENSPCTG00005003802)	NBEAL1 (ENSPCTG00005003780)	CARF (ENSPCTG00005003645)	WDR12 (ENSPCTG00005003584)	ICA1L (ENSPCTG00005003564)	FAM117B (ENSPCTG00005003547)	BMPR2 (ENSPCTG00005003518)	NOP58 (ENSPCTG00005003474)	ENSPCTG00005003434	KIAA2012 (ENSPCTG00005003389)	FZD7 (ENSPCTG00005003371)	CDK15 (ENSPCTG00005003352) #21	ALS2 (ENSPCTG00005003300) #22	MPP4 (ENSPCTG00005002274) #23	TMEM237 (ENSPCTG00005002055) #24	ENSPCTG00005002043	ENSPCTG00005002017	ENSPCTG00005002007	TRAK2 (ENSPCTG00005001954)	CASP8 (ENSPCTG00005001931)	CASP10 (ENSPCTG00005001909)	CFLAR (ENSPCTG00005001880)	NDUFB3 (ENSPCTG00005001863)	ENSPCTG00005001851	FAM126B (ENSPCTG00005001830)	ORC2 (ENSPCTG00005001802)	NIF3L1 (ENSPCTG00005001774)	PPIL3 (ENSPCTG00005001749)
Blue whale	MODERN SPECIES	18	ENSBMSG00010000193	ABI2 (ENSBMSG00010006723)	CYP20A1 (ENSBMSG00010006657)	ENSBMSG00010006612	ENSBMSG00010006579	CARF (ENSBMSG00010006417)	WDR12 (ENSBMSG00010006329)	ICA1L (ENSBMSG00010006262)	FAM117B (ENSBMSG00010006217)	BMPR2 (ENSBMSG00010006114)	NOP58 (ENSBMSG00010006045)	SUMO1 (ENSBMSG00010006010)	KIAA2012 (ENSBMSG00010005958)	FZD7 (ENSBMSG00010005931)	CDK15 (ENSBMSG00010005855) #21	ALS2 (ENSBMSG00010005735) #22	MPP4 (ENSBMSG00010004821) #23	TMEM237 (ENSBMSG00010004486) #24	ENSBMSG00010004401	STRADB (ENSBMSG00010004272)	TRAK2 (ENSBMSG00010004246)	ENSBMSG00010004235	FLACC1 (ENSBMSG00010004200)	CASP8 (ENSBMSG00010004172)	CASP10 (ENSBMSG00010004156)	CFLAR (ENSBMSG00010004118)	ENSBMSG00010004090	ENSBMSG00010004069	HYCC2 (ENSBMSG00010004046)	ORC2 (ENSBMSG00010003997)	NIF3L1 (ENSBMSG00010003954)
Pecora	ANCESTRAL SPECIES	16	ENSGT00940000156552	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316.w	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Percora_a	ANCESTRAL SPECIES	5	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316.w	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Bovidae	ANCESTRAL SPECIES	8	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v.cb	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316.w	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Bovinae	ANCESTRAL SPECIES	5	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v.cb	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000157458.c	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316.w.c	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Bos	ANCESTRAL SPECIES	6	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v.cb	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000157458.c	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316.w.c	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Bos_b	ANCESTRAL SPECIES	3	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v.cb	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000157458.c	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316.w.c	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Cow	MODERN SPECIES	11	ABI2 (ENSBTAG00000011017)	CYP20A1 (ENSBTAG00000000851)	NBEAL1 (ENSBTAG00000014469)	ENSBTAG00000019994	CARF (ENSBTAG00000016000)	ENSBTAG00000053168	WDR12 (ENSBTAG00000015424)	ICA1L (ENSBTAG00000008673)	FAM117B (ENSBTAG00000048876)	BMPR2 (ENSBTAG00000006420)	NOP58 (ENSBTAG00000005517)	SUMO1 (ENSBTAG00000049402)	KIAA2012 (ENSBTAG00000034192)	FZD7 (ENSBTAG00000002283)	CDK15 (ENSBTAG00000055073) #21	ALS2 (ENSBTAG00000007395) #22	MPP4 (ENSBTAG00000052816) #23	TMEM237 (ENSBTAG00000017437) #24	C2CD6 (ENSBTAG00000017436)	STRADB (ENSBTAG00000019298)	TRAK2 (ENSBTAG00000014933)	FLACC1 (ENSBTAG00000012334)	CASP8 (ENSBTAG00000015718)	CFLAR (ENSBTAG00000010998)	NDUFB3 (ENSBTAG00000012760)	HYCC2 (ENSBTAG00000021201)	ORC2 (ENSBTAG00000031473)	NIF3L1 (ENSBTAG00000018282)	PPIL3 (ENSBTAG00000005416)	CLK1 (ENSBTAG00000005408)	BZW1 (ENSBTAG00000006049)
Hybrid Bos Indicus	MODERN SPECIES	11	RAPH1 (ENSBIXG00005031591)	ABI2 (ENSBIXG00005031590)	CYP20A1 (ENSBIXG00005031589)	NBEAL1 (ENSBIXG00005031588)	ENSBIXG00005031587	CARF (ENSBIXG00005031586)	WDR12 (ENSBIXG00005031585)	ICA1L (ENSBIXG00005031584)	FAM117B (ENSBIXG00005031583)	BMPR2 (ENSBIXG00005031582)	NOP58 (ENSBIXG00005031577)	ENSBIXG00005031575	KIAA2012 (ENSBIXG00005031574)	FZD7 (ENSBIXG00005031573)	CDK15 (ENSBIXG00005031571) #21	ALS2 (ENSBIXG00005031570) #22	MPP4 (ENSBIXG00005031568) #23	TMEM237 (ENSBIXG00005031567) #24	ENSBIXG00005031566	STRADB (ENSBIXG00005031565)	TRAK2 (ENSBIXG00005031564)	ENSBIXG00005031563	CASP8 (ENSBIXG00005031562)	FLACC1 (ENSBIXG00005031561)	CFLAR (ENSBIXG00005031559)	ENSBIXG00005031558	HYCC2 (ENSBIXG00005031556)	ORC2 (ENSBIXG00005031555)	NIF3L1 (ENSBIXG00005031554)	PPIL3 (ENSBIXG00005031553)	CLK1 (ENSBIXG00005031552)
Bos_a	ANCESTRAL SPECIES	4	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v.cb	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000157458.c	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316.w.c	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Wild yak	MODERN SPECIES	1623	ENSBMUG00000018823	ABI2 (ENSBMUG00000018557)	CYP20A1 (ENSBMUG00000018465)	NBEAL1 (ENSBMUG00000018435)	CARF (ENSBMUG00000018245)	WDR12 (ENSBMUG00000018135)	ICA1L (ENSBMUG00000018119)	ENSBMUG00000018084	ENSBMUG00000018077	BMPR2 (ENSBMUG00000018053)	NOP58 (ENSBMUG00000017992)	ENSBMUG00000017957	KIAA2012 (ENSBMUG00000017856)	FZD7 (ENSBMUG00000017750)	CDK15 (ENSBMUG00000017707) #21	ALS2 (ENSBMUG00000017587) #22	MPP4 (ENSBMUG00000017529) #23	TMEM237 (ENSBMUG00000017070) #24	ENSBMUG00000017038	STRADB (ENSBMUG00000017010)	TRAK2 (ENSBMUG00000016996)	ENSBMUG00000016979	FLACC1 (ENSBMUG00000016974)	CASP8 (ENSBMUG00000016946)
Domestic yak	MODERN SPECIES	11	CYP20A1 (ENSBGRG00000015562)	NBEAL1 (ENSBGRG00000016043)	ENSBGRG00000016261	CARF (ENSBGRG00000016286)	ENSBGRG00000016729	WDR12 (ENSBGRG00000016744)	ICA1L (ENSBGRG00000016892)	FAM117B (ENSBGRG00000017110)	ENSBGRG00000017311	BMPR2 (ENSBGRG00000017354)	NOP58 (ENSBGRG00000017588)	ENSBGRG00000017875	KIAA2012 (ENSBGRG00000018013)	FZD7 (ENSBGRG00000018191)	CDK15 (ENSBGRG00000018223) #21	ALS2 (ENSBGRG00000018345) #22	MPP4 (ENSBGRG00000018555) #23	TMEM237 (ENSBGRG00000021384) #24	ENSBGRG00000021802	STRADB (ENSBGRG00000022109)	TRAK2 (ENSBGRG00000022201)	FLACC1 (ENSBGRG00000022275)	ENSBGRG00000022390	CASP8 (ENSBGRG00000022436)	ENSBGRG00000022534	ENSBGRG00000022548	CFLAR (ENSBGRG00000022578)	ENSBGRG00000022737	ENSBGRG00000022748	HYCC2 (ENSBGRG00000022773)	ORC2 (ENSBGRG00000022926)
American bison	MODERN SPECIES	3330	CD28 (ENSBBBG00000002157)	ENSBBBG00000011830	ABI2 (ENSBBBG00000011940)	CYP20A1 (ENSBBBG00000002236)	NBEAL1 (ENSBBBG00000011985)	CARF (ENSBBBG00000012044)	WDR12 (ENSBBBG00000012064)	ICA1L (ENSBBBG00000012090)	ENSBBBG00000012094	ENSBBBG00000002273	BMPR2 (ENSBBBG00000012144)	NOP58 (ENSBBBG00000012170)	ENSBBBG00000012202	KIAA2012 (ENSBBBG00000002300)	CDK15 (ENSBBBG00000012266) #21	ALS2 (ENSBBBG00000012289) #22	MPP4 (ENSBBBG00000002442) #23	TMEM237 (ENSBBBG00000002465) #24	ENSBBBG00000012811	STRADB (ENSBBBG00000001783)	TRAK2 (ENSBBBG00000002490)	ENSBBBG00000001771	FLACC1 (ENSBBBG00000012834)	CASP8 (ENSBBBG00000012853)	CFLAR (ENSBBBG00000012895)	ENSBBBG00000002548	HYCC2 (ENSBBBG00000012910)	ORC2 (ENSBBBG00000007976)	NIF3L1 (ENSBBBG00000012964)	PPIL3 (ENSBBBG00000012973)	CLK1 (ENSBBBG00000002583)
Caprinae	ANCESTRAL SPECIES	5	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v.cb	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00530000064199	ENSGT00390000010316.w	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Goat	MODERN SPECIES	11	RAPH1 (ENSCHIG00000025930)	ABI2 (ENSCHIG00000002652)	CYP20A1 (ENSCHIG00000022946)	NBEAL1 (ENSCHIG00000000921)	ENSCHIG00000016764	CARF (ENSCHIG00000023655)	WDR12 (ENSCHIG00000009469)	ICA1L (ENSCHIG00000013077)	FAM117B (ENSCHIG00000014630)	BMPR2 (ENSCHIG00000020243)	NOP58 (ENSCHIG00000025013)	ENSCHIG00000008668	KIAA2012 (ENSCHIG00000014714)	FZD7 (ENSCHIG00000026310)	CDK15 (ENSCHIG00000009588) #21	ALS2 (ENSCHIG00000023750) #22	MPP4 (ENSCHIG00000018210) #23	TMEM237 (ENSCHIG00000025303) #24	ENSCHIG00000024118	STRADB (ENSCHIG00000015673)	TRAK2 (ENSCHIG00000026628)	FLACC1 (ENSCHIG00000022026)	CASP8 (ENSCHIG00000019146)	ENSCHIG00000003629	CFLAR (ENSCHIG00000016459)	ENSCHIG00000017826	NDUFB3 (ENSCHIG00000022914)	HYCC2 (ENSCHIG00000016483)	ORC2 (ENSCHIG00000021629)	NIF3L1 (ENSCHIG00000009478)	PPIL3 (ENSCHIG00000019642)
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020008167	RAPH1 (ENSOARG00020007863)	ABI2 (ENSOARG00020007596)	CYP20A1 (ENSOARG00020007538)	NBEAL1 (ENSOARG00020007440)	CARF (ENSOARG00020006968)	WDR12 (ENSOARG00020006896)	ICA1L (ENSOARG00020006778)	FAM117B (ENSOARG00020006688)	BMPR2 (ENSOARG00020006563)	NOP58 (ENSOARG00020023408)	SUMO1 (ENSOARG00020023283)	KIAA2012 (ENSOARG00020023194)	FZD7 (ENSOARG00020023182)	CDK15 (ENSOARG00020022852) #21	ALS2 (ENSOARG00020022676) #22	MPP4 (ENSOARG00020018870) #23	TMEM237 (ENSOARG00020018644) #24	ENSOARG00020018022	STRADB (ENSOARG00020017965)	TRAK2 (ENSOARG00020017672)	FLACC1 (ENSOARG00020017518)	CASP8 (ENSOARG00020017221)	ENSOARG00020017157	NDUFB3 (ENSOARG00020017109)	NDUFB3 (ENSOARG00020017061)	FAM126B (ENSOARG00020016858)	ORC2 (ENSOARG00020016740)	NIF3L1 (ENSOARG00020016593)	PPIL3 (ENSOARG00020016501)	CLK1 (ENSOARG00020016395)
Siberian musk deer	MODERN SPECIES	351		RAPH1 (ENSMMSG00000015916)	ABI2 (ENSMMSG00000015631)	CYP20A1 (ENSMMSG00000015574)	NBEAL1 (ENSMMSG00000015534)	CARF (ENSMMSG00000015323)	WDR12 (ENSMMSG00000015269)	ICA1L (ENSMMSG00000015216)	FAM117B (ENSMMSG00000015175)	BMPR2 (ENSMMSG00000015064)	ENSMMSG00000015014	ENSMMSG00000014944	KIAA2012 (ENSMMSG00000014878)	FZD7 (ENSMMSG00000014860)	CDK15 (ENSMMSG00000014595) #21	ALS2 (ENSMMSG00000014494) #22	MPP4 (ENSMMSG00000011618) #23	TMEM237 (ENSMMSG00000011381) #24	STRADB (ENSMMSG00000011336)	TRAK2 (ENSMMSG00000011295)	FLACC1 (ENSMMSG00000011224)	CASP8 (ENSMMSG00000011027)	CFLAR (ENSMMSG00000010965)	NDUFB3 (ENSMMSG00000010949)	HYCC2 (ENSMMSG00000024338)	ENSMMSG00000024336	ORC2 (ENSMMSG00000024335)	NIF3L1 (ENSMMSG00000024332)	PPIL3 (ENSMMSG00000024329)	CLK1 (ENSMMSG00000024326)	ENSMMSG00000024321
Yarkand deer	MODERN SPECIES	31	ENSCHYG00000003256	CYP20A1 (ENSCHYG00000003265)	NBEAL1 (ENSCHYG00000003290)	CARF (ENSCHYG00000003336)	ENSCHYG00000003419	WDR12 (ENSCHYG00000003428)	ICA1L (ENSCHYG00000003466)	FAM117B (ENSCHYG00000003510)	BMPR2 (ENSCHYG00000003535)	NOP58 (ENSCHYG00000003579)	ENSCHYG00000003640	ENSCHYG00000003665	KIAA2012 (ENSCHYG00000003689)	FZD7 (ENSCHYG00000003728)	CDK15 (ENSCHYG00000003776) #21	ALS2 (ENSCHYG00000003878) #22	MPP4 (ENSCHYG00000004046) #23	TMEM237 (ENSCHYG00000004397) #24	C2CD6 (ENSCHYG00000004505)	STRADB (ENSCHYG00000004596)	TRAK2 (ENSCHYG00000004632)	FLACC1 (ENSCHYG00000004659)	CASP8 (ENSCHYG00000004683)	CFLAR (ENSCHYG00000004722)	ENSCHYG00000004767	HYCC2 (ENSCHYG00000004790)	ORC2 (ENSCHYG00000004839)	NIF3L1 (ENSCHYG00000004879)	PPIL3 (ENSCHYG00000004901)	CLK1 (ENSCHYG00000004911)	ENSCHYG00000004999
Camelidae	ANCESTRAL SPECIES	58	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Alpaca	MODERN SPECIES	3021										NOP58 (ENSVPAG00000006715)	SUMO1 (ENSVPAG00000006713)	ENSVPAG00000006710	ENSVPAG00000006706	FZD7 (ENSVPAG00000006705)	CDK15 (ENSVPAG00000006704) #21	ALS2 (ENSVPAG00000006703) #22	ENSVPAG00000006696 #23	TMEM237 (ENSVPAG00000006695) #24	ENSVPAG00000006694	ENSVPAG00000006693	TRAK2 (ENSVPAG00000006692)	ENSVPAG00000006691	CASP8 (ENSVPAG00000006690)	CASP10 (ENSVPAG00000006689)	CFLAR (ENSVPAG00000006687)	NDUFB3 (ENSVPAG00000006686)	HYCC2 (ENSVPAG00000006685)	ORC2 (ENSVPAG00000006684)	NIF3L1 (ENSVPAG00000006683)	ENSVPAG00000006681	CLK1 (ENSVPAG00000006678)
Arabian camel	MODERN SPECIES	31	ENSCDRG00005018577	ABI2 (ENSCDRG00005018744)	NBEAL1 (ENSCDRG00005019031)	CARF (ENSCDRG00005019098)	WDR12 (ENSCDRG00005019221)	ICA1L (ENSCDRG00005019255)	ENSCDRG00005019283	ENSCDRG00005019289	BMPR2 (ENSCDRG00005019320)	ENSCDRG00005019360	NOP58 (ENSCDRG00005019373)	SUMO1 (ENSCDRG00005019446)	KIAA2012 (ENSCDRG00005019503)	FZD7 (ENSCDRG00005019516)	CDK15 (ENSCDRG00005019534) #21	ALS2 (ENSCDRG00005019833) #22	MPP4 (ENSCDRG00005019977) #23	TMEM237 (ENSCDRG00005021415) #24	ENSCDRG00005021425	STRADB (ENSCDRG00005021435)	TRAK2 (ENSCDRG00005021447)	FLACC1 (ENSCDRG00005006384)	CASP8 (ENSCDRG00005006441)	CASP10 (ENSCDRG00005006612)	ENSCDRG00005006679	CFLAR (ENSCDRG00005006763)	ENSCDRG00005006864	HYCC2 (ENSCDRG00005006918)	ORC2 (ENSCDRG00005007036)	NIF3L1 (ENSCDRG00005007147)	PPIL3 (ENSCDRG00005007234)
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT01090000263468	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Carnivora	ANCESTRAL SPECIES	17	ENSGT00940000157820.a.a	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Caniformia	ANCESTRAL SPECIES	14	ENSGT00940000157820.a.a	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00940000157820.a.a	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Ursidae	ANCESTRAL SPECIES	7	ENSGT00940000157820.a.a.k	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00950000183314.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159.d #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.o	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Ursus	ANCESTRAL SPECIES	4	ENSGT00940000157820.a.a.k	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00950000183314.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159.d #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.o	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Polar bear	MODERN SPECIES	142	ABI2 (ENSUMAG00000022146)	CYP20A1 (ENSUMAG00000022062)	NBEAL1 (ENSUMAG00000021925)	ENSUMAG00000021909	CARF (ENSUMAG00000021907)	WDR12 (ENSUMAG00000021904)	ICA1L (ENSUMAG00000021899)	ENSUMAG00000021898	ENSUMAG00000021893	BMPR2 (ENSUMAG00000021888)	NOP58 (ENSUMAG00000021875)	ENSUMAG00000021873	KIAA2012 (ENSUMAG00000021861)	FZD7 (ENSUMAG00000021852)	CDK15 (ENSUMAG00000021838) #21	ALS2 (ENSUMAG00000021699) #22	MPP4 (ENSUMAG00000021611) #23	TMEM237 (ENSUMAG00000021594) #24	ENSUMAG00000021587	STRADB (ENSUMAG00000021585)	TRAK2 (ENSUMAG00000021580)	FLACC1 (ENSUMAG00000021573)	CASP8 (ENSUMAG00000021570)	CASP10 (ENSUMAG00000021566)	CFLAR (ENSUMAG00000021563)	ENSUMAG00000021560	HYCC2 (ENSUMAG00000021559)	ORC2 (ENSUMAG00000021479)	PPIL3 (ENSUMAG00000021460)	NIF3L1 (ENSUMAG00000021455)	CLK1 (ENSUMAG00000021445)
American black bear	MODERN SPECIES	374										ENSUAMG00000000067	NOP58 (ENSUAMG00000025100)	ENSUAMG00000025099	KIAA2012 (ENSUAMG00000025097)	FZD7 (ENSUAMG00000025096)	CDK15 (ENSUAMG00000025095) #21	ALS2 (ENSUAMG00000025093) #22
Giant Panda	MODERN SPECIES	11	ENSAMEG00000002970	ABI2 (ENSAMEG00000012960)	NBEAL1 (ENSAMEG00000013020)	CARF (ENSAMEG00000013068)	WDR12 (ENSAMEG00000013091)	ICA1L (ENSAMEG00000013120)	ENSAMEG00000026389	ENSAMEG00000013132	BMPR2 (ENSAMEG00000013148)	ENSAMEG00000030387	NOP58 (ENSAMEG00000013168)	ENSAMEG00000013225	KIAA2012 (ENSAMEG00000013230)	FZD7 (ENSAMEG00000019023)	CDK15 (ENSAMEG00000013241) #21	ALS2 (ENSAMEG00000013264) #22	MPP4 (ENSAMEG00000013343) #23	TMEM237 (ENSAMEG00000013442) #24	ENSAMEG00000030216	C2CD6 (ENSAMEG00000023801)	STRADB (ENSAMEG00000006175)	TRAK2 (ENSAMEG00000006116)	ENSAMEG00000006088	CASP10 (ENSAMEG00000006047)	CFLAR (ENSAMEG00000006033)	ENSAMEG00000006027	HYCC2 (ENSAMEG00000005996)	ORC2 (ENSAMEG00000005940)	NIF3L1 (ENSAMEG00000005921)	PPIL3 (ENSAMEG00000005917)	CLK1 (ENSAMEG00000005887)
Mustelinae	ANCESTRAL SPECIES	44	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202.j	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000163579	ENSGT00940000159722
Ferret	MODERN SPECIES	265	ABI2 (ENSMPUG00000000402)	ENSMPUG00000000397	ENSMPUG00000000395	NBEAL1 (ENSMPUG00000000385)	CARF (ENSMPUG00000000382)	WDR12 (ENSMPUG00000000379)	ICA1L (ENSMPUG00000000375)	FAM117B (ENSMPUG00000000358)	BMPR2 (ENSMPUG00000000354)	NOP58 (ENSMPUG00000000351)	ENSMPUG00000000335	ENSMPUG00000000334	ENSMPUG00000000326	FZD7 (ENSMPUG00000018904)	CDK15 (ENSMPUG00000000322) #21	ALS2 (ENSMPUG00000000314) #22	MPP4 (ENSMPUG00000000255) #23	TMEM237 (ENSMPUG00000000252) #24	ENSMPUG00000000250	STRADB (ENSMPUG00000000249)	ENSMPUG00000000247	ENSMPUG00000000245	FLACC1 (ENSMPUG00000000243)	CASP8 (ENSMPUG00000000240)	CASP10 (ENSMPUG00000000231)	CFLAR (ENSMPUG00000000230)	HYCC2 (ENSMPUG00000000212)	ORC2 (ENSMPUG00000000208)	NIF3L1 (ENSMPUG00000000206)	CLK1 (ENSMPUG00000000201)	KLF8 (ENSMPUG00000000194)
American mink	MODERN SPECIES	40	RAPH1 (ENSNVIG00000006475)	ABI2 (ENSNVIG00000006920)	CYP20A1 (ENSNVIG00000007093)	NBEAL1 (ENSNVIG00000007140)	F6SXV3 (ENSNVIG00000007220)	WDR12 (ENSNVIG00000007326)	ICA1L (ENSNVIG00000007376)	ENSNVIG00000007441	ENSNVIG00000007447	BMPR2 (ENSNVIG00000007469)	NOP58 (ENSNVIG00000007538)	SUMO1 (ENSNVIG00000007649)	KIAA2012 (ENSNVIG00000007730)	FZD7 (ENSNVIG00000007800)	CDK15 (ENSNVIG00000007812) #21	ALS2 (ENSNVIG00000007935) #22	MPP4 (ENSNVIG00000008115) #23	TMEM237 (ENSNVIG00000008223) #24	ENSNVIG00000008322	STRADB (ENSNVIG00000008385)	TRAK2 (ENSNVIG00000008449)	G5E9S3 (ENSNVIG00000008480)	CASP8 (ENSNVIG00000008522)	CASP10 (ENSNVIG00000008626)	CFLAR (ENSNVIG00000008667)	NDUB3 (ENSNVIG00000008792)	HYCC2 (ENSNVIG00000008829)	ORC2 (ENSNVIG00000008870)	NIF3L (ENSNVIG00000008895)	ENSNVIG00000008933	ENSNVIG00000008938
Canidae	ANCESTRAL SPECIES	20	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.e	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Canis_lupus	ANCESTRAL SPECIES	32	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00940000154694.l.b.b.a.a.b	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v.kb	ENSGT00860000133854	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.e	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Dingo	MODERN SPECIES	398	ENSCAFG00020001784	ENSCAFG00020001801	CYP20A1 (ENSCAFG00020001812)	NBEAL1 (ENSCAFG00020001831)	ENSCAFG00020001912	CARF (ENSCAFG00020001932)	WDR12 (ENSCAFG00020001958)	ICA1L (ENSCAFG00020002040)	FAM117B (ENSCAFG00020002101)	BMPR2 (ENSCAFG00020002138)	NOP58 (ENSCAFG00020002394)	ENSCAFG00020002419	KIAA2012 (ENSCAFG00020002449)	ENSCAFG00020002503	CDK15 (ENSCAFG00020002551) #21	ALS2 (ENSCAFG00020002611) #22	MPP4 (ENSCAFG00020003035) #23	TMEM237 (ENSCAFG00020003328) #24	ENSCAFG00020003343	STRADB (ENSCAFG00020003358)	TRAK2 (ENSCAFG00020003375)	FLACC1 (ENSCAFG00020003467)	CASP8 (ENSCAFG00020003476)	CASP10 (ENSCAFG00020003487)	ENSCAFG00020003528	CFLAR (ENSCAFG00020003542)	NDUFB3 (ENSCAFG00020003552)	HYCC2 (ENSCAFG00020003567)	ORC2 (ENSCAFG00020003630)	NIF3L1 (ENSCAFG00020004364)	PPIL3 (ENSCAFG00020004369)
Dog	MODERN SPECIES	30	CYP20A1 (ENSCAFG00845016438)	NBEAL1 (ENSCAFG00845016248)	ENSCAFG00845016161	CARF (ENSCAFG00845015868)	WDR12 (ENSCAFG00845015685)	ICA1L (ENSCAFG00845015647)	FAM117B (ENSCAFG00845015582)	BMPR2 (ENSCAFG00845015459)	NOP58 (ENSCAFG00845015320)	SUMO1 (ENSCAFG00845015246)	KIAA2012 (ENSCAFG00845015039)	ENSCAFG00845015007	FZD7 (ENSCAFG00845030754)	CDK15 (ENSCAFG00845030741) #21	ENSCAFG00845030734	ALS2 (ENSCAFG00845030698) #22	MPP4 (ENSCAFG00845030583) #23	TMEM237 (ENSCAFG00845030434) #24	C2CD6 (ENSCAFG00845030271)	STRADB (ENSCAFG00845030183)	TRAK2 (ENSCAFG00845030112)	FLACC1 (ENSCAFG00845030068)	CASP8 (ENSCAFG00845030024)	MYCBP (ENSCAFG00845029987)	CASP10 (ENSCAFG00845029977)	CFLAR (ENSCAFG00845029893)	NDUFB3 (ENSCAFG00845029848)	HYCC2 (ENSCAFG00845029821)	ORC2 (ENSCAFG00845029735)	NIF3L1 (ENSCAFG00845029603)	PPIL3 (ENSCAFG00845029569)
Red fox	MODERN SPECIES	41	CYP20A1 (ENSVVUG00000017336)	NBEAL1 (ENSVVUG00000017646)	ENSVVUG00000017885	CARF (ENSVVUG00000017926)	WDR12 (ENSVVUG00000018074)	ICA1L (ENSVVUG00000018171)	ENSVVUG00000018231	ENSVVUG00000018233	BMPR2 (ENSVVUG00000018236)	NOP58 (ENSVVUG00000018258)	ENSVVUG00000018290	KIAA2012 (ENSVVUG00000018303)	ENSVVUG00000018323	FZD7 (ENSVVUG00000018326)	CDK15 (ENSVVUG00000018343) #21	ALS2 (ENSVVUG00000018378) #22	MPP4 (ENSVVUG00000018433) #23	TMEM237 (ENSVVUG00000018780) #24	C2CD6 (ENSVVUG00000018827)	STRADB (ENSVVUG00000018875)	TRAK2 (ENSVVUG00000018884)	ALS2CR12 (ENSVVUG00000018915)	CASP8 (ENSVVUG00000018943)	CASP10 (ENSVVUG00000018953)	CFLAR (ENSVVUG00000018963)	NDUFB3 (ENSVVUG00000018975)	FAM126B (ENSVVUG00000018981)	ORC2 (ENSVVUG00000018996)	NIF3L1 (ENSVVUG00000019010)	PPIL3 (ENSVVUG00000019021)	CLK1 (ENSVVUG00000019051)
Felidae	ANCESTRAL SPECIES	15	ENSGT00940000157820.a.a	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Panthera	ANCESTRAL SPECIES	9	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00950000182922.a.a.a.b.a.b.a.b.b.c.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00950000182891.a.a.a	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00950000182922.a.a.a.b.a.b.a.b.b.c.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00950000182891.a.a.a	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
leopard	MODERN SPECIES	196				ENSPPRG00000014526	CARF (ENSPPRG00000014454)	WDR12 (ENSPPRG00000014037)	ICA1L (ENSPPRG00000014024)	FAM117B (ENSPPRG00000013956)	BMPR2 (ENSPPRG00000013936)	NOP58 (ENSPPRG00000013837)	SUMO1 (ENSPPRG00000013405)	ENSPPRG00000012375	KIAA2012 (ENSPPRG00000013282)	FZD7 (ENSPPRG00000012355)	CDK15 (ENSPPRG00000013166) #21	ALS2 (ENSPPRG00000012887) #22	MPP4 (ENSPPRG00000012822) #23	TMEM237 (ENSPPRG00000012249) #24
lion	MODERN SPECIES	8	ENSPLOG00000010151	ABI2 (ENSPLOG00000010377)	CYP20A1 (ENSPLOG00000010756)	NBEAL1 (ENSPLOG00000010825)	CARF (ENSPLOG00000011224)	WDR12 (ENSPLOG00000011514)	ICA1L (ENSPLOG00000011556)	FAM117B (ENSPLOG00000011690)	BMPR2 (ENSPLOG00000011747)	NOP58 (ENSPLOG00000011950)	ENSPLOG00000012052	ENSPLOG00000012180	KIAA2012 (ENSPLOG00000012218)	FZD7 (ENSPLOG00000012419)	CDK15 (ENSPLOG00000012480) #21	ALS2 (ENSPLOG00000012986) #22	MPP4 (ENSPLOG00000013660) #23	TMEM237 (ENSPLOG00000014799) #24	ENSPLOG00000015067	STRADB (ENSPLOG00000015110)	TRAK2 (ENSPLOG00000015326)	FLACC1 (ENSPLOG00000015436)	CASP8 (ENSPLOG00000015490)	ENSPLOG00000015584	CASP10 (ENSPLOG00000015629)	CFLAR (ENSPLOG00000015687)	NDUFB3 (ENSPLOG00000015772)	HYCC2 (ENSPLOG00000015803)	ORC2 (ENSPLOG00000015970)	NIF3L1 (ENSPLOG00000016032)	PPIL3 (ENSPLOG00000016086)
Tiger	MODERN SPECIES	313	ENSPTIG00000012473	ABI2 (ENSPTIG00000012734)	CYP20A1 (ENSPTIG00000012850)	NBEAL1 (ENSPTIG00000012887)	ENSPTIG00000008218	CARF (ENSPTIG00000012946)	WDR12 (ENSPTIG00000013035)	ICA1L (ENSPTIG00000013050)	ENSPTIG00000008227	BMPR2 (ENSPTIG00000013082)	NOP58 (ENSPTIG00000013131)	SUMO1 (ENSPTIG00000013157)	ENSPTIG00000008234	KIAA2012 (ENSPTIG00000013192)	CDK15 (ENSPTIG00000013223) #21	ALS2 (ENSPTIG00000013259) #22	MPP4 (ENSPTIG00000013368) #23	TMEM237 (ENSPTIG00000013692) #24	ENSPTIG00000013739	STRADB (ENSPTIG00000013805)	TRAK2 (ENSPTIG00000013824)	FLACC1 (ENSPTIG00000013844)	CASP8 (ENSPTIG00000013873)	ENSPTIG00000008242	CASP10 (ENSPTIG00000013894)	CFLAR (ENSPTIG00000013930)	NDUFB3 (ENSPTIG00000013945)	HYCC2 (ENSPTIG00000013955)	ORC2 (ENSPTIG00000013974)	NIF3L1 (ENSPTIG00000013986)	PPIL3 (ENSPTIG00000013998)
Cat	MODERN SPECIES	239	ABI2 (ENSFCAG00000012982)	CYP20A1 (ENSFCAG00000022927)	ENSFCAG00000048141	ENSFCAG00000027770	NBEAL1 (ENSFCAG00000025997)	CARF (ENSFCAG00000046458)	WDR12 (ENSFCAG00000026676)	ICA1L (ENSFCAG00000008514)	FAM117B (ENSFCAG00000046269)	BMPR2 (ENSFCAG00000014094)	NOP58 (ENSFCAG00000014093)	ENSFCAG00000031005	KIAA2012 (ENSFCAG00000027667)	FZD7 (ENSFCAG00000012609)	CDK15 (ENSFCAG00000000530) #21	ALS2 (ENSFCAG00000004007) #22	MPP4 (ENSFCAG00000004006) #23	TMEM237 (ENSFCAG00000004003) #24	C2CD6 (ENSFCAG00000009008)	ENSFCAG00000050162	STRADB (ENSFCAG00000029023)	TRAK2 (ENSFCAG00000006099)	FLACC1 (ENSFCAG00000004546)	CASP8 (ENSFCAG00000025854)	CASP10 (ENSFCAG00000004733)	CFLAR (ENSFCAG00000004731)	NDUFB3 (ENSFCAG00000029710)	HYCC2 (ENSFCAG00000018116)	ORC2 (ENSFCAG00000030533)	NIF3L1 (ENSFCAG00000041391)	PPIL3 (ENSFCAG00000005373)
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT01090000263468	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Equus	ANCESTRAL SPECIES	18	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT01090000263468	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Donkey	MODERN SPECIES	24	NBEAL1 (ENSEASG00005002684)	CARF (ENSEASG00005002591)	WDR12 (ENSEASG00005002567)	ENSEASG00005027147	ICA1L (ENSEASG00005002554)	FAM117B (ENSEASG00005031822)	BMPR2 (ENSEASG00005002457)	ENSEASG00005028104	ENSEASG00005035566	NOP58 (ENSEASG00005002393)	ENSEASG00005034084	ENSEASG00005024896	KIAA2012 (ENSEASG00005002371)	FZD7 (ENSEASG00005035989)	CDK15 (ENSEASG00005002347) #21	ALS2 (ENSEASG00005002332) #22	MPP4 (ENSEASG00005002081) #23	TMEM237 (ENSEASG00005002051) #24	ENSEASG00005002045	ENSEASG00005023565	STRADB (ENSEASG00005002039)	TRAK2 (ENSEASG00005002035)	ENSEASG00005024189	FLACC1 (ENSEASG00005036939)	CASP8 (ENSEASG00005002028)	ENSEASG00005002020	CASP10 (ENSEASG00005002004)	CFLAR (ENSEASG00005001994)	NDUFB3 (ENSEASG00005034994)	HYCC2 (ENSEASG00005001859)	ORC2 (ENSEASG00005001457)
Horse	MODERN SPECIES	9	ENSECAG00000022376	ABI2 (ENSECAG00000018236)	CYP20A1 (ENSECAG00000010884)	NBEAL1 (ENSECAG00000020049)	CARF (ENSECAG00000017624)	WDR12 (ENSECAG00000009547)	ICA1L (ENSECAG00000009288)	FAM117B (ENSECAG00000004249)	ENSECAG00000054476	BMPR2 (ENSECAG00000025141)	NOP58 (ENSECAG00000024696)	SUMO1 (ENSECAG00000024693)	KIAA2012 (ENSECAG00000024325)	FZD7 (ENSECAG00000024319)	CDK15 (ENSECAG00000023938) #21	ALS2 (ENSECAG00000009855) #22	MPP4 (ENSECAG00000022800) #23	TMEM237 (ENSECAG00000019645) #24	ENSECAG00000056360	ENSECAG00000044178	C2CD6 (ENSECAG00000029271)	STRADB (ENSECAG00000018298)	TRAK2 (ENSECAG00000010581)	FLACC1 (ENSECAG00000008300)	CASP8 (ENSECAG00000005210)	ENSECAG00000030369	CASP10 (ENSECAG00000024244)	CFLAR (ENSECAG00000021300)	NDUFB3 (ENSECAG00000020674)	HYCC2 (ENSECAG00000014614)	ORC2 (ENSECAG00000009270)
Chiroptera	ANCESTRAL SPECIES	11	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Greater horseshoe bat	MODERN SPECIES	26	RAPH1 (ENSRFEG00010013239)	ABI2 (ENSRFEG00010013372)	CYP20A1 (ENSRFEG00010013600)	NBEAL1 (ENSRFEG00010013724)	CARF (ENSRFEG00010013855)	WDR12 (ENSRFEG00010014405)	ICA1L (ENSRFEG00010014466)	FAM117B (ENSRFEG00010014554)	BMPR2 (ENSRFEG00010014707)	RPL39_1 (ENSRFEG00010014922)	NOP58 (ENSRFEG00010014939)	SUMO1 (ENSRFEG00010014996)	KIAA2012 (ENSRFEG00010015222)	FZD7 (ENSRFEG00010015580)	CDK15 (ENSRFEG00010015620) #21	ALS2 (ENSRFEG00010016365) #22	MPP4 (ENSRFEG00010016493) #23	TMEM237 (ENSRFEG00010016673) #24	ENSRFEG00010016786	STRADB (ENSRFEG00010016984)	TRAK2 (ENSRFEG00010017061)	FLACC1 (ENSRFEG00010017170)	CASP8 (ENSRFEG00010017380)	CASP10 (ENSRFEG00010017431)	ENSRFEG00010017455	CFLAR (ENSRFEG00010017495)	ENSRFEG00010017622	HYCC2 (ENSRFEG00010017661)	ORC2 (ENSRFEG00010017722)	NIF3L1 (ENSRFEG00010017775)	PPIL3 (ENSRFEG00010017851)
Microbat	MODERN SPECIES	940	ENSMLUG00000015108	ENSMLUG00000010834	ENSMLUG00000023829	ENSMLUG00000027037	ENSMLUG00000026446	ENSMLUG00000030619	ENSMLUG00000024540	FAM117B (ENSMLUG00000013812)	BMPR2 (ENSMLUG00000014783)	NOP58 (ENSMLUG00000006896)	ENSMLUG00000007504	ENSMLUG00000010077	FZD7 (ENSMLUG00000010034)	CDK15 (ENSMLUG00000017566) #21	ENSMLUG00000002501	ALS2 (ENSMLUG00000017564) #22	MPP4 (ENSMLUG00000017563) #23	TMEM237 (ENSMLUG00000017562) #24	ENSMLUG00000017559	ENSMLUG00000026061	STRADB (ENSMLUG00000017558)	TRAK2 (ENSMLUG00000004915)	FLACC1 (ENSMLUG00000015546)	CASP8 (ENSMLUG00000015535)	ENSMLUG00000030008	ENSMLUG00000022617	CFLAR (ENSMLUG00000005920)	ENSMLUG00000028281	NDUFB3 (ENSMLUG00000012878)	HYCC2 (ENSMLUG00000012874)	ORC2 (ENSMLUG00000001662)
Megabat	MODERN SPECIES	1528															CDK15 (ENSPVAG00000014033) #21	ALS2 (ENSPVAG00000014030) #22	MPP4 (ENSPVAG00000014029) #23	TMEM237 (ENSPVAG00000014028) #24
Atlantogenata	ANCESTRAL SPECIES	9	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Xenarthra	ANCESTRAL SPECIES	28				ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00940000154319.u.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Sloth	MODERN SPECIES	4466																ALS2 (ENSCHOG00000002474) #22	MPP4 (ENSCHOG00000002462) #23	TMEM237 (ENSCHOG00000002456) #24
Armadillo	MODERN SPECIES	1606					NBEAL1 (ENSDNOG00000008235)	CARF (ENSDNOG00000025534)	WDR12 (ENSDNOG00000047282)	ICA1L (ENSDNOG00000032118)	FAM117B (ENSDNOG00000032587)	BMPR2 (ENSDNOG00000013862)	NOP58 (ENSDNOG00000002285)	ENSDNOG00000015868	KIAA2012 (ENSDNOG00000004441)	FZD7 (ENSDNOG00000041349)	CDK15 (ENSDNOG00000007655) #21	ALS2 (ENSDNOG00000002128) #22	MPP4 (ENSDNOG00000002127) #23	ENSDNOG00000002126 #24	ENSDNOG00000003786	ENSDNOG00000047748	STRADB (ENSDNOG00000003778)	ENSDNOG00000036495	FLACC1 (ENSDNOG00000014593)	CASP8 (ENSDNOG00000035172)	CASP10 (ENSDNOG00000013716)	CFLAR (ENSDNOG00000018748)	NDUFB3 (ENSDNOG00000036366)	ENSDNOG00000007984	ORC2 (ENSDNOG00000001397)	NIF3L1 (ENSDNOG00000042985)	PPIL3 (ENSDNOG00000039120)
Afrotheria	ANCESTRAL SPECIES	1	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854.z.b	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319.a	ENSGT00940000160319.b	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000163579
Afrotheria_a	ANCESTRAL SPECIES	1	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319.v	ENSGT00860000133854.z.b	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319.a	ENSGT00940000160319.b	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000163579
Elephant	MODERN SPECIES	301	ENSLAFG00000015135	ABI2 (ENSLAFG00000015117)	CYP20A1 (ENSLAFG00000015110)	ENSLAFG00000015098	ENSLAFG00000020653	CARF (ENSLAFG00000017289)	WDR12 (ENSLAFG00000011955)	ICA1L (ENSLAFG00000016989)	FAM117B (ENSLAFG00000006427)	BMPR2 (ENSLAFG00000015201)	NOP58 (ENSLAFG00000015568)	ENSLAFG00000022855	ENSLAFG00000000462	FZD7 (ENSLAFG00000000464)	CDK15 (ENSLAFG00000012833) #21	ALS2 (ENSLAFG00000011953) #22	MPP4 (ENSLAFG00000011943) #23	TMEM237 (ENSLAFG00000011936) #24	ENSLAFG00000014846	ENSLAFG00000030241	ENSLAFG00000027906	STRADB (ENSLAFG00000014838)	TRAK2 (ENSLAFG00000026814)	FLACC1 (ENSLAFG00000018288)	CASP8 (ENSLAFG00000018282)	ENSLAFG00000032402	ENSLAFG00000025656	ENSLAFG00000002296	CFLAR (ENSLAFG00000021855)	NDUFB3 (ENSLAFG00000011365)	HYCC2 (ENSLAFG00000009899)
Hyrax	MODERN SPECIES	7549																ALS2 (ENSPCAG00000012750) #22	MPP4 (ENSPCAG00000012615) #23
Tenrec	MODERN SPECIES	4830															CDK15 (ENSETEG00000019737) #21	ALS2 (ENSETEG00000019733) #22
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209.a	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Diprotodontia	ANCESTRAL SPECIES	31	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A.a	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209.a	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Diprotodontia_a	ANCESTRAL SPECIES	30	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A.a	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209.a	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.e	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
koala	MODERN SPECIES	7	ENSPCIG00000031770	EMC2 (ENSPCIG00000013521)	TMEM74 (ENSPCIG00000025339)	TRHR (ENSPCIG00000025338)	NUDCD1 (ENSPCIG00000025328)	ENY2 (ENSPCIG00000025325)	PKHD1L1 (ENSPCIG00000025284)	ENSPCIG00000025280	SYBU (ENSPCIG00000025279)	KCNV1 (ENSPCIG00000025278)	ENSPCIG00000013968	SUMO1 (ENSPCIG00000008844)	ENSPCIG00000008846	FZD7 (ENSPCIG00000008847)	CDK15 (ENSPCIG00000008848) #21	ALS2 (ENSPCIG00000031642) #22	MPP4 (ENSPCIG00000012099) #23	TMEM237 (ENSPCIG00000012085) #24	ENSPCIG00000035941	STRADB (ENSPCIG00000019067)	TRAK2 (ENSPCIG00000019074)	ENSPCIG00000019085	CASP8 (ENSPCIG00000019107)	ENSPCIG00000019109	CFLAR (ENSPCIG00000019111)	ENSPCIG00000019113	HYCC2 (ENSPCIG00000019013)	ORC2 (ENSPCIG00000034597)	NIF3L1 (ENSPCIG00000019334)	PPIL3 (ENSPCIG00000019339)	CLK1 (ENSPCIG00000019466)
Common wonbat	MODERN SPECIES	1038	ENSVURG00010005495	RAPH1 (ENSVURG00010005515)	ABI2 (ENSVURG00010005572)	CYP20A1 (ENSVURG00010005594)	ENSVURG00010005614	NBEAL1 (ENSVURG00010005633)	CARF (ENSVURG00010005670)	WDR12 (ENSVURG00010005744)	ICA1L (ENSVURG00010005759)	FAM117B (ENSVURG00010005827)	BMPR2 (ENSVURG00010005868)	ENSVURG00010005919	SUMO1 (ENSVURG00010006638)	FZD7 (ENSVURG00010006641)	CDK15 (ENSVURG00010006676) #21	ALS2 (ENSVURG00010006744) #22	MPP4 (ENSVURG00010006829) #23	TMEM237 (ENSVURG00010008490) #24	ENSVURG00010008599	ENSVURG00010008610	STRADB (ENSVURG00010008621)	TRAK2 (ENSVURG00010008653)	CASP8 (ENSVURG00010008700)	ENSVURG00010008722	ENSVURG00010008731	CFLAR (ENSVURG00010008748)	ENSVURG00010008758	ENSVURG00010008768	HYCC2 (ENSVURG00010008776)	ORC2 (ENSVURG00010008787)	NIF3L1 (ENSVURG00010008841)
Wallaby	MODERN SPECIES	6106																ALS2 (ENSMEUG00000003466) #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000007679	ABI2 (ENSSHAG00000008450)	CYP20A1 (ENSSHAG00000028734)	ENSSHAG00000021267	NBEAL1 (ENSSHAG00000000284)	CARF (ENSSHAG00000006210)	WDR12 (ENSSHAG00000006960)	ICA1L (ENSSHAG00000007656)	FAM117B (ENSSHAG00000008247)	BMPR2 (ENSSHAG00000009795)	NOP58 (ENSSHAG00000011398)	ENSSHAG00000022830	ENSSHAG00000012030	FZD7 (ENSSHAG00000012997)	CDK15 (ENSSHAG00000013964) #21	ALS2 (ENSSHAG00000014644) #22	MPP4 (ENSSHAG00000014864) #23	TMEM237 (ENSSHAG00000015037) #24	ENSSHAG00000023780	STRADB (ENSSHAG00000030376)	TRAK2 (ENSSHAG00000024925)	ENSSHAG00000023296	CASP8 (ENSSHAG00000000760)	ENSSHAG00000021117	CFLAR (ENSSHAG00000013869)	NDUFB3 (ENSSHAG00000013520)	HYCC2 (ENSSHAG00000013139)	ORC2 (ENSSHAG00000012779)	NIF3L1 (ENSSHAG00000012698)	ENSSHAG00000025622	CLK1 (ENSSHAG00000012465)
Opossum	MODERN SPECIES	6	CYP20A1 (ENSMODG00000016255)	ENSMODG00000037522	NBEAL1 (ENSMODG00000016268)	ENSMODG00000047566	CARF (ENSMODG00000016272)	WDR12 (ENSMODG00000016275)	ICA1L (ENSMODG00000016279)	FAM117B (ENSMODG00000016284)	BMPR2 (ENSMODG00000016287)	ENSMODG00000040173	NOP58 (ENSMODG00000016294)	SUMO1 (ENSMODG00000045712)	ENSMODG00000025491	FZD7 (ENSMODG00000016310)	CDK15 (ENSMODG00000016326) #21	ALS2 (ENSMODG00000016329) #22	FNDC3B (ENSMODG00000021323)	GHSR (ENSMODG00000021322)	TNFSF10 (ENSMODG00000041585)	NCEH1 (ENSMODG00000051563)	ECT2 (ENSMODG00000021319)	SPATA16 (ENSMODG00000021318)	NLGN1 (ENSMODG00000021315)	NAALADL2 (ENSMODG00000021314)	ENSMODG00000024795	ENSMODG00000051427	ENSMODG00000021313	ENSMODG00000027370	TBL1XR1 (ENSMODG00000021312)	KCNMB2 (ENSMODG00000021309)	ZMAT3 (ENSMODG00000021308)
Platypus	MODERN SPECIES	18	ENSOANG00000048576	ENSOANG00000006769	ABI2 (ENSOANG00000001380)	CYP20A1 (ENSOANG00000015019)	ENSOANG00000009001	NBEAL1 (ENSOANG00000011085)	CARF (ENSOANG00000011095)	WDR12 (ENSOANG00000011097)	ICA1L (ENSOANG00000011099)	FAM117B (ENSOANG00000036215)	BMPR2 (ENSOANG00000012302)	NOP58 (ENSOANG00000002420)	SUMO1 (ENSOANG00000042366)	ENSOANG00000049358	CDK15 (ENSOANG00000022134) #21	ALS2 (ENSOANG00000001687) #22	ENSOANG00000044570 #23	TMEM237 (ENSOANG00000003258) #24	ENSOANG00000046860	STRADB (ENSOANG00000009606)	TRAK2 (ENSOANG00000046700)	ENSOANG00000038444	CASP8 (ENSOANG00000004013)	ENSOANG00000036261	ENSOANG00000000674	ENSOANG00000003495	ENSOANG00000045194	NDUFB3 (ENSOANG00000036170)	HYCC2 (ENSOANG00000044954)	ORC2 (ENSOANG00000010096)	NIF3L1 (ENSOANG00000010095)
Sauria	ANCESTRAL SPECIES	32	ENSGT00940000176171	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000003964.b	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Archelosauria	ANCESTRAL SPECIES	8	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00950000185065	ENSGT00390000003964.b	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Archosauria	ANCESTRAL SPECIES	6	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00950000185065	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Aves	ANCESTRAL SPECIES	8	ENSGT00940000155235	ENSGT00940000155408	ENSGT00940000157249	ENSGT00940000154453.b	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000003964.b	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Neognathae	ANCESTRAL SPECIES	6	ENSGT00940000161508	ENSGT00940000155235	ENSGT00940000155408	ENSGT00940000157249	ENSGT00940000154453.b	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00940000161508	ENSGT00940000155235	ENSGT00940000155408	ENSGT00940000157249	ENSGT00940000154453.b	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT00940000161508	ENSGT00940000155235	ENSGT00940000155408	ENSGT00940000157249	ENSGT00940000154453.b	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Golden eagle	MODERN SPECIES	22	KLF7 (ENSACCG00020003351)	CREB1 (ENSACCG00020003332)	METTL21A (ENSACCG00020003321)	ENSACCG00020003303	ENSACCG00020003288	PLEKHM3 (ENSACCG00020003252)	CARF (ENSACCG00020003224)	WDR12 (ENSACCG00020003209)	ENSACCG00020003192	ENSACCG00020003182	BMPR2 (ENSACCG00020003161)	NOP58 (ENSACCG00020003127)	SUMO1 (ENSACCG00020003114)	FZD7 (ENSACCG00020003104)	CDK15 (ENSACCG00020003085) #21	ALS2 (ENSACCG00020003034) #22	MPP4 (ENSACCG00020002955) #23	TMEM237 (ENSACCG00020002868) #24	STRADB (ENSACCG00020002846)	TRAK2 (ENSACCG00020002810)	CASP8 (ENSACCG00020002787)	ENSACCG00020002772	CASP10 (ENSACCG00020002753)	CFLAR (ENSACCG00020002739)	NDUFB3 (ENSACCG00020002722)	HYCC2 (ENSACCG00020002702)	ORC2 (ENSACCG00020002685)	NIF3L1 (ENSACCG00020002663)	ENSACCG00020002651	CLK1 (ENSACCG00020002621)	BZW1 (ENSACCG00020002605)
Kakapo	MODERN SPECIES	22	CPO (ENSSHBG00005002311)	KLF7 (ENSSHBG00005002296)	CREB1 (ENSSHBG00005002287)	METTL21A (ENSSHBG00005002278)	ENSSHBG00005002269	ENSSHBG00005002253	PLEKHM3 (ENSSHBG00005002232)	CARF (ENSSHBG00005002136)	WDR12 (ENSSHBG00005002114)	FAM117B (ENSSHBG00005002099)	BMPR2 (ENSSHBG00005002078)	NOP58 (ENSSHBG00005002029)	SUMO1 (ENSSHBG00005000263)	FZD7 (ENSSHBG00005000260)	CDK15 (ENSSHBG00005000256) #21	ALS2 (ENSSHBG00005000252) #22	ENSSHBG00005000246	MPP4 (ENSSHBG00005000222) #23	TMEM237 (ENSSHBG00005000210) #24	STRADB (ENSSHBG00005000206)	TRAK2 (ENSSHBG00005000199)	CASP8 (ENSSHBG00005000189)	ENSSHBG00005000177	ENSSHBG00005021047	CASP10 (ENSSHBG00005021045)	NDUFB3 (ENSSHBG00005021043)	HYCC2 (ENSSHBG00005021042)	ORC2 (ENSSHBG00005021041)	NIF3L1 (ENSSHBG00005021038)	PPIL3 (ENSSHBG00005021034)	CLK1 (ENSSHBG00005021033)
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00940000161508	ENSGT00940000155235	ENSGT00940000155408	ENSGT00940000157249	ENSGT00940000154453.b	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000163579	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.c.a
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00940000155235	ENSGT00940000155408	ENSGT00940000157249	ENSGT00940000154453.b	ENSGT00940000162639	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.c.a
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000155235	ENSGT00940000155408	ENSGT00940000157249	ENSGT00940000154453.b	ENSGT00940000162639	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.c.a
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00940000161508	ENSGT00940000155235	ENSGT00940000155408	ENSGT00940000157249	ENSGT00940000154453.b	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.c.a
Zebra finch	MODERN SPECIES	29	CPO (ENSTGUG00000010012)	KLF7 (ENSTGUG00000010017)	CREB1 (ENSTGUG00000021110)	METTL21A (ENSTGUG00000010049)	ENSTGUG00000010055	ENSTGUG00000010062	PLEKHM3 (ENSTGUG00000010067)	CARF (ENSTGUG00000010076)	WDR12 (ENSTGUG00000010086)	FAM117B (ENSTGUG00000010101)	BMPR2 (ENSTGUG00000010107)	NOP58 (ENSTGUG00000010124)	SUMO1 (ENSTGUG00000023148)	FZD7 (ENSTGUG00000010149)	CDK15 (ENSTGUG00000010151) #21	ALS2 (ENSTGUG00000010168) #22	MPP4 (ENSTGUG00000010238) #23	TMEM237 (ENSTGUG00000010245) #24	STRADB (ENSTGUG00000010255)	TRAK2 (ENSTGUG00000010267)	CASP8 (ENSTGUG00000026325)	ENSTGUG00000010299	CASP10 (ENSTGUG00000010306)	CFLAR (ENSTGUG00000010309)	NDUFB3 (ENSTGUG00000027597)	HYCC2 (ENSTGUG00000023035)	BZW1 (ENSTGUG00000010398)	ORC2 (ENSTGUG00000010352)	NIF3L1 (ENSTGUG00000010385)	PPIL3 (ENSTGUG00000010395)	AOX1 (ENSTGUG00000010409)
Common canary	MODERN SPECIES	8	KLF7 (ENSSCAG00000002434)	CREB1 (ENSSCAG00000002440)	METTL21A (ENSSCAG00000002451)	ENSSCAG00000002462	ENSSCAG00000002470	PLEKHM3 (ENSSCAG00000002482)	CARF (ENSSCAG00000002493)	WDR12 (ENSSCAG00000002510)	ENSSCAG00000002518	ENSSCAG00000002521	BMPR2 (ENSSCAG00000002534)	NOP58 (ENSSCAG00000002544)	SUMO1 (ENSSCAG00000002566)	FZD7 (ENSSCAG00000002572)	CDK15 (ENSSCAG00000002582) #21	ALS2 (ENSSCAG00000002597) #22	MPP4 (ENSSCAG00000002617) #23	TMEM237 (ENSSCAG00000002645) #24	STRADB (ENSSCAG00000002649)	TRAK2 (ENSSCAG00000002660)	CASP8 (ENSSCAG00000002673)	ENSSCAG00000002679	CASP10 (ENSSCAG00000002684)	CFLAR (ENSSCAG00000002692)	NDUFB3 (ENSSCAG00000002696)	HYCC2 (ENSSCAG00000002703)	ORC2 (ENSSCAG00000002715)	NIF3L1 (ENSSCAG00000002725)	PPIL3 (ENSSCAG00000002731)	BZW1 (ENSSCAG00000002739)	AOX1 (ENSSCAG00000002748)
Medium ground finch	MODERN SPECIES	1	KLF7 (ENSGFOG00000006789)	CREB1 (ENSGFOG00000006794)	METTL21A (ENSGFOG00000006799)	ENSGFOG00000006802	FZD5 (ENSGFOG00000006809)	PLEKHM3 (ENSGFOG00000006814)	CARF (ENSGFOG00000006822)	WDR12 (ENSGFOG00000006866)	ENSGFOG00000006921	FAM117B (ENSGFOG00000006926)	BMPR2 (ENSGFOG00000006939)	NOP58 (ENSGFOG00000006953)	SUMO1 (ENSGFOG00000006984)	FZD7 (ENSGFOG00000006992)	CDK15 (ENSGFOG00000006998) #21	ALS2 (ENSGFOG00000007025) #22	MPP4 (ENSGFOG00000007211) #23	TMEM237 (ENSGFOG00000000008) #24	STRADB (ENSGFOG00000000099)	TRAK2 (ENSGFOG00000000109)	CASP8 (ENSGFOG00000000120)	ENSGFOG00000000126	CASP10 (ENSGFOG00000000131)	CFLAR (ENSGFOG00000000133)	NDUFB3 (ENSGFOG00000000135)	HYCC2 (ENSGFOG00000000137)	ORC2 (ENSGFOG00000000142)	NIF3L1 (ENSGFOG00000000152)	PPIL3 (ENSGFOG00000000157)	BZW1 (ENSGFOG00000000164)	AOX1 (ENSGFOG00000000189)
Flycatcher	MODERN SPECIES	26	CPO (ENSFALG00000003980)	KLF7 (ENSFALG00000003989)	ENSFALG00000023985	CREB1 (ENSFALG00000003996)	METTL21A (ENSFALG00000004003)	ENSFALG00000027089	PLEKHM3 (ENSFALG00000004020)	CARF (ENSFALG00000004023)	WDR12 (ENSFALG00000004032)	FAM117B (ENSFALG00000004036)	BMPR2 (ENSFALG00000004047)	NOP58 (ENSFALG00000004052)	SUMO1 (ENSFALG00000022941)	FZD7 (ENSFALG00000015305)	CDK15 (ENSFALG00000004066) #21	ALS2 (ENSFALG00000004075) #22	MPP4 (ENSFALG00000004089) #23	TMEM237 (ENSFALG00000004109) #24	STRADB (ENSFALG00000004116)	TRAK2 (ENSFALG00000004122)	CASP8 (ENSFALG00000004124)	ENSFALG00000004128	CASP10 (ENSFALG00000004132)	CFLAR (ENSFALG00000004136)	NDUFB3 (ENSFALG00000004140)	HYCC2 (ENSFALG00000004144)	ENSFALG00000028144	NIF3L1 (ENSFALG00000024500)	PPIL3 (ENSFALG00000023399)	BZW1 (ENSFALG00000027684)	AOX1 (ENSFALG00000004179)
Great tit	MODERN SPECIES	27	CPO (ENSPMJG00000018259)	KLF7 (ENSPMJG00000018257)	CREB1 (ENSPMJG00000018256)	METTL21A (ENSPMJG00000018255)	ENSPMJG00000018252	ENSPMJG00000018250	PLEKHM3 (ENSPMJG00000018247)	CARF (ENSPMJG00000018244)	WDR12 (ENSPMJG00000018243)	FAM117B (ENSPMJG00000018242)	BMPR2 (ENSPMJG00000018240)	NOP58 (ENSPMJG00000018230)	SUMO1 (ENSPMJG00000018227)	FZD7 (ENSPMJG00000018222)	CDK15 (ENSPMJG00000018220) #21	ALS2 (ENSPMJG00000018217) #22	MPP4 (ENSPMJG00000018190) #23	TMEM237 (ENSPMJG00000018188) #24	STRADB (ENSPMJG00000018187)	TRAK2 (ENSPMJG00000018184)	CASP8 (ENSPMJG00000018179)	ENSPMJG00000018178	CASP10 (ENSPMJG00000018177)	CFLAR (ENSPMJG00000018176)	NDUFB3 (ENSPMJG00000018175)	HYCC2 (ENSPMJG00000018174)	ORC2 (ENSPMJG00000018173)	NIF3L1 (ENSPMJG00000018172)	ENSPMJG00000018171	BZW1 (ENSPMJG00000018170)	AOX1 (ENSPMJG00000004145)
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00940000161508	ENSGT00940000155235	ENSGT00940000155408.b	ENSGT00940000157249	ENSGT00940000154453.b.d	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Anatidae	ANCESTRAL SPECIES	10	ENSGT00940000161508	ENSGT00940000155235	ENSGT00940000155408.b	ENSGT00940000157249	ENSGT00940000154453.b.d	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000011570	ENSGT00940000161997.a	ENSGT01100000263556.a.a	ENSGT00950000182997.a.b.b.a	ENSGT00730000110871.a.a.a.b	ENSGT00390000011514	ENSGT00390000000747	ENSGT01090000259987.a.a.a	ENSGT00390000015709	ENSGT00940000155992	ENSGT00390000007989	ENSGT00950000183170.b.b	ENSGT00940000156322
Pink-footed goose	MODERN SPECIES	120	CPO (ENSABRG00000016806)	KLF7 (ENSABRG00000016797)	CREB1 (ENSABRG00000016788)	ENSABRG00000016786	ENSABRG00000016702	ENSABRG00000016686	PLEKHM3 (ENSABRG00000016681)	CARF (ENSABRG00000016665)	WDR12 (ENSABRG00000016630)	FAM117B (ENSABRG00000016605)	BMPR2 (ENSABRG00000016558)	NOP58 (ENSABRG00000016523)	SUMO1 (ENSABRG00000016513)	FZD7 (ENSABRG00000016510)	CDK15 (ENSABRG00000016478) #21	ALS2 (ENSABRG00000016154) #22	MPP4 (ENSABRG00000015774) #23	TMEM237 (ENSABRG00000015767) #24	LSS (ENSABRG00000015601)	S100B (ENSABRG00000015550)	ENSABRG00000015533	DIP2A (ENSABRG00000015208)	PCNT (ENSABRG00000015167)	C21orf58 (ENSABRG00000015157)	KMO (ENSABRG00000015152)	ITGB2 (ENSABRG00000015145)	ENSABRG00000015127	ENSABRG00000015109	ENSABRG00000015106
Duck	MODERN SPECIES	25	FASTKD2 (ENSAPLG00000006177)	CPO (ENSAPLG00000006729)	KLF7 (ENSAPLG00000006752)	CREB1 (ENSAPLG00000006786)	METTL21A (ENSAPLG00000007133)	ENSAPLG00000007167	ENSAPLG00000001632	PLEKHM3 (ENSAPLG00000007354)	CARF (ENSAPLG00000007561)	WDR12 (ENSAPLG00000007646)	FAM117B (ENSAPLG00000007980)	BMPR2 (ENSAPLG00000008092)	NOP58 (ENSAPLG00000008524)	SUMO1 (ENSAPLG00000025650)	CDK15 (ENSAPLG00000009047) #21	ALS2 (ENSAPLG00000009216) #22	MPP4 (ENSAPLG00000009743) #23	TMEM237 (ENSAPLG00000010261) #24	LSS (ENSAPLG00000010494)	S100B (ENSAPLG00000021518)	ENSAPLG00000019487	DIP2A (ENSAPLG00000011466)	PCNT (ENSAPLG00000013024)	KMO (ENSAPLG00000014014)	ITGB2 (ENSAPLG00000014857)	SLX9 (ENSAPLG00000015590)	ADARB1 (ENSAPLG00000015600)	POFUT2 (ENSAPLG00000015047)	MCM3AP (ENSAPLG00000015213)	ENSAPLG00000000885	ENSAPLG00000018473
Phasianidae	ANCESTRAL SPECIES	8	ENSGT00940000161508	ENSGT00940000155235	ENSGT00940000155408.b	ENSGT00940000157249	ENSGT00940000154453.b.d	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994.m	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Phasianidae_b	ANCESTRAL SPECIES	8	ENSGT00940000161508	ENSGT00940000155235	ENSGT00940000155408.b	ENSGT00940000157249	ENSGT00940000154453.b.d	ENSGT00940000161191.B	ENSGT00940000159743	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994.m	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Turkey	DUPLICATION
Turkey	MODERN SPECIES	27	KLF7 (ENSMGAG00000008396)	CREB1 (ENSMGAG00000008360)	METTL21A (ENSMGAG00000008350)	ENSMGAG00000008327	ENSMGAG00000016153	PLEKHM3 (ENSMGAG00000008315)	CARF (ENSMGAG00000008291)	WDR12 (ENSMGAG00000008240)	FAM117B (ENSMGAG00000008139)	BMPR2 (ENSMGAG00000008156)	NOP58 (ENSMGAG00000008189)	SUMO1 (ENSMGAG00000017685)	FZD7 (ENSMGAG00000008142)	CDK15 (ENSMGAG00000008119) #21	ENSMGAG00000017624 #22	ENSMGAG00000008034 #22	MPP4 (ENSMGAG00000007983) #23	TMEM237 (ENSMGAG00000007970) #24	STRADB (ENSMGAG00000007934)	TRAK2 (ENSMGAG00000007874)	CASP8 (ENSMGAG00000007846)	ENSMGAG00000007834	CASP10 (ENSMGAG00000007806)	CFLAR (ENSMGAG00000007778)	NDUFB3 (ENSMGAG00000007771)	HYCC2 (ENSMGAG00000007746)	ORC2 (ENSMGAG00000007673)	NIF3L1 (ENSMGAG00000007653)	PPIL3 (ENSMGAG00000007648)	CLK1 (ENSMGAG00000007598)	BZW1 (ENSMGAG00000007562)
Turkey	MODERN SPECIES	27	CPO (ENSMGAG00000008430)	KLF7 (ENSMGAG00000008396)	CREB1 (ENSMGAG00000008360)	METTL21A (ENSMGAG00000008350)	ENSMGAG00000008327	ENSMGAG00000016153	PLEKHM3 (ENSMGAG00000008315)	CARF (ENSMGAG00000008291)	WDR12 (ENSMGAG00000008240)	FAM117B (ENSMGAG00000008139)	BMPR2 (ENSMGAG00000008156)	NOP58 (ENSMGAG00000008189)	SUMO1 (ENSMGAG00000017685)	FZD7 (ENSMGAG00000008142)	CDK15 (ENSMGAG00000008119) #21	ENSMGAG00000017624 #22	ENSMGAG00000008034 #22	MPP4 (ENSMGAG00000007983) #23	TMEM237 (ENSMGAG00000007970) #24	STRADB (ENSMGAG00000007934)	TRAK2 (ENSMGAG00000007874)	CASP8 (ENSMGAG00000007846)	ENSMGAG00000007834	CASP10 (ENSMGAG00000007806)	CFLAR (ENSMGAG00000007778)	NDUFB3 (ENSMGAG00000007771)	HYCC2 (ENSMGAG00000007746)	ORC2 (ENSMGAG00000007673)	NIF3L1 (ENSMGAG00000007653)	PPIL3 (ENSMGAG00000007648)	CLK1 (ENSMGAG00000007598)
Chicken	MODERN SPECIES	36	FASTKD2 (ENSGALG00010025869)	CPO (ENSGALG00010025855)	KLF7 (ENSGALG00010025822)	CREB1 (ENSGALG00010025351)	METTL21A (ENSGALG00010025340)	FZD5 (ENSGALG00010025333)	PLEKHM3 (ENSGALG00010025312)	CARF (ENSGALG00010025262)	WDR12 (ENSGALG00010025233)	FAM117B (ENSGALG00010025222)	BMPR2 (ENSGALG00010025207)	NOP58 (ENSGALG00010025157)	SUMO1 (ENSGALG00010025131)	FZD7 (ENSGALG00010026264)	CDK15 (ENSGALG00010025071) #21	ALS2 (ENSGALG00010025055) #22	MPP4 (ENSGALG00010024947) #23	TMEM237 (ENSGALG00010024930) #24	STRADB (ENSGALG00010024921)	TRAK2 (ENSGALG00010024917)	CASP8 (ENSGALG00010024903)	CASP18 (ENSGALG00010024887)	CASP10 (ENSGALG00010024881)	CFLAR (ENSGALG00010024876)	NDUFB3 (ENSGALG00010024869)	HYCC2 (ENSGALG00010024845)	ORC2 (ENSGALG00010024830)	NIF3L1 (ENSGALG00010024811)	PPIL3 (ENSGALG00010024807)	CLK1 (ENSGALG00010024803)	BZW1 (ENSGALG00010024792)
Japanese quail	MODERN SPECIES	25	KLF7 (ENSCJPG00005015354)	CREB1 (ENSCJPG00005015351)	METTL21A (ENSCJPG00005015350)	ENSCJPG00005015349	ENSCJPG00005015348	PLEKHM3 (ENSCJPG00005015346)	CARF (ENSCJPG00005015344)	WDR12 (ENSCJPG00005015343)	FAM117B (ENSCJPG00005015342)	BMPR2 (ENSCJPG00005015341)	NOP58 (ENSCJPG00005015334)	SUMO1 (ENSCJPG00005015331)	ENSCJPG00005015329	FZD7 (ENSCJPG00005015328)	CDK15 (ENSCJPG00005015326) #21	ALS2 (ENSCJPG00005015296) #22	MPP4 (ENSCJPG00005015295) #23	TMEM237 (ENSCJPG00005015294) #24	STRADB (ENSCJPG00005015293)	TRAK2 (ENSCJPG00005015247)	CASP8 (ENSCJPG00005015246)	ENSCJPG00005015245	ENSCJPG00005015244	ENSCJPG00005015243	CFLAR (ENSCJPG00005015242)	NDUFB3 (ENSCJPG00005015241)	HYCC2 (ENSCJPG00005015237)	ORC2 (ENSCJPG00005015236)	PPIL3 (ENSCJPG00005015235)	NIF3L1 (ENSCJPG00005015111)	CLK1 (ENSCJPG00005015110)
African ostrich	MODERN SPECIES	942											ENSSCUG00000016285	BMPR2 (ENSSCUG00000016286)	NOP58 (ENSSCUG00000016291)	SUMO1 (ENSSCUG00000016297)	CDK15 (ENSSCUG00000016301) #21	ALS2 (ENSSCUG00000016313) #22	MPP4 (ENSSCUG00000016358) #23	TMEM237 (ENSSCUG00000016409) #24	STRADB (ENSSCUG00000016412)	TRAK2 (ENSSCUG00000016418)	CASP8 (ENSSCUG00000016432)	ENSSCUG00000016436	CASP10 (ENSSCUG00000016442)	CFLAR (ENSSCUG00000016446)	NDUFB3 (ENSSCUG00000016453)	HYCC2 (ENSSCUG00000016462)	ORC2 (ENSSCUG00000016468)	NIF3L1 (ENSSCUG00000016470)	PPIL3 (ENSSCUG00000016471)	CLK1 (ENSSCUG00000016472)	BZW1 (ENSSCUG00000016473)
Australian saltwater crocodile	MODERN SPECIES	66	RAPH1 (ENSCPRG00005001588)	ABI2 (ENSCPRG00005001556)	CYP20A1 (ENSCPRG00005001526)	ENSCPRG00005001521	NBEAL1 (ENSCPRG00005001495)	ENSCPRG00005001474	CARF (ENSCPRG00005001462)	WDR12 (ENSCPRG00005001450)	ENSCPRG00005001426	FAM117B (ENSCPRG00005001420)	BMPR2 (ENSCPRG00005001396)	NOP58 (ENSCPRG00005001353)	SUMO1 (ENSCPRG00005001337)	FZD7 (ENSCPRG00005001330)	CDK15 (ENSCPRG00005001304) #21	ALS2 (ENSCPRG00005001283) #22	MPP4 (ENSCPRG00005001214) #23	TMEM237 (ENSCPRG00005001157) #24	GOSR2 (ENSCPRG00005001143)	WNT9B (ENSCPRG00005001132)	WNT3 (ENSCPRG00005001110)	NSF (ENSCPRG00005001086)	MEIOC (ENSCPRG00005001066)	CCDC43 (ENSCPRG00005001033)	ENSCPRG00005001026	NAGLU (ENSCPRG00005001014)	HSD17B1 (ENSCPRG00005000974)	COASY (ENSCPRG00005000958)	ENSCPRG00005000952	ENSCPRG00005000948	SMARCD2 (ENSCPRG00005000943)
Cryptodira	ANCESTRAL SPECIES	5	ENSGT00940000176171	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00950000185065	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B
Testudinoidea	ANCESTRAL SPECIES	11	ENSGT00940000176171	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00950000185065	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Emydidae	ANCESTRAL SPECIES	4	ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00950000185065	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722
Three-toed box turtle	MODERN SPECIES	25	CD28 (ENSTMTG00000000707)	RAPH1 (ENSTMTG00000000330)	ABI2 (ENSTMTG00000000124)	ENSTMTG00000000064	NBEAL1 (ENSTMTG00000011535)	ENSTMTG00000011258	CARF (ENSTMTG00000011136)	WDR12 (ENSTMTG00000011113)	ICA1L (ENSTMTG00000011077)	FAM117B (ENSTMTG00000011056)	BMPR2 (ENSTMTG00000011025)	NOP58 (ENSTMTG00000010944)	SUMO1 (ENSTMTG00000010925)	FZD7 (ENSTMTG00000010912)	CDK15 (ENSTMTG00000010659) #21	ALS2 (ENSTMTG00000010542) #22	MPP4 (ENSTMTG00000010162) #23	TMEM237 (ENSTMTG00000010099) #24	STRADB (ENSTMTG00000010068)	TRAK2 (ENSTMTG00000009961)	CASP8 (ENSTMTG00000009929)	ENSTMTG00000009900	CASP10 (ENSTMTG00000009875)	CFLAR (ENSTMTG00000009842)	NDUFB3 (ENSTMTG00000009826)	HYCC2 (ENSTMTG00000009797)	ORC2 (ENSTMTG00000009760)	NIF3L1 (ENSTMTG00000009742)	PPIL3 (ENSTMTG00000009721)	CLK1 (ENSTMTG00000009691)	BZW1 (ENSTMTG00000009663)
painted turtle	MODERN SPECIES	2	CYP20A1 (ENSCPBG00000008879)	ENSCPBG00000008883	NBEAL1 (ENSCPBG00000008970)	ENSCPBG00000011238	CARF (ENSCPBG00000011242)	WDR12 (ENSCPBG00000011256)	ICA1L (ENSCPBG00000011260)	ENSCPBG00000011283	ENSCPBG00000011285	BMPR2 (ENSCPBG00000011298)	NOP58 (ENSCPBG00000011565)	SUMO1 (ENSCPBG00000011575)	KIAA2012 (ENSCPBG00000011578)	FZD7 (ENSCPBG00000011582)	CDK15 (ENSCPBG00000011587) #21	ALS2 (ENSCPBG00000011591) #22	MPP4 (ENSCPBG00000011594) #23	TMEM237 (ENSCPBG00000011689) #24	ENSCPBG00000011694	STRADB (ENSCPBG00000011698)	TRAK2 (ENSCPBG00000011705)	FLACC1 (ENSCPBG00000011709)	CASP8 (ENSCPBG00000011716)	ENSCPBG00000011719	ENSCPBG00000011723	NDUFB3 (ENSCPBG00000011726)	HYCC2 (ENSCPBG00000011729)	ORC2 (ENSCPBG00000011736)	NIF3L1 (ENSCPBG00000011743)	PPIL3 (ENSCPBG00000011745)	CLK1 (ENSCPBG00000011747)
Testudinidae	ANCESTRAL SPECIES	8	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00950000185065	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000164225	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.d	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Goode s thornscrub tortoise	MODERN SPECIES	2	ABI2 (ENSGEVG00005007221)	ENSGEVG00005007253	CYP20A1 (ENSGEVG00005007271)	ENSGEVG00005007312	NBEAL1 (ENSGEVG00005007841)	ENSGEVG00005011079	CARF (ENSGEVG00005011158)	WDR12 (ENSGEVG00005011195)	ICA1L (ENSGEVG00005011235)	FAM117B (ENSGEVG00005011292)	BMPR2 (ENSGEVG00005011391)	NOP58 (ENSGEVG00005011819)	SUMO1 (ENSGEVG00005011902)	FZD7 (ENSGEVG00005011937)	CDK15 (ENSGEVG00005011981) #21	ALS2 (ENSGEVG00005012121) #22	MPP4 (ENSGEVG00005012348) #23	TMEM237 (ENSGEVG00005012993) #24	STRADB (ENSGEVG00005013022)	TRAK2 (ENSGEVG00005013111)	CASP8 (ENSGEVG00005013203)	ENSGEVG00005013257	CASP10 (ENSGEVG00005013305)	CFLAR (ENSGEVG00005013349)	ENSGEVG00005013378	HYCC2 (ENSGEVG00005013408)	ORC2 (ENSGEVG00005013508)	NIF3L1 (ENSGEVG00005013708)	PPIL3 (ENSGEVG00005013737)	CLK1 (ENSGEVG00005013766)	BZW1 (ENSGEVG00005013813)
Abingdon island giant tortoise	MODERN SPECIES	2099													NOP58 (ENSCABG00000011580)	SUMO1 (ENSCABG00000011584)	CDK15 (ENSCABG00000011592) #21	ALS2 (ENSCABG00000011606) #22	MPP4 (ENSCABG00000011988) #23	TMEM237 (ENSCABG00000012125) #24	STRADB (ENSCABG00000012127)	TRAK2 (ENSCABG00000012129)	ENSCABG00000012169	CASP8 (ENSCABG00000012170)	ENSCABG00000012181	CASP10 (ENSCABG00000012183)	CFLAR (ENSCABG00000012186)	ENSCABG00000012188	HYCC2 (ENSCABG00000012190)	ORC2 (ENSCABG00000012349)	NIF3L1 (ENSCABG00000012350)	PPIL3 (ENSCABG00000012386)	CLK1 (ENSCABG00000012388)
Chinese turtle	MODERN SPECIES	1653									BMPR2 (ENSPSIG00000013650)	NOP58 (ENSPSIG00000011773)	SUMO1 (ENSPSIG00000011513)	ENSPSIG00000011127	ENSPSIG00000010428	FZD7 (ENSPSIG00000010126)	CDK15 (ENSPSIG00000009784) #21	ALS2 (ENSPSIG00000011464) #22	MPP4 (ENSPSIG00000010356) #23
Lepidosauria	ANCESTRAL SPECIES	7	ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000003964.b	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Episquamata	ANCESTRAL SPECIES		ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160994	ENSGT00530000064199.k	ENSGT00530000064199.l	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b
Laterata	ANCESTRAL SPECIES	42	ENSGT00530000063873.B	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00950000183314	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160994	ENSGT00530000064199.k	ENSGT00530000064199.l	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.c.b
Common wall lizard	MODERN SPECIES		RAPH1 (ENSPMRG00000008789)	ABI2 (ENSPMRG00000008747)	CYP20A1 (ENSPMRG00000008728)	NBEAL1 (ENSPMRG00000007358)	ENSPMRG00000006930	CARF (ENSPMRG00000006921)	ENSPMRG00000006909	WDR12 (ENSPMRG00000006856)	ENSPMRG00000006842	ENSPMRG00000006832	BMPR2 (ENSPMRG00000006815)	NOP58 (ENSPMRG00000006794)	ENSPMRG00000006788	FZD7 (ENSPMRG00000006785)	CDK15 (ENSPMRG00000006777) #21	ALS2 (ENSPMRG00000006747) #22	MPP4 (ENSPMRG00000006532) #23	ENSPMRG00000006458	GTF3C3 (ENSPMRG00000006178)	PGAP1 (ENSPMRG00000006002)	ANKRD44 (ENSPMRG00000005384)	SF3B1 (ENSPMRG00000005261)	COQ10B (ENSPMRG00000005252)	ENSPMRG00000005220	ENSPMRG00000005210	MOB4 (ENSPMRG00000005201)	RFTN2 (ENSPMRG00000005194)	BOLL (ENSPMRG00000005191)	PLCL1 (ENSPMRG00000005188)	ENSPMRG00000005184	SATB2 (ENSPMRG00000005180)
Argentine black and white tegu	MODERN SPECIES	12	RAPH1 (ENSSMRG00000020776)	ABI2 (ENSSMRG00000020777)	CYP20A1 (ENSSMRG00000020778)	ENSSMRG00000020779	NBEAL1 (ENSSMRG00000020780)	ENSSMRG00000020781	WDR12 (ENSSMRG00000020782)	FAM117B (ENSSMRG00000020783)	BMPR2 (ENSSMRG00000020784)	NOP58 (ENSSMRG00000020786)	SUMO1 (ENSSMRG00000020789)	KIAA2012 (ENSSMRG00000020790)	ENSSMRG00000020791	FZD7 (ENSSMRG00000020792)	CDK15 (ENSSMRG00000020794) #21	ALS2 (ENSSMRG00000020795) #22	MPP4 (ENSSMRG00000020796) #23	TMEM237 (ENSSMRG00000020798) #24	ENSSMRG00000020799	STRADB (ENSSMRG00000020800)	ENSSMRG00000020801	ENSSMRG00000020802	ENSSMRG00000020804	ENSSMRG00000020807	UNC80 (ENSSMRG00000020808)	ENSSMRG00000020815	KANSL1L (ENSSMRG00000020816)	ACADL (ENSSMRG00000020817)	MYL1 (ENSSMRG00000020818)	LANCL1 (ENSSMRG00000020819)	CPS1 (ENSSMRG00000020820)
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000003964.b	ENSGT00950000185065	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00390000018209	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160994	ENSGT00530000064199.k	ENSGT00530000064199.l	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000163579	ENSGT00940000159722	ENSGT00390000012561.b
Elapidae	ANCESTRAL SPECIES		ENSGT00940000156552	ENSGT00940000156089.g	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000003964.b	ENSGT00950000185065	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160994	ENSGT00530000064199.k	ENSGT00530000064199.l	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000163579	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.c.b
Indian cobra	MODERN SPECIES		CD28 (ENSNNAG00000007953)	RAPH1 (ENSNNAG00000007996)	ABI2 (ENSNNAG00000008284)	CYP20A1 (ENSNNAG00000008325)	ENSNNAG00000008350	NBEAL1 (ENSNNAG00000008400)	ENSNNAG00000008600	WDR12 (ENSNNAG00000008654)	FAM117B (ENSNNAG00000008713)	BMPR2 (ENSNNAG00000008749)	NOP58 (ENSNNAG00000008788)	SUMO1 (ENSNNAG00000008916)	ENSNNAG00000008934	FZD7 (ENSNNAG00000008987)	CDK15 (ENSNNAG00000009009) #21	ENSNNAG00000009075 #22	MPP4 (ENSNNAG00000009104) #23	TMEM237 (ENSNNAG00000009398) #24	STRADB (ENSNNAG00000009431)	TRAK2 (ENSNNAG00000009496)	CASP10 (ENSNNAG00000009584)	CFLAR (ENSNNAG00000009607)	NDUFB3 (ENSNNAG00000009702)	HYCC2 (ENSNNAG00000009742)	ORC2 (ENSNNAG00000009852)	NIF3L1 (ENSNNAG00000009910)	ENSNNAG00000009941	CLK1 (ENSNNAG00000009956)	BZW1 (ENSNNAG00000010016)	AOX1 (ENSNNAG00000010279)	KCTD18 (ENSNNAG00000014023)
Elapidae_a	ANCESTRAL SPECIES	5	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089.g	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041.k	ENSGT00390000003964.b	ENSGT00950000185065	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160994	ENSGT00530000064199.k	ENSGT00530000064199.l	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000163579	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.c.b
Acanthophiinae	ANCESTRAL SPECIES	7	ENSGT00530000063873.B	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089.g	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041.k	ENSGT00390000003964.b	ENSGT00930000150950.b	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00940000155390	ENSGT00940000158202	ENSGT00940000160994	ENSGT00530000064199.k	ENSGT00530000064199.l	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000163579	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.c.b
Eastern brown snake	MODERN SPECIES	7	ENSPTXG00000000517	RAPH1 (ENSPTXG00000000537)	ABI2 (ENSPTXG00000000562)	ENSPTXG00000000572	NBEAL1 (ENSPTXG00000000682)	ENSPTXG00000001453	ENSPTXG00000001457	ENSPTXG00000001462	WDR12 (ENSPTXG00000001465)	FAM117B (ENSPTXG00000001469)	BMPR2 (ENSPTXG00000001478)	NOP58 (ENSPTXG00000001936)	SUMO1 (ENSPTXG00000001946)	FZD7 (ENSPTXG00000001949)	CDK15 (ENSPTXG00000001951) #21	ALS2 (ENSPTXG00000001954) #22	MPP4 (ENSPTXG00000001960) #23	TMEM237 (ENSPTXG00000002623) #24	STRADB (ENSPTXG00000002626)	TRAK2 (ENSPTXG00000002629)	CASP10 (ENSPTXG00000002635)	ENSPTXG00000002638	ENSPTXG00000002639	NDUFB3 (ENSPTXG00000002643)	HYCC2 (ENSPTXG00000002649)	ORC2 (ENSPTXG00000002651)	NIF3L1 (ENSPTXG00000002654)	ENSPTXG00000002657	CLK1 (ENSPTXG00000002661)	BZW1 (ENSPTXG00000002667)	AOX1 (ENSPTXG00000002704)
Mainland tiger snake	MODERN SPECIES	150	ENSNSUG00000009322	ENSNSUG00000009323	RAPH1 (ENSNSUG00000009331)	ABI2 (ENSNSUG00000009335)	CYP20A1 (ENSNSUG00000009346)	ENSNSUG00000009347	ENSNSUG00000009348	ENSNSUG00000009349	WDR12 (ENSNSUG00000009351)	FAM117B (ENSNSUG00000009353)	BMPR2 (ENSNSUG00000009356)	NOP58 (ENSNSUG00000009368)	SUMO1 (ENSNSUG00000009373)	FZD7 (ENSNSUG00000009374)	CDK15 (ENSNSUG00000009376) #21	ALS2 (ENSNSUG00000009379) #22	MPP4 (ENSNSUG00000009382) #23	ENSNSUG00000009603	STRADB (ENSNSUG00000009604)
Blue-lipped sea krait	MODERN SPECIES	1038																ALS2 (ENSLLTG00000005360) #22
Lizard	MODERN SPECIES	1090															CDK15 (ENSACAG00000000560) #21	ALS2 (ENSACAG00000000724) #22	ENSACAG00000001108 #23	TMEM237 (ENSACAG00000001296) #24	ENSACAG00000036505	STRADB (ENSACAG00000001347)	TRAK2 (ENSACAG00000001412)	CASP10 (ENSACAG00000001713)	CFLAR (ENSACAG00000001747)	ENSACAG00000041240	NDUFB3 (ENSACAG00000001777)	HYCC2 (ENSACAG00000001779)	ORC2 (ENSACAG00000001915)
tuatara	MODERN SPECIES	1814														CDK15 (ENSSPUG00000004232) #21	ENSSPUG00000004156	ALS2 (ENSSPUG00000003853) #22	MPP4 (ENSSPUG00000003567) #23	TMEM237 (ENSSPUG00000003502) #24	ENSSPUG00000003484	STRADB (ENSSPUG00000003477)	TRAK2 (ENSSPUG00000003462)	ENSSPUG00000003445	ENSSPUG00000003440	ENSSPUG00000003434	CASP10 (ENSSPUG00000003417)	CFLAR (ENSSPUG00000003396)	NDUFB3 (ENSSPUG00000003387)	HYCC2 (ENSSPUG00000003211)	ORC2 (ENSSPUG00000003152)	NIF3L1 (ENSSPUG00000003130)	PPIL3 (ENSSPUG00000003113)
Anura	ANCESTRAL SPECIES	39	ENSGT00940000156552	ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000017619	ENSGT00940000155041	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24
Frog	MODERN SPECIES	9	aox1 (ENSXETG00000034468)	slc39a10 (ENSXETG00000022134)	dnah7 (ENSXETG00000022093)	nbeal1 (ENSXETG00000022086)	carf (ENSXETG00000031604)	wdr12 (ENSXETG00000022077)	fam117b (ENSXETG00000022076)	bmpr2 (ENSXETG00000022074)	nop58 (ENSXETG00000022073)	sumo1 (ENSXETG00000022072)	kiaa2012 (ENSXETG00000041127)	fzd7 (ENSXETG00000012404)	ENSXETG00000040147	ENSXETG00000037714	cdk15 (ENSXETG00000012405) #21	als2 (ENSXETG00000012406) #22	ICOS (ENSXETG00000040525)	pard3b (ENSXETG00000012407)	nrp2 (ENSXETG00000010095)	ENSXETG00000048152	ino80d (ENSXETG00000033629)	eef1b2 (ENSXETG00000010098)	ndufs1 (ENSXETG00000010108)	cops8 (ENSXETG00000025427)	cmklr2 (ENSXETG00000043302)	ENSXETG00000042410	ENSXETG00000046685	adam23 (ENSXETG00000010118)	ENSXETG00000044734	mdh1b (ENSXETG00000034073)	fastkd2 (ENSXETG00000031283)
Leishan spiny toad	MODERN SPECIES	10	CASP10 (ENSLLEG00000020096)	ENSLLEG00000020069	ENSLLEG00000019931	ENSLLEG00000019795	CASP8 (ENSLLEG00000019623)	ENSLLEG00000019343	ENSLLEG00000019060	ENSLLEG00000019013	ENSLLEG00000018758	STRADB (ENSLLEG00000018633)	ENSLLEG00000018606	ENSLLEG00000018581	ENSLLEG00000017086	FZD7 (ENSLLEG00000016908)	CDK15 (ENSLLEG00000016753) #21	ALS2 (ENSLLEG00000016168) #22	MPP4 (ENSLLEG00000015857) #23	ENSLLEG00000015748	SUMO1 (ENSLLEG00000015593)	NOP58 (ENSLLEG00000015076)	BMPR2 (ENSLLEG00000014925)	FAM117B (ENSLLEG00000014783)	ICA1L (ENSLLEG00000014714)	WDR12 (ENSLLEG00000014364)	CARF (ENSLLEG00000013266)	NBEAL1 (ENSLLEG00000011871)	ENSLLEG00000011716	CYP20A1 (ENSLLEG00000011493)	ENSLLEG00000011462	ABI2 (ENSLLEG00000010961)	RAPH1 (ENSLLEG00000010703)
Coelacanth	MODERN SPECIES	479							ICA1L (ENSLACG00000016692)	FAM117B (ENSLACG00000016010)	BMPR2 (ENSLACG00000015107)	NOP58 (ENSLACG00000014882)	ENSLACG00000014628	ENSLACG00000014442	ENSLACG00000014338	FZD7 (ENSLACG00000014068)	CDK15 (ENSLACG00000012204) #21	ALS2 (ENSLACG00000010844) #22	ENSLACG00000010687	MPP4 (ENSLACG00000010181) #23	ENSLACG00000009994	TMEM237 (ENSLACG00000009546) #24	ENSLACG00000022406	STRADB (ENSLACG00000007552)	TRAK2 (ENSLACG00000006273)	ENSLACG00000022324	ENSLACG00000004220	ENSLACG00000003502	CASP10 (ENSLACG00000001849)
Actinopterygii	ANCESTRAL SPECIES	116						ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT01030000234607.A.b	ENSGT00530000063410.b	ENSGT00940000162403	ENSGT00390000015769.B	ENSGT00940000158781	ENSGT00940000160642	ENSGT00950000183014.f.a
Reedfish	MODERN SPECIES	16	STRADB (ENSECRG00000007160)	si:dkey-69o16.5 (ENSECRG00000007152)	NBEAL1 (ENSECRG00000007092)	bmpr2a (ENSECRG00000007028)	FAM117B (ENSECRG00000007001)	ENSECRG00000006985	ical1 (ENSECRG00000006974)	wdr12 (ENSECRG00000006956)	ENSECRG00000006943	CARF (ENSECRG00000006931)	nop58 (ENSECRG00000006903)	sumo1 (ENSECRG00000006886)	ENSECRG00000006871	fzd7a (ENSECRG00000006864)	cdk15 (ENSECRG00000006849) #21	ALS2 (ENSECRG00000006808) #22	MPP4 (ENSECRG00000006757) #23	tmem237b (ENSECRG00000006739) #24	ENSECRG00000006727	cyp20a1 (ENSECRG00000006712)	abi2b (ENSECRG00000006679)	raph1b (ENSECRG00000006637)	CTLA4 (ENSECRG00000006618)	FASTKD2 (ENSECRG00000006608)	mdh1b (ENSECRG00000006596)	FAM237A (ENSECRG00000006588)	ADAM23 (ENSECRG00000006567)	CMKLR2 (ENSECRG00000006553)	eef1b2 (ENSECRG00000006546)	ndufs1 (ENSECRG00000006523)	ino80db (ENSECRG00000006513)
Neopterygii	ANCESTRAL SPECIES	61	ENSGT00940000155522	ENSGT00390000016940.c.b	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000164964.b	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000172395	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00390000009001	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT01030000234607.A.b	ENSGT00530000063410.b
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	178					ENSGT00940000164964.b	ENSGT00940000156449	ENSGT00950000183046.a.a.gb	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT01090000263180	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.a.b	ENSGT00940000159606 #21	ENSGT00940000155861.C.e #22	ENSGT00940000156444 #23	ENSGT00390000005159 #24	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552.c.a	ENSGT00940000178309	ENSGT00530000063873.B	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00390000000862	ENSGT00940000156160	ENSGT00940000155270	ENSGT00950000183214.a.b.a.b.f.b	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000161508.a
Clupeocephala	ANCESTRAL SPECIES	322		ENSGT00940000157904.a.a	ENSGT00940000153476.b.o.b	ENSGT00940000155995.e.a	ENSGT00940000155972.A	ENSGT00940000156449.b.a	ENSGT00950000183046.a.a.gb	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT01090000263180	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.a.b	ENSGT00940000159606 #21	ENSGT00940000155861.C.e #22
Euteleosteomorpha	ANCESTRAL SPECIES	6	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a	ENSGT00950000182895.a.b.u.b	ENSGT00940000158193	ENSGT00510000047718.d	ENSGT00980000199010	ENSGT00940000156449.a	ENSGT00950000183046.a.a.fb	ENSGT00390000013916	ENSGT00940000154319	ENSGT00940000158239.a.b	ENSGT00940000159606 #21	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089.e.a	ENSGT00950000183115.b.a.m.b
Acanthomorphata	ANCESTRAL SPECIES	140	ENSGT00940000155009.b	ENSGT00390000009940	ENSGT00940000164444.b	ENSGT00950000182882.A.b.b.f	ENSGT00950000183165.b.a.e.a	ENSGT00950000183165.b.a.e.b.d.b	ENSGT00940000154095.b.b.a.a	ENSGT00390000003164	ENSGT00940000155522.g.b	ENSGT00390000016940.c.b.b	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000156884	ENSGT00940000154319	ENSGT00940000158239.a.b	ENSGT00940000159606 #21	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a
Euacanthomorphacea	ANCESTRAL SPECIES	26	ENSGT00950000183138.a.b.r.a	ENSGT00940000166042.a	ENSGT01090000260051.b.b.dc.a	ENSGT00940000154365.a.b	ENSGT00940000154793.C	ENSGT00390000007364.j	ENSGT00940000155984.i.b	ENSGT00940000159862.b	ENSGT00940000159213.q.b	ENSGT00940000154817.b.b.b.p	ENSGT00940000165301.b	ENSGT00940000158265	ENSGT00940000164897.a.b	ENSGT00940000158239.b	ENSGT00940000159606 #21	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089.e.a	ENSGT00940000156089.f	ENSGT00940000155212.ab.a	ENSGT00390000005717.s	ENSGT00940000154319	ENSGT00940000156884	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00390000016940.c.b.b	ENSGT00940000155522.g.b	ENSGT00390000003164	ENSGT00940000154095.b.b.a.a
Percomorphaceae	ANCESTRAL SPECIES	22	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089.e.a	ENSGT00940000165423.a.b	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000178373	ENSGT01030000235131	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Percomorphaceae_B	ANCESTRAL SPECIES	22	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000178373	ENSGT01030000235131	ENSGT00940000155773.a	ENSGT00940000158539.b
Ovalentaria	ANCESTRAL SPECIES	23	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000178373	ENSGT01030000235131	ENSGT00940000155773.a	ENSGT00940000158539.b
Atherinomorphae	ANCESTRAL SPECIES	24	ENSGT00940000168325	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000178373	ENSGT01030000235131	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542
Cyprinodontiformes	ANCESTRAL SPECIES	26	ENSGT00940000177931	ENSGT00940000168325	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000178373	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Cyprinodontoidei	ANCESTRAL SPECIES	26	ENSGT00940000177931	ENSGT00940000168325	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00940000154342.C	ENSGT00530000063484.b.b.d.b	ENSGT01060000248575.D.c.b.a.a	ENSGT00940000163254	ENSGT00390000003758	ENSGT00940000153534.A	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.b.a	ENSGT00940000176946.a
NAME_4	ANCESTRAL SPECIES	90	ENSGT00940000177931	ENSGT00940000168325	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00940000154342.C	ENSGT00530000063484.b.b.d.b	ENSGT00940000163254
Mummichog	MODERN SPECIES	2385					eed (ENSFHEG00000016575)	ATP7B (ENSFHEG00000016584)	LRRC3 (ENSFHEG00000000887)	ENSFHEG00000016615	ENSFHEG00000016665	gpd2 (ENSFHEG00000016695)	NR4A2 (ENSFHEG00000016790)	ENSFHEG00000016803	ENSFHEG00000017707	ENSFHEG00000017960	inpp4ab (ENSFHEG00000018010)	ALS2 (ENSFHEG00000018208) #22	MPP4 (ENSFHEG00000018412) #23	tmem237b (ENSFHEG00000018428) #24	cyp20a1 (ENSFHEG00000018443)	abi2b (ENSFHEG00000018481)	dmd (ENSFHEG00000019360)	ENSFHEG00000019459	tmem47 (ENSFHEG00000019497)	ENSFHEG00000019526	gtf3c3 (ENSFHEG00000019622)	HECW2 (ENSFHEG00000019687)	ENSFHEG00000019700	ENSFHEG00000019794	cryaa (ENSFHEG00000019885)	ENSFHEG00000019893	ENSFHEG00000019907
Sheepshead minnow	MODERN SPECIES	265	ENSCVAG00000014163	ENSCVAG00000014333	pwp2h (ENSCVAG00000000996)	eed (ENSCVAG00000014409)	ATP7B (ENSCVAG00000014446)	ENSCVAG00000014466	LRRC3 (ENSCVAG00000014472)	ENSCVAG00000014482	ENSCVAG00000014489	gpd2 (ENSCVAG00000014507)	NR4A2 (ENSCVAG00000014515)	ENSCVAG00000014521	ENSCVAG00000014674	ENSCVAG00000014684	inpp4ab (ENSCVAG00000014936)	ENSCVAG00000014968 #22	MPP4 (ENSCVAG00000015060) #23	ENSCVAG00000015075	tmem237b (ENSCVAG00000015114) #24	cyp20a1 (ENSCVAG00000015170)	abi2b (ENSCVAG00000015289)
Poeciliinae	ANCESTRAL SPECIES	23	ENSGT00940000165235.a.a	ENSGT00940000168325	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00940000154342.C	ENSGT00530000063484.b.b.d.b	ENSGT01060000248575.D.c.b.a.a	ENSGT00940000163254	ENSGT00390000003758	ENSGT00940000153534.A	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.b.a	ENSGT00940000176946.a
Poecilia	ANCESTRAL SPECIES	45	ENSGT00940000165235.a.a	ENSGT00940000155675.p.b	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00940000154342.C	ENSGT00530000063484.b.b.d.b	ENSGT01060000248575.D.c.b.a.a	ENSGT00940000163254	ENSGT00390000003758	ENSGT00940000153534.A	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.b.a	ENSGT00940000176946.a
NAME_6	ANCESTRAL SPECIES	358										ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a
Sailfin molly	MODERN SPECIES	945									ENSPLAG00000016026	gpd2 (ENSPLAG00000016007)	NR4A2 (ENSPLAG00000015941)	ENSPLAG00000015938	ENSPLAG00000015909	SLC9A2 (ENSPLAG00000015885)	inpp4ab (ENSPLAG00000015758)	ALS2 (ENSPLAG00000015574) #22	MPP4 (ENSPLAG00000015413) #23	tmem237b (ENSPLAG00000000355) #24	cyp20a1 (ENSPLAG00000015380)	abi2b (ENSPLAG00000000353)	dmd (ENSPLAG00000015325)
Amazon molly	MODERN SPECIES	475											NR4A2 (ENSPFOG00000024542)	ENSPFOG00000002763	ENSPFOG00000002912	SLC9A2 (ENSPFOG00000003685)	inpp4ab (ENSPFOG00000003805)	ALS2 (ENSPFOG00000004501) #22	MPP4 (ENSPFOG00000023901) #23	tmem237b (ENSPFOG00000005007) #24	cyp20a1 (ENSPFOG00000024562)	abi2b (ENSPFOG00000005072)	dmd (ENSPFOG00000005333)
Guppy	MODERN SPECIES	450	ENSPREG00000016172	COL5A2 (ENSPREG00000015993)	ENSPREG00000015932	pwp2h (ENSPREG00000015887)	eed (ENSPREG00000015809)	ATP7B (ENSPREG00000015767)	LRRC3 (ENSPREG00000015757)	ENSPREG00000015736	ENSPREG00000015714	gpd2 (ENSPREG00000015690)	NR4A2 (ENSPREG00000015677)	ENSPREG00000015663	ENSPREG00000015607	ENSPREG00000015476	inpp4ab (ENSPREG00000015264)	ALS2 (ENSPREG00000015098) #22	MPP4 (ENSPREG00000015049) #23	tmem237b (ENSPREG00000015009) #24	cyp20a1 (ENSPREG00000014976)	abi2b (ENSPREG00000014947)	dmd (ENSPREG00000014502)	ENSPREG00000014332	tmem47 (ENSPREG00000014234)	ENSPREG00000014219	ENSPREG00000014193	ENSPREG00000014171	nop58 (ENSPREG00000014125)	wdr12 (ENSPREG00000014100)	ical1 (ENSPREG00000014074)	FAM117B (ENSPREG00000014055)	bmpr2a (ENSPREG00000014034)
Platyfish	MODERN SPECIES	16	zswim2 (ENSXMAG00000024598)	ENSXMAG00000007989	ENSXMAG00000007999	ENSXMAG00000008123	pwp2h (ENSXMAG00000008124)	eed (ENSXMAG00000008149)	ATP7B (ENSXMAG00000008157)	LRRC3 (ENSXMAG00000019730)	ENSXMAG00000008175	ENSXMAG00000029591	gpd2 (ENSXMAG00000008190)	NR4A2 (ENSXMAG00000008198)	TUBA4A (ENSXMAG00000026340)	ENSXMAG00000008207	inpp4ab (ENSXMAG00000008270)	ALS2 (ENSXMAG00000008272) #22	MPP4 (ENSXMAG00000008285) #23	tmem237b (ENSXMAG00000008299) #24	cyp20a1 (ENSXMAG00000008300)	abi2b (ENSXMAG00000008309)	DMD (ENSXMAG00000008318)	tmem47 (ENSXMAG00000008404)	ENSXMAG00000008406	ENSXMAG00000024325	ENSXMAG00000030066	nop58 (ENSXMAG00000013666)	wdr12 (ENSXMAG00000013685)	ical1 (ENSXMAG00000013705)	FAM117B (ENSXMAG00000013720)	bmpr2a (ENSXMAG00000013725)	ENSXMAG00000013736
Mangrove rivulus	MODERN SPECIES	398													ENSKMAG00000019722	ENSKMAG00000019887	inpp4ab (ENSKMAG00000019944)	ALS2 (ENSKMAG00000020094) #22	MPP4 (ENSKMAG00000020154) #23	tmem237b (ENSKMAG00000020189) #24	cyp20a1 (ENSKMAG00000020218)	abi2b (ENSKMAG00000020297)	ENSKMAG00000020313	ENSKMAG00000020325	ENSKMAG00000020346	ENSKMAG00000020357
Oryzias	ANCESTRAL SPECIES	40	ENSGT00940000165235.a.a	ENSGT00940000155675.p.b	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a.e	ENSGT00390000000447	ENSGT00940000159255	ENSGT00690000103830	ENSGT00940000159602	ENSGT00940000159870	ENSGT00940000164013	ENSGT00940000156180.e	ENSGT00390000015709	ENSGT00940000155992.c.b	ENSGT00390000009029
Oryzias_b	ANCESTRAL SPECIES	50	ENSGT00940000165235.a.a	ENSGT00940000155675.p.b	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a.e.b.b	ENSGT00390000000447	ENSGT00940000159255	ENSGT00940000159602	ENSGT00940000159870	ENSGT00940000164013	ENSGT00940000156180.e	ENSGT00390000015709	ENSGT00940000155992.c.b	ENSGT00390000009029	ENSGT00730000111141
Indian medaka	DUPLICATION
Indian medaka	MODERN SPECIES	15	atp6v1e1a (ENSOMEG00000021849)	ENSOMEG00000021766	ENSOMEG00000021707	ADA2 (ENSOMEG00000021678)	ribc2 (ENSOMEG00000021658)	GALNT8 (ENSOMEG00000021641)	ndufa9a (ENSOMEG00000021617)	DYRK4 (ENSOMEG00000021604)	wfdc1 (ENSOMEG00000021562)	ENSOMEG00000021551	kcng4a (ENSOMEG00000021540)	HSBP1 (ENSOMEG00000021517)	ENSOMEG00000021506	ENSOMEG00000021492	ENSOMEG00000021483 #22	ALS2 (ENSOMEG00000021475) #22	ENSOMEG00000021443 #23	tmem237b (ENSOMEG00000021418) #24	cyp20a1 (ENSOMEG00000021385)	abi2b (ENSOMEG00000021282)	ENSOMEG00000021084	hsbp1a (ENSOMEG00000021058)	hsbp1a (ENSOMEG00000021046)	ENSOMEG00000021015	mlycd (ENSOMEG00000020903)	CDH13 (ENSOMEG00000020855)	ccnd2a (ENSOMEG00000020836)	tigara (ENSOMEG00000020814)	ENSOMEG00000020796	FGF6 (ENSOMEG00000020767)	zgc:77158 (ENSOMEG00000020727)
Indian medaka	MODERN SPECIES	15	bcl2l13 (ENSOMEG00000021882)	atp6v1e1a (ENSOMEG00000021849)	ENSOMEG00000021766	ENSOMEG00000021707	ADA2 (ENSOMEG00000021678)	ribc2 (ENSOMEG00000021658)	GALNT8 (ENSOMEG00000021641)	ndufa9a (ENSOMEG00000021617)	DYRK4 (ENSOMEG00000021604)	wfdc1 (ENSOMEG00000021562)	ENSOMEG00000021551	kcng4a (ENSOMEG00000021540)	HSBP1 (ENSOMEG00000021517)	ENSOMEG00000021506	ENSOMEG00000021492	ENSOMEG00000021483 #22	ALS2 (ENSOMEG00000021475) #22	ENSOMEG00000021443 #23	tmem237b (ENSOMEG00000021418) #24	cyp20a1 (ENSOMEG00000021385)	abi2b (ENSOMEG00000021282)	ENSOMEG00000021084	hsbp1a (ENSOMEG00000021058)	hsbp1a (ENSOMEG00000021046)	ENSOMEG00000021015	mlycd (ENSOMEG00000020903)	CDH13 (ENSOMEG00000020855)	ccnd2a (ENSOMEG00000020836)	tigara (ENSOMEG00000020814)	ENSOMEG00000020796	FGF6 (ENSOMEG00000020767)
Javanese ricefish	MODERN SPECIES	11	ATP7B (ENSOJAG00000022389)	LRRC3 (ENSOJAG00000022345)	ENSOJAG00000022299	ENSOJAG00000022286	gpd2 (ENSOJAG00000021848)	TUBA4A (ENSOJAG00000021745)	ENSOJAG00000021533	ENSOJAG00000021491	inpp4ab (ENSOJAG00000020924)	zgc:113142 (ENSOJAG00000020888)	ENSOJAG00000020865	ENSOJAG00000020858	ENSOJAG00000020853	ENSOJAG00000020823	ENSOJAG00000020803	ALS2 (ENSOJAG00000020343) #22	MPP4 (ENSOJAG00000020155) #23	tmem237b (ENSOJAG00000020131) #24	abi2b (ENSOJAG00000019884)	ENSOJAG00000019860	ENSOJAG00000019854	ENSOJAG00000019846	ENSOJAG00000019839	ENSOJAG00000019777	ENSOJAG00000019753	ENSOJAG00000019726	DONSON (ENSOJAG00000019708)	runx1 (ENSOJAG00000019546)	ENSOJAG00000019517	ENSOJAG00000019501	RCAN1 (ENSOJAG00000019486)
Oryzias_a	ANCESTRAL SPECIES	56	ENSGT00950000183184.a.a.b	ENSGT00940000165235.a.a	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00390000000447	ENSGT00940000159255	ENSGT00690000103830	ENSGT00940000159602	ENSGT00940000159870	ENSGT00940000164013	ENSGT00940000156180.e	ENSGT00390000015709	ENSGT00940000155992.c.b	ENSGT00390000009029	ENSGT00730000111141
Japanese Medaka HdrR	MODERN SPECIES	11	ENSORLG00000000063	LRRC3 (ENSORLG00000000061)	ENSORLG00000000059	ENSORLG00000027750	gpd2 (ENSORLG00000000052)	ENSORLG00000000050	ENSORLG00000000046	ENSORLG00000000040	ENSORLG00000027764	ENSORLG00000000211	ENSORLG00000026826	ENSORLG00000022471	ENSORLG00000022036	inpp4ab (ENSORLG00000000030)	zgc:113142 (ENSORLG00000000026)	ALS2 (ENSORLG00000000024) #22	MPP4 (ENSORLG00000000012) #23	tmem237b (ENSORLG00000000008) #24	cyp20a1 (ENSORLG00000000005)	abi2b (ENSORLG00000000002)	ENSORLG00000029624	ENSORLG00000027640	ENSORLG00000030290	ENSORLG00000025162	ENSORLG00000025710	ENSORLG00000022467	ENSORLG00000020700	runx1 (ENSORLG00000029555)	ENSORLG00000028942	ENSORLG00000020697	ENSORLG00000028169
Chinese medaka	MODERN SPECIES	931														inpp4ab (ENSOSIG00000005385)	zgc:113142 (ENSOSIG00000005352)	ALS2 (ENSOSIG00000005323) #22	MPP4 (ENSOSIG00000004664) #23	tmem237b (ENSOSIG00000004637) #24	ENSOSIG00000004634	ENSOSIG00000004633
Ovalentaria_B	ANCESTRAL SPECIES	22	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542
Pomacentridae	ANCESTRAL SPECIES	181							ENSGT01090000260059.a.b.b.b.a.d.a.a.b.a.a	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a
Pomacentridae_A	ANCESTRAL SPECIES	139	ENSGT00940000178558	ENSGT00950000183208.A.c.a	ENSGT00940000157233.c	ENSGT00390000016542	ENSGT00530000064137.a.b	ENSGT00940000158539.b	ENSGT00940000155773.a	ENSGT00390000014376.c.b	ENSGT00950000183028.a.a.a.g.b	ENSGT00940000161625.m	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00940000156807.f	ENSGT00940000154657.A.d	ENSGT00950000183165.a.a.a	ENSGT00950000183038.a.b.b.b.r	ENSGT00390000001718.b	ENSGT01090000260059.a.b.b.b.a.d.a.a.b.a.a
Amphiprion	ANCESTRAL SPECIES	166	ENSGT00950000183208.A.c.a	ENSGT00940000157233.c	ENSGT00390000016542	ENSGT00530000064137.a.b	ENSGT01090000262788	ENSGT00940000158539.b	ENSGT00940000155773.a	ENSGT00390000014376.c.b	ENSGT00950000183028.a.a.a.g.b	ENSGT00940000161625.m	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00940000156807.f	ENSGT00940000154657.A.d	ENSGT00950000183165.a.a.a	ENSGT00950000183038.a.b.b.b.r	ENSGT00390000001718.b	ENSGT01090000260059.a.b.b.b.a.d.a.a.b.a.a.c
Clown anemonefish	MODERN SPECIES	2021													ENSAOCG00000010363	zgc:113142 (ENSAOCG00000010331)	CHRNA2 (ENSAOCG00000010308)	ALS2 (ENSAOCG00000002010) #22	MPP4 (ENSAOCG00000010107) #23	tmem237b (ENSAOCG00000009803) #24	cyp20a1 (ENSAOCG00000009746)	abi2b (ENSAOCG00000009325)	ENSAOCG00000009276
Orange clownfish	MODERN SPECIES	16	ACVR2A (ENSAPEG00000020976)	orc4 (ENSAPEG00000020943)	MBD5 (ENSAPEG00000020872)	ENSAPEG00000020851	KIF5C (ENSAPEG00000020317)	ENSAPEG00000020204	si:dkey-276j7.1 (ENSAPEG00000020173)	ENSAPEG00000019836	ENSAPEG00000019789	ENSAPEG00000019745	ENSAPEG00000019608	ENSAPEG00000019552	inpp4ab (ENSAPEG00000019412)	zgc:113142 (ENSAPEG00000019392)	CHRNA2 (ENSAPEG00000019366)	ALS2 (ENSAPEG00000019244) #22	MPP4 (ENSAPEG00000019214) #23	tmem237b (ENSAPEG00000019186) #24	cyp20a1 (ENSAPEG00000019128)	abi2b (ENSAPEG00000019077)	ENSAPEG00000018929	ENSAPEG00000018852	ENSAPEG00000018821	NR4A2 (ENSAPEG00000018813)	gpd2 (ENSAPEG00000018763)	ENSAPEG00000018749	ENSAPEG00000018668	ENSAPEG00000018582	CACNB4 (ENSAPEG00000018520)	SEMA5B (ENSAPEG00000018473)	kpnb3 (ENSAPEG00000018395)
Spiny chromis	MODERN SPECIES	468									ENSAPOG00000004519	ENSAPOG00000004506	ENSAPOG00000004475	inpp4ab (ENSAPOG00000004305)	ENSAPOG00000004164	zgc:113142 (ENSAPOG00000004136)	ENSAPOG00000004130	ALS2 (ENSAPOG00000004100) #22	ENSAPOG00000003957	MPP4 (ENSAPOG00000003932) #23	tmem237b (ENSAPOG00000003914) #24	cyp20a1 (ENSAPOG00000003904)	abi2b (ENSAPOG00000003870)	ENSAPOG00000003825	ENSAPOG00000003654	ENSAPOG00000003626	NR4A2 (ENSAPOG00000003608)	gpd2 (ENSAPOG00000003586)
Bicolor damselfish	MODERN SPECIES	648							ENSSPAG00000005346	gpd2 (ENSSPAG00000005357)	NR4A2 (ENSSPAG00000005393)	TUBA4A (ENSSPAG00000005459)	ENSSPAG00000005518	ENSSPAG00000005827	inpp4ab (ENSSPAG00000005901)	zgc:113142 (ENSSPAG00000005940)	chrna2a (ENSSPAG00000005948)	ALS2 (ENSSPAG00000005992) #22	MPP4 (ENSSPAG00000006093) #23	tmem237b (ENSSPAG00000006600) #24	cyp20a1 (ENSSPAG00000006624)	abi2b (ENSSPAG00000006656)	ENSSPAG00000006685
Cichlidae	ANCESTRAL SPECIES	27														ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542
Pseudocrenilabrinae	ANCESTRAL SPECIES	10	ENSGT00940000158839	ENSGT00500000044870.a	ENSGT00940000154790.a.a.a	ENSGT01100000263585.l	ENSGT00940000154840.b.f.c.a	ENSGT01100000263585.k.b.a	ENSGT00940000154840.b.f.c.b.g	ENSGT01100000263585.k.b.b	ENSGT00940000154840.b.f.c.b.h.a	ENSGT01100000263585.k.a	ENSGT00940000154840.b.f.c.b.h.b	ENSGT00940000156702.a.b.b	ENSGT01040000240451.a.a.d	ENSGT00940000163418.D	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	16	ENSGT00500000044870.a	ENSGT00940000154790.a.a.a	ENSGT01100000263585.l	ENSGT00940000154840.b.f.c.a	ENSGT01100000263585.k.b.a	ENSGT00940000154840.b.f.c.b.g.a	ENSGT00940000154840.b.f.c.b.g.b	ENSGT01100000263585.k.b.b	ENSGT00940000154840.b.f.c.b.h.a	ENSGT01100000263585.k.a	ENSGT00940000154840.b.f.c.b.h.b	ENSGT00940000156702.a.b.b	ENSGT01040000240451.a.a.d	ENSGT00940000163418.D	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542
Haplochromini	ANCESTRAL SPECIES	38	ENSGT01100000263585.k.b.a.b	ENSGT00940000154840.b.f.c.b.g.a	ENSGT01100000263585.k.b.a.a.b	ENSGT00940000154840.b.f.c.b.g.b	ENSGT01100000263585.k.b.b	ENSGT00940000154840.b.f.c.b.h.a	ENSGT01100000263585.k.a	ENSGT00940000154840.b.f.c.b.h.b	ENSGT00940000156702.a.b.b	ENSGT01040000240451.a.a.d	ENSGT00940000163418.D	ENSGT00940000163418.B	ENSGT00940000163418.A.a.b	ENSGT00940000177589	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a.a.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b.q	ENSGT00390000016542	ENSGT00940000157233.c
Burton s mouthbrooder	MODERN SPECIES	941														ENSHBUG00000005757	ENSHBUG00000005752	ALS2 (ENSHBUG00000005708) #22	MPP4 (ENSHBUG00000005464) #23	tmem237b (ENSHBUG00000005410) #24	cyp20a1 (ENSHBUG00000005380)	abi2b (ENSHBUG00000005325)	ENSHBUG00000005315	ENSHBUG00000000130
Haplochromini_A	ANCESTRAL SPECIES	42	ENSGT01100000263585.k.b.a.b	ENSGT00940000154840.b.f.c.b.g.a	ENSGT01100000263585.k.b.a.a.b	ENSGT00940000154840.b.f.c.b.g.b	ENSGT01100000263585.k.b.b	ENSGT00940000154840.b.f.c.b.h.a	ENSGT01100000263585.k.a	ENSGT00940000154840.b.f.c.b.h.b	ENSGT00940000156702.a.b.b	ENSGT01040000240451.a.a.d	ENSGT00940000163418.D	ENSGT00940000163418.B	ENSGT00940000163418.A.a.b	ENSGT00940000177589	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a.a.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000154395.a.a.b.b.g.b.m.a	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b.q	ENSGT00390000016542
P. nyererei	MODERN SPECIES	998																ALS2 (ENSPNYG00000018573) #22
Haplochromini_B	ANCESTRAL SPECIES	48	ENSGT00940000154840.b.f.c.a	ENSGT01100000263585.k.b.a.b	ENSGT00940000154840.b.f.c.b.g.a	ENSGT00940000154840.b.f.c.b.g.b	ENSGT01100000263585.k.b.b	ENSGT00940000154840.b.f.c.b.h.a	ENSGT01100000263585.k.a	ENSGT00940000154840.b.f.c.b.h.b	ENSGT00940000156702.a.b.b	ENSGT01040000240451.a.a.d	ENSGT00940000163418.D	ENSGT00940000163418.B	ENSGT00940000163418.A.a.b	ENSGT00940000177589	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a.a.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000154395.a.a.b.b.g.b.m.a	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b.q	ENSGT00390000016542
Zebra mbuna	MODERN SPECIES	1105	ATP1A1 (ENSMZEG00005017655)	ENSMZEG00005017652	ENSMZEG00005017648	ENSMZEG00005017639	ENSMZEG00005017626	ENSMZEG00005017620	ENSMZEG00005017609	ENSMZEG00005017608	ENSMZEG00005017594	obsl1a (ENSMZEG00005017536)	CTDSP1 (ENSMZEG00005017519)	ENSMZEG00005017512	ENSMZEG00005017509	ENSMZEG00005017505	CHRNA2 (ENSMZEG00005017497)	ALS2 (ENSMZEG00005017474) #22	MPP4 (ENSMZEG00005017460) #23	tmem237b (ENSMZEG00005017445) #24	cyp20a1 (ENSMZEG00005017435)	abi2b (ENSMZEG00005017427)	ENSMZEG00005017418	ENSMZEG00005017403	ENSMZEG00005017391	ENSMZEG00005017382	ENSMZEG00005017377	ENSMZEG00005017375	ENSMZEG00005017371	ENSMZEG00005017369	si:dkey-276j7.1 (ENSMZEG00005017363)	ENSMZEG00005017356	KIF5C (ENSMZEG00005015999)
Eastern happy	MODERN SPECIES	14	ENSACLG00000023697	ENSACLG00000023651	ATP1A1 (ENSACLG00000023619)	ENSACLG00000023606	ENSACLG00000023544	ENSACLG00000023504	ENSACLG00000023491	ENSACLG00000023458	ENSACLG00000023442	ENSACLG00000016283	ENSACLG00000016079	obsl1a (ENSACLG00000016009)	CTDSP1 (ENSACLG00000015973)	spega (ENSACLG00000015860)	CHRNA2 (ENSACLG00000015825)	ALS2 (ENSACLG00000015714) #22	ENSACLG00000015698	MPP4 (ENSACLG00000015624) #23	tmem237b (ENSACLG00000015581) #24	cyp20a1 (ENSACLG00000015505)	abi2b (ENSACLG00000015464)	ENSACLG00000015448	ENSACLG00000015398	ENSACLG00000015120	ENSACLG00000015074	ENSACLG00000015053	ENSACLG00000015039	ENSACLG00000015007	si:dkey-276j7.1 (ENSACLG00000014993)	ENSACLG00000014949	KIF5C (ENSACLG00000014904)
Lyretail cichlid	MODERN SPECIES	315	ENSNBRG00000004895	ATP1A1 (ENSNBRG00000004921)	ENSNBRG00000004998	ENSNBRG00000005065	ENSNBRG00000005085	ENSNBRG00000005153	ATP1A1 (ENSNBRG00000005416)	ENSNBRG00000007930	ATP1A1 (ENSNBRG00000008877)	ENSNBRG00000013779	obsl1a (ENSNBRG00000013788)	CTDSP1 (ENSNBRG00000013840)	ENSNBRG00000013896	ENSNBRG00000013908	CHRNA2 (ENSNBRG00000013966)	ALS2 (ENSNBRG00000014044) #22	MPP4 (ENSNBRG00000014143) #23	tmem237b (ENSNBRG00000014203) #24	cyp20a1 (ENSNBRG00000014215)	ENSNBRG00000014254	abi2b (ENSNBRG00000014263)	ENSNBRG00000014286	ENSNBRG00000014302	ENSNBRG00000014333	ENSNBRG00000014498	ENSNBRG00000014506	ENSNBRG00000014521	ENSNBRG00000014531	ENSNBRG00000014545	ENSNBRG00000014556	ENSNBRG00000014599
Nile tilapia	MODERN SPECIES	14	ENSONIG00000012471	FILIP1L (ENSONIG00000012470)	ENSONIG00000012469	ccdc28a (ENSONIG00000012468)	ENSONIG00000012467	ATP1A1 (ENSONIG00000012456)	ENSONIG00000036775	ENSONIG00000042153	ENSONIG00000032416	ENSONIG00000035563	ENSONIG00000012358	obsl1a (ENSONIG00000027470)	CTDSP1 (ENSONIG00000012356)	spega (ENSONIG00000012351)	CHRNA2 (ENSONIG00000012349)	ALS2 (ENSONIG00000027435) #22	MPP4 (ENSONIG00000032396) #23	tmem237b (ENSONIG00000012346) #24	cyp20a1 (ENSONIG00000012336)	abi2b (ENSONIG00000012331)	GALNT8 (ENSONIG00000010313)	ENSONIG00000034745	ENSONIG00000012316	ENSONIG00000034786	ENSONIG00000012315	ENSONIG00000027291	ENSONIG00000031669	ENSONIG00000028870	ENSONIG00000012312	ENSONIG00000012311	ENSONIG00000014220
Midas cichlid	MODERN SPECIES	425														zgc:113142 (ENSACIG00000000802)	CHRNA2 (ENSACIG00000000879)	ALS2 (ENSACIG00000000938) #22	MPP4 (ENSACIG00000001048) #23	tmem237b (ENSACIG00000001116) #24	cyp20a1 (ENSACIG00000001147)	abi2b (ENSACIG00000001188)
Percomorphaceae_C	ANCESTRAL SPECIES	23	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Percomorphaceae_D	ANCESTRAL SPECIES	23	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Carangaria	ANCESTRAL SPECIES	23	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Carangaria_A	ANCESTRAL SPECIES	38	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Seriola	ANCESTRAL SPECIES	47	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c	ENSGT00950000183208.A.c.a
Greater amberjack	MODERN SPECIES	7	ENSSDUG00000011435	pwp2h (ENSSDUG00000011462)	eed (ENSSDUG00000011532)	ATP7B (ENSSDUG00000011556)	LRRC3 (ENSSDUG00000011592)	ENSSDUG00000011608	ENSSDUG00000011623	gpd2 (ENSSDUG00000011657)	nr4a2b (ENSSDUG00000011809)	TUBA4A (ENSSDUG00000012063)	ENSSDUG00000012079	ENSSDUG00000012129	inpp4ab (ENSSDUG00000012280)	zgc:113142 (ENSSDUG00000012326)	CHRNA2 (ENSSDUG00000012342)	ALS2 (ENSSDUG00000012481) #22	MPP4 (ENSSDUG00000012636) #23	tmem237b (ENSSDUG00000012718) #24	cyp20a1 (ENSSDUG00000012751)	ENSSDUG00000012774	abi2b (ENSSDUG00000012792)	ENSSDUG00000012818	ENSSDUG00000012835	ENSSDUG00000012846	ENSSDUG00000012859	ENSSDUG00000012903	ENSSDUG00000012914	ENSSDUG00000012932	ENSSDUG00000012979	KIF5C (ENSSDUG00000013005)	MBD5 (ENSSDUG00000013099)
Yellowtail amberjack	MODERN SPECIES	3147	sh3bp4a (ENSSLDG00000012152)	ENSSLDG00000012138	ENSSLDG00000012103	AOX1 (ENSSLDG00000011123)	bzw1a (ENSSLDG00000010836)	ENSSLDG00000010788	ENSSLDG00000010753	KYNU (ENSSLDG00000010706)	zeb2b (ENSSLDG00000010668)	ACVR2A (ENSSLDG00000010622)	orc4 (ENSSLDG00000010515)	MBD5 (ENSSLDG00000010440)	inpp4ab (ENSSLDG00000010371)	zgc:113142 (ENSSLDG00000010348)	CHRNA2 (ENSSLDG00000010291)	ALS2 (ENSSLDG00000010212) #22	ENSSLDG00000010157 #23	tmem237b (ENSSLDG00000010122) #24	cyp20a1 (ENSSLDG00000010047)	abi2b (ENSSLDG00000010004)	ENSSLDG00000009979	ENSSLDG00000009703	ENSSLDG00000009626	ENSSLDG00000009607	ENSSLDG00000009473	KIF5C (ENSSLDG00000009394)	ENSSLDG00000009226	ENSSLDG00000009124	ENSSLDG00000009080	nr4a2b (ENSSLDG00000008882)	gpd2 (ENSSLDG00000008768)
Barramundi perch	MODERN SPECIES	115	ENSLCAG00010010465	pwp2h (ENSLCAG00010010467)	eed (ENSLCAG00010010473)	ATP7B (ENSLCAG00010010607)	LRRC3 (ENSLCAG00010011355)	ENSLCAG00010011361	ENSLCAG00010011385	gpd2 (ENSLCAG00010011410)	NR4A2 (ENSLCAG00010011496)	TUBA4A (ENSLCAG00010011538)	ENSLCAG00010011642	ENSLCAG00010011730	inpp4ab (ENSLCAG00010011751)	zgc:113142 (ENSLCAG00010011850)	CHRNA2 (ENSLCAG00010011867)	ALS2 (ENSLCAG00010011964) #22	MPP4 (ENSLCAG00010012045) #23	tmem237b (ENSLCAG00010012060) #24	cyp20a1 (ENSLCAG00010012080)	abi2b (ENSLCAG00010012124)	ENSLCAG00010012155	ENSLCAG00010012176	ENSLCAG00010012182	ENSLCAG00010012187	zgc:112023 (ENSLCAG00010012190)	ENSLCAG00010012199	si:dkey-276j7.1 (ENSLCAG00010012224)	ENSLCAG00010012428	ENSLCAG00010013139	KIF5C (ENSLCAG00010013218)	MBD5 (ENSLCAG00010013634)
Pleuronectoidei	ANCESTRAL SPECIES	47	ENSGT00390000006826	ENSGT00940000165235.a.a	ENSGT00940000168325.d	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c	ENSGT00950000183208.A.c.a
Turbot	MODERN SPECIES		ENSSMAG00000000767	ENSSMAG00000016653	ENSSMAG00000000792	ENSSMAG00000000890	nhej1 (ENSSMAG00000000932)	ENSSMAG00000000951	bin1b (ENSSMAG00000000969)	ENSSMAG00000001062	tmem198b (ENSSMAG00000001083)	desmb (ENSSMAG00000001121)	dnpep (ENSSMAG00000001132)	PTPRN (ENSSMAG00000001165)	ENSSMAG00000001218	ENSSMAG00000001247	ENSSMAG00000001269	ALS2 (ENSSMAG00000001294) #22	ENSSMAG00000001424 #23	tmem237b (ENSSMAG00000001881) #24	cyp20a1 (ENSSMAG00000001937)	abi2b (ENSSMAG00000001987)	ENSSMAG00000033782	ENSSMAG00000002095	ENSSMAG00000002121	ENSSMAG00000024252	ENSSMAG00000002383	KIF5C (ENSSMAG00000002413)	MBD5 (ENSSMAG00000002494)	ORC4 (ENSSMAG00000002536)	ACVR2A (ENSSMAG00000002580)	ZEB2 (ENSSMAG00000002657)	ENSSMAG00000036749
Tongue sole	MODERN SPECIES	5	CNGA3 (ENSCSEG00000006024)	ddx4 (ENSCSEG00000006039)	ENSCSEG00000006167	ankrd10a (ENSCSEG00000006172)	ENSCSEG00000006174	gpd2 (ENSCSEG00000006181)	nr4a2b (ENSCSEG00000006209)	ENSCSEG00000006214	ENSCSEG00000006221	ENSCSEG00000006225	ENSCSEG00000006233	ENSCSEG00000006239	ENSCSEG00000006248	ENSCSEG00000006292	inpp4ab (ENSCSEG00000006311)	ALS2 (ENSCSEG00000006486) #22	MPP4 (ENSCSEG00000006563) #23	tmem237b (ENSCSEG00000006585) #24	cyp20a1 (ENSCSEG00000006600)	abi2b (ENSCSEG00000006631)	ENSCSEG00000006678	ENSCSEG00000006741	ENSCSEG00000006768	FHL2 (ENSCSEG00000006775)	ENSCSEG00000006780	ENSCSEG00000006793	ENSCSEG00000006806	KIF5C (ENSCSEG00000006817)	MBD5 (ENSCSEG00000006850)	orc4 (ENSCSEG00000006874)	ACVR2A (ENSCSEG00000006914)
Anabantaria	ANCESTRAL SPECIES	32	ENSGT00940000155675.p.b	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Anabantoidei	ANCESTRAL SPECIES	28	ENSGT00390000011204	ENSGT00940000164385.a.a.a.b	ENSGT00390000017581.b.b	ENSGT00940000155065.xb.b	ENSGT00390000002215.i.b	ENSGT00530000063607.b.j.b	ENSGT00390000003114.e.b.a	ENSGT00940000158398	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Climbing perch	MODERN SPECIES	11	mrps9 (ENSATEG00000015199)	ENSATEG00000015179	ENSATEG00000015108	ENSATEG00000015062	ENSATEG00000015044	ENSATEG00000015005	ENSATEG00000014967	ENSATEG00000014880	ENSATEG00000014800	ENSATEG00000014678	ENSATEG00000026630	ENSATEG00000014628	ENSATEG00000014519	ENSATEG00000014443	ENSATEG00000014233	ALS2 (ENSATEG00000014072) #22	ENSATEG00000014005 #23	tmem237b (ENSATEG00000013987) #24	cyp20a1 (ENSATEG00000013941)	abi2b (ENSATEG00000013899)	ENSATEG00000026816	ENSATEG00000013793	ENSATEG00000013736	ENSATEG00000013651	ENSATEG00000013592	ENSATEG00000013576	ENSATEG00000013561	ENSATEG00000013509	KIF5C (ENSATEG00000013424)	MBD5 (ENSATEG00000013403)	ORC4 (ENSATEG00000013353)
Siamese fighting fish	MODERN SPECIES	10	ENSBSLG00000001411	mrps9 (ENSBSLG00000001466)	pou3f3b (ENSBSLG00000001618)	actr3 (ENSBSLG00000001636)	LYPD1 (ENSBSLG00000001663)	NCKAP5 (ENSBSLG00000001671)	gpd1c (ENSBSLG00000001710)	OSBPL11 (ENSBSLG00000001729)	gpd2 (ENSBSLG00000001802)	NR4A2 (ENSBSLG00000001870)	ENSBSLG00000001877	ENSBSLG00000002627	inpp4ab (ENSBSLG00000003185)	zgc:113142 (ENSBSLG00000003212)	CHRNA2 (ENSBSLG00000003586)	ALS2 (ENSBSLG00000003776) #22	MPP4 (ENSBSLG00000003898) #23	tmem237b (ENSBSLG00000003916) #24	cyp20a1 (ENSBSLG00000004024)	abi2b (ENSBSLG00000004856)	ENSBSLG00000005163	cybb (ENSBSLG00000005268)	ENSBSLG00000005872	dusp27 (ENSBSLG00000005882)	ENSBSLG00000005894	plaat1l (ENSBSLG00000005915)	ephx2 (ENSBSLG00000005936)	fbxo3 (ENSBSLG00000006427)	ENSBSLG00000006578	ENSBSLG00000006622	ENSBSLG00000006643
Zig-zag eel	MODERN SPECIES	11	ENSMAMG00000022510	ENSMAMG00000022508	ENSMAMG00000022504	bzw1a (ENSMAMG00000022490)	ENSMAMG00000022484	ENSMAMG00000022479	ENSMAMG00000022477	ZEB2 (ENSMAMG00000022475)	ACVR2A (ENSMAMG00000022472)	ORC4 (ENSMAMG00000022465)	MBD5 (ENSMAMG00000022463)	KIF5C (ENSMAMG00000022432)	ENSMAMG00000022416	ENSMAMG00000022423	ENSMAMG00000022411	ALS2 (ENSMAMG00000022402) #22	ENSMAMG00000022400 #23	tmem237b (ENSMAMG00000022398) #24	cyp20a1 (ENSMAMG00000022396)	abi2b (ENSMAMG00000022395)	ENSMAMG00000022394	ENSMAMG00000022391	ENSMAMG00000022393	ENSMAMG00000022390	si:dkey-276j7.1 (ENSMAMG00000022388)	ENSMAMG00000022369	ENSMAMG00000022343	ENSMAMG00000022341	ENSMAMG00000022340	ENSMAMG00000027293	ENSMAMG00000022338
Eupercaria	ANCESTRAL SPECIES	23	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Eupecaria_A	ANCESTRAL SPECIES	23	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Ballan wrasse	MODERN SPECIES	65	ENSLBEG00000004585	zeb2b (ENSLBEG00000004635)	ENSLBEG00000004669	orc4 (ENSLBEG00000004692)	ACVR2A (ENSLBEG00000004722)	MBD5 (ENSLBEG00000004755)	ENSLBEG00000004796	KIF5C (ENSLBEG00000004832)	ENSLBEG00000004915	ENSLBEG00000005006	ENSLBEG00000005023	ENSLBEG00000005042	inpp4ab (ENSLBEG00000005082)	zgc:113142 (ENSLBEG00000005165)	CHRNA2 (ENSLBEG00000005188)	ALS2 (ENSLBEG00000005235) #22	MPP4 (ENSLBEG00000005345) #23	tmem237b (ENSLBEG00000005555) #24	cyp20a1 (ENSLBEG00000005612)	abi2b (ENSLBEG00000005666)	ENSLBEG00000005744	ENSLBEG00000005806	ENSLBEG00000005825	ENSLBEG00000005866	ENSLBEG00000005944	nr4a2b (ENSLBEG00000005973)	gpd2 (ENSLBEG00000006019)	ENSLBEG00000006143	ENSLBEG00000006201	LRRC3 (ENSLBEG00000006245)	ATP7B (ENSLBEG00000006266)
Eupecaria_B	ANCESTRAL SPECIES	23	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Perciformes	ANCESTRAL SPECIES	27	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT01030000235131	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542
Cottioidei	ANCESTRAL SPECIES	48	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT01030000235131	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c	ENSGT00950000183208.A.c.a
Lumpfish	MODERN SPECIES	11	ENSCLMG00005004058	ENSCLMG00005004061	pwp2h (ENSCLMG00005004069)	ATP7B (ENSCLMG00005004095)	LRRC3 (ENSCLMG00005005297)	ENSCLMG00005005299	ENSCLMG00005005395	gpd2 (ENSCLMG00005005415)	NR4A2 (ENSCLMG00005006785)	ENSCLMG00005006787	ENSCLMG00005006789	ENSCLMG00005006807	inpp4ab (ENSCLMG00005006837)	ENSCLMG00005006852	zgc:113142 (ENSCLMG00005006858)	ALS2 (ENSCLMG00005006883) #22	MPP4 (ENSCLMG00005007848) #23	tmem237b (ENSCLMG00005007862) #24	cyp20a1 (ENSCLMG00005007868)	abi2b (ENSCLMG00005007902)	HECW2 (ENSCLMG00005007975)	gtf3c3 (ENSCLMG00005009928)	dmd (ENSCLMG00005009931)	ENSCLMG00005009935	ENSCLMG00005009938	TMEM47 (ENSCLMG00005009941)	ENSCLMG00005009942	ENSCLMG00005009943	ENSCLMG00005009944	nop58 (ENSCLMG00005009946)	wdr12 (ENSCLMG00005009951)
Stickleback	MODERN SPECIES	530	ENSGACG00000014923	pwp2h (ENSGACG00000014928)	eed (ENSGACG00000014939)	ATP7B (ENSGACG00000014945)	LRRC3 (ENSGACG00000014953)	ENSGACG00000014955	ENSGACG00000014958	gpd2 (ENSGACG00000014962)	TUBA4A (ENSGACG00000014965)	ENSGACG00000014974	ENSGACG00000014984	ENSGACG00000014986	inpp4ab (ENSGACG00000014988)	zgc:113142 (ENSGACG00000014992)	CHRNA2 (ENSGACG00000014995)	ALS2 (ENSGACG00000014998) #22	MPP4 (ENSGACG00000015002) #23	tmem237b (ENSGACG00000015016) #24	cyp20a1 (ENSGACG00000015020)	abi2b (ENSGACG00000015031)	ENSGACG00000015033	ENSGACG00000015036	ENSGACG00000015043	ENSGACG00000015048	ENSGACG00000015055	ENSGACG00000015057	KIF5C (ENSGACG00000015060)	MBD5 (ENSGACG00000015071)	orc4 (ENSGACG00000015074)	ACVR2A (ENSGACG00000015083)
Perciformes_a	ANCESTRAL SPECIES	29	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT01030000235131	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Channel bull blenny	MODERN SPECIES	11	ENSCGOG00000014216	pwp2h (ENSCGOG00000014224)	eed (ENSCGOG00000014468)	ATP7B (ENSCGOG00000014706)	LRRC3 (ENSCGOG00000016789)	PCBP3 (ENSCGOG00000016792)	ENSCGOG00000016794	gpd2 (ENSCGOG00000016825)	nr4a2b (ENSCGOG00000017337)	ENSCGOG00000017339	ENSCGOG00000017369	ENSCGOG00000018232	inpp4ab (ENSCGOG00000018278)	zgc:113142 (ENSCGOG00000019818)	CHRNA2 (ENSCGOG00000019821)	ALS2 (ENSCGOG00000019865) #22	MPP4 (ENSCGOG00000019924) #23	tmem237b (ENSCGOG00000019929) #24	cyp20a1 (ENSCGOG00000019942)	abi2b (ENSCGOG00000020352)	ENSCGOG00000020468	ENSCGOG00000020469	zgc:112023 (ENSCGOG00000020471)	FHL2 (ENSCGOG00000020473)	ENSCGOG00000020475	ENSCGOG00000020514	KIF5C (ENSCGOG00000021510)	ENSCGOG00000021684	ENSCGOG00000021686	ENSCGOG00000021687	MBD5 (ENSCGOG00000002636)
Pike perch	MODERN SPECIES	195	ENSSLUG00000018236	ENSSLUG00000018231	mstna (ENSSLUG00000018224)	stat1a (ENSSLUG00000018133)	glsa (ENSSLUG00000016606)	nab1a (ENSSLUG00000016524)	mfsd6a (ENSSLUG00000016457)	ENSSLUG00000016450	ahr1b (ENSSLUG00000016412)	ENSSLUG00000016406	s100b (ENSSLUG00000016400)	ENSSLUG00000016341	sh3bp4a (ENSSLUG00000016311)	ENSSLUG00000016302	CHRNA2 (ENSSLUG00000016272)	ALS2 (ENSSLUG00000015794) #22	ENSSLUG00000015721 #23
Eupecaria_C	ANCESTRAL SPECIES	30	ENSGT00950000183140.a.a	ENSGT00550000074981	ENSGT00510000047334	ENSGT00940000155749.d.cb	ENSGT00940000154360.A.b.b	ENSGT00940000162768.B.b	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183038.a.b.b.b.r	ENSGT00950000183165.a.a.a	ENSGT00940000154657.A.d	ENSGT00940000156807.f	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158299.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	62					ENSGT00940000160639.a	ENSGT00390000013151.a.a.a	ENSGT00940000161997.a	ENSGT00940000154486.b.a.a.b.e.b	ENSGT00940000154486.b.b.a.a	ENSGT00940000155311.B	ENSGT00530000063599.B	ENSGT00390000006330.a.a.b	ENSGT00390000010463.a.b.c.a	ENSGT01050000244905.A.a	ENSGT00940000167649	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00610000086518.b.a	ENSGT00940000165423.a.b	ENSGT01100000263513.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT00390000014376.c.b	ENSGT00940000155773.a	ENSGT00940000158539.b	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c
European seabass	MODERN SPECIES	15	ihhb (ENSDLAG00005034714)	bin1b (ENSDLAG00005001629)	si:ch211-114n24.6 (ENSDLAG00005017754)	ENSDLAG00005032815	ENSDLAG00005001881	sh3bp4a (ENSDLAG00005001885)	s100b (ENSDLAG00005029112)	ENSDLAG00005001905	ahr1b (ENSDLAG00005001965)	ENSDLAG00005030160	mfsd6a (ENSDLAG00005002001)	nab1a (ENSDLAG00005002009)	glsa (ENSDLAG00005002046)	ENSDLAG00005031849	stat1a (ENSDLAG00005003574)	ALS2 (ENSDLAG00005003900) #22	ENSDLAG00005004272	MPP4 (ENSDLAG00005004698) #23	tmem237b (ENSDLAG00005004792) #24	cyp20a1 (ENSDLAG00005004839)	ENSDLAG00005005020	ENSDLAG00005005092	ENSDLAG00005005117	ENSDLAG00005005133	ENSDLAG00005005138	ENSDLAG00005005185	KIF5C (ENSDLAG00005028840)	MBD5 (ENSDLAG00005007803)	ORC4 (ENSDLAG00005007813)	ACVR2A (ENSDLAG00005034750)	ZEB2 (ENSDLAG00005008176)
Large yellow croaker	MODERN SPECIES	486	zc3h13 (ENSLCRG00005013271)	rpl31 (ENSLCRG00005013274)	chst10 (ENSLCRG00005013277)	MAP4K4 (ENSLCRG00005013293)	ENSLCRG00005014340	sh3bp4a (ENSLCRG00005014341)	s100b (ENSLCRG00005014342)	ENSLCRG00005014345	ahr1b (ENSLCRG00005014375)	ENSLCRG00005014383	mfsd6a (ENSLCRG00005014384)	nab1a (ENSLCRG00005014385)	glsa (ENSLCRG00005014400)	stat1a (ENSLCRG00005016792)	mstna (ENSLCRG00005016812)	ALS2 (ENSLCRG00005016821) #22	MPP4 (ENSLCRG00005016829) #23	tmem237b (ENSLCRG00005016841) #24	cyp20a1 (ENSLCRG00005016846)	abi2b (ENSLCRG00005016857)	ENSLCRG00005017103	ENSLCRG00005017108	zgc:112023 (ENSLCRG00005017112)	ENSLCRG00005017113	si:dkey-276j7.1 (ENSLCRG00005017114)	ENSLCRG00005017145	KIF5C (ENSLCRG00005019928)	MBD5 (ENSLCRG00005020022)	orc4 (ENSLCRG00005020026)	ACVR2A (ENSLCRG00005020035)	zeb2b (ENSLCRG00005020091)
Gilthead seabream	MODERN SPECIES	16	ATP7B (ENSSAUG00010025265)	LRRC3 (ENSSAUG00010025253)	ENSSAUG00010025252	ENSSAUG00010025183	ENSSAUG00010025177	gpd2 (ENSSAUG00010025057)	nr4a2b (ENSSAUG00010025050)	TUBA4A (ENSSAUG00010025048)	ENSSAUG00010025046	ENSSAUG00010025045	ENSSAUG00010024176	ENSSAUG00010024145	INPP4A (ENSSAUG00010023931)	zgc:113142 (ENSSAUG00010023917)	CHRNA2 (ENSSAUG00010023915)	ALS2 (ENSSAUG00010023701) #22	MPP4 (ENSSAUG00010023327) #23	tmem237b (ENSSAUG00010023302) #24	cyp20a1 (ENSSAUG00010023306)	abi2b (ENSSAUG00010023257)	ENSSAUG00010023249	chn1 (ENSSAUG00010022436)	FARP1 (ENSSAUG00010022320)	ggact.3 (ENSSAUG00010022301)	arl13b (ENSSAUG00010022298)	NCAM2 (ENSSAUG00010022207)	gart (ENSSAUG00010020550)	n6amt1 (ENSSAUG00010020507)	ENSSAUG00010020505	ENSSAUG00010020502	ENSSAUG00010020500
Tetraodontidae	ANCESTRAL SPECIES	26	ENSGT00390000004923.C	ENSGT00390000001718.b	ENSGT00950000183165.a.a.a	ENSGT00950000183165.b.b.b.b	ENSGT00940000157360.c	ENSGT00940000164908	ENSGT00940000158239.a.b	ENSGT00940000159606 #21	ENSGT00940000164897.a.b	ENSGT00390000007225	ENSGT00390000003114.e.b.a	ENSGT00390000002215.i.b	ENSGT00940000164385.a.a.a.b	ENSGT00390000011204	ENSGT00950000183184.a.a.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00940000165423.a.b	ENSGT00940000161625.m	ENSGT00950000183028.a.a.a.g.b	ENSGT01030000235131	ENSGT00950000183114.a.b.b	ENSGT00390000012561.b.pb.b	ENSGT00940000166136	ENSGT00940000160835	ENSGT00940000167103	ENSGT00390000008033	ENSGT00950000183208.A.c.a
Fugu	MODERN SPECIES	20	zgc:113142 (ENSTRUG00000011355)	fzd7a (ENSTRUG00000027540)	cdk15 (ENSTRUG00000011133) #21	ENSTRUG00000011124	dph3 (ENSTRUG00000011120)	gpd1c (ENSTRUG00000010970)	LYPD1 (ENSTRUG00000010883)	actr3 (ENSTRUG00000010618)	ENSTRUG00000033327	ENSTRUG00000029842	ENSTRUG00000028067	ENSTRUG00000028398	pou3f3b (ENSTRUG00000030854)	ENSTRUG00000026898	ENSTRUG00000010321	ALS2 (ENSTRUG00000009974) #22	MPP4 (ENSTRUG00000009863) #23	tmem237b (ENSTRUG00000009812) #24	cyp20a1 (ENSTRUG00000009561)	abi2b (ENSTRUG00000009423)	ENSTRUG00000029019	ENSTRUG00000008468	ENSTRUG00000019616	AOX1 (ENSTRUG00000006144)	bzw1a (ENSTRUG00000005902)	PLCXD1 (ENSTRUG00000008571)	ENSTRUG00000005875	ENSTRUG00000027028	ENSTRUG00000026999	KYNU (ENSTRUG00000005436)	zeb2b (ENSTRUG00000005095)
Tetraodon	MODERN SPECIES	18	ENSTNIG00000010615	ENSTNIG00000010616	gpd2 (ENSTNIG00000010617)	TUBA4A (ENSTNIG00000010618)	TUBA4A (ENSTNIG00000010619)	inpp4ab (ENSTNIG00000010620)	zgc:113142 (ENSTNIG00000010621)	fzd7a (ENSTNIG00000010622)	cdk15 (ENSTNIG00000010623) #21	ENSTNIG00000000037	gpd1c (ENSTNIG00000010624)	LYPD1 (ENSTNIG00000010625)	pou3f3b (ENSTNIG00000003464)	mrps9 (ENSTNIG00000003463)	ENSTNIG00000017181	ALS2 (ENSTNIG00000017180) #22	ENSTNIG00000000361 #23	cyp20a1 (ENSTNIG00000017178)	ENSTNIG00000017179	cyp20a1 (ENSTNIG00000000941)	abi2b (ENSTNIG00000005932)	ENSTNIG00000017177	ENSTNIG00000017176	fhl2b (ENSTNIG00000017175)	AOX1 (ENSTNIG00000017174)	bzw1a (ENSTNIG00000017173)	ENSTNIG00000000131	ENSTNIG00000017172	ENSTNIG00000000092	ENSTNIG00000017171	ENSTNIG00000017170
Tiger tail seahorse	MODERN SPECIES	404	ENSHCOG00000018153	ENSHCOG00000018137	pwp2h (ENSHCOG00000018121)	eed (ENSHCOG00000018019)	ATP7B (ENSHCOG00000017943)	LRRC3 (ENSHCOG00000017887)	ENSHCOG00000017868	ENSHCOG00000017845	gpd2 (ENSHCOG00000017803)	NR4A2 (ENSHCOG00000017757)	TUBA4A (ENSHCOG00000017595)	ENSHCOG00000017484	SLC9A2 (ENSHCOG00000017234)	inpp4ab (ENSHCOG00000016979)	zgc:113142 (ENSHCOG00000016820)	ALS2 (ENSHCOG00000016773) #22	MPP4 (ENSHCOG00000016686) #23	tmem237b (ENSHCOG00000015966) #24	cyp20a1 (ENSHCOG00000015947)	abi2b (ENSHCOG00000015448)	ENSHCOG00000015424	ENSHCOG00000015273	ENSHCOG00000015259	MBD5 (ENSHCOG00000015223)	orc4 (ENSHCOG00000015200)	ACVR2A (ENSHCOG00000015188)	zeb2b (ENSHCOG00000015167)	ENSHCOG00000000763	MAGI3 (ENSHCOG00000015141)	ENSHCOG00000015106	rca2.1 (ENSHCOG00000015077)
Pinecone sodierfish	MODERN SPECIES	11	iqca1 (ENSMMDG00005022207)	gbx2 (ENSMMDG00005022206)	AGAP1 (ENSMMDG00005021582)	faimb (ENSMMDG00005021558)	RALB (ENSMMDG00005021555)	INHBB (ENSMMDG00005021550)	ENSMMDG00005021541	CLASP1 (ENSMMDG00005021516)	ENSMMDG00005021501	clcn4 (ENSMMDG00005019786)	ENSMMDG00005019740	ENSMMDG00005019738	ENSMMDG00005019733	fzd7a (ENSMMDG00005019732)	cdk15 (ENSMMDG00005019730) #21	ALS2 (ENSMMDG00005019353) #22	MPP4 (ENSMMDG00005019240) #23	tmem237b (ENSMMDG00005019232) #24	etv5b (ENSMMDG00005019229)	CACNB4 (ENSMMDG00005016911)	SEMA5B (ENSMMDG00005016835)	kpnb3 (ENSMMDG00005016767)	CNGA3 (ENSMMDG00005016743)	UBE3A (ENSMMDG00005016321)	ddx4 (ENSMMDG00005014160)	ENSMMDG00005014129	DDRGK1 (ENSMMDG00005014127)	ENSMMDG00005013927	adarb1a (ENSMMDG00005013819)	slx9 (ENSMMDG00005013812)	ENSMMDG00005012527
Cod	MODERN SPECIES	20	ENSGMOG00000004842	ENSGMOG00000024906	ENSGMOG00000036749	CHRM4 (ENSGMOG00000001144)	ENSGMOG00000027928	ENSGMOG00000022687	ENSGMOG00000025812	ENSGMOG00000036573	ENSGMOG00000005902	ENSGMOG00000006961	ENSGMOG00000006957	ENSGMOG00000035449	ENSGMOG00000005700	ENSGMOG00000005046	ENSGMOG00000024095	ALS2 (ENSGMOG00000007250) #22	ENSGMOG00000002312 #23	ENSGMOG00000026893	tmem237b (ENSGMOG00000002511) #24	abi2b (ENSGMOG00000029004)	ENSGMOG00000034307	ENSGMOG00000029267	ENSGMOG00000035489	ENSGMOG00000032597	CLCN4 (ENSGMOG00000009849)	ENSGMOG00000036603	ENSGMOG00000003663	ENSGMOG00000031509	ENSGMOG00000033698	ENSGMOG00000030697	ENSGMOG00000026621
Protacanthopterygii	ANCESTRAL SPECIES	27	ENSGT00940000155655.A	ENSGT00940000157230.b	ENSGT00940000155359.w.b	ENSGT00530000063836.a	ENSGT01050000244842.a.b.b.a.a.a	ENSGT01050000244842.a.b.b.a.a.b	ENSGT01100000263555.a.a.a	ENSGT00940000156082.a.b	ENSGT00940000155522.g.b	ENSGT00390000016940.c.b.b	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000156884	ENSGT00940000154319	ENSGT00940000158239.a.b.e	ENSGT00940000159606 #21	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00950000183115.b.a.m.b	ENSGT00940000155212.ab.a	ENSGT00390000005717.s	ENSGT00940000164897.a.b	ENSGT00940000158265	ENSGT00940000154817.b.b.b.p	ENSGT00940000159213.q.b	ENSGT00940000159862.b	ENSGT00940000155984.i.a.b	ENSGT00940000157211.k	ENSGT00940000156353.u.b
Salmoninae	ANCESTRAL SPECIES	124	ENSGT01050000244842.a.b.b.a.a.b.c.a	ENSGT01100000263555.a.a.a.a	ENSGT00940000156082.a.b.e	ENSGT01100000263555.a.a.a.b.b	ENSGT00940000156082.a.b.f.b	ENSGT00940000155522.g.b.g	ENSGT00390000016940.c.b.b.c	ENSGT00950000182905.a.a.a.a.a.b.a	ENSGT00940000156884.c	ENSGT00940000154319.e.a	ENSGT00950000182905.a.a.a.a.a.b.b	ENSGT00940000156884.d	ENSGT00940000154319.e.b	ENSGT00940000158239.a.b.e	ENSGT00940000159606.d #21	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c.c.b #23	ENSGT00390000005159.j.b #24	ENSGT00500000044939.i	ENSGT00940000156089.e.a.e.b	ENSGT00950000183115.b.a.m.b.d	ENSGT00940000155212.ab.a.l	ENSGT00390000005717.s.g	ENSGT00940000164897.a.b.d	ENSGT00940000156444.c.c.a #23	ENSGT00390000005159.j.a.a.a #24	ENSGT00500000044939.j	ENSGT00940000156089.e.a.e.a	ENSGT00950000183115.b.a.m.b.c	ENSGT00940000155212.ab.a.k	ENSGT00390000005717.s.h
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES	49	ENSGT00500000044939.i	ENSGT00940000156089.e.a.e.b	ENSGT00950000183115.b.a.m.b.d	ENSGT00940000155212.ab.a.l	ENSGT00390000005717.s.g	ENSGT00940000164897.a.b.d	ENSGT01050000244842.a.b.b.a.a.b.c.b	ENSGT01100000263555.a.a.a.b.a	ENSGT00940000156082.a.b.f.a	ENSGT00940000155522.g.b.h	ENSGT00950000182905.a.a.a.a.a.b.b	ENSGT00940000156884.d	ENSGT00940000154319.e.b	ENSGT00940000158239.a.b.e	ENSGT00940000159606.c #21	ENSGT00940000155861.C.e.c #22	ENSGT00940000156444.c.c.a #23	ENSGT00390000005159.j.a.a.a #24	ENSGT00940000156089.e.a.e.a	ENSGT00950000183115.b.a.m.b.c	ENSGT00940000155212.ab.a.k	ENSGT00390000005717.s.h	ENSGT00940000164897.a.b.c	ENSGT00940000158265	ENSGT00940000154817.b.b.b.p.d.a.b	ENSGT00940000159213.q.b	ENSGT00940000159862.b.e	ENSGT00940000155984.i.a.b.b	ENSGT00940000157211.k.c	ENSGT00940000156353.u.b.b	ENSGT00940000178385.b.b
Salmo	ANCESTRAL SPECIES	41	ENSGT00940000155655.A.b	ENSGT00940000157230.b.d	ENSGT00940000155359.w.b.`b	ENSGT00530000063836.a.n	ENSGT01050000244842.a.b.b.a.a.a.k	ENSGT01050000244842.a.b.b.a.a.b.c.b	ENSGT01100000263555.a.a.a.b.a	ENSGT00940000156082.a.b.f.a	ENSGT00940000155522.g.b.g	ENSGT00390000016940.c.b.b.c	ENSGT00950000182905.a.a.a.a.a.b.a	ENSGT00940000156884.c.a	ENSGT00940000154319.e.a	ENSGT00940000158239.a.b.e.e	ENSGT00940000159606.c #21	ENSGT00940000155861.C.e.c #22	ENSGT00940000156444.c.c.a #23	ENSGT00390000005159.j.a.b #24	ENSGT00500000044939.j.a	ENSGT00940000156089.e.a.e.a	ENSGT00950000183115.b.a.m.b.c	ENSGT00940000155212.ab.a.k	ENSGT00390000005717.s.h	ENSGT00940000164897.a.b.c.d	ENSGT00940000158265.v	ENSGT00940000154817.b.b.b.p.d.a.a.a.b	ENSGT00940000155925.k	ENSGT00940000159862.b.e	ENSGT00940000155984.i.a.b.b	ENSGT00940000157211.k.c	ENSGT00940000156353.u.b.b
Atlantic salmon	MODERN SPECIES	8	ENSSSAG00000050347	ENSSSAG00000050476	BAZ2B (ENSSSAG00000048495)	MARCHF7 (ENSSSAG00000048377)	LY75 (ENSSSAG00000047429)	PLA2R1 (ENSSSAG00000047360)	ITGB6 (ENSSSAG00000046328)	RBMS1 (ENSSSAG00000041329)	ENSSSAG00000041137	ENSSSAG00000108130	ENSSSAG00000040860	ENSSSAG00000104661	sumo1 (ENSSSAG00000039756)	FZD7 (ENSSSAG00000090681)	cdk15 (ENSSSAG00000077326) #21	ALS2 (ENSSSAG00000077078) #22	MPP4 (ENSSSAG00000076985) #23	tmem237b (ENSSSAG00000076979) #24	cyp20a1 (ENSSSAG00000076973)	ENSSSAG00000076958	ITM2B (ENSSSAG00000076952)	SHROOM2 (ENSSSAG00000076946)	ENSSSAG00000046061	ENSSSAG00000122046	CLCN4 (ENSSSAG00000076737)	ENSSSAG00000063989	ENSSSAG00000063636	ENSSSAG00000088525	ENSSSAG00000109853	INHBB (ENSSSAG00000063609)	ENSSSAG00000120212
River trout	MODERN SPECIES	32	ENSSTUG00000042294	wdsub1 (ENSSTUG00000042703)	BAZ2B (ENSSTUG00000042862)	MARCHF7 (ENSSTUG00000043848)	LY75 (ENSSTUG00000043896)	PLA2R1 (ENSSTUG00000044514)	ITGB6 (ENSSTUG00000044643)	RBMS1 (ENSSTUG00000045714)	desmb (ENSSTUG00000046040)	tmem198b (ENSSTUG00000046088)	ENSSTUG00000046105	MAP3K2 (ENSSTUG00000046159)	sumo1 (ENSSTUG00000046224)	FZD7 (ENSSTUG00000046239)	cdk15 (ENSSTUG00000046252) #21	ALS2 (ENSSTUG00000046283) #22	ENSSTUG00000046467	MPP4 (ENSSTUG00000046490) #23	tmem237b (ENSSTUG00000046920) #24	cyp20a1 (ENSSTUG00000046939)	abi2b (ENSSTUG00000046952)	itm2ba (ENSSTUG00000047005)	SHROOM2 (ENSSTUG00000047015)	ENSSTUG00000047027	ENSSTUG00000047030	clcn4 (ENSSTUG00000047114)	CLASP1 (ENSSTUG00000048061)	ENSSTUG00000048266	INHBB (ENSSTUG00000048291)	ENSSTUG00000048301	ENSSTUG00000048313
Oncorhynchus	ANCESTRAL SPECIES	43	ENSGT00530000063836.a.n	ENSGT01050000244842.a.b.b.a.a.a.k	ENSGT01050000244842.a.b.b.a.a.b.c.b	ENSGT01100000263555.a.a.a.a.a	ENSGT00940000156082.a.b.f.b	ENSGT00940000156082.a.b.e	ENSGT00940000155522.g.b.g	ENSGT00390000016940.c.b.b.c.c.a	ENSGT00950000182905.a.a.a.a.a.b.b	ENSGT00390000016940.c.b.b.d	ENSGT00950000182905.a.a.a.a.a.b.a.b	ENSGT00940000156884.d	ENSGT00940000154319.e.b	ENSGT00940000158239.a.b.e.d	ENSGT00940000159606.d.b #21	ENSGT00940000155861.C.e.c #22	ENSGT00940000156444.c.c.a #23	ENSGT00390000005159.j.a.a.a #24	ENSGT00500000044939.j	ENSGT00940000156089.e.a.e.a	ENSGT00950000183115.b.a.m.b.c	ENSGT00940000155212.ab.a.k	ENSGT00390000005717.s.h	ENSGT00940000164897.a.b.c	ENSGT00940000158265.x	ENSGT00940000154817.b.b.b.p.d.a.b	ENSGT00940000159213.q.b	ENSGT00940000159862.b.e	ENSGT00940000155984.i.a.b.b	ENSGT00940000157211.k.c	ENSGT00940000156353.u.b.b.b.a
Oncorhynchus_a	ANCESTRAL SPECIES	66	ENSGT00390000000145.g.b.b	ENSGT00970000193621.a.a	ENSGT00940000157728.a.a.g	ENSGT00390000007225.ac	ENSGT00950000183028.a.a.a.g.b.c	ENSGT00390000014376.c.b.c.b	ENSGT00940000155773.a.e	ENSGT00940000155655.A.b	ENSGT00940000157230.b.d	ENSGT00940000155359.w.b.`b	ENSGT00530000063836.a.n	ENSGT01050000244842.a.b.b.a.a.a.k	ENSGT01100000263555.a.a.a.a.a	ENSGT00940000156082.a.b.f.b	ENSGT00940000159606.d.b #21	ENSGT00940000155861.C.e.c #22	ENSGT00940000156444.c.c.a #23	ENSGT00390000005159.j.a.a.a #24	ENSGT00500000044939.j	ENSGT00940000156089.e.a.e.a	ENSGT00950000183115.b.a.m.b.c	ENSGT00940000155212.ab.a.k	ENSGT00390000005717.s.h	ENSGT00940000164897.a.b.c	ENSGT00940000158265.x	ENSGT00940000154817.b.b.b.p.d.a.b	ENSGT00940000159213.q.b	ENSGT00940000159862.b.e	ENSGT00940000155984.i.a.b.b	ENSGT00940000157211.k.c	ENSGT00940000156353.u.b.b.a
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	31	en1b (ENSOTSG00005012050)	C1QL2 (ENSOTSG00005012048)	fam107b (ENSOTSG00005012047)	ENSOTSG00005012045	grm3 (ENSOTSG00005012042)	sema3d (ENSOTSG00005011945)	sema3ab (ENSOTSG00005010487)	ENSOTSG00005010472	desmb (ENSOTSG00005010307)	tmem198b (ENSOTSG00005010303)	ENSOTSG00005010299	MAP3K2 (ENSOTSG00005009181)	sumo1 (ENSOTSG00005009174)	FZD7 (ENSOTSG00005009171)	cdk15 (ENSOTSG00005009163) #21	ALS2 (ENSOTSG00005008889) #22	MPP4 (ENSOTSG00005008057) #23	tmem237b (ENSOTSG00005008046) #24	cyp20a1 (ENSOTSG00005008044)	abi2b (ENSOTSG00005007966)	itm2ba (ENSOTSG00005007965)	SHROOM2 (ENSOTSG00005007963)	ENSOTSG00005007962	ENSOTSG00005007961	clcn4 (ENSOTSG00005004077)	CLASP1 (ENSOTSG00005002456)	gli2b (ENSOTSG00005002348)	INHBB (ENSOTSG00005002325)	ENSOTSG00005002321	ENSOTSG00005002254	MRAS (ENSOTSG00005002236)
Chinook salmon	MODERN SPECIES	31	si:dkey-276j7.1 (ENSOTSG00005012380)	ENSOTSG00005012386	ENSOTSG00005014249	ENSOTSG00005014250	ENSOTSG00005014251	ENSOTSG00005014254	LY75 (ENSOTSG00005014258)	ENSOTSG00005014428	desmb (ENSOTSG00005014435)	tmem198b (ENSOTSG00005014578)	ENSOTSG00005014579	ENSOTSG00005014582	sumo1 (ENSOTSG00005014584)	FZD7 (ENSOTSG00005014591)	cdk15 (ENSOTSG00005014592) #21	ALS2 (ENSOTSG00005014642) #22	MPP4 (ENSOTSG00005015331) #23	tmem237b (ENSOTSG00005015534) #24	abi2b (ENSOTSG00005015541)	itm2ba (ENSOTSG00005015797)	SHROOM2 (ENSOTSG00005015798)	ENSOTSG00005015799	ENSOTSG00005015800	clcn4 (ENSOTSG00005015838)	CLASP1 (ENSOTSG00005023535)	GLI2 (ENSOTSG00005028275)	INHBB (ENSOTSG00005028293)	ENSOTSG00005028295	ENSOTSG00005028303	MRAS (ENSOTSG00005028313)	ENSOTSG00005028314
Coho salmon	MODERN SPECIES	25	ENSOKIG00005031531	ENSOKIG00005033164	wdsub1 (ENSOKIG00005033986)	BAZ2B (ENSOKIG00005034120)	MARCHF7 (ENSOKIG00005035561)	LY75 (ENSOKIG00005035673)	ITGB6 (ENSOKIG00005036724)	RBMS1 (ENSOKIG00005037356)	desmb (ENSOKIG00005037516)	tmem198b (ENSOKIG00005037706)	ENSOKIG00005037735	MAP3K2 (ENSOKIG00005037763)	sumo1 (ENSOKIG00005038335)	FZD7 (ENSOKIG00005038385)	cdk15 (ENSOKIG00005038410) #21	ALS2 (ENSOKIG00005038534) #22	ENSOKIG00005039681	MPP4 (ENSOKIG00005039734) #23	itm2ba (ENSOKIG00005040503)	tmem237b (ENSOKIG00005040561) #24	CYP20A1 (ENSOKIG00005040611)	ENSOKIG00005041000	SHROOM2 (ENSOKIG00005041211)	ENSOKIG00005041241	ENSOKIG00005041256	clcn4 (ENSOKIG00005041364)	CLASP1 (ENSOKIG00005043085)	ENSOKIG00005045961	INHBB (ENSOKIG00005046030)	ENSOKIG00005046047	ENSOKIG00005046076
Rainbow trout	MODERN SPECIES	28	ENSOMYG00000014288	ENSOMYG00000014439	BAZ2B (ENSOMYG00000014839)	MARCHF7 (ENSOMYG00000014938)	LY75 (ENSOMYG00000015093)	PLA2R1 (ENSOMYG00000015452)	ITGB6 (ENSOMYG00000015516)	RBMS1 (ENSOMYG00000074127)	ENSOMYG00000015622	ENSOMYG00000015648	ENSOMYG00000015669	ENSOMYG00000015706	sumo1 (ENSOMYG00000016398)	FZD7 (ENSOMYG00000016464)	cdk15 (ENSOMYG00000016483) #21	ALS2 (ENSOMYG00000017007) #22	ENSOMYG00000017890	MPP4 (ENSOMYG00000017951) #23	tmem237b (ENSOMYG00000018836) #24	cyp20a1 (ENSOMYG00000018865)	abi2b (ENSOMYG00000018986)	SHROOM2 (ENSOMYG00000019092)	ENSOMYG00000019101	ENSOMYG00000019108	clcn4 (ENSOMYG00000019302)	ENSOMYG00000019724	ENSOMYG00000020433	ENSOMYG00000020483	ENSOMYG00000020491	ENSOMYG00000020536	ENSOMYG00000020666
Salmoninae_a	ANCESTRAL SPECIES	49	ENSGT00940000155773.a.f	ENSGT00940000155655.A.a	ENSGT00940000157230.b.c	ENSGT00940000155359.w.b.ab	ENSGT00530000063836.a.m	ENSGT01050000244842.a.b.b.a.a.a.l	ENSGT01050000244842.a.b.b.a.a.b.c.a	ENSGT01100000263555.a.a.a.a	ENSGT00940000156082.a.b.e	ENSGT00940000155522.g.b.g	ENSGT00390000016940.c.b.b.c	ENSGT00950000182905.a.a.a.a.a.b.a	ENSGT00940000156884.c	ENSGT00940000154319.e.a	ENSGT00940000159606.d #21	ENSGT00940000155861.C.e.d #22	ENSGT00940000156444.c.c.b #23	ENSGT00390000005159.j.b #24	ENSGT00500000044939.j	ENSGT00390000005159.j.a.a.b #24	ENSGT00500000044939.i	ENSGT00940000156089.e.a.e.b	ENSGT00950000183115.b.a.m.b.d	ENSGT00940000155212.ab.a.l	ENSGT00390000005717.s.g	ENSGT00940000164897.a.b.d	ENSGT01050000244842.a.b.b.a.a.b.c.b	ENSGT01100000263555.a.a.a.b.a	ENSGT00940000156082.a.b.f.a	ENSGT00940000155522.g.b.h	ENSGT00950000182905.a.a.a.a.a.b.b
Oncorhynchus	ANCESTRAL SPECIES	49	ENSGT00940000155655.A.a	ENSGT00940000157230.b.c	ENSGT00940000155359.w.b.ab	ENSGT00530000063836.a.m	ENSGT01050000244842.a.b.b.a.a.a.l	ENSGT01050000244842.a.b.b.a.a.b.c.a	ENSGT01100000263555.a.a.a.a.b	ENSGT00940000156082.a.b.f.a	ENSGT00940000155522.g.b.h	ENSGT00390000016940.c.b.b.c.c.b	ENSGT00950000182905.a.a.a.a.a.b.a.a	ENSGT00940000156884.c	ENSGT00940000154319.e.a	ENSGT00940000158239.a.b.e.c	ENSGT00940000159606.d.a #21	ENSGT00940000155861.C.e.d #22	ENSGT00940000156444.c.c.b #23	ENSGT00390000005159.j.a.a.b #24	ENSGT00940000156444.c.d #23	ENSGT00390000005159.j.b #24	ENSGT00500000044939.i	ENSGT00940000156089.e.a.e.b	ENSGT00950000183115.b.a.m.b.d	ENSGT00940000155212.ab.a.l	ENSGT00390000005717.s.g	ENSGT00940000164897.a.b.d	ENSGT00940000158265.w	ENSGT00940000154817.b.b.b.p.d.b	ENSGT00940000160235.h	ENSGT00940000159862.b.f	ENSGT00940000155984.i.a.b.a
Oncorhynchus_a	ANCESTRAL SPECIES	6	ENSGT01050000244842.a.b.b.a.a.b.c.a	ENSGT01100000263555.a.a.a.a.b	ENSGT00940000156082.a.b.f.a	ENSGT00940000156082.a.b.e	ENSGT00940000155522.g.b.g	ENSGT00390000016940.c.b.b.c.c.a	ENSGT00390000016940.c.b.b.d	ENSGT01050000245843.B	ENSGT00940000155522.g.b.h	ENSGT00390000016940.c.b.b.c.c.b	ENSGT00950000182905.a.a.a.a.a.b.a.a	ENSGT00940000156884.c	ENSGT00940000154319.e.a	ENSGT00940000158239.a.b.e.c	ENSGT00940000159606.d.a #21	ENSGT00940000155861.C.e.d #22	ENSGT00940000156444.c.c.b #23	ENSGT00940000156444.c.d #23	ENSGT00390000005159.j.b #24	ENSGT00500000044939.i	ENSGT00940000156089.e.a.e.b	ENSGT00950000183115.b.a.m.b.d	ENSGT00940000155212.ab.a.l	ENSGT00390000005717.s.g	ENSGT00940000164897.a.b.d	ENSGT00940000158265.w	ENSGT00940000154817.b.b.b.p.d.b	ENSGT00940000160235.h	ENSGT00940000159862.b.f	ENSGT00940000155984.i.a.b.a	ENSGT00940000157211.k.d
Chinook salmon	MODERN SPECIES	5	ENSOTSG00005021932	ENSOTSG00005024882	wdsub1 (ENSOTSG00005024883)	BAZ2B (ENSOTSG00005024893)	MARCHF7 (ENSOTSG00005026584)	LY75 (ENSOTSG00005026586)	PLA2R1 (ENSOTSG00005026587)	ITGB6 (ENSOTSG00005026590)	RBMS1 (ENSOTSG00005027698)	tmem198b (ENSOTSG00005027705)	ENSOTSG00005027709	ENSOTSG00005027720	SUMO1 (ENSOTSG00005027856)	FZD7 (ENSOTSG00005027861)	ENSOTSG00005027863	ALS2 (ENSOTSG00005027880) #22	MPP4 (ENSOTSG00005027889) #23	cyp20a1 (ENSOTSG00005027892)	abi2b (ENSOTSG00005028163)	itm2ba (ENSOTSG00005028333)	SHROOM2 (ENSOTSG00005028334)	ENSOTSG00005033378	ENSOTSG00005033379	clcn4 (ENSOTSG00005033380)	CLASP1 (ENSOTSG00005033552)	ENSOTSG00005034427	INHBB (ENSOTSG00005034431)	RALB (ENSOTSG00005034434)	ptpn4b (ENSOTSG00005034435)	MRAS (ENSOTSG00005034485)	ENSOTSG00005034486
Coho salmon	MODERN SPECIES	7	wdsub1 (ENSOKIG00005010604)	BAZ2B (ENSOKIG00005005998)	MARCHF7 (ENSOKIG00005005647)	LY75 (ENSOKIG00005005291)	PLA2R1 (ENSOKIG00005005196)	ITGB6 (ENSOKIG00005004992)	RBMS1 (ENSOKIG00005004919)	ENSOKIG00005004896	DES (ENSOKIG00005004884)	TMEM198 (ENSOKIG00005004876)	ENSOKIG00005004835	ENSOKIG00005004425	sumo1 (ENSOKIG00005004303)	FZD7 (ENSOKIG00005004258)	cdk15 (ENSOKIG00005050978) #21	ALS2 (ENSOKIG00005050977) #22	ENSOKIG00005050976	ENSOKIG00005050975 #23	tmem237b (ENSOKIG00005050973) #24	cyp20a1 (ENSOKIG00005050972)	abi2b (ENSOKIG00005050970)	itm2ba (ENSOKIG00005050967)	SHROOM2 (ENSOKIG00005050965)	ENSOKIG00005050964	ENSOKIG00005050963	clcn4 (ENSOKIG00005050952)	CLASP1 (ENSOKIG00005050943)	ENSOKIG00005050941	ENSOKIG00005050940	INHBB (ENSOKIG00005050939)	ENSOKIG00005050938
Rainbow trout	MODERN SPECIES	9	BAZ2B (ENSOMYG00000008254)	ENSOMYG00000020458	MARCHF7 (ENSOMYG00000012255)	LY75 (ENSOMYG00000012337)	PLA2R1 (ENSOMYG00000012671)	ITGB6 (ENSOMYG00000012738)	RBMS1 (ENSOMYG00000012941)	ENSOMYG00000012958	ENSOMYG00000012967	ENSOMYG00000012986	ENSOMYG00000012043	ENSOMYG00000013052	sumo1 (ENSOMYG00000013139)	FZD7 (ENSOMYG00000013168)	cdk15 (ENSOMYG00000013180) #21	ALS2 (ENSOMYG00000013245) #22	MPP4 (ENSOMYG00000013417) #23	tmem237b (ENSOMYG00000013566) #24	cyp20a1 (ENSOMYG00000013637)	abi2b (ENSOMYG00000014053)	itm2ba (ENSOMYG00000014040)	SHROOM2 (ENSOMYG00000014082)	ENSOMYG00000014100	ENSOMYG00000014113	clcn4 (ENSOMYG00000014387)	CLASP1 (ENSOMYG00000018219)	ENSOMYG00000019264	ENSOMYG00000056576	INHBB (ENSOMYG00000072155)	ENSOMYG00000019312	ENSOMYG00000019325
Salmo	ANCESTRAL SPECIES	48	ENSGT00940000155655.A.a	ENSGT00940000157230.b.c	ENSGT00940000155359.w.b.ab	ENSGT00530000063836.a.m	ENSGT01050000244842.a.b.b.a.a.a.l	ENSGT01050000244842.a.b.b.a.a.b.c.a	ENSGT01100000263555.a.a.a.b.b	ENSGT00940000156082.a.b.f.b	ENSGT01050000245843.B	ENSGT00940000155522.g.b.h	ENSGT00950000182905.a.a.a.a.a.b.b	ENSGT00940000156884.d	ENSGT00940000154319.e.b	ENSGT00940000158239.a.b.e.f	ENSGT00940000159606.d #21	ENSGT00940000155861.C.e.d #22	ENSGT00940000156444.c.c.b #23	ENSGT00390000005159.j.b #24	ENSGT00500000044939.j.b	ENSGT00940000156089.e.a.e.b	ENSGT00950000183115.b.a.m.b.d	ENSGT00940000155212.ab.a.l	ENSGT00390000005717.s.g	ENSGT00940000164897.a.b.c.c	ENSGT00940000158265.u	ENSGT00940000154817.b.b.b.p.d.a.a.a.a	ENSGT00940000160235.h	ENSGT00940000159862.b.f	ENSGT00940000155984.i.a.b.a	ENSGT00940000157211.k.d	ENSGT00940000156353.u.b.a
River trout	MODERN SPECIES	36	BAZ2B (ENSSTUG00000006981)	MARCHF7 (ENSSTUG00000006800)	LY75 (ENSSTUG00000006346)	PLA2R1 (ENSSTUG00000006248)	ITGB6 (ENSSTUG00000005572)	RBMS1 (ENSSTUG00000005466)	ENSSTUG00000005451	ENSSTUG00000005445	desmb (ENSSTUG00000005285)	tmem198b (ENSSTUG00000005264)	ENSSTUG00000005029	ENSSTUG00000004927	sumo1 (ENSSTUG00000004889)	FZD7 (ENSSTUG00000004884)	cdk15 (ENSSTUG00000004847) #21	ALS2 (ENSSTUG00000004634) #22	MPP4 (ENSSTUG00000004575) #23	tmem237b (ENSSTUG00000004528) #24	cyp20a1 (ENSSTUG00000004438)	abi2b (ENSSTUG00000004354)	itm2ba (ENSSTUG00000004330)	ENSSTUG00000004321	ENSSTUG00000004306	ENSSTUG00000004295	ENSSTUG00000004284	clcn4 (ENSSTUG00000003597)	CLASP1 (ENSSTUG00000001621)	ENSSTUG00000001189	INHBB (ENSSTUG00000001135)	ENSSTUG00000001128	MRAS (ENSSTUG00000001119)
Atlantic salmon	MODERN SPECIES	7	ENSSSAG00000065378	BAZ2B (ENSSSAG00000053120)	MARCHF7 (ENSSSAG00000052840)	LY75 (ENSSSAG00000052417)	PLA2R1 (ENSSSAG00000052320)	ITGB6 (ENSSSAG00000048382)	RBMS1 (ENSSSAG00000047854)	ENSSSAG00000091174	ENSSSAG00000047730	ENSSSAG00000047678	ENSSSAG00000099696	sumo1 (ENSSSAG00000047369)	FZD7 (ENSSSAG00000088178)	ENSSSAG00000089522	cdk15 (ENSSSAG00000047111) #21	ALS2 (ENSSSAG00000046554) #22	MPP4 (ENSSSAG00000046379) #23	tmem237b (ENSSSAG00000046359) #24	cyp20a1 (ENSSSAG00000046176)	ENSSSAG00000046090	itm2ba (ENSSSAG00000046077)	ENSSSAG00000046072	ENSSSAG00000112669	ENSSSAG00000041231	ENSSSAG00000006583	ENSSSAG00000006063	INHBB (ENSSSAG00000095753)	ralbb (ENSSSAG00000078039)	ENSSSAG00000078051	ENSSSAG00000063307	ENSSSAG00000078022
Huchen	DUPLICATION
Huchen	MODERN SPECIES	13	ENSHHUG00000026576	MARCHF7 (ENSHHUG00000026635)	LY75 (ENSHHUG00000026647)	ENSHHUG00000026669	ENSHHUG00000026686	ENSHHUG00000026695	ITGB6 (ENSHHUG00000026717)	RBMS1 (ENSHHUG00000026744)	desmb (ENSHHUG00000027036)	tmem198b (ENSHHUG00000027235)	ENSHHUG00000027239	MAP3K2 (ENSHHUG00000027257)	SUMO1 (ENSHHUG00000027271)	FZD7 (ENSHHUG00000027283)	cdk15 (ENSHHUG00000027292) #21	ALS2 (ENSHHUG00000027311) #22	MPP4 (ENSHHUG00000027332) #23	tmem237b (ENSHHUG00000027343) #24	cyp20a1 (ENSHHUG00000027367)	abi2b (ENSHHUG00000027445)	itm2ba (ENSHHUG00000027526)	SHROOM2 (ENSHHUG00000027533)	ENSHHUG00000027542	ENSHHUG00000027544	clcn4 (ENSHHUG00000027548)	ENSHHUG00000027867	GLI2 (ENSHHUG00000028740)	INHBB (ENSHHUG00000028744)	ENSHHUG00000028750	ptpn4b (ENSHHUG00000028757)	MRAS (ENSHHUG00000028809)
Huchen	MODERN SPECIES	6436																ALS2 (ENSHHUG00000025895) #22	ENSHHUG00000025911 #23
Northern pike	MODERN SPECIES	21	ENSELUG00000019577	ENSELUG00000026157	marchf7 (ENSELUG00000019222)	LY75 (ENSELUG00000019195)	PLA2R1 (ENSELUG00000019037)	ITGB6 (ENSELUG00000018949)	RBMS1 (ENSELUG00000018923)	desmb (ENSELUG00000018874)	tmem198b (ENSELUG00000018835)	ENSELUG00000018822	ENSELUG00000028571	MAP3K2 (ENSELUG00000018797)	sumo1 (ENSELUG00000018738)	FZD7 (ENSELUG00000018707)	cdk15 (ENSELUG00000018693) #21	ALS2 (ENSELUG00000018653) #22	MPP4 (ENSELUG00000018414) #23	tmem237b (ENSELUG00000018312) #24	cyp20a1 (ENSELUG00000018269)	abi2b (ENSELUG00000018242)	itm2ba (ENSELUG00000017924)	SHROOM2 (ENSELUG00000017883)	ENSELUG00000017798	ENSELUG00000017731	clcn4 (ENSELUG00000017771)	CLASP1 (ENSELUG00000000708)	gli2b (ENSELUG00000017638)	INHBB (ENSELUG00000031359)	RALB (ENSELUG00000017597)	PTPN4 (ENSELUG00000017576)	MRAS (ENSELUG00000017558)
Otomorpha	ANCESTRAL SPECIES	260	ENSGT00950000183165.b.a.e.a	ENSGT00940000154095.b.b.a.a	ENSGT00390000003164	ENSGT00940000155522.g.b	ENSGT00390000016940.c.b.b	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000156884	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00930000150950.b	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.a.a.d	ENSGT00940000159606 #21	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00940000163253.b.c.a
Clupeiformes	ANCESTRAL SPECIES	46	ENSGT00530000063779.A.e.b	ENSGT00950000183072.b.b.b	ENSGT01030000235214	ENSGT00940000163423.C.g.b	ENSGT00530000063608.B.b	ENSGT00940000157526.b	ENSGT00940000155518.n	ENSGT00940000154076.B.b	ENSGT00940000155099.k.b	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00860000133854	ENSGT00940000158239.a.b	ENSGT00940000158239.a.a.d	ENSGT00940000159606 #21	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00940000163253.b.c.a.e	ENSGT00500000044939	ENSGT00940000156180.e	ENSGT00390000001225	ENSGT00390000005581.a	ENSGT00940000167649	ENSGT00940000158526	ENSGT00530000064137.a.b	ENSGT00390000016542	ENSGT00940000157233.c	ENSGT00950000183208.A.c.a	ENSGT00390000008033	ENSGT00940000157521.a.b
Atlantic herring	MODERN SPECIES	13	ABCB11 (ENSCHAG00000001238)	ENSCHAG00000001566	ENSCHAG00000001617	ENSCHAG00000001653	scn1lab (ENSCHAG00000001804)	ENSCHAG00000005759	ENSCHAG00000005781	ENSCHAG00000005850	ENSCHAG00000005919	ENSCHAG00000006018	SP3 (ENSCHAG00000007545)	nop58 (ENSCHAG00000007579)	sumo1 (ENSCHAG00000007753)	fzd7b (ENSCHAG00000007812)	cdk15 (ENSCHAG00000007829) #21	ALS2 (ENSCHAG00000007884) #22	MPP4 (ENSCHAG00000008043) #23	tmem237b (ENSCHAG00000009153) #24	zp2l2 (ENSCHAG00000009198)	cyp20a1 (ENSCHAG00000009217)	ENSCHAG00000009301	cnot9 (ENSCHAG00000011642)	ftcd (ENSCHAG00000011671)	ENSCHAG00000011727	mstna (ENSCHAG00000011741)	ENSCHAG00000011749	ENSCHAG00000011763	ENSCHAG00000011781	orc4 (ENSCHAG00000011816)	ACVR2A (ENSCHAG00000012241)	zeb2b (ENSCHAG00000012603)
Denticle herring	MODERN SPECIES	15	ENSDCDG00000013270	ENSDCDG00000013268	CSRNP3 (ENSDCDG00000013262)	ENSDCDG00000013261	scn1lab (ENSDCDG00000009733)	ENSDCDG00000009484	ENSDCDG00000009470	KCNH7 (ENSDCDG00000009421)	ENSDCDG00000002765	ENSDCDG00000002554	nop58 (ENSDCDG00000002539)	ENSDCDG00000002523	sumo1 (ENSDCDG00000002518)	fzd7b (ENSDCDG00000002516)	cdk15 (ENSDCDG00000002501) #21	ALS2 (ENSDCDG00000002468) #22	MPP4 (ENSDCDG00000002418) #23	zp2l2 (ENSDCDG00000002409)	tmem237b (ENSDCDG00000002406) #24	cyp20a1 (ENSDCDG00000002398)	ENSDCDG00000001319	cnot9 (ENSDCDG00000001090)	ftcd (ENSDCDG00000001081)	mstna (ENSDCDG00000001073)	MBD5 (ENSDCDG00000001067)	orc4 (ENSDCDG00000001038)	ACVR2A (ENSDCDG00000000525)	zeb2b (ENSDCDG00000000270)	ENSDCDG00000000205	KYNU (ENSDCDG00000026942)	LRP1B (ENSDCDG00000026680)
Otophysi	ANCESTRAL SPECIES	44	ENSGT00940000160000	ENSGT00390000002188	ENSGT00390000017916	ENSGT00390000012731.a.b.i	ENSGT00940000155248.vb	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000156884	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00930000150950.b	ENSGT00940000161395	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.a.a.d	ENSGT00940000159606 #21	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00940000163253.b.c.a	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00950000183115.b.a.m.b	ENSGT00390000003338	ENSGT00390000010170.a.b	ENSGT01050000244937.a.a.q	ENSGT00940000155749.d	ENSGT00940000156219.e.b	ENSGT00940000167474	ENSGT00530000063779.A.e.b	ENSGT01030000235214	ENSGT00940000163423.C.g.b
Characiphysae	ANCESTRAL SPECIES	18	ENSGT00390000002188	ENSGT00390000017916	ENSGT00390000012731.a.b.i	ENSGT00940000155248.vb.b.b	ENSGT00940000155248.vb.b.a	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000156884	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00930000150950.b	ENSGT00940000161395	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.a.a.d	ENSGT00940000159606 #21	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00940000163253.b.c.a	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00950000183115.b.a.m.b	ENSGT00390000003338	ENSGT00390000010170.a.b	ENSGT01050000244937.a.a.q	ENSGT00940000155749.d	ENSGT00940000156219.e.b	ENSGT00940000167474	ENSGT00530000063779.A.e.b	ENSGT00940000163423.C.g.b	ENSGT01030000235214
Channel catfish	MODERN SPECIES	3	iqcb1 (ENSIPUG00000021257)	ccdc14 (ENSIPUG00000021247)	ENSIPUG00000021241	ENSIPUG00000021144	kalrnb (ENSIPUG00000021106)	ENSIPUG00000021092	map3k2 (ENSIPUG00000021031)	cyp27c1 (ENSIPUG00000021019)	ercc3 (ENSIPUG00000021000)	wdr12 (ENSIPUG00000020990)	TCF23 (ENSIPUG00000020982)	nop58 (ENSIPUG00000020953)	sumo1 (ENSIPUG00000020934)	fzd7b (ENSIPUG00000020929)	cdk15 (ENSIPUG00000020913) #21	als2 (ENSIPUG00000020848) #22	MPP4 (ENSIPUG00000020832) #23	tmem237 (ENSIPUG00000020819) #24	zp2l2 (ENSIPUG00000019699)	CYP20A1 (ENSIPUG00000019612)	abi2b (ENSIPUG00000019578)	itm2b (ENSIPUG00000019560)	nudt15 (ENSIPUG00000019557)	sucla2 (ENSIPUG00000019521)	htr2a (ENSIPUG00000019516)	ATP7B (ENSIPUG00000019501)	B3GALT1 (ENSIPUG00000019492)	XIRP2 (ENSIPUG00000019474)	scn1lab (ENSIPUG00000019428)	ENSIPUG00000019405	ENSIPUG00000019384
Characiphysae_b	ANCESTRAL SPECIES	46	ENSGT00390000002188	ENSGT00390000017916	ENSGT00390000012731.a.b.i	ENSGT00940000155248.vb.b.b	ENSGT00940000155248.vb.b.a	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000156884	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00930000150950.b	ENSGT00940000161395	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.a.a.d	ENSGT00940000159606 #21	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00940000163253.b.c.a	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00950000183115.b.a.m.b	ENSGT00390000003338	ENSGT00390000010170.a.b	ENSGT01050000244937.a.a.q	ENSGT00940000155749.d	ENSGT00940000156219.e.b	ENSGT00940000167474	ENSGT00530000063779.A.e.b	ENSGT00940000163423.C.g.b	ENSGT01030000235214
Characoidei	ANCESTRAL SPECIES	23	ENSGT00390000002188	ENSGT00390000017916	ENSGT00390000012731.a.b.i	ENSGT00940000155248.vb.b.b	ENSGT00940000155248.vb.b.a	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000156884	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00930000150950.b	ENSGT00940000161395	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.a.a.d	ENSGT00940000159606 #21	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00940000163253.b.c.a	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00950000183115.b.a.m.b	ENSGT00390000003338	ENSGT00390000010170.a.b	ENSGT01050000244937.a.a.q	ENSGT00940000155749.d	ENSGT00940000156219.e.b	ENSGT00530000063779.A.e.b	ENSGT00940000163423.C.g.b	ENSGT01030000235214	ENSGT00530000063608.B.b
Red-bellied piranha	MODERN SPECIES	81	ENSPNAG00000006472	iqcb1 (ENSPNAG00000022923)	ENSPNAG00000022905	ENSPNAG00000022891	KALRN (ENSPNAG00000022882)	ENSPNAG00000022735	MAP3K2 (ENSPNAG00000022689)	cyp27c1 (ENSPNAG00000022597)	ercc3 (ENSPNAG00000005748)	wdr12 (ENSPNAG00000022459)	ENSPNAG00000022382	nop58 (ENSPNAG00000022346)	sumo1 (ENSPNAG00000022274)	fzd7b (ENSPNAG00000022238)	cdk15 (ENSPNAG00000022210) #21	ALS2 (ENSPNAG00000005633) #22	MPP4 (ENSPNAG00000021867) #23	tmem237b (ENSPNAG00000021847) #24	zp2l2 (ENSPNAG00000021706)	cyp20a1 (ENSPNAG00000003568)	abi2b (ENSPNAG00000018990)	itm2ba (ENSPNAG00000018912)	nudt15 (ENSPNAG00000003555)	sucla2 (ENSPNAG00000018855)	HTR2A (ENSPNAG00000018815)	ATP7B (ENSPNAG00000018792)	B3GALT1 (ENSPNAG00000018755)	XIRP2 (ENSPNAG00000018737)	scn1lab (ENSPNAG00000018706)	ENSPNAG00000018495	ENSPNAG00000018484
Mexicana tetra	MODERN SPECIES	1	iqcb1 (ENSAMXG00000005039)	ENSAMXG00000005037	ENSAMXG00000042659	ENSAMXG00000031874	kalrnb (ENSAMXG00000040786)	ENSAMXG00000038610	MAP3K2 (ENSAMXG00000005030)	cyp27c1 (ENSAMXG00000005029)	ercc3 (ENSAMXG00000036947)	wdr12 (ENSAMXG00000005026)	ENSAMXG00000032532	nop58 (ENSAMXG00000005022)	ENSAMXG00000005020	fzd7b (ENSAMXG00000025971)	cdk15 (ENSAMXG00000005019) #21	ALS2 (ENSAMXG00000005016) #22	ENSAMXG00000035715	MPP4 (ENSAMXG00000005012) #23	tmem237b (ENSAMXG00000041701) #24	zp2l2 (ENSAMXG00000034751)	cyp20a1 (ENSAMXG00000004986)	abi2b (ENSAMXG00000035798)	itm2ba (ENSAMXG00000034379)	nudt15 (ENSAMXG00000039492)	sucla2 (ENSAMXG00000004980)	HTR2A (ENSAMXG00000004978)	ATP7B (ENSAMXG00000004971)	B3GALT1 (ENSAMXG00000025970)	ENSAMXG00000038514	scn1lab (ENSAMXG00000004964)	ENSAMXG00000039973
Electric eel	MODERN SPECIES	373	TBX19 (ENSEEEG00000010964)	iqcb1 (ENSEEEG00000010965)	ENSEEEG00000010966	ENSEEEG00000010969	kalrnb (ENSEEEG00000010973)	ENSEEEG00000010974	MAP3K2 (ENSEEEG00000010976)	cyp27c1 (ENSEEEG00000010979)	ercc3 (ENSEEEG00000010980)	wdr12 (ENSEEEG00000010992)	ENSEEEG00000010998	nop58 (ENSEEEG00000011002)	sumo1 (ENSEEEG00000011009)	fzd7b (ENSEEEG00000011013)	cdk15 (ENSEEEG00000011014) #21	ALS2 (ENSEEEG00000011020) #22	ENSEEEG00000011024	ddx17 (ENSEEEG00000011062)	gga1 (ENSEEEG00000012417)	ENSEEEG00000012456	ENSEEEG00000012457	ENSEEEG00000012458	ENSEEEG00000012460
Cyprinoidei	ANCESTRAL SPECIES	73	ENSGT00390000018525.a.b.e.a	ENSGT00940000160000	ENSGT00390000002188	ENSGT00390000017916	ENSGT00940000155248.vb	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000156884	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00930000150950.b	ENSGT00940000161395	ENSGT00940000153534.A	ENSGT00940000154319	ENSGT00940000158239.a.a.d	ENSGT00940000159606 #21	ENSGT00940000155861.C.e #22	ENSGT00940000156444.c #23	ENSGT00390000005159.j #24	ENSGT00940000163253.b.c.a	ENSGT00500000044939	ENSGT00940000156089.e.a	ENSGT00950000183115.b.a.m.b	ENSGT00390000003338	ENSGT00390000010170.a.b	ENSGT01050000244937.a.a.q	ENSGT00940000155749.d	ENSGT00940000156219.e.b	ENSGT00940000158313.b.f.b	ENSGT00530000063779.A.e.b	ENSGT01030000235214	ENSGT00940000163423.C.g.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	23	ENSGT00390000018525.a.b.e.a.b	ENSGT00940000160000.b	ENSGT00390000002188	ENSGT00390000017916.b	ENSGT00940000155248.vb.c	ENSGT00950000182905.a.a.a.a.a.b.d	ENSGT00940000156884.b	ENSGT00950000182905.a.b.f	ENSGT00390000002204.d	ENSGT00930000150950.b.b	ENSGT00940000161395.c	ENSGT00940000153534.A.u.b	ENSGT00940000154319	ENSGT00940000158239.a.a.d.b	ENSGT00940000159606.f #21	ENSGT00940000155861.C.e.g #22	ENSGT00940000156444.c.p #23	ENSGT00390000005159.j #24	ENSGT00500000044939.k.b	ENSGT00940000156089.e.a.i	ENSGT00950000183115.b.a.m.b.a	ENSGT00390000003338.w.a	ENSGT00390000010170.a.b.y	ENSGT01050000244937.a.a.q.b	ENSGT00940000155749.d.t	ENSGT00940000156219.e.b.c	ENSGT00530000063779.A.e.b.b	ENSGT00940000163423.C.g.b.g	ENSGT01030000235214.e	ENSGT00530000063608.B.b.b	ENSGT00940000155518.n.a
Cyprininae_a	ANCESTRAL SPECIES	30	ENSGT00940000160000.b	ENSGT00390000002188	ENSGT00940000155248.vb.d	ENSGT00390000017916.b	ENSGT00940000155248.vb.c	ENSGT00950000182905.a.a.a.a.a.b.d	ENSGT00940000156884.b	ENSGT00950000182905.a.b.f	ENSGT00390000002204.d	ENSGT00930000150950.b.b	ENSGT00940000161395.c	ENSGT00940000153534.A.u.b	ENSGT00940000154319	ENSGT00940000158239.a.a.d.b	ENSGT00940000159606.f #21	ENSGT00940000155861.C.e.g #22	ENSGT00940000156444.c.p #23	ENSGT00390000005159.j.d #24	ENSGT00940000163253.b.c.a.d	ENSGT00500000044939.k.b	ENSGT00940000156089.e.a.i	ENSGT00950000183115.b.a.m.b.a	ENSGT00390000003338.w.b	ENSGT00390000003338.w.a	ENSGT00390000010170.a.b.y	ENSGT01050000244937.a.a.q.b	ENSGT00940000155749.d.t	ENSGT00940000156219.e.b.c	ENSGT00530000063779.A.e.b.b	ENSGT00940000163423.C.g.b.g	ENSGT01030000235214.e
Golden-line barbel	MODERN SPECIES	33	ENSSGRG00000053199	ENSSGRG00000053200	ENSSGRG00000053201	ENSSGRG00000053208	kalrnb (ENSSGRG00000053217)	ENSSGRG00000053218	MAP3K2 (ENSSGRG00000053227)	cyp27c1 (ENSSGRG00000053231)	ercc3 (ENSSGRG00000053232)	wdr12 (ENSSGRG00000053233)	ENSSGRG00000053234	ENSSGRG00000053239	sumo1 (ENSSGRG00000053240)	fzd7b (ENSSGRG00000053242)	cdk15 (ENSSGRG00000053243) #21	ALS2 (ENSSGRG00000053244) #22	MPP4 (ENSSGRG00000053245) #23	tmem237b (ENSSGRG00000053246) #24	zp2l2 (ENSSGRG00000053247)	abi2b (ENSSGRG00000053250)	itm2ba (ENSSGRG00000053330)	itm2ba (ENSSGRG00000053331)	nudt15 (ENSSGRG00000053332)	sucla2 (ENSSGRG00000053333)	HTR2A (ENSSGRG00000053365)	ATP7B (ENSSGRG00000053367)	B3GALT1 (ENSSGRG00000053412)	XIRP2 (ENSSGRG00000053413)	scn1lab (ENSSGRG00000053418)	ENSSGRG00000053421	ENSSGRG00000053423
Common carp reference	MODERN SPECIES	10	iqcb1 (ENSCCRG00000011706)	ENSCCRG00000011689	ENSCCRG00000061632	kalrnb (ENSCCRG00000015973)	ENSCCRG00000007501	MAP3K2 (ENSCCRG00000038364)	ENSCCRG00000045614	cyp27c1 (ENSCCRG00000019898)	ercc3 (ENSCCRG00000020084)	wdr12 (ENSCCRG00000064894)	ENSCCRG00000071429	nop58 (ENSCCRG00000073472)	SUMO1 (ENSCCRG00000052988)	fzd7b (ENSCCRG00000063192)	cdk15 (ENSCCRG00000047046) #21	ALS2 (ENSCCRG00000047079) #22	MPP4 (ENSCCRG00000048085) #23	tmem237b (ENSCCRG00000048096) #24	cyp20a1 (ENSCCRG00000046550)	abi2b (ENSCCRG00000048101)	itm2ba (ENSCCRG00000048108)	sucla2 (ENSCCRG00000070969)	ENSCCRG00000070031	ENSCCRG00000001852	ENSCCRG00000078893	ENSCCRG00000055892	ENSCCRG00000001805	scn1lab (ENSCCRG00000001776)	ENSCCRG00000050277	ENSCCRG00000060693	ENSCCRG00000051291
Goldfish	MODERN SPECIES	46	ENSCARG00000000516	sft2d2b (ENSCARG00000000518)	TBX19 (ENSCARG00000000527)	iqcb1 (ENSCARG00000000538)	ENSCARG00000000558	ENSCARG00000000649	ENSCARG00000000958	nop58 (ENSCARG00000001078)	MAP3K2 (ENSCARG00000001309)	ercc3 (ENSCARG00000001397)	wdr12 (ENSCARG00000001441)	ENSCARG00000001451	sumo1 (ENSCARG00000001460)	fzd7b (ENSCARG00000001463)	cdk15 (ENSCARG00000001489) #21	ALS2 (ENSCARG00000001627) #22	MPP4 (ENSCARG00000002269) #23	cyp20a1 (ENSCARG00000002438)	abi2b (ENSCARG00000002803)	itm2ba (ENSCARG00000002902)	nudt15 (ENSCARG00000002927)	sucla2 (ENSCARG00000002972)	HTR2A (ENSCARG00000003093)	ATP7B (ENSCARG00000003423)	XIRP2 (ENSCARG00000010528)	scn1lab (ENSCARG00000010628)	ENSCARG00000011479	ENSCARG00000011490	ENSCARG00000011530	ENSCARG00000011675	ENSCARG00000013504
Cyprininae	ANCESTRAL SPECIES	20	ENSGT00390000014995.q.b	ENSGT00940000165420.h.a	ENSGT00940000161625.m	ENSGT00390000018525.a.b.e.a.a	ENSGT00940000160000.a	ENSGT00940000155248.vb.d	ENSGT00950000182905.a.a.a.a.a.b.c	ENSGT00940000156884.a	ENSGT00950000182905.a.b.e	ENSGT00390000002204.c	ENSGT00930000150950.b.a	ENSGT00940000161395.d	ENSGT00940000153534.A.v	ENSGT00940000158239.a.a.d.a	ENSGT00940000159606.e #21	ENSGT00940000155861.C.e.h #22	ENSGT00940000156444.c.o #23	ENSGT00940000163253.b.c.a.c	ENSGT00500000044939.k.a	ENSGT00940000156089.e.a.j	ENSGT00950000183115.b.a.m.b.b	ENSGT00390000003338.x	ENSGT00390000010170.a.b.z	ENSGT01050000244937.a.a.q.a	ENSGT00940000155749.d.s	ENSGT00940000156219.e.b.d	ENSGT00940000158313.b.f.b	ENSGT00530000063779.A.e.b.a	ENSGT01030000235214.f	ENSGT00940000163423.C.g.b.h	ENSGT00530000063608.B.b.a
Cyprininae_a	ANCESTRAL SPECIES	13	ENSGT00390000003896.d	ENSGT00390000014995.q.b	ENSGT00940000165420.h.a	ENSGT00940000161625.m	ENSGT00390000018525.a.b.e.a.a	ENSGT00940000160000.a	ENSGT00950000182905.a.a.a.a.a.b.c	ENSGT00940000156884.a	ENSGT00950000182905.a.b.e	ENSGT00390000002204.c	ENSGT00930000150950.b.a	ENSGT00940000161395.d	ENSGT00940000153534.A.v	ENSGT00940000158239.a.a.d.a	ENSGT00940000159606.e #21	ENSGT00940000155861.C.e.h #22	ENSGT00940000156444.c.o #23	ENSGT00390000005159.j.c #24	ENSGT00940000163253.b.c.a.c	ENSGT00500000044939.k.a	ENSGT00940000156089.e.a.j	ENSGT00950000183115.b.a.m.b.b	ENSGT00390000003338.x	ENSGT00390000010170.a.b.z	ENSGT01050000244937.a.a.q.a	ENSGT00940000155749.d.s	ENSGT00940000156219.e.b.d	ENSGT00940000158313.b.f.b	ENSGT00530000063779.A.e.b.a	ENSGT01030000235214.f	ENSGT00940000163423.C.g.b.h
Golden-line barbel	MODERN SPECIES	62	zgc:64065 (ENSSGRG00000031924)	sft2d2b (ENSSGRG00000031921)	ENSSGRG00000031920	ENSSGRG00000031919	KALRN (ENSSGRG00000031722)	ENSSGRG00000031677	MAP3K2 (ENSSGRG00000031660)	cyp27c1 (ENSSGRG00000031599)	ercc3 (ENSSGRG00000031398)	wdr12 (ENSSGRG00000031171)	ENSSGRG00000031163	nop58 (ENSSGRG00000030936)	ENSSGRG00000030932	fzd7b (ENSSGRG00000030931)	cdk15 (ENSSGRG00000030926) #21	ALS2 (ENSSGRG00000030626) #22	MPP4 (ENSSGRG00000030486) #23	tmem237b (ENSSGRG00000030485) #24	zp2l2 (ENSSGRG00000030484)	cyp20a1 (ENSSGRG00000030433)	abi2b (ENSSGRG00000030226)	itm2ba (ENSSGRG00000030225)	nudt15 (ENSSGRG00000030224)	sucla2 (ENSSGRG00000029813)	HTR2A (ENSSGRG00000029808)	ATP7B (ENSSGRG00000028705)	B3GALT1 (ENSSGRG00000028695)	ENSSGRG00000028694	ENSSGRG00000028693	ENSSGRG00000028692	scn1lab (ENSSGRG00000028690)
Common carp reference	MODERN SPECIES	16	ENSCCRG00000005514	ENSCCRG00000058701	ENSCCRG00000065509	ENSCCRG00000045306	kalrnb (ENSCCRG00000018094)	ENSCCRG00000018155	MAP3K2 (ENSCCRG00000041950)	cyp27c1 (ENSCCRG00000041350)	ercc3 (ENSCCRG00000041737)	wdr12 (ENSCCRG00000047029)	ENSCCRG00000067378	nop58 (ENSCCRG00000065019)	sumo1 (ENSCCRG00000045652)	fzd7b (ENSCCRG00000057373)	cdk15 (ENSCCRG00000062354) #21	ALS2 (ENSCCRG00000041937) #22	MPP4 (ENSCCRG00000042683) #23	tmem237b (ENSCCRG00000043283) #24	zp2l2 (ENSCCRG00000063620)	cyp20a1 (ENSCCRG00000048097)	abi2b (ENSCCRG00000060284)	itm2ba (ENSCCRG00000048714)	nudt15 (ENSCCRG00000048717)	sucla2 (ENSCCRG00000048723)	HTR2A (ENSCCRG00000048728)	ENSCCRG00000069681	ENSCCRG00000057743	ENSCCRG00000059510	scn1lab (ENSCCRG00000048804)	ENSCCRG00000050305	ENSCCRG00000022016
Goldfish	MODERN SPECIES	24	sft2d2b (ENSCARG00000033875)	ENSCARG00000033853	ENSCARG00000033848	ENSCARG00000033299	ENSCARG00000033117	ENSCARG00000033101	MAP3K2 (ENSCARG00000032497)	cyp27c1 (ENSCARG00000032390)	ercc3 (ENSCARG00000032225)	wdr12 (ENSCARG00000032179)	ENSCARG00000032169	nop58 (ENSCARG00000031870)	sumo1 (ENSCARG00000031848)	fzd7b (ENSCARG00000031842)	cdk15 (ENSCARG00000031750) #21	ALS2 (ENSCARG00000031640) #22	MPP4 (ENSCARG00000031051) #23	zp2l2 (ENSCARG00000030998)	cyp20a1 (ENSCARG00000030614)	abi2b (ENSCARG00000030359)	ENSCARG00000030334	itm2ba (ENSCARG00000030326)	sucla2 (ENSCARG00000028844)	HTR2A (ENSCARG00000028716)	ATP7B (ENSCARG00000023483)	B3GALT1 (ENSCARG00000023319)	XIRP2 (ENSCARG00000023297)	ENSCARG00000023279	scn1lab (ENSCARG00000012923)	ENSCARG00000012609	KCNH7 (ENSCARG00000012572)
Zebrafish	MODERN SPECIES	21	ENSDARG00000088058	iqcb1 (ENSDARG00000093431)	ENSDARG00000098734	kalrnb (ENSDARG00000063538)	ENSDARG00000044264	ENSDARG00000073764	MAP3K2 (ENSDARG00000062884)	cyp27c1 (ENSDARG00000092660)	ercc3 (ENSDARG00000002402)	wdr12 (ENSDARG00000003287)	ENSDARG00000087381	nop58 (ENSDARG00000104353)	sumo1 (ENSDARG00000044267)	fzd7b (ENSDARG00000027589)	cdk15 (ENSDARG00000006093) #21	ALS2 (ENSDARG00000076924) #22	MPP4 (ENSDARG00000076872) #23	ENSDARG00000075240	tmem237b (ENSDARG00000074248) #24	ENSDARG00000071183	zp2l2 (ENSDARG00000004898)	cyp20a1 (ENSDARG00000006040)	abi2b (ENSDARG00000014875)	itm2ba (ENSDARG00000007098)	nudt15 (ENSDARG00000113961)	sucla2 (ENSDARG00000005359)	HTR2A (ENSDARG00000058165)	ATP7B (ENSDARG00000058145)	B3GALT1 (ENSDARG00000079700)	XIRP2 (ENSDARG00000071113)	scn1lab (ENSDARG00000062744)
Osteoglossiformes	ANCESTRAL SPECIES	79	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00940000164909.c	ENSGT00390000004977.d.a	ENSGT00950000182895.a.b.v	ENSGT00950000182895.a.b.u.b	ENSGT00940000158193	ENSGT00510000047718.c.b	ENSGT00940000157267	ENSGT00940000156449.c	ENSGT00950000183046.a.a.fb	ENSGT00390000005530.a.a.k	ENSGT00930000150950.b	ENSGT00940000154319.c.a	ENSGT00940000158239.a.b.b	ENSGT00940000155861.C.e #22	ENSGT00940000156444.f #23	ENSGT00390000005159.k #24	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552.c.a.g	ENSGT00530000063873.B.f	ENSGT01030000234607.A.b	ENSGT00940000164110.b	ENSGT00950000183019.f.b.b.c	ENSGT00390000000862	ENSGT00940000155270.h	ENSGT00950000183214.a.b.a.b.f.b	ENSGT00940000161508.b	ENSGT00940000166348	ENSGT00940000155126.s.b
P. kingsleyae	MODERN SPECIES	35	atg9a (ENSPKIG00000009492)	ANKZF1 (ENSPKIG00000009427)	ENSPKIG00000009236	ENSPKIG00000009145	sumo3b (ENSPKIG00000009126)	ube2g2 (ENSPKIG00000009101)	TSPEAR (ENSPKIG00000009073)	ENSPKIG00000009015	BMPR2 (ENSPKIG00000008953)	fam117bb (ENSPKIG00000008905)	wdr12 (ENSPKIG00000008839)	sumo1 (ENSPKIG00000008789)	ENSPKIG00000008769	FZD7 (ENSPKIG00000008751)	ENSPKIG00000008738	ALS2 (ENSPKIG00000008582) #22	MPP4 (ENSPKIG00000008511) #23	TMEM237 (ENSPKIG00000008472) #24	cyp20a1 (ENSPKIG00000008410)	ABI2 (ENSPKIG00000008314)	RAPH1 (ENSPKIG00000008230)	ENSPKIG00000008189	ENSPKIG00000008149	retreg2 (ENSPKIG00000008116)	prkag3b (ENSPKIG00000008081)	cnppd1 (ENSPKIG00000008050)	NRP2 (ENSPKIG00000007999)	cpo (ENSPKIG00000007966)	ENSPKIG00000007941	fn1a (ENSPKIG00000006068)	ENSPKIG00000005246
Asian bonytongue	MODERN SPECIES	5	atg9a (ENSSFOG00015007618)	ANKZF1 (ENSSFOG00015007560)	ENSSFOG00015007347	ENSSFOG00015027566	sumo3a (ENSSFOG00015007119)	ube2g2 (ENSSFOG00015026166)	TSPEAR (ENSSFOG00015007048)	ENSSFOG00015006907	BMPR2 (ENSSFOG00015006844)	fam117bb (ENSSFOG00015032151)	ICA1L (ENSSFOG00015030869)	wdr12 (ENSSFOG00015006713)	ENSSFOG00015027483	SUMO1 (ENSSFOG00015025642)	FZD7 (ENSSFOG00015006669)	ALS2 (ENSSFOG00015006570) #22	MPP4 (ENSSFOG00015006525) #23	TMEM237 (ENSSFOG00015006497) #24	cyp20a1 (ENSSFOG00015006435)	ABI2 (ENSSFOG00015006375)	RAPH1 (ENSSFOG00015006320)	ENSSFOG00015025277	ENSSFOG00015006306	ENSSFOG00015006297	prkag3b (ENSSFOG00015006261)	cnppd1 (ENSSFOG00015006238)	NRP2 (ENSSFOG00015006142)	ENSSFOG00015027322	ENSSFOG00015006078	ENSSFOG00015031434	ENSSFOG00015006113
Clupeocephala	ANCESTRAL SPECIES	3	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a	ENSGT00950000182895.a.b.u.b	ENSGT00940000158193	ENSGT00510000047718.d	ENSGT00980000199010	ENSGT00940000156449.b.b	ENSGT00510000047718.c	ENSGT00940000157267	ENSGT00940000164964.b	ENSGT00940000156449.a	ENSGT00950000183046.a.a.fb	ENSGT00390000013916	ENSGT00940000158239.a.a	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156089.e.b	ENSGT00940000156089.f	ENSGT00940000156552.c.a	ENSGT00940000174369	ENSGT00940000178309	ENSGT00530000063873.B	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00940000156160.b.b	ENSGT00940000155270.i.a	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000161508.a
Euteleosteomorpha	ANCESTRAL SPECIES	289															ENSGT00940000158239.a.a	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156089.e.b	ENSGT00940000156089.f	ENSGT00940000156552.c.a	ENSGT00940000174369	ENSGT00940000178309	ENSGT00530000063873.B	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00940000156160.b.b
Euacanthomorphacea	ANCESTRAL SPECIES	140									ENSGT00940000156160.b.b	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000156552.c.a	ENSGT00940000158239.a.a	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156089.e.b
Percomorphaceae	ANCESTRAL SPECIES	29	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e	ENSGT00940000158239.a.a	ENSGT00940000155861.C.f #22
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000178293	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00940000153518.d.b.b.w.a	ENSGT00950000183078.a	ENSGT00940000168128	ENSGT00690000101915.i.a	ENSGT00940000161312
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000178293	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00940000168128	ENSGT00690000101915.i.a	ENSGT00940000161312
Eupercaria	ANCESTRAL SPECIES	25	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000178293	ENSGT00940000154389.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00940000168128	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
Tetraodontidae	ANCESTRAL SPECIES		ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a.y.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00940000153518.d.b.b.w.a	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT00940000154490.b	ENSGT00940000154490.a.a
Fugu	MODERN SPECIES		ENSTRUG00000029028	ENSTRUG00000029345	ENSTRUG00000026963	OR2346-3 (ENSTRUG00000030702)	ENSTRUG00000030048	ENSTRUG00000031198	ENSTRUG00000002940	ENSTRUG00000032249	ENSTRUG00000027817	ENSTRUG00000027013	ENSTRUG00000028712	ENSTRUG00000019867	ENSTRUG00000020946	ENSTRUG00000027840	fzd7b (ENSTRUG00000018054)	ALS2 (ENSTRUG00000018025) #22	ENSTRUG00000032475	ENSTRUG00000027312	kctd4 (ENSTRUG00000018010)	ENSTRUG00000024249	tpt1 (ENSTRUG00000017997)	ENSTRUG00000030582	RANBP2 (ENSTRUG00000024137)	ENSTRUG00000002264	tmem223 (ENSTRUG00000020983)	GCC2 (ENSTRUG00000002611)	SLC5A7 (ENSTRUG00000003293)	ENSTRUG00000003618	ENSTRUG00000003649	arl6 (ENSTRUG00000003716)	EPHA6 (ENSTRUG00000003966)
Tetraodon	MODERN SPECIES	13	pnkd (ENSTNIG00000010992)	gmppaa (ENSTNIG00000010993)	asic4a (ENSTNIG00000010994)	CHPF (ENSTNIG00000005621)	pdxka (ENSTNIG00000005620)	agpat3 (ENSTNIG00000005619)	ENSTNIG00000002973	ENSTNIG00000006121	ENSTNIG00000000688	ENSTNIG00000001245	ENSTNIG00000000335	ENSTNIG00000004008	ENSTNIG00000000480	ENSTNIG00000003782	fzd7b (ENSTNIG00000003781)	ALS2 (ENSTNIG00000003780) #22	SERP2 (ENSTNIG00000019747)	tsc22d1 (ENSTNIG00000003779)	GTF2F2 (ENSTNIG00000004440)	tpt1 (ENSTNIG00000004439)	ENSTNIG00000000318	RANBP2 (ENSTNIG00000004438)	LIMS1 (ENSTNIG00000004437)	GCC2 (ENSTNIG00000019849)	SLC5A7 (ENSTNIG00000004394)	arl6 (ENSTNIG00000004395)	ENSTNIG00000003594	ENSTNIG00000002728	STX19 (ENSTNIG00000003996)	EPHA3 (ENSTNIG00000016418)	C3orf38 (ENSTNIG00000004365)
Eupecaria_A	ANCESTRAL SPECIES	24	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000178293	ENSGT00940000154389.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00940000168128	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
Ballan wrasse	MODERN SPECIES	157	ENSLBEG00000001033	gmppaa (ENSLBEG00000001003)	pnkd (ENSLBEG00000000985)	ENSLBEG00000000971	dars1 (ENSLBEG00000000879)	cxcr4a (ENSLBEG00000000869)	asic4a (ENSLBEG00000000829)	CHPF (ENSLBEG00000000783)	pdxka (ENSLBEG00000000742)	agpat3 (ENSLBEG00000000684)	ENSLBEG00000000607	ENSLBEG00000000560	ENSLBEG00000000497	ENSLBEG00000000464	fzd7b (ENSLBEG00000000434)	ENSLBEG00000000340 #22	SERP2 (ENSLBEG00000000334)	zgc:65895 (ENSLBEG00000028055)	tsc22d1 (ENSLBEG00000028045)	kctd4 (ENSLBEG00000028038)	gtf2f2b (ENSLBEG00000028025)	tpt1 (ENSLBEG00000028007)	ENSLBEG00000028002	RANBP2 (ENSLBEG00000027979)	LIMS1 (ENSLBEG00000027941)	tmem223 (ENSLBEG00000027912)	ENSLBEG00000027903	ENSLBEG00000027889	SLC5A7 (ENSLBEG00000027876)	CLDN14 (ENSLBEG00000027863)	ENSLBEG00000027854
Eupecaria_B	ANCESTRAL SPECIES	24	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT01030000235834	ENSGT00940000153518.d.b.b.w.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
Perciformes	ANCESTRAL SPECIES	23	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l
Cottioidei	ANCESTRAL SPECIES	14	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT00940000154490.a.a
Lumpfish	MODERN SPECIES	13	pnkd (ENSCLMG00005013359)	ENSCLMG00005013358	gmppaa (ENSCLMG00005013345)	asic4a (ENSCLMG00005013344)	CHPF (ENSCLMG00005013343)	pdxka (ENSCLMG00005013331)	agpat3 (ENSCLMG00005013326)	ENSCLMG00005013324	ENSCLMG00005013322	ENSCLMG00005013319	ENSCLMG00005013318	ENSCLMG00005013317	ENSCLMG00005013315	ENSCLMG00005013314	fzd7b (ENSCLMG00005013313)	ALS2 (ENSCLMG00005013043) #22	SERP2 (ENSCLMG00005013036)	ENSCLMG00005013035	kctd4 (ENSCLMG00005013034)	ENSCLMG00005013029	tpt1 (ENSCLMG00005013027)	RANBP2 (ENSCLMG00005009168)	LIMS1 (ENSCLMG00005009132)	tmem223 (ENSCLMG00005009131)	GCC2 (ENSCLMG00005009130)	SLC5A7 (ENSCLMG00005009129)	CLDN14 (ENSCLMG00005009128)	ENSCLMG00005009127	ARL6 (ENSCLMG00005009125)	ENSCLMG00005009123	ENSCLMG00005009121
Stickleback	MODERN SPECIES	16	ENSGACG00000006974	ENSGACG00000006973	ENSGACG00000006971	ENSGACG00000006969	ENSGACG00000006966	ENSGACG00000006963	ENSGACG00000006961	ENSGACG00000006957	ENSGACG00000006952	ENSGACG00000006948	ENSGACG00000006947	ENSGACG00000006943	ENSGACG00000006941	ENSGACG00000006937	fzd7b (ENSGACG00000006935)	ALS2 (ENSGACG00000006911) #22	SERP2 (ENSGACG00000006904)	tsc22d1 (ENSGACG00000006889)	kctd4 (ENSGACG00000006886)	GTF2F2 (ENSGACG00000006880)	tpt1 (ENSGACG00000006855)	RANBP2 (ENSGACG00000006831)	LIMS1 (ENSGACG00000006826)	tmem223 (ENSGACG00000006823)	GCC2 (ENSGACG00000006813)	SLC5A7 (ENSGACG00000006805)	CLDN14 (ENSGACG00000006803)	ENSGACG00000006797	arl6 (ENSGACG00000006779)	EPHA6 (ENSGACG00000006770)	STX19 (ENSGACG00000006760)
Channel bull blenny	MODERN SPECIES	13	pnkd (ENSCGOG00000007384)	gmppaa (ENSCGOG00000007399)	ENSCGOG00000007919	asic4a (ENSCGOG00000007921)	CHPF (ENSCGOG00000007924)	pdxka (ENSCGOG00000007930)	agpat3 (ENSCGOG00000007961)	ENSCGOG00000008087	ENSCGOG00000008089	ENSCGOG00000008094	ENSCGOG00000008098	ENSCGOG00000008109	ENSCGOG00000008111	ENSCGOG00000008116	fzd7b (ENSCGOG00000008130)	ALS2 (ENSCGOG00000008155) #22	SERP2 (ENSCGOG00000008626)	ENSCGOG00000008635	gtf2f2b (ENSCGOG00000008637)	kctd4 (ENSCGOG00000008640)	tpt1 (ENSCGOG00000008641)	RANBP2 (ENSCGOG00000008649)	ENSCGOG00000008875	GCC2 (ENSCGOG00000009008)	tmem223 (ENSCGOG00000009012)	SLC5A7 (ENSCGOG00000009014)	CLDN14 (ENSCGOG00000009022)	ENSCGOG00000009025	arl6 (ENSCGOG00000009029)	EPHA6 (ENSCGOG00000009049)	STX19 (ENSCGOG00000009205)
Eupecaria_C	ANCESTRAL SPECIES	24	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT01030000235834	ENSGT00940000153518.d.b.b.w.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	24	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT01030000235834	ENSGT00940000153518.d.b.b.w.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
European seabass	MODERN SPECIES	5	ENSDLAG00005000284	ENSDLAG00005031702	ENSDLAG00005028228	ENSDLAG00005000290	ENSDLAG00005000293	ENSDLAG00005002446	ENSDLAG00005010357	ENSDLAG00005034493	ENSDLAG00005002629	ENSDLAG00005030806	ENSDLAG00005032391	ENSDLAG00005003525	ENSDLAG00005005716	ENSDLAG00005021904	ENSDLAG00005032071	ENSDLAG00005000310 #22	ENSDLAG00005030599	ENSDLAG00005031930	tsc22d1 (ENSDLAG00005030955)	gtf2f2b (ENSDLAG00005030100)	kctd4 (ENSDLAG00005031353)	TPT1 (ENSDLAG00005000354)	RANBP2 (ENSDLAG00005000387)	ENSDLAG00005000659	ENSDLAG00005000736	GCC2 (ENSDLAG00005000740)	ENSDLAG00005026419	ENSDLAG00005000767	ENSDLAG00005000770	ENSDLAG00005000773	ENSDLAG00005000778
Large yellow croaker	MODERN SPECIES	490	ENSLCRG00005012260	ENSLCRG00005012261	ENSLCRG00005012262	ENSLCRG00005012264	ENSLCRG00005012272	ENSLCRG00005012274	ENSLCRG00005012276	ENSLCRG00005012277	ENSLCRG00005012278	ENSLCRG00005012280	ENSLCRG00005012282	ENSLCRG00005012283	ENSLCRG00005012290	ENSLCRG00005012292	fzd7b (ENSLCRG00005012294)	ALS2 (ENSLCRG00005012299) #22	SERP2 (ENSLCRG00005012697)	zgc:65895 (ENSLCRG00005012700)	tsc22d1 (ENSLCRG00005012701)	gtf2f2b (ENSLCRG00005012702)	kctd4 (ENSLCRG00005012705)	tpt1 (ENSLCRG00005012706)	RANBP2 (ENSLCRG00005012708)	LIMS1 (ENSLCRG00005012870)	GCC2 (ENSLCRG00005013409)	tmem223 (ENSLCRG00005013446)	SLC5A7 (ENSLCRG00005013448)	CLDN14 (ENSLCRG00005013451)	ENSLCRG00005013453	arl6 (ENSLCRG00005013456)	ENSLCRG00005013472
Gilthead seabream	MODERN SPECIES	23	ENSSAUG00010015086	ENSSAUG00010015091	ENSSAUG00010015092	heg1 (ENSSAUG00010015096)	slc12a8 (ENSSAUG00010015099)	znf148 (ENSSAUG00010015104)	ENSSAUG00010015105	asmt (ENSSAUG00010015107)	akap17a (ENSSAUG00010015110)	SOWAHC (ENSSAUG00010015113)	septin10 (ENSSAUG00010015128)	SH3RF3 (ENSSAUG00010016663)	edar (ENSSAUG00010016667)	ENSSAUG00010016672	FZD7 (ENSSAUG00010016676)	ALS2 (ENSSAUG00010016679) #22	SERP2 (ENSSAUG00010016971)	ENSSAUG00010016974	tsc22d1 (ENSSAUG00010016978)	gtf2f2b (ENSSAUG00010016982)	kctd4 (ENSSAUG00010016985)	tpt1 (ENSSAUG00010016986)	RANBP2 (ENSSAUG00010017044)	ENSSAUG00010019321	GCC2 (ENSSAUG00010019327)	tmem223 (ENSSAUG00010019333)	SLC5A7 (ENSSAUG00010019334)	CLDN14 (ENSSAUG00010019337)	ENSSAUG00010019338	arl6 (ENSSAUG00010019340)	EPHA6 (ENSSAUG00010019347)
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00390000006051	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00940000154389.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000178293	ENSGT00940000153518.d.b.a.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000164065	ENSGT00690000101915.i.a	ENSGT00940000161312
Anabantaria	ANCESTRAL SPECIES	14	ENSGT01050000244848.C.a	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00390000006051	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00940000154389.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00950000183078.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00940000164065	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
Zig-zag eel	MODERN SPECIES	13	ENSMAMG00000017553	ENSMAMG00000024374	ENSMAMG00000027536	ENSMAMG00000017610	ENSMAMG00000027227	ENSMAMG00000025125	ENSMAMG00000017668	ENSMAMG00000027750	ENSMAMG00000026622	ENSMAMG00000027484	ENSMAMG00000026289	ENSMAMG00000028534	ENSMAMG00000027200	ENSMAMG00000026242	ENSMAMG00000017802	ENSMAMG00000028644 #22	ENSMAMG00000017820	ENSMAMG00000017841	ENSMAMG00000028596	tsc22d1 (ENSMAMG00000017855)	ENSMAMG00000017867	kctd4 (ENSMAMG00000017887)	RANBP2 (ENSMAMG00000017900)	ENSMAMG00000017963	GCC2 (ENSMAMG00000017998)	ENSMAMG00000018007	ENSMAMG00000018012	CLDN14 (ENSMAMG00000027939)	ENSMAMG00000018046	ENSMAMG00000018088	ENSMAMG00000018107
Anabantoidei	ANCESTRAL SPECIES	13	ENSGT00940000155953	ENSGT00390000002862.ub	ENSGT00390000002862.tb	ENSGT00940000159262	ENSGT01050000244848.C.a	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00940000155861.C.f #22	ENSGT00390000006051	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00940000154389.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l
Siamese fighting fish	MODERN SPECIES	11	ENSBSLG00000016976	ENSBSLG00000016961	ENSBSLG00000016953	ENSBSLG00000016944	ENSBSLG00000016921	ENSBSLG00000016912	ENSBSLG00000016904	ENSBSLG00000016885	ENSBSLG00000016873	ENSBSLG00000016865	ENSBSLG00000016857	ENSBSLG00000016848	ENSBSLG00000016844	ENSBSLG00000016817	fzd7b (ENSBSLG00000026262)	ALS2 (ENSBSLG00000026252) #22	tpt1 (ENSBSLG00000026245)	ENSBSLG00000026244	zgc:65895 (ENSBSLG00000026242)	tsc22d1 (ENSBSLG00000026241)	kctd4 (ENSBSLG00000026240)	ENSBSLG00000026239	ENSBSLG00000026237	RANBP2 (ENSBSLG00000026221)	ENSBSLG00000026151	tmem223 (ENSBSLG00000026128)	GCC2 (ENSBSLG00000026119)	SLC5A7 (ENSBSLG00000026110)	ENSBSLG00000026105	ENSBSLG00000026101	ENSBSLG00000026096
Climbing perch	MODERN SPECIES	12	ENSATEG00000026483	ENSATEG00000028331	ENSATEG00000027586	ENSATEG00000027532	ENSATEG00000026565	ENSATEG00000026073	ENSATEG00000027432	ENSATEG00000002091	ENSATEG00000025358	ENSATEG00000028912	ENSATEG00000027371	ENSATEG00000026211	ENSATEG00000029171	ENSATEG00000001865	ENSATEG00000001849	ENSATEG00000001825 #22	ENSATEG00000001812	ENSATEG00000027708	TSC22D1 (ENSATEG00000030065)	TSC22D1 (ENSATEG00000001776)	kctd4 (ENSATEG00000001767)	ENSATEG00000001727	ENSATEG00000001716	ENSATEG00000001675	ENSATEG00000001652	ENSATEG00000001641	ENSATEG00000001593	ENSATEG00000001572	ENSATEG00000001469	ENSATEG00000001425	ENSATEG00000012170
Carangaria	ANCESTRAL SPECIES	12	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00390000006051	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00940000154389.a.o.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000178293	ENSGT00940000154389.a.p	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312
Carangaria_A	ANCESTRAL SPECIES	11	ENSGT01050000244848.C.a	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00390000006051	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00940000154389.a.o.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT00940000154490.a.a	ENSGT01050000244948.c.a	ENSGT00940000157088
Seriola	ANCESTRAL SPECIES	34	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a.b	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00390000006051	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	MODERN SPECIES	2542				asic4a (ENSSLDG00000022741)	CHPF (ENSSLDG00000022733)	pdxka (ENSSLDG00000022697)	agpat3 (ENSSLDG00000022654)	ENSSLDG00000022616	ENSSLDG00000022590	ENSSLDG00000022571	ENSSLDG00000022554	ENSSLDG00000022546	ENSSLDG00000022529	ENSSLDG00000022516	ENSSLDG00000022505 #22	ALS2 (ENSSLDG00000022428) #22	tpt1 (ENSSLDG00000022402)	ENSSLDG00000022398	tsc22d1 (ENSSLDG00000022390)	kctd4 (ENSSLDG00000022382)	gtf2f2b (ENSSLDG00000022352)
Yellowtail amberjack	MODERN SPECIES	2542					asic4a (ENSSLDG00000022741)	CHPF (ENSSLDG00000022733)	pdxka (ENSSLDG00000022697)	agpat3 (ENSSLDG00000022654)	ENSSLDG00000022616	ENSSLDG00000022590	ENSSLDG00000022571	ENSSLDG00000022554	ENSSLDG00000022546	ENSSLDG00000022529	ENSSLDG00000022516	ENSSLDG00000022505 #22	ALS2 (ENSSLDG00000022428) #22	tpt1 (ENSSLDG00000022402)	ENSSLDG00000022398	tsc22d1 (ENSSLDG00000022390)	kctd4 (ENSSLDG00000022382)	gtf2f2b (ENSSLDG00000022352)
Greater amberjack	MODERN SPECIES	21	gmppaa (ENSSDUG00000012554)	ENSSDUG00000012634	asic4a (ENSSDUG00000012646)	CHPF (ENSSDUG00000012678)	pdxka (ENSSDUG00000012694)	agpat3 (ENSSDUG00000012729)	ENSSDUG00000012766	ENSSDUG00000012798	ENSSDUG00000012808	ENSSDUG00000012820	ENSSDUG00000012829	ENSSDUG00000012854	ENSSDUG00000012858	ENSSDUG00000012884	fzd7b (ENSSDUG00000012894)	ALS2 (ENSSDUG00000012907) #22	tpt1 (ENSSDUG00000013034)	ENSSDUG00000013051	tsc22d1 (ENSSDUG00000013067)	gtf2f2b (ENSSDUG00000013087)	kctd4 (ENSSDUG00000013143)	RANBP2 (ENSSDUG00000013160)	LIMS1 (ENSSDUG00000013263)	GCC2 (ENSSDUG00000013338)	tmem223 (ENSSDUG00000013372)	SLC5A7 (ENSSDUG00000013380)	CLDN14 (ENSSDUG00000013404)	ENSSDUG00000013412	arl6 (ENSSDUG00000013427)	EPHA6 (ENSSDUG00000013440)	STX19 (ENSSDUG00000013490)
Barramundi perch	MODERN SPECIES	204	cxcr4a (ENSLCAG00010011228)	dars1 (ENSLCAG00010011290)	pnkd (ENSLCAG00010011550)	gmppaa (ENSLCAG00010011601)	ENSLCAG00010011644	asic4a (ENSLCAG00010011647)	CHPF (ENSLCAG00010011654)	pdxka (ENSLCAG00010011671)	agpat3 (ENSLCAG00010011701)	ENSLCAG00010011713	ENSLCAG00010011720	ENSLCAG00010011726	ENSLCAG00010011729	ENSLCAG00010011731	FZD7 (ENSLCAG00010011736)	ALS2 (ENSLCAG00010011744) #22	tpt1 (ENSLCAG00010011749)
Pleuronectoidei	ANCESTRAL SPECIES	9	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00390000006051	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00940000154389.a.o.a	ENSGT00940000178293	ENSGT00940000154389.a.p	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
Tongue sole	MODERN SPECIES	7	ENSCSEG00000013951	gmppaa (ENSCSEG00000013921)	asic4a (ENSCSEG00000013878)	CHPF (ENSCSEG00000013861)	pdxka (ENSCSEG00000013844)	agpat3 (ENSCSEG00000013831)	ENSCSEG00000013817	ENSCSEG00000013813	ENSCSEG00000013802	ENSCSEG00000013794	ENSCSEG00000013770	ENSCSEG00000013746	ENSCSEG00000013741	ENSCSEG00000013737	fzd7b (ENSCSEG00000013735)	ENSCSEG00000013644 #22	tpt1 (ENSCSEG00000013637)	ENSCSEG00000013630	stxbp5l (ENSCSEG00000013403)	poglut2 (ENSCSEG00000013373)	ENSCSEG00000013366	nepro (ENSCSEG00000013356)	RALB (ENSCSEG00000013345)	SERP2 (ENSCSEG00000013339)	zgc:65895 (ENSCSEG00000013332)	tsc22d1 (ENSCSEG00000013330)	kctd4 (ENSCSEG00000013325)	gtf2f2b (ENSCSEG00000013301)	RANBP2 (ENSCSEG00000013280)	ENSCSEG00000013230	tmem223 (ENSCSEG00000013222)
Turbot	MODERN SPECIES	5	ENSSMAG00000006812	gmppaa (ENSSMAG00000006829)	ENSSMAG00000006899	asic4a (ENSSMAG00000006912)	CHPF (ENSSMAG00000033841)	ENSSMAG00000006966	ENSSMAG00000007002	ENSSMAG00000031335	ENSSMAG00000027464	ENSSMAG00000007025	ENSSMAG00000007065	ENSSMAG00000037976	ENSSMAG00000007095	ENSSMAG00000028695	ENSSMAG00000007144	ENSSMAG00000007166 #22	tpt1 (ENSSMAG00000026887)	ENSSMAG00000007293	ENSSMAG00000037836	ENSSMAG00000023827	ENSSMAG00000007317	kctd4 (ENSSMAG00000007327)	ENSSMAG00000007331	ENSSMAG00000007375	ENSSMAG00000007384	ENSSMAG00000007445	ENSSMAG00000007479	ENSSMAG00000007494	ENSSMAG00000007525	ENSSMAG00000007540	ENSSMAG00000007588
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000178293	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00940000168128	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
Atherinomorphae	ANCESTRAL SPECIES	13	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000178293	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00940000168128	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
Cyprinodontiformes	ANCESTRAL SPECIES	15	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000178293	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00940000168128	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
Aplocheiloidei	ANCESTRAL SPECIES	6	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00940000168128	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l
Turquoise killifish	MODERN SPECIES	1623	ENSNFUG00015023884	ENSNFUG00015023886	ENSNFUG00015023890	ASIC4 (ENSNFUG00015023901)	CHPFA (ENSNFUG00015023919)	pdxka (ENSNFUG00015023923)	AGPAT3 (ENSNFUG00015023944)	ENSNFUG00015023950	ENSNFUG00015023952	ENSNFUG00015023953	ENSNFUG00015023955	ENSNFUG00015023958	ENSNFUG00015023961	ENSNFUG00015004783	fzd7b (ENSNFUG00015004789)	ALS2 (ENSNFUG00015004847) #22	SERP2 (ENSNFUG00015004953)	zgc:65895 (ENSNFUG00015004966)	tsc22d1 (ENSNFUG00015004972)	KCTD4 (ENSNFUG00015004978)	gtf2f2b (ENSNFUG00015004982)	ENSNFUG00015004998	ENSNFUG00015005002	ENSNFUG00015005006	COL5A2 (ENSNFUG00015005052)	GULP1 (ENSNFUG00015005561)	asmt (ENSNFUG00015005631)	ENSNFUG00015005649	DHRSX (ENSNFUG00015005653)	ENSNFUG00015005659	ENSNFUG00015005665
Mangrove rivulus	MODERN SPECIES	74													ENSKMAG00000001404	ENSKMAG00000001400	fzd7b (ENSKMAG00000001382)	ENSKMAG00000001285 #22	SERP2 (ENSKMAG00000001257)	tsc22d1 (ENSKMAG00000001234)	kctd4 (ENSKMAG00000001225)	ENSKMAG00000001196	tpt1 (ENSKMAG00000001185)	RANBP2 (ENSKMAG00000001158)	ENSKMAG00000001080	tmem223 (ENSKMAG00000001055)	ENSKMAG00000001011	ENSKMAG00000000966	SLC5A7 (ENSKMAG00000000920)	CLDN14 (ENSKMAG00000000905)	ENSKMAG00000000860	arl6 (ENSKMAG00000000815)	EPHA6 (ENSKMAG00000000783)
Cyprinodontoidei	ANCESTRAL SPECIES	13	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000178293	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l
Poeciliinae	ANCESTRAL SPECIES	25	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a.i.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT00940000154490.a.a
Poecilia	ANCESTRAL SPECIES	13	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a.i.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT00940000154490.a.a
NAME_6	ANCESTRAL SPECIES	80	ENSGT01050000244848.C.a	ENSGT01030000234618.F	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT00940000157018	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a.i.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT00940000154490.a.a
Amazon molly	MODERN SPECIES	335							CHPF (ENSPFOG00000008350)	pdxka (ENSPFOG00000008244)	agpat3 (ENSPFOG00000008059)	ENSPFOG00000020194	ENSPFOG00000008045	or64d1 (ENSPFOG00000022223)	ENSPFOG00000021955	ENSPFOG00000020193	fzd7b (ENSPFOG00000020192)	ENSPFOG00000007870 #22	SERP2 (ENSPFOG00000007861)	zgc:65895 (ENSPFOG00000007803)	kctd4 (ENSPFOG00000020191)	kctd4 (ENSPFOG00000020190)	ENSPFOG00000007771	tpt1 (ENSPFOG00000007677)	RANBP2 (ENSPFOG00000007377)	ENSPFOG00000007252	tmem223 (ENSPFOG00000020189)	GCC2 (ENSPFOG00000006910)	SLC5A7 (ENSPFOG00000006835)	SLC5A7 (ENSPFOG00000006737)	CLDN14 (ENSPFOG00000006712)	ENSPFOG00000006578	arl6 (ENSPFOG00000006540)
Sailfin molly	MODERN SPECIES	389							CHPF (ENSPLAG00000012132)	pdxka (ENSPLAG00000012167)	agpat3 (ENSPLAG00000012197)	ENSPLAG00000012204	ENSPLAG00000012228	ENSPLAG00000012248	ENSPLAG00000012252	ENSPLAG00000012264	fzd7b (ENSPLAG00000012273)	ALS2 (ENSPLAG00000012315) #22	SERP2 (ENSPLAG00000012337)	tsc22d1 (ENSPLAG00000012340)	kctd4 (ENSPLAG00000012351)	gtf2f2b (ENSPLAG00000012356)	tpt1 (ENSPLAG00000012361)	RANBP2 (ENSPLAG00000012373)
Guppy	MODERN SPECIES	450	TMBIM1 (ENSPREG00000014447)	pnkd (ENSPREG00000014434)	ENSPREG00000014419	gmppaa (ENSPREG00000014364)	asic4a (ENSPREG00000014248)	ENSPREG00000014242	CHPF (ENSPREG00000014235)	pdxka (ENSPREG00000014190)	agpat3 (ENSPREG00000014169)	ENSPREG00000014153	ENSPREG00000014140	or64d1 (ENSPREG00000014132)	ENSPREG00000014109	ENSPREG00000014087	fzd7b (ENSPREG00000014079)	ALS2 (ENSPREG00000014013) #22	zgc:65895 (ENSPREG00000013994)	tsc22d1 (ENSPREG00000013988)	ENSPREG00000013982	kctd4 (ENSPREG00000013980)	gtf2f2b (ENSPREG00000013804)	tpt1 (ENSPREG00000013599)	RANBP2 (ENSPREG00000013331)	ENSPREG00000013239	tmem223 (ENSPREG00000013214)	GCC2 (ENSPREG00000013142)	SLC5A7 (ENSPREG00000013103)	ENSPREG00000013088	ENSPREG00000013074	arl6 (ENSPREG00000013042)	EPHA6 (ENSPREG00000012989)
Platyfish	MODERN SPECIES	21	dars1 (ENSXMAG00000003657)	TMBIM1 (ENSXMAG00000024690)	ENSXMAG00000023182	gmppaa (ENSXMAG00000003625)	asic4a (ENSXMAG00000003624)	CHPF (ENSXMAG00000003616)	PDXK (ENSXMAG00000003609)	agpat3 (ENSXMAG00000003600)	ENSXMAG00000020392	ENSXMAG00000003594	ENSXMAG00000027179	or64d1 (ENSXMAG00000019623)	ENSXMAG00000024839	ENSXMAG00000020391	fzd7b (ENSXMAG00000020390)	ALS2 (ENSXMAG00000003567) #22	ENSXMAG00000003558	tsc22d1 (ENSXMAG00000003554)	kctd4 (ENSXMAG00000020389)	gtf2f2b (ENSXMAG00000003551)	tpt1 (ENSXMAG00000028654)	RANBP2 (ENSXMAG00000003519)	ENSXMAG00000023681	tmem223 (ENSXMAG00000003506)	ENSXMAG00000003483	SLC5A7 (ENSXMAG00000003469)	ENSXMAG00000024329	ENSXMAG00000003455	arl6 (ENSXMAG00000003438)	EPHA6 (ENSXMAG00000023223)	STX19 (ENSXMAG00000021391)
NAME_4	ANCESTRAL SPECIES	131						ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183023.A.e.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000178293	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT00940000154490.a.a
Mummichog	MODERN SPECIES	1060														ENSFHEG00000001364	fzd7b (ENSFHEG00000001366)	ENSFHEG00000001371 #22
Sheepshead minnow	MODERN SPECIES	189	irgq2 (ENSCVAG00000015303)	ENSCVAG00000015324	ENSCVAG00000015335	ENSCVAG00000015345	ethe1 (ENSCVAG00000015391)	ethe1 (ENSCVAG00000015428)	ENSCVAG00000015446	drd2l (ENSCVAG00000015585)	xrcc1 (ENSCVAG00000000899)	ENSCVAG00000015612	ENSCVAG00000015628	ENSCVAG00000000399	ENSCVAG00000015682	ENSCVAG00000015685	fzd7b (ENSCVAG00000015698)	ALS2 (ENSCVAG00000015766) #22	SERP2 (ENSCVAG00000015785)	tsc22d1 (ENSCVAG00000015799)	kctd4 (ENSCVAG00000015808)	gtf2f2b (ENSCVAG00000015827)	tpt1 (ENSCVAG00000015840)	ENSCVAG00000015861	ENSCVAG00000016031	RANBP2 (ENSCVAG00000016050)	ENSCVAG00000016094	tmem223 (ENSCVAG00000016107)	ENSCVAG00000016119	ENSCVAG00000016134	SLC5A7 (ENSCVAG00000016151)	CLDN14 (ENSCVAG00000016158)	ENSCVAG00000016224
Oryzias	ANCESTRAL SPECIES	10	ENSGT00390000012446	ENSGT00390000007295	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00910000148192	ENSGT00390000002215.i.a	ENSGT01030000234565.a.b	ENSGT00530000063607.b.j.a	ENSGT00390000005581.b	ENSGT00390000005550	ENSGT00940000154014.b.b	ENSGT00940000155466.e.b	ENSGT00950000183023.A.e.a	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000178293	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT00940000154490.a.a
Oryzias_a	ANCESTRAL SPECIES	45	ENSGT00390000015143	ENSGT01020000230587	ENSGT00390000012446	ENSGT00390000007295	ENSGT00390000017045	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00390000002215.i.a	ENSGT00530000063607.b.j.a	ENSGT00390000005581.b	ENSGT00390000005550	ENSGT00940000154014.b.b	ENSGT00940000155466.e.b	ENSGT00950000183023.A.e.a	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051.y	ENSGT00940000154389.a	ENSGT00940000178293	ENSGT00940000153518.d.b.a.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT00940000154490.a.a
Japanese Medaka HdrR	MODERN SPECIES	13	ENSORLG00000023515	asnsd1 (ENSORLG00000015281)	zgc:136439 (ENSORLG00000015293)	SYMPK (ENSORLG00000015338)	SLC35F5 (ENSORLG00000015361)	gpr39 (ENSORLG00000028565)	LYPD1 (ENSORLG00000027780)	ENSORLG00000021805	ftcdnl1 (ENSORLG00000015376)	ENSORLG00000023395	zgc:153521 (ENSORLG00000015386)	stk17b (ENSORLG00000015401)	ENSORLG00000015420	ENSORLG00000015427	fzd7b (ENSORLG00000015430)	ENSORLG00000015458 #22	SERP2 (ENSORLG00000026720)	tsc22d1 (ENSORLG00000024185)	GTF2F2 (ENSORLG00000015486)	kctd4 (ENSORLG00000015490)	tpt1 (ENSORLG00000015494)	RANBP2 (ENSORLG00000015523)	ENSORLG00000024636	ENSORLG00000015535	ENSORLG00000015551	tmem223 (ENSORLG00000026765)	ENSORLG00000015563	ENSORLG00000027964	ENSORLG00000015571	ENSORLG00000015588	EPHA6 (ENSORLG00000015611)
Chinese medaka	MODERN SPECIES	703	ENSOSIG00000016413	STAT4 (ENSOSIG00000016441)	wdr75 (ENSOSIG00000016489)	slc40a1 (ENSOSIG00000016508)	ENSOSIG00000016512	asnsd1 (ENSOSIG00000016513)	zgc:136439 (ENSOSIG00000000711)	gpr39 (ENSOSIG00000000715)	ENSOSIG00000000716	ftcdnl1 (ENSOSIG00000000727)	zgc:153521 (ENSOSIG00000000733)	stk17b (ENSOSIG00000000738)	HECW2 (ENSOSIG00000000849)	or62c1 (ENSOSIG00000005503)	fzd7b (ENSOSIG00000005504)	ALS2 (ENSOSIG00000005507) #22	SERP2 (ENSOSIG00000005516)	tsc22d1 (ENSOSIG00000005518)	gtf2f2b (ENSOSIG00000005519)	kctd4 (ENSOSIG00000005520)	tpt1 (ENSOSIG00000005521)	RANBP2 (ENSOSIG00000005523)	ENSOSIG00000006473	ENSOSIG00000006487	ENSOSIG00000007248	tmem223 (ENSOSIG00000007251)	SLC5A7 (ENSOSIG00000007252)	CLDN14 (ENSOSIG00000007253)	ENSOSIG00000007255	arl6 (ENSOSIG00000007257)	STX19 (ENSOSIG00000007258)
Indian medaka	MODERN SPECIES	18	asnsd1 (ENSOMEG00000000595)	zgc:136439 (ENSOMEG00000022524)	SYMPK (ENSOMEG00000022561)	ENSOMEG00000022582	SLC35F5 (ENSOMEG00000022602)	gpr39 (ENSOMEG00000022590)	LYPD1 (ENSOMEG00000022612)	ENSOMEG00000022679	ftcdnl1 (ENSOMEG00000022700)	zgc:153521 (ENSOMEG00000022708)	stk17b (ENSOMEG00000022716)	HECW2 (ENSOMEG00000022762)	ENSOMEG00000022778	ENSOMEG00000022798	fzd7b (ENSOMEG00000022806)	ENSOMEG00000022822 #22	SERP2 (ENSOMEG00000022833)	tsc22d1 (ENSOMEG00000022846)	kctd4 (ENSOMEG00000022865)	gtf2f2b (ENSOMEG00000022887)	tpt1 (ENSOMEG00000022911)	RANBP2 (ENSOMEG00000022969)	ENSOMEG00000023002	ENSOMEG00000023051	tmem223 (ENSOMEG00000023070)	ENSOMEG00000023094	SLC5A7 (ENSOMEG00000023109)	CLDN14 (ENSOMEG00000023116)	ENSOMEG00000023140	arl6 (ENSOMEG00000023152)	EPHA6 (ENSOMEG00000023187)
Ovalentaria_B	ANCESTRAL SPECIES	12	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT01030000235834	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000168128	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
Cichlidae	ANCESTRAL SPECIES	14	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.b	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT00940000154490.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a.b	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a.a.b	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.b	ENSGT00950000183023.A.f.a.a.a.e.a	ENSGT00950000183023.A.f.a.a.a.f.b.a	ENSGT00950000183023.A.f.a.a.a.f.a.b	ENSGT00950000183023.A.f.a.a.a.f.b.b	ENSGT00950000183023.A.f.a.a.a.e.b	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183048.b.b.b.c.a.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT01030000235834	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000168128	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a.b	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.b	ENSGT00950000183023.A.f.a.a.a.e.a	ENSGT00950000183023.A.f.a.a.a.f.b.a	ENSGT00950000183023.A.f.a.a.a.f.a.b	ENSGT00950000183023.A.f.a.a.a.f.b.b	ENSGT00950000183023.A.f.a.a.a.e.b	ENSGT01030000234640.a.a.c.a	ENSGT00950000183048.b.b.b.c.a.a.b.a	ENSGT00950000183023.A.e.a	ENSGT00950000183048.b.b.b.c.a.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT00940000154490.a.a
Lyretail cichlid	MODERN SPECIES	380							ENSNBRG00000005215	ENSNBRG00000005188	ENSNBRG00000005165	ENSNBRG00000005129	ENSNBRG00000005094	ENSNBRG00000005080	ENSNBRG00000005066	ENSNBRG00000005051	fzd7b (ENSNBRG00000005043)	ENSNBRG00000004970 #22	ENSNBRG00000004955	tsc22d1 (ENSNBRG00000004926)	kctd4 (ENSNBRG00000004910)	gtf2f2b (ENSNBRG00000004659)	tpt1 (ENSNBRG00000004611)	RANBP2 (ENSNBRG00000004587)	ENSNBRG00000004549	tmem223 (ENSNBRG00000004529)	GCC2 (ENSNBRG00000004481)	SLC5A7 (ENSNBRG00000004434)	CLDN14 (ENSNBRG00000004421)	ENSNBRG00000004391	arl6 (ENSNBRG00000004364)	EPHA6 (ENSNBRG00000003486)	STX19 (ENSNBRG00000003279)
Haplochromini	ANCESTRAL SPECIES	19	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a.b	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.b	ENSGT00950000183023.A.f.a.a.a.e.a	ENSGT00950000183023.A.f.a.a.a.f.b.a	ENSGT00950000183023.A.f.a.a.a.f.a.b	ENSGT00950000183023.A.f.a.a.a.f.b.b	ENSGT00950000183023.A.f.a.a.a.e.b	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183048.b.b.b.c.a.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT00940000154490.a.a
Burton s mouthbrooder	MODERN SPECIES	558												ENSHBUG00000002598	ENSHBUG00000002611	ENSHBUG00000002620	fzd7b (ENSHBUG00000002625)	ALS2 (ENSHBUG00000002655) #22	SERP2 (ENSHBUG00000000046)	ENSHBUG00000002675	tsc22d1 (ENSHBUG00000002680)	kctd4 (ENSHBUG00000002683)	gtf2f2b (ENSHBUG00000002700)	tpt1 (ENSHBUG00000002705)	RANBP2 (ENSHBUG00000000053)	ENSHBUG00000002751	tmem223 (ENSHBUG00000002760)	ENSHBUG00000002767	SLC5A7 (ENSHBUG00000002791)	CLDN14 (ENSHBUG00000002799)	ENSHBUG00000002842	arl6 (ENSHBUG00000002834)	EPHA6 (ENSHBUG00000002924)
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a.b	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a.a.a	ENSGT00950000183023.A.f.a.a.a.f.a.a	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.b	ENSGT00950000183023.A.f.a.a.a.e.a	ENSGT00950000183023.A.f.a.a.a.f.b.a	ENSGT00950000183023.A.f.a.a.a.f.a.b	ENSGT00950000183023.A.f.a.a.a.f.b.b	ENSGT00950000183023.A.f.a.a.a.e.b	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183048.b.b.b.c.a.a.a.a.b	ENSGT00950000183048.b.b.b.c.a.a.a.a.a	ENSGT00950000183048.b.b.b.c.a.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT01030000235834	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000168128	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
P. nyererei	MODERN SPECIES	501					ENSPNYG00000015598	ENSPNYG00000015620	ENSPNYG00000015646	ENSPNYG00000015662	ENSPNYG00000015693	ENSPNYG00000015703	ENSPNYG00000015722	ENSPNYG00000015738	ENSPNYG00000015757	ENSPNYG00000015785	fzd7b (ENSPNYG00000015800)	ENSPNYG00000015814 #22	SERP2 (ENSPNYG00000015883)	tsc22d1 (ENSPNYG00000015900)	kctd4 (ENSPNYG00000015915)	gtf2f2b (ENSPNYG00000015925)	tpt1 (ENSPNYG00000015940)	RANBP2 (ENSPNYG00000015971)	ENSPNYG00000016043	ENSPNYG00000016087	GCC2 (ENSPNYG00000016102)	tmem223 (ENSPNYG00000016145)	SLC5A7 (ENSPNYG00000016162)	CLDN14 (ENSPNYG00000016186)	ENSPNYG00000016219	arl6 (ENSPNYG00000016273)	EPHA6 (ENSPNYG00000016304)
Haplochromini_B	ANCESTRAL SPECIES	17				ENSGT00950000183023.A.f.a.b.a.a.a.p.b.b.c.b.b	ENSGT00950000183023.A.f.a.a.a.f.b.a	ENSGT00950000183023.A.f.a.a.a.f.a.b	ENSGT00950000183023.A.f.a.a.a.f.b.b	ENSGT00950000183023.A.f.a.a.a.e.b	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183048.b.b.b.c.a.a.a.a.b	ENSGT00950000183048.b.b.b.c.a.a.b.a	ENSGT00950000183048.b.b.b.c.b.a.a.b.c	ENSGT00950000183048.b.b.b.c.a.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT01030000235834	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l
Eastern happy	MODERN SPECIES	7	ENSACLG00000020828	ENSACLG00000020821	ENSACLG00000020811	ENSACLG00000020802	ENSACLG00000020796	ENSACLG00000020785	ENSACLG00000020777	ENSACLG00000020766	ENSACLG00000020756	ENSACLG00000020752	ENSACLG00000020739	ENSACLG00000020728	ENSACLG00000020716	ENSACLG00000020701	fzd7b (ENSACLG00000020689)	ENSACLG00000020681 #22	ENSACLG00000020676	SERP2 (ENSACLG00000020650)	ENSACLG00000020641	tsc22d1 (ENSACLG00000020634)	kctd4 (ENSACLG00000020628)	gtf2f2b (ENSACLG00000020594)	tpt1 (ENSACLG00000020580)	RANBP2 (ENSACLG00000020500)	ENSACLG00000020484	lims1 (ENSACLG00000020405)	tmem223 (ENSACLG00000020378)	GCC2 (ENSACLG00000020322)	SLC5A7 (ENSACLG00000020298)	CLDN14 (ENSACLG00000020282)	ENSACLG00000020263
Zebra mbuna	MODERN SPECIES	1098	ENSMZEG00005012128	ENSMZEG00005012119	ENSMZEG00005012108	ENSMZEG00005012099	ENSMZEG00005012091	ENSMZEG00005012077	ENSMZEG00005012067	ENSMZEG00005012059	ENSMZEG00005012053	ENSMZEG00005012052	ENSMZEG00005012048	ENSMZEG00005012036	ENSMZEG00005012031	ENSMZEG00005012017	fzd7b (ENSMZEG00005012012)	ALS2 (ENSMZEG00005011151) #22	SERP2 (ENSMZEG00005011044)	ENSMZEG00005011030	tsc22d1 (ENSMZEG00005011022)	kctd4 (ENSMZEG00005011017)	gtf2f2b (ENSMZEG00005011007)	tpt1 (ENSMZEG00005010996)	RANBP2 (ENSMZEG00005010956)	ENSMZEG00005010940	ENSMZEG00005010880	tmem223 (ENSMZEG00005010851)	ENSMZEG00005010809	SLC5A7 (ENSMZEG00005010791)	CLDN14 (ENSMZEG00005010785)	ENSMZEG00005010778	arl6 (ENSMZEG00005010769)
Nile tilapia	MODERN SPECIES	7	ENSONIG00000030800	ENSONIG00000031624	ENSONIG00000031112	ENSONIG00000034853	ENSONIG00000033310	ENSONIG00000032400	ENSONIG00000029801	ENSONIG00000028876	ENSONIG00000040310	ENSONIG00000039892	ENSONIG00000029654	ENSONIG00000036914	ENSONIG00000036194	ENSONIG00000033122	fzd7b (ENSONIG00000021335)	ALS2 (ENSONIG00000004358) #22	SERP2 (ENSONIG00000028541)	ENSONIG00000030650	tsc22d1 (ENSONIG00000004357)	gtf2f2b (ENSONIG00000004353)	kctd4 (ENSONIG00000004355)	tpt1 (ENSONIG00000040164)	RANBP2 (ENSONIG00000004346)	ENSONIG00000004345	ENSONIG00000036841	GCC2 (ENSONIG00000004335)	tmem223 (ENSONIG00000042715)	SLC5A7 (ENSONIG00000032833)	CLDN14 (ENSONIG00000035598)	fbxo47 (ENSONIG00000004325)	arl6 (ENSONIG00000004329)
Midas cichlid	MODERN SPECIES	399														ENSACIG00000001799	fzd7b (ENSACIG00000001759)	ENSACIG00000001677 #22	SERP2 (ENSACIG00000001560)	zgc:65895 (ENSACIG00000001518)	tsc22d1 (ENSACIG00000001505)	kctd4 (ENSACIG00000001498)	gtf2f2b (ENSACIG00000001476)	tpt1 (ENSACIG00000001458)	RANBP2 (ENSACIG00000001203)	ENSACIG00000001167	tmem223 (ENSACIG00000001134)	GCC2 (ENSACIG00000001072)	SLC5A7 (ENSACIG00000001046)	CLDN14 (ENSACIG00000001020)	ENSACIG00000000963	arl6 (ENSACIG00000000945)	EPHA6 (ENSACIG00000000895)
Pomacentridae	ANCESTRAL SPECIES	17	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000168128	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l
Pomacentridae_A	ANCESTRAL SPECIES	14	ENSGT01050000244890.a.b.a.i.b	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.e.a	ENSGT00950000183048.b.b.b	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT01030000236979	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000168128	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237
Amphiprion	ANCESTRAL SPECIES	8	ENSGT00940000158887	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000159052	ENSGT01050000244857.B.b	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000183023.A.f.a.a.a.g	ENSGT00950000183023.A.f.a.a.a.h.b	ENSGT01030000234640.a.a.c.a.kb	ENSGT01030000234640.a.a.c.a.lb	ENSGT00950000183023.A.e.a	ENSGT00940000158239.a.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000162467.a.a	ENSGT00940000159144.A.e.b	ENSGT00940000159144.B	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT00940000154490.a.a
Orange clownfish	MODERN SPECIES	3	ENSAPEG00000011810	asic4a (ENSAPEG00000011839)	CHPF (ENSAPEG00000011882)	pdxka (ENSAPEG00000011906)	agpat3 (ENSAPEG00000011978)	ENSAPEG00000012003	ENSAPEG00000012020	ENSAPEG00000012079	ENSAPEG00000012110	ENSAPEG00000012126	ENSAPEG00000012161	ENSAPEG00000012181	ENSAPEG00000012190	ENSAPEG00000012219	fzd7b (ENSAPEG00000012268)	ALS2 (ENSAPEG00000012283) #22	SERP2 (ENSAPEG00000012407)	tsc22d1 (ENSAPEG00000012423)	gtf2f2b (ENSAPEG00000012444)	kctd4 (ENSAPEG00000012458)	tpt1 (ENSAPEG00000012472)	RANBP2 (ENSAPEG00000012495)	ENSAPEG00000012573	ENSAPEG00000012646	ENSAPEG00000012659	tmem223 (ENSAPEG00000012694)	ENSAPEG00000012715	SLC5A7 (ENSAPEG00000012734)	CLDN14 (ENSAPEG00000012754)	ENSAPEG00000012774	arl6 (ENSAPEG00000012838)
Clown anemonefish	MODERN SPECIES	2588										ENSAOCG00000009783	ENSAOCG00000009798	ENSAOCG00000000605	ENSAOCG00000009869	ENSAOCG00000009909	fzd7b (ENSAOCG00000009925)	ALS2 (ENSAOCG00000001990) #22
Spiny chromis	MODERN SPECIES	1257																ALS2 (ENSAPOG00000017512) #22	ENSAPOG00000017483	tsc22d1 (ENSAPOG00000017458)	gtf2f2b (ENSAPOG00000017423)	kctd4 (ENSAPOG00000017166)	tpt1 (ENSAPOG00000017154)	RANBP2 (ENSAPOG00000017146)	ENSAPOG00000017128	ENSAPOG00000017063	GCC2 (ENSAPOG00000017040)	tmem223 (ENSAPOG00000017024)	SLC5A7 (ENSAPOG00000017006)	CLDN14 (ENSAPOG00000016973)	ENSAPOG00000016960	arl6 (ENSAPOG00000016893)
Bicolor damselfish	MODERN SPECIES	327	TMBIM1 (ENSSPAG00000007061)	pnkd (ENSSPAG00000007083)	gmppaa (ENSSPAG00000007113)	ENSSPAG00000007186	asic4a (ENSSPAG00000007214)	CHPF (ENSSPAG00000007363)	pdxka (ENSSPAG00000007386)	agpat3 (ENSSPAG00000007464)	ENSSPAG00000007496	ENSSPAG00000007514	ENSSPAG00000007558	ENSSPAG00000007590	ENSSPAG00000007614	ENSSPAG00000007642	fzd7b (ENSSPAG00000007646)	ENSSPAG00000007653 #22	SERP2 (ENSSPAG00000007674)	ENSSPAG00000007686	tsc22d1 (ENSSPAG00000007688)	gtf2f2b (ENSSPAG00000007713)	kctd4 (ENSSPAG00000007959)	tpt1 (ENSSPAG00000007967)	RANBP2 (ENSSPAG00000008000)	ENSSPAG00000008102	ENSSPAG00000008200	tmem223 (ENSSPAG00000008217)
Tiger tail seahorse	MODERN SPECIES	313	pnkd (ENSHCOG00000018894)	gmppaa (ENSHCOG00000018883)	ENSHCOG00000018849	ENSHCOG00000018842	asic4a (ENSHCOG00000018829)	CHPF (ENSHCOG00000018799)	pdxka (ENSHCOG00000018782)	agpat3 (ENSHCOG00000018746)	ENSHCOG00000018719	ENSHCOG00000018675	ENSHCOG00000018666	ENSHCOG00000018646	ENSHCOG00000018634	ENSHCOG00000018620	fzd7b (ENSHCOG00000018538)	ALS2 (ENSHCOG00000018508) #22	MRAS (ENSHCOG00000018456)	tmem177 (ENSHCOG00000018441)	ptpn4a (ENSHCOG00000018430)	epb41l5 (ENSHCOG00000018374)	nrp2b (ENSHCOG00000018329)	ENSHCOG00000018273	ENSHCOG00000018260	glb1l (ENSHCOG00000018244)	ANKZF1 (ENSHCOG00000018225)	igf2bp2a (ENSHCOG00000018090)	tmem41aa (ENSHCOG00000018036)	ehhadh (ENSHCOG00000018012)	zgc:162707 (ENSHCOG00000017988)	nme9 (ENSHCOG00000017975)	ENSHCOG00000017928
Pinecone sodierfish	MODERN SPECIES	13	ENSMMDG00005004783	ENSMMDG00005004777	ENSMMDG00005004772	itgav (ENSMMDG00005003902)	si:dkey-69o16.5 (ENSMMDG00005003807)	ENSMMDG00005003793	LMLN (ENSMMDG00005003775)	ENSMMDG00005003767	ENSMMDG00005003760	ENSMMDG00005003759	ENSMMDG00005003751	ENSMMDG00005003746	ENSMMDG00005003740	ENSMMDG00005003729	FZD7 (ENSMMDG00005003709)	ALS2 (ENSMMDG00005003688) #22	MPP4 (ENSMMDG00005003666) #23	ENSMMDG00005003658	ENSMMDG00005003655	ENSMMDG00005003651	ENSMMDG00005003647	tmem237a (ENSMMDG00005003642) #24	ABI2 (ENSMMDG00005003634)	ENSMMDG00005003630	ENSMMDG00005003627	ENSMMDG00005003623	ENSMMDG00005003621	ENSMMDG00005003619	ENSMMDG00005003616	ENSMMDG00005003609	ENSMMDG00005003606
Protacanthopterygii	ANCESTRAL SPECIES	99	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a	ENSGT00950000182895.a.b.u.b	ENSGT00940000158193	ENSGT00510000047718.d	ENSGT00980000199010	ENSGT00940000156449.a	ENSGT00950000183046.a.a.fb	ENSGT00390000013916	ENSGT00940000158239.a.b.f	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156089.f	ENSGT00940000156552.c.a	ENSGT00530000063873.B	ENSGT00940000159069	ENSGT00940000156160.b.b	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000166348	ENSGT00940000155126.s.b	ENSGT00430000031142	ENSGT00940000160059.a.b.b	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00940000166954
Salmoninae	ANCESTRAL SPECIES	304	ENSGT00940000157516	ENSGT00940000163412.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00950000182895.a.b.u.b	ENSGT00940000158193	ENSGT00510000047718.d	ENSGT00940000156449.a.c	ENSGT00950000183046.a.a.fb	ENSGT00390000013916	ENSGT00940000154319.f	ENSGT00940000158239.a.b.f	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156552.c.a.f
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000157516	ENSGT00940000163412.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a.n	ENSGT00950000182895.a.b.u.b	ENSGT00940000158193	ENSGT00510000047718.d	ENSGT00940000156449.a.c.b	ENSGT00950000183046.a.a.fb	ENSGT00390000013916	ENSGT00940000154319.f	ENSGT00940000158239.a.b.f	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156552.c.a.f	ENSGT00940000178309.b	ENSGT00530000063873.B.h	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000155126.s.b	ENSGT00430000031142	ENSGT00940000160059.a.b.b.b	ENSGT00940000166348	ENSGT00940000160059.a.b.b.a	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00940000166954.a	ENSGT00940000154095.b.b.a.b.d
Oncorhynchus	ANCESTRAL SPECIES	13	ENSGT00940000158179.a	ENSGT00390000010672	ENSGT00390000006618	ENSGT00940000157516.h	ENSGT00940000163412.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000158193	ENSGT00510000047718.d	ENSGT00950000183046.a.a.fb	ENSGT00390000013916	ENSGT00940000154319.f	ENSGT00940000158239.a.b.f	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156552.c.a.f	ENSGT00530000063873.B.h	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000155126.s.b	ENSGT00430000031142	ENSGT00940000160059.a.b.b.b	ENSGT00950000183165.b.a.e.b.d.a.b.a.a	ENSGT00940000166954.a	ENSGT00940000154095.b.b.a.b.d	ENSGT00940000155522.g.a.l	ENSGT00390000016940.c.b.a.c	ENSGT00950000182882.A.b.b.e.d
Oncorhynchus_a	ANCESTRAL SPECIES	11											ENSGT00940000158193	ENSGT00510000047718.d	ENSGT00390000013916	ENSGT00940000154319.f	ENSGT00940000158239.a.b.f	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156552.c.a.f	ENSGT00530000063873.B.h	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000155126.s.b	ENSGT00430000031142	ENSGT00940000160059.a.b.b.b	ENSGT00950000183165.b.a.e.b.d.a.b.b	ENSGT00950000183165.b.a.e.b.d.a.b.a.a	ENSGT00940000166954.a	ENSGT00940000154095.b.b.a.b.d	ENSGT00940000155522.g.a.l	ENSGT00390000016940.c.b.a.c
Coho salmon	MODERN SPECIES	18	ENSOKIG00005044414	ENSOKIG00005044402	glb1l (ENSOKIG00005042882)	ENSOKIG00005042720	ENSOKIG00005041828	sumo3b (ENSOKIG00005041723)	ube2g2 (ENSOKIG00005041702)	TSPEAR (ENSOKIG00005041677)	ENSOKIG00005041664	bmpr2b (ENSOKIG00005041479)	ENSOKIG00005041440	ENSOKIG00005041403	SUMO1 (ENSOKIG00005041379)	ENSOKIG00005041343	fzd7a (ENSOKIG00005041315)	ALS2 (ENSOKIG00005040413) #22	MPP4 (ENSOKIG00005040094) #23	tmem237a (ENSOKIG00005040010) #24	RAPH1 (ENSOKIG00005039928)	ENSOKIG00005039897	FER1L6 (ENSOKIG00005039679)	prkag3b (ENSOKIG00005039500)	ENSOKIG00005039472	ENSOKIG00005039446	NRP2 (ENSOKIG00005038900)	ENSOKIG00005038873	ENSOKIG00005038858	ENSOKIG00005038825	ENSOKIG00005038816	ENSOKIG00005038799	fn1a (ENSOKIG00005038414)
Chinook salmon	MODERN SPECIES	9	ENSOTSG00005004093	ENSOTSG00005004095	CCNK (ENSOTSG00005004097)	papola (ENSOTSG00005004407)	ACTA1 (ENSOTSG00005011710)	ENSOTSG00005011711	SCG5 (ENSOTSG00005011713)	ENSOTSG00005011716	katnbl1 (ENSOTSG00005011719)	SLC5A7 (ENSOTSG00005011723)	THBS1 (ENSOTSG00005011741)	gpr176 (ENSOTSG00005016370)	pigh (ENSOTSG00005016374)	rhov (ENSOTSG00005016376)	vps18 (ENSOTSG00005016397)	ENSOTSG00005018134 #22	TGFB3 (ENSOTSG00005018146)	atraid (ENSOTSG00005018148)	snx17 (ENSOTSG00005018160)	znf513a (ENSOTSG00005019348)	ENSOTSG00005019351	ENSOTSG00005019353	FNDC4 (ENSOTSG00005019354)	sox7 (ENSOTSG00005019355)	rida (ENSOTSG00005019356)	ENSOTSG00005019358	agbl5 (ENSOTSG00005017859)	ENSOTSG00005017862	tfap2d (ENSOTSG00005017867)	ENSOTSG00005017870	ENSOTSG00005017874
Rainbow trout	MODERN SPECIES	14	SUMO3 (ENSOMYG00000037253)	ENSOMYG00000058894	TSPEAR (ENSOMYG00000037235)	ENSOMYG00000074538	bmpr2b (ENSOMYG00000049256)	ENSOMYG00000063219	ENSOMYG00000073277	fam117bb (ENSOMYG00000056573)	ENSOMYG00000049726	ENSOMYG00000076869	ENSOMYG00000056834	ENSOMYG00000056170	ENSOMYG00000058730	sumo-1 (ENSOMYG00000025363)	fzd7a (ENSOMYG00000026160)	ALS2 (ENSOMYG00000070422) #22	ENSOMYG00000049289	ENSOMYG00000048007	MPP4 (ENSOMYG00000037216) #23	ENSOMYG00000037209	tmem237a (ENSOMYG00000057264) #24	ENSOMYG00000054664	ENSOMYG00000074658	cd28 (ENSOMYG00000037183)	ENSOMYG00000073741	ENSOMYG00000064801	ENSOMYG00000049740	ENSOMYG00000053842	ENSOMYG00000051588	ENSOMYG00000068788	ENSOMYG00000063749
Salmo	ANCESTRAL SPECIES	10	ENSGT00940000157516	ENSGT00940000163412.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a.n	ENSGT00950000182895.a.b.u.b	ENSGT00940000158193	ENSGT00510000047718.d	ENSGT00940000156449.a.c.b	ENSGT00950000183046.a.a.fb	ENSGT00390000013916	ENSGT00940000154319.f	ENSGT00940000158239.a.b.f	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156552.c.a.f	ENSGT00530000063873.B.h	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000155126.s.b	ENSGT00430000031142	ENSGT00940000160059.a.b.b.b	ENSGT00940000166954.a	ENSGT00940000154095.b.b.a.b.d	ENSGT00940000155522.g.a.l	ENSGT00390000016940.c.b.a.c	ENSGT00950000182882.A.b.b.e.d	ENSGT00940000164444.a.e
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	13	ENSSSAG00000052812	glb1l (ENSSSAG00000051577)	ENSSSAG00000098086	ENSSSAG00000021713	ENSSSAG00000050303	ENSSSAG00000064688	ENSSSAG00000002802	ENSSSAG00000120441	SUMO3 (ENSSSAG00000084800)	ube2g2 (ENSSSAG00000051507)	TSPEAR (ENSSSAG00000050067)	ENSSSAG00000105259	ENSSSAG00000117001	ENSSSAG00000050202	ENSSSAG00000050171	ENSSSAG00000050144 #22	ENSSSAG00000088870	ENSSSAG00000096274	ENSSSAG00000049766	ENSSSAG00000091966	ENSSSAG00000080914	ENSSSAG00000080894	ENSSSAG00000092198	ENSSSAG00000114673	ENSSSAG00000105675	ENSSSAG00000009945	ENSSSAG00000089367	ENSSSAG00000080872	ENSSSAG00000080865	ENSSSAG00000116935	ENSSSAG00000080855
Atlantic salmon	MODERN SPECIES	653																ENSSSAG00000119930 #22	ENSSSAG00000055633 #23
River trout	MODERN SPECIES	12	ENSSTUG00000025599	ENSSTUG00000025607	glb1l (ENSSTUG00000025743)	ENSSTUG00000029245	ENSSTUG00000031323	ube2g2 (ENSSTUG00000031336)	TSPEAR (ENSSTUG00000031340)	ENSSTUG00000031374	bmpr2b (ENSSTUG00000031391)	ENSSTUG00000017786	fam117bb (ENSSTUG00000017805)	ENSSTUG00000017818	ENSSTUG00000017831	SUMO1 (ENSSTUG00000017856)	fzd7a (ENSSTUG00000017867)	ALS2 (ENSSTUG00000017918) #22	ENSSTUG00000019024	MPP4 (ENSSTUG00000019030) #23	ENSSTUG00000019043	tmem237a (ENSSTUG00000019047) #24	RAPH1 (ENSSTUG00000019063)	ENSSTUG00000019081	ENSSTUG00000019087	FER1L6 (ENSSTUG00000019137)	ENSSTUG00000020217	prkag3b (ENSSTUG00000020228)	ENSSTUG00000020249	ENSSTUG00000020254	fn1a (ENSSTUG00000020383)	ENSSTUG00000022478	mnx2a (ENSSTUG00000022555)
Huchen	DUPLICATION
Huchen	MODERN SPECIES	5143															CRK (ENSHHUG00000017848)	ENSHHUG00000051979 #22
Huchen	MODERN SPECIES	4408																ENSHHUG00000043651 #22	GRIN2A (ENSHHUG00000043535)
Northern pike	MODERN SPECIES	19	glb1l (ENSELUG00000010822)	ENSELUG00000010966	ENSELUG00000011005	sumo3b (ENSELUG00000011027)	ube2g2 (ENSELUG00000011061)	TSPEAR (ENSELUG00000011087)	ENSELUG00000034671	bmpr2b (ENSELUG00000000389)	fam117bb (ENSELUG00000011120)	ENSELUG00000011133	ENSELUG00000033217	ENSELUG00000029802	fzd7a (ENSELUG00000011210)	ENSELUG00000011231	ENSELUG00000011283	ALS2 (ENSELUG00000011306) #22	ENSELUG00000026273	ENSELUG00000027269	ENSELUG00000011387	ENSELUG00000011343 #23	tmem237a (ENSELUG00000011359) #24	ABI2 (ENSELUG00000011377)	ENSELUG00000029145	ENSELUG00000028952	RAPH1 (ENSELUG00000011416)	ENSELUG00000011439	FER1L6 (ENSELUG00000011484)	ABCB6 (ENSELUG00000000885)	ENSELUG00000011554	prkag3b (ENSELUG00000011611)	ENSELUG00000026569
Otomorpha	ANCESTRAL SPECIES	24	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a	ENSGT00950000182895.a.b.v	ENSGT00510000047718.d	ENSGT00980000199010	ENSGT00940000164964.b	ENSGT00940000156449.a	ENSGT00950000183046.a.a.fb	ENSGT00390000013916	ENSGT00940000158239.a.b	ENSGT00940000158239.a.a.c	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156089.f	ENSGT00940000156552.c.a	ENSGT00530000063873.B	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00530000068353	ENSGT00940000156160.b.b	ENSGT00940000155270.i.a	ENSGT00950000183214.a.b.a.b.f.a	ENSGT01030000235117	ENSGT00940000161508.a	ENSGT00940000168433
Otophysi	ANCESTRAL SPECIES	203											ENSGT00940000164964.b	ENSGT00940000156449.a	ENSGT00950000183046.a.a.fb	ENSGT00390000013916	ENSGT00940000158239.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156089.f	ENSGT00940000156552.c.a	ENSGT00530000063873.B	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00530000068353	ENSGT00940000156160.b.b	ENSGT00940000155270.i.a	ENSGT00950000183214.a.b.a.b.f.a	ENSGT01030000235117	ENSGT01030000234567.B.a.a.b.a.b	ENSGT00940000161508.a
Characiphysae	ANCESTRAL SPECIES	3	ENSGT00950000183074.C	ENSGT00940000160811.c.b	ENSGT00580000081600.c.b	ENSGT00390000011294	ENSGT00680000100037	ENSGT00940000154657.B	ENSGT00940000154657.A.c	ENSGT00940000155065	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00940000156449.a	ENSGT00950000183046.a.a.fb	ENSGT00390000013916	ENSGT00940000158239.a.b	ENSGT00940000158239.a.a.c	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156089.f	ENSGT00940000156552.c.a	ENSGT00530000063873.B	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00530000068353	ENSGT00940000156160.b.b	ENSGT00940000155270.i.a	ENSGT00950000183214.a.b.a.b.f.a	ENSGT01030000235117	ENSGT00940000161508.a	ENSGT00940000155126.s.b
Characiphysae_b	ANCESTRAL SPECIES	11	ENSGT00950000183074.C	ENSGT00940000160811.c.b	ENSGT00580000081600.c.b	ENSGT00390000011294	ENSGT00680000100037	ENSGT00940000154657.B	ENSGT00940000154657.A.c	ENSGT00940000155065	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00940000156449.a	ENSGT00950000183046.a.a.fb	ENSGT00390000013916	ENSGT00940000158239.a.b	ENSGT00940000158239.a.a.c	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156089.f	ENSGT00940000156552.c.a	ENSGT00530000063873.B	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00530000068353	ENSGT00940000156160.b.b	ENSGT00940000155270.i.a	ENSGT00950000183214.a.b.a.b.f.a	ENSGT01030000235117	ENSGT00940000161508.a	ENSGT00940000155126.s.b
Characoidei	ANCESTRAL SPECIES	1	ENSGT00940000156913.b.j.b	ENSGT00950000183074.C	ENSGT00940000160811.c.b	ENSGT00580000081600.c.b	ENSGT00390000011294	ENSGT00680000100037	ENSGT00940000154657.B	ENSGT00940000154657.A.c	ENSGT00940000155065	ENSGT00390000005949	ENSGT01100000263518.A.a.b	ENSGT00940000156449.a	ENSGT00950000183046.a.a.fb	ENSGT00390000013916	ENSGT00940000158239.a.a.c	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156089.f	ENSGT00940000156552.c.a	ENSGT00530000063873.B	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00530000068353	ENSGT00940000156160.b.b	ENSGT00940000155270.i.a	ENSGT00950000183214.a.b.a.b.f.a	ENSGT01030000235117	ENSGT00940000161508.a	ENSGT00940000155126.s.b
Red-bellied piranha	MODERN SPECIES	19																ALS2 (ENSPNAG00000010684) #22	MPP4 (ENSPNAG00000010716) #23	tmem237a (ENSPNAG00000010819) #24	abi2a (ENSPNAG00000010929)	ENSPNAG00000010959	RAPH1 (ENSPNAG00000011070)	ENSPNAG00000001516	FER1L6 (ENSPNAG00000001564)	prkag3b (ENSPNAG00000001576)	ENSPNAG00000011221	ABCB6 (ENSPNAG00000011251)	nrp2b (ENSPNAG00000001661)	ENSPNAG00000011310	PARD3B (ENSPNAG00000011335)	ENSPNAG00000011342	ENSPNAG00000001704
Mexicana tetra	MODERN SPECIES	10	ccdc93 (ENSAMXG00000024268)	ddx18 (ENSAMXG00000024269)	ENSAMXG00000037342	ENSAMXG00000033643	ENSAMXG00000041658	ENSAMXG00000024272	ENSAMXG00000024284	actr3 (ENSAMXG00000024286)	SLC35F5 (ENSAMXG00000024287)	gpr39 (ENSAMXG00000036048)	bmpr2b (ENSAMXG00000024291)	fam117bb (ENSAMXG00000024297)	CARF (ENSAMXG00000024302)	ENSAMXG00000043514	FZD7 (ENSAMXG00000024305)	ALS2 (ENSAMXG00000001685) #22	ENSAMXG00000001777	MPP4 (ENSAMXG00000002002) #23	tmem237a (ENSAMXG00000002221) #24	abi2a (ENSAMXG00000041989)	RAPH1 (ENSAMXG00000016673)	ENSAMXG00000043077	FER1L6 (ENSAMXG00000016740)	prkag3b (ENSAMXG00000016794)	ENSAMXG00000016816	ENSAMXG00000016833	ABCB6 (ENSAMXG00000016860)	nrp2b (ENSAMXG00000029255)	ENSAMXG00000005554	CPO (ENSAMXG00000005569)	fn1a (ENSAMXG00000005593)
Electric eel	MODERN SPECIES	176	gsk3ba (ENSEEEG00000019444)	nr1i2 (ENSEEEG00000019417)	CFAP91 (ENSEEEG00000019408)	zgc:113337 (ENSEEEG00000019407)	ENSEEEG00000019406	ENSEEEG00000019405	ENSEEEG00000019404	ENSEEEG00000019395	actr3 (ENSEEEG00000019121)	SLC35F5 (ENSEEEG00000019095)	gpr39 (ENSEEEG00000019087)	bmpr2b (ENSEEEG00000019083)	fam117bb (ENSEEEG00000019078)	ENSEEEG00000019076	fzd7a (ENSEEEG00000019075)	ALS2 (ENSEEEG00000019074) #22	abi2a (ENSEEEG00000019071)	RAPH1 (ENSEEEG00000019030)	ENSEEEG00000019026	FER1L6 (ENSEEEG00000019025)	ENSEEEG00000019024	prkag3b (ENSEEEG00000018996)	ENSEEEG00000018942
Channel catfish	MODERN SPECIES	25	ENSIPUG00000013085	c1ql2 (ENSIPUG00000013069)	ENSIPUG00000013048	en1 (ENSIPUG00000013029)	insig2 (ENSIPUG00000013001)	ccdc93 (ENSIPUG00000012974)	ddx18 (ENSIPUG00000012876)	ENSIPUG00000012829	ENSIPUG00000012623	actr3 (ENSIPUG00000012560)	slc35f5 (ENSIPUG00000012504)	gpr39 (ENSIPUG00000012486)	Bmpr2 (ENSIPUG00000012409)	fam117b (ENSIPUG00000012389)	fzd7a (ENSIPUG00000012373)	ALS2 (ENSIPUG00000012149) #22	tmem237a (ENSIPUG00000012105) #24	abi2a (ENSIPUG00000012006)	raph1 (ENSIPUG00000011891)	ENSIPUG00000011861	FER1L6 (ENSIPUG00000011610)	prkag3b (ENSIPUG00000011296)	ttll4 (ENSIPUG00000011178)	ENSIPUG00000011147	ENSIPUG00000011119	nrp2b (ENSIPUG00000011051)	ENSIPUG00000010916	fn1a (ENSIPUG00000010834)	ENSIPUG00000010818	cfap65 (ENSIPUG00000010768)	mnx2a (ENSIPUG00000010749)
Cyprinoidei	ANCESTRAL SPECIES	59	ENSGT00950000183009.db.b	ENSGT00510000047718.d	ENSGT00950000182895.a.b.v	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000181146	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000164964.b	ENSGT00940000156449.a	ENSGT00950000183046.a.a.fb	ENSGT00390000013916.g.b	ENSGT00940000158239.a.b	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156089.f	ENSGT00940000156552.c.a	ENSGT00530000063873.B	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00530000068353	ENSGT00940000156160.b.b	ENSGT00940000155270.i.a	ENSGT00950000183214.a.b.a.b.f.a.a	ENSGT00940000155126.s.b	ENSGT00940000166348	ENSGT00430000031142
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	232	ENSGT00940000163412.d	ENSGT00940000154913.bb.a	ENSGT00950000183009.db.b.d	ENSGT00510000047718.d.a	ENSGT00950000182895.a.b.v	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a.b	ENSGT00950000182942.a.b.g.a	ENSGT00390000005911.n	ENSGT00950000182942.a.b.h	ENSGT00940000154856.A.a.d.a	ENSGT00940000161051.a.a.a.a.a.b	ENSGT00940000156449.a.b	ENSGT00950000183046.a.a.fb.c.b	ENSGT00860000133854	ENSGT00940000155861.C.f.g #22	ENSGT00940000156444.d.d #23	ENSGT00940000156089.f.a	ENSGT00940000156552.c.a.b	ENSGT00940000174369	ENSGT00940000159069.h	ENSGT00950000183019.f.b.b.c.g	ENSGT00940000157916.e
Cyprininae_a	ANCESTRAL SPECIES	210	ENSGT00970000197261	ENSGT00950000183009.db.b.d	ENSGT00510000047718.d.a	ENSGT00950000182895.a.b.v	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a.b	ENSGT00950000182942.a.b.g.a.a	ENSGT00950000182942.a.b.g.a.b	ENSGT00390000005911.n	ENSGT00940000181146.a	ENSGT00940000154856.A.a.d.a	ENSGT00940000161051.a.a.a.a.a.b	ENSGT00940000156449.a.b	ENSGT00950000183046.a.a.fb.c.b	ENSGT00860000133854	ENSGT00940000155861.C.f.g #22	ENSGT00940000156444.d.d #23	ENSGT00940000156089.f.a	ENSGT00940000156552.c.a.b	ENSGT00940000174369	ENSGT00940000159069.h	ENSGT00950000183019.f.b.b.c.g	ENSGT00940000157916.e	ENSGT00940000155270.i.a.g	ENSGT00950000183214.a.b.a.b.f.a.a.b
Golden-line barbel	MODERN SPECIES	161	tmem41aa (ENSSGRG00000033261)	igf2bp2a (ENSSGRG00000033262)	ENSSGRG00000033265	tra2b (ENSSGRG00000033266)	TSPEAR (ENSSGRG00000033267)	ENSSGRG00000033274	ENSSGRG00000033279	ENSSGRG00000033341	ENSSGRG00000033344	glb1l (ENSSGRG00000033446)	ENSSGRG00000033447	ENSSGRG00000033449	ENSSGRG00000033455	ENSSGRG00000033621	bmpr2b (ENSSGRG00000033981)	ALS2 (ENSSGRG00000034030) #22	MPP4 (ENSSGRG00000034221) #23	abi2a (ENSSGRG00000034353)	RAPH1 (ENSSGRG00000035192)	ENSSGRG00000035275	ENSSGRG00000035280	prkag3b (ENSSGRG00000035315)	ENSSGRG00000035439	nrp2b (ENSSGRG00000035511)	ENSSGRG00000035513
Common carp reference	MODERN SPECIES	41	tmem41aa (ENSCCRG00000043770)	igf2bp2a (ENSCCRG00000082615)	tra2b (ENSCCRG00000005399)	ENSCCRG00000005385	ENSCCRG00000061289	ENSCCRG00000075178	ENSCCRG00000005685	glb1l (ENSCCRG00000007967)	ENSCCRG00000001290	ENSCCRG00000006883	ENSCCRG00000006872	ENSCCRG00000073722	bmpr2b (ENSCCRG00000017905)	fam117bb (ENSCCRG00000078665)	ENSCCRG00000073703	ENSCCRG00000029304 #22	ENSCCRG00000004189 #23	abi2a (ENSCCRG00000003969)	ENSCCRG00000004178	ENSCCRG00000072640	ENSCCRG00000005693	prkag3b (ENSCCRG00000059317)	ENSCCRG00000037457	ENSCCRG00000066621	ENSCCRG00000011725	ENSCCRG00000000774	ENSCCRG00000072723	ENSCCRG00000000795	tuba8l3 (ENSCCRG00000034603)	ENSCCRG00000076394	dnajb2 (ENSCCRG00000064837)
Goldfish	MODERN SPECIES	27	zgc:162707 (ENSCARG00000008624)	tmem41aa (ENSCARG00000008629)	igf2bp2a (ENSCARG00000008723)	ENSCARG00000010554	tra2b (ENSCARG00000010563)	TSPEAR (ENSCARG00000010578)	ENSCARG00000010617	ENSCARG00000010706	ENSCARG00000010914	ENSCARG00000010930	ENSCARG00000010940	bmpr2b (ENSCARG00000010952)	fam117bb (ENSCARG00000010989)	ENSCARG00000011004	fzd7a (ENSCARG00000011035)	ALS2 (ENSCARG00000011069) #22	ENSCARG00000011349	ENSCARG00000011365	abi2a (ENSCARG00000011394)	RAPH1 (ENSCARG00000011566)	ENSCARG00000012792	ENSCARG00000012833	ENSCARG00000013249	u2af1 (ENSCARG00000013256)	ENSCARG00000013282	cbsb (ENSCARG00000013385)	sik1 (ENSCARG00000016420)	ing1 (ENSCARG00000016479)	ankrd10b (ENSCARG00000016493)	naxd (ENSCARG00000016571)	rab20 (ENSCARG00000016654)
Cyprininae	ANCESTRAL SPECIES	122	ENSGT00940000154913.bb.b	ENSGT00950000183009.db.b.c	ENSGT00510000047718.d.b	ENSGT00940000168354.c	ENSGT00940000164909.e.a.a	ENSGT00950000182942.a.b.g.b	ENSGT00390000005911.m	ENSGT00940000181146	ENSGT00940000154856.A.a.d.b	ENSGT00940000161051.a.a.a.a.a.a	ENSGT00940000164964.b	ENSGT00940000156449.a.a	ENSGT00950000183046.a.a.fb.c.a	ENSGT00390000013916.g.b	ENSGT00940000158239.a.b	ENSGT00940000155861.C.f.h #22	ENSGT00940000156444.d.c #23	ENSGT00390000005159.i #24	ENSGT00940000156089.f.b	ENSGT00940000156552.c.a.a	ENSGT00530000063873.B	ENSGT00940000159069.g.b	ENSGT00950000183019.f.b.b.c.f.a	ENSGT00940000157916.f	ENSGT00940000156160.b.b	ENSGT00940000155270.i.a.h	ENSGT00950000183214.a.b.a.b.f.a.a.a.a	ENSGT00940000155126.s.b.a.b	ENSGT00940000166348.b	ENSGT00430000031142	ENSGT00940000160059.a.b.b.d
Cyprininae_a	ANCESTRAL SPECIES	95	ENSGT00940000154913.bb.b	ENSGT00950000183009.db.b.c	ENSGT00510000047718.d.b	ENSGT00940000168354.c	ENSGT00940000164909.e.a.a	ENSGT00950000182942.a.b.g.b	ENSGT00390000005911.m	ENSGT00940000181146.b	ENSGT00940000154856.A.a.d.b	ENSGT00940000161051.a.a.a.a.a.a	ENSGT00940000164964.b	ENSGT00940000156449.a.a	ENSGT00950000183046.a.a.fb.c.a	ENSGT00390000013916.g.b	ENSGT00940000158239.a.b	ENSGT00940000155861.C.f.h #22	ENSGT00940000156444.d.c #23	ENSGT00390000005159.i #24	ENSGT00940000156089.f.b	ENSGT00940000156552.c.a.a	ENSGT00530000063873.B	ENSGT00940000159069.g.b	ENSGT00950000183019.f.b.b.c.f.a	ENSGT00940000157916.f	ENSGT00940000156160.b.b	ENSGT00940000155270.i.a.h	ENSGT00950000183214.a.b.a.b.f.a.a.a.a	ENSGT00940000155126.s.b.a.b	ENSGT00940000166348.b	ENSGT00430000031142	ENSGT00940000160059.a.b.b.d
Common carp reference	MODERN SPECIES	46	igf2bp2a (ENSCCRG00000005568)	tra2b (ENSCCRG00000005547)	ENSCCRG00000005578	ENSCCRG00000058730	ENSCCRG00000028661	glb1l (ENSCCRG00000001579)	ENSCCRG00000008168	ENSCCRG00000008184	ENSCCRG00000008189	ENSCCRG00000008194	bmpr2b (ENSCCRG00000046124)	fam117bb (ENSCCRG00000057946)	ENSCCRG00000077193	ENSCCRG00000031158	fzd7a (ENSCCRG00000031157)	ALS2 (ENSCCRG00000044930) #22	MPP4 (ENSCCRG00000003914) #23	tmem237a (ENSCCRG00000003941) #24	abi2a (ENSCCRG00000066983)	ENSCCRG00000069803	ENSCCRG00000004252	prkag3b (ENSCCRG00000062058)	ENSCCRG00000027136	ENSCCRG00000077003	nrp2b (ENSCCRG00000077747)	ENSCCRG00000060738	fn1a (ENSCCRG00000000854)	ENSCCRG00000064495	ENSCCRG00000068659	mnx2a (ENSCCRG00000073003)	tuba8l5 (ENSCCRG00000060295)
Golden-line barbel	MODERN SPECIES	219	ENSSGRG00000054149	ENSSGRG00000054150	sumo3b (ENSSGRG00000054152)	pttg1ipb (ENSSGRG00000054202)	ENSSGRG00000054205	glb1l (ENSSGRG00000054217)	ANKZF1 (ENSSGRG00000054272)	ENSSGRG00000054273	ENSSGRG00000054279	ENSSGRG00000054302	ENSSGRG00000054316	bmpr2b (ENSSGRG00000054319)	fam117bb (ENSSGRG00000054324)	CARF (ENSSGRG00000054325)	fzd7a (ENSSGRG00000054326)	ALS2 (ENSSGRG00000054333) #22	ENSSGRG00000054343 #23	tmem237a (ENSSGRG00000054344) #24	abi2a (ENSSGRG00000054354)	RAPH1 (ENSSGRG00000054491)	ENSSGRG00000054496	ABCB6 (ENSSGRG00000054575)	nrp2b (ENSSGRG00000054601)	ENSSGRG00000000125
Goldfish	MODERN SPECIES	49	tra2b (ENSCARG00000055456)	TSPEAR (ENSCARG00000055474)	ENSCARG00000055496	ENSCARG00000055538	ENSCARG00000055613	glb1l (ENSCARG00000056680)	ANKZF1 (ENSCARG00000057804)	ENSCARG00000057849	ENSCARG00000057885	ENSCARG00000057935	ENSCARG00000057993	bmpr2b (ENSCARG00000058042)	fam117bb (ENSCARG00000058201)	CARF (ENSCARG00000058221)	fzd7a (ENSCARG00000058275)	ALS2 (ENSCARG00000058302) #22	MPP4 (ENSCARG00000058403) #23	tmem237a (ENSCARG00000058541) #24	abi2a (ENSCARG00000058606)	RAPH1 (ENSCARG00000059025)	ENSCARG00000059106	ENSCARG00000059288	prkag3b (ENSCARG00000060959)	ENSCARG00000061091	ABCB6 (ENSCARG00000061474)	nrp2b (ENSCARG00000063747)	ENSCARG00000064580	ENSCARG00000064592	fn1a (ENSCARG00000064711)	ENSCARG00000066428	mnx2a (ENSCARG00000066460)
Zebrafish	MODERN SPECIES	24	tra2b (ENSDARG00000002168)	TSPEAR (ENSDARG00000089235)	sumo3b (ENSDARG00000035993)	pttg1ipb (ENSDARG00000040039)	ENSDARG00000074143	ENSDARG00000041904	glb1l (ENSDARG00000029955)	ENSDARG00000095504	ENSDARG00000070011	ENSDARG00000058409	ENSDARG00000020834	bmpr2b (ENSDARG00000020057)	fam117bb (ENSDARG00000009839)	ENSDARG00000019950	fzd7a (ENSDARG00000060004)	ALS2 (ENSDARG00000075111) #22	MPP4 (ENSDARG00000058222) #23	tmem237a (ENSDARG00000041735) #24	abi2a (ENSDARG00000058207)	RAPH1 (ENSDARG00000006301)	ENSDARG00000095070	ENSDARG00000069978	ENSDARG00000078193	ENSDARG00000086317	FER1L6 (ENSDARG00000019316)	prkag3b (ENSDARG00000000369)	ENSDARG00000078935	ENSDARG00000095580	ABCB6 (ENSDARG00000074254)	ENSDARG00000113678	nrp2b (ENSDARG00000038446)
Clupeiformes	ANCESTRAL SPECIES	164					ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a	ENSGT00950000182895.a.b.v	ENSGT00510000047718.d	ENSGT00980000199010	ENSGT00940000156449.a	ENSGT00950000183046.a.a.fb	ENSGT00390000013916	ENSGT00940000158239.a.a.c	ENSGT00940000155861.C.f #22	ENSGT00940000156444.d #23	ENSGT00390000005159.i #24	ENSGT00940000156089.f	ENSGT00940000156552.c.a	ENSGT00940000174369	ENSGT00530000063873.B	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00940000155270.i.a	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000161508.a	ENSGT00940000155126.s.b	ENSGT00940000166348	ENSGT00430000031142
Denticle herring	MODERN SPECIES	19	ENSDCDG00000014763	ENSDCDG00000014757	ENSDCDG00000014690	ANKZF1 (ENSDCDG00000014662)	ENSDCDG00000014295	ENSDCDG00000012767	ENSDCDG00000012725	SUMO3 (ENSDCDG00000012626)	TSPEAR (ENSDCDG00000012600)	ENSDCDG00000012586	bmpr2b (ENSDCDG00000007782)	fam117bb (ENSDCDG00000007713)	ENSDCDG00000007700	SUMO1 (ENSDCDG00000007696)	FZD7 (ENSDCDG00000007689)	ALS2 (ENSDCDG00000007638) #22	MPP4 (ENSDCDG00000007623) #23	tmem237a (ENSDCDG00000007617) #24	abi2a (ENSDCDG00000007413)	RAPH1 (ENSDCDG00000005222)	ENSDCDG00000005185	ENSDCDG00000005183	FER1L6 (ENSDCDG00000005115)	prkag3b (ENSDCDG00000003970)	ENSDCDG00000003290	ENSDCDG00000003188	nrp2b (ENSDCDG00000005067)	nrp2b (ENSDCDG00000004952)	ENSDCDG00000004946	CPO (ENSDCDG00000004945)	fn1a (ENSDCDG00000004283)
Atlantic herring	MODERN SPECIES	11	ENSCHAG00000002493	abi2a (ENSCHAG00000001148)	ENSCHAG00000010577	fam117bb (ENSCHAG00000010558)	ENSCHAG00000010470	ENSCHAG00000010442	ENSCHAG00000009034	ENSCHAG00000008986	ENSCHAG00000008952	ENSCHAG00000008943	ENSCHAG00000008778	ENSCHAG00000008768	SUMO1 (ENSCHAG00000008715)	ENSCHAG00000008675	fzd7a (ENSCHAG00000008651)	ALS2 (ENSCHAG00000007686) #22	MPP4 (ENSCHAG00000007617) #23	ENSCHAG00000007592	ENSCHAG00000007531	ENSCHAG00000007517	ENSCHAG00000007489	tmem237a (ENSCHAG00000007436) #24	ENSCHAG00000007426	ENSCHAG00000007415	ENSCHAG00000007381	ENSCHAG00000007361	ENSCHAG00000007289	ENSCHAG00000007274	ENSCHAG00000007259	ENSCHAG00000007209	rnaseh2b (ENSCHAG00000007190)
Spotted gar	MODERN SPECIES	650	ENSLOCG00000010098	ENSLOCG00000010110	USP40 (ENSLOCG00000010114)	ENSLOCG00000010132	bmpr2a (ENSLOCG00000010166)	fam117bb (ENSLOCG00000010182)	ical1 (ENSLOCG00000010193)	wdr12 (ENSLOCG00000010208)	ENSLOCG00000010221	nop58 (ENSLOCG00000010225)	sumo1 (ENSLOCG00000010236)	ENSLOCG00000010244	ENSLOCG00000010254	fzd7a (ENSLOCG00000017840)	cdk15 (ENSLOCG00000010256) #21	ALS2 (ENSLOCG00000010268) #22	MPP4 (ENSLOCG00000010293) #23	tmem237b (ENSLOCG00000010304) #24	cyp20a1 (ENSLOCG00000010325)	abi2b (ENSLOCG00000010334)	ENSLOCG00000010347	raph1b (ENSLOCG00000010348)	ENSLOCG00000010370	CTLA4 (ENSLOCG00000010380)	ENSLOCG00000010389	mdh1b (ENSLOCG00000010397)	CNTNAP5 (ENSLOCG00000010405)	ENSLOCG00000010415	ENSLOCG00000010425	ENSLOCG00000017841	s100b (ENSLOCG00000010431)
Elephant shark	MODERN SPECIES	1501	ENSCMIG00000008947	ENSCMIG00000008945	ENSCMIG00000008940	ugt1b5 (ENSCMIG00000008939)	DIP2A (ENSCMIG00000007758)	ITGB2 (ENSCMIG00000006532)	ENSCMIG00000006243	TSPEAR (ENSCMIG00000006236)	ube2g2 (ENSCMIG00000006228)	pofut2 (ENSCMIG00000006150)	adarb1a (ENSCMIG00000006012)	ENSCMIG00000005993	sumo1 (ENSCMIG00000005980)	fzd7a (ENSCMIG00000005971)	cdk15 (ENSCMIG00000005961) #21	ALS2 (ENSCMIG00000005882) #22	ENSCMIG00000005827	MPP4 (ENSCMIG00000005794) #23	ENSCMIG00000005775	tmem237a (ENSCMIG00000005771) #24	cyp20a1 (ENSCMIG00000005758)	abi2b (ENSCMIG00000005732)	raph1b (ENSCMIG00000005688)	ADPRH (ENSCMIG00000005664)	ENSCMIG00000005661	ENSCMIG00000005654	trpm2 (ENSCMIG00000005586)	ENSCMIG00000005484	ENSCMIG00000005441	ENSCMIG00000005435	ENSCMIG00000005423
Lamprey	MODERN SPECIES	6																ENSPMAG00000007375 #22	ENSPMAG00000007366	ENSPMAG00000007364	ENSPMAG00000007325	nifk (ENSPMAG00000007316)	ENSPMAG00000007261	ENSPMAG00000007258	tfcp2l1 (ENSPMAG00000007229)	pdcd6ip (ENSPMAG00000007225)	ENSPMAG00000007211	ENSPMAG00000007184	pgap3 (ENSPMAG00000007161)	ENSPMAG00000007120	mettl2a (ENSPMAG00000007098)	cmbl (ENSPMAG00000007077)	phb (ENSPMAG00000007052)
Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000155861.A ##22
Lamprey	DUPLICATION
Lamprey	MODERN SPECIES	3943																ENSPMAG00000005074 ##22
Lamprey	MODERN SPECIES	1517								ENSPMAG00000001867	ENSPMAG00000001846	ENSPMAG00000001843	mrps25 (ENSPMAG00000001827)	ENSPMAG00000001822	ENSPMAG00000001820	KIF9 (ENSPMAG00000001803)	ENSPMAG00000001798	ENSPMAG00000001779 ##22	nrf1 (ENSPMAG00000001772)	slc35a2 (ENSPMAG00000001752)	pdss2 (ENSPMAG00000001740)	ENSPMAG00000001739
Huchen	MODERN SPECIES	11649																ENSHHUG00000017670 ##22
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000155861.B ##22
Lamprey	MODERN SPECIES	2829																ENSPMAG00000002661 ##22
Hagfish	MODERN SPECIES	113									ENSEBUG00000007177	ENSEBUG00000006059	ENSEBUG00000011853	ENSEBUG00000010294	ENSEBUG00000010659	ENSEBUG00000014846	RAPH1 (ENSEBUG00000012829)	ENSEBUG00000002826 ##22	jmjd4 (ENSEBUG00000014473)	ENSEBUG00000007512	ENSEBUG00000014339