Euteleostomi	ANCESTRAL SPECIES	429												ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a
Sarcopterygii	ANCESTRAL SPECIES	159				ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00390000008694.b.b	ENSGT00950000182859.A.a.a.b	ENSGT00940000154314	ENSGT00390000008225	ENSGT00940000157734	ENSGT00940000156208	ENSGT00940000161685.A.a	ENSGT00940000156716	ENSGT00390000005989.b	ENSGT00940000157556 #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00940000155874	ENSGT00530000063711.a ##15	ENSGT00940000179863	ENSGT00390000000134.b ##13	ENSGT00940000159875	ENSGT00940000156888	ENSGT00940000164380.a	ENSGT00940000156239
Tetrapoda	ANCESTRAL SPECIES	115				ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00960000187172	ENSGT00940000154314	ENSGT00390000008225	ENSGT00940000157734	ENSGT00940000156208	ENSGT00940000161685.A.a	ENSGT00940000156716	ENSGT00390000005989.b	ENSGT00940000157556 #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00940000155874	ENSGT00530000063711.a ##15	ENSGT00940000179863	ENSGT00390000000134.b ##13	ENSGT00940000159875	ENSGT00940000156888	ENSGT00390000003458	ENSGT00940000164380.a	ENSGT00940000156239	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00940000158064
Amniota	ANCESTRAL SPECIES	10	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00940000161036.B	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903
Mammalia	ANCESTRAL SPECIES	14	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT01000000220768	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00940000161036.B	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000115593	ENSGT00860000134673
Theria	ANCESTRAL SPECIES	21	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT01000000220768	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402
Eutheria	ANCESTRAL SPECIES	13	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Primates	ANCESTRAL SPECIES	16	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Bushbaby	MODERN SPECIES	136	MORN4 (ENSOGAG00000008789) #7	PI4K2A (ENSOGAG00000009957) #8	AVPI1 (ENSOGAG00000024961) #9	MARVELD1 (ENSOGAG00000024985) #10	ZFYVE27 (ENSOGAG00000033211) #11	SFRP5 (ENSOGAG00000017076) #12	GOLGA7B (ENSOGAG00000017079) #13	CRTAC1 (ENSOGAG00000014055) #14	R3HCC1L (ENSOGAG00000013152) #15	LOXL4 (ENSOGAG00000013165) #16	PYROXD2 (ENSOGAG00000013175) #17	HPS1 (ENSOGAG00000013179) #18	HPSE2 (ENSOGAG00000013186) #19	CNNM1 (ENSOGAG00000027397) #20	GOT1 (ENSOGAG00000005666) #21	NKX2-3 (ENSOGAG00000013370) #22	SLC25A28 (ENSOGAG00000005668) #23	ENTPD7 (ENSOGAG00000001579) #24	COX15 (ENSOGAG00000001582) #25	CUTC (ENSOGAG00000001584) #26	ABCC2 (ENSOGAG00000001587) #27	DNMBP (ENSOGAG00000001589) #28	CPN1 (ENSOGAG00000008493) #29	ERLIN1 (ENSOGAG00000026651) #30	CHUK (ENSOGAG00000013415) #31	CWF19L1 (ENSOGAG00000013425) #32	BLOC1S2 (ENSOGAG00000001395) #33	PKD2L1 (ENSOGAG00000013430) #34	SCD (ENSOGAG00000002486) #35	WNT8B (ENSOGAG00000029889) #36	SEC31B (ENSOGAG00000008885) #37
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Lemuriformes_a	ANCESTRAL SPECIES	21	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Greater bamboo lemur	MODERN SPECIES	968	PI4K2A (ENSPSMG00000009062) #8	AVPI1 (ENSPSMG00000009076) #9	MARVELD1 (ENSPSMG00000009082) #10	ZFYVE27 (ENSPSMG00000009295) #11	SFRP5 (ENSPSMG00000009435) #12	GOLGA7B (ENSPSMG00000009462) #13	CRTAC1 (ENSPSMG00000009508) #14	R3HCC1L (ENSPSMG00000009613) #15	LOXL4 (ENSPSMG00000009688) #16	PYROXD2 (ENSPSMG00000009714) #17	HPS1 (ENSPSMG00000009889) #18	HPSE2 (ENSPSMG00000010143) #19	ENSPSMG00000010211	CNNM1 (ENSPSMG00000010230) #20	GOT1 (ENSPSMG00000010275) #21	NKX2-3 (ENSPSMG00000010298) #22	SLC25A28 (ENSPSMG00000010302) #23	ENTPD7 (ENSPSMG00000010334) #24	COX15 (ENSPSMG00000010383) #25	CUTC (ENSPSMG00000010417) #26	ABCC2 (ENSPSMG00000010528) #27	DNMBP (ENSPSMG00000010675) #28	ENSPSMG00000010760	CPN1 (ENSPSMG00000010767) #29	ENSPSMG00000011438	ERLIN1 (ENSPSMG00000012426) #30	CHUK (ENSPSMG00000012497) #31	CWF19L1 (ENSPSMG00000012541) #32	ENSPSMG00000012584 #33	PKD2L1 (ENSPSMG00000012616) #34	SCD (ENSPSMG00000012620) #35
Coquerels sifaka	MODERN SPECIES	870									R3HCC1L (ENSPCOG00000025907) #15	LOXL4 (ENSPCOG00000015110) #16	PYROXD2 (ENSPCOG00000018342) #17	HPS1 (ENSPCOG00000017215) #18	HPSE2 (ENSPCOG00000022122) #19	CNNM1 (ENSPCOG00000028638) #20	GOT1 (ENSPCOG00000027796) #21	NKX2-3 (ENSPCOG00000018687) #22	SLC25A28 (ENSPCOG00000014616) #23	ENTPD7 (ENSPCOG00000018900) #24	COX15 (ENSPCOG00000013672) #25	CUTC (ENSPCOG00000002916) #26	ABCC2 (ENSPCOG00000025440) #27	DNMBP (ENSPCOG00000025825) #28	CPN1 (ENSPCOG00000020726) #29	ERLIN1 (ENSPCOG00000018487) #30	CHUK (ENSPCOG00000027527) #31	CWF19L1 (ENSPCOG00000019363) #32	BLOC1S2 (ENSPCOG00000024329) #33	PKD2L1 (ENSPCOG00000001148) #34	SCD (ENSPCOG00000026946) #35	WNT8B (ENSPCOG00000027043) #36	SEC31B (ENSPCOG00000023825) #37
Mouse lemur	MODERN SPECIES	6	C10orf62 (ENSMICG00000007711)	MORN4 (ENSMICG00000047547) #7	AVPI1 (ENSMICG00000030042) #9	ZFYVE27 (ENSMICG00000000197) #11	SFRP5 (ENSMICG00000044070) #12	GOLGA7B (ENSMICG00000000199) #13	CRTAC1 (ENSMICG00000000201) #14	R3HCC1L (ENSMICG00000000208) #15	LOXL4 (ENSMICG00000000209) #16	PYROXD2 (ENSMICG00000000210) #17	HPS1 (ENSMICG00000000212) #18	HPSE2 (ENSMICG00000000214) #19	ENSMICG00000034050	CNNM1 (ENSMICG00000010474) #20	GOT1 (ENSMICG00000010482) #21	NKX2-3 (ENSMICG00000002913) #22	SLC25A28 (ENSMICG00000010489) #23	ENTPD7 (ENSMICG00000010496) #24	COX15 (ENSMICG00000010505) #25	CUTC (ENSMICG00000042705) #26	ABCC2 (ENSMICG00000006689) #27	DNMBP (ENSMICG00000006721) #28	CPN1 (ENSMICG00000006739) #29	CYP2C23 (ENSMICG00000045388)	ERLIN1 (ENSMICG00000038590) #30	ENSMICG00000036445 #31	CWF19L1 (ENSMICG00000034162) #32	BLOC1S2 (ENSMICG00000046700) #33	PKD2L1 (ENSMICG00000015366) #34	SCD (ENSMICG00000044298) #35	WNT8B (ENSMICG00000001314) #36
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00910000147157	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00910000147157	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Gibbon	MODERN SPECIES	18	MORN4 (ENSNLEG00000014248) #7	PI4K2A (ENSNLEG00000014236) #8	AVPI1 (ENSNLEG00000014255) #9	ZFYVE27 (ENSNLEG00000014267) #11	SFRP5 (ENSNLEG00000014325) #12	GOLGA7B (ENSNLEG00000014326) #13	ENSNLEG00000035121	CRTAC1 (ENSNLEG00000014328) #14	R3HCC1L (ENSNLEG00000014364) #15	LOXL4 (ENSNLEG00000014379) #16	PYROXD2 (ENSNLEG00000014414) #17	HPS1 (ENSNLEG00000014448) #18	HPSE2 (ENSNLEG00000014531) #19	CNNM1 (ENSNLEG00000014538) #20	GOT1 (ENSNLEG00000014567) #21	NKX2-3 (ENSNLEG00000027207) #22	ENSNLEG00000029449 #23	ENTPD7 (ENSNLEG00000014604) #24	COX15 (ENSNLEG00000034626) #25	CUTC (ENSNLEG00000033562) #26	ABCC2 (ENSNLEG00000014650) #27	DNMBP (ENSNLEG00000014697) #28	CPN1 (ENSNLEG00000014719) #29	ERLIN1 (ENSNLEG00000014724) #30	CHUK (ENSNLEG00000014739) #31	CWF19L1 (ENSNLEG00000014744) #32	ENSNLEG00000033207	PKD2L1 (ENSNLEG00000014748) #34	SCD (ENSNLEG00000014754) #35	WNT8B (ENSNLEG00000014764) #36	SEC31B (ENSNLEG00000014765) #37
Hominidae	ANCESTRAL SPECIES	13	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00910000147157	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.j #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Orangutan	MODERN SPECIES	1	MORN4 (ENSPPYG00000031901) #7	PI4K2A (ENSPPYG00000002538) #8	AVPI1 (ENSPPYG00000002539) #9	MARVELD1 (ENSPPYG00000038510) #10	ZFYVE27 (ENSPPYG00000002540) #11	SFRP5 (ENSPPYG00000034062) #12	GOLGA7B (ENSPPYG00000002542) #13	CRTAC1 (ENSPPYG00000002543) #14	R3HCC1L (ENSPPYG00000002545) #15	LOXL4 (ENSPPYG00000002546) #16	PYROXD2 (ENSPPYG00000002547) #17	HPS1 (ENSPPYG00000002548) #18	HPSE2 (ENSPPYG00000002550) #19	CNNM1 (ENSPPYG00000002551) #20	GOT1 (ENSPPYG00000002552) #21	NKX2-3 (ENSPPYG00000002553) #22	SLC25A28 (ENSPPYG00000002554) #23	ENTPD7 (ENSPPYG00000002555) #24	COX15 (ENSPPYG00000002556) #25	CUTC (ENSPPYG00000002557) #26	ABCC2 (ENSPPYG00000002558) #27	DNMBP (ENSPPYG00000002559) #28	CPN1 (ENSPPYG00000029420) #29	ERLIN1 (ENSPPYG00000002560) #30	CHUK (ENSPPYG00000002562) #31	CWF19L1 (ENSPPYG00000002563) #32	BLOC1S2 (ENSPPYG00000033265) #33	PKD2L1 (ENSPPYG00000002565) #34	SCD (ENSPPYG00000002566) #35	WNT8B (ENSPPYG00000002568) #36	SEC31B (ENSPPYG00000002569) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00910000147157	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00910000147501	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.j #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Gorilla	MODERN SPECIES	1	ZFYVE27 (ENSGGOG00000024663) #11	SFRP5 (ENSGGOG00000012574) #12	GOLGA7B (ENSGGOG00000016005) #13	CRTAC1 (ENSGGOG00000016011) #14	ENSGGOG00000041605	R3HCC1L (ENSGGOG00000004792) #15	LOXL4 (ENSGGOG00000004798) #16	PYROXD2 (ENSGGOG00000002504) #17	ENSGGOG00000043397	HPS1 (ENSGGOG00000002508) #18	HPSE2 (ENSGGOG00000013772) #19	ENSGGOG00000037859	ENSGGOG00000043172	CNNM1 (ENSGGOG00000002546) #20	GOT1 (ENSGGOG00000002550) #21	NKX2-3 (ENSGGOG00000013605) #22	SLC25A28 (ENSGGOG00000000150) #23	ENTPD7 (ENSGGOG00000014030) #24	COX15 (ENSGGOG00000010577) #25	CUTC (ENSGGOG00000043674) #26	ABCC2 (ENSGGOG00000002275) #27	DNMBP (ENSGGOG00000016481) #28	CPN1 (ENSGGOG00000014771) #29	ERLIN1 (ENSGGOG00000010561) #30	ENSGGOG00000008996 #31	ENSGGOG00000005525	BLOC1S2 (ENSGGOG00000025362) #33	PKD2L1 (ENSGGOG00000001841) #34	SCD (ENSGGOG00000001098) #35	WNT8B (ENSGGOG00000014634) #36	SEC31B (ENSGGOG00000014643) #37
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00910000147157	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00910000147501	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.j #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Human	MODERN SPECIES	1	MORN4 (ENSG00000171160) #7	PI4K2A (ENSG00000155252) #8	AVPI1 (ENSG00000119986) #9	MARVELD1 (ENSG00000155254) #10	ZFYVE27 (ENSG00000155256) #11	SFRP5 (ENSG00000120057) #12	GOLGA7B (ENSG00000155265) #13	CRTAC1 (ENSG00000095713) #14	R3HCC1L (ENSG00000166024) #15	LOXL4 (ENSG00000138131) #16	PYROXD2 (ENSG00000119943) #17	HPS1 (ENSG00000107521) #18	HPSE2 (ENSG00000172987) #19	CNNM1 (ENSG00000119946) #20	GOT1 (ENSG00000120053) #21	NKX2-3 (ENSG00000119919) #22	SLC25A28 (ENSG00000155287) #23	ENTPD7 (ENSG00000198018) #24	CUTC (ENSG00000119929) #26	COX15 (ENSG00000014919) #25	ABCC2 (ENSG00000023839) #27	DNMBP (ENSG00000107554) #28	CPN1 (ENSG00000120054) #29	ERLIN1 (ENSG00000107566) #30	CHUK (ENSG00000213341) #31	CWF19L1 (ENSG00000095485) #32	BLOC1S2 (ENSG00000196072) #33	PKD2L1 (ENSG00000107593) #34	SCD (ENSG00000099194) #35	WNT8B (ENSG00000075290) #36	SEC31B (ENSG00000075826) #37
Pan	ANCESTRAL SPECIES	16	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00910000147157	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00910000147501	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000154714.v.e.a	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.j #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Chimpanzee	MODERN SPECIES	1	MARVELD1 (ENSPTRG00000051550) #10	ZFYVE27 (ENSPTRG00000002818) #11	SFRP5 (ENSPTRG00000045244) #12	GOLGA7B (ENSPTRG00000045507) #13	CRTAC1 (ENSPTRG00000002821) #14	ENSPTRG00000042728	R3HCC1L (ENSPTRG00000002822) #15	LOXL4 (ENSPTRG00000002823) #16	PYROXD2 (ENSPTRG00000002824) #17	ENSPTRG00000045214	HPS1 (ENSPTRG00000002825) #18	HPSE2 (ENSPTRG00000002826) #19	ENSPTRG00000050968	CNNM1 (ENSPTRG00000002828) #20	GOT1 (ENSPTRG00000002829) #21	NKX2-3 (ENSPTRG00000002830) #22	SLC25A28 (ENSPTRG00000002831) #23	ENTPD7 (ENSPTRG00000002832) #24	COX15 (ENSPTRG00000002835) #25	CUTC (ENSPTRG00000002836) #26	ABCC2 (ENSPTRG00000049872) #27	DNMBP (ENSPTRG00000049744) #28	CPN1 (ENSPTRG00000045585) #29	ERLIN1 (ENSPTRG00000002841) #30	CHUK (ENSPTRG00000033948) #31	CWF19L1 (ENSPTRG00000002843) #32	BLOC1S2 (ENSPTRG00000038697) #33	PKD2L1 (ENSPTRG00000002845) #34	SCD (ENSPTRG00000002847) #35	WNT8B (ENSPTRG00000002849) #36	SEC31B (ENSPTRG00000002850) #37
Bonobo	MODERN SPECIES	1	AVPI1 (ENSPPAG00000033222) #9	ZFYVE27 (ENSPPAG00000029291) #11	SFRP5 (ENSPPAG00000031585) #12	GOLGA7B (ENSPPAG00000040315) #13	CRTAC1 (ENSPPAG00000042754) #14	ENSPPAG00000031192	R3HCC1L (ENSPPAG00000039950) #15	LOXL4 (ENSPPAG00000030338) #16	PYROXD2 (ENSPPAG00000034734) #17	ENSPPAG00000037622	HPS1 (ENSPPAG00000033115) #18	HPSE2 (ENSPPAG00000030241) #19	ENSPPAG00000030090	CNNM1 (ENSPPAG00000024282) #20	GOT1 (ENSPPAG00000042571) #21	ENSPPAG00000035777 #22	SLC25A28 (ENSPPAG00000037976) #23	ENTPD7 (ENSPPAG00000035846) #24	COX15 (ENSPPAG00000002116) #25	CUTC (ENSPPAG00000033196) #26	ABCC2 (ENSPPAG00000040849) #27	DNMBP (ENSPPAG00000031406) #28	CPN1 (ENSPPAG00000043340) #29	ERLIN1 (ENSPPAG00000035564) #30	CHUK (ENSPPAG00000037851) #31	CWF19L1 (ENSPPAG00000031948) #32	BLOC1S2 (ENSPPAG00000043419) #33	PKD2L1 (ENSPPAG00000027774) #34	SCD (ENSPPAG00000029861) #35	WNT8B (ENSPPAG00000039871) #36	SEC31B (ENSPPAG00000035674) #37
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00910000147157	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.g #35	ENSGT00910000147853	ENSGT00940000160584 #36
Rhinopithecus	ANCESTRAL SPECIES	11	ENSGT00390000010434.b #8	ENSGT00730000111173 #7	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.g #35	ENSGT00910000147853	ENSGT00940000160584 #36
Black snub-nosed monkey	MODERN SPECIES	78	ANKRD2 (ENSRBIG00000039282)	PI4K2A (ENSRBIG00000037559) #8	MORN4 (ENSRBIG00000017424) #7	AVPI1 (ENSRBIG00000028956) #9	ZFYVE27 (ENSRBIG00000031505) #11	SFRP5 (ENSRBIG00000033947) #12	GOLGA7B (ENSRBIG00000035613) #13	CRTAC1 (ENSRBIG00000032795) #14	R3HCC1L (ENSRBIG00000031918) #15	LOXL4 (ENSRBIG00000029695) #16	PYROXD2 (ENSRBIG00000029292) #17	HPS1 (ENSRBIG00000036336) #18	HPSE2 (ENSRBIG00000038333) #19	CNNM1 (ENSRBIG00000003156) #20	GOT1 (ENSRBIG00000020502) #21	NKX2-3 (ENSRBIG00000038776) #22	SLC25A28 (ENSRBIG00000041178) #23	ENTPD7 (ENSRBIG00000036449) #24	COX15 (ENSRBIG00000038567) #25	CUTC (ENSRBIG00000006906) #26	ABCC2 (ENSRBIG00000036097) #27	DNMBP (ENSRBIG00000033786) #28	CPN1 (ENSRBIG00000043396) #29	ERLIN1 (ENSRBIG00000040949) #30	CHUK (ENSRBIG00000035878) #31	CWF19L1 (ENSRBIG00000033458) #32	BLOC1S2 (ENSRBIG00000039928) #33	PKD2L1 (ENSRBIG00000019139) #34	SCD (ENSRBIG00000036699) #35	ENSRBIG00000022602	WNT8B (ENSRBIG00000035421) #36
Golden snub-nosed monkey	MODERN SPECIES	3053														CNNM1 (ENSRROG00000041964) #20	GOT1 (ENSRROG00000045130) #21	NKX2-3 (ENSRROG00000031581) #22	SLC25A28 (ENSRROG00000029759) #23	ENTPD7 (ENSRROG00000038161) #24	COX15 (ENSRROG00000035980) #25	CUTC (ENSRROG00000039972) #26	ABCC2 (ENSRROG00000042002) #27	DNMBP (ENSRROG00000025406) #28	CPN1 (ENSRROG00000031375) #29	ERLIN1 (ENSRROG00000042519) #30	CHUK (ENSRROG00000042382) #31	CWF19L1 (ENSRROG00000043660) #32	BLOC1S2 (ENSRROG00000044178) #33	PKD2L1 (ENSRROG00000041606) #34	ENSRROG00000039965 #35	ENSRROG00000036106	WNT8B (ENSRROG00000034714) #36
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00910000147157	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.g #35	ENSGT00910000147853	ENSGT00940000160584 #36
Vervet Monkey	MODERN SPECIES	28	MORN4 (ENSCSAG00000005847) #7	PI4K2A (ENSCSAG00000005842) #8	AVPI1 (ENSCSAG00000005840) #9	MARVELD1 (ENSCSAG00000018448) #10	ZFYVE27 (ENSCSAG00000005827) #11	SFRP5 (ENSCSAG00000005821) #12	GOLGA7B (ENSCSAG00000005820) #13	CRTAC1 (ENSCSAG00000005817) #14	R3HCC1L (ENSCSAG00000005808) #15	LOXL4 (ENSCSAG00000005801) #16	PYROXD2 (ENSCSAG00000005790) #17	HPS1 (ENSCSAG00000005768) #18	ENSCSAG00000005727 #19	ENSCSAG00000005724 #20	GOT1 (ENSCSAG00000005721) #21	NKX2-3 (ENSCSAG00000005719) #22	SLC25A28 (ENSCSAG00000005717) #23	ENTPD7 (ENSCSAG00000005714) #24	COX15 (ENSCSAG00000005712) #25	CUTC (ENSCSAG00000005709) #26	ABCC2 (ENSCSAG00000005698) #27	DNMBP (ENSCSAG00000005674) #28	CPN1 (ENSCSAG00000005670) #29	ERLIN1 (ENSCSAG00000005667) #30	CHUK (ENSCSAG00000005664) #31	CWF19L1 (ENSCSAG00000005656) #32	ENSCSAG00000018449	BLOC1S2 (ENSCSAG00000005639) #33	PKD2L1 (ENSCSAG00000005629) #34	SCD (ENSCSAG00000005611) #35	WNT8B (ENSCSAG00000005607) #36
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00910000147157	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000.o.a #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.g #35	ENSGT00910000147853	ENSGT00940000160584 #36
Macaca	ANCESTRAL SPECIES	11	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00910000147157	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000.o.a #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.g #35	ENSGT00910000147853	ENSGT00940000160584 #36
Pig-tailed macaque	MODERN SPECIES	550	PI4K2A (ENSMNEG00000020019) #8	AVPI1 (ENSMNEG00000032294) #9	MARVELD1 (ENSMNEG00000009162) #10	ZFYVE27 (ENSMNEG00000039230) #11	SFRP5 (ENSMNEG00000043178) #12	GOLGA7B (ENSMNEG00000033947) #13	ENSMNEG00000001433	CRTAC1 (ENSMNEG00000035544) #14	R3HCC1L (ENSMNEG00000037890) #15	LOXL4 (ENSMNEG00000030985) #16	PYROXD2 (ENSMNEG00000040531) #17	HPS1 (ENSMNEG00000045397) #18	HPSE2 (ENSMNEG00000028562) #19	CNNM1 (ENSMNEG00000033068) #20	GOT1 (ENSMNEG00000030700) #21	NKX2-3 (ENSMNEG00000033053) #22	ENSMNEG00000033853	SLC25A28 (ENSMNEG00000027423) #23	ENTPD7 (ENSMNEG00000041235) #24	COX15 (ENSMNEG00000041146) #25	CUTC (ENSMNEG00000031615) #26	ABCC2 (ENSMNEG00000038501) #27	DNMBP (ENSMNEG00000039644) #28	CPN1 (ENSMNEG00000041677) #29	ERLIN1 (ENSMNEG00000041977) #30	CHUK (ENSMNEG00000030565) #31	ENSMNEG00000028051 #32	ENSMNEG00000037598	BLOC1S2 (ENSMNEG00000034276) #33	PKD2L1 (ENSMNEG00000030013) #34	ENSMNEG00000041175 #35
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00910000147157	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00980000200803	ENSGT00950000182937.A.a #31	ENSGT00940000156000.o.a #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.g #35	ENSGT00940000160584 #36
Rhesus	MODERN SPECIES	19	MARVELD1 (ENSMMUG00000064106) #10	ZFYVE27 (ENSMMUG00000015503) #11	SFRP5 (ENSMMUG00000064002) #12	CRTAC1 (ENSMMUG00000018154) #14	GOLGA7B (ENSMMUG00000056243) #13	ENSMMUG00000052648	R3HCC1L (ENSMMUG00000010281) #15	LOXL4 (ENSMMUG00000051439) #16	PYROXD2 (ENSMMUG00000020603) #17	HPS1 (ENSMMUG00000020604) #18	HPSE2 (ENSMMUG00000020605) #19	ENSMMUG00000059304	CNNM1 (ENSMMUG00000010357) #20	GOT1 (ENSMMUG00000010356) #21	ENSMMUG00000056041	NKX2-3 (ENSMMUG00000018270) #22	SLC25A28 (ENSMMUG00000023760) #23	ENTPD7 (ENSMMUG00000023761) #24	COX15 (ENSMMUG00000023762) #25	CUTC (ENSMMUG00000061918) #26	ABCC2 (ENSMMUG00000023764) #27	ENSMMUG00000030508	DNMBP (ENSMMUG00000023765) #28	CPN1 (ENSMMUG00000018755) #29	BLOC1S2 (ENSMMUG00000061808) #33	ERLIN1 (ENSMMUG00000018470) #30	ENSMMUG00000064203	CHUK (ENSMMUG00000018476) #31	CWF19L1 (ENSMMUG00000018472) #32	ENSMMUG00000010827	PKD2L1 (ENSMMUG00000010818) #34
Crab-eating macaque	MODERN SPECIES	19	MORN4 (ENSMFAG00000000472) #7	PI4K2A (ENSMFAG00000003191) #8	AVPI1 (ENSMFAG00000043548) #9	ZFYVE27 (ENSMFAG00000031815) #11	SFRP5 (ENSMFAG00000037089) #12	GOLGA7B (ENSMFAG00000002194) #13	CRTAC1 (ENSMFAG00000007568) #14	ENSMFAG00000060607	R3HCC1L (ENSMFAG00000036084) #15	LOXL4 (ENSMFAG00000036533) #16	PYROXD2 (ENSMFAG00000034078) #17	HPS1 (ENSMFAG00000036329) #18	HPSE2 (ENSMFAG00000036760) #19	ENSMFAG00000046376 #20	GOT1 (ENSMFAG00000030230) #21	NKX2-3 (ENSMFAG00000044388) #22	SLC25A28 (ENSMFAG00000003371) #23	ENTPD7 (ENSMFAG00000038377) #24	COX15 (ENSMFAG00000044256) #25	CUTC (ENSMFAG00000031857) #26	ABCC2 (ENSMFAG00000042907) #27	DNMBP (ENSMFAG00000002036) #28	CPN1 (ENSMFAG00000007369) #29	ENSMFAG00000041054 #33	ERLIN1 (ENSMFAG00000042046) #30	ENSMFAG00000062447	CHUK (ENSMFAG00000000426) #31	ENSMFAG00000031202 #32	PKD2L1 (ENSMFAG00000030987) #34	ENSMFAG00000040755 #35	WNT8B (ENSMFAG00000035598) #36
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000.o.a #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.g #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Olive baboon	MODERN SPECIES	2	MORN4 (ENSPANG00000021290) #7	PI4K2A (ENSPANG00000021292) #8	AVPI1 (ENSPANG00000021293) #9	MARVELD1 (ENSPANG00000021294) #10	ZFYVE27 (ENSPANG00000021295) #11	SFRP5 (ENSPANG00000021296) #12	GOLGA7B (ENSPANG00000021297) #13	CRTAC1 (ENSPANG00000021299) #14	R3HCC1L (ENSPANG00000021301) #15	LOXL4 (ENSPANG00000021302) #16	HPS1 (ENSPANG00000021281) #18	HPSE2 (ENSPANG00000021283) #19	CNNM1 (ENSPANG00000021286) #20	GOT1 (ENSPANG00000021288) #21	ENSPANG00000042572	NKX2-3 (ENSPANG00000021255) #22	SLC25A28 (ENSPANG00000033003) #23	ENTPD7 (ENSPANG00000021258) #24	COX15 (ENSPANG00000021260) #25	CUTC (ENSPANG00000021229) #26	ABCC2 (ENSPANG00000021230) #27	DNMBP (ENSPANG00000021232) #28	CPN1 (ENSPANG00000039263) #29	ERLIN1 (ENSPANG00000021228) #30	CHUK (ENSPANG00000021197) #31	ENSPANG00000021205 #32	BLOC1S2 (ENSPANG00000041274) #33	PKD2L1 (ENSPANG00000021208) #34	SCD (ENSPANG00000050775) #35	ENSPANG00000044002	ENSPANG00000047364
Cercopithecinae_d	ANCESTRAL SPECIES	57	ENSGT00390000010434.b #8	ENSGT00730000111173 #7	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.c #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000.o.a #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.g #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Sooty mangabey	MODERN SPECIES	598	MORN4 (ENSCATG00000037202) #7	AVPI1 (ENSCATG00000036178) #9	MARVELD1 (ENSCATG00000010571) #10	ZFYVE27 (ENSCATG00000039847) #11	SFRP5 (ENSCATG00000041752) #12	GOLGA7B (ENSCATG00000039684) #13	CRTAC1 (ENSCATG00000033100) #14	ENSCATG00000039731	R3HCC1L (ENSCATG00000034502) #15	LOXL4 (ENSCATG00000038999) #16	PYROXD2 (ENSCATG00000038164) #17	HPS1 (ENSCATG00000035195) #18	HPSE2 (ENSCATG00000035827) #19	CNNM1 (ENSCATG00000032684) #20	GOT1 (ENSCATG00000036970) #21	NKX2-3 (ENSCATG00000037715) #22	SLC25A28 (ENSCATG00000018619) #23	ENTPD7 (ENSCATG00000001677) #24	COX15 (ENSCATG00000043600) #25	CUTC (ENSCATG00000012209) #26	ABCC2 (ENSCATG00000028971) #27	DNMBP (ENSCATG00000030424) #28	CPN1 (ENSCATG00000040918) #29	ERLIN1 (ENSCATG00000034416) #30	CHUK (ENSCATG00000043885) #31	ENSCATG00000043079 #32	BLOC1S2 (ENSCATG00000033676) #33	PKD2L1 (ENSCATG00000037422) #34	ENSCATG00000034068 #35	WNT8B (ENSCATG00000037399) #36	SEC31B (ENSCATG00000025009) #37
Drill	MODERN SPECIES	660												ENSMLEG00000029234 #19	CNNM1 (ENSMLEG00000038123) #20	GOT1 (ENSMLEG00000028411) #21	ENSMLEG00000014598	NKX2-3 (ENSMLEG00000006314) #22	SLC25A28 (ENSMLEG00000034576) #23	ENTPD7 (ENSMLEG00000031087) #24	COX15 (ENSMLEG00000030859) #25	CUTC (ENSMLEG00000043325) #26	ABCC2 (ENSMLEG00000037629) #27	DNMBP (ENSMLEG00000043828) #28	CPN1 (ENSMLEG00000038257) #29	ERLIN1 (ENSMLEG00000029926) #30	CHUK (ENSMLEG00000035776) #31	CWF19L1 (ENSMLEG00000036355) #32	BLOC1S2 (ENSMLEG00000044004) #33	PKD2L1 (ENSMLEG00000033807) #34	ENSMLEG00000038669 #35	WNT8B (ENSMLEG00000032662) #36	SEC31B (ENSMLEG00000039004) #37
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.e #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Mas night monkey	MODERN SPECIES	658	AVPI1 (ENSANAG00000029881) #9	MARVELD1 (ENSANAG00000031120) #10	ZFYVE27 (ENSANAG00000038112) #11	SFRP5 (ENSANAG00000020345) #12	GOLGA7B (ENSANAG00000026383) #13	CRTAC1 (ENSANAG00000035892) #14	R3HCC1L (ENSANAG00000035504) #15	LOXL4 (ENSANAG00000028977) #16	PYROXD2 (ENSANAG00000023225) #17	HPS1 (ENSANAG00000033853) #18	HPSE2 (ENSANAG00000031117) #19	ENSANAG00000037434	ENSANAG00000003679	CNNM1 (ENSANAG00000021328) #20	GOT1 (ENSANAG00000000029) #21	NKX2-3 (ENSANAG00000021481) #22	SLC25A28 (ENSANAG00000032477) #23	ENTPD7 (ENSANAG00000033075) #24	COX15 (ENSANAG00000036238) #25	CUTC (ENSANAG00000027988) #26	ABCC2 (ENSANAG00000021520) #27	DNMBP (ENSANAG00000026014) #28	CPN1 (ENSANAG00000025971) #29	ERLIN1 (ENSANAG00000022217) #30	CHUK (ENSANAG00000038072) #31	CWF19L1 (ENSANAG00000023190) #32	BLOC1S2 (ENSANAG00000020045) #33	PKD2L1 (ENSANAG00000034186) #34	ENSANAG00000004992	ENSANAG00000015086 #35	WNT8B (ENSANAG00000029984) #36
Cebidae	ANCESTRAL SPECIES	17	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a.nb.b #19	ENSGT00390000004874.a.a.ob #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.e #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Marmoset	MODERN SPECIES	3	AVPI1 (ENSCJAG00000062664) #9	MARVELD1 (ENSCJAG00000016782) #10	ZFYVE27 (ENSCJAG00000016783) #11	SFRP5 (ENSCJAG00000016808) #12	ENSCJAG00000087255 #13	CRTAC1 (ENSCJAG00000016821) #14	R3HCC1L (ENSCJAG00000016839) #15	LOXL4 (ENSCJAG00000016875) #16	HPS1 (ENSCJAG00000016915) #18	HPSE2 (ENSCJAG00000016974) #19	ENSCJAG00000084878	ENSCJAG00000083271	CNNM1 (ENSCJAG00000016989) #20	GOT1 (ENSCJAG00000017037) #21	ENSCJAG00000086661	NKX2-3 (ENSCJAG00000017049) #22	SLC25A28 (ENSCJAG00000042303) #23	ENTPD7 (ENSCJAG00000017079) #24	COX15 (ENSCJAG00000017107) #25	CUTC (ENSCJAG00000017121) #26	ABCC2 (ENSCJAG00000017142) #27	ENSCJAG00000085790	DNMBP (ENSCJAG00000017162) #28	CPN1 (ENSCJAG00000017197) #29	ENSCJAG00000072049	ERLIN1 (ENSCJAG00000017211) #30	CHUK (ENSCJAG00000017244) #31	CWF19L1 (ENSCJAG00000017176) #32	BLOC1S2 (ENSCJAG00000017269) #33	PKD2L1 (ENSCJAG00000042503) #34	ENSCJAG00000045682 #35
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00730000111173 #7	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a.nb.b #19	ENSGT00390000004874.a.a.ob #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.e #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Capuchin	MODERN SPECIES	71	PPARGC1B (ENSCCAG00000026909)	PDE6A (ENSCCAG00000037978)	SLC26A2 (ENSCCAG00000020161)	ENSCCAG00000030622	HMGXB3 (ENSCCAG00000023989)	CSF1R (ENSCCAG00000033803)	ENSCCAG00000026641	PDGFRB (ENSCCAG00000031575)	CDX1 (ENSCCAG00000029914)	SLC6A7 (ENSCCAG00000033881)	CAMK2A (ENSCCAG00000029738)	ENSCCAG00000023659 #19	ENSCCAG00000020087	CNNM1 (ENSCCAG00000037324) #20	GOT1 (ENSCCAG00000036234) #21	NKX2-3 (ENSCCAG00000028510) #22	SLC25A28 (ENSCCAG00000022364) #23	ENTPD7 (ENSCCAG00000031589) #24	COX15 (ENSCCAG00000013919) #25	CUTC (ENSCCAG00000034368) #26	ABCC2 (ENSCCAG00000037977) #27	DNMBP (ENSCCAG00000036319) #28	CPN1 (ENSCCAG00000031716) #29	ERLIN1 (ENSCCAG00000036463) #30	CHUK (ENSCCAG00000033466) #31	CWF19L1 (ENSCCAG00000031321) #32	ENSCCAG00000027065 #33	PKD2L1 (ENSCCAG00000033020) #34	SCD (ENSCCAG00000031776) #35	WNT8B (ENSCCAG00000027693) #36	ENSCCAG00000030710
Bolivian squirrel monkey	MODERN SPECIES	47	ANKRD2 (ENSSBOG00000030371)	MORN4 (ENSSBOG00000033451) #7	PI4K2A (ENSSBOG00000034802) #8	ZFYVE27 (ENSSBOG00000019948) #11	SFRP5 (ENSSBOG00000014737) #12	GOLGA7B (ENSSBOG00000028559) #13	CRTAC1 (ENSSBOG00000028883) #14	R3HCC1L (ENSSBOG00000032433) #15	LOXL4 (ENSSBOG00000029353) #16	PYROXD2 (ENSSBOG00000029428) #17	HPS1 (ENSSBOG00000001543) #18	ENSSBOG00000025135	HPSE2 (ENSSBOG00000035316) #19	CNNM1 (ENSSBOG00000023360) #20	GOT1 (ENSSBOG00000029409) #21	NKX2-3 (ENSSBOG00000029445) #22	SLC25A28 (ENSSBOG00000024135) #23	ENSSBOG00000029982	ENTPD7 (ENSSBOG00000029450) #24	COX15 (ENSSBOG00000020356) #25	CUTC (ENSSBOG00000029115) #26	ABCC2 (ENSSBOG00000034924) #27	DNMBP (ENSSBOG00000021393) #28	CPN1 (ENSSBOG00000024485) #29	ENSSBOG00000022350	ERLIN1 (ENSSBOG00000033053) #30	CHUK (ENSSBOG00000024074) #31	CWF19L1 (ENSSBOG00000027396) #32	BLOC1S2 (ENSSBOG00000020521) #33	ENSSBOG00000026797	PKD2L1 (ENSSBOG00000033363) #34
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Tree shrew	MODERN SPECIES	842																NKX2-3 (ENSTBEG00000011031) #22
Glires	ANCESTRAL SPECIES	16	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Lagomorpha	ANCESTRAL SPECIES	17	ENSGT00390000015820	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049709	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Pika	MODERN SPECIES	606														ENSOPRG00000002329 #20	ENSOPRG00000002345 #21	ENSOPRG00000002368 #22
Rodentia	ANCESTRAL SPECIES	16	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000162971
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.s.a #35	ENSGT00940000162971
Kangaroo rat	MODERN SPECIES	355	Morn4 (ENSDORG00000016540) #7	Pi4k2a (ENSDORG00000002269) #8	Avpi1 (ENSDORG00000028399) #9	Marveld1 (ENSDORG00000002279) #10	Zfyve27 (ENSDORG00000008178) #11	Sfrp5 (ENSDORG00000008180) #12	Golga7b (ENSDORG00000015475) #13	Crtac1 (ENSDORG00000015477) #14	ENSDORG00000024055 #15	Loxl4 (ENSDORG00000015733) #16	Pyroxd2 (ENSDORG00000003802) #17	Hps1 (ENSDORG00000003804) #18	Hpse2 (ENSDORG00000003807) #19	Cnnm1 (ENSDORG00000014706) #20	Got1 (ENSDORG00000014708) #21	Nkx2-3 (ENSDORG00000003645) #22	Slc25a28 (ENSDORG00000003647) #23	Entpd7 (ENSDORG00000005426) #24	Cox15 (ENSDORG00000005427) #25	Cutc (ENSDORG00000005428) #26	ENSDORG00000028853	Abcc2 (ENSDORG00000009085) #27	ENSDORG00000011072 #28	Cpn1 (ENSDORG00000011960) #29	ENSDORG00000027804	Erlin1 (ENSDORG00000026468) #30	Chuk (ENSDORG00000011965) #31	Cwf19l1 (ENSDORG00000011967) #32	Bloc1s2 (ENSDORG00000028226) #33	Pkd2l1 (ENSDORG00000006223) #34	Scd4 (ENSDORG00000006872) #35
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.s.a #35	ENSGT00940000162971
Muroidea	ANCESTRAL SPECIES	1	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.s.a #35	ENSGT00940000162971.c.b
Muroidea_A	ANCESTRAL SPECIES		ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000162971.c.b	ENSGT00940000154908.s.b #35
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000162971.c.b	ENSGT00940000154908.s.b #35
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000162971.c.b	ENSGT00940000162971.d.b
Chinese hamster chok1gshd	MODERN SPECIES	263	Morn4 (ENSCGRG00001008672) #7	Pi4k2a (ENSCGRG00001006184) #8	Avpi1 (ENSCGRG00001003238) #9	Marveld1 (ENSCGRG00001015304) #10	Zfyve27 (ENSCGRG00001001467) #11	Sfrp5 (ENSCGRG00001000510) #12	Golga7b (ENSCGRG00001000198) #13	Crtac1 (ENSCGRG00001023131) #14	R3hcc1l (ENSCGRG00001022500) #15	Loxl4 (ENSCGRG00001021180) #16	Pyroxd2 (ENSCGRG00001020681) #17	Hps1 (ENSCGRG00001017475) #18	Hpse2 (ENSCGRG00001015117) #19	Cnnm1 (ENSCGRG00001012560) #20	Got1 (ENSCGRG00001012066) #21	Nkx2-3 (ENSCGRG00001011819) #22	ENSCGRG00001011590	Slc25a28 (ENSCGRG00001016289) #23	Entpd7 (ENSCGRG00001015434) #24	Cox15 (ENSCGRG00001014605) #25	Cutc (ENSCGRG00001013542) #26	Abcc2 (ENSCGRG00001011487) #27	Dnmbp (ENSCGRG00001002955) #28	Cpn1 (ENSCGRG00001020231) #29	Cyp2c23 (ENSCGRG00001019601)	Erlin1 (ENSCGRG00001018321) #30	Chuk (ENSCGRG00001016974) #31	Cwf19l1 (ENSCGRG00001015704) #32	Bloc1s2 (ENSCGRG00001015011) #33	Pkd2l1 (ENSCGRG00001014175) #34
Golden Hamster	MODERN SPECIES	617	Morn4 (ENSMAUG00000019301) #7	Pi4k2a (ENSMAUG00000018850) #8	Avpi1 (ENSMAUG00000020844) #9	Marveld1 (ENSMAUG00000020397) #10	Zfyve27 (ENSMAUG00000020339) #11	Sfrp5 (ENSMAUG00000019322) #12	Golga7b (ENSMAUG00000019120) #13	Crtac1 (ENSMAUG00000019399) #14	ENSMAUG00000018764 #15	Loxl4 (ENSMAUG00000019599) #16	Pyroxd2 (ENSMAUG00000017820) #17	Hps1 (ENSMAUG00000019246) #18	Hpse2 (ENSMAUG00000020448) #19	Cnnm1 (ENSMAUG00000018739) #20	Got1 (ENSMAUG00000017853) #21	Nkx2-3 (ENSMAUG00000019421) #22	Slc25a28 (ENSMAUG00000016762) #23	Entpd7 (ENSMAUG00000018067) #24	Cox15 (ENSMAUG00000019550) #25	Cutc (ENSMAUG00000017160) #26	Abcc2 (ENSMAUG00000017544) #27	Dnmbp (ENSMAUG00000021363) #28	Cpn1 (ENSMAUG00000020473) #29	Erlin1 (ENSMAUG00000019313) #30	Chuk (ENSMAUG00000017206) #31	Cwf19l1 (ENSMAUG00000016480) #32	Pkd2l1 (ENSMAUG00000017374) #34	Scd3 (ENSMAUG00000019555)	ENSMAUG00000018775	ENSMAUG00000016232 #35	ENSMAUG00000019193
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000162971.c.b	ENSGT00940000154908.s.b #35
Prairie vole	MODERN SPECIES	16	Pi4k2a (ENSMOCG00000012623) #8	Avpi1 (ENSMOCG00000012593) #9	Marveld1 (ENSMOCG00000013119) #10	Zfyve27 (ENSMOCG00000014672) #11	Sfrp5 (ENSMOCG00000017190) #12	Golga7b (ENSMOCG00000018394) #13	Crtac1 (ENSMOCG00000021947) #14	ENSMOCG00000019358 #15	Loxl4 (ENSMOCG00000018615) #16	Pyroxd2 (ENSMOCG00000003523) #17	Hps1 (ENSMOCG00000002839) #18	Hpse2 (ENSMOCG00000002351) #19	ENSMOCG00000002567	Cnnm1 (ENSMOCG00000006772) #20	Got1 (ENSMOCG00000022592) #21	Nkx2-3 (ENSMOCG00000013130) #22	Slc25a28 (ENSMOCG00000015560) #23	Entpd7 (ENSMOCG00000020235) #24	Cox15 (ENSMOCG00000001780) #25	Cutc (ENSMOCG00000002743) #26	Abcc2 (ENSMOCG00000008644) #27	Dnmbp (ENSMOCG00000015535) #28	Cpn1 (ENSMOCG00000020512) #29	ENSMOCG00000022931	Erlin1 (ENSMOCG00000017984) #30	Chuk (ENSMOCG00000020869) #31	Cwf19l1 (ENSMOCG00000021513) #32	Bloc1s2 (ENSMOCG00000003511) #33	Pkd2l1 (ENSMOCG00000006800) #34	Scd3 (ENSMOCG00000001880)	Scd2 (ENSMOCG00000018751) #35
Northern American deer mouse	MODERN SPECIES		Morn4 (ENSPEMG00000027726) #7	Pi4k2a (ENSPEMG00000016260) #8	Avpi1 (ENSPEMG00000011234) #9	Marveld1 (ENSPEMG00000000505) #10	Zfyve27 (ENSPEMG00000000658) #11	Sfrp5 (ENSPEMG00000018114) #12	Golga7b (ENSPEMG00000019018) #13	Crtac1 (ENSPEMG00000018527) #14	R3hcc1l (ENSPEMG00000009290) #15	Loxl4 (ENSPEMG00000013107) #16	Pyroxd2 (ENSPEMG00000008189) #17	Hps1 (ENSPEMG00000016367) #18	Hpse2 (ENSPEMG00000009236) #19	Cnnm1 (ENSPEMG00000007501) #20	Got1 (ENSPEMG00000010376) #21	Nkx2-3 (ENSPEMG00000030266) #22	Slc25a28 (ENSPEMG00000012732) #23	Entpd7 (ENSPEMG00000010179) #24	Cox15 (ENSPEMG00000014240) #25	Cutc (ENSPEMG00000008839) #26	Abcc2 (ENSPEMG00000011249) #27	Dnmbp (ENSPEMG00000004169) #28	Cpn1 (ENSPEMG00000017111) #29	Cyp2c23 (ENSPEMG00000009996)	Erlin1 (ENSPEMG00000018538) #30	Chuk (ENSPEMG00000003607) #31	Cwf19l1 (ENSPEMG00000013069) #32	ENSPEMG00000028291	Bloc1s2 (ENSPEMG00000015678) #33	Pkd2l1 (ENSPEMG00000003667) #34	Scd3 (ENSPEMG00000030007)
Murinae	ANCESTRAL SPECIES		ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000162971.c.b	ENSGT00940000154908.s.b #35
Mus	ANCESTRAL SPECIES		ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000162971.c.b	ENSGT00940000154908.s.b #35
Mus_A	ANCESTRAL SPECIES	16	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000162971.c.b	ENSGT00940000154908.s.b #35
Mus_B	ANCESTRAL SPECIES	16	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000162971.c.b	ENSGT00940000154908.s.b #35
Mus_C	ANCESTRAL SPECIES	24	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000162971.c.b	ENSGT00940000154908.s.b #35
spretus	MODERN SPECIES	10	Morn4 (MGP_SPRETEiJ_G0023887) #7	Pi4k2a (MGP_SPRETEiJ_G0023888) #8	Avpi1 (MGP_SPRETEiJ_G0023889) #9	Marveld1 (MGP_SPRETEiJ_G0023890) #10	Zfyve27 (MGP_SPRETEiJ_G0023891) #11	Sfrp5 (MGP_SPRETEiJ_G0023892) #12	Golga7b (MGP_SPRETEiJ_G0023893) #13	Crtac1 (MGP_SPRETEiJ_G0023894) #14	R3hcc1l (MGP_SPRETEiJ_G0023895) #15	Loxl4 (MGP_SPRETEiJ_G0023896) #16	Pyroxd2 (MGP_SPRETEiJ_G0023897) #17	Hps1 (MGP_SPRETEiJ_G0023898) #18	Hpse2 (MGP_SPRETEiJ_G0023899) #19	Cnnm1 (MGP_SPRETEiJ_G0023900) #20	Got1 (MGP_SPRETEiJ_G0023901) #21	Nkx2-3 (MGP_SPRETEiJ_G0023902) #22	Slc25a28 (MGP_SPRETEiJ_G0023903) #23	Entpd7 (MGP_SPRETEiJ_G0023904) #24	Cox15 (MGP_SPRETEiJ_G0023905) #25	Cutc (MGP_SPRETEiJ_G0023906) #26	Abcc2 (MGP_SPRETEiJ_G0023907) #27	Dnmbp (MGP_SPRETEiJ_G0023908) #28	Cpn1 (MGP_SPRETEiJ_G0023909) #29	Cyp2c23 (MGP_SPRETEiJ_G0023910)	Erlin1 (MGP_SPRETEiJ_G0023911) #30	Chuk (MGP_SPRETEiJ_G0023912) #31	Cwf19l1 (MGP_SPRETEiJ_G0023913) #32	Bloc1s2 (MGP_SPRETEiJ_G0023914) #33	Pkd2l1 (MGP_SPRETEiJ_G0023915) #34	Scd3 (MGP_SPRETEiJ_G0023916)	Scd2 (MGP_SPRETEiJ_G0023917) #35
Steppe mouse	MODERN SPECIES	3317												ENSMSIG00000014659	ENSMSIG00000014652 #19	Cnnm1 (ENSMSIG00000014602) #20	ENSMSIG00000014579 #21	Nkx2-3 (ENSMSIG00000014564) #22	Slc25a28 (ENSMSIG00000014549) #23	Entpd7 (ENSMSIG00000014516) #24	Cox15 (ENSMSIG00000014488) #25	Cutc (ENSMSIG00000014461) #26	Abcc2 (ENSMSIG00000014396) #27	Dnmbp (ENSMSIG00000013995) #28	Cpn1 (ENSMSIG00000013970) #29	ENSMSIG00000013896	Chuk (ENSMSIG00000013784) #31	Cwf19l1 (ENSMSIG00000013717) #32	ENSMSIG00000013690 #33	Pkd2l1 (ENSMSIG00000013623) #34	ENSMSIG00000013604 #35	ENSMSIG00000013578	ENSMSIG00000013562
Mouse	MODERN SPECIES	10	Morn4 (ENSMUSG00000049670) #7	Pi4k2a (ENSMUSG00000025178) #8	Avpi1 (ENSMUSG00000018821) #9	Marveld1 (ENSMUSG00000044345) #10	Zfyve27 (ENSMUSG00000018820) #11	Sfrp5 (ENSMUSG00000018822) #12	Golga7b (ENSMUSG00000042532) #13	Crtac1 (ENSMUSG00000042401) #14	R3hcc1l (ENSMUSG00000025184) #15	Loxl4 (ENSMUSG00000025185) #16	Pyroxd2 (ENSMUSG00000060224) #17	Hps1 (ENSMUSG00000025188) #18	Hpse2 (ENSMUSG00000074852) #19	Cnnm1 (ENSMUSG00000025189) #20	Got1 (ENSMUSG00000025190) #21	Nkx2-3 (ENSMUSG00000044220) #22	Slc25a28 (ENSMUSG00000040414) #23	Entpd7 (ENSMUSG00000025192) #24	Cox15 (ENSMUSG00000040018) #25	Cutc (ENSMUSG00000025193) #26	Abcc2 (ENSMUSG00000025194) #27	Dnmbp (ENSMUSG00000025195) #28	Cpn1 (ENSMUSG00000025196) #29	Cyp2c23 (ENSMUSG00000025197)	Erlin1 (ENSMUSG00000025198) #30	Chuk (ENSMUSG00000025199) #31	Cwf19l1 (ENSMUSG00000025200) #32	Bloc1s2 (ENSMUSG00000057506) #33	Pkd2l1 (ENSMUSG00000037578) #34	Scd3 (ENSMUSG00000025202)	Scd2 (ENSMUSG00000025203) #35
Ryukyu mouse	MODERN SPECIES	10	Morn4 (MGP_CAROLIEiJ_G0022966) #7	Pi4k2a (MGP_CAROLIEiJ_G0022967) #8	Avpi1 (MGP_CAROLIEiJ_G0022968) #9	Marveld1 (MGP_CAROLIEiJ_G0022969) #10	Zfyve27 (MGP_CAROLIEiJ_G0022970) #11	Sfrp5 (MGP_CAROLIEiJ_G0022971) #12	Golga7b (MGP_CAROLIEiJ_G0022972) #13	Crtac1 (MGP_CAROLIEiJ_G0022973) #14	R3hcc1l (MGP_CAROLIEiJ_G0022974) #15	Loxl4 (MGP_CAROLIEiJ_G0022975) #16	Pyroxd2 (MGP_CAROLIEiJ_G0022976) #17	Hps1 (MGP_CAROLIEiJ_G0022977) #18	Hpse2 (MGP_CAROLIEiJ_G0022978) #19	Cnnm1 (MGP_CAROLIEiJ_G0022979) #20	Got1 (MGP_CAROLIEiJ_G0022980) #21	Nkx2-3 (MGP_CAROLIEiJ_G0022981) #22	Slc25a28 (MGP_CAROLIEiJ_G0022982) #23	Entpd7 (MGP_CAROLIEiJ_G0022983) #24	Cox15 (MGP_CAROLIEiJ_G0022984) #25	Cutc (MGP_CAROLIEiJ_G0022985) #26	Abcc2 (MGP_CAROLIEiJ_G0022986) #27	Dnmbp (MGP_CAROLIEiJ_G0022987) #28	Cpn1 (MGP_CAROLIEiJ_G0022988) #29	Cyp2c23 (MGP_CAROLIEiJ_G0022989)	Erlin1 (MGP_CAROLIEiJ_G0022990) #30	Chuk (MGP_CAROLIEiJ_G0022991) #31	Cwf19l1 (MGP_CAROLIEiJ_G0022992) #32	Bloc1s2 (MGP_CAROLIEiJ_G0022993) #33	Pkd2l1 (MGP_CAROLIEiJ_G0022994) #34	Scd3 (MGP_CAROLIEiJ_G0022995)	Scd2 (MGP_CAROLIEiJ_G0022996) #35
Shrew mouse	MODERN SPECIES		Morn4 (MGP_PahariEiJ_G0014456) #7	Pi4k2a (MGP_PahariEiJ_G0014457) #8	Avpi1 (MGP_PahariEiJ_G0014458) #9	Marveld1 (MGP_PahariEiJ_G0014459) #10	Zfyve27 (MGP_PahariEiJ_G0014460) #11	Sfrp5 (MGP_PahariEiJ_G0014461) #12	Golga7b (MGP_PahariEiJ_G0014462) #13	Crtac1 (MGP_PahariEiJ_G0014463) #14	R3hcc1l (MGP_PahariEiJ_G0014464) #15	Loxl4 (MGP_PahariEiJ_G0014465) #16	Pyroxd2 (MGP_PahariEiJ_G0014466) #17	Hps1 (MGP_PahariEiJ_G0014467) #18	Hpse2 (MGP_PahariEiJ_G0014468) #19	Cnnm1 (MGP_PahariEiJ_G0014469) #20	Got1 (MGP_PahariEiJ_G0014470) #21	Nkx2-3 (MGP_PahariEiJ_G0014471) #22	Slc25a28 (MGP_PahariEiJ_G0014472) #23	Entpd7 (MGP_PahariEiJ_G0014473) #24	Cox15 (MGP_PahariEiJ_G0014474) #25	Cutc (MGP_PahariEiJ_G0014475) #26	Abcc2 (MGP_PahariEiJ_G0014476) #27	Dnmbp (MGP_PahariEiJ_G0014477) #28	Cpn1 (MGP_PahariEiJ_G0014478) #29	Cyp2c23 (MGP_PahariEiJ_G0014479)	Erlin1 (MGP_PahariEiJ_G0014480) #30	Chuk (MGP_PahariEiJ_G0014481) #31	Cwf19l1 (MGP_PahariEiJ_G0014482) #32	Bloc1s2 (MGP_PahariEiJ_G0014483) #33	Pkd2l1 (MGP_PahariEiJ_G0014484) #34	Scd3 (MGP_PahariEiJ_G0014485)	Scd2 (MGP_PahariEiJ_G0014486) #35
Rat	MODERN SPECIES		Avpi1 (ENSRNOG00000014828) #9	Marveld1 (ENSRNOG00000042620)	Zfyve27 (ENSRNOG00000014903) #11	Sfrp5 (ENSRNOG00000014940) #12	AABR07006871.1 (ENSRNOG00000053536)	Golga7b (ENSRNOG00000015051) #13	Crtac1 (ENSRNOG00000015220) #14	R3hcc1l (ENSRNOG00000051256) #15	Loxl4 (ENSRNOG00000015727) #16	Pyroxd2 (ENSRNOG00000015807) #17	Hps1 (ENSRNOG00000045838) #18	Hpse2 (ENSRNOG00000064037) #19	ENSRNOG00000065211	Cnnm1 (ENSRNOG00000016302) #20	Got1 (ENSRNOG00000016356) #21	Nkx2-3 (ENSRNOG00000016656) #22	Slc25a28 (ENSRNOG00000016751) #23	Entpd7 (ENSRNOG00000016883) #24	Cox15 (ENSRNOG00000017230) #25	Cutc (ENSRNOG00000017298) #26	Abcc2 (ENSRNOG00000046727) #27	Dnmbp (ENSRNOG00000050742) #28	Cpn1 (ENSRNOG00000013439) #29	Cyp2c23 (ENSRNOG00000013291)	Erlin1 (ENSRNOG00000012911) #30	Chuk (ENSRNOG00000022485) #31	Cwf19l1 (ENSRNOG00000012763) #32	Bloc1s2 (ENSRNOG00000012684) #33	Pkd2l1 (ENSRNOG00000012591) #34	LOC681458 (ENSRNOG00000013279)	Scd2 (ENSRNOG00000046005) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	771	Morn4 (ENSNGAG00000018405) #7	Pi4k2a (ENSNGAG00000022396) #8	Avpi1 (ENSNGAG00000020134) #9	Marveld1 (ENSNGAG00000006309) #10	Zfyve27 (ENSNGAG00000012854) #11	Sfrp5 (ENSNGAG00000022581) #12	Golga7b (ENSNGAG00000001605) #13	Crtac1 (ENSNGAG00000021345) #14	ENSNGAG00000017124 #15	Loxl4 (ENSNGAG00000014165) #16	Pyroxd2 (ENSNGAG00000021947) #17	Hps1 (ENSNGAG00000013601) #18	Hpse2 (ENSNGAG00000021159) #19	Cnnm1 (ENSNGAG00000016351) #20	Got1 (ENSNGAG00000005165) #21	Nkx2-3 (ENSNGAG00000021093) #22	Slc25a28 (ENSNGAG00000023260) #23	Entpd7 (ENSNGAG00000012372) #24	Cox15 (ENSNGAG00000023623) #25	Cutc (ENSNGAG00000024190) #26	Abcc2 (ENSNGAG00000017615) #27	Dnmbp (ENSNGAG00000011513) #28
Lesser Egyptian jerboa	MODERN SPECIES	179	Morn4 (ENSJJAG00000013030) #7	Pi4k2a (ENSJJAG00000021991) #8	Avpi1 (ENSJJAG00000021703) #9	Marveld1 (ENSJJAG00000012601) #10	Zfyve27 (ENSJJAG00000005638) #11	Sfrp5 (ENSJJAG00000022836) #12	Golga7b (ENSJJAG00000021511) #13	Crtac1 (ENSJJAG00000020645) #14	ENSJJAG00000020251 #15	Loxl4 (ENSJJAG00000013296) #16	Pyroxd2 (ENSJJAG00000022532) #17	Hps1 (ENSJJAG00000017073) #18	Hpse2 (ENSJJAG00000015190) #19	Cnnm1 (ENSJJAG00000013432) #20	Got1 (ENSJJAG00000019106) #21	Nkx2-3 (ENSJJAG00000017127) #22	Slc25a28 (ENSJJAG00000016611) #23	ENSJJAG00000015832	Entpd7 (ENSJJAG00000015308) #24	ENSJJAG00000012745	Cox15 (ENSJJAG00000011715) #25	ENSJJAG00000010550 #26	Abcc2 (ENSJJAG00000020088) #27	Dnmbp (ENSJJAG00000017540) #28	Cpn1 (ENSJJAG00000016862) #29	Erlin1 (ENSJJAG00000016685) #30	ENSJJAG00000016093 #31	Cwf19l1 (ENSJJAG00000015368) #32	ENSJJAG00000015079 #33	Pkd2l1 (ENSJJAG00000013834) #34	ENSJJAG00000012197
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000162971
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000162971.b
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000162971.b
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.o #35	ENSGT00390000017352.c
Degu	MODERN SPECIES	51	AVPI1 (ENSODEG00000016690) #9	MARVELD1 (ENSODEG00000016451) #10	ZFYVE27 (ENSODEG00000016383) #11	SFRP5 (ENSODEG00000016215) #12	GOLGA7B (ENSODEG00000016294) #13	CRTAC1 (ENSODEG00000015999) #14	ENSODEG00000016256 #15	ENSODEG00000016477	LOXL4 (ENSODEG00000016342) #16	PYROXD2 (ENSODEG00000016020) #17	HPS1 (ENSODEG00000016655) #18	HPSE2 (ENSODEG00000016711) #19	ENSODEG00000016599	CNNM1 (ENSODEG00000016538) #20	GOT1 (ENSODEG00000016726) #21	NKX2-3 (ENSODEG00000016861) #22	ENSODEG00000016497 #23	ENTPD7 (ENSODEG00000016776) #24	ENSODEG00000016548	ENSODEG00000016221 #25	CUTC (ENSODEG00000016369) #26	ABCC2 (ENSODEG00000016634) #27	DNMBP (ENSODEG00000017308) #28	CPN1 (ENSODEG00000016323) #29	ENSODEG00000020402	ENSODEG00000016389	ENSODEG00000020374	ERLIN1 (ENSODEG00000016587) #30	CHUK (ENSODEG00000016580) #31	CWF19L1 (ENSODEG00000017213) #32	BLOC1S2 (ENSODEG00000016697) #33
Long-tailed chinchilla	MODERN SPECIES	214	MORN4 (ENSCLAG00000001852) #7	PI4K2A (ENSCLAG00000001867) #8	AVPI1 (ENSCLAG00000001993) #9	MARVELD1 (ENSCLAG00000002008) #10	ZFYVE27 (ENSCLAG00000002084) #11	SFRP5 (ENSCLAG00000002118) #12	GOLGA7B (ENSCLAG00000002560) #13	CRTAC1 (ENSCLAG00000002601) #14	R3HCC1L (ENSCLAG00000002695) #15	LOXL4 (ENSCLAG00000002846) #16	PYROXD2 (ENSCLAG00000003225) #17	HPS1 (ENSCLAG00000003379) #18	HPSE2 (ENSCLAG00000001979) #19	CNNM1 (ENSCLAG00000002026) #20	GOT1 (ENSCLAG00000002152) #21	NKX2-3 (ENSCLAG00000002178) #22	SLC25A28 (ENSCLAG00000002948) #23	ENTPD7 (ENSCLAG00000004017) #24	COX15 (ENSCLAG00000004070) #25	CUTC (ENSCLAG00000004139) #26	ABCC2 (ENSCLAG00000003041) #27	DNMBP (ENSCLAG00000003323) #28	CPN1 (ENSCLAG00000003686) #29	ENSCLAG00000003725	ERLIN1 (ENSCLAG00000003770) #30	CHUK (ENSCLAG00000003896) #31	CWF19L1 (ENSCLAG00000007821) #32	BLOC1S2 (ENSCLAG00000012543) #33	PKD2L1 (ENSCLAG00000012878) #34	SCD (ENSCLAG00000002366) #35	SYCE1 (ENSCLAG00000002691)
Guinea pig	MODERN SPECIES	1	PI4K2A (ENSCPOG00000004558) #8	AVPI1 (ENSCPOG00000024508) #9	MARVELD1 (ENSCPOG00000024434) #10	ENSCPOG00000013283 #11	SFRP5 (ENSCPOG00000021880) #12	GOLGA7B (ENSCPOG00000031966) #13	CRTAC1 (ENSCPOG00000007832) #14	R3HCC1L (ENSCPOG00000007004) #15	LOXL4 (ENSCPOG00000007010) #16	PYROXD2 (ENSCPOG00000007018) #17	HPS1 (ENSCPOG00000007029) #18	HPSE2 (ENSCPOG00000007040) #19	ENSCPOG00000020409	CNNM1 (ENSCPOG00000008627) #20	GOT1 (ENSCPOG00000008633) #21	NKX2-3 (ENSCPOG00000009772) #22	SLC25A28 (ENSCPOG00000036710) #23	ENTPD7 (ENSCPOG00000009780) #24	COX15 (ENSCPOG00000009783) #25	CUTC (ENSCPOG00000010941) #26	ABCC2 (ENSCPOG00000010942) #27	DNMBP (ENSCPOG00000005939) #28	CPN1 (ENSCPOG00000000190) #29	ENSCPOG00000026359	ERLIN1 (ENSCPOG00000026732) #30	CHUK (ENSCPOG00000022931) #31	CWF19L1 (ENSCPOG00000010890) #32	BLOC1S2 (ENSCPOG00000039806) #33	PKD2L1 (ENSCPOG00000010906) #34	ENSCPOG00000011758 #35	ENSCPOG00000039244
Naked mole-rat female	MODERN SPECIES	4	LRRTM3 (ENSHGLG00000016164)	ENSHGLG00000038381	ENSHGLG00000014093	ENSHGLG00000035976	ENSHGLG00000010600 #16	ENSHGLG00000042684 #15	ENSHGLG00000020899	ENSHGLG00000009871 #17	ENSHGLG00000013798 #18	ENSHGLG00000012447	ENSHGLG00000045765	ENSHGLG00000009626	ENSHGLG00000014473 #19	CNNM1 (ENSHGLG00000009827) #20	GOT1 (ENSHGLG00000010094) #21	NKX2-3 (ENSHGLG00000042373) #22	ENSHGLG00000020927	SLC25A28 (ENSHGLG00000034471) #23	ENTPD7 (ENSHGLG00000017820) #24	COX15 (ENSHGLG00000041126) #25	CUTC (ENSHGLG00000019050) #26	ABCC2 (ENSHGLG00000014313) #27	DNMBP (ENSHGLG00000010974) #28	ENSHGLG00000040272	ENSHGLG00000037421	ENSHGLG00000031990	CPN1 (ENSHGLG00000012757) #29	ERLIN1 (ENSHGLG00000047763) #30	CHUK (ENSHGLG00000019084) #31	CWF19L1 (ENSHGLG00000018918) #32	BLOC1S2 (ENSHGLG00000034121) #33
Sciuridae	ANCESTRAL SPECIES	21	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.q.b #35	ENSGT00940000154908.q.a.b #35	ENSGT00940000154908.q.a.a.a.a #35
Marmotini	ANCESTRAL SPECIES	16	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.q.b #35	ENSGT01030000234637.a.b.b.j.a	ENSGT00940000154908.q.a.b #35
Marmotini_b	ANCESTRAL SPECIES	97	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32
Arctic ground squirrel	MODERN SPECIES	145	PI4K2A (ENSUPAG00010014721) #8	AVPI1 (ENSUPAG00010014745) #9	MARVELD1 (ENSUPAG00010014753) #10	ZFYVE27 (ENSUPAG00010014758) #11	SFRP5 (ENSUPAG00010014793) #12	GOLGA7B (ENSUPAG00010014804) #13	CRTAC1 (ENSUPAG00010014843) #14	R3HCC1L (ENSUPAG00010014922) #15	LOXL4 (ENSUPAG00010014949) #16	PYROXD2 (ENSUPAG00010015034) #17	HPS1 (ENSUPAG00010015101) #18	HPSE2 (ENSUPAG00010018211) #19	CNNM1 (ENSUPAG00010018225) #20	GOT1 (ENSUPAG00010018253) #21	ENSUPAG00010018264	NKX2-3 (ENSUPAG00010018277) #22	SLC25A28 (ENSUPAG00010018285) #23	ENTPD7 (ENSUPAG00010018296) #24	COX15 (ENSUPAG00010018308) #25	CUTC (ENSUPAG00010018317) #26	ABCC2 (ENSUPAG00010018333) #27	DNMBP (ENSUPAG00010018385) #28	CPN1 (ENSUPAG00010018515) #29	ERLIN1 (ENSUPAG00010018524) #30	CHUK (ENSUPAG00010018536) #31	CWF19L1 (ENSUPAG00010018584) #32
Squirrel	MODERN SPECIES	236	MORN4 (ENSSTOG00000026926) #7	PI4K2A (ENSSTOG00000006737) #8	AVPI1 (ENSSTOG00000029293) #9	MARVELD1 (ENSSTOG00000006756) #10	ZFYVE27 (ENSSTOG00000012103) #11	SFRP5 (ENSSTOG00000012113) #12	GOLGA7B (ENSSTOG00000012116) #13	CRTAC1 (ENSSTOG00000012122) #14	R3HCC1L (ENSSTOG00000021571) #15	LOXL4 (ENSSTOG00000026677) #16	PYROXD2 (ENSSTOG00000003659) #17	HPS1 (ENSSTOG00000003686) #18	HPSE2 (ENSSTOG00000003713) #19	CNNM1 (ENSSTOG00000019801) #20	GOT1 (ENSSTOG00000007527) #21	NKX2-3 (ENSSTOG00000010439) #22	SLC25A28 (ENSSTOG00000027786) #23	ENTPD7 (ENSSTOG00000010447) #24	COX15 (ENSSTOG00000010459) #25	CUTC (ENSSTOG00000010467) #26	ABCC2 (ENSSTOG00000009688) #27	DNMBP (ENSSTOG00000008832) #28	CPN1 (ENSSTOG00000008870) #29	ERLIN1 (ENSSTOG00000028018) #30	CHUK (ENSSTOG00000016412) #31	CWF19L1 (ENSSTOG00000005784) #32
Alpin marmot	MODERN SPECIES	39	C10orf62 (ENSMMMG00000021691)	ENSMMMG00000021693 #7	PI4K2A (ENSMMMG00000021697) #8	AVPI1 (ENSMMMG00000021725) #9	ZFYVE27 (ENSMMMG00000021729) #11	SFRP5 (ENSMMMG00000021743) #12	GOLGA7B (ENSMMMG00000021751) #13	CRTAC1 (ENSMMMG00000021757) #14	R3HCC1L (ENSMMMG00000021780) #15	LOXL4 (ENSMMMG00000021798) #16	PYROXD2 (ENSMMMG00000021833) #17	HPS1 (ENSMMMG00000021856) #18	HPSE2 (ENSMMMG00000022778) #19	CNNM1 (ENSMMMG00000022793) #20	GOT1 (ENSMMMG00000022811) #21	NKX2-3 (ENSMMMG00000022815) #22	SLC25A28 (ENSMMMG00000022817) #23	ENTPD7 (ENSMMMG00000022820) #24	COX15 (ENSMMMG00000022826) #25	ENSMMMG00000022829 #26	ABCC2 (ENSMMMG00000022832) #27	DNMBP (ENSMMMG00000022849) #28	CPN1 (ENSMMMG00000022921) #29	ERLIN1 (ENSMMMG00000022928) #30	CHUK (ENSMMMG00000022931) #31	CWF19L1 (ENSMMMG00000022947) #32	BLOC1S2 (ENSMMMG00000022960) #33	PKD2L1 (ENSMMMG00000022963) #34	ENSMMMG00000022972 #35	ENSMMMG00000022981	ENSMMMG00000022983 #35
Eurasian red squirrel	MODERN SPECIES	13	MORN4 (ENSSVLG00005016417) #7	PI4K2A (ENSSVLG00005016376) #8	AVPI1 (ENSSVLG00005016336) #9	MARVELD1 (ENSSVLG00005016317) #10	ZFYVE27 (ENSSVLG00005015995) #11	SFRP5 (ENSSVLG00005015909) #12	GOLGA7B (ENSSVLG00005015799) #13	CRTAC1 (ENSSVLG00005015382) #14	R3HCC1L (ENSSVLG00005015247) #15	LOXL4 (ENSSVLG00005015215) #16	PYROXD2 (ENSSVLG00005015178) #17	HPS1 (ENSSVLG00005014775) #18	HPSE2 (ENSSVLG00005014098) #19	CNNM1 (ENSSVLG00005013611) #20	GOT1 (ENSSVLG00005013505) #21	NKX2-3 (ENSSVLG00005013448) #22	SLC25A28 (ENSSVLG00005013360) #23	ENTPD7 (ENSSVLG00005013324) #24	COX15 (ENSSVLG00005013263) #25	CUTC (ENSSVLG00005013175) #26	ABCC2 (ENSSVLG00005012720) #27	DNMBP (ENSSVLG00005012459) #28	CPN1 (ENSSVLG00005012310) #29	ENSSVLG00005012246	ERLIN1 (ENSSVLG00005012186) #30	CHUK (ENSSVLG00005012127) #31	CWF19L1 (ENSSVLG00005012058) #32	BLOC1S2 (ENSSVLG00005011909) #33	PKD2L1 (ENSSVLG00005011378) #34	ENSSVLG00005011263 #35	ENSSVLG00005011226 #35
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157556 #22
Hedgehog	MODERN SPECIES	15230																NKX2-3 (ENSEEUG00000013947) #22
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Suina	ANCESTRAL SPECIES	6	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Chacoan peccary	MODERN SPECIES	955	MORN4 (ENSCWAG00000012823) #7	PI4K2A (ENSCWAG00000012772) #8	AVPI1 (ENSCWAG00000012736) #9	MARVELD1 (ENSCWAG00000012717) #10	ZFYVE27 (ENSCWAG00000012082) #11	SFRP5 (ENSCWAG00000011979) #12	GOLGA7B (ENSCWAG00000011885) #13	CRTAC1 (ENSCWAG00000020281) #14	R3HCC1L (ENSCWAG00000020239) #15	LOXL4 (ENSCWAG00000020224) #16	PYROXD2 (ENSCWAG00000020183) #17	HPS1 (ENSCWAG00000020101) #18	HPSE2 (ENSCWAG00000019523) #19	CNNM1 (ENSCWAG00000019424) #20	GOT1 (ENSCWAG00000019394) #21	NKX2-3 (ENSCWAG00000019366) #22	SLC25A28 (ENSCWAG00000019343) #23	ENTPD7 (ENSCWAG00000019327) #24	COX15 (ENSCWAG00000019302) #25	CUTC (ENSCWAG00000019263) #26	ABCC2 (ENSCWAG00000019120) #27	DNMBP (ENSCWAG00000018951) #28	CPN1 (ENSCWAG00000018888) #29	ENSCWAG00000018841	ERLIN1 (ENSCWAG00000018810) #30	CHUK (ENSCWAG00000018766) #31	CWF19L1 (ENSCWAG00000018713) #32	BLOC1S2 (ENSCWAG00000018677) #33	PKD2L1 (ENSCWAG00000018585) #34	SCD (ENSCWAG00000018554) #35	WNT8B (ENSCWAG00000018508) #36
Pig	MODERN SPECIES	5	MORN4 (ENSSSCG00000036954) #7	PI4K2A (ENSSSCG00000010525) #8	AVPI1 (ENSSSCG00000036824) #9	MARVELD1 (ENSSSCG00000010527) #10	ZFYVE27 (ENSSSCG00000010528) #11	SFRP5 (ENSSSCG00000010529) #12	GOLGA7B (ENSSSCG00000040359) #13	CRTAC1 (ENSSSCG00000010530) #14	ENSSSCG00000010531 #15	LOXL4 (ENSSSCG00000010532) #16	PYROXD2 (ENSSSCG00000010533) #17	HPS1 (ENSSSCG00000010534) #18	HPSE2 (ENSSSCG00000010535) #19	CNNM1 (ENSSSCG00000010536) #20	GOT1 (ENSSSCG00000010537) #21	NKX2-3 (ENSSSCG00000010538) #22	SLC25A28 (ENSSSCG00000037536) #23	ENTPD7 (ENSSSCG00000010540) #24	COX15 (ENSSSCG00000010541) #25	CUTC (ENSSSCG00000010542) #26	ABCC2 (ENSSSCG00000010543) #27	DNMBP (ENSSSCG00000010544) #28	CPN1 (ENSSSCG00000010545) #29	ENSSSCG00000058016	ENSSSCG00000010546	CHUK (ENSSSCG00000010548) #31	CWF19L1 (ENSSSCG00000010550) #32	BLOC1S2 (ENSSSCG00000010551) #33	PKD2L1 (ENSSSCG00000010552) #34	SCD (ENSSSCG00000010554) #35	WNT8B (ENSSSCG00000006164) #36
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Camelidae	ANCESTRAL SPECIES	4	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Arabian camel	MODERN SPECIES	2	MORN4 (ENSCDRG00005005757) #7	PI4K2A (ENSCDRG00005005722) #8	AVPI1 (ENSCDRG00005005710) #9	MARVELD1 (ENSCDRG00005005688) #10	ZFYVE27 (ENSCDRG00005005050) #11	SFRP5 (ENSCDRG00005004990) #12	GOLGA7B (ENSCDRG00005004929) #13	CRTAC1 (ENSCDRG00005004684) #14	R3HCC1L (ENSCDRG00005004585) #15	LOXL4 (ENSCDRG00005004555) #16	PYROXD2 (ENSCDRG00005004408) #17	HPS1 (ENSCDRG00005004078) #18	HPSE2 (ENSCDRG00005003939) #19	CNNM1 (ENSCDRG00005003816) #20	GOT1 (ENSCDRG00005003760) #21	NKX2-3 (ENSCDRG00005003725) #22	SLC25A28 (ENSCDRG00005003655) #23	ENTPD7 (ENSCDRG00005003625) #24	COX15 (ENSCDRG00005003507) #25	CUTC (ENSCDRG00005003453) #26	ABCC2 (ENSCDRG00005003408) #27	DNMBP (ENSCDRG00005003309) #28	CPN1 (ENSCDRG00005003276) #29	ENSCDRG00005019453	ERLIN1 (ENSCDRG00005019412) #30	CHUK (ENSCDRG00005019321) #31	CWF19L1 (ENSCDRG00005019282) #32	BLOC1S2 (ENSCDRG00005019254) #33	PKD2L1 (ENSCDRG00005019183) #34	SCD (ENSCDRG00005019165) #35	WNT8B (ENSCDRG00005019137) #36
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Cetacea	ANCESTRAL SPECIES	15	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00950000183178.b.a.kb	ENSGT00940000158235 #29	ENSGT00950000182965.b.ab	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34
Sperm whale	MODERN SPECIES	12	MMS19 (ENSPCTG00005012756)	ZDHHC16 (ENSPCTG00005012891)	EXOSC1 (ENSPCTG00005013217)	PGAM1 (ENSPCTG00005013367)	ENSPCTG00005013431	PI4K2A (ENSPCTG00005013487) #8	AVPI1 (ENSPCTG00005013541) #9	MARVELD1 (ENSPCTG00005013584) #10	ZFYVE27 (ENSPCTG00005013655) #11	SFRP5 (ENSPCTG00005014239) #12	R3HCC1L (ENSPCTG00005014293) #15	ENSPCTG00005014329 #18	HPSE2 (ENSPCTG00005014453) #19	CNNM1 (ENSPCTG00005015224) #20	GOT1 (ENSPCTG00005015383) #21	NKX2-3 (ENSPCTG00005015458) #22	ENSPCTG00005015512	SLC25A28 (ENSPCTG00005015533) #23	ENTPD7 (ENSPCTG00005015609) #24	COX15 (ENSPCTG00005015651) #25	CUTC (ENSPCTG00005015684) #26	ABCC2 (ENSPCTG00005015837) #27	DNMBP (ENSPCTG00005016252) #28	ENSPCTG00005016793	CPN1 (ENSPCTG00005016823) #29	ENSPCTG00005016952	ENSPCTG00005016969	ENSPCTG00005017035	ENSPCTG00005017133	ERLIN1 (ENSPCTG00005017152) #30	CHUK (ENSPCTG00005017211) #31
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00950000183178.b.a.kb	ENSGT00940000158235 #29	ENSGT00950000182965.b.ab	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34
Dolphin	MODERN SPECIES	41														CNNM1 (ENSTTRG00000002161) #20	GOT1 (ENSTTRG00000002165) #21	NKX2-3 (ENSTTRG00000002171) #22
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00950000182922.a.b.e.b	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00950000183178.b.a.kb	ENSGT00940000158235 #29	ENSGT00950000182965.b.ab	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33
Vaquita	MODERN SPECIES	7	HOGA1 (ENSPSNG00000020786)	MORN4 (ENSPSNG00000020862) #7	PI4K2A (ENSPSNG00000020904) #8	AVPI1 (ENSPSNG00000020938) #9	MARVELD1 (ENSPSNG00000020968) #10	ZFYVE27 (ENSPSNG00000021039) #11	SFRP5 (ENSPSNG00000021235) #12	GOLGA7B (ENSPSNG00000021258) #13	CRTAC1 (ENSPSNG00000021304) #14	R3HCC1L (ENSPSNG00000021458) #15	LOXL4 (ENSPSNG00000021534) #16	HPS1 (ENSPSNG00000021605) #18	HPSE2 (ENSPSNG00000021752) #19	CNNM1 (ENSPSNG00000021881) #20	GOT1 (ENSPSNG00000021906) #21	NKX2-3 (ENSPSNG00000021922) #22	ENSPSNG00000021934	SLC25A28 (ENSPSNG00000021946) #23	ENTPD7 (ENSPSNG00000021961) #24	COX15 (ENSPSNG00000021978) #25	CUTC (ENSPSNG00000010192) #26	ABCC2 (ENSPSNG00000010279) #27	DNMBP (ENSPSNG00000010680) #28	ENSPSNG00000011167	CPN1 (ENSPSNG00000011204) #29	ENSPSNG00000011294	ENSPSNG00000011395	ERLIN1 (ENSPSNG00000011494) #30	CHUK (ENSPSNG00000011567) #31	CWF19L1 (ENSPSNG00000011631) #32	BLOC1S2 (ENSPSNG00000011757) #33
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00390000005254.i.a.b.d.a.a.b	ENSGT00940000157556 #22	ENSGT00950000182922.a.b.e.b	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00950000183178.b.a.kb	ENSGT00940000158235 #29	ENSGT00950000182965.b.`b.a	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33
Narwhal	MODERN SPECIES	311	AVPI1 (ENSMMNG00015020853) #9	MARVELD1 (ENSMMNG00015020866) #10	ZFYVE27 (ENSMMNG00015020926) #11	SFRP5 (ENSMMNG00015021053) #12	ENSMMNG00015021065	GOLGA7B (ENSMMNG00015021091) #13	CRTAC1 (ENSMMNG00015021140) #14	R3HCC1L (ENSMMNG00015021199) #15	LOXL4 (ENSMMNG00015021234) #16	PYROXD2 (ENSMMNG00015021259) #17	HPS1 (ENSMMNG00015021292) #18	HPSE2 (ENSMMNG00015021406) #19	CNNM1 (ENSMMNG00015021551) #20	GOT1 (ENSMMNG00015021565) #21	ENSMMNG00015021579	NKX2-3 (ENSMMNG00015021590) #22	ENSMMNG00015021602	SLC25A28 (ENSMMNG00015021609) #23	ENTPD7 (ENSMMNG00015021616) #24	COX15 (ENSMMNG00015021631) #25	CUTC (ENSMMNG00015021646) #26	ABCC2 (ENSMMNG00015021666) #27	DNMBP (ENSMMNG00015021703) #28	ENSMMNG00015021741	CPN1 (ENSMMNG00015021745) #29	ENSMMNG00015021751	ENSMMNG00015021772	ERLIN1 (ENSMMNG00015021807) #30	CHUK (ENSMMNG00015021819) #31	CWF19L1 (ENSMMNG00015021829) #32	BLOC1S2 (ENSMMNG00015021848) #33
Beluga whale	MODERN SPECIES	65	MARVELD1 (ENSDLEG00000015515) #10	ZFYVE27 (ENSDLEG00000015495) #11	SFRP5 (ENSDLEG00000015488) #12	ENSDLEG00000015480	GOLGA7B (ENSDLEG00000015445) #13	CRTAC1 (ENSDLEG00000015410) #14	R3HCC1L (ENSDLEG00000019396) #15	LOXL4 (ENSDLEG00000019384) #16	PYROXD2 (ENSDLEG00000019317) #17	HPS1 (ENSDLEG00000018728) #18	HPSE2 (ENSDLEG00000018666) #19	ENSDLEG00000018658 #19	CNNM1 (ENSDLEG00000018642) #20	GOT1 (ENSDLEG00000018631) #21	ENSDLEG00000018627	NKX2-3 (ENSDLEG00000018624) #22	ENSDLEG00000018620	SLC25A28 (ENSDLEG00000018615) #23	ENTPD7 (ENSDLEG00000018599) #24	COX15 (ENSDLEG00000018589) #25	CUTC (ENSDLEG00000018572) #26	ABCC2 (ENSDLEG00000017009) #27	ENSDLEG00000016877	DNMBP (ENSDLEG00000016839) #28	CPN1 (ENSDLEG00000016805) #29	ENSDLEG00000016781	ENSDLEG00000016762	ERLIN1 (ENSDLEG00000016752) #30	CHUK (ENSDLEG00000016724) #31	CWF19L1 (ENSDLEG00000016684) #32	BLOC1S2 (ENSDLEG00000016670) #33
Blue whale	MODERN SPECIES	7	PI4K2A (ENSBMSG00010021477) #8	AVPI1 (ENSBMSG00010021470) #9	MARVELD1 (ENSBMSG00010021463) #10	SFRP5 (ENSBMSG00010021454) #12	ENSBMSG00010021433	ZFYVE27 (ENSBMSG00010021315) #11	CRTAC1 (ENSBMSG00010021195) #14	R3HCC1L (ENSBMSG00010021112) #15	LOXL4 (ENSBMSG00010021080) #16	PYROXD2 (ENSBMSG00010021039) #17	HPS1 (ENSBMSG00010021004) #18	ENSBMSG00010020978	HPSE2 (ENSBMSG00010020945) #19	CNNM1 (ENSBMSG00010020911) #20	GOT1 (ENSBMSG00010020897) #21	NKX2-3 (ENSBMSG00010020878) #22	SLC25A28 (ENSBMSG00010020858) #23	ENTPD7 (ENSBMSG00010020812) #24	COX15 (ENSBMSG00010020776) #25	CUTC (ENSBMSG00010020742) #26	ENSBMSG00010020724 #27	ENSBMSG00010020695 #27	ENSBMSG00010020666	DNMBP (ENSBMSG00010020572) #28	CPN1 (ENSBMSG00010020507) #29	ENSBMSG00010020488	ENSBMSG00010020464	ERLIN1 (ENSBMSG00010020428) #30	CHUK (ENSBMSG00010020396) #31	CWF19L1 (ENSBMSG00010020350) #32	ENSBMSG00010020318 #33
Pecora	ANCESTRAL SPECIES	12	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889.j #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Percora_a	ANCESTRAL SPECIES	14	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889.j #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Bovidae	ANCESTRAL SPECIES	24	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889.j #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Bovinae	ANCESTRAL SPECIES	22	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889.j #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Bos	ANCESTRAL SPECIES	23	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741.d #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889.j #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Bos_a	ANCESTRAL SPECIES	17	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741.d #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889.j #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Domestic yak	MODERN SPECIES	17	AVPI1 (ENSBGRG00000018935) #9	MARVELD1 (ENSBGRG00000018953) #10	ZFYVE27 (ENSBGRG00000019044) #11	SFRP5 (ENSBGRG00000019974) #12	GOLGA7B (ENSBGRG00000020042) #13	CRTAC1 (ENSBGRG00000020315) #14	ENSBGRG00000020483 #15	ENSBGRG00000020536	LOXL4 (ENSBGRG00000020559) #16	PYROXD2 (ENSBGRG00000020702) #17	HPS1 (ENSBGRG00000020843) #18	HPSE2 (ENSBGRG00000021306) #19	ENSBGRG00000021941	CNNM1 (ENSBGRG00000021985) #20	GOT1 (ENSBGRG00000022227) #21	NKX2-3 (ENSBGRG00000022317) #22	SLC25A28 (ENSBGRG00000022344) #23	ENTPD7 (ENSBGRG00000022394) #24	COX15 (ENSBGRG00000022480) #25	CUTC (ENSBGRG00000022756) #26	ABCC2 (ENSBGRG00000022859) #27	DNMBP (ENSBGRG00000023150) #28	CPN1 (ENSBGRG00000023508) #29	ENSBGRG00000023587	ERLIN1 (ENSBGRG00000023679) #30	CHUK (ENSBGRG00000023732) #31	CWF19L1 (ENSBGRG00000023954) #32	BLOC1S2 (ENSBGRG00000024074) #33	PKD2L1 (ENSBGRG00000024114) #34	ENSBGRG00000024209	SCD (ENSBGRG00000024230) #35
Wild yak	MODERN SPECIES	459													ENSBMUG00000018304 #19	CNNM1 (ENSBMUG00000018287) #20	GOT1 (ENSBMUG00000018263) #21	NKX2-3 (ENSBMUG00000018255) #22	SLC25A28 (ENSBMUG00000018239) #23	ENTPD7 (ENSBMUG00000018228) #24	COX15 (ENSBMUG00000018209) #25	CUTC (ENSBMUG00000018195) #26	ABCC2 (ENSBMUG00000018169) #27	DNMBP (ENSBMUG00000018089) #28	CPN1 (ENSBMUG00000018051) #29	ENSBMUG00000017924	ERLIN1 (ENSBMUG00000017806) #30	CHUK (ENSBMUG00000017775) #31	CWF19L1 (ENSBMUG00000017670) #32	BLOC1S2 (ENSBMUG00000017651) #33	PKD2L1 (ENSBMUG00000017631) #34	SCD (ENSBMUG00000017541) #35
Bos_b	ANCESTRAL SPECIES	23	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741.d #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889.j #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Hybrid Bos Indicus	MODERN SPECIES	18	HOGA1 (ENSBIXG00005009628)	MORN4 (ENSBIXG00005000550) #7	AVPI1 (ENSBIXG00005009706) #9	PI4K2A (ENSBIXG00005006986) #8	SFRP5 (ENSBIXG00005009770) #12	ZFYVE27 (ENSBIXG00005000645) #11	CRTAC1 (ENSBIXG00005010075) #14	ENSBIXG00005010106	R3HCC1L (ENSBIXG00005010153) #15	LOXL4 (ENSBIXG00005010186) #16	PYROXD2 (ENSBIXG00005010212) #17	HPS1 (ENSBIXG00005000811) #18	HPSE2 (ENSBIXG00005010419) #19	CNNM1 (ENSBIXG00005006993) #20	GOT1 (ENSBIXG00005000692) #21	NKX2-3 (ENSBIXG00005010599) #22	SLC25A28 (ENSBIXG00005010613) #23	ENTPD7 (ENSBIXG00005010635) #24	COX15 (ENSBIXG00005010651) #25	CUTC (ENSBIXG00005000919) #26	ABCC2 (ENSBIXG00005000623) #27	DNMBP (ENSBIXG00005010920) #28	CPN1 (ENSBIXG00005000570) #29	ENSBIXG00005010965	ERLIN1 (ENSBIXG00005001006) #30	CHUK (ENSBIXG00005011090) #31	CWF19L1 (ENSBIXG00005001023) #32	ENSBIXG00005011167 #33	ENSBIXG00005001032	ENSBIXG00005011185	PKD2L1 (ENSBIXG00005001038) #34
Cow	MODERN SPECIES	18	AVPI1 (ENSBTAG00000023947) #9	MARVELD1 (ENSBTAG00000013478) #10	ZFYVE27 (ENSBTAG00000018564) #11	SFRP5 (ENSBTAG00000018566) #12	GOLGA7B (ENSBTAG00000008100) #13	CRTAC1 (ENSBTAG00000008102) #14	R3HCC1L (ENSBTAG00000021856) #15	LOXL4 (ENSBTAG00000020895) #16	PYROXD2 (ENSBTAG00000014313) #17	HPS1 (ENSBTAG00000014314) #18	HPSE2 (ENSBTAG00000054120) #19	ENSBTAG00000052639	ENSBTAG00000050951 #19	CNNM1 (ENSBTAG00000011956) #20	GOT1 (ENSBTAG00000011960) #21	NKX2-3 (ENSBTAG00000021397) #22	SLC25A28 (ENSBTAG00000012107) #23	ENTPD7 (ENSBTAG00000047077) #24	COX15 (ENSBTAG00000045703) #25	CUTC (ENSBTAG00000002971) #26	ABCC2 (ENSBTAG00000008936) #27	DNMBP (ENSBTAG00000008939) #28	CPN1 (ENSBTAG00000023941) #29	CYP2C23 (ENSBTAG00000023939)	ERLIN1 (ENSBTAG00000007588) #30	CHUK (ENSBTAG00000007591) #31	CWF19L1 (ENSBTAG00000007594) #32	BLOC1S2 (ENSBTAG00000010739) #33	PKD2L1 (ENSBTAG00000010742) #34	ENSBTAG00000027715	SCD (ENSBTAG00000055207) #35
American bison	MODERN SPECIES	3316													ENSBBBG00000000558 #19	CNNM1 (ENSBBBG00000000548) #20	GOT1 (ENSBBBG00000000537) #21	NKX2-3 (ENSBBBG00000000532) #22	SLC25A28 (ENSBBBG00000000522) #23	ENTPD7 (ENSBBBG00000007516) #24	COX15 (ENSBBBG00000020431) #25	CUTC (ENSBBBG00000020570) #26	ABCC2 (ENSBBBG00000020631) #27	DNMBP (ENSBBBG00000008616) #28	CPN1 (ENSBBBG00000020710) #29	ENSBBBG00000020764	ERLIN1 (ENSBBBG00000020806) #30	CHUK (ENSBBBG00000005609) #31	CWF19L1 (ENSBBBG00000020870) #32	BLOC1S2 (ENSBBBG00000006915) #33	PKD2L1 (ENSBBBG00000020976) #34	SCD (ENSBBBG00000020991) #35	WNT8B (ENSBBBG00000021008) #36
Caprinae	ANCESTRAL SPECIES	19	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889.j #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Rambouillet Sheep	MODERN SPECIES	14	MORN4 (ENSOARG00020019435) #7	PI4K2A (ENSOARG00020019502) #8	AVPI1 (ENSOARG00020019577) #9	MARVELD1 (ENSOARG00020019607) #10	ENSOARG00020019627	ZFYVE27 (ENSOARG00020019673) #11	SFRP5 (ENSOARG00020020728) #12	GOLGA7B (ENSOARG00020020851) #13	CRTAC1 (ENSOARG00020020932) #14	LOXL4 (ENSOARG00020021636) #16	PYROXD2 (ENSOARG00020021749) #17	HPS1 (ENSOARG00020021926) #18	HPSE2 (ENSOARG00020022137) #19	CNNM1 (ENSOARG00020022788) #20	GOT1 (ENSOARG00020022840) #21	NKX2-3 (ENSOARG00020022879) #22	SLC25A28 (ENSOARG00020022896) #23	ENTPD7 (ENSOARG00020022923) #24	COX15 (ENSOARG00020022953) #25	CUTC (ENSOARG00020022982) #26	ABCC2 (ENSOARG00020023009) #27	DNMBP (ENSOARG00020023124) #28	CPN1 (ENSOARG00020023321) #29	ENSOARG00020023363	ENSOARG00020023442	ERLIN1 (ENSOARG00020023462) #30	CHUK (ENSOARG00020023504) #31	CWF19L1 (ENSOARG00020023576) #32	ENSOARG00020023608 #33	PKD2L1 (ENSOARG00020023638) #34	SCD (ENSOARG00020023857) #35
Goat	MODERN SPECIES	18	MORN4 (ENSCHIG00000015248) #7	PI4K2A (ENSCHIG00000019481) #8	AVPI1 (ENSCHIG00000014474) #9	MARVELD1 (ENSCHIG00000019321) #10	ZFYVE27 (ENSCHIG00000015749) #11	SFRP5 (ENSCHIG00000024678) #12	GOLGA7B (ENSCHIG00000020686) #13	CRTAC1 (ENSCHIG00000021520) #14	R3HCC1L (ENSCHIG00000015278) #15	LOXL4 (ENSCHIG00000023220) #16	PYROXD2 (ENSCHIG00000012022) #17	HPS1 (ENSCHIG00000015465) #18	HPSE2 (ENSCHIG00000007017) #19	CNNM1 (ENSCHIG00000021440) #20	GOT1 (ENSCHIG00000024327) #21	NKX2-3 (ENSCHIG00000017672) #22	SLC25A28 (ENSCHIG00000012444) #23	ENTPD7 (ENSCHIG00000010544) #24	COX15 (ENSCHIG00000020850) #25	CUTC (ENSCHIG00000003099) #26	ABCC2 (ENSCHIG00000023862) #27	DNMBP (ENSCHIG00000012404) #28	CPN1 (ENSCHIG00000006379) #29	ENSCHIG00000002220	ENSCHIG00000024200	ERLIN1 (ENSCHIG00000021174) #30	CHUK (ENSCHIG00000017053) #31	CWF19L1 (ENSCHIG00000022368) #32	BLOC1S2 (ENSCHIG00000012162) #33	PKD2L1 (ENSCHIG00000011550) #34	SCD (ENSCHIG00000021254) #35
Siberian musk deer	MODERN SPECIES	1162													ENSMMSG00000019749 #19	CNNM1 (ENSMMSG00000019701) #20	GOT1 (ENSMMSG00000019669) #21	NKX2-3 (ENSMMSG00000019646) #22	SLC25A28 (ENSMMSG00000019614) #23	ENTPD7 (ENSMMSG00000019589) #24	COX15 (ENSMMSG00000019557) #25	CUTC (ENSMMSG00000019530) #26	ABCC2 (ENSMMSG00000019363) #27	DNMBP (ENSMMSG00000019235) #28	CPN1 (ENSMMSG00000019165) #29	ENSMMSG00000019076	ERLIN1 (ENSMMSG00000018996) #30	ENSMMSG00000018864 #31	CWF19L1 (ENSMMSG00000018813) #32	ENSMMSG00000018776 #33	PKD2L1 (ENSMMSG00000018586) #34	SCD (ENSMMSG00000018540) #35	WNT8B (ENSMMSG00000018493) #36
Yarkand deer	MODERN SPECIES	6	PI4K2A (ENSCHYG00000021371) #8	AVPI1 (ENSCHYG00000004424) #9	MARVELD1 (ENSCHYG00000004459) #10	ZFYVE27 (ENSCHYG00000004712) #11	SFRP5 (ENSCHYG00000004868) #12	ENSCHYG00000004880	CRTAC1 (ENSCHYG00000004903) #14	R3HCC1L (ENSCHYG00000004994) #15	LOXL4 (ENSCHYG00000005041) #16	ENSCHYG00000005075	PYROXD2 (ENSCHYG00000005123) #17	HPS1 (ENSCHYG00000005361) #18	HPSE2 (ENSCHYG00000005569) #19	CNNM1 (ENSCHYG00000005721) #20	ENSCHYG00000005946 #21	NKX2-3 (ENSCHYG00000005991) #22	SLC25A28 (ENSCHYG00000006008) #23	ENTPD7 (ENSCHYG00000006056) #24	COX15 (ENSCHYG00000006179) #25	CUTC (ENSCHYG00000006242) #26	ENSCHYG00000006294	ABCC2 (ENSCHYG00000006324) #27	DNMBP (ENSCHYG00000006445) #28	CPN1 (ENSCHYG00000006610) #29	ENSCHYG00000006656	ERLIN1 (ENSCHYG00000006724) #30	CHUK (ENSCHYG00000006784) #31	ENSCHYG00000006832	CWF19L1 (ENSCHYG00000006851) #32	BLOC1S2 (ENSCHYG00000006943) #33	PKD2L1 (ENSCHYG00000006976) #34
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Carnivora	ANCESTRAL SPECIES	16	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Caniformia	ANCESTRAL SPECIES	13	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Canidae	ANCESTRAL SPECIES	16	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872.b #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872.b #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049.i #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000162741.j.l.b.b	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Dog	MODERN SPECIES	20	PI4K2A (ENSCAFG00845029994) #8	ENSCAFG00845030048 #9	MARVELD1 (ENSCAFG00845030060) #10	ZFYVE27 (ENSCAFG00845030149) #11	SFRP5 (ENSCAFG00845030226) #12	CRTAC1 (ENSCAFG00845030290) #14	GOLGA7B (ENSCAFG00845030415) #13	R3HCC1L (ENSCAFG00845030456) #15	LOXL4 (ENSCAFG00845030491) #16	PYROXD2 (ENSCAFG00845030554) #17	ENSCAFG00845030609	HPS1 (ENSCAFG00845030620) #18	HPSE2 (ENSCAFG00845030674) #19	CNNM1 (ENSCAFG00845030755) #20	GOT1 (ENSCAFG00845030772) #21	NKX2-3 (ENSCAFG00845030787) #22	SLC25A28 (ENSCAFG00845030792) #23	ENTPD7 (ENSCAFG00845030797) #24	COX15 (ENSCAFG00845030808) #25	CUTC (ENSCAFG00845030834) #26	ENSCAFG00845030866	ABCC2 (ENSCAFG00845030901) #27	DNMBP (ENSCAFG00845030948) #28	ENSCAFG00845016095	CPN1 (ENSCAFG00845016127) #29	ERLIN1 (ENSCAFG00845016181) #30	CHUK (ENSCAFG00845016257) #31	CWF19L1 (ENSCAFG00845016322) #32	BLOC1S2 (ENSCAFG00845016389) #33	PKD2L1 (ENSCAFG00845016477) #34	SCD (ENSCAFG00845016649) #35
Dingo	MODERN SPECIES	165	PI4K2A (ENSCAFG00020006060) #8	ENSCAFG00020006100 #9	MARVELD1 (ENSCAFG00020006102) #10	ZFYVE27 (ENSCAFG00020006105) #11	SFRP5 (ENSCAFG00020006107) #12	GOLGA7B (ENSCAFG00020006112) #13	CRTAC1 (ENSCAFG00020006114) #14	R3HCC1L (ENSCAFG00020006245) #15	LOXL4 (ENSCAFG00020006249) #16	PYROXD2 (ENSCAFG00020006321) #17	HPS1 (ENSCAFG00020006365) #18	HPSE2 (ENSCAFG00020007338) #19	ENSCAFG00020007369 #19	CNNM1 (ENSCAFG00020007396) #20	GOT1 (ENSCAFG00020007440) #21	NKX2-3 (ENSCAFG00020007443) #22	SLC25A28 (ENSCAFG00020007452) #23	ENTPD7 (ENSCAFG00020007458) #24	COX15 (ENSCAFG00020007471) #25	CUTC (ENSCAFG00020007478) #26	ENSCAFG00020007494	ABCC2 (ENSCAFG00020007504) #27	DNMBP (ENSCAFG00020007574) #28	ENSCAFG00020007576	CPN1 (ENSCAFG00020007578) #29	ERLIN1 (ENSCAFG00020007585) #30	CHUK (ENSCAFG00020007624) #31	CWF19L1 (ENSCAFG00020008275) #32	BLOC1S2 (ENSCAFG00020008279) #33	PKD2L1 (ENSCAFG00020008288) #34	SCD (ENSCAFG00020008320) #35
Red fox	MODERN SPECIES		MORN4 (ENSVVUG00000023247) #7	PI4K2A (ENSVVUG00000023252) #8	AVPI1 (ENSVVUG00000023255) #9	MARVELD1 (ENSVVUG00000023256) #10	ZFYVE27 (ENSVVUG00000023261) #11	SFRP5 (ENSVVUG00000023267) #12	CRTAC1 (ENSVVUG00000023277) #14	R3HCC1L (ENSVVUG00000023317) #15	LOXL4 (ENSVVUG00000023322) #16	PYROXD2 (ENSVVUG00000023335) #17	HPS1 (ENSVVUG00000023341) #18	HPSE2 (ENSVVUG00000023366) #19	ENSVVUG00000023377 #19	CNNM1 (ENSVVUG00000023380) #20	GOT1 (ENSVVUG00000023396) #21	NKX2-3 (ENSVVUG00000023404) #22	SLC25A28 (ENSVVUG00000023405) #23	ENTPD7 (ENSVVUG00000023409) #24	COX15 (ENSVVUG00000023414) #25	CUTC (ENSVVUG00000023417) #26	ENSVVUG00000023442	ABCC2 (ENSVVUG00000023522) #27	DNMBP (ENSVVUG00000024611) #28	ENSVVUG00000024832	CPN1 (ENSVVUG00000024833) #29	ENSVVUG00000024837	ERLIN1 (ENSVVUG00000024839) #30	CHUK (ENSVVUG00000024844) #31	CWF19L1 (ENSVVUG00000024848) #32	BLOC1S2 (ENSVVUG00000024915) #33	PKD2L1 (ENSVVUG00000024919) #34
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a.b #37
Mustelinae	ANCESTRAL SPECIES	29	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a.b #37
American mink	MODERN SPECIES	25	PI4K2A (ENSNVIG00000020017) #8	AVPI1 (ENSNVIG00000019986) #9	MARVELD1 (ENSNVIG00000019972) #10	ZFYVE27 (ENSNVIG00000019905) #11	SFRP5 (ENSNVIG00000019893) #12	GOLGA7B (ENSNVIG00000019876) #13	CRTAC1 (ENSNVIG00000019780) #14	R3HCC1L (ENSNVIG00000019732) #15	LOXL4 (ENSNVIG00000019721) #16	PYROXD2 (ENSNVIG00000019708) #17	HPS1 (ENSNVIG00000019617) #18	ENSNVIG00000019609	HPSE2 (ENSNVIG00000019528) #19	CNNM1 (ENSNVIG00000019501) #20	GOT1 (ENSNVIG00000019493) #21	NKX2-3 (ENSNVIG00000019485) #22	SLC25A28 (ENSNVIG00000019475) #23	ENTP7 (ENSNVIG00000019452) #24	COX15 (ENSNVIG00000019404) #25	CUTC (ENSNVIG00000019369) #26	ENSNVIG00000019358	ABCC2 (ENSNVIG00000019248) #27	DNMBP (ENSNVIG00000019147) #28	CPN1 (ENSNVIG00000019110) #29	ERLIN1 (ENSNVIG00000019050) #30	CHUK (ENSNVIG00000019034) #31	CWF19L1 (ENSNVIG00000019007) #32	BLOC1S2 (ENSNVIG00000018993) #33	PKD2L1 (ENSNVIG00000018963) #34	SCD (ENSNVIG00000018947) #35	WNT8B (ENSNVIG00000018933) #36
Ferret	MODERN SPECIES	187	AVPI1 (ENSMPUG00000017034) #9	SFRP5 (ENSMPUG00000017033) #12	ZFYVE27 (ENSMPUG00000017032) #11	ENSMPUG00000017031	GOLGA7B (ENSMPUG00000017027) #13	CRTAC1 (ENSMPUG00000017026) #14	R3HCC1L (ENSMPUG00000017025) #15	LOXL4 (ENSMPUG00000017023) #16	PYROXD2 (ENSMPUG00000017020) #17	HPS1 (ENSMPUG00000017000) #18	HPSE2 (ENSMPUG00000016999) #19	ENSMPUG00000016998 #19	CNNM1 (ENSMPUG00000016997) #20	GOT1 (ENSMPUG00000016996) #21	ENSMPUG00000016995	NKX2-3 (ENSMPUG00000016992) #22	ENSMPUG00000016991	SLC25A28 (ENSMPUG00000016989) #23	ENTPD7 (ENSMPUG00000016988) #24	COX15 (ENSMPUG00000016987) #25	CUTC (ENSMPUG00000016986) #26	ABCC2 (ENSMPUG00000016985) #27	DNMBP (ENSMPUG00000016984) #28	CPN1 (ENSMPUG00000016982) #29	ERLIN1 (ENSMPUG00000016979) #30	CHUK (ENSMPUG00000016978) #31	CWF19L1 (ENSMPUG00000016977) #32	BLOC1S2 (ENSMPUG00000016975) #33	ENSMPUG00000016974	PKD2L1 (ENSMPUG00000016963) #34	SCD (ENSMPUG00000016962) #35
Ursidae	ANCESTRAL SPECIES	5	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00390000015060.e.b.a	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.d #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a.b #37
Giant Panda	MODERN SPECIES	16	PI4K2A (ENSAMEG00000000097) #8	ENSAMEG00000000096 #9	MARVELD1 (ENSAMEG00000000095) #10	ZFYVE27 (ENSAMEG00000000090) #11	SFRP5 (ENSAMEG00000000089) #12	CRTAC1 (ENSAMEG00000000081) #14	GOLGA7B (ENSAMEG00000000088) #13	R3HCC1L (ENSAMEG00000000078) #15	LOXL4 (ENSAMEG00000000074) #16	PYROXD2 (ENSAMEG00000000072) #17	HPS1 (ENSAMEG00000000061) #18	HPSE2 (ENSAMEG00000000060) #19	ENSAMEG00000030373	CNNM1 (ENSAMEG00000025498) #20	GOT1 (ENSAMEG00000003623) #21	NKX2-3 (ENSAMEG00000029439) #22	SLC25A28 (ENSAMEG00000007268) #23	ENTPD7 (ENSAMEG00000007233) #24	COX15 (ENSAMEG00000007219) #25	CUTC (ENSAMEG00000007211) #26	ABCC2 (ENSAMEG00000007018) #27	ENSAMEG00000024466	DNMBP (ENSAMEG00000006999) #28	ENSAMEG00000029309	ENSAMEG00000006951 #30	CHUK (ENSAMEG00000006839) #31	CWF19L1 (ENSAMEG00000006811) #32	BLOC1S2 (ENSAMEG00000006802) #33	PKD2L1 (ENSAMEG00000006758) #34	SCD (ENSAMEG00000006735) #35	WNT8B (ENSAMEG00000030678) #36
Ursus	ANCESTRAL SPECIES	7	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00390000015060.e.b.a	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908.d #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a.b #37
American black bear	MODERN SPECIES	953														ENSUAMG00000024193 #20	GOT1 (ENSUAMG00000024194) #21	NKX2-3 (ENSUAMG00000024195) #22	SLC25A28 (ENSUAMG00000024196) #23	ENTPD7 (ENSUAMG00000024199) #24	COX15 (ENSUAMG00000024200) #25	CUTC (ENSUAMG00000024201) #26	ABCC2 (ENSUAMG00000024202) #27	ENSUAMG00000024203	DNMBP (ENSUAMG00000024205) #28
Felidae	ANCESTRAL SPECIES	14	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Panthera	ANCESTRAL SPECIES	8	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36	ENSGT00390000003175.a.a #37
lion	MODERN SPECIES	11	MORN4 (ENSPLOG00000007986) #7	PI4K2A (ENSPLOG00000007948) #8	AVPI1 (ENSPLOG00000007926) #9	MARVELD1 (ENSPLOG00000007915) #10	ZFYVE27 (ENSPLOG00000007744) #11	SFRP5 (ENSPLOG00000007685) #12	GOLGA7B (ENSPLOG00000007655) #13	CRTAC1 (ENSPLOG00000007504) #14	R3HCC1L (ENSPLOG00000007438) #15	LOXL4 (ENSPLOG00000007390) #16	PYROXD2 (ENSPLOG00000007348) #17	HPS1 (ENSPLOG00000007321) #18	HPSE2 (ENSPLOG00000007079) #19	CNNM1 (ENSPLOG00000006934) #20	GOT1 (ENSPLOG00000006894) #21	NKX2-3 (ENSPLOG00000006875) #22	SLC25A28 (ENSPLOG00000006856) #23	ENTPD7 (ENSPLOG00000006821) #24	COX15 (ENSPLOG00000006773) #25	CUTC (ENSPLOG00000006732) #26	ABCC2 (ENSPLOG00000006642) #27	DNMBP (ENSPLOG00000006463) #28	CPN1 (ENSPLOG00000006378) #29	ERLIN1 (ENSPLOG00000006354) #30	CHUK (ENSPLOG00000006290) #31	CWF19L1 (ENSPLOG00000006219) #32	BLOC1S2 (ENSPLOG00000006186) #33	PKD2L1 (ENSPLOG00000006098) #34	SCD (ENSPLOG00000006063) #35	WNT8B (ENSPLOG00000006038) #36	SEC31B (ENSPLOG00000006003) #37
leopard	MODERN SPECIES	33	MORN4 (ENSPPRG00000008387) #7	PI4K2A (ENSPPRG00000007831) #8	AVPI1 (ENSPPRG00000007713) #9	MARVELD1 (ENSPPRG00000021353) #10	ZFYVE27 (ENSPPRG00000006534) #11	SFRP5 (ENSPPRG00000004042) #12	GOLGA7B (ENSPPRG00000003605) #13	CRTAC1 (ENSPPRG00000003319) #14	ENSPPRG00000002263 #15	LOXL4 (ENSPPRG00000001920) #16	PYROXD2 (ENSPPRG00000001210) #17	HPS1 (ENSPPRG00000000907) #18	HPSE2 (ENSPPRG00000000250) #19	CNNM1 (ENSPPRG00000024142) #20	GOT1 (ENSPPRG00000024393) #21	NKX2-3 (ENSPPRG00000024447) #22	SLC25A28 (ENSPPRG00000024601) #23	ENTPD7 (ENSPPRG00000024664) #24	COX15 (ENSPPRG00000018767) #25	CUTC (ENSPPRG00000016037) #26	ABCC2 (ENSPPRG00000010266) #27	DNMBP (ENSPPRG00000009541) #28	CPN1 (ENSPPRG00000008460) #29	ERLIN1 (ENSPPRG00000006192) #30	CHUK (ENSPPRG00000005992) #31	CWF19L1 (ENSPPRG00000005516) #32	BLOC1S2 (ENSPPRG00000005194) #33	PKD2L1 (ENSPPRG00000003539) #34	SCD (ENSPPRG00000001976) #35	WNT8B (ENSPPRG00000001818) #36	SEC31B (ENSPPRG00000001132) #37
Tiger	MODERN SPECIES	136	HOGA1 (ENSPTIG00000014480)	C10orf62 (ENSPTIG00000015070)	MORN4 (ENSPTIG00000015742) #7	PI4K2A (ENSPTIG00000016813) #8	AVPI1 (ENSPTIG00000017197) #9	ZFYVE27 (ENSPTIG00000018038) #11	GOLGA7B (ENSPTIG00000020956) #13	CRTAC1 (ENSPTIG00000021313) #14	ENSPTIG00000005720 #15	LOXL4 (ENSPTIG00000006871) #16	PYROXD2 (ENSPTIG00000007293) #17	HPS1 (ENSPTIG00000008067) #18	HPSE2 (ENSPTIG00000013671) #19	CNNM1 (ENSPTIG00000018523) #20	GOT1 (ENSPTIG00000020444) #21	NKX2-3 (ENSPTIG00000020694) #22	SLC25A28 (ENSPTIG00000020921) #23	ENTPD7 (ENSPTIG00000021486) #24	COX15 (ENSPTIG00000021530) #25	CUTC (ENSPTIG00000021839) #26	ABCC2 (ENSPTIG00000021926) #27	DNMBP (ENSPTIG00000000911) #28	CPN1 (ENSPTIG00000006187) #29	ERLIN1 (ENSPTIG00000006952) #30	CHUK (ENSPTIG00000007746) #31	CWF19L1 (ENSPTIG00000009695) #32	BLOC1S2 (ENSPTIG00000010062) #33	PKD2L1 (ENSPTIG00000011355) #34	SCD (ENSPTIG00000012317) #35	SEC31B (ENSPTIG00000012634) #37	NDUFB8 (ENSPTIG00000013500)
Cat	MODERN SPECIES	242	HOGA1 (ENSFCAG00000024587)	MORN4 (ENSFCAG00000028227) #7	PI4K2A (ENSFCAG00000013431) #8	AVPI1 (ENSFCAG00000027156) #9	MARVELD1 (ENSFCAG00000041291) #10	ZFYVE27 (ENSFCAG00000013433) #11	SFRP5 (ENSFCAG00000038195) #12	CRTAC1 (ENSFCAG00000013435) #14	R3HCC1L (ENSFCAG00000030301) #15	LOXL4 (ENSFCAG00000009345) #16	PYROXD2 (ENSFCAG00000009346) #17	HPS1 (ENSFCAG00000009348) #18	HPSE2 (ENSFCAG00000046015) #19	CNNM1 (ENSFCAG00000014375) #20	GOT1 (ENSFCAG00000028066) #21	NKX2-3 (ENSFCAG00000042789) #22	SLC25A28 (ENSFCAG00000045981) #23	ENTPD7 (ENSFCAG00000014376) #24	COX15 (ENSFCAG00000014378) #25	ABCC2 (ENSFCAG00000014380) #27	DNMBP (ENSFCAG00000014383) #28	ERLIN1 (ENSFCAG00000029825) #29	CHUK (ENSFCAG00000004930) #31	CWF19L1 (ENSFCAG00000010585) #32	BLOC1S2 (ENSFCAG00000032495) #33	PKD2L1 (ENSFCAG00000006445) #34	SCD (ENSFCAG00000031590) #35	WNT8B (ENSFCAG00000006451) #36	SEC31B (ENSFCAG00000006452) #37	NDUFB8 (ENSFCAG00000041098)	HIF1AN (ENSFCAG00000024883)
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Equus	ANCESTRAL SPECIES	9	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Horse	MODERN SPECIES		AVPI1 (ENSECAG00000008293) #9	MARVELD1 (ENSECAG00000035735) #10	ZFYVE27 (ENSECAG00000008070) #11	SFRP5 (ENSECAG00000026876) #12	GOLGA7B (ENSECAG00000007985) #13	CRTAC1 (ENSECAG00000007097) #14	LOXL4 (ENSECAG00000005573) #16	R3HCC1L (ENSECAG00000006861) #15	PYROXD2 (ENSECAG00000003748) #17	HPS1 (ENSECAG00000000393) #18	ENSECAG00000058422	ENSECAG00000009538	HPSE2 (ENSECAG00000000353) #19	CNNM1 (ENSECAG00000000257) #20	GOT1 (ENSECAG00000000095) #21	NKX2-3 (ENSECAG00000000092) #22	SLC25A28 (ENSECAG00000009356) #23	ENTPD7 (ENSECAG00000020147) #24	COX15 (ENSECAG00000014039) #25	CUTC (ENSECAG00000006891) #26	ABCC2 (ENSECAG00000019828) #27	DNMBP (ENSECAG00000010813) #28	CPN1 (ENSECAG00000024087) #29	ENSECAG00000049976	CYP2C23 (ENSECAG00000024865)	ERLIN1 (ENSECAG00000043715) #30	CHUK (ENSECAG00000006588) #31	CWF19L1 (ENSECAG00000016333) #32	BLOC1S2 (ENSECAG00000013421) #33	PKD2L1 (ENSECAG00000023606) #34	SCD (ENSECAG00000014658) #35
Donkey	MODERN SPECIES	11	PI4K2A (ENSEASG00005008665) #8	AVPI1 (ENSEASG00005008664) #9	MARVELD1 (ENSEASG00005008661) #10	ZFYVE27 (ENSEASG00005008657) #11	SFRP5 (ENSEASG00005027560) #12	GOLGA7B (ENSEASG00005008652) #13	CRTAC1 (ENSEASG00005008642) #14	R3HCC1L (ENSEASG00005008634) #15	LOXL4 (ENSEASG00005008627) #16	PYROXD2 (ENSEASG00005008622) #17	HPS1 (ENSEASG00005008377) #18	ENSEASG00005007924	HPSE2 (ENSEASG00005008341) #19	CNNM1 (ENSEASG00005010116) #20	GOT1 (ENSEASG00005010111) #21	NKX2-3 (ENSEASG00005010109) #22	ENSEASG00005010107	SLC25A28 (ENSEASG00005036136) #23	ENTPD7 (ENSEASG00005010015) #24	COX15 (ENSEASG00005010011) #25	CUTC (ENSEASG00005010008) #26	ABCC2 (ENSEASG00005009680) #27	DNMBP (ENSEASG00005009614) #28	CPN1 (ENSEASG00005009613) #29	ENSEASG00005009611	ENSEASG00005026076	ERLIN1 (ENSEASG00005009396) #30	CHUK (ENSEASG00005009284) #31	CWF19L1 (ENSEASG00005009032) #32	BLOC1S2 (ENSEASG00005035216) #33	PKD2L1 (ENSEASG00005008999) #34
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Megabat	MODERN SPECIES	193														CNNM1 (ENSPVAG00000008889) #20	GOT1 (ENSPVAG00000008890) #21	NKX2-3 (ENSPVAG00000008891) #22
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Greater horseshoe bat	MODERN SPECIES	7	PI4K2A (ENSRFEG00010011240) #8	AVPI1 (ENSRFEG00010011224) #9	MARVELD1 (ENSRFEG00010011202) #10	ZFYVE27 (ENSRFEG00010010662) #11	SFRP5 (ENSRFEG00010010565) #12	GOLGA7B (ENSRFEG00010010476) #13	ENSRFEG00010010438	CRTAC1 (ENSRFEG00010010283) #14	R3HCC1L (ENSRFEG00010010169) #15	LOXL4 (ENSRFEG00010010101) #16	PYROXD2 (ENSRFEG00010009945) #17	HPS1 (ENSRFEG00010009844) #18	HPSE2 (ENSRFEG00010009250) #19	CNNM1 (ENSRFEG00010009120) #20	GOT1 (ENSRFEG00010009053) #21	NKX2-3 (ENSRFEG00010009017) #22	SLC25A28 (ENSRFEG00010008966) #23	ENSRFEG00010008955	ENTPD7 (ENSRFEG00010008932) #24	COX15 (ENSRFEG00010008880) #25	CUTC (ENSRFEG00010008821) #26	ABCC2 (ENSRFEG00010008701) #27	DNMBP (ENSRFEG00010008477) #28	CPN1 (ENSRFEG00010008391) #29	ENSRFEG00010008364	ERLIN1 (ENSRFEG00010008321) #30	CHUK (ENSRFEG00010008270) #31	CWF19L1 (ENSRFEG00010008209) #32	BLOC1S2 (ENSRFEG00010008151) #33	PKD2L1 (ENSRFEG00010008124) #34	SCD (ENSRFEG00010008107) #35
Microbat	MODERN SPECIES	1003	AVPI1 (ENSMLUG00000028157) #9	ZFYVE27 (ENSMLUG00000009377) #11	SFRP5 (ENSMLUG00000025702) #12	GOLGA7B (ENSMLUG00000015977) #13	CRTAC1 (ENSMLUG00000015981) #14	ENSMLUG00000023911	R3HCC1L (ENSMLUG00000000430) #15	LOXL4 (ENSMLUG00000000434) #16	PYROXD2 (ENSMLUG00000007227) #17	HPS1 (ENSMLUG00000007252) #18	ENSMLUG00000007280 #19	ENSMLUG00000007302	ENSMLUG00000026702 #19	CNNM1 (ENSMLUG00000007307) #20	GOT1 (ENSMLUG00000007333) #21	NKX2-3 (ENSMLUG00000012413) #22	SLC25A28 (ENSMLUG00000003248) #23	ENTPD7 (ENSMLUG00000012990) #24	COX15 (ENSMLUG00000012997) #25	CUTC (ENSMLUG00000013004) #26	ENSMLUG00000023141	ENSMLUG00000010337	ABCC2 (ENSMLUG00000013008) #27	DNMBP (ENSMLUG00000012676) #28
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Xenarthra	ANCESTRAL SPECIES	825															ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26
Armadillo	MODERN SPECIES	2387															GOT1 (ENSDNOG00000033715) #21	NKX2-3 (ENSDNOG00000040342) #22	SLC25A28 (ENSDNOG00000045994) #23	ENTPD7 (ENSDNOG00000000852) #24	COX15 (ENSDNOG00000000855) #25	CUTC (ENSDNOG00000015690) #26	ENSDNOG00000033119
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00390000015820	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Tenrec	MODERN SPECIES	17266																NKX2-3 (ENSETEG00000006626) #22
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00390000015820	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402	ENSGT00390000014666.b #30	ENSGT00950000182937.A.a #31	ENSGT00940000156000 #32	ENSGT00390000005889 #33	ENSGT00940000157274 #34	ENSGT00940000154908 #35	ENSGT00940000160584 #36
Hyrax	MODERN SPECIES	8027																NKX2-3 (ENSPCAG00000012779) #22
Elephant	MODERN SPECIES	3	HOGA1 (ENSLAFG00000010660)	MORN4 (ENSLAFG00000022767) #7	PI4K2A (ENSLAFG00000010665) #8	AVPI1 (ENSLAFG00000022434) #9	ZFYVE27 (ENSLAFG00000013655) #11	SFRP5 (ENSLAFG00000013658) #12	GOLGA7B (ENSLAFG00000003367) #13	CRTAC1 (ENSLAFG00000003369) #14	R3HCC1L (ENSLAFG00000001419) #15	LOXL4 (ENSLAFG00000001421) #16	PYROXD2 (ENSLAFG00000000434) #17	HPS1 (ENSLAFG00000000437) #18	HPSE2 (ENSLAFG00000015101) #19	CNNM1 (ENSLAFG00000000165) #20	GOT1 (ENSLAFG00000000163) #21	NKX2-3 (ENSLAFG00000014664) #22	SLC25A28 (ENSLAFG00000005821) #23	ENTPD7 (ENSLAFG00000005933) #24	COX15 (ENSLAFG00000005937) #25	CUTC (ENSLAFG00000005938) #26	ABCC2 (ENSLAFG00000014342) #27	DNMBP (ENSLAFG00000030951) #28	CPN1 (ENSLAFG00000009332) #29	ENSLAFG00000021818	ERLIN1 (ENSLAFG00000020642) #30	CHUK (ENSLAFG00000014964) #31	CWF19L1 (ENSLAFG00000014975) #32	BLOC1S2 (ENSLAFG00000014979) #33	PKD2L1 (ENSLAFG00000014984) #34	SCD (ENSLAFG00000017790) #35	WNT8B (ENSLAFG00000016592) #36
Marsupialia	ANCESTRAL SPECIES		ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT01000000220768	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402.b.b	ENSGT00940000170293	ENSGT00390000000786	ENSGT00390000000854.c.b	ENSGT00390000003133	ENSGT00940000160819	ENSGT00570000079168.b.a	ENSGT01030000234528.A.a.b
Opossum	DUPLICATION
Opossum	MODERN SPECIES		MARVELD1 (ENSMODG00000003911) #10	ZFYVE27 (ENSMODG00000003907) #11	SFRP5 (ENSMODG00000003859) #12	GOLGA7B (ENSMODG00000028192) #13	CRTAC1 (ENSMODG00000003807) #14	ENSMODG00000050795	ENSMODG00000003748 #15	ENSMODG00000039006 #15	LOXL4 (ENSMODG00000003726) #16	ENSMODG00000003692 #17	HPS1 (ENSMODG00000003664) #18	ENSMODG00000003602 #19	ENSMODG00000028699 #19	CNNM1 (ENSMODG00000003576) #20	GOT1 (ENSMODG00000003558) #21	NKX2-3 (ENSMODG00000043640) #22	SLC25A28 (ENSMODG00000003519) #23	ENTPD7 (ENSMODG00000003505) #24	COX15 (ENSMODG00000003487) #25	CUTC (ENSMODG00000048417) #26	ENSMODG00000003389 #27	DNMBP (ENSMODG00000003273) #28	CPN1 (ENSMODG00000003251) #29	ENSMODG00000002772	ENSMODG00000002759	ENSMODG00000002756	SHLD2 (ENSMODG00000002724)	ENSMODG00000002716	ENSMODG00000002697	ENSMODG00000002691	NCOA4 (ENSMODG00000002682)
Opossum	MODERN SPECIES		ENSMODG00000016680	BNIP3L (ENSMODG00000016685)	ENSMODG00000043642	PPP2R2A (ENSMODG00000016691)	EBF2 (ENSMODG00000016702)	ENSMODG00000016706	KCTD9 (ENSMODG00000016711)	DOCK5 (ENSMODG00000016721)	NEFL (ENSMODG00000016731)	ENSMODG00000016740	ENSMODG00000016755	ADAMDEC1 (ENSMODG00000016762)	ADAM28 (ENSMODG00000016767)	ENSMODG00000042259	STC1 (ENSMODG00000016782)	ENSMODG00000016788 #22	NKX3-1 (ENSMODG00000016789)	ENSMODG00000016791	ENSMODG00000038949	ENTPD4 (ENSMODG00000016799) ##24	LOXL2 (ENSMODG00000016806)	ENSMODG00000016809 ##15	ENSMODG00000016810	ENSMODG00000038901	ENSMODG00000016814	ENSMODG00000023035	ENSMODG00000016846	ENSMODG00000016852	ENSMODG00000016866	ENSMODG00000016898	ENSMODG00000016878
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT01000000220768	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT01020000233779	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000163402.b.b	ENSGT00940000170293	ENSGT00390000000786	ENSGT00390000000854.c.b	ENSGT00390000003133	ENSGT00940000160819	ENSGT00570000079168.b.a	ENSGT01030000234528.A.a.b
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT01000000220768	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT01020000233779	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000170293	ENSGT00390000000786	ENSGT00390000000854.c.b	ENSGT00390000003133	ENSGT00940000160819	ENSGT00570000079168.b.a	ENSGT01030000234528.A.a.b	ENSGT00390000008403
Wallaby	MODERN SPECIES	11615																NKX2-3 (ENSMEUG00000012911) #22
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT01000000220768	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT01020000233779	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000161741 #27	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT00940000170293	ENSGT00390000000786	ENSGT00390000000854.c.b	ENSGT00390000003133	ENSGT00940000160819	ENSGT00570000079168.b.a	ENSGT01030000234528.A.a.b	ENSGT00390000008403
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	39	AVPI1 (ENSVURG00010016980) #9	MARVELD1 (ENSVURG00010016976) #10	ZFYVE27 (ENSVURG00010016841) #11	SFRP5 (ENSVURG00010016815) #12	GOLGA7B (ENSVURG00010016801) #13	CRTAC1 (ENSVURG00010016779) #14	ENSVURG00010016755 #15	LOXL4 (ENSVURG00010016749) #16	ENSVURG00010016743	PYROXD2 (ENSVURG00010016717) #17	HPS1 (ENSVURG00010016677) #18	ENSVURG00010016657 #19	ENSVURG00010016643 #19	CNNM1 (ENSVURG00010016618) #20	GOT1 (ENSVURG00010016606) #21	NKX2-3 (ENSVURG00010016593) #22	SLC25A28 (ENSVURG00010016582) #23	ENTPD7 (ENSVURG00010016570) #24	COX15 (ENSVURG00010016544) #25	CUTC (ENSVURG00010016519) #26	ENSVURG00010016480 #27	DNMBP (ENSVURG00010016403) #28	CPN1 (ENSVURG00010016373) #29	ENSVURG00010016364	ADIRF (ENSVURG00010016356)	ENSVURG00010016343	ENSVURG00010016326	SHLD2 (ENSVURG00010016292)	ENSVURG00010016268	ENSVURG00010016262	NCOA4 (ENSVURG00010016254)
Common wonbat	MODERN SPECIES	1069	DPYSL2 (ENSVURG00010001742)	BNIP3L (ENSVURG00010001709)	ENSVURG00010001698	ENSVURG00010001676	EBF2 (ENSVURG00010001624)	ENSVURG00010001573	KCTD9 (ENSVURG00010001552)	GNRH1 (ENSVURG00010001537)	DOCK5 (ENSVURG00010001437)	NEFL (ENSVURG00010001385)	ENSVURG00010001289	ENSVURG00010001245	ADAM28 (ENSVURG00010001006)	ENSVURG00010000961	STC1 (ENSVURG00010000938)	ENSVURG00010000932 #22	SLC25A37 (ENSVURG00010000911)	ENTPD4 (ENSVURG00010000898) ##24	LOXL2 (ENSVURG00010000862)	R3HCC1 (ENSVURG00010000849) ##15	ENSVURG00010000836	ENSVURG00010000822	ENSVURG00010000817	ENSVURG00010000809	ENSVURG00010000802	ENSVURG00010000785	ENSVURG00010000769	ENSVURG00010000758	ENSVURG00010000745	ENSVURG00010000739	ENSVURG00010000714
koala	DUPLICATION
koala	MODERN SPECIES	65	MARVELD1 (ENSPCIG00000002363) #10	ZFYVE27 (ENSPCIG00000002380) #11	SFRP5 (ENSPCIG00000034993) #12	GOLGA7B (ENSPCIG00000036348) #13	CRTAC1 (ENSPCIG00000021225) #14	ENSPCIG00000021252	ENSPCIG00000035873 #15	LOXL4 (ENSPCIG00000021256) #16	ENSPCIG00000021258	PYROXD2 (ENSPCIG00000021262) #17	HPS1 (ENSPCIG00000021283) #18	ENSPCIG00000035242 #19	ENSPCIG00000028264 #19	CNNM1 (ENSPCIG00000028265) #20	GOT1 (ENSPCIG00000028267) #21	NKX2-3 (ENSPCIG00000032194) #22	SLC25A28 (ENSPCIG00000028275) #23	ENTPD7 (ENSPCIG00000028276) #24	COX15 (ENSPCIG00000028278) #25	CUTC (ENSPCIG00000028280) #26	ENSPCIG00000033203 #27	DNMBP (ENSPCIG00000014360) #28	ENSPCIG00000007979 #29	ENSPCIG00000037354	ENSPCIG00000007973	ENSPCIG00000007968	SHLD2 (ENSPCIG00000028413)	ENSPCIG00000028408	ENSPCIG00000007964	ENSPCIG00000007961	NCOA4 (ENSPCIG00000007954)
koala	MODERN SPECIES	88					ENSPCIG00000000815	ENSPCIG00000001012	ENSPCIG00000001033	KCTD9 (ENSPCIG00000001064)	DOCK5 (ENSPCIG00000001109)	NEFL (ENSPCIG00000027211)	ENSPCIG00000016966	ADAMDEC1 (ENSPCIG00000016489)	ADAM28 (ENSPCIG00000011332)	ENSPCIG00000037234	STC1 (ENSPCIG00000015151)	ENSPCIG00000020778 #22	NKX3-1 (ENSPCIG00000020776)	SLC25A37 (ENSPCIG00000035854)	ENTPD4 (ENSPCIG00000020770) ##24	LOXL2 (ENSPCIG00000020766)	ENSPCIG00000022718 ##15	ENSPCIG00000012977	ENSPCIG00000017687	ENSPCIG00000008474	ENSPCIG00000004217	ENSPCIG00000004209	ENSPCIG00000004202	ENSPCIG00000034175	ENSPCIG00000035733	ENSPCIG00000035968	ENSPCIG00000031966
Tasmanian devil	DUPLICATION
Tasmanian devil	MODERN SPECIES	1	AVPI1 (ENSSHAG00000021027) #9	MARVELD1 (ENSSHAG00000030010) #10	ZFYVE27 (ENSSHAG00000017946) #11	SFRP5 (ENSSHAG00000017924) #12	GOLGA7B (ENSSHAG00000028342) #13	CRTAC1 (ENSSHAG00000017544) #14	ENSSHAG00000026322 #15	LOXL4 (ENSSHAG00000017119) #16	ENSSHAG00000023437	PYROXD2 (ENSSHAG00000016671) #17	HPS1 (ENSSHAG00000016600) #18	ENSSHAG00000022698 #19	ENSSHAG00000014646 #19	CNNM1 (ENSSHAG00000014170) #20	GOT1 (ENSSHAG00000013995) #21	NKX2-3 (ENSSHAG00000013355) #22	SLC25A28 (ENSSHAG00000012792) #23	ENTPD7 (ENSSHAG00000012533) #24	COX15 (ENSSHAG00000012385) #25	CUTC (ENSSHAG00000021965) #26	ENSSHAG00000011765 #27	DNMBP (ENSSHAG00000011335) #28	ENSSHAG00000010622 #29	ENSSHAG00000000782	ENSSHAG00000030063	ENSSHAG00000022709	ENSSHAG00000009424	ENSSHAG00000008667	ENSSHAG00000008523	ENSSHAG00000030087	ENSSHAG00000007181
Tasmanian devil	DUPLICATION
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000008277	BNIP3L (ENSSHAG00000021764)	PPP2R2A (ENSSHAG00000025445)	EBF2 (ENSSHAG00000021589)	ENSSHAG00000014469	KCTD9 (ENSSHAG00000001024)	GNRH1 (ENSSHAG00000029017)	DOCK5 (ENSSHAG00000002033)	ENSSHAG00000028159	NEFM (ENSSHAG00000006728)	ENSSHAG00000011334	ADAMDEC1 (ENSSHAG00000011993)	ADAM28 (ENSSHAG00000012316)	ENSSHAG00000025330	STC1 (ENSSHAG00000026997)	ENSSHAG00000025937 #22	ENSSHAG00000022384 #22	NKX3-1 (ENSSHAG00000015475)	SLC25A37 (ENSSHAG00000021392)	ENTPD4 (ENSSHAG00000031790) ##24	LOXL2 (ENSSHAG00000016252)	ENSSHAG00000024893 ##15	ENSSHAG00000026818	ENSSHAG00000027942	ENSSHAG00000027951	ENSSHAG00000002898	ENSSHAG00000003538	ENSSHAG00000028239	ENSSHAG00000003953	ENSSHAG00000029645	ENSSHAG00000032171
Tasmanian devil	MODERN SPECIES	1	BNIP3L (ENSSHAG00000021764)	PPP2R2A (ENSSHAG00000025445)	EBF2 (ENSSHAG00000021589)	ENSSHAG00000014469	KCTD9 (ENSSHAG00000001024)	GNRH1 (ENSSHAG00000029017)	DOCK5 (ENSSHAG00000002033)	ENSSHAG00000028159	NEFM (ENSSHAG00000006728)	ENSSHAG00000011334	ADAMDEC1 (ENSSHAG00000011993)	ADAM28 (ENSSHAG00000012316)	ENSSHAG00000025330	STC1 (ENSSHAG00000026997)	ENSSHAG00000025937 #22	ENSSHAG00000022384 #22	NKX3-1 (ENSSHAG00000015475)	SLC25A37 (ENSSHAG00000021392)	ENTPD4 (ENSSHAG00000031790) ##24	LOXL2 (ENSSHAG00000016252)	ENSSHAG00000024893 ##15	ENSSHAG00000026818	ENSSHAG00000027942	ENSSHAG00000027951	ENSSHAG00000002898	ENSSHAG00000003538	ENSSHAG00000028239	ENSSHAG00000003953	ENSSHAG00000029645	ENSSHAG00000032171	ENSSHAG00000003235
Platypus	DUPLICATION
Platypus	MODERN SPECIES	14	MARVELD1 (ENSOANG00000009255) #10	ZFYVE27 (ENSOANG00000006007) #11	SFRP5 (ENSOANG00000043234) #12	GOLGA7B (ENSOANG00000047632) #13	CRTAC1 (ENSOANG00000010461) #14	ENSOANG00000045727	ENSOANG00000037303 #15	LOXL4 (ENSOANG00000000515) #16	ENSOANG00000019825	PYROXD2 (ENSOANG00000003471) #17	HPS1 (ENSOANG00000003472) #18	ENSOANG00000039488 #19	ENSOANG00000047769 #19	CNNM1 (ENSOANG00000044842) #20	GOT1 (ENSOANG00000006868) #21	NKX2-3 (ENSOANG00000042302) #22	SLC25A28 (ENSOANG00000006335) #23	ENTPD7 (ENSOANG00000041336) #24	COX15 (ENSOANG00000010125) #25	CUTC (ENSOANG00000011762) #26	ENSOANG00000005819 #27	DNMBP (ENSOANG00000044119) #28	CPN1 (ENSOANG00000043726) #29	ENTPD1 (ENSOANG00000037893)	TCTN3 (ENSOANG00000019944)	ALDH18A1 (ENSOANG00000007159)	SORBS1 (ENSOANG00000005136)	PDLIM1 (ENSOANG00000005138)	HELLS (ENSOANG00000005139)	DNTT (ENSOANG00000005141)	BLNK (ENSOANG00000005144)
Platypus	MODERN SPECIES	16	LYSMD4 (ENSOANG00000043818)	ADAMTS17 (ENSOANG00000000145)	CERS3 (ENSOANG00000007333)	LINS1 (ENSOANG00000011000)	ASB7 (ENSOANG00000039282)	ALDH1A3 (ENSOANG00000004381)	CHSY1 (ENSOANG00000015911)	ENSOANG00000002268	SNRPA1 (ENSOANG00000011754)	PCSK6 (ENSOANG00000002267)	ENSOANG00000008021	ENSOANG00000008022	ENSOANG00000008023	ENSOANG00000008025	STC1 (ENSOANG00000008026)	ENSOANG00000041651 #22	ENSOANG00000008027	SLC25A37 (ENSOANG00000008028)	ENTPD4 (ENSOANG00000013881) ##24	LOXL2 (ENSOANG00000013879)	ENSOANG00000013877 ##15	ENSOANG00000013876	ENSOANG00000040435	ENSOANG00000013875	RHOBTB2 (ENSOANG00000013874)	ENSOANG00000030246	EGR3 (ENSOANG00000045963)	BIN3 (ENSOANG00000047210)	CCAR2 (ENSOANG00000009829)	ENSOANG00000044232	PDLIM2 (ENSOANG00000010783)
Sauria	ANCESTRAL SPECIES	8	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000177979	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000177979	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903
Archosauria	ANCESTRAL SPECIES	7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000177979	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00940000164278	ENSGT00940000160175.b	ENSGT00390000011408	ENSGT00940000163757	ENSGT00940000165097.b	ENSGT00940000165097.a
Australian saltwater crocodile	MODERN SPECIES	1	OGDH (ENSCPRG00005014134)	ENSCPRG00005014148	ADRA1A (ENSCPRG00005014150)	DPYSL2 (ENSCPRG00005014154)	BNIP3L (ENSCPRG00005014164)	PPP2R2A (ENSCPRG00005014169)	EBF2 (ENSCPRG00005014176)	ENSCPRG00005014182	KCTD9 (ENSCPRG00005014183)	GNRH1 (ENSCPRG00005014185)	DOCK5 (ENSCPRG00005014187)	NEFL (ENSCPRG00005014205)	ENSCPRG00005014206	ADAM28 (ENSCPRG00005014210)	STC1 (ENSCPRG00005014220)	ENSCPRG00005014221 #22	ENSCPRG00005014225	ENSCPRG00005014226	ENTPD4 (ENSCPRG00005014227) ##24	LOXL2 (ENSCPRG00005014244)	R3HCC1 (ENSCPRG00005014476) ##15	ENSCPRG00005014487	CHMP7 (ENSCPRG00005014499)	ENSCPRG00005014524	RHOBTB2 (ENSCPRG00005014528)	ENSCPRG00005014531	ENSCPRG00005014534	EGR3 (ENSCPRG00005014537)
Aves	ANCESTRAL SPECIES	6	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000177979	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00940000164278	ENSGT00940000160175.b	ENSGT00390000011408	ENSGT00940000163757	ENSGT00940000165097.b	ENSGT00940000165097.a
African ostrich	MODERN SPECIES	291	SNRPG (ENSSCUG00000002183)	LRRTM4 (ENSSCUG00000002182)	ADRA1A (ENSSCUG00000002179)	PPP2R2A (ENSSCUG00000002162)	EBF2 (ENSSCUG00000002156)	ENSSCUG00000002152	KCTD9 (ENSSCUG00000002150)	GNRH1 (ENSSCUG00000002147)	ENSSCUG00000002144	DOCK5 (ENSSCUG00000002136)	NEFL (ENSSCUG00000002125)	ENSSCUG00000002124	ENSSCUG00000002121	ADAM28 (ENSSCUG00000002115)	STC1 (ENSSCUG00000002106)	ENSSCUG00000002102 #22	SLC25A37 (ENSSCUG00000002096)	ENTPD4 (ENSSCUG00000002092) ##24	LOXL2 (ENSSCUG00000002089)	R3HCC1 (ENSSCUG00000002087) ##15	ENSSCUG00000002086	CHMP7 (ENSSCUG00000002073)
Neognathae	ANCESTRAL SPECIES	7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000177979	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00940000164278	ENSGT00940000160175.b	ENSGT00390000011408	ENSGT00940000163757	ENSGT00940000165097.b	ENSGT00940000165097.a
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00940000177979	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00940000164278	ENSGT00940000160175.b	ENSGT00390000011408	ENSGT00940000163757	ENSGT00940000165097.b	ENSGT00940000165097.a
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000177979	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00940000164278	ENSGT00940000160175.b	ENSGT00390000011408	ENSGT00940000163757	ENSGT00940000165097.b	ENSGT00940000164759
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	22	HOGA1 (ENSSHBG00005020914)	PI4K2A (ENSSHBG00005020904) #8	AVPI1 (ENSSHBG00005020896) #9	MARVELD1 (ENSSHBG00005020893) #10	ZFYVE27 (ENSSHBG00005020886) #11	SFRP5 (ENSSHBG00005020880) #12	GOLGA7B (ENSSHBG00005020876) #13	CRTAC1 (ENSSHBG00005020869) #14	R3HCC1L (ENSSHBG00005020866) #15	LOXL4 (ENSSHBG00005020859) #16	PYROXD2 (ENSSHBG00005020847) #17	HPS1 (ENSSHBG00005020839) #18	HPSE2 (ENSSHBG00005020827) #19	CNNM1 (ENSSHBG00005020808) #20	GOT1 (ENSSHBG00005020787) #21	NKX2-3 (ENSSHBG00005020777) #22	SLC25A28 (ENSSHBG00005020773) #23	ENTPD7 (ENSSHBG00005020766) #24	ATP6V0E2 (ENSSHBG00005020762)	COX15 (ENSSHBG00005020758) #25	CUTC (ENSSHBG00005020740) #26	ENSSHBG00005020733	DNMBP (ENSSHBG00005020724) #28	CPN1 (ENSSHBG00005020718) #29	ENTPD1 (ENSSHBG00005020713)	ENSSHBG00005020708	ADGRA1 (ENSSHBG00005020702)	ENSSHBG00005020698	ENSSHBG00005020690	ENSSHBG00005020686	VENTX (ENSSHBG00005020681)
Kakapo	MODERN SPECIES	14	POLB (ENSSHBG00005007095)	ADRA1A (ENSSHBG00005007111)	DPYSL2 (ENSSHBG00005007213)	BNIP3L (ENSSHBG00005007265)	PPP2R2A (ENSSHBG00005007294)	EBF2 (ENSSHBG00005007343)	ENSSHBG00005007388	KCTD9 (ENSSHBG00005007428)	GNRH1 (ENSSHBG00005007515)	DOCK5 (ENSSHBG00005007942)	NEFL (ENSSHBG00005008568)	ENSSHBG00005008574	ENSSHBG00005008576	ADAM28 (ENSSHBG00005008594)	STC1 (ENSSHBG00005008617)	ENSSHBG00005008627 #22	SLC25A37 (ENSSHBG00005008635)	ENTPD4 (ENSSHBG00005008643) ##24	LOXL2 (ENSSHBG00005008682)	R3HCC1 (ENSSHBG00005009137) ##15	ENSSHBG00005009149	CHMP7 (ENSSHBG00005009166)	ENSSHBG00005009183	ENSSHBG00005009204	RHOBTB2 (ENSSHBG00005009219)	PEBP4 (ENSSHBG00005009230)	EGR3 (ENSSHBG00005009237)	BIN3 (ENSSHBG00005009245)	ENSSHBG00005009257	ENSSHBG00005009266	ENSSHBG00005009299
Golden eagle	DUPLICATION
Golden eagle	MODERN SPECIES	2	MORN4 (ENSACCG00020000670) #7	PI4K2A (ENSACCG00020000698) #8	AVPI1 (ENSACCG00020000729) #9	ZFYVE27 (ENSACCG00020000789) #11	SFRP5 (ENSACCG00020000820) #12	GOLGA7B (ENSACCG00020000849) #13	CRTAC1 (ENSACCG00020000882) #14	R3HCC1L (ENSACCG00020000919) #15	LOXL4 (ENSACCG00020001067) #16	PYROXD2 (ENSACCG00020001152) #17	HPS1 (ENSACCG00020001192) #18	HPSE2 (ENSACCG00020001239) #19	CNNM1 (ENSACCG00020001275) #20	GOT1 (ENSACCG00020001316) #21	ENSACCG00020001328	NKX2-3 (ENSACCG00020001343) #22	SLC25A28 (ENSACCG00020001364) #23	ENTPD7 (ENSACCG00020001384) #24	ATP6V0E2 (ENSACCG00020001403)	COX15 (ENSACCG00020001426) #25	CUTC (ENSACCG00020001448) #26	ENSACCG00020002084	DNMBP (ENSACCG00020002424) #28	CPN1 (ENSACCG00020002478) #29	ENTPD1 (ENSACCG00020002506)	ENSACCG00020002536	ADGRA1 (ENSACCG00020002556)	ENSACCG00020002690	ENSACCG00020002760	ENSACCG00020002774	DNTT (ENSACCG00020002796)
Golden eagle	MODERN SPECIES	4	FAM136A (ENSACCG00020009033)	TGFA (ENSACCG00020009017)	LRRTM4 (ENSACCG00020008990)	ADRA1A (ENSACCG00020008983)	DPYSL2 (ENSACCG00020008944)	BNIP3L (ENSACCG00020008907)	PPP2R2A (ENSACCG00020008869)	EBF2 (ENSACCG00020008815)	KCTD9 (ENSACCG00020008775)	GNRH1 (ENSACCG00020008754)	DOCK5 (ENSACCG00020008101)	NEFL (ENSACCG00020007193)	ENSACCG00020007176	ADAM28 (ENSACCG00020007154)	STC1 (ENSACCG00020007143)	ENSACCG00020007127 #22	NKX3-1 (ENSACCG00020007121)	SLC25A37 (ENSACCG00020007110)	ENTPD4 (ENSACCG00020007093) ##24	LOXL2 (ENSACCG00020007060)	R3HCC1 (ENSACCG00020007034) ##15	ENSACCG00020007019	CHMP7 (ENSACCG00020007000)	ENSACCG00020006951	RHOBTB2 (ENSACCG00020006866)	PEBP4 (ENSACCG00020006801)	EGR3 (ENSACCG00020006772)	BIN3 (ENSACCG00020006753)	ENSACCG00020006738	PDLIM2 (ENSACCG00020006723)	ENSACCG00020006707
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00510000049872 #9	ENSGT00960000193282	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00940000177979	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00940000164278	ENSGT00940000160175.b	ENSGT00390000011408	ENSGT00940000163757	ENSGT00940000165097.b	ENSGT00940000165097.a
Great tit	MODERN SPECIES	26	PI4K2A (ENSPMJG00000004066) #8	ENSPMJG00000004065	MARVELD1 (ENSPMJG00000004062) #10	ZFYVE27 (ENSPMJG00000004057) #11	SFRP5 (ENSPMJG00000004031) #12	GOLGA7B (ENSPMJG00000004029) #13	CRTAC1 (ENSPMJG00000004009) #14	R3HCC1L (ENSPMJG00000003997) #15	LOXL4 (ENSPMJG00000003995) #16	PYROXD2 (ENSPMJG00000003978) #17	HPS1 (ENSPMJG00000003977) #18	HPSE2 (ENSPMJG00000003974) #19	CNNM1 (ENSPMJG00000003971) #20	ENSPMJG00000003969	GOT1 (ENSPMJG00000003964) #21	NKX2-3 (ENSPMJG00000003959) #22	ENTPD7 (ENSPMJG00000003905) #24	SLC25A28 (ENSPMJG00000003901) #23	COX15 (ENSPMJG00000003900) #25	CUTC (ENSPMJG00000003894) #26	ENSPMJG00000003890	DNMBP (ENSPMJG00000003884) #28	CPN1 (ENSPMJG00000003883) #29	ENTPD1 (ENSPMJG00000003877)	ENSPMJG00000003870	DLG5 (ENSPMJG00000003837)	POLR3A (ENSPMJG00000003830)	ENSPMJG00000003823	ZMIZ1 (ENSPMJG00000003792)	PPIF (ENSPMJG00000003782)	ZCCHC24 (ENSPMJG00000003779)
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00940000177979	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00940000164278	ENSGT00940000160175.b	ENSGT00390000011408	ENSGT00940000163757	ENSGT00940000165097.b	ENSGT00940000165097.a
Flycatcher	MODERN SPECIES	14	ENSFALG00000014930	ENSFALG00000011349	ENSFALG00000025071	ADRA1A (ENSFALG00000011334)	ENSFALG00000011296	BNIP3L (ENSFALG00000023027)	PPP2R2A (ENSFALG00000025527)	EBF2 (ENSFALG00000011234)	KCTD9 (ENSFALG00000028013)	GNRH1 (ENSFALG00000011190)	DOCK5 (ENSFALG00000011176)	NEFL (ENSFALG00000011160)	ENSFALG00000011150	ADAM28 (ENSFALG00000011137)	STC1 (ENSFALG00000011130)	ENSFALG00000015342 #22	NKX3-1 (ENSFALG00000028347)	SLC25A37 (ENSFALG00000011115)	ENSFALG00000022939	ENTPD4 (ENSFALG00000023188) ##24	ENSFALG00000011108	LOXL2 (ENSFALG00000011070)	ENSFALG00000024066 ##15	ENSFALG00000023512 ##15	CHMP7 (ENSFALG00000001638)	ENSFALG00000023519	RHOBTB2 (ENSFALG00000001607)	PEBP4 (ENSFALG00000027909)	EGR3 (ENSFALG00000001590)	ENSFALG00000024677	ENSFALG00000016819
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00940000177979	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00940000164278	ENSGT00940000160175.b	ENSGT00390000011408	ENSGT00960000190513	ENSGT00940000165097.b	ENSGT00940000165097.a
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00940000177979	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00940000164278	ENSGT00940000160175.b	ENSGT00390000011408	ENSGT00960000190513	ENSGT00940000165097.b	ENSGT00940000165097.a
Zebra finch	MODERN SPECIES	28	HOGA1 (ENSTGUG00000009624)	MORN4 (ENSTGUG00000009616) #7	PI4K2A (ENSTGUG00000009606) #8	AVPI1 (ENSTGUG00000025747) #9	ZFYVE27 (ENSTGUG00000009586) #11	SFRP5 (ENSTGUG00000023601) #12	GOLGA7B (ENSTGUG00000026467) #13	CRTAC1 (ENSTGUG00000009582) #14	R3HCC1L (ENSTGUG00000009574) #15	LOXL4 (ENSTGUG00000009546) #16	PYROXD2 (ENSTGUG00000009444) #17	HPSE2 (ENSTGUG00000009462) #19	CNNM1 (ENSTGUG00000009430) #20	ENSTGUG00000027229	GOT1 (ENSTGUG00000009418) #21	NKX2-3 (ENSTGUG00000009415) #22	SLC25A28 (ENSTGUG00000009410) #23	ENTPD7 (ENSTGUG00000009398) #24	ATP6V0E2 (ENSTGUG00000009386)	COX15 (ENSTGUG00000009368) #25	CUTC (ENSTGUG00000009354) #26	ENSTGUG00000009186	DNMBP (ENSTGUG00000009180) #28	CPN1 (ENSTGUG00000009169) #29	ENTPD1 (ENSTGUG00000009148)	ENSTGUG00000009131	ADGRA1 (ENSTGUG00000009101)	KNDC1 (ENSTGUG00000009094)	ENSTGUG00000028139	ENSTGUG00000009093	ENSTGUG00000028890
Common canary	MODERN SPECIES	50					ADRA1A (ENSSCAG00000017145)	DPYSL2 (ENSSCAG00000017143)	BNIP3L (ENSSCAG00000017138)	PPP2R2A (ENSSCAG00000017129)	EBF2 (ENSSCAG00000017126)	ENSSCAG00000017124	KCTD9 (ENSSCAG00000017122)	GNRH1 (ENSSCAG00000017120)	DOCK5 (ENSSCAG00000017108)	ENSSCAG00000017105	STC1 (ENSSCAG00000017102)	ENSSCAG00000017101 #22	ENSSCAG00000017100	ENSSCAG00000017098	NEFL (ENSSCAG00000017093)	ENSSCAG00000017091	ENSSCAG00000017089	UNC5D (ENSSCAG00000017086)	ENSSCAG00000017083	ENSSCAG00000017081	ENSSCAG00000017080	ERLIN2 (ENSSCAG00000017072) ##30	PLPBP (ENSSCAG00000017067)	BRF2 (ENSSCAG00000017057)	ENSSCAG00000017056	RAB11FIP1 (ENSSCAG00000017054)	ADRB3 (ENSSCAG00000017053)
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000177979	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00940000164278	ENSGT00940000160175.b	ENSGT00390000011408	ENSGT00940000163757	ENSGT00940000165097.b	ENSGT00940000165097.a
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00940000164861	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00940000177979	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00940000164278	ENSGT00940000160175.b	ENSGT00390000011408	ENSGT00940000163757	ENSGT00940000165097.b	ENSGT00940000165097.a
Japanese quail	MODERN SPECIES	24	PI4K2A (ENSCJPG00005019548) #8	ENSCJPG00005019547	MARVELD1 (ENSCJPG00005019546) #10	ZFYVE27 (ENSCJPG00005019545) #11	SFRP5 (ENSCJPG00005019544) #12	GOLGA7B (ENSCJPG00005019543) #13	CRTAC1 (ENSCJPG00005019542) #14	ENSCJPG00005019540 #15	LOXL4 (ENSCJPG00005019538) #16	ENSCJPG00005019537	HPS1 (ENSCJPG00005019536) #18	HPSE2 (ENSCJPG00005019535) #19	CNNM1 (ENSCJPG00005019534) #20	ENSCJPG00005019533	GOT1 (ENSCJPG00005019532) #21	NKX2-3 (ENSCJPG00005019530) #22	SLC25A28 (ENSCJPG00005019528) #23	ENTPD7 (ENSCJPG00005019527) #24	ATP6V0E2 (ENSCJPG00005019526)	CUTC (ENSCJPG00005019525) #26	COX15 (ENSCJPG00005019524) #25	ENSCJPG00005019523	DNMBP (ENSCJPG00005019522) #28	CPN1 (ENSCJPG00005019521) #29	ENTPD1 (ENSCJPG00005019520)	ENSCJPG00005019518	ADGRA1 (ENSCJPG00005019517)	ENSCJPG00005019514	VENTX (ENSCJPG00005019513)	ENSCJPG00005019512	ENSCJPG00005019511
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00940000164861	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00940000177979	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00940000164278	ENSGT00940000160175.b	ENSGT00390000011408	ENSGT00940000163757	ENSGT00940000165097.b	ENSGT00940000165097.a	ENSGT00940000164759
Turkey	MODERN SPECIES	16				ENSMGAG00000017714	ENSMGAG00000000645	ENSMGAG00000015579	ENSMGAG00000020692	ENSMGAG00000001388	TNFRSF10B (ENSMGAG00000001239)	ENSMGAG00000001375	ENSMGAG00000015582	ENSMGAG00000001356 ##15	ENSMGAG00000001314	ENSMGAG00000001293 ##24	ENSMGAG00000001276	ENSMGAG00000001268 #22	ENSMGAG00000001210	ENSMGAG00000001087	ENSMGAG00000020068	ENSMGAG00000001031	ENSMGAG00000001059	ENSMGAG00000000866	ENSMGAG00000000821	ENSMGAG00000000831	GNRH1 (ENSMGAG00000000861)	ENSMGAG00000000791	ENSMGAG00000021648	ENSMGAG00000019257	ENSMGAG00000000768	ENSMGAG00000021581	ENSMGAG00000000713
Chicken	DUPLICATION
Chicken	MODERN SPECIES	35	PI4K2A (ENSGALG00010020616) #8	AVPI1 (ENSGALG00010020609) #9	MARVELD1 (ENSGALG00010022840) #10	ZFYVE27 (ENSGALG00010020595) #11	SFRP5 (ENSGALG00010017808) #12	GOLGA7B (ENSGALG00010017891) #13	CRTAC1 (ENSGALG00010023163) #14	R3HCC1L (ENSGALG00010017790) #15	PYROXD2 (ENSGALG00010018430) #16	HPS1 (ENSGALG00010018374) #18	HPSE2 (ENSGALG00010018365) #19	CNNM1 (ENSGALG00010018350) #20	ENSGALG00010018328	GOT1 (ENSGALG00010018323) #21	ENSGALG00010018318	NKX2-3 (ENSGALG00010018311) #22	SLC25A28 (ENSGALG00010022250) #23	ENTPD7 (ENSGALG00010022244) #24	COX15 (ENSGALG00010022234) #25	CUTC (ENSGALG00010022221) #26	ENSGALG00010022211	DNMBP (ENSGALG00010022200) #28	CPN1 (ENSGALG00010022154) #29	ENTPD1 (ENSGALG00010022100)	ENSGALG00010021994	ADGRA1 (ENSGALG00010021966)	ENSGALG00010021842	VENTX (ENSGALG00010021796)	VENTX (ENSGALG00010021787)	ENSGALG00010021780	ENSGALG00010021773
Chicken	MODERN SPECIES	14	PRNP (ENSGALG00010018261)	PROM2 (ENSGALG00010018273)	DPYSL2 (ENSGALG00010018309)	BNIP3L (ENSGALG00010018342)	PPP2R2A (ENSGALG00010018438)	EBF2 (ENSGALG00010018726)	ENSGALG00010018862	CDCA2 (ENSGALG00010018865)	KCTD9 (ENSGALG00010018872)	GNRH1 (ENSGALG00010018891)	DOCK5 (ENSGALG00010018915)	NEFL (ENSGALG00010018944)	NEFM (ENSGALG00010018973)	ADAM28 (ENSGALG00010019012)	STC1 (ENSGALG00010019097)	NKX2-6 (ENSGALG00010020189) #22	NKX3-1 (ENSGALG00010020201)	SLC25A37 (ENSGALG00010020244)	ENTPD4 (ENSGALG00010019355) ##24	LOXL2 (ENSGALG00010020025)	R3HCC1 (ENSGALG00010020055) ##15	ENSGALG00010020751	CHMP7 (ENSGALG00010019588)	TNFRSF10B (ENSGALG00010019652)	RHOBTB2 (ENSGALG00010019679)	PEBP4 (ENSGALG00010019726)	EGR3 (ENSGALG00010019322)	ENSGALG00010019328	BIN3 (ENSGALG00010019859)	ENSGALG00010019910	ENSGALG00010019935
Anatidae	ANCESTRAL SPECIES	53	ENSGT00390000006707	ENSGT00940000154909	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a	ENSGT00950000182859.A.a.a.b	ENSGT00940000154352.A	ENSGT00940000154314	ENSGT00390000008225	ENSGT00940000157734	ENSGT00940000156208	ENSGT00940000161685.A.a	ENSGT00940000156716	ENSGT00390000005989.b	ENSGT00940000157556 #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00940000155874	ENSGT00530000063711.a ##15	ENSGT00940000157037.b.b	ENSGT00720000108860	ENSGT00940000158918	ENSGT00940000162387	ENSGT00940000172662	ENSGT00950000182882.B	ENSGT00530000063672.b	ENSGT00950000185549	ENSGT00940000160418.l	ENSGT00940000160558.a
Duck	MODERN SPECIES	1337																ENSAPLG00000014698 #22
Pink-footed goose	DUPLICATION
Pink-footed goose	MODERN SPECIES	11	HOGA1 (ENSABRG00000008109)	PI4K2A (ENSABRG00000008151) #8	MARVELD1 (ENSABRG00000008311) #10	ZFYVE27 (ENSABRG00000008327) #11	SFRP5 (ENSABRG00000008364) #12	GOLGA7B (ENSABRG00000008376) #13	CRTAC1 (ENSABRG00000008392) #14	R3HCC1L (ENSABRG00000008410) #15	LOXL4 (ENSABRG00000008428) #16	PYROXD2 (ENSABRG00000008449) #17	HPS1 (ENSABRG00000008515) #18	HPSE2 (ENSABRG00000008559) #19	CNNM1 (ENSABRG00000000684) #20	GOT1 (ENSABRG00000000737) #21	ENSABRG00000002196	NKX2-3 (ENSABRG00000002204) #22	SLC25A28 (ENSABRG00000002210) #23	ENTPD7 (ENSABRG00000002225) #24	ATP6V0E2 (ENSABRG00000002230)	COX15 (ENSABRG00000002294) #25	CUTC (ENSABRG00000002672) #26	ENSABRG00000002986	DNMBP (ENSABRG00000005624) #28	CPN1 (ENSABRG00000005662) #29	ENTPD1 (ENSABRG00000005680)	ENSABRG00000005753	ADGRA1 (ENSABRG00000005791)	KNDC1 (ENSABRG00000005820)
Pink-footed goose	MODERN SPECIES	148	LRRTM4 (ENSABRG00000019759)	ADRA1A (ENSABRG00000019738)	DPYSL2 (ENSABRG00000019732)	BNIP3L (ENSABRG00000019720)	PPP2R2A (ENSABRG00000019712)	ENSABRG00000019708	ENSABRG00000019700	ENSABRG00000019687	KCTD9 (ENSABRG00000019677)	GNRH1 (ENSABRG00000019675)	DOCK5 (ENSABRG00000018224)	NEFL (ENSABRG00000018141)	ENSABRG00000018139	ADAM28 (ENSABRG00000018129)	STC1 (ENSABRG00000018125)	ENSABRG00000018122 #22	NKX3-1 (ENSABRG00000018119)	SLC25A37 (ENSABRG00000018116)	ENTPD4 (ENSABRG00000018111) ##24	LOXL2 (ENSABRG00000018099)	R3HCC1 (ENSABRG00000018096) ##15	ENSABRG00000018093	CHMP7 (ENSABRG00000018090)	ENSABRG00000018082	RHOBTB2 (ENSABRG00000018077)	PEBP4 (ENSABRG00000018072)
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903
Chinese turtle	MODERN SPECIES	2051														ADAM28 (ENSPSIG00000016321)	STC1 (ENSPSIG00000017289)	ENSPSIG00000017331 #22	NKX3-1 (ENSPSIG00000017342)	SLC25A37 (ENSPSIG00000017344)	ENTPD4 (ENSPSIG00000017481) ##24	LOXL2 (ENSPSIG00000017596)	R3HCC1 (ENSPSIG00000017664) ##15	ENSPSIG00000001640	CHMP7 (ENSPSIG00000017737)	ENSPSIG00000017775	RHOBTB2 (ENSPSIG00000017782)	EGR3 (ENSPSIG00000017819)	BIN3 (ENSPSIG00000017836)	CCAR2 (ENSPSIG00000017945)	PDLIM2 (ENSPSIG00000018014)	ENSPSIG00000018078	PPP3CC (ENSPSIG00000018086)
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000153956.b	ENSGT00530000063604.A	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.f #18	ENSGT00390000004874.a.a.d #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903
Emydidae	ANCESTRAL SPECIES	6	ENSGT00530000063604.A	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.f #18	ENSGT00390000004874.a.a.d #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	39	ENSTMTG00000002590	ARHGAP19 (ENSTMTG00000002583)	ZDHHC16 (ENSTMTG00000002566)	MMS19 (ENSTMTG00000001309)	ENSTMTG00000001035	PI4K2A (ENSTMTG00000001025) #8	AVPI1 (ENSTMTG00000001017) #9	MARVELD1 (ENSTMTG00000001012) #10	ZFYVE27 (ENSTMTG00000000937) #11	ENSTMTG00000000900 #15	PYROXD2 (ENSTMTG00000000830) #17	HPS1 (ENSTMTG00000000563) #18	HPSE2 (ENSTMTG00000000452) #19	CNNM1 (ENSTMTG00000000418) #20	GOT1 (ENSTMTG00000000402) #21	NKX2-3 (ENSTMTG00000000388) #22	SLC25A28 (ENSTMTG00000000367) #23	ENTPD7 (ENSTMTG00000000338) #24	ATP6V0E2 (ENSTMTG00000000315)	COX15 (ENSTMTG00000000300) #25	CUTC (ENSTMTG00000000254) #26	ENSTMTG00000000173	DNMBP (ENSTMTG00000000118) #28	CPN1 (ENSTMTG00000000069) #29	ENTPD1 (ENSTMTG00000006868)	TCTN3 (ENSTMTG00000006805)	ALDH18A1 (ENSTMTG00000006775)
Three-toed box turtle	MODERN SPECIES	20	PRNP (ENSTMTG00000005787)	LRRTM4 (ENSTMTG00000005796)	ADRA1A (ENSTMTG00000005814)	DPYSL2 (ENSTMTG00000006130)	BNIP3L (ENSTMTG00000010506)	PPP2R2A (ENSTMTG00000010521)	EBF2 (ENSTMTG00000010564)	ENSTMTG00000010696	KCTD9 (ENSTMTG00000010704)	GNRH1 (ENSTMTG00000010733)	DOCK5 (ENSTMTG00000010858)	NEFL (ENSTMTG00000011838)	ENSTMTG00000011860	ENSTMTG00000011868	STC1 (ENSTMTG00000011903)	ENSTMTG00000011938 #22	NKX3-1 (ENSTMTG00000011955)	SLC25A37 (ENSTMTG00000011973)	ENTPD4 (ENSTMTG00000011987) ##24	LOXL2 (ENSTMTG00000012011)	ENSTMTG00000012028 ##15	ENSTMTG00000012039 ##15	ENSTMTG00000012049	CHMP7 (ENSTMTG00000012072)	ENSTMTG00000000050	RHOBTB2 (ENSTMTG00000000078)	PEBP4 (ENSTMTG00000000110)	EGR3 (ENSTMTG00000000141)	BIN3 (ENSTMTG00000000159)	CCAR2 (ENSTMTG00000000199)	PDLIM2 (ENSTMTG00000000235)
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	2388	PI4K2A (ENSCPBG00000012171) #8	AVPI1 (ENSCPBG00000012176) #9	MARVELD1 (ENSCPBG00000012178) #10	ZFYVE27 (ENSCPBG00000012184) #11	GOLGA7B (ENSCPBG00000012188) #13	CRTAC1 (ENSCPBG00000012190) #14	ENSCPBG00000012195 #15	LOXL4 (ENSCPBG00000012198) #16	PYROXD2 (ENSCPBG00000012204) #17	ENSCPBG00000012208 #18	ENSCPBG00000012212 #18	ENSCPBG00000012214 #19	ENSCPBG00000012218 #19	CNNM1 (ENSCPBG00000012222) #20	GOT1 (ENSCPBG00000012232) #21	NKX2-3 (ENSCPBG00000012238) #22	ENSCPBG00000012240	SLC25A28 (ENSCPBG00000012244) #23	ATP6V0E2 (ENSCPBG00000012242)	ENTPD7 (ENSCPBG00000012247) #24	COX15 (ENSCPBG00000012256) #25	CUTC (ENSCPBG00000012259) #26	ENSCPBG00000012273	DNMBP (ENSCPBG00000012299) #28	CPN1 (ENSCPBG00000012381) #29	ENTPD1 (ENSCPBG00000012386)	TCTN3 (ENSCPBG00000012391)	ALDH18A1 (ENSCPBG00000012393)
painted turtle	MODERN SPECIES	709	LRRTM4 (ENSCPBG00000002935)	ADRA1A (ENSCPBG00000002911)	DPYSL2 (ENSCPBG00000002884)	BNIP3L (ENSCPBG00000002862)	PPP2R2A (ENSCPBG00000002853)	EBF2 (ENSCPBG00000002840)	ENSCPBG00000002813	KCTD9 (ENSCPBG00000002787)	ENSCPBG00000002771	GNRH1 (ENSCPBG00000002762)	DOCK5 (ENSCPBG00000002708)	NEFL (ENSCPBG00000002688)	ENSCPBG00000002682	ADAM28 (ENSCPBG00000002623)	STC1 (ENSCPBG00000002608)	ENSCPBG00000002598 #22	NKX3-1 (ENSCPBG00000002587)	SLC25A37 (ENSCPBG00000002576)	ENTPD4 (ENSCPBG00000002559) ##24	LOXL2 (ENSCPBG00000002524)	ENSCPBG00000002505 ##15	ENSCPBG00000002491 ##15	ENSCPBG00000002470	CHMP7 (ENSCPBG00000002458)	ENSCPBG00000002438	RHOBTB2 (ENSCPBG00000002392)	ENSCPBG00000002361	PEBP4 (ENSCPBG00000002346)	EGR3 (ENSCPBG00000002327)	BIN3 (ENSCPBG00000002283)	CCAR2 (ENSCPBG00000002266)
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00530000063604.A	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298.f #18	ENSGT00390000004874.a.a.d #19	ENSGT00390000004874.a.a.c #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a
Goode s thornscrub tortoise	DUPLICATION
Goode s thornscrub tortoise	MODERN SPECIES	21	PI4K2A (ENSGEVG00005003337) #8	AVPI1 (ENSGEVG00005003324) #9	MARVELD1 (ENSGEVG00005003317) #10	ZFYVE27 (ENSGEVG00005003269) #11	ENSGEVG00005003246 #12	ENSGEVG00005003240 #13	ENSGEVG00005003202 #14	R3HCC1L (ENSGEVG00005003179) #15	LOXL4 (ENSGEVG00005003041) #16	ENSGEVG00005002965 #17	ENSGEVG00005002944 #17	HPS1 (ENSGEVG00005002869) #18	HPSE2 (ENSGEVG00005002820) #19	CNNM1 (ENSGEVG00005002795) #20	GOT1 (ENSGEVG00005002776) #21	NKX2-3 (ENSGEVG00005002751) #22	SLC25A28 (ENSGEVG00005002739) #23	ENTPD7 (ENSGEVG00005002666) #24	ATP6V0E2 (ENSGEVG00005002649)	COX15 (ENSGEVG00005002611) #25	CUTC (ENSGEVG00005002589) #26	ENSGEVG00005002479	DNMBP (ENSGEVG00005002430) #28	CPN1 (ENSGEVG00005002356) #29	ENTPD1 (ENSGEVG00005002324)	ENSGEVG00005002315	TCTN3 (ENSGEVG00005002176)
Goode s thornscrub tortoise	MODERN SPECIES	11	PRNP (ENSGEVG00005009453)	LRRTM4 (ENSGEVG00005009480)	ADRA1A (ENSGEVG00005009508)	DPYSL2 (ENSGEVG00005009589)	BNIP3L (ENSGEVG00005009903)	PPP2R2A (ENSGEVG00005009996)	EBF2 (ENSGEVG00005010045)	ENSGEVG00005010331	KCTD9 (ENSGEVG00005010357)	GNRH1 (ENSGEVG00005010375)	DOCK5 (ENSGEVG00005010465)	NEFL (ENSGEVG00005011350)	ENSGEVG00005011397	ADAM28 (ENSGEVG00005011467)	STC1 (ENSGEVG00005011653)	ENSGEVG00005011714 #22	NKX3-1 (ENSGEVG00005011757)	SLC25A37 (ENSGEVG00005011795)	ENTPD4 (ENSGEVG00005011820) ##24	LOXL2 (ENSGEVG00005011963)	R3HCC1 (ENSGEVG00005012692) ##15	ENSGEVG00005012706	CHMP7 (ENSGEVG00005012765)	ENSGEVG00005012799	RHOBTB2 (ENSGEVG00005012825)	PEBP4 (ENSGEVG00005012867)	EGR3 (ENSGEVG00005013040)	BIN3 (ENSGEVG00005013081)	CCAR2 (ENSGEVG00005013135)	PDLIM2 (ENSGEVG00005013179)	SORBS3 (ENSGEVG00005013229)
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	2461													ENSCABG00000000541 #19	CNNM1 (ENSCABG00000000554) #20	GOT1 (ENSCABG00000000614) #21	NKX2-3 (ENSCABG00000001757) #22	ENSCABG00000001758	PEX26 (ENSCABG00000001761)	ENSCABG00000001764	ENSCABG00000001766	USP18 (ENSCABG00000001776)	ENSCABG00000001833	ENSCABG00000001916	ENSCABG00000001964
Abingdon island giant tortoise	MODERN SPECIES	874												NEFL (ENSCABG00000012203)	ENSCABG00000012201	ENSCABG00000012200	STC1 (ENSCABG00000012197)	ENSCABG00000012195 #22	NKX3-1 (ENSCABG00000012193)	SLC25A37 (ENSCABG00000012192)	ENTPD4 (ENSCABG00000012191) ##24
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000177979	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903
Episquamata	ANCESTRAL SPECIES	2	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000177979	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903	ENSGT00940000161528	ENSGT00390000013063	ENSGT00530000063947.B	ENSGT00940000156789
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903	ENSGT00940000161528	ENSGT00390000013063	ENSGT00530000063947.B	ENSGT00940000156789
Elapidae	ANCESTRAL SPECIES	4	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903	ENSGT00940000161528	ENSGT00390000013063	ENSGT00530000063947.B	ENSGT00940000156789
Indian cobra	MODERN SPECIES	3	PI4K2A (ENSNNAG00000003173) #8	ENSNNAG00000003189 #9	MARVELD1 (ENSNNAG00000003201) #10	ZFYVE27 (ENSNNAG00000003209) #11	SFRP5 (ENSNNAG00000003224) #12	GOLGA7B (ENSNNAG00000003241) #13	CRTAC1 (ENSNNAG00000003254) #14	R3HCC1L (ENSNNAG00000003273) #15	ENSNNAG00000003322 #16	PYROXD2 (ENSNNAG00000003519) #17	HPS1 (ENSNNAG00000003839) #18	ENSNNAG00000003872 #19	ENSNNAG00000003927 #19	CNNM1 (ENSNNAG00000003938) #20	GOT1 (ENSNNAG00000003975) #21	NKX2-3 (ENSNNAG00000004007) #22	SLC25A28 (ENSNNAG00000004021) #23	ENTPD7 (ENSNNAG00000004035) #24	ATP6V0E2 (ENSNNAG00000004073)	COX15 (ENSNNAG00000004090) #25	CUTC (ENSNNAG00000004119) #26	ENSNNAG00000004263	DNMBP (ENSNNAG00000005362) #28	CPN1 (ENSNNAG00000005446) #29	ENTPD1 (ENSNNAG00000005470)	TCTN3 (ENSNNAG00000005494)	ALDH18A1 (ENSNNAG00000005661)	DUSP28 (ENSNNAG00000007679)	ENSNNAG00000007711	PARL (ENSNNAG00000007735)	MAP6D1 (ENSNNAG00000007778)
Elapidae_a	ANCESTRAL SPECIES		ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00940000164861	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903	ENSGT00940000161528	ENSGT00390000013063	ENSGT00530000063947.B	ENSGT00940000156789
Blue-lipped sea krait	MODERN SPECIES	2286																NKX2-3 (ENSLLTG00000003305) #22	SLC25A28 (ENSLLTG00000003317) #23	ENTPD7 (ENSLLTG00000003336) #24	ATP6V0E2 (ENSLLTG00000003364)	COX15 (ENSLLTG00000003379) #25	CUTC (ENSLLTG00000003406) #26
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00730000111173 #7	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00940000164861	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903	ENSGT00940000161528	ENSGT00390000013063	ENSGT00530000063947.B	ENSGT00940000156789
Mainland tiger snake	MODERN SPECIES		MORN4 (ENSNSUG00000007384) #7	PI4K2A (ENSNSUG00000007385) #8	AVPI1 (ENSNSUG00000007386) #9	MARVELD1 (ENSNSUG00000007387) #10	ZFYVE27 (ENSNSUG00000007388) #11	SFRP5 (ENSNSUG00000007389) #12	GOLGA7B (ENSNSUG00000007400) #13	CRTAC1 (ENSNSUG00000007402) #14	R3HCC1L (ENSNSUG00000007415) #15	LOXL4 (ENSNSUG00000007419) #16	ENSNSUG00000007463	HPS1 (ENSNSUG00000007471) #18	HPSE2 (ENSNSUG00000007487) #19	CNNM1 (ENSNSUG00000007490) #20	GOT1 (ENSNSUG00000007630) #21	NKX2-3 (ENSNSUG00000007632) #22	SLC25A28 (ENSNSUG00000007635) #23	ENTPD7 (ENSNSUG00000007636) #24	ATP6V0E2 (ENSNSUG00000007665)	COX15 (ENSNSUG00000007670) #25	CUTC (ENSNSUG00000007671) #26	ENSNSUG00000007693	DNMBP (ENSNSUG00000010693) #28	CPN1 (ENSNSUG00000010695) #29	ENTPD1 (ENSNSUG00000010696)	TCTN3 (ENSNSUG00000010698)	ALDH18A1 (ENSNSUG00000010719)	DUSP28 (ENSNSUG00000010886)	ENSNSUG00000010887	PARL (ENSNSUG00000010889)	MAP6D1 (ENSNSUG00000010891)
Lizard	MODERN SPECIES	2	AVPI1 (ENSACAG00000027657) #9	MARVELD1 (ENSACAG00000003046) #10	ZFYVE27 (ENSACAG00000003048) #11	SFRP5 (ENSACAG00000003105) #12	GOLGA7B (ENSACAG00000028949) #13	CRTAC1 (ENSACAG00000003141) #14	R3HCC1L (ENSACAG00000003217) #15	LOXL4 (ENSACAG00000003263) #16	PYROXD2 (ENSACAG00000003367) #17	ENSACAG00000042996	HPS1 (ENSACAG00000002534) #18	ENSACAG00000039564	HPSE2 (ENSACAG00000003429) #19	CNNM1 (ENSACAG00000003524) #20	GOT1 (ENSACAG00000003583) #21	NKX2-3 (ENSACAG00000034886) #22	SLC25A28 (ENSACAG00000003687) #23	ENTPD7 (ENSACAG00000003702) #24	ENSACAG00000026586	COX15 (ENSACAG00000003767) #25	ENSACAG00000003797 #26	ENSACAG00000003972	DNMBP (ENSACAG00000004166) #28	ENSACAG00000004193 #29	ENTPD1 (ENSACAG00000004301)	ENSACAG00000004453	ALDH18A1 (ENSACAG00000004480)	DUSP28 (ENSACAG00000045538)	ENSACAG00000028796	PARL (ENSACAG00000004648)	MAP6D1 (ENSACAG00000025315)
Laterata	ANCESTRAL SPECIES		ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000177979	ENSGT00940000157556 #22	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00570000079101.a.a	ENSGT00500000044903	ENSGT00940000161528	ENSGT00390000013063	ENSGT00530000063947.B	ENSGT00940000156789
Common wall lizard	MODERN SPECIES	13	AVPI1 (ENSPMRG00000003011) #9	MARVELD1 (ENSPMRG00000003018) #10	ZFYVE27 (ENSPMRG00000003032) #11	SFRP5 (ENSPMRG00000003057) #12	GOLGA7B (ENSPMRG00000003064) #13	CRTAC1 (ENSPMRG00000003081) #14	R3HCC1L (ENSPMRG00000003100) #15	LOXL4 (ENSPMRG00000003119) #16	PYROXD2 (ENSPMRG00000003147) #17	ENSPMRG00000003158	HPS1 (ENSPMRG00000003174) #18	HPSE2 (ENSPMRG00000003207) #19	CNNM1 (ENSPMRG00000003219) #20	ENSPMRG00000003228 #21	ENSPMRG00000003236	NKX2-3 (ENSPMRG00000003244) #22	SLC25A28 (ENSPMRG00000003256) #23	ENTPD7 (ENSPMRG00000003262) #24	ATP6V0E2 (ENSPMRG00000003272)	COX15 (ENSPMRG00000003281) #25	CUTC (ENSPMRG00000003293) #26	ENSPMRG00000003312	DNMBP (ENSPMRG00000003333) #28	CPN1 (ENSPMRG00000003351) #29	ENTPD1 (ENSPMRG00000003388)	TCTN3 (ENSPMRG00000003398)	ALDH18A1 (ENSPMRG00000003436)	DUSP28 (ENSPMRG00000003450)	ENSPMRG00000003455	PARL (ENSPMRG00000003463)	YEATS2 (ENSPMRG00000003474)
Argentine black and white tegu	MODERN SPECIES	19	PI4K2A (ENSSMRG00000021688) #8	AVPI1 (ENSSMRG00000021689) #9	MARVELD1 (ENSSMRG00000021690) #10	ZFYVE27 (ENSSMRG00000021691) #11	SFRP5 (ENSSMRG00000021692) #12	GOLGA7B (ENSSMRG00000021693) #13	CRTAC1 (ENSSMRG00000021695) #14	R3HCC1L (ENSSMRG00000021696) #15	LOXL4 (ENSSMRG00000021697) #16	PYROXD2 (ENSSMRG00000021698) #17	HPS1 (ENSSMRG00000021699) #18	HPSE2 (ENSSMRG00000021700) #19	CNNM1 (ENSSMRG00000021701) #20	GOT1 (ENSSMRG00000021702) #21	ENSSMRG00000021703	NKX2-3 (ENSSMRG00000021704) #22	SLC25A28 (ENSSMRG00000021705) #23	ENTPD7 (ENSSMRG00000021706) #24	ATP6V0E2 (ENSSMRG00000021707)	COX15 (ENSSMRG00000021708) #25	CUTC (ENSSMRG00000021709) #26	ENSSMRG00000021710	DNMBP (ENSSMRG00000021711) #28	CPN1 (ENSSMRG00000021953) #29	ENTPD1 (ENSSMRG00000021954)	TCTN3 (ENSSMRG00000021955)	ALDH18A1 (ENSSMRG00000021956)	DUSP28 (ENSSMRG00000021957)	ENSSMRG00000021958	ENSSMRG00000021959	PARL (ENSSMRG00000021960)
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1056	ANKRD2 (ENSSPUG00000012723)	HOGA1 (ENSSPUG00000012791)	MORN4 (ENSSPUG00000012878) #7	PI4K2A (ENSSPUG00000012888) #8	AVPI1 (ENSSPUG00000012899) #9	MARVELD1 (ENSSPUG00000012901) #10	ZFYVE27 (ENSSPUG00000012905) #11	SFRP5 (ENSSPUG00000012919) #12	GOLGA7B (ENSSPUG00000012927) #13	CRTAC1 (ENSSPUG00000012944) #14	ENSSPUG00000012961 #15	HPS1 (ENSSPUG00000013028) #18	HPSE2 (ENSSPUG00000013059) #19	CNNM1 (ENSSPUG00000013124) #20	GOT1 (ENSSPUG00000013156) #21	NKX2-3 (ENSSPUG00000013168) #22	SLC25A28 (ENSSPUG00000013238) #23	ENSSPUG00000013368	COX15 (ENSSPUG00000013395) #25	CUTC (ENSSPUG00000013469) #26	ENSSPUG00000013623	DNMBP (ENSSPUG00000014122) #28	CPN1 (ENSSPUG00000014172) #29
tuatara	MODERN SPECIES	990															STC1 (ENSSPUG00000013064)	ENSSPUG00000013050 #22	SLC25A37 (ENSSPUG00000013035)	ENTPD4 (ENSSPUG00000013006) ##24	LOXL2 (ENSSPUG00000012657)	ENSSPUG00000012548 ##15	ENSSPUG00000012520 ##15	ENSSPUG00000012504	CHMP7 (ENSSPUG00000012487)	ENSSPUG00000012472	ENSSPUG00000012404	EGR3 (ENSSPUG00000012400)	BIN3 (ENSSPUG00000012379)	CCAR2 (ENSSPUG00000012349)	PDLIM2 (ENSSPUG00000012330)	SORBS3 (ENSSPUG00000012270)	PPP3CC (ENSSPUG00000012227)
Anura	ANCESTRAL SPECIES	25	ENSGT00390000010434.b #8	ENSGT00510000049872 #9	ENSGT00510000049375 #10	ENSGT00390000013298 #11	ENSGT00940000160608 #12	ENSGT00390000000134.a #13	ENSGT00390000013726 #14	ENSGT00530000063711.b #15	ENSGT00940000157042 #16	ENSGT00940000161036.B	ENSGT00390000011684 #17	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00950000183088.a.b.a #28	ENSGT00940000158235 #29	ENSGT01100000263542.C	ENSGT00500000044903
Frog	DUPLICATION
Frog	MODERN SPECIES	7	sfrp5 (ENSXETG00000024699) #12	golga7b (ENSXETG00000039738) #13	crtac1 (ENSXETG00000030508) #14	ENSXETG00000042342	r3hcc1l (ENSXETG00000038254) #15	loxl4 (ENSXETG00000015828) #16	ENSXETG00000033896	pyroxd2 (ENSXETG00000018402) #17	hps1 (ENSXETG00000036836) #18	hpse2 (ENSXETG00000018422) #19	cnnm1 (ENSXETG00000018427) #20	ENSXETG00000043400	got1 (ENSXETG00000018428) #21	ENSXETG00000048822	ENSXETG00000043602	nkx2-3 (ENSXETG00000036831) #22	nkx3-3 (ENSXETG00000018432)	slc25a28 (ENSXETG00000035534) #23	entpd7 (ENSXETG00000003746) #24	cutc (ENSXETG00000003744) #26	cox15 (ENSXETG00000003745) #25	abcc2 (ENSXETG00000003740)	dnmbp (ENSXETG00000003739) #28	cpn1 (ENSXETG00000003737) #29	entpd1 (ENSXETG00000003736)	pcdh8l (ENSXETG00000003735)	myof.1 (ENSXETG00000003734)	cep55 (ENSXETG00000035829)	ffar4 (ENSXETG00000003732)	rbp4 (ENSXETG00000003731)	pde6c (ENSXETG00000003730)
Frog	MODERN SPECIES	3	kctd9 (ENSXETG00000034350)	gnrh1 (ENSXETG00000010147)	dock5 (ENSXETG00000031383)	nefl (ENSXETG00000010142)	nefm (ENSXETG00000010128)	adam28.1 (ENSXETG00000030278)	adam28.2 (ENSXETG00000031918)	ENSXETG00000036350	ENSXETG00000040043	ENSXETG00000039067	ENSXETG00000043152	ENSXETG00000036133	ENSXETG00000040335	ENSXETG00000032381	stc1 (ENSXETG00000007763)	nkx2-6 (ENSXETG00000007764) #22	nkx3-1 (ENSXETG00000042692)	slc25a37 (ENSXETG00000007767)	ENSXETG00000043810	entpd4 (ENSXETG00000007770) ##24	ENSXETG00000039473	loxl2 (ENSXETG00000007773)	ENSXETG00000038154	ENSXETG00000044937	sfrp1 (ENSXETG00000007776)	golga7 (ENSXETG00000035723) ##13	tcim (ENSXETG00000007782)	ido1 (ENSXETG00000039794)	stambp (ENSXETG00000007783)	retsat (ENSXETG00000007784)	XB5812047 [provisional:casp7] (ENSXETG00000019016)
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	9	ENSLLEG00000021261	ENSLLEG00000021312	ENSLLEG00000021381	ENSLLEG00000021410 #11	ENSLLEG00000021541	GOLGA7B (ENSLLEG00000021577) #13	SFRP5 (ENSLLEG00000021734) #12	CRTAC1 (ENSLLEG00000021817) #14	R3HCC1L (ENSLLEG00000022943) #15	LOXL4 (ENSLLEG00000023007) #16	ENSLLEG00000023225	HPS1 (ENSLLEG00000023369) #18	HPSE2 (ENSLLEG00000023742) #19	CNNM1 (ENSLLEG00000023809) #20	GOT1 (ENSLLEG00000024001) #21	ENSLLEG00000024278 #22	ENSLLEG00000024314	ENSLLEG00000024359	SLC25A28 (ENSLLEG00000024415) #23	ENTPD7 (ENSLLEG00000024551) #24	ENSLLEG00000024655	ATP6V0E2 (ENSLLEG00000024672)	COX15 (ENSLLEG00000024720) #25	CUTC (ENSLLEG00000024824) #26	ENSLLEG00000015069	DNMBP (ENSLLEG00000015304) #28	CPN1 (ENSLLEG00000016076) #29	ENTPD1 (ENSLLEG00000016172)	ALDH18A1 (ENSLLEG00000016471)	TEX36 (ENSLLEG00000016765)	EDRF1 (ENSLLEG00000016850)
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000016564	ENSLLEG00000016538	BNIP3L (ENSLLEG00000016427)	ENSLLEG00000015793	EBF2 (ENSLLEG00000015288)	ENSLLEG00000015043	KCTD9 (ENSLLEG00000014581)	DOCK5 (ENSLLEG00000014183)	NEFL (ENSLLEG00000014130)	ENSLLEG00000013987	ENSLLEG00000013422	ENSLLEG00000012998	ENSLLEG00000012950	ENSLLEG00000012926	STC1 (ENSLLEG00000012894)	ENSLLEG00000012872 #22	NKX3-1 (ENSLLEG00000012849)	SLC25A37 (ENSLLEG00000012777)	ENTPD4 (ENSLLEG00000012420) ##24	ENSLLEG00000012314	ENSLLEG00000012235	ENSLLEG00000011993	ENSLLEG00000011934	GOLGA7 (ENSLLEG00000011730) ##13	ENSLLEG00000011686	SFRP1 (ENSLLEG00000011648)	ENSLLEG00000011626	ENSLLEG00000011608	TCIM (ENSLLEG00000011572)	ENSLLEG00000011418	STAMBP (ENSLLEG00000011282)
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	956													CNNM1 (ENSLACG00000014142) #20	GOT1 (ENSLACG00000013959) #21	PI4K2A (ENSLACG00000013641) #8	ENSLACG00000013129 #22	nkx3.3 (ENSLACG00000012763)	ENSLACG00000012533	SLC25A28 (ENSLACG00000011624) #23	ENTPD7 (ENSLACG00000010971) #24	ENSLACG00000010566	CUTC (ENSLACG00000009503) #26	ENSLACG00000008348	DNMBP (ENSLACG00000005565) #28	CPN1 (ENSLACG00000004583) #29	ENTPD1 (ENSLACG00000003524)
Coelacanth	MODERN SPECIES	332		ENSLACG00000017847	DPYSL2 (ENSLACG00000017733)	BNIP3L (ENSLACG00000017677)	PPP2R2A (ENSLACG00000017581)	TMEM230 (ENSLACG00000017549)	EBF2 (ENSLACG00000017271)	KCTD9 (ENSLACG00000016937)	GNRH1 (ENSLACG00000016897)	DOCK5 (ENSLACG00000016696)	NEFL (ENSLACG00000016495)	ENSLACG00000016414	ADAM28 (ENSLACG00000015824)	ENSLACG00000015689	STC1 (ENSLACG00000014878)	ENSLACG00000014473 #22	SLC25A37 (ENSLACG00000014043)	ENTPD4 (ENSLACG00000013528) ##24	LOXL2 (ENSLACG00000012041)	R3HCC1 (ENSLACG00000011894) ##15	GOLGA7 (ENSLACG00000011323) ##13	sfrp1b (ENSLACG00000009826)	SFRP1 (ENSLACG00000008678)	ZMAT4 (ENSLACG00000006206)	ido1 (ENSLACG00000002981)	ADAM9 (ENSLACG00000000930)
Actinopterygii	ANCESTRAL SPECIES	47	ENSGT01100000263518.A.b	ENSGT00940000157331	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00940000162611.b	ENSGT00940000175336	ENSGT00730000111173 #7	ENSGT00530000063604.A	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000164861	ENSGT00940000161036.B	ENSGT00940000157042 #16	ENSGT00530000063711.b #15	ENSGT00390000013726 #14	ENSGT00390000000134.a #13	ENSGT00940000160608 #12	ENSGT00390000013298 #11	ENSGT00510000049872 #9	ENSGT00390000010434.b #8
Neopterygii	ANCESTRAL SPECIES	18	ENSGT00940000157331	ENSGT00940000157322.b.a	ENSGT00940000170319	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00940000162611.b	ENSGT00940000175336	ENSGT00730000111173 #7	ENSGT00530000063604.A	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525 #20	ENSGT00950000183082.b.b.b #21	ENSGT00940000157556 #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000164861	ENSGT00940000161036.B	ENSGT00940000157042 #16	ENSGT00530000063711.b #15	ENSGT00390000013726 #14	ENSGT00390000000134.a #13	ENSGT00940000160608 #12	ENSGT00390000013298 #11	ENSGT00510000049872 #9	ENSGT00390000010434.b #8
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	108	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000170319	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00940000162611.b	ENSGT00940000175336	ENSGT00730000111173 #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000157042.c.b #16	ENSGT00530000063711.b #15	ENSGT00390000013726.d #14
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	177	ENSGT00530000063586.a	ENSGT00390000001546.e	ENSGT00390000002554.ab	ENSGT00940000157798.b.i.a	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157322.b.a.b	ENSGT00940000154965.A	ENSGT00940000162611.a	ENSGT00940000162611.b	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.a.a #22	ENSGT00940000157049.b #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B	ENSGT00940000157042.c.b #16	ENSGT00530000063711.b #15	ENSGT00390000013726.d #14	ENSGT00390000000134.a #13	ENSGT00940000160608.d #12	ENSGT00390000013298 #11	ENSGT00940000165757.a.b	ENSGT00940000165757.b	ENSGT00510000049375.b #10	ENSGT00970000193827.b
P. kingsleyae	MODERN SPECIES	18	KCNJ16 (ENSPKIG00000014415)	kcnj2a (ENSPKIG00000014425)	map2k6 (ENSPKIG00000014459)	ldb1a (ENSPKIG00000014537)	HPS6 (ENSPKIG00000014625)	armh3 (ENSPKIG00000014676)	KCNIP2 (ENSPKIG00000014808)	ENSPKIG00000014871	ARHGAP19 (ENSPKIG00000014888)	slit1a (ENSPKIG00000014953)	ENSPKIG00000015096	ENSPKIG00000015112	hoga1 (ENSPKIG00000015141)	CNNM1 (ENSPKIG00000015185) #20	got1 (ENSPKIG00000015231) ##21	ENSPKIG00000015279 #22	ENTPD7 (ENSPKIG00000015335) #24	ENSPKIG00000015431	atpv0e2 (ENSPKIG00000015481)	zgc:123010 (ENSPKIG00000015521)	LOXL4 (ENSPKIG00000015645) #16	ENSPKIG00000015770 #15	golga7ba (ENSPKIG00000015794) #13	sfrp5 (ENSPKIG00000015815) #12	zfyve27 (ENSPKIG00000015847) #11	ENSPKIG00000015911	marveld1 (ENSPKIG00000015922) #10	pi4k2a (ENSPKIG00000015941) #8	ENSPKIG00000015982	cdc25d (ENSPKIG00000015992)	ENSPKIG00000016019
Asian bonytongue	MODERN SPECIES	7	sos1 (ENSSFOG00015021801)	RDH13 (ENSSFOG00015021758)	MTCH1 (ENSSFOG00015021748)	CEPT1 (ENSSFOG00015021734)	dram2b (ENSSFOG00015021718)	DENND2D (ENSSFOG00015021696)	cry4 (ENSSFOG00015021663)	cry3b (ENSSFOG00015021641)	ENSSFOG00015028602	btg2 (ENSSFOG00015025911)	znf76 (ENSSFOG00015021590)	zgc:162255 (ENSSFOG00015021558)	arl8a (ENSSFOG00015025526)	GPR37L1 (ENSSFOG00015021529)	ELF3 (ENSSFOG00015021503)	ENSSFOG00015032775 #22	slc25a28 (ENSSFOG00015029681) #23	ENSSFOG00015021453 #24	ENSSFOG00015021438	atpv0e2 (ENSSFOG00015021421)	zgc:123010 (ENSSFOG00015033231)	LOXL4 (ENSSFOG00015021356) #16	ENSSFOG00015021345 #15	crtac1a (ENSSFOG00015021330) #14	golga7ba (ENSSFOG00015021310) #13	sfrp5 (ENSSFOG00015021295) #12	zfyve27 (ENSSFOG00015021259) #11	ENSSFOG00015021238	ENSSFOG00015030168	marveld1 (ENSSFOG00015021229) #10	ENSSFOG00015025046
Osteoglossiformes	ANCESTRAL SPECIES	268												ENSGT00940000168493	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157556.a.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.a #23	ENSGT00940000164861	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00940000160608.c #12	ENSGT00940000165757.a.a	ENSGT00510000049375.a #10	ENSGT00970000193827.a	ENSGT00390000010434.b.b #8	ENSGT00950000182926.b.d.a.a.a.a	ENSGT00390000015287	ENSGT00940000155032.k	ENSGT00390000013106	ENSGT00940000156522.d
P. kingsleyae	MODERN SPECIES	194	oga (ENSPKIG00000007634)	ENSPKIG00000007675	ENSPKIG00000007738	ENSPKIG00000007848	KCNIP2 (ENSPKIG00000007860)	cox15 (ENSPKIG00000007901) #25	cutc (ENSPKIG00000007956) #26	ENSPKIG00000008056	ENSPKIG00000008212	ENSPKIG00000008231	ENSPKIG00000008260	ENSPKIG00000008291	st3gal7 (ENSPKIG00000008318)	hps1 (ENSPKIG00000008360) #18	HPSE2 (ENSPKIG00000008417) #19	ENSPKIG00000008449 #22	nkx3.3 (ENSPKIG00000008463)	slc25a28 (ENSPKIG00000008475) #23	pyroxd2 (ENSPKIG00000008509)	LOXL4 (ENSPKIG00000008573) #16	CRTAC1 (ENSPKIG00000008679) #14	ENSPKIG00000008860	cyp1b1 (ENSPKIG00000008930)	sufu (ENSPKIG00000008960)	ENSPKIG00000009055	PDZD7 (ENSPKIG00000009127)	sfxn3 (ENSPKIG00000009170)	selenou1a (ENSPKIG00000009214)	ENSPKIG00000009243	si:ch211-198a12.6 (ENSPKIG00000009261)	stox1 (ENSPKIG00000009267)
Asian bonytongue	MODERN SPECIES	23	ARMH3 (ENSSFOG00015015360)	ENSSFOG00015032288	KCNIP2 (ENSSFOG00015015460)	cox15 (ENSSFOG00015015485) #25	cutc (ENSSFOG00015025714) #26	ENSSFOG00015015558	ENSSFOG00015015619	slit1a (ENSSFOG00015015642)	ENSSFOG00015015746	ENSSFOG00015031827	ENSSFOG00015029523	ENSSFOG00015015789	hps1 (ENSSFOG00015015808) #18	HPSE2 (ENSSFOG00015015866) #19	got1 (ENSSFOG00015015891) ##21	ENSSFOG00015032867 #22	nkx3.3 (ENSSFOG00015032059)	slc25a28 (ENSSFOG00015015925) #23	ENSSFOG00015015940	pyroxd2 (ENSSFOG00015015984)	ENSSFOG00015016044 #16	CRTAC1 (ENSSFOG00015016089) #14	sfrp5 (ENSSFOG00015016130) #12	ENSSFOG00015016149	ENSSFOG00015029493	marveld1 (ENSSFOG00015016233) #10	ENSSFOG00015016242	pi4k2a (ENSSFOG00015016255) #8	ENSSFOG00015016277	exosc1 (ENSSFOG00015016289)	zdhhc16a (ENSSFOG00015016331)
Clupeocephala	ANCESTRAL SPECIES	97	ENSGT00940000157798.b	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000170319	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000175336	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b
Euteleosteomorpha	ANCESTRAL SPECIES	79							ENSGT01010000222294.c.b.b.a.a.a.a.b	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT00940000178559	ENSGT00530000063801.a.a	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774	ENSGT00510000046773.a.b.c.b	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a	ENSGT00510000048276
Acanthomorphata	ANCESTRAL SPECIES	89							ENSGT01010000222294.c.b.b.a.a.a.a.b	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT00940000178559	ENSGT00530000063801.a.a	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774	ENSGT00510000046773.a.b.c.b	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a	ENSGT00510000048276
Euacanthomorphacea	ANCESTRAL SPECIES	47							ENSGT01010000222294.c.b.b.a.a.a.a.b	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT00940000176087	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A	ENSGT00900000141021.b.b	ENSGT00940000166436
Percomorphaceae	ANCESTRAL SPECIES	17							ENSGT01010000222294.c.b.b.a.a.a.a.b	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT00940000176087	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A	ENSGT00900000141021.b.b	ENSGT00940000166436
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT00990000203852	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT00990000203852	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b.l	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000168493	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT00990000203852	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00980000198884	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb
Tetraodontidae	ANCESTRAL SPECIES	16	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00940000177979	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000158659	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601
Fugu	MODERN SPECIES	8	ugp2a (ENSTRUG00000008604)	vps54 (ENSTRUG00000008328)	ENSTRUG00000008203	slc29a2 (ENSTRUG00000007976)	lgalsla (ENSTRUG00000007880)	aftpha (ENSTRUG00000021951)	ENSTRUG00000025352	ENSTRUG00000033070	ENSTRUG00000007617	slit1b (ENSTRUG00000006451)	ENSTRUG00000006194	MORN4 (ENSTRUG00000006096) #7	hoga1 (ENSTRUG00000005878)	cnnm1b (ENSTRUG00000033303) #20	ENSTRUG00000029841	NKX2-3 (ENSTRUG00000003800) #22	slc25a28 (ENSTRUG00000005224) #23	ENTPD7 (ENSTRUG00000004587) #24	ENSTRUG00000025299	atpv0e2 (ENSTRUG00000020769)	ENSTRUG00000004488	ENSTRUG00000030550	ENSTRUG00000026608	ENSTRUG00000003633	pus10 (ENSTRUG00000002744)	cct4 (ENSTRUG00000001819)	ENSTRUG00000033170	ENSTRUG00000001723	USP34 (ENSTRUG00000031278)	commd1 (ENSTRUG00000023095)	b3gnt2a (ENSTRUG00000001047)
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000168493	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT00990000203852	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00980000198884	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb
Ballan wrasse	MODERN SPECIES	465												MORN4 (ENSLBEG00000013102) #7	hoga1 (ENSLBEG00000013133)	CNNM1 (ENSLBEG00000013164) #20	GOT1 (ENSLBEG00000013202) ##21	NKX2-3 (ENSLBEG00000013270) #22	slc25a28 (ENSLBEG00000013312) #23	ENTPD7 (ENSLBEG00000013358) #24	ENSLBEG00000013442	atpv0e2 (ENSLBEG00000013498)	ENSLBEG00000013518	c3b.2 (ENSLBEG00000013581)	crb3b (ENSLBEG00000013699)	ENSLBEG00000013720	ENSLBEG00000013793
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b.l	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000168493	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000177979	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT00990000203852	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.a.a.f	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.b.c.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00980000198884	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016
Perciformes	ANCESTRAL SPECIES	2	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000168493	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000177979	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.b	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A	ENSGT00900000141021.b.b.f
Perciformes_a	ANCESTRAL SPECIES		ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000168493	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.b.d	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00980000198884	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A
Channel bull blenny	MODERN SPECIES	149																NKX2-3 (ENSCGOG00000021646) #22	slc25a28 (ENSCGOG00000021645) #23	ENTPD7 (ENSCGOG00000021480) #24	ENSCGOG00000021472	atpv0e2 (ENSCGOG00000021470)	ENSCGOG00000021468	ENSCGOG00000021466	ENSCGOG00000021465	ENSCGOG00000021460	ENSCGOG00000021456	ENSCGOG00000021454	ENSCGOG00000021450	ENSCGOG00000021449	ENSCGOG00000021446	yju2b (ENSCGOG00000021443)	gtf3aa (ENSCGOG00000021440)
Pike perch	MODERN SPECIES	151	hk1 (ENSSLUG00000017014)	ENSSLUG00000017331	dla (ENSSLUG00000017336)	ENSSLUG00000017349	ENSSLUG00000017356	ENSSLUG00000017362	ENSSLUG00000017371	ARHGAP19 (ENSSLUG00000017387)	slit1b (ENSSLUG00000017676)	ENSSLUG00000018035	ENSSLUG00000018040	ENSSLUG00000018044	hoga1 (ENSSLUG00000018050)	CNNM1 (ENSSLUG00000018055) #20	GOT1 (ENSSLUG00000018061) ##21	ENSSLUG00000018067 #22	slc25a28 (ENSSLUG00000018068) #23	ENTPD7 (ENSSLUG00000018103) #24	ENSSLUG00000018615	atpv0e2 (ENSSLUG00000018619)	ENSSLUG00000018624	ENSSLUG00000018630	ENSSLUG00000018636	ENSSLUG00000018656	ENSSLUG00000018665
Cottioidei	ANCESTRAL SPECIES	40	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000156644.e.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000177979	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A	ENSGT00900000141021.b.b.f	ENSGT00940000166436	ENSGT00940000159327.u.b	ENSGT00530000063646.b	ENSGT01030000234638.b.a.a
Lumpfish	MODERN SPECIES		ENSCLMG00005002319	lgsn (ENSCLMG00005002320)	ENSCLMG00005002321	myom2a (ENSCLMG00005002326)	ENSCLMG00005003322	ENSCLMG00005007822	ENSCLMG00005007826	ARHGAP19 (ENSCLMG00005007827)	slit1b (ENSCLMG00005007864)	ENSCLMG00005009871	ENSCLMG00005009875	hoga1 (ENSCLMG00005009876)	CNNM1 (ENSCLMG00005009877) #20	GOT1 (ENSCLMG00005009878) ##21	ENSCLMG00005009890	NKX2-3 (ENSCLMG00005009891) #22	SLC25A28 (ENSCLMG00005009893) #23	ENTPD7 (ENSCLMG00005009896) #24	atpv0e2 (ENSCLMG00005010358)	ENSCLMG00005010360	ENSCLMG00005010363	ENSCLMG00005010367	ENSCLMG00005010370	ENSCLMG00005010371	ENSCLMG00005010372	ENSCLMG00005010373	c3b.2 (ENSCLMG00005010374)	ENSCLMG00005010375	yju2b (ENSCLMG00005010376)	gtf3aa (ENSCLMG00005010377)	PSPN (ENSCLMG00005010378)
Eupecaria_C	ANCESTRAL SPECIES	14	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b.l	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT00990000203852	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.b	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A	ENSGT00900000141021.b.b.f
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	13	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.b.b	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A
European seabass	MODERN SPECIES	20	ENSDLAG00005032061	ENSDLAG00005031947	ENSDLAG00005019514	nup133 (ENSDLAG00005019343)	taf5l (ENSDLAG00005019329)	capn9 (ENSDLAG00005018075)	ENSDLAG00005018035	ENSDLAG00005017913	ENSDLAG00005017905	ltv1 (ENSDLAG00005017941)	ENSDLAG00005026547	cct4 (ENSDLAG00005015352)	pus10 (ENSDLAG00005027536)	ENSDLAG00005015337	ENSDLAG00005015336	ENSDLAG00005034477 #22	ENSDLAG00005029700 #23	ENSDLAG00005014294 #24	ENSDLAG00005033976	ENSDLAG00005014185	ENSDLAG00005032350	ENSDLAG00005004109	ENSDLAG00005015376	ENSDLAG00005017294	ENSDLAG00005015314	ENSDLAG00005030661	ENSDLAG00005017373	ENSDLAG00005011162	ENSDLAG00005033947	ENSDLAG00005031544	EPB41L3 (ENSDLAG00005034082)
Large yellow croaker	MODERN SPECIES	481	ENSLCRG00005014304	ENSLCRG00005014303	hk1 (ENSLCRG00005010263)	myom2a (ENSLCRG00005010193)	ENSLCRG00005010180	dla (ENSLCRG00005010176)	RHOU (ENSLCRG00005010174)	ENSLCRG00005010172	ARHGAP19 (ENSLCRG00005010166)	slit1b (ENSLCRG00005002787)	ENSLCRG00005023347	MORN4 (ENSLCRG00005023346) #7	hoga1 (ENSLCRG00005023344)	CNNM1 (ENSLCRG00005023342) #20	GOT1 (ENSLCRG00005023329) ##21	ENSLCRG00005023326 #22	slc25a28 (ENSLCRG00005023325) #23	ENTPD7 (ENSLCRG00005023168) #24	ENSLCRG00005023140	atpv0e2 (ENSLCRG00005023138)	ENSLCRG00005023137	ENSLCRG00005023134	ENSLCRG00005023133	ENSLCRG00005023129	ENSLCRG00005023127	ENSLCRG00005023123	ENSLCRG00005023121	ENSLCRG00005023117	c3b.2 (ENSLCRG00005023115)	yju2b (ENSLCRG00005023112)	ENSLCRG00005023111
Gilthead seabream	MODERN SPECIES		ENSSAUG00010013426	ENSSAUG00010013428	ENSSAUG00010013433	ENSSAUG00010013435	ENSSAUG00010013436	ENSSAUG00010013438	nipal4 (ENSSAUG00010013441)	ARHGAP19 (ENSSAUG00010013459)	slit1b (ENSSAUG00010013502)	MORN4 (ENSSAUG00010017715) #7	ENSSAUG00010017717	ENSSAUG00010017720	hoga1 (ENSSAUG00010017723)	CNNM1 (ENSSAUG00010017726) #20	GOT1 (ENSSAUG00010017731) ##21	NKX2-3 (ENSSAUG00010017737) #22	ENTPD7 (ENSSAUG00010017741) #24	ENSSAUG00010017898	atpv0e2 (ENSSAUG00010017902)	ENSSAUG00010017906	ENSSAUG00010017914	ENSSAUG00010017917	ENSSAUG00010017920	ENSSAUG00010017923	ENSSAUG00010017926	ENSSAUG00010000038	ENSSAUG00010000040	ENSSAUG00010000042	ENSSAUG00010000044	ENSSAUG00010000045	ENSSAUG00010000048
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT00990000203852	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b
Anabantaria	ANCESTRAL SPECIES	1	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b.l	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A	ENSGT00900000141021.b.b.f	ENSGT00940000166436
Zig-zag eel	MODERN SPECIES		ENSMAMG00000003221	ENSMAMG00000003394	ENSMAMG00000003468	ENSMAMG00000026171	ENSMAMG00000003346	ENSMAMG00000026370	ENSMAMG00000003461	ENSMAMG00000003158	slit1b (ENSMAMG00000003079)	ENSMAMG00000003066	ENSMAMG00000003048	ENSMAMG00000003013 #7	hoga1 (ENSMAMG00000002982)	ENSMAMG00000002885 #20	ENSMAMG00000002834 ##21	ENSMAMG00000002819 #22	ENSMAMG00000002678 #24	ENSMAMG00000002778	atpv0e2 (ENSMAMG00000027104)	ENSMAMG00000002408	ENSMAMG00000025764	ENSMAMG00000002460	ENSMAMG00000003537	ENSMAMG00000002278	ENSMAMG00000002345	ENSMAMG00000002242	ENSMAMG00000002332	ENSMAMG00000024926	ENSMAMG00000002198	ENSMAMG00000026924	ENSMAMG00000028223
Anabantoidei	ANCESTRAL SPECIES		ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A	ENSGT00900000141021.b.b.f	ENSGT00940000166436	ENSGT00940000159327.u.b
Climbing perch	MODERN SPECIES		lgsn (ENSATEG00000021753)	ENSATEG00000021763	myom2a (ENSATEG00000021776)	ENSATEG00000021839	ENSATEG00000021862	ENSATEG00000021885	ENSATEG00000021898	ENSATEG00000021914	ENSATEG00000021938	slit1b (ENSATEG00000021971)	ENSATEG00000022021	ENSATEG00000022028 #7	hoga1 (ENSATEG00000022037)	CNNM1 (ENSATEG00000022052) #20	GOT1 (ENSATEG00000022085) ##21	NKX2-3 (ENSATEG00000022096) #22	SLC25A28 (ENSATEG00000022106) #23	ENTPD7 (ENSATEG00000025313) #24	ENSATEG00000022142	atpv0e2 (ENSATEG00000022155)	ENSATEG00000022160	ENSATEG00000022174	ENSATEG00000001122	ENSATEG00000000496	ENSATEG00000000027	ENSATEG00000000188	ENSATEG00000025955	ENSATEG00000000771	ENSATEG00000000209	ENSATEG00000000348	ENSATEG00000026491
Siamese fighting fish	MODERN SPECIES		ptp4a1 (ENSBSLG00000004953)	lgsn (ENSBSLG00000005047)	ENSBSLG00000005104	myom2a (ENSBSLG00000005201)	hk1 (ENSBSLG00000006755)	ENSBSLG00000007532	dla (ENSBSLG00000007537)	ENSBSLG00000007551	ENSBSLG00000004956	slit1b (ENSBSLG00000005052)	ENSBSLG00000006317	MORN4 (ENSBSLG00000006339) #7	hoga1 (ENSBSLG00000006434)	CNNM1 (ENSBSLG00000006707) #20	GOT1 (ENSBSLG00000006808) ##21	NKX2-3 (ENSBSLG00000007044) #22	slc25a28 (ENSBSLG00000007054) #23	ENTPD7 (ENSBSLG00000007064) #24	ENSBSLG00000007135	atpv0e2 (ENSBSLG00000007148)	ENSBSLG00000007733	ENSBSLG00000007772	ENSBSLG00000007863	ENSBSLG00000007848	c3b.2 (ENSBSLG00000007904)	yju2b (ENSBSLG00000008118)	ENSBSLG00000008132	ENSBSLG00000008135	wdr83 (ENSBSLG00000008143)	ENSBSLG00000008202	ENSBSLG00000008208
Carangaria	ANCESTRAL SPECIES		ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT00990000203852	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A
Carangaria_A	ANCESTRAL SPECIES	14	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT00990000203852	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A
Seriola	ANCESTRAL SPECIES	154								ENSGT00940000157525.a #20	ENSGT00530000063604.A	ENSGT00730000111173.h #7	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a	ENSGT00940000157322.b.b	ENSGT00940000157331.b.a	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c.a #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a
Greater amberjack	MODERN SPECIES	156	myom2a (ENSSDUG00000013571)	ENSSDUG00000013627	lgsn (ENSSDUG00000013633)	ptp4a1 (ENSSDUG00000013652)	ENSSDUG00000013671	ENSSDUG00000013679	ENSSDUG00000013687	CNNM1 (ENSSDUG00000013708) #20	hoga1 (ENSSDUG00000013736)	MORN4 (ENSSDUG00000013760) #7	ENSSDUG00000013787	ENSSDUG00000013796	slit1b (ENSSDUG00000013813)	ARHGAP19 (ENSSDUG00000013857)	GOT1 (ENSSDUG00000013881) ##21	ENSSDUG00000013901 #22	slc25a28 (ENSSDUG00000013940) #23	ENTPD7 (ENSSDUG00000013958) #24	ENSSDUG00000014002	atpv0e2 (ENSSDUG00000014014)	ENSSDUG00000014026	ENSSDUG00000014045
Yellowtail amberjack	MODERN SPECIES	2775															GOT1 (ENSSLDG00000012764) ##21	ENSSLDG00000012749 #22	slc25a28 (ENSSLDG00000012721) #23	ENTPD7 (ENSSLDG00000012644) #24
Barramundi perch	MODERN SPECIES	167	lgsn (ENSLCAG00010019964)	ENSLCAG00010019958	myom2a (ENSLCAG00010019470)	hk1 (ENSLCAG00010018183)	ENSLCAG00010017985	dla (ENSLCAG00010017982)	ENSLCAG00010017981	ENSLCAG00010017979	ARHGAP19 (ENSLCAG00010017975)	slit1b (ENSLCAG00010017878)	ENSLCAG00010017832	MORN4 (ENSLCAG00010017826) #7	hoga1 (ENSLCAG00010017823)	CNNM1 (ENSLCAG00010017811) #20	GOT1 (ENSLCAG00010017785) ##21	NKX2-3 (ENSLCAG00010017780) #22	slc25a28 (ENSLCAG00010017778) #23	ENTPD7 (ENSLCAG00010017632) #24	ENSLCAG00010017607	atpv0e2 (ENSLCAG00010017603)	ENSLCAG00010017594	ENSLCAG00010017571	ENSLCAG00010017553	ENSLCAG00010017543	ENSLCAG00010017537	ENSLCAG00010017524	ENSLCAG00010017505	c3b.2 (ENSLCAG00010017407)	yju2b (ENSLCAG00010017369)	gtf3aa (ENSLCAG00010017366)	PSPN (ENSLCAG00010017363)
Pleuronectoidei	ANCESTRAL SPECIES	26	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A	ENSGT00900000141021.b.b.f	ENSGT00940000166436
Turbot	MODERN SPECIES	20	lgsn (ENSSMAG00000021115)	ENSSMAG00000021114	myom2a (ENSSMAG00000021113)	ENSSMAG00000021112	ENSSMAG00000021111	ENSSMAG00000021110	ENSSMAG00000030106	ENSSMAG00000021108	slit1b (ENSSMAG00000021107)	ENSSMAG00000021106	ENSSMAG00000035022	ENSSMAG00000032297	hoga1 (ENSSMAG00000035315)	CNNM1 (ENSSMAG00000021103) #20	GOT1 (ENSSMAG00000021101) ##21	NKX2-3 (ENSSMAG00000021102) #22	SLC25A28 (ENSSMAG00000021100) #23	ENTPD7 (ENSSMAG00000021099) #24	ENSSMAG00000021098	ENSSMAG00000037881	ENSSMAG00000021096	ENSSMAG00000021124	ENSSMAG00000021125	ENSSMAG00000033985	ENSSMAG00000035482	c3b.2 (ENSSMAG00000021126)	yju2b (ENSSMAG00000021128)	ENSSMAG00000021129	ENSSMAG00000025695	wdr83 (ENSSMAG00000021130)	wdr83os (ENSSMAG00000021131)
Tongue sole	MODERN SPECIES	19	nptxrb (ENSCSEG00000020838)	dnal4b (ENSCSEG00000020837)	ENSCSEG00000020836	baiap2l2b (ENSCSEG00000020835)	pvalb7 (ENSCSEG00000020834)	ncf4 (ENSCSEG00000020833)	ENSCSEG00000020832	ENSCSEG00000020831	ENSCSEG00000020830	MORN4 (ENSCSEG00000020829) #7	hoga1 (ENSCSEG00000020828)	CNNM1 (ENSCSEG00000020827) #20	ENSCSEG00000020826	GOT1 (ENSCSEG00000020824) ##21	ENSCSEG00000020823	NKX2-3 (ENSCSEG00000020822) #22	slc25a28 (ENSCSEG00000020821) #23	ENTPD7 (ENSCSEG00000020819) #24	ENSCSEG00000020816	atpv0e2 (ENSCSEG00000020814)	ENSCSEG00000020807	ENSCSEG00000020803	c3b.2 (ENSCSEG00000020797)	GTF3A (ENSCSEG00000020796)	ENSCSEG00000020795	wdr83 (ENSCSEG00000020790)	wdr83os (ENSCSEG00000020788)	cacna1ab (ENSCSEG00000020769)	ier2b (ENSCSEG00000020767)	cyp2p7 (ENSCSEG00000020763)	cyp2ad3 (ENSCSEG00000020762)
Ovalentaria	ANCESTRAL SPECIES		ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A
Pomacentridae	ANCESTRAL SPECIES	67	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a
Pomacentridae_A	ANCESTRAL SPECIES	151	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a.c	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a
Amphiprion	ANCESTRAL SPECIES		ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.a.b	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a.c	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.a.b.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a
Clown anemonefish	MODERN SPECIES	725																NKX2-3 (ENSAOCG00000003691) #22	slc25a28 (ENSAOCG00000003701) #23	ENTPD7 (ENSAOCG00000003719) #24	ENSAOCG00000003726	atpv0e2 (ENSAOCG00000003732)	ENSAOCG00000003736	ENSAOCG00000003759	ENSAOCG00000003765	ENSAOCG00000003801	ENSAOCG00000003806	ENSAOCG00000003824	ENSAOCG00000000102	ENSAOCG00000003834	ENSAOCG00000003837	ENSAOCG00000003855	ENSAOCG00000003858
Orange clownfish	MODERN SPECIES	17	ENSAPEG00000010819	myom2a (ENSAPEG00000010774)	hk1 (ENSAPEG00000010727)	ENSAPEG00000010678	dla (ENSAPEG00000010614)	RHOU (ENSAPEG00000010570)	ENSAPEG00000010539	ARHGAP19 (ENSAPEG00000010451)	slit1b (ENSAPEG00000010303)	ENSAPEG00000010271	ENSAPEG00000010248	MORN4 (ENSAPEG00000010232) #7	hoga1 (ENSAPEG00000010201)	CNNM1 (ENSAPEG00000010118) #20	GOT1 (ENSAPEG00000010068) ##21	NKX2-3 (ENSAPEG00000010041) #22	slc25a28 (ENSAPEG00000010021) #23	ENTPD7 (ENSAPEG00000009967) #24	ENSAPEG00000009939	atpv0e2 (ENSAPEG00000009922)	ENSAPEG00000009897	ENSAPEG00000009860	ENSAPEG00000009727	ENSAPEG00000009706	ENSAPEG00000009594	ENSAPEG00000009448	ENSAPEG00000009324	ENSAPEG00000009288	ENSAPEG00000009117	ENSAPEG00000008978	ENSAPEG00000008854
Spiny chromis	MODERN SPECIES	790														CNNM1 (ENSAPOG00000008709) #20	GOT1 (ENSAPOG00000008700) ##21	NKX2-3 (ENSAPOG00000008652) #22	slc25a28 (ENSAPOG00000008627) #23	ENTPD7 (ENSAPOG00000008613) #24	ENSAPOG00000008503	atpv0e2 (ENSAPOG00000008459)	ENSAPOG00000001034	ENSAPOG00000008424
Bicolor damselfish	MODERN SPECIES	2239															GOT1 (ENSSPAG00000019993) ##21	NKX2-3 (ENSSPAG00000020008) #22	slc25a28 (ENSSPAG00000020016) #23	ENTPD7 (ENSSPAG00000020024) #24
Cichlidae	ANCESTRAL SPECIES	3	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a.a.a.a.a	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a.a.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT00990000203852.a.a.a	ENSGT00990000203852.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a.a.a.a.a.a	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a.a.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b.c	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT00940000154063.C.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	33	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b.c	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A
Haplochromini	ANCESTRAL SPECIES	45	ENSGT00940000157889.g.b	ENSGT00940000157057.e.c	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b.c	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A
Burton s mouthbrooder	MODERN SPECIES	546	ptp4a1 (ENSHBUG00000016172)	lgsn (ENSHBUG00000016181)	myom2a (ENSHBUG00000016197)	hk1 (ENSHBUG00000016275)	ENSHBUG00000016325	dla (ENSHBUG00000016370)	ENSHBUG00000016386	ARHGAP19 (ENSHBUG00000016400)	slit1b (ENSHBUG00000016427)	ENSHBUG00000016442	MORN4 (ENSHBUG00000016465) #7	ENSHBUG00000016469	hoga1 (ENSHBUG00000016549)	CNNM1 (ENSHBUG00000001140) #20	GOT1 (ENSHBUG00000016598) ##21	ENSHBUG00000016604 #22	slc25a28 (ENSHBUG00000016611) #23	ENTPD7 (ENSHBUG00000001004) #24	ENSHBUG00000016686	atpv0e2 (ENSHBUG00000016705)	ENSHBUG00000016720	ENSHBUG00000016738	ENSHBUG00000016759	ENSHBUG00000016827	ENSHBUG00000016855	ENSHBUG00000016894
Haplochromini_A	ANCESTRAL SPECIES	50	ENSGT00940000157889.g.b	ENSGT00940000157057.e.c	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b.c	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A
P. nyererei	MODERN SPECIES	545	lgsn (ENSPNYG00000001618)	myom2a (ENSPNYG00000001345)	hk1 (ENSPNYG00000001261)	ENSPNYG00000001220	dla (ENSPNYG00000001178)	ENSPNYG00000001159	ARHGAP19 (ENSPNYG00000001117)	ENSPNYG00000001078	ENSPNYG00000001049	ENSPNYG00000001040	ENSPNYG00000001023	MORN4 (ENSPNYG00000000991) #7	hoga1 (ENSPNYG00000000964)	CNNM1 (ENSPNYG00000000875) #20	GOT1 (ENSPNYG00000000824) ##21	ENSPNYG00000023327 #22	slc25a28 (ENSPNYG00000023323) #23	ENTPD7 (ENSPNYG00000023316) #24	ENSPNYG00000023311	atpv0e2 (ENSPNYG00000023307)	ENSPNYG00000023304	ENSPNYG00000023300	ENSPNYG00000023297	ENSPNYG00000023292	ENSPNYG00000023286
Haplochromini_B	ANCESTRAL SPECIES	93	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e.c	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.b	ENSGT01030000234576.D.a.b.a.a.a.b.c.b	ENSGT00980000198884.e.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.b.c	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.a.b.b.b	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.b.a.b.b.a	ENSGT00390000013764.ab.a.a.a.a
Eastern happy	MODERN SPECIES	18	lgsn (ENSACLG00000011199)	ENSACLG00000011207	myom2a (ENSACLG00000011219)	hk1 (ENSACLG00000011311)	ENSACLG00000011491	dla (ENSACLG00000011496)	ENSACLG00000011506	ARHGAP19 (ENSACLG00000011516)	slit1b (ENSACLG00000011523)	ENSACLG00000011857	MORN4 (ENSACLG00000011891) #7	hoga1 (ENSACLG00000011903)	ENSACLG00000012019	CNNM1 (ENSACLG00000012030) #20	GOT1 (ENSACLG00000012047) ##21	ENSACLG00000012108 #22	slc25a28 (ENSACLG00000012120) #23	ENTPD7 (ENSACLG00000012169) #24	ENSACLG00000012247	atpv0e2 (ENSACLG00000012310)	ENSACLG00000012346	ENSACLG00000012384	ENSACLG00000012414	ENSACLG00000012421	ENSACLG00000012449	ENSACLG00000012471	ENSACLG00000012475	ENSACLG00000012482	ENSACLG00000012490	ENSACLG00000012526	ENSACLG00000012595
Zebra mbuna	MODERN SPECIES	1109	wdr83os (ENSMZEG00005014409)	cacna1ab (ENSMZEG00005014424)	ier2b (ENSMZEG00005014461)	stx10 (ENSMZEG00005014469)	NACC1 (ENSMZEG00005014477)	TRMT1 (ENSMZEG00005014510)	man2b1 (ENSMZEG00005014523)	ENSMZEG00005014534	slit1b (ENSMZEG00005014549)	ENSMZEG00005014560	MORN4 (ENSMZEG00005014565) #7	hoga1 (ENSMZEG00005014595)	ENSMZEG00005014604	CNNM1 (ENSMZEG00005014619) #20	GOT1 (ENSMZEG00005014631) ##21	ENSMZEG00005014660 #22	slc25a28 (ENSMZEG00005014676) #23	ENTPD7 (ENSMZEG00005014689) #24	ENSMZEG00005014712	atpv0e2 (ENSMZEG00005014731)	ENSMZEG00005014740	ENSMZEG00005014750	ENSMZEG00005014762	ENSMZEG00005014770	ENSMZEG00005014776	ENSMZEG00005014782	ENSMZEG00005014815	ENSMZEG00005014819	ENSMZEG00005014834	ENSMZEG00005014843	ENSMZEG00005014851
Lyretail cichlid	MODERN SPECIES	443	ptp4a1 (ENSNBRG00000004831)	lgsn (ENSNBRG00000004858)	ENSNBRG00000004865	myom2a (ENSNBRG00000004940)	hk1 (ENSNBRG00000005272)	ENSNBRG00000005305	dla (ENSNBRG00000005342)	RHOU (ENSNBRG00000005470)	ARHGAP19 (ENSNBRG00000005483)	slit1b (ENSNBRG00000005548)	ENSNBRG00000006539	ENSNBRG00000006555	hoga1 (ENSNBRG00000006578)	CNNM1 (ENSNBRG00000006620) #20	GOT1 (ENSNBRG00000006678) ##21	NKX2-3 (ENSNBRG00000006711) #22	slc25a28 (ENSNBRG00000006726) #23	ENTPD7 (ENSNBRG00000006756) #24	ENSNBRG00000006788	atpv0e2 (ENSNBRG00000006796)	ENSNBRG00000006809	ENSNBRG00000006833
Nile tilapia	MODERN SPECIES	18	hk1 (ENSONIG00000000186)	ENSONIG00000036388	ENSONIG00000031890	dla (ENSONIG00000000194)	ENSONIG00000000197	ARHGAP19 (ENSONIG00000032271)	slit1b (ENSONIG00000000202)	ENSONIG00000035807	ENSONIG00000000255	ENSONIG00000037769	MORN4 (ENSONIG00000000257) #7	hoga1 (ENSONIG00000000262)	ENSONIG00000040013	CNNM1 (ENSONIG00000000264) #20	GOT1 (ENSONIG00000000268) ##21	ENSONIG00000033805 #22	slc25a28 (ENSONIG00000000285) #23	ENTPD7 (ENSONIG00000000286) #24	ENSONIG00000000294	atpv0e2 (ENSONIG00000038259)	ENSONIG00000000297	ENSONIG00000000299	ENSONIG00000040357	ENSONIG00000033100	ENSONIG00000035631	ENSONIG00000035635	ENSONIG00000029800	ENSONIG00000034419	ENSONIG00000031539	ENSONIG00000030067	ENSONIG00000000301
Midas cichlid	MODERN SPECIES	119									slit1b (ENSACIG00000020470)	ENSACIG00000020408	ENSACIG00000020394	ENSACIG00000020373	hoga1 (ENSACIG00000020356)	CNNM1 (ENSACIG00000020322) #20	GOT1 (ENSACIG00000020304) ##21	ENSACIG00000020288 #22	slc25a28 (ENSACIG00000020125) #23	ENTPD7 (ENSACIG00000020089) #24	atpv0e2 (ENSACIG00000020077)
Atherinomorphae	ANCESTRAL SPECIES	46	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a
Cyprinodontiformes	ANCESTRAL SPECIES	18	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b.d	ENSGT00940000154063.C.a.b	ENSGT00390000002789	ENSGT00940000177040	ENSGT00530000067736	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659
Cyprinodontoidei	ANCESTRAL SPECIES	41	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b.d	ENSGT00940000154063.C.a.b	ENSGT00390000002789	ENSGT00940000177040	ENSGT00530000067736	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659
NAME_4	ANCESTRAL SPECIES	74	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000180052	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.b.d	ENSGT00390000002789	ENSGT00940000177040	ENSGT00530000067736	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878
Sheepshead minnow	MODERN SPECIES	157									slit1b (ENSCVAG00000002864)	ENSCVAG00000002875	ENSCVAG00000002883	ENSCVAG00000002887	hoga1 (ENSCVAG00000002898)	CNNM1 (ENSCVAG00000002925) #20	GOT1 (ENSCVAG00000002950) ##21	ENSCVAG00000002952 #22	slc25a28 (ENSCVAG00000002979) #23	ENTPD7 (ENSCVAG00000002999) #24	ENSCVAG00000003007	atpv0e2 (ENSCVAG00000003019)	ENSCVAG00000003029	ENSCVAG00000003039	ENSCVAG00000000742	ENSCVAG00000003059	ENSCVAG00000003076	XCR1 (ENSCVAG00000003080)	ENSCVAG00000003099	ENSCVAG00000003149	ENSCVAG00000003169	ENSCVAG00000000101	uqcrh (ENSCVAG00000000103)
Mummichog	MODERN SPECIES	2270	lgsn (ENSFHEG00000003054)	ENSFHEG00000003030	myom2a (ENSFHEG00000003011)	hk1 (ENSFHEG00000002913)	ENSFHEG00000002870	dla (ENSFHEG00000002839)	ENSFHEG00000002822	ARHGAP19 (ENSFHEG00000002810)	slit1b (ENSFHEG00000002796)	ENSFHEG00000002734	ENSFHEG00000002691	ENSFHEG00000002684	hoga1 (ENSFHEG00000002680)	CNNM1 (ENSFHEG00000002668) #20	GOT1 (ENSFHEG00000002621) ##21	ENSFHEG00000002607 #22	slc25a28 (ENSFHEG00000002603) #23	ENTPD7 (ENSFHEG00000002586) #24	ENSFHEG00000002561	atpv0e2 (ENSFHEG00000002546)	ltv1 (ENSFHEG00000002538)	ENSFHEG00000002510	ifngr1 (ENSFHEG00000002503)	ENSFHEG00000002501	pus10 (ENSFHEG00000002475)	cct4 (ENSFHEG00000002454)	FAM161A (ENSFHEG00000002424)	XPO1 (ENSFHEG00000002412)	USP34 (ENSFHEG00000002359)	commd1 (ENSFHEG00000002285)	b3gnt2a (ENSFHEG00000002280)
Poeciliinae	ANCESTRAL SPECIES	9	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00390000002789	ENSGT00940000177040	ENSGT00530000067736	ENSGT00940000179314	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659
Poecilia	ANCESTRAL SPECIES	6	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT00940000179314	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659
NAME_6	ANCESTRAL SPECIES	278							ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736
Sailfin molly	MODERN SPECIES	304												MORN4 (ENSPLAG00000022204) #7	hoga1 (ENSPLAG00000022226)	CNNM1 (ENSPLAG00000022295) #20	GOT1 (ENSPLAG00000022323) ##21	NKX2-3 (ENSPLAG00000022341) #22	slc25a28 (ENSPLAG00000022373) #23	ENTPD7 (ENSPLAG00000022413) #24	ENSPLAG00000022424	atpv0e2 (ENSPLAG00000022437)	ENSPLAG00000022455	ENSPLAG00000000476	ltv1 (ENSPLAG00000022522)	ifngr1 (ENSPLAG00000022526)
Amazon molly	MODERN SPECIES	638							dla (ENSPFOG00000010460)	RHOU (ENSPFOG00000010445)	ENSPFOG00000010443	slit1b (ENSPFOG00000010003)	ENSPFOG00000009902	MORN4 (ENSPFOG00000009871) #7	hoga1 (ENSPFOG00000009760)	CNNM1 (ENSPFOG00000009603) #20	GOT1 (ENSPFOG00000009462) ##21	ENSPFOG00000009440 #22	slc25a28 (ENSPFOG00000009401) #23	ENTPD7 (ENSPFOG00000009283) #24	ENSPFOG00000023708	ENSPFOG00000009234	ltv1 (ENSPFOG00000009122)	ifngr1 (ENSPFOG00000009105)	ENSPFOG00000024754
Guppy	MODERN SPECIES	439	lgsn (ENSPREG00000021552)	ENSPREG00000021538	myom2a (ENSPREG00000021506)	hk1 (ENSPREG00000021465)	ENSPREG00000021438	dla (ENSPREG00000021420)	ENSPREG00000021405	ARHGAP19 (ENSPREG00000021370)	slit1b (ENSPREG00000021322)	ENSPREG00000021295	ENSPREG00000021280	MORN4 (ENSPREG00000021271) #7	hoga1 (ENSPREG00000021261)	CNNM1 (ENSPREG00000021245) #20	GOT1 (ENSPREG00000021211) ##21	ENSPREG00000021187 #22	slc25a28 (ENSPREG00000021174) #23	ENTPD7 (ENSPREG00000021157) #24	ENSPREG00000021136	atpv0e2 (ENSPREG00000021108)	ENSPREG00000021081	ENSPREG00000021067	ltv1 (ENSPREG00000021028)	ifngr1 (ENSPREG00000020996)	ENSPREG00000020980	ENSPREG00000020952	pus10 (ENSPREG00000020908)	cct4 (ENSPREG00000020867)	FAM161A (ENSPREG00000020846)	XPO1 (ENSPREG00000020796)	USP34 (ENSPREG00000020616)
Platyfish	MODERN SPECIES	19	ptp4a1 (ENSXMAG00000014405)	lgsn (ENSXMAG00000014412)	ENSXMAG00000014414	myom2a (ENSXMAG00000014415)	hk1 (ENSXMAG00000008211)	ENSXMAG00000014452	dla (ENSXMAG00000014461)	ENSXMAG00000030012	ENSXMAG00000014472	slit1b (ENSXMAG00000014475)	ENSXMAG00000027531	MORN4 (ENSXMAG00000005648) #7	hoga1 (ENSXMAG00000005650)	CNNM1 (ENSXMAG00000005657) #20	GOT1 (ENSXMAG00000005669) ##21	NKX2-3 (ENSXMAG00000022448) #22	slc25a28 (ENSXMAG00000005681) #23	ENTPD7 (ENSXMAG00000005683) #24	ENSXMAG00000021763	atpv0e2 (ENSXMAG00000027815)	ENSXMAG00000005708	ltv1 (ENSXMAG00000029822)	ENSXMAG00000029535	ifngr1 (ENSXMAG00000005709)	ENSXMAG00000028107	ENSXMAG00000016020	pus10 (ENSXMAG00000005729)	cct4 (ENSXMAG00000005750)	FAM161A (ENSXMAG00000005787)	XPO1 (ENSXMAG00000005790)	USP34 (ENSXMAG00000005819)
Aplocheiloidei	ANCESTRAL SPECIES	81	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000180052	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT00940000179314	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659
Turquoise killifish	MODERN SPECIES	1617	lgsn (ENSNFUG00015004590)	ENSNFUG00015004602	myom2a (ENSNFUG00015004624)	hk1 (ENSNFUG00015005439)	ZBTB45 (ENSNFUG00015009939)	DLA (ENSNFUG00015009959)	ENSNFUG00015009984	slit1b (ENSNFUG00015010091)	ENSNFUG00015010906	ENSNFUG00015010916	ENSNFUG00015010919	ENSNFUG00015010928	hoga1 (ENSNFUG00015010952)	CNNM1 (ENSNFUG00015011166) #20	GOT1 (ENSNFUG00015011190) ##21	NKX2-3 (ENSNFUG00015011235) #22	SLC25A28 (ENSNFUG00015011246) #23	ENSNFUG00015011257	ENTPD7 (ENSNFUG00015011274) #24	CREBRF (ENSNFUG00015011320)	atpv0e2 (ENSNFUG00015011330)	HYLS1 (ENSNFUG00015011348)	ccdc3b (ENSNFUG00015011363)	ZGMRPL4 (ENSNFUG00015011372)	ENSNFUG00015011456	mrpl21 (ENSNFUG00015011963)	C11H6ORF120 (ENSNFUG00015011970)	npepps (ENSNFUG00015012030)	MRPL45 (ENSNFUG00015012866)	ENSNFUG00015012876	socs7 (ENSNFUG00015012904)
Oryzias	ANCESTRAL SPECIES	34	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01070000253760.b.a.a.a.b.a.a.a.b.b	ENSGT01020000230351.B.j.a	ENSGT00390000005096	ENSGT00940000165861	ENSGT00940000153576.c.a.a.b	ENSGT00940000156001.c	ENSGT00390000003751.a	ENSGT00940000157807.g.b	ENSGT01100000263483.E.b.b	ENSGT00390000008711.h	ENSGT00390000013973.A.a.c.b.a
Oryzias_a	ANCESTRAL SPECIES	59	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01070000253760.b.a.a.a.b.a.a.a.b.b	ENSGT01020000230351.B.j.a	ENSGT00390000005096	ENSGT00940000165861	ENSGT00940000153576.c.a.a.b	ENSGT00940000156001.c	ENSGT00390000003751.a	ENSGT00940000157807.g.b	ENSGT00390000008711.h	ENSGT00390000013973.A.a.c.b.a	ENSGT00730000111690.B.g
Chinese medaka	MODERN SPECIES	1299															GOT1 (ENSOSIG00000023631) ##21	NKX2-3 (ENSOSIG00000023633) #22
Japanese Medaka HdrR	MODERN SPECIES		ENSORLG00000000078	myom2a (ENSORLG00000000075)	HK1 (ENSORLG00000000069)	ENSORLG00000026423	dla (ENSORLG00000027625)	ENSORLG00000000064	ARHGAP19 (ENSORLG00000000062)	ENSORLG00000000055	ENSORLG00000027690	ENSORLG00000027792	ENSORLG00000000044	ENSORLG00000000043 #7	hoga1 (ENSORLG00000000039)	CNNM1 (ENSORLG00000000036) #20	GOT1 (ENSORLG00000000031) ##21	NKX2-3 (ENSORLG00000024332) #22	SLC25A28 (ENSORLG00000023276) #23	ENTPD7 (ENSORLG00000000027) #24	ENSORLG00000027950	atpv0e2 (ENSORLG00000021962)	ENSORLG00000026321	ENSORLG00000000170	ENSORLG00000023024	ENSORLG00000028345	ENSORLG00000025490	ENSORLG00000022956	ENSORLG00000028817	ENSORLG00000000870	ENSORLG00000028506	ENSORLG00000023088	ENSORLG00000000016
Oryzias_b	ANCESTRAL SPECIES	36	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h #7	ENSGT00530000063604.A	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01070000253760.b.a.a.a.b.a.a.a.b.b	ENSGT01020000230351.B.j.a	ENSGT00390000005096	ENSGT00940000165861	ENSGT00940000153576.c.a.a.b	ENSGT00940000156001.c	ENSGT00390000003751.a	ENSGT00940000157807.g.b	ENSGT01100000263483.E.b.b.u	ENSGT00390000008711.h	ENSGT00390000013973.A.a.c.b.a
Indian medaka	MODERN SPECIES	21	ptp4a1 (ENSOMEG00000010915)	lgsn (ENSOMEG00000010937)	ENSOMEG00000010956	myom2a (ENSOMEG00000000267)	hk1 (ENSOMEG00000011203)	ENSOMEG00000011246	dla (ENSOMEG00000011280)	ENSOMEG00000011304	ARHGAP19 (ENSOMEG00000011381)	ENSOMEG00000011408	ENSOMEG00000011452	MORN4 (ENSOMEG00000011473) #7	hoga1 (ENSOMEG00000011497)	CNNM1 (ENSOMEG00000011514) #20	GOT1 (ENSOMEG00000011541) ##21	NKX2-3 (ENSOMEG00000011553) #22	slc25a28 (ENSOMEG00000011564) #23	ENTPD7 (ENSOMEG00000011604) #24	ENSOMEG00000011680	atpv0e2 (ENSOMEG00000011709)	ENSOMEG00000011724	p2rx3b (ENSOMEG00000011735)	ENSOMEG00000011745	ENSOMEG00000011794	slc43a1b (ENSOMEG00000000831)	zdhhc5a (ENSOMEG00000011842)	tmx2b (ENSOMEG00000011893)	ENSOMEG00000011938	ENSOMEG00000011970	ENSOMEG00000012007	SAMD9 (ENSOMEG00000012021)
Javanese ricefish	MODERN SPECIES		ENSOJAG00000000536	ptp4a1 (ENSOJAG00000000548)	lgsn (ENSOJAG00000000560)	ENSOJAG00000000571	hk1 (ENSOJAG00000000858)	ENSOJAG00000001402	ENSOJAG00000001408	dla (ENSOJAG00000001417)	ENSOJAG00000001428	ARHGAP19 (ENSOJAG00000001434)	ENSOJAG00000002037	ENSOJAG00000002057	hoga1 (ENSOJAG00000002081)	CNNM1 (ENSOJAG00000002100) #20	GOT1 (ENSOJAG00000002129) ##21	NKX2-3 (ENSOJAG00000002162) #22	slc25a28 (ENSOJAG00000002173) #23	ENTPD7 (ENSOJAG00000002194) #24	ENSOJAG00000002382	ENSOJAG00000002391	atpv0e2 (ENSOJAG00000002403)	ENSOJAG00000002411	p2rx3b (ENSOJAG00000002428)	pold4 (ENSOJAG00000002520)	ENSOJAG00000002651	slc43a1b (ENSOJAG00000003198)	tmx2b (ENSOJAG00000003235)	TESK1 (ENSOJAG00000003257)	ENSOJAG00000003385	ENSOJAG00000003437	ENSOJAG00000003445
Pinecone sodierfish	MODERN SPECIES		ENSMMDG00005021483	ENSMMDG00005021484	ENSMMDG00005021486	ENSMMDG00005021488	ENSMMDG00005021489	ENSMMDG00005021491	ENSMMDG00005021493	ARHGAP19 (ENSMMDG00005021496)	slit1b (ENSMMDG00005021592)	ENSMMDG00005000070	ENSMMDG00005000072	ENSMMDG00005000073	hoga1 (ENSMMDG00005000074)	CNNM1 (ENSMMDG00005000075) #20	GOT1 (ENSMMDG00005000079) ##21	ENSMMDG00005000092 #22	slc25a28 (ENSMMDG00005000099) #23	ENTPD7 (ENSMMDG00005000226) #24	ENSMMDG00005000550	ENSMMDG00005000554	atpv0e2 (ENSMMDG00005000559)	ENSMMDG00005000566	ENSMMDG00005000571	ENSMMDG00005000578	ENSMMDG00005000581	ENSMMDG00005000584	ENSMMDG00005000586	c3b.2 (ENSMMDG00005000596)	yju2b (ENSMMDG00005000612)	gtf3aa (ENSMMDG00005000618)	PSPN (ENSMMDG00005000622)
Cod	MODERN SPECIES	16	TBC1D9 (ENSGMOG00000003147)	cldnd1b (ENSGMOG00000024776)	ENSGMOG00000007281	tacr3l (ENSGMOG00000007290)	ENSGMOG00000030643	ENSGMOG00000027990	ENSGMOG00000000581	slit1b (ENSGMOG00000024684)	ENSGMOG00000027132	ENSGMOG00000031324	ENSGMOG00000011889	ENSGMOG00000034450	hoga1 (ENSGMOG00000024220)	CNNM1 (ENSGMOG00000018366) #20	GOT1 (ENSGMOG00000011935) ##21	NKX2-3 (ENSGMOG00000023385) #22	SLC25A28 (ENSGMOG00000028850) #23	ENTPD7 (ENSGMOG00000011954) #24	ENSGMOG00000011963	atpv0e2 (ENSGMOG00000024703)	atf4a (ENSGMOG00000026369)	ENSGMOG00000018057	ENSGMOG00000026993	ENSGMOG00000018077	ENSGMOG00000029587	ENSGMOG00000018034	MGAT3 (ENSGMOG00000031946)	ENSGMOG00000034653	SYNGR1 (ENSGMOG00000023049)	ENSGMOG00000034303	cacng2b (ENSGMOG00000009126)
Protacanthopterygii	ANCESTRAL SPECIES	59								ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A.d	ENSGT00940000157525.a #20	ENSGT00950000183082.b.b.a.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d #23	ENSGT01100000263540.B.c #24	ENSGT00940000178559	ENSGT00530000063801.a.a	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774	ENSGT00510000046773.a.b.c.b	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00390000008221.a	ENSGT00510000048276	ENSGT01050000244893.c.a.b.j	ENSGT00870000136549	ENSGT00950000182935.B.b.c.g	ENSGT00390000017030.b.b
Salmoninae	ANCESTRAL SPECIES	14	ENSGT00950000183127.c.b.d.a.a.a.e.a	ENSGT00940000161847.b.a.e.a.b.b	ENSGT00950000183127.c.b.d.a.a.a.f	ENSGT00390000005639.a.b.d.b	ENSGT00390000002554	ENSGT00940000157798.b.e	ENSGT00970000194718.b.b.a.b.b	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a.b	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A.d.a	ENSGT00940000157525.a.d #20	ENSGT00950000183082.b.b.a.b.d.a.a ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d.c #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a.d	ENSGT00940000162476.d	ENSGT00940000161036.B.b.a	ENSGT00940000178559	ENSGT00530000063801.a.a	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774.f	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00940000167614.e.a	ENSGT00390000008221.a	ENSGT00510000048276.j	ENSGT00990000210255
Salmoninae_a	ANCESTRAL SPECIES	33	ENSGT00940000161847.b.a.e.a.b.b	ENSGT00950000183127.c.b.d.a.a.a.f	ENSGT00390000005639.a.b.d.b	ENSGT00390000002554	ENSGT00940000157798.b.e	ENSGT00970000194718.b.b.a.b.b	ENSGT01010000222294.c.b.b.b.c.a.a.a.b	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a.b	ENSGT00940000162611.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A.d.a	ENSGT00940000157525.a.d #20	ENSGT00950000183082.b.b.a.b.d.a.a ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d.c #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a.d	ENSGT00940000162476.d.a.a	ENSGT00940000178559	ENSGT00530000063801.a.a	ENSGT01030000234599.a.b.d.b.b.a.a	ENSGT00390000016774.f	ENSGT00510000046773.a.b.c.b	ENSGT00510000049239.a.d.b	ENSGT00940000160104.u.b	ENSGT00940000167614.e.a	ENSGT00390000008221.a	ENSGT00510000048276.i	ENSGT01050000244893.c.a.b.j.a.b
Salmo	ANCESTRAL SPECIES	244														ENSGT00940000157525.a.c #20	ENSGT00950000183082.b.b.a.b.c.b ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d.c #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a.d.c	ENSGT00940000162476.d.a.b	ENSGT01010000222294.c.b.b.b.c.a.b.b.a.a.a.b.a	ENSGT01010000222294.c.b.b.b.c.a.b.b.a.a.a.b.b.a	ENSGT00940000157367.a.b.c
River trout	DUPLICATION
River trout	MODERN SPECIES	31	ENSSTUG00000023136	ENSSTUG00000023149	ENSSTUG00000023166	ENSSTUG00000023226	ENSSTUG00000023250	ENSSTUG00000023292	ARHGAP19 (ENSSTUG00000023301)	slit1b (ENSSTUG00000023316)	slit1b (ENSSTUG00000023377)	ENSSTUG00000024787	MORN4 (ENSSTUG00000024798) #7	hoga1 (ENSSTUG00000024816)	CNNM1 (ENSSTUG00000024844) #20	GOT1 (ENSSTUG00000024918) ##21	ENSSTUG00000025006	NKX2-3 (ENSSTUG00000025013) #22	slc25a28 (ENSSTUG00000025021) #23	ENTPD7 (ENSSTUG00000025076) #24	ENSSTUG00000026439	atpv0e2 (ENSSTUG00000026458)	ENSSTUG00000026473	ENSSTUG00000026500	ENSSTUG00000026518	ENSSTUG00000026592	ENSSTUG00000026596	ENSSTUG00000026604	ENSSTUG00000026619	ENSSTUG00000026634	ENSSTUG00000026651	ENSSTUG00000026653	ENSSTUG00000026657
River trout	MODERN SPECIES	5	cant1b (ENSSTUG00000037894)	ENSSTUG00000037856	si:dkey-93h22.8 (ENSSTUG00000037850)	ENSSTUG00000037845	ENSSTUG00000037834	ENSSTUG00000037824	ldb1b (ENSSTUG00000037683)	KCNIP2 (ENSSTUG00000037663)	ENSSTUG00000037618	ARHGAP19 (ENSSTUG00000037598)	ENSSTUG00000037522	ENSSTUG00000037509	ENSSTUG00000037506 #7	ENSSTUG00000037495	GOT1 (ENSSTUG00000037417) ##21	NKX2-3 (ENSSTUG00000037406) #22	slc25a28 (ENSSTUG00000037398) #23	ENTPD7 (ENSSTUG00000037239) #24	ENSSTUG00000037216	ATP6V0E2 (ENSSTUG00000037198)	ENSSTUG00000037189	ENSSTUG00000037179	ENSSTUG00000037171	ENSSTUG00000037160	ENSSTUG00000037116	ENSSTUG00000037092	ENSSTUG00000037077	ENSSTUG00000037067	ENSSTUG00000037034	ENSSTUG00000036950	ENSSTUG00000036967
Atlantic salmon	MODERN SPECIES	3	ARMH3 (ENSSSAG00000009412)	ENSSSAG00000001426	ENSSSAG00000095336	ENSSSAG00000103983	ENSSSAG00000113084	ENSSSAG00000118680	ENSSSAG00000112597	ENSSSAG00000101021	ENSSSAG00000101980	ENSSSAG00000087263	ENSSSAG00000001073	ENSSSAG00000084650 #7	ENSSSAG00000085811	CNNM1 (ENSSSAG00000106882) #20	GOT1 (ENSSSAG00000001473) ##21	nkx23 (ENSSSAG00000008986) #22	SLC25A28 (ENSSSAG00000088969) #23	ENTPD7 (ENSSSAG00000001550) #24	ENSSSAG00000001850	ENSSSAG00000008837	ENSSSAG00000008855	ENSSSAG00000001428	ENSSSAG00000091144	ENSSSAG00000121712	ENSSSAG00000098351	ENSSSAG00000086889	ENSSSAG00000106934	ENSSSAG00000001943	ENSSSAG00000092591	ncf4 (ENSSSAG00000001947)	pla2g6 (ENSSSAG00000002042)
Oncorhynchus	ANCESTRAL SPECIES	78	ENSGT00390000012872.b.e.a	ENSGT00390000005639.a.b.d.b	ENSGT00390000002554	ENSGT00940000157798.b.e	ENSGT00970000194718.b.b.a.b.b	ENSGT01010000222294.c.b.b.b.c.a.a.a.b	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a.b	ENSGT00940000162611.b	ENSGT00940000162611.a.a.a.a	ENSGT00730000111173.h #7	ENSGT00530000063604.A.d.a	ENSGT00940000157525.a.d #20	ENSGT00950000183082.b.b.a.b.d.a.a ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d.c #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a.d	ENSGT00940000162476.d.a.a	ENSGT00940000161036.B.b.b.b.b	ENSGT00940000178559	ENSGT00530000063801.a.a	ENSGT01030000234599.a.b.d.b.b.a.a	ENSGT00390000016774.f	ENSGT00510000046773.a.b.c.b.c.b	ENSGT00510000049239.a.d.b	ENSGT00510000049239.a.d.a	ENSGT00940000160104.u.b	ENSGT00940000167614.e.a	ENSGT00390000008221.a
Oncorhynchus_a	ANCESTRAL SPECIES	199								ENSGT01010000222294.c.b.b.b.c.a.a.a.b	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a.b	ENSGT00730000111173.h #7	ENSGT00530000063604.A.d.a	ENSGT00940000157525.a.d #20	ENSGT00950000183082.b.b.a.b.d.a.a ##21	ENSGT00940000157556.a.a #22	ENSGT00940000157049.d.c #23	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a.d
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	30	ENSOKIG00005038025	ENSOKIG00005038091	ENSOKIG00005038140	ENSOKIG00005038212	ENSOKIG00005038221	ENSOKIG00005038256	ARHGAP19 (ENSOKIG00005038309)	slit1b (ENSOKIG00005038800)	ENSOKIG00005046873	ENSOKIG00005046877	ENSOKIG00005046882 #7	ENSOKIG00005046887	hoga1 (ENSOKIG00005046891)	CNNM1 (ENSOKIG00005046908) #20	GOT1 (ENSOKIG00005046930) ##21	NKX2-3 (ENSOKIG00005046944) #22	SLC25A28 (ENSOKIG00005046952) #23	ENTPD7 (ENSOKIG00005046983) #24	ENSOKIG00005047341	ENSOKIG00005047349	atpv0e2 (ENSOKIG00005047354)	CACNA1I (ENSOKIG00005047375)	ADAP1 (ENSOKIG00005047571)	ENSOKIG00005047817	ENSOKIG00005047820	lgals2b (ENSOKIG00005047829)	GTPBP1 (ENSOKIG00005047855)	ELFN2 (ENSOKIG00005047897)	ENSOKIG00005047910	sult3st4 (ENSOKIG00005047919)	ENSOKIG00005047946
Coho salmon	MODERN SPECIES	964																NKX2-3 (ENSOKIG00005041945) #22	SLC25A28 (ENSOKIG00005041959) #23
Chinook salmon	MODERN SPECIES	25	golga7ba (ENSOTSG00005044944) #13	crtac1a (ENSOTSG00005044946) #14	ENSOTSG00005044954	ENSOTSG00005044955	vasna (ENSOTSG00005044956)	baiap2l2b (ENSOTSG00005044957)	pla2g6 (ENSOTSG00005044959)	cbx6a (ENSOTSG00005044971)	nptxrb (ENSOTSG00005044972)	ENSOTSG00005044973	ENSOTSG00005044975	ENSOTSG00005044977	GOT1 (ENSOTSG00005044978) ##21	CNNM1 (ENSOTSG00005044980) #20	hoga1 (ENSOTSG00005044985)	NKX2-3 (ENSOTSG00005044988) #22	slc25a28 (ENSOTSG00005044989) #23	ENSOTSG00005044991 #24	ENSOTSG00005044992	ENSOTSG00005044993	ENSOTSG00005045011	ap1m2 (ENSOTSG00005046503)	CDKN2D (ENSOTSG00005036322)	ENSOTSG00005036339	keap1b (ENSOTSG00005036359)	KCNJ4 (ENSOTSG00005036361)	SOX10 (ENSOTSG00005036362)	si:dkey-43k4.3 (ENSOTSG00005036363)	ENSOTSG00005036364	gga1 (ENSOTSG00005036367)	ENSOTSG00005037691
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	8	ENSOMYG00000060200	ENSOMYG00000051447	ENSOMYG00000061892	ENSOMYG00000055249	ENSOMYG00000009538	ENSOMYG00000068527	ENSOMYG00000009498	ENSOMYG00000007516	slit1b (ENSOMYG00000056877)	ENSOMYG00000062698	ENSOMYG00000057804	ENSOMYG00000071228 #7	hoga1 (ENSOMYG00000076754)	CNNM1 (ENSOMYG00000059734) #20	GOT1 (ENSOMYG00000062775) ##21	NKX2-3 (ENSOMYG00000036947) #22	SLC25A28 (ENSOMYG00000004834) #23	ENTPD7 (ENSOMYG00000004886) #24	ENSOMYG00000075318	ENSOMYG00000065313	ENSOMYG00000056337	ENSOMYG00000064677	ENSOMYG00000055470	ENSOMYG00000052865	ENSOMYG00000069090	ENSOMYG00000050440	ENSOMYG00000005276	ENSOMYG00000071710	ENSOMYG00000050939	ncf4 (ENSOMYG00000069276)	ENSOMYG00000066839
Rainbow trout	MODERN SPECIES	4	ENSOMYG00000058375	ENSOMYG00000072319	ENSOMYG00000032612	ENSOMYG00000050183	ENSOMYG00000064780	ENSOMYG00000061918	ENSOMYG00000049087	ENSOMYG00000076614	slit1b (ENSOMYG00000006609)	ENSOMYG00000006387	ENSOMYG00000006456	ENSOMYG00000049220	hoga1 (ENSOMYG00000006249)	CNNM1 (ENSOMYG00000006207) #20	GOT1 (ENSOMYG00000077120) ##21	NKX2-3 (ENSOMYG00000004459) #22	SLC25A28 (ENSOMYG00000004708) #23	ENSOMYG00000053079	ENTPD7 (ENSOMYG00000004811) #24	ENSOMYG00000066880	ENSOMYG00000004973	ENSOMYG00000005358	ENSOMYG00000069678	ENSOMYG00000050715	ENSOMYG00000069513	ENSOMYG00000005207	ENSOMYG00000072675	ENSOMYG00000061457	ENSOMYG00000076182	ENSOMYG00000074609	ENSOMYG00000068641
Huchen	DUPLICATION
Huchen	MODERN SPECIES	7779																NKX2-3 (ENSHHUG00000019523) #22	slc25a28 (ENSHHUG00000019531) #23
Huchen	MODERN SPECIES	1847																NKX2-3 (ENSHHUG00000003579) #22	slc25a28 (ENSHHUG00000003572) #23	ENTPD7 (ENSHHUG00000003539) #24	ENSHHUG00000003534	ATP6V0E2 (ENSHHUG00000003516)	ENSHHUG00000003510	ENSHHUG00000003496	ENSHHUG00000003466	ENSHHUG00000003457	ENSHHUG00000003452
Northern pike	MODERN SPECIES	8	ENSELUG00000001555	vasna (ENSELUG00000022191)	dnaja3b (ENSELUG00000022179)	pdgfaa (ENSELUG00000022158)	c3b.2 (ENSELUG00000022085)	yju2b (ENSELUG00000021972)	ENSELUG00000021948	wdr83 (ENSELUG00000021938)	wdr83os (ENSELUG00000021892)	cacna1ab (ENSELUG00000021861)	ier2b (ENSELUG00000021759)	stx10 (ENSELUG00000021732)	NACC1 (ENSELUG00000021684)	TRMT1 (ENSELUG00000021659)	man2b1 (ENSELUG00000021635)	NKX2-3 (ENSELUG00000021612) #22	slc25a28 (ENSELUG00000021605) #23	ENTPD7 (ENSELUG00000021567) #24	ENSELUG00000000939	atpv0e2 (ENSELUG00000021480)	ENSELUG00000021447	ENSELUG00000021419	ncf4 (ENSELUG00000021383)	pvalb7 (ENSELUG00000021356)	baiap2l2b (ENSELUG00000021331)	pla2g6 (ENSELUG00000021286)	cbx6a (ENSELUG00000028388)	nptxrb (ENSELUG00000020955)	dnal4 (ENSELUG00000020890)	ENSELUG00000000913	ENSELUG00000024825
Otomorpha	ANCESTRAL SPECIES	55	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000162611.b	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.a #22	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000177979	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.e #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00510000049375 #10
Clupeiformes	ANCESTRAL SPECIES	146										ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.a #22	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000177979	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.e #13	ENSGT00940000160608 #12	ENSGT00940000165757.c.b.b	ENSGT00510000049375 #10
Denticle herring	MODERN SPECIES	13	cant1b (ENSDCDG00000000981)	ENSDCDG00000001004	si:dkey-93h22.8 (ENSDCDG00000001043)	ldb1b (ENSDCDG00000001084)	armh3 (ENSDCDG00000001301)	KCNIP2 (ENSDCDG00000001316)	ARHGAP19 (ENSDCDG00000001323)	slit1b (ENSDCDG00000001399)	ENSDCDG00000002106	ENSDCDG00000002115	MORN4 (ENSDCDG00000002121) #7	hoga1 (ENSDCDG00000002126)	ENSDCDG00000002133	ENSDCDG00000002139 #20	GOT1 (ENSDCDG00000002146) ##21	ENSDCDG00000002154 #22	ENTPD7 (ENSDCDG00000002163) #24	ENSDCDG00000002170	atpv0e2 (ENSDCDG00000002173)	ENSDCDG00000002188	ENSDCDG00000002287	nptxrb (ENSDCDG00000002289)	ENSDCDG00000002295	ubn2a (ENSDCDG00000002299)	ttc26 (ENSDCDG00000002306)	rpsa (ENSDCDG00000002337)	slc25a38b (ENSDCDG00000002345)	IFT27 (ENSDCDG00000002346)	ncf4 (ENSDCDG00000002348)	baiap2l2b (ENSDCDG00000002350)	pla2g6 (ENSDCDG00000002351)
Osteoglossocephalai	ANCESTRAL SPECIES	213										ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT00940000164861	ENSGT00940000161036.B	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a #13	ENSGT00940000160608 #12	ENSGT00390000013298 #11	ENSGT00940000165757	ENSGT00510000049375 #10	ENSGT00970000193827	ENSGT00730000112219	ENSGT00510000049872 #9	ENSGT00390000010434.b #8
Clupeocephala	ANCESTRAL SPECIES	91							ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000177979	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00510000049375 #10	ENSGT00970000193827	ENSGT00390000000464	ENSGT00940000155032.k	ENSGT00940000158630.g.b	ENSGT00390000013106
Otomorpha	ANCESTRAL SPECIES	55	ENSGT00940000162611.a.a.b	ENSGT00940000162611.b	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.a #22	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000177979	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.e #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.a.b	ENSGT00390000000464	ENSGT00940000155032.k	ENSGT00940000158630.g.b	ENSGT00390000013106
Otophysi	ANCESTRAL SPECIES	26	ENSGT00940000154445.a	ENSGT00940000155309.o	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000162535	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.e #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.a.b	ENSGT00390000000464	ENSGT00940000155032.k	ENSGT00390000013106	ENSGT00940000157727.x.b
Characiphysae	ANCESTRAL SPECIES	13	ENSGT00940000156883	ENSGT00940000154445.a	ENSGT00940000155309.o	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000162535	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.e #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.a.b	ENSGT00390000000464	ENSGT00940000155032.k	ENSGT00390000013106	ENSGT00940000157727.x.b
Channel catfish	MODERN SPECIES	22	ENSIPUG00000002379	ENSIPUG00000002368	ckba (ENSIPUG00000002321)	ENSIPUG00000002311	pcdh15a (ENSIPUG00000001088)	dkk1a (ENSIPUG00000001048)	PRKG1 (ENSIPUG00000000923)	nkx1.2la (ENSIPUG00000000917)	morn4 (ENSIPUG00000000904)	ENSIPUG00000000831	st3gal7 (ENSIPUG00000000817)	hps1 (ENSIPUG00000000808) #18	hpse2 (ENSIPUG00000000802) #19	cnnm1 (ENSIPUG00000000793) #20	got1 (ENSIPUG00000000781) ##21	Nkx2-3 (ENSIPUG00000000774) #22	nkx3.3 (ENSIPUG00000000771)	slc25a28 (ENSIPUG00000000758) #23	pyroxd2 (ENSIPUG00000000727)	ENSIPUG00000000715	LOXL4 (ENSIPUG00000000704) #16	crtac1 (ENSIPUG00000000369) #14	GOLGA7B (ENSIPUG00000000366) #13	sfrp5 (ENSIPUG00000000363) #12	zgc:171482 (ENSIPUG00000000361)	ENSIPUG00000000356	marveld1 (ENSIPUG00000000351) #10	pgam1a (ENSIPUG00000000343)	mettl18 (ENSIPUG00000000340)	ZDHHC16 (ENSIPUG00000000333)	RRP12 (ENSIPUG00000000311)
Characiphysae_b	ANCESTRAL SPECIES	10	ENSGT00940000156883	ENSGT00940000154445.a	ENSGT00940000155309.o	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000162535	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.e #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.a.b	ENSGT00390000000464	ENSGT00940000155032.k	ENSGT00390000013106	ENSGT00940000157727.x.b
Electric eel	MODERN SPECIES	1	atl2 (ENSEEEG00000003481)	galm (ENSEEEG00000003433)	DHX57 (ENSEEEG00000003403)	cisd1 (ENSEEEG00000003401)	ENSEEEG00000003400	pcdh15a (ENSEEEG00000003396)	dkk1a (ENSEEEG00000003389)	prkg1a (ENSEEEG00000003379)	nkx1.2la (ENSEEEG00000003375)	morn4 (ENSEEEG00000003374) #7	st3gal7 (ENSEEEG00000003373)	hps1 (ENSEEEG00000003372) #18	HPSE2 (ENSEEEG00000003368) #19	CNNM1 (ENSEEEG00000003359) #20	got1 (ENSEEEG00000003358) ##21	nkx2.3 (ENSEEEG00000003356) #22	nkx3.3 (ENSEEEG00000003355)	slc25a28 (ENSEEEG00000003354) #23	pyroxd2 (ENSEEEG00000003301)	ENSEEEG00000003295	LOXL4 (ENSEEEG00000003102) #16	CRTAC1 (ENSEEEG00000003086) #14	GOLGA7B (ENSEEEG00000003050) #13	sfrp5 (ENSEEEG00000003044) #12	zgc:171482 (ENSEEEG00000003042)	ENSEEEG00000003040	marveld1 (ENSEEEG00000003037) #10	ENSEEEG00000003014	ENSEEEG00000003008	mettl18 (ENSEEEG00000003005)	zdhhc16a (ENSEEEG00000003000)
Characoidei	ANCESTRAL SPECIES	5	ENSGT00940000156883	ENSGT00940000154445.a	ENSGT00940000155309.o	ENSGT00940000156675.c	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000162535	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.e #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.a.b	ENSGT00390000000464	ENSGT00940000155032.k	ENSGT00390000013106	ENSGT00940000157727.x.b
Red-bellied piranha	MODERN SPECIES	10	galm (ENSPNAG00000030001)	DHX57 (ENSPNAG00000030009)	cisd1 (ENSPNAG00000030012)	ENSPNAG00000030016	pcdh15a (ENSPNAG00000030069)	dkk1a (ENSPNAG00000030084)	prkg1a (ENSPNAG00000030089)	nkx1.2la (ENSPNAG00000030090)	morn4 (ENSPNAG00000030091) #7	ENSPNAG00000030093	st3gal7 (ENSPNAG00000030096)	hps1 (ENSPNAG00000030102) #18	HPSE2 (ENSPNAG00000030103) #19	CNNM1 (ENSPNAG00000030104) #20	got1 (ENSPNAG00000000299) ##21	nkx2.3 (ENSPNAG00000005006) #22	nkx3.3 (ENSPNAG00000005540)	slc25a28 (ENSPNAG00000000304) #23	pyroxd2 (ENSPNAG00000000311)	zgc:123010 (ENSPNAG00000007579)	LOXL4 (ENSPNAG00000000318) #16	CRTAC1 (ENSPNAG00000000329) #14	GOLGA7B (ENSPNAG00000007606) #13	ENSPNAG00000000338	ENSPNAG00000000340	sfrp5 (ENSPNAG00000000343) #12	zgc:171482 (ENSPNAG00000007619)	marveld1 (ENSPNAG00000000351) #10	pgam1a (ENSPNAG00000007625)	mettl18 (ENSPNAG00000000356)	zdhhc16a (ENSPNAG00000000371)
Mexicana tetra	MODERN SPECIES	17	ENSAMXG00000037132	ENSAMXG00000043287	pcdh15a (ENSAMXG00000002174)	dkk1a (ENSAMXG00000036955)	prkg1a (ENSAMXG00000002208)	ENSAMXG00000031664	nkx1.2la (ENSAMXG00000034353)	morn4 (ENSAMXG00000029923) #7	ANKRD2 (ENSAMXG00000002218)	st3gal7 (ENSAMXG00000037674)	hps1 (ENSAMXG00000002227) #18	ENSAMXG00000030747	HPSE2 (ENSAMXG00000002240) #19	CNNM1 (ENSAMXG00000002241) #20	got1 (ENSAMXG00000002245) ##21	nkx2.3 (ENSAMXG00000032911) #22	nkx3.3 (ENSAMXG00000032822)	slc25a28 (ENSAMXG00000035752) #23	pyroxd2 (ENSAMXG00000002255)	zgc:123010 (ENSAMXG00000041967)	LOXL4 (ENSAMXG00000002265) #16	CRTAC1 (ENSAMXG00000042122) #14	GOLGA7B (ENSAMXG00000034309) #13	sfrp5 (ENSAMXG00000035696) #12	zgc:171482 (ENSAMXG00000002299)	marveld1 (ENSAMXG00000002301) #10	mettl18 (ENSAMXG00000041233)	pgam1a (ENSAMXG00000032198)	zdhhc16a (ENSAMXG00000002308)	ubtd1a (ENSAMXG00000043652)	rrp12 (ENSAMXG00000012852)
Cyprinoidei	ANCESTRAL SPECIES	38	ENSGT00940000154445.a	ENSGT00940000155309.o	ENSGT00940000156675.c	ENSGT00440000038232	ENSGT00940000165723.b	ENSGT00940000154704.d.b	ENSGT00390000004632	ENSGT00940000162535	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.e #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00510000049375.c #10	ENSGT00390000008727.a.a.d.j	ENSGT00940000166602.B	ENSGT00390000003939.d	ENSGT00390000003939.c	ENSGT00940000162787.c
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	166	ENSGT00940000157736.r	ENSGT00950000182992.a.b.a.a.d	ENSGT00950000183037.B.a.m	ENSGT00390000003094.eb	ENSGT00940000154445.a.a	ENSGT00940000155309.o.a	ENSGT00940000156675.c.d	ENSGT00940000165723.b.c	ENSGT00940000154704.d.b.d.a.b	ENSGT00940000162535.a	ENSGT00730000111173.g.a.b #7	ENSGT00390000015298.h #18	ENSGT00390000004874.a.a.sb #19	ENSGT00940000157525.b.b #20	ENSGT00950000183082.b.b.a.a.e ##21	ENSGT00940000157556.a.b.a #22	ENSGT00940000165452.a.e.a	ENSGT00940000157049.e.a #23	ENSGT00940000164861.b	ENSGT00940000161036.B.a.a	ENSGT00940000157042.c.a.b #16	ENSGT00390000013726.c.a #14	ENSGT00390000000134.a.e.b #13	ENSGT00940000160608.h #12	ENSGT00940000165757.d.s.b	ENSGT00510000049375.c.a.b #10	ENSGT00390000008727.a.a.d.j.b	ENSGT00390000003939.c	ENSGT00940000162787.c.a	ENSGT00940000157565.n
Cyprininae_a	ANCESTRAL SPECIES	29	ENSGT00950000182992.a.b.a.a.d	ENSGT00950000183037.B.a.m	ENSGT00390000003094.eb	ENSGT01030000236031	ENSGT00940000154445.a.a	ENSGT00940000155309.o.a	ENSGT00940000156675.c.d	ENSGT00940000165723.b.c	ENSGT00940000154704.d.b.d.a.b	ENSGT00940000162535.a	ENSGT00730000111173.g.a.b #7	ENSGT00390000015298.h #18	ENSGT00390000004874.a.a.sb #19	ENSGT00940000157525.b.b #20	ENSGT00950000183082.b.b.a.a.e ##21	ENSGT00940000157556.a.b.a #22	ENSGT00940000165452.a.e.a	ENSGT00940000157049.e.a #23	ENSGT00940000164861.b	ENSGT00940000161036.B.a.a	ENSGT00940000157042.c.a.b #16	ENSGT00390000013726.c.a #14	ENSGT00390000000134.a.e.b #13	ENSGT00940000160608.h #12	ENSGT00940000165757.d.s.b	ENSGT00510000049375.c.a.b #10	ENSGT00390000008727.a.a.d.j.b	ENSGT00390000003939.c	ENSGT00940000162787.c.a	ENSGT00940000157565.n	ENSGT00390000002581.a
Common carp reference	MODERN SPECIES	18	nanp (ENSCCRG00000044983)	cisd1 (ENSCCRG00000064079)	ENSCCRG00000044967	ENSCCRG00000057618	pcdh15a (ENSCCRG00000021498)	dkk1a (ENSCCRG00000013419)	prkg1a (ENSCCRG00000013414)	prkg1a (ENSCCRG00000029561)	nkx1.2la (ENSCCRG00000056769)	morn4 (ENSCCRG00000001790) #7	ENSCCRG00000075057	hps1 (ENSCCRG00000072134) #18	HPSE2 (ENSCCRG00000001819) #19	ENSCCRG00000067066	CNNM1 (ENSCCRG00000080110) #20	nkx2.3 (ENSCCRG00000035995) #22	got1 (ENSCCRG00000036001) ##21	nkx3.3 (ENSCCRG00000035993)	slc25a28 (ENSCCRG00000068571) #23	pyroxd2 (ENSCCRG00000051963)	zgc:123010 (ENSCCRG00000076868)	LOXL4 (ENSCCRG00000002090) #16	CRTAC1 (ENSCCRG00000081317) #14	GOLGA7B (ENSCCRG00000057182) #13	sfrp5 (ENSCCRG00000061041) #12	zgc:171482 (ENSCCRG00000077809)	ENSCCRG00000064721 #10	ENSCCRG00000067128	ENSCCRG00000032856	zgc:172136 (ENSCCRG00000032840)	fam135a (ENSCCRG00000032867)
Golden-line barbel	MODERN SPECIES	76	ENSSGRG00000039723	cisd1 (ENSSGRG00000039719)	ENSSGRG00000039716	ENSSGRG00000039711	pcdh15a (ENSSGRG00000039622)	dkk1a (ENSSGRG00000039601)	prkg1a (ENSSGRG00000039565)	nkx1.2la (ENSSGRG00000039560)	ENSSGRG00000039556	ANKRD2 (ENSSGRG00000039555)	st3gal7 (ENSSGRG00000039553)	hps1 (ENSSGRG00000039548) #18	HPSE2 (ENSSGRG00000039537) #19	ENSSGRG00000039534 #20	got1 (ENSSGRG00000039513) ##21	nkx2.3 (ENSSGRG00000039508) #22	nkx3.3 (ENSSGRG00000039506)	slc25a28 (ENSSGRG00000039505) #23	pyroxd2 (ENSSGRG00000039502)	zgc:123010 (ENSSGRG00000039496)	LOXL4 (ENSSGRG00000039488) #16	CRTAC1 (ENSSGRG00000039483) #14	gar1 (ENSSGRG00000039477)	eif4ea (ENSSGRG00000039472)	adh5 (ENSSGRG00000039460)	adra1bb (ENSSGRG00000039456)	ENSSGRG00000039455	pcdh10b (ENSSGRG00000039441)
Goldfish	MODERN SPECIES	4	ENSCARG00000018615	ly6pge (ENSCARG00000018652)	ppm1aa (ENSCARG00000018657)	dhrs7 (ENSCARG00000018673)	ENSCARG00000018683	hif1aa (ENSCARG00000018698)	SERTAD4 (ENSCARG00000018781)	SYT14 (ENSCARG00000018786)	utp25 (ENSCARG00000018801)	prkg1a (ENSCARG00000018840)	nkx1.2la (ENSCARG00000018921)	dkk1a (ENSCARG00000018928)	ENSCARG00000018939 #19	CNNM1 (ENSCARG00000018945) #20	got1 (ENSCARG00000018955) ##21	nkx2.3 (ENSCARG00000019008) #22	nkx3.3 (ENSCARG00000019016)	slc25a28 (ENSCARG00000019023) #23	pyroxd2 (ENSCARG00000019047)	zgc:123010 (ENSCARG00000019115)	LOXL4 (ENSCARG00000019129) #16	ENSCARG00000019133	MDGA1 (ENSCARG00000019162)	zfyve21 (ENSCARG00000019523)	fhip2a (ENSCARG00000019575)	ENSCARG00000020216	ablim1a (ENSCARG00000020260)	dact2 (ENSCARG00000020795)	SMOC2 (ENSCARG00000020807)	eif3s6ip (ENSCARG00000020859)	cdh23 (ENSCARG00000021413)
Cyprininae	ANCESTRAL SPECIES	4	ENSGT00940000154445.a.b	ENSGT00940000155309.o.b	ENSGT00940000156675.c.c	ENSGT00940000165723.b.d	ENSGT00940000154704.d.b.c	ENSGT00390000004632	ENSGT00940000154704.d.b.d.a.a	ENSGT00940000162535.b	ENSGT00730000111173.g.a.a #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298.g #18	ENSGT00390000004874.a.a.rb.a #19	ENSGT00940000157525.b.a #20	ENSGT00950000183082.b.b.a.a.f ##21	ENSGT00940000157556.a.b.b #22	ENSGT00940000165452.a.e.b	ENSGT00940000157049.f #23	ENSGT00940000164861.a	ENSGT00940000161036.B.a.b	ENSGT00940000157042.c.a.a #16	ENSGT00390000013726.c.b #14	ENSGT00390000000134.a.e.a #13	ENSGT00940000160608.g #12	ENSGT00940000165757.d.s.a	ENSGT00510000049375.c.b #10	ENSGT00510000049375.c.a.a #10	ENSGT00390000008727.a.a.d.j.a	ENSGT00940000166602.B	ENSGT00940000162787.c.b	ENSGT00940000157565.m
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	343	nanp (ENSCARG00000048443)	polr1b (ENSCARG00000048483)	cisd1 (ENSCARG00000048752)	ENSCARG00000048787	pcdh15a (ENSCARG00000048883)	dkk1a (ENSCARG00000049720)	prkg1a (ENSCARG00000049740)	nkx1.2la (ENSCARG00000049782)	morn4 (ENSCARG00000049795) #7	ANKRD2 (ENSCARG00000049819)	st3gal7 (ENSCARG00000049890)	hps1 (ENSCARG00000049925) #18	HPSE2 (ENSCARG00000050182) #19	CNNM1 (ENSCARG00000050265) #20	got1 (ENSCARG00000050305) ##21	nkx2.3 (ENSCARG00000050323) #22	nkx3.3 (ENSCARG00000050342)	slc25a28 (ENSCARG00000050350) #23	pyroxd2 (ENSCARG00000050386)	zgc:123010 (ENSCARG00000051020)	LOXL4 (ENSCARG00000051164) #16	CRTAC1 (ENSCARG00000051270) #14	GOLGA7B (ENSCARG00000052355) #13	sfrp5 (ENSCARG00000052367) #12	zgc:171482 (ENSCARG00000052388)	marveld1 (ENSCARG00000052412) #10	SLC35F3 (ENSCARG00000052425)	ENSCARG00000052450	zgc:172136 (ENSCARG00000052471)	fam135a (ENSCARG00000052542)	col9a1b (ENSCARG00000053056)
Goldfish	MODERN SPECIES	31	GDF10 (ENSCARG00000069266)	ENSCARG00000069261	ENSCARG00000069249	mapk8a (ENSCARG00000068974)	ARHGAP22 (ENSCARG00000068922)	ENSCARG00000068915	ENSCARG00000068894	LRRC18 (ENSCARG00000068886)	vstm4a (ENSCARG00000068878)	ENSCARG00000068877	drgx (ENSCARG00000068874)	cxcl12a (ENSCARG00000068871)	HPSE2 (ENSCARG00000068866) #19	CNNM1 (ENSCARG00000068864) #20	got1 (ENSCARG00000068854) ##21	nkx2.3 (ENSCARG00000068846) #22	nkx3.3 (ENSCARG00000068839)	slc25a28 (ENSCARG00000068831) #23	pyroxd2 (ENSCARG00000068734)	zgc:123010 (ENSCARG00000068708)	LOXL4 (ENSCARG00000068696) #16	ENSCARG00000068689	CRTAC1 (ENSCARG00000068383) #14	GOLGA7B (ENSCARG00000068356) #13	sfrp5 (ENSCARG00000068349) #12	asrgl1 (ENSCARG00000068335)	OGFRL1 (ENSCARG00000068324)	b3gat2 (ENSCARG00000068307)	smap1 (ENSCARG00000068232)	SDHAF4 (ENSCARG00000068213)	tlx1 (ENSCARG00000068195)
Cyprininae_a	ANCESTRAL SPECIES	202	ENSGT00940000154445.a.b	ENSGT00940000155309.o.b	ENSGT00940000156675.c.c	ENSGT00940000165723.b.d	ENSGT00940000154704.d.b.c	ENSGT00390000004632	ENSGT00940000154704.d.b.d.a.a	ENSGT00940000162535.b	ENSGT00730000111173.g.a.a #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298.g #18	ENSGT00390000004874.a.a.rb.a #19	ENSGT00940000157525.b.a #20	ENSGT00950000183082.b.b.a.a.f ##21	ENSGT00940000157556.a.b.b #22	ENSGT00940000165452.a.e.b	ENSGT00940000157049.f #23	ENSGT00940000164861.a	ENSGT00940000161036.B.a.b	ENSGT00940000157042.c.a.a #16	ENSGT00390000013726.c.b #14	ENSGT00390000000134.a.e.a #13	ENSGT00940000160608.g #12	ENSGT00940000165757.d.s.a	ENSGT00510000049375.c.b #10	ENSGT00510000049375.c.a.a #10	ENSGT00390000008727.a.a.d.j.a	ENSGT00940000166602.B	ENSGT00940000162787.c.b	ENSGT00940000157565.m
Common carp reference	MODERN SPECIES	48	polr1b (ENSCCRG00000045007)	cisd1 (ENSCCRG00000066341)	ENSCCRG00000058992	pcdh15a (ENSCCRG00000068216)	dkk1a (ENSCCRG00000031556)	prkg1a (ENSCCRG00000068391)	ENSCCRG00000077794	nkx1.2la (ENSCCRG00000039674)	morn4 (ENSCCRG00000074100) #7	ENSCCRG00000030260	st3gal7 (ENSCCRG00000030262)	hps1 (ENSCCRG00000031229) #18	HPSE2 (ENSCCRG00000020309) #19	CNNM1 (ENSCCRG00000051557) #20	got1 (ENSCCRG00000016069) ##21	nkx2.3 (ENSCCRG00000051959) #22	nkx3.3 (ENSCCRG00000048165)	slc25a28 (ENSCCRG00000024950) #23	pyroxd2 (ENSCCRG00000024966)	zgc:123010 (ENSCCRG00000051966)	ENSCCRG00000042003 #16	GOLGA7B (ENSCCRG00000023763) #13	CRTAC1 (ENSCCRG00000038325) #14	sfrp5 (ENSCCRG00000059427) #12	zgc:171482 (ENSCCRG00000054354)	marveld1 (ENSCCRG00000061224) #10	ENSCCRG00000082523	ENSCCRG00000002885	zgc:172136 (ENSCCRG00000024428)	fam135a (ENSCCRG00000032891)	col9a1b (ENSCCRG00000032965)
Golden-line barbel	MODERN SPECIES	296					pcdh15a (ENSSGRG00000025496)	dkk1a (ENSSGRG00000025751)	ENSSGRG00000025754	ENSSGRG00000025757	nkx1.2la (ENSSGRG00000025758)	morn4 (ENSSGRG00000025759) #7	st3gal7 (ENSSGRG00000025760)	hps1 (ENSSGRG00000025761) #18	HPSE2 (ENSSGRG00000025762) #19	CNNM1 (ENSSGRG00000025771) #20	got1 (ENSSGRG00000025773) ##21	nkx2.3 (ENSSGRG00000025775) #22	slc25a28 (ENSSGRG00000025777) #23	pyroxd2 (ENSSGRG00000025778)	zgc:123010 (ENSSGRG00000025836)	LOXL4 (ENSSGRG00000025837) #16	CRTAC1 (ENSSGRG00000025970) #14	GOLGA7B (ENSSGRG00000025971) #13	sfrp5 (ENSSGRG00000025975) #12	ENSSGRG00000025978	marveld1 (ENSSGRG00000025981) #10	SLC35F3 (ENSSGRG00000025982)	zgc:172136 (ENSSGRG00000025987)	ENSSGRG00000025989	col9a1b (ENSSGRG00000025991)
Zebrafish	MODERN SPECIES	4	cisd1 (ENSDARG00000079516)	ENSDARG00000076699	ENSDARG00000109618	pcdh15a (ENSDARG00000098257)	ENSDARG00000101911	dkk1a (ENSDARG00000014103)	prkg1a (ENSDARG00000020656)	nkx1.2la (ENSDARG00000006350)	morn4 (ENSDARG00000039062) #7	ANKRD2 (ENSDARG00000002722)	st3gal7 (ENSDARG00000039064)	hps1 (ENSDARG00000026170) #18	HPSE2 (ENSDARG00000078163) #19	CNNM1 (ENSDARG00000078087) #20	got1 (ENSDARG00000039093) ##21	nkx2.3 (ENSDARG00000039095) #22	nkx3.3 (ENSDARG00000069327)	slc25a28 (ENSDARG00000052994) #23	pyroxd2 (ENSDARG00000014101)	zgc:123010 (ENSDARG00000039082)	LOXL4 (ENSDARG00000025089) #16	CRTAC1 (ENSDARG00000102517) #14	GOLGA7B (ENSDARG00000105099) #13	sfrp5 (ENSDARG00000039041) #12	zgc:171482 (ENSDARG00000074415)	marveld1 (ENSDARG00000011724) #10	SLC35F3 (ENSDARG00000059850)	ENSDARG00000075970	ENSDARG00000092550	ENSDARG00000079055	FRMD1 (ENSDARG00000078741)
Clupeiformes	ANCESTRAL SPECIES	146					ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.a #22	ENSGT01100000263540.B.c #24	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT00940000177979	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049 #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.e #13	ENSGT00940000160608 #12	ENSGT00940000165757.c.b.b	ENSGT00510000049375 #10	ENSGT00390000010434.b.p #8	ENSGT00950000182926.b.d.a.a.a.a	ENSGT00950000182926.b.d.a.a.a.b	ENSGT00390000000464	ENSGT00940000155032.k
Atlantic herring	MODERN SPECIES	4	ENSCHAG00000002359	ENSCHAG00000002762	ADD3 (ENSCHAG00000002808)	smndc1 (ENSCHAG00000002928)	ENSCHAG00000002982	ENSCHAG00000003010	ENSCHAG00000003045	ENSCHAG00000003211	ENSCHAG00000006713	st3gal7 (ENSCHAG00000006723)	hps1 (ENSCHAG00000006731) #18	HPSE2 (ENSCHAG00000006872) #19	CNNM1 (ENSCHAG00000006990) #20	got1 (ENSCHAG00000006994) ##21	ENSCHAG00000007034	nkx2.3 (ENSCHAG00000007059) #22	got1 (ENSCHAG00000007159) ##21	ENSCHAG00000007211	slc25a28 (ENSCHAG00000007238) #23	pyroxd2 (ENSCHAG00000007272)	zgc:123010 (ENSCHAG00000008078)	LOXL4 (ENSCHAG00000008097) #16	CRTAC1 (ENSCHAG00000008481) #14	GOLGA7B (ENSCHAG00000008889) #13	sfrp5 (ENSCHAG00000009066) #12	zgc:171482 (ENSCHAG00000009081)	marveld1 (ENSCHAG00000009102) #10	PI4K2A (ENSCHAG00000009115) #8	ENSCHAG00000009123	mettl18 (ENSCHAG00000009147)	zdhhc16a (ENSCHAG00000009157)
Euteleosteomorpha	ANCESTRAL SPECIES	68	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000162611.a.b	ENSGT00940000170319	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000177979	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00510000049375 #10	ENSGT00730000112219	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a
Acanthomorphata	ANCESTRAL SPECIES	16	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000162611.a.b	ENSGT00940000170319	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000177979	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000175215.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	6	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000175336.a	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000177979	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Percomorphaceae	ANCESTRAL SPECIES	5	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000175336.a	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000177979	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Tiger tail seahorse	MODERN SPECIES	108	KCNIP2 (ENSHCOG00000019056)	cox15 (ENSHCOG00000019028) #25	cutc (ENSHCOG00000019004) #26	ENSHCOG00000018973	ARHGAP19 (ENSHCOG00000018882)	slit1a (ENSHCOG00000018867)	ENSHCOG00000018769	ENSHCOG00000018739	ENSHCOG00000018725	st3gal7 (ENSHCOG00000000764)	st3gal7 (ENSHCOG00000018649)	hps1 (ENSHCOG00000018534) #18	HPSE2 (ENSHCOG00000018471) #19	CNNM1 (ENSHCOG00000018366) #20	got1 (ENSHCOG00000018316) ##21	nkx2.3 (ENSHCOG00000018280) #22	slc25a28 (ENSHCOG00000018276) #23	pyroxd2 (ENSHCOG00000018248)	zgc:123010 (ENSHCOG00000018210)	ENSHCOG00000018200 #16	ENSHCOG00000018186 #16	CRTAC1 (ENSHCOG00000018161) #14	GOLGA7B (ENSHCOG00000018123) #13	sfrp5 (ENSHCOG00000018105) #12	ENSHCOG00000018091	zgc:171482 (ENSHCOG00000018086)	ENSHCOG00000018066	plek (ENSHCOG00000018052)	prokr1b (ENSHCOG00000018020)	BFSP1 (ENSHCOG00000018001)	pcsk2 (ENSHCOG00000017942)
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000168493	ENSGT00940000175336.a	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000168493	ENSGT00940000175336.a	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000175336.a	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Cyprinodontiformes	ANCESTRAL SPECIES	17	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000175336.a	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Aplocheiloidei	ANCESTRAL SPECIES	43	ENSGT00940000157798.a	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT00940000180462	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Mangrove rivulus	MODERN SPECIES	23	KCNIP2 (ENSKMAG00000020980)	cox15 (ENSKMAG00000021015) #25	cutc (ENSKMAG00000021035) #26	ENSKMAG00000021067	ENSKMAG00000021103	ARHGAP19 (ENSKMAG00000021113)	slit1a (ENSKMAG00000021147)	ENSKMAG00000021239	ENSKMAG00000021243	morn4 (ENSKMAG00000021255) #7	st3gal7 (ENSKMAG00000021261)	hps1 (ENSKMAG00000021266) #18	HPSE2 (ENSKMAG00000021280) #19	CNNM1 (ENSKMAG00000021292) #20	got1 (ENSKMAG00000021303) ##21	nkx2.3 (ENSKMAG00000021312) #22	nkx3.3 (ENSKMAG00000021316)	slc25a28 (ENSKMAG00000021320) #23	pyroxd2 (ENSKMAG00000021330)	zgc:123010 (ENSKMAG00000021350)	ENSKMAG00000021365 #16	CRTAC1 (ENSKMAG00000021378) #14	golga7ba (ENSKMAG00000021404) #13	sfrp5 (ENSKMAG00000021414) #12
Turquoise killifish	MODERN SPECIES	1612	KCNIP2 (ENSNFUG00015004462)	ENSNFUG00015004481	ENSNFUG00015004484	cox15 (ENSNFUG00015004495) #25	cutc (ENSNFUG00015004545) #26	ABCC2 (ENSNFUG00015005526)	LCOR (ENSNFUG00015015325)	ARHGAP19 (ENSNFUG00015015367)	SLIT1A (ENSNFUG00015015720)	morn4 (ENSNFUG00015018340) #7	st3gal7 (ENSNFUG00015018341)	hps1 (ENSNFUG00015018344) #18	HPSE2 (ENSNFUG00015018350) #19	CNNM1 (ENSNFUG00015018360) #20	got1 (ENSNFUG00015018375) ##21	nkx2.3 (ENSNFUG00015018403) #22	nkx3.3 (ENSNFUG00015018405)	SLC25A28 (ENSNFUG00015018407) #23	pyroxd2 (ENSNFUG00015018415)	TTC31 (ENSNFUG00015018453)	LOXL4 (ENSNFUG00015018470) #16	ENSNFUG00015018502	CRTAC1 (ENSNFUG00015018504) #14	GOLGA7BB (ENSNFUG00015018520) #13	SFRP5 (ENSNFUG00015018523) #12	zgc:171482 (ENSNFUG00015018528)	ENSNFUG00015018529	ENSNFUG00015018533	MARVELD1 (ENSNFUG00015018535) #10	PGAM1B (ENSNFUG00015018538)	FAM178A (ENSNFUG00015018546)
Cyprinodontoidei	ANCESTRAL SPECIES	14	ENSGT00940000157798.a	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383.a	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000164383.b	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000170691	ENSGT00940000153997.b.b
Poeciliinae	ANCESTRAL SPECIES	16	ENSGT00940000157798.a	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383.a	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000164383.b	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000170691	ENSGT00940000153997.b.b
Poecilia	ANCESTRAL SPECIES	11	ENSGT00940000157798.a	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383.a	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000164383.b	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000170691	ENSGT00940000153997.b.b
NAME_6	ANCESTRAL SPECIES	25	ENSGT00940000157798.a	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383.a	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000164383.b	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000170691	ENSGT00940000155716
Amazon molly	MODERN SPECIES	555	HPS6 (ENSPFOG00000014237)	KCNIP2 (ENSPFOG00000014204)	cox15 (ENSPFOG00000014173) #25	ENSPFOG00000013938	ENSPFOG00000013897	ARHGAP19 (ENSPFOG00000013841)	slit1a (ENSPFOG00000013298)	ENSPFOG00000013051	ENSPFOG00000013017	morn4 (ENSPFOG00000013001) #7	st3gal7 (ENSPFOG00000012974)	hps1 (ENSPFOG00000012875) #18	HPSE2 (ENSPFOG00000012702) #19	CNNM1 (ENSPFOG00000012597) #20	got1 (ENSPFOG00000012559) ##21	nkx2.3 (ENSPFOG00000012537) #22	nkx3.3 (ENSPFOG00000020885)	slc25a28 (ENSPFOG00000012507) #23	pyroxd2 (ENSPFOG00000012391)
Sailfin molly	MODERN SPECIES	231	cox15 (ENSPLAG00000006546) #25	cutc (ENSPLAG00000006581) #26	ENSPLAG00000006652	ENSPLAG00000006694	ARHGAP19 (ENSPLAG00000006706)	ENSPLAG00000006725	slit1a (ENSPLAG00000006837)	ENSPLAG00000007213	ENSPLAG00000007279	morn4 (ENSPLAG00000007296) #7	st3gal7 (ENSPLAG00000007373)	hps1 (ENSPLAG00000007450) #18	HPSE2 (ENSPLAG00000007551) #19	CNNM1 (ENSPLAG00000007571) #20	got1 (ENSPLAG00000007600) ##21	nkx2.3 (ENSPLAG00000000159) #22	nkx3.3 (ENSPLAG00000007630)	slc25a28 (ENSPLAG00000007647) #23	pyroxd2 (ENSPLAG00000007698)	zgc:123010 (ENSPLAG00000007711)	ENSPLAG00000007732 #16	ENSPLAG00000007770 #16	CRTAC1 (ENSPLAG00000007804) #14
Guppy	MODERN SPECIES	445	cutc (ENSPREG00000020392) #26	ENSPREG00000020351	ENSPREG00000020339	ARHGAP19 (ENSPREG00000020307)	slit1a (ENSPREG00000020253)	ENSPREG00000020066	ENSPREG00000020025	ENSPREG00000020012	ENSPREG00000020007	morn4 (ENSPREG00000019999) #7	st3gal7 (ENSPREG00000019927)	hps1 (ENSPREG00000019883) #18	HPSE2 (ENSPREG00000019796) #19	CNNM1 (ENSPREG00000019717) #20	got1 (ENSPREG00000019685) ##21	nkx2.3 (ENSPREG00000019670) #22	nkx3.3 (ENSPREG00000019662)	slc25a28 (ENSPREG00000019641) #23	pyroxd2 (ENSPREG00000019619)	zgc:123010 (ENSPREG00000019587)	ENSPREG00000019578 #16	ENSPREG00000019565 #16	CRTAC1 (ENSPREG00000019532) #14	golga7ba (ENSPREG00000019525) #13	sfrp5 (ENSPREG00000019287) #12	zgc:171482 (ENSPREG00000019241)	ENSPREG00000019229	marveld1 (ENSPREG00000019221) #10	ENSPREG00000019215	ENSPREG00000019207	ENSPREG00000019193
Platyfish	MODERN SPECIES	14	cox15 (ENSXMAG00000013440) #25	cutc (ENSXMAG00000013437) #26	ENSXMAG00000013392	ENSXMAG00000024016	ARHGAP19 (ENSXMAG00000013379)	slit1a (ENSXMAG00000002408)	ENSXMAG00000002481	ENSXMAG00000002515	ENSXMAG00000021674	morn4 (ENSXMAG00000027912) #7	st3gal7 (ENSXMAG00000002526)	hps1 (ENSXMAG00000002534) #18	HPSE2 (ENSXMAG00000002558) #19	CNNM1 (ENSXMAG00000002566) #20	got1 (ENSXMAG00000022048) ##21	nkx2.3 (ENSXMAG00000027829) #22	nkx3.3 (ENSXMAG00000023050)	slc25a28 (ENSXMAG00000002580) #23	pyroxd2 (ENSXMAG00000002582)	zgc:123010 (ENSXMAG00000002598)	ENSXMAG00000024239 #16	ENSXMAG00000029052 #16	CRTAC1 (ENSXMAG00000002622) #14	golga7ba (ENSXMAG00000002635) #13	sfrp5 (ENSXMAG00000002638) #12	zgc:171482 (ENSXMAG00000002641)	ENSXMAG00000020097	marveld1 (ENSXMAG00000020099) #10	pgam1a (ENSXMAG00000002644)	ENSXMAG00000002647	ENSXMAG00000002655
NAME_4	ANCESTRAL SPECIES	2	ENSGT00940000157798.a	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383.a	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000164383.b	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000170691	ENSGT00940000153997.b.b
Sheepshead minnow	MODERN SPECIES	113													HPSE2 (ENSCVAG00000013108) #19	CNNM1 (ENSCVAG00000013139) #20	got1 (ENSCVAG00000013174) ##21	nkx2.3 (ENSCVAG00000013182) #22	nkx3.3 (ENSCVAG00000000340)	slc25a28 (ENSCVAG00000013208) #23	pyroxd2 (ENSCVAG00000013275)	zgc:123010 (ENSCVAG00000013288)	ENSCVAG00000013303 #16	LOXL4 (ENSCVAG00000013336) #16	CRTAC1 (ENSCVAG00000013370) #14	golga7ba (ENSCVAG00000013553) #13	sfrp5 (ENSCVAG00000013587) #12	zgc:171482 (ENSCVAG00000013606)	ENSCVAG00000013617	marveld1 (ENSCVAG00000013627) #10	pgam1a (ENSCVAG00000013643)	ENSCVAG00000013659	ENSCVAG00000013672
Mummichog	MODERN SPECIES	2448	KCNIP2 (ENSFHEG00000003779)	cox15 (ENSFHEG00000003750) #25	cutc (ENSFHEG00000003722) #26	ENSFHEG00000003665	ENSFHEG00000003139	ARHGAP19 (ENSFHEG00000003120)	slit1a (ENSFHEG00000003102)	ENSFHEG00000002961	ENSFHEG00000000080	morn4 (ENSFHEG00000002479) #7	st3gal7 (ENSFHEG00000002456)	hps1 (ENSFHEG00000002446) #18	HPSE2 (ENSFHEG00000002433) #19	CNNM1 (ENSFHEG00000002420) #20	got1 (ENSFHEG00000002387) ##21	nkx2.3 (ENSFHEG00000002367) #22	nkx3.3 (ENSFHEG00000002355)	slc25a28 (ENSFHEG00000002348) #23	pyroxd2 (ENSFHEG00000002338)	zgc:123010 (ENSFHEG00000002306)	LOXL4 (ENSFHEG00000002295) #16	CRTAC1 (ENSFHEG00000002264) #14	golga7ba (ENSFHEG00000002244) #13	sfrp5 (ENSFHEG00000002237) #12	zgc:171482 (ENSFHEG00000002233)	ENSFHEG00000002220	marveld1 (ENSFHEG00000002216) #10	pgam1a (ENSFHEG00000002210)	ENSFHEG00000002203	ENSFHEG00000002187	zfand4 (ENSFHEG00000002161)
Oryzias	ANCESTRAL SPECIES	6	ENSGT00940000164383.c	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000162611.b	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT01100000265163	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00970000193827	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00940000164383.c	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000162611.b	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT01100000265163	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00970000193827	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Indian medaka	MODERN SPECIES	27	KCNIP2 (ENSOMEG00000002878)	cox15 (ENSOMEG00000002912) #25	cutc (ENSOMEG00000002943) #26	ENSOMEG00000002962	ENSOMEG00000003010	ENSOMEG00000003032	ARHGAP19 (ENSOMEG00000003047)	slit1a (ENSOMEG00000003088)	ENSOMEG00000003116	morn4 (ENSOMEG00000003130) #7	st3gal7 (ENSOMEG00000003156)	hps1 (ENSOMEG00000003177) #18	HPSE2 (ENSOMEG00000003198) #19	CNNM1 (ENSOMEG00000003230) #20	got1 (ENSOMEG00000003293) ##21	nkx2.3 (ENSOMEG00000003316) #22	nkx3.3 (ENSOMEG00000003321)	slc25a28 (ENSOMEG00000003332) #23	pyroxd2 (ENSOMEG00000003379)	zgc:123010 (ENSOMEG00000003408)	LOXL4 (ENSOMEG00000003421) #16	CRTAC1 (ENSOMEG00000003461) #14	golga7ba (ENSOMEG00000003486) #13	sfrp5 (ENSOMEG00000003509) #12	zgc:171482 (ENSOMEG00000003526)	ENSOMEG00000003536	marveld1 (ENSOMEG00000003543) #10	pgam1a (ENSOMEG00000003552)	ENSOMEG00000003591	ENSOMEG00000003742	zfand4 (ENSOMEG00000003785)
Javanese ricefish	MODERN SPECIES	6	ENSOJAG00000016036	ENSOJAG00000014772	ENSOJAG00000014655	ARHGAP19 (ENSOJAG00000014586)	slit1a (ENSOJAG00000014244)	ENSOJAG00000014226	ENSOJAG00000014178	ENSOJAG00000014149	morn4 (ENSOJAG00000014128) #7	st3gal7 (ENSOJAG00000014117)	hps1 (ENSOJAG00000014107) #18	HPSE2 (ENSOJAG00000014022) #19	CNNM1 (ENSOJAG00000013995) #20	ENSOJAG00000013960	got1 (ENSOJAG00000013930) ##21	nkx2.3 (ENSOJAG00000013921) #22	nkx3.3 (ENSOJAG00000013915)	slc25a28 (ENSOJAG00000013902) #23	pyroxd2 (ENSOJAG00000013451)	zgc:123010 (ENSOJAG00000013423)	LOXL4 (ENSOJAG00000013309) #16	CRTAC1 (ENSOJAG00000013109) #14	golga7ba (ENSOJAG00000013072) #13	sfrp5 (ENSOJAG00000013058) #12	zgc:171482 (ENSOJAG00000013050)	ENSOJAG00000013022	marveld1 (ENSOJAG00000013004) #10	pgam1a (ENSOJAG00000012978)	ENSOJAG00000012965	ENSOJAG00000012919	zfand4 (ENSOJAG00000012892)
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00390000008454 #26	ENSGT00940000164383.d	ENSGT00940000164383.c	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT01100000265163	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Chinese medaka	MODERN SPECIES	557					ENSOSIG00000015354	slit1a (ENSOSIG00000007375)	ENSOSIG00000007308	ENSOSIG00000007306	morn4 (ENSOSIG00000007305) #7	st3gal7 (ENSOSIG00000007303)	hps1 (ENSOSIG00000007284) #18	HPSE2 (ENSOSIG00000007281) #19	CNNM1 (ENSOSIG00000007279) #20	ENSOSIG00000007278	got1 (ENSOSIG00000007277) ##21	nkx2.3 (ENSOSIG00000007275) #22	nkx3.3 (ENSOSIG00000007274)	slc25a28 (ENSOSIG00000007272) #23	pyroxd2 (ENSOSIG00000007194)	zgc:123010 (ENSOSIG00000007189)	LOXL4 (ENSOSIG00000006771) #16	CRTAC1 (ENSOSIG00000005087) #14	golga7ba (ENSOSIG00000005065) #13	sfrp5 (ENSOSIG00000005063) #12	zgc:171482 (ENSOSIG00000005061)	ENSOSIG00000005060	ENSOSIG00000005059	marveld1 (ENSOSIG00000005057) #10	pgam1a (ENSOSIG00000005056)	ENSOSIG00000005055	ENSOSIG00000005053
Japanese Medaka HdrR	MODERN SPECIES	6	cox15 (ENSORLG00000008304) #25	cutc (ENSORLG00000008290) #26	ENSORLG00000008249	ENSORLG00000027419	ENSORLG00000030131	ENSORLG00000007936	slit1a (ENSORLG00000007918)	ENSORLG00000030348	morn4 (ENSORLG00000023611) #7	st3gal7 (ENSORLG00000007799)	hps1 (ENSORLG00000007785) #18	HPSE2 (ENSORLG00000028285) #19	CNNM1 (ENSORLG00000007759) #20	ENSORLG00000021808	got1 (ENSORLG00000007741) ##21	nkx2.3 (ENSORLG00000007722) #22	nkx3.3 (ENSORLG00000007716)	slc25a28 (ENSORLG00000007710) #23	pyroxd2 (ENSORLG00000007699)	zgc:123010 (ENSORLG00000007675)	ENSORLG00000007662 #16	ENSORLG00000025258 #16	CRTAC1 (ENSORLG00000007646) #14	GOLGA7B (ENSORLG00000023120) #13	sfrp5 (ENSORLG00000007621) #12	zgc:171482 (ENSORLG00000007607)	ENSORLG00000007598	marveld1 (ENSORLG00000027726) #10	pgam1a (ENSORLG00000007592)	ENSORLG00000026750	ENSORLG00000007565
Ovalentaria_B	ANCESTRAL SPECIES	7	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Cichlidae	ANCESTRAL SPECIES	13	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Pseudocrenilabrinae	ANCESTRAL SPECIES	16	ENSGT00390000008454 #26	ENSGT00940000164383.g	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT00390000008454 #26	ENSGT00940000164383.g	ENSGT00940000179277	ENSGT00940000164383.h	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Haplochromini	ANCESTRAL SPECIES	10	ENSGT00390000008454 #26	ENSGT00940000164383.g	ENSGT00940000179277	ENSGT00940000164383.h.a	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b.i.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Burton s mouthbrooder	MODERN SPECIES	275				ENSHBUG00000002385	ARHGAP19 (ENSHBUG00000002367)	slit1a (ENSHBUG00000000037)	ENSHBUG00000002232	ENSHBUG00000002221	morn4 (ENSHBUG00000002213) #7	ENSHBUG00000002190	st3gal7 (ENSHBUG00000002137)	hps1 (ENSHBUG00000023838) #18	HPSE2 (ENSHBUG00000023726) #19	CNNM1 (ENSHBUG00000023711) #20	got1 (ENSHBUG00000023679) ##21	nkx2.3 (ENSHBUG00000023642) #22	nkx3.3 (ENSHBUG00000023635)	slc25a28 (ENSHBUG00000023629) #23	pyroxd2 (ENSHBUG00000023594)	zgc:123010 (ENSHBUG00000023501)	LOXL4 (ENSHBUG00000023431) #16	CRTAC1 (ENSHBUG00000023382) #14	golga7ba (ENSHBUG00000023337) #13	sfrp5 (ENSHBUG00000023302) #12	zgc:171482 (ENSHBUG00000023289)	ENSHBUG00000000713	marveld1 (ENSHBUG00000023250) #10	pgam1a (ENSHBUG00000023233)	ENSHBUG00000023217	ENSHBUG00000023180	zfand4 (ENSHBUG00000023124)
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00390000008454 #26	ENSGT00940000164383.g	ENSGT00940000179277	ENSGT00940000164383.h.a	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b.i.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00390000008454 #26	ENSGT00940000164383.g	ENSGT00940000179277	ENSGT00940000164383.h.a	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b.i.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Zebra mbuna	MODERN SPECIES	1095	cutc (ENSMZEG00005000833) #26	ENSMZEG00005000717	ENSMZEG00005000570	ENSMZEG00005000431	ARHGAP19 (ENSMZEG00005000419)	slit1a (ENSMZEG00005000186)	ENSMZEG00005000159	ENSMZEG00005027756	morn4 (ENSMZEG00005027754) #7	ENSMZEG00005027751	st3gal7 (ENSMZEG00005027749)	hps1 (ENSMZEG00005027746) #18	HPSE2 (ENSMZEG00005027745) #19	CNNM1 (ENSMZEG00005027743) #20	got1 (ENSMZEG00005027741) ##21	nkx2.3 (ENSMZEG00005027740) #22	nkx3.3 (ENSMZEG00005027739)	slc25a28 (ENSMZEG00005027738) #23	pyroxd2 (ENSMZEG00005027734)	zgc:123010 (ENSMZEG00005027733)	LOXL4 (ENSMZEG00005027731) #16	CRTAC1 (ENSMZEG00005027727) #14	golga7ba (ENSMZEG00005027725) #13	sfrp5 (ENSMZEG00005027723) #12	zgc:171482 (ENSMZEG00005027721)	ENSMZEG00005027720	marveld1 (ENSMZEG00005027719) #10	pgam1a (ENSMZEG00005027718)	ENSMZEG00005027714	ENSMZEG00005027709	zfand4 (ENSMZEG00005027704)
Eastern happy	MODERN SPECIES	4	ENSACLG00000008527	ENSACLG00000008876 #27	ENSACLG00000008892	ENSACLG00000008907	ARHGAP19 (ENSACLG00000009372)	slit1a (ENSACLG00000009382)	ENSACLG00000009523	ENSACLG00000009527	morn4 (ENSACLG00000009540) #7	ENSACLG00000009554	st3gal7 (ENSACLG00000009905)	hps1 (ENSACLG00000009914) #18	HPSE2 (ENSACLG00000009957) #19	CNNM1 (ENSACLG00000010047) #20	got1 (ENSACLG00000010095) ##21	nkx2.3 (ENSACLG00000010118) #22	nkx3.3 (ENSACLG00000010124)	slc25a28 (ENSACLG00000010128) #23	pyroxd2 (ENSACLG00000010143)	zgc:123010 (ENSACLG00000010188)	LOXL4 (ENSACLG00000010205) #16	CRTAC1 (ENSACLG00000010222) #14	golga7ba (ENSACLG00000010439) #13	sfrp5 (ENSACLG00000010486) #12	zgc:171482 (ENSACLG00000010511)	ENSACLG00000010524	ENSACLG00000010535	marveld1 (ENSACLG00000010546) #10	pgam1a (ENSACLG00000010556)	ENSACLG00000010571	ENSACLG00000010645
Nile tilapia	MODERN SPECIES	4	ENSONIG00000030995	ENSONIG00000018323	ARHGAP19 (ENSONIG00000018324)	slit1a (ENSONIG00000018325)	ENSONIG00000039949	ENSONIG00000018331	ENSONIG00000030690	morn4 (ENSONIG00000018332) #7	ENSONIG00000018333	st3gal7 (ENSONIG00000018336)	hps1 (ENSONIG00000018337) #18	HPSE2 (ENSONIG00000018339) #19	CNNM1 (ENSONIG00000018340) #20	ENSONIG00000030907	got1 (ENSONIG00000018342) ##21	nkx2-3 (ENSONIG00000034563) #22	nkx3.3 (ENSONIG00000018347)	slc25a28 (ENSONIG00000034190) #23	pyroxd2 (ENSONIG00000018349)	zgc:123010 (ENSONIG00000018353)	LOXL4 (ENSONIG00000018355) #16	CRTAC1 (ENSONIG00000018358) #14	golga7ba (ENSONIG00000018362) #13	sfrp5 (ENSONIG00000018364) #12	zgc:171482 (ENSONIG00000018365)	ENSONIG00000033910	marveld1 (ENSONIG00000033243) #10	pgam1a (ENSONIG00000018366)	ENSONIG00000018368	zfand4 (ENSONIG00000018374)	marchf8 (ENSONIG00000028453)
Pomacentridae	ANCESTRAL SPECIES	9	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000170319	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Pomacentridae_A	ANCESTRAL SPECIES	7	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Amphiprion	ANCESTRAL SPECIES	13	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Orange clownfish	MODERN SPECIES	12	cutc (ENSAPEG00000015138) #26	ENSAPEG00000014998	ENSAPEG00000014964	ARHGAP19 (ENSAPEG00000014919)	slit1a (ENSAPEG00000014782)	ENSAPEG00000014749	ENSAPEG00000014735	morn4 (ENSAPEG00000014710) #7	ANKRD2 (ENSAPEG00000014682)	st3gal7 (ENSAPEG00000014662)	hps1 (ENSAPEG00000014624) #18	HPSE2 (ENSAPEG00000014449) #19	CNNM1 (ENSAPEG00000014434) #20	ENSAPEG00000014414	got1 (ENSAPEG00000014394) ##21	nkx2.3 (ENSAPEG00000014383) #22	nkx3.3 (ENSAPEG00000014379)	slc25a28 (ENSAPEG00000014360) #23	pyroxd2 (ENSAPEG00000014336)	zgc:123010 (ENSAPEG00000014305)	LOXL4 (ENSAPEG00000014247) #16	CRTAC1 (ENSAPEG00000014202) #14	golga7ba (ENSAPEG00000014181) #13	sfrp5 (ENSAPEG00000014169) #12	zgc:171482 (ENSAPEG00000014154)	ENSAPEG00000014131	marveld1 (ENSAPEG00000014120) #10	pgam1a (ENSAPEG00000014092)	ENSAPEG00000014065	ENSAPEG00000013906	zfand4 (ENSAPEG00000013860)
Clown anemonefish	MODERN SPECIES	1706							ENSAOCG00000005488	ENSAOCG00000005501	morn4 (ENSAOCG00000005518) #7	ANKRD2 (ENSAOCG00000005542)	st3gal7 (ENSAOCG00000005559)	hps1 (ENSAOCG00000005652) #18	HPSE2 (ENSAOCG00000005770) #19	CNNM1 (ENSAOCG00000005791) #20	got1 (ENSAOCG00000005822) ##21	nkx2.3 (ENSAOCG00000005843) #22	nkx3.3 (ENSAOCG00000005851)	slc25a28 (ENSAOCG00000002502) #23	pyroxd2 (ENSAOCG00000005899)	zgc:123010 (ENSAOCG00000005910)	LOXL4 (ENSAOCG00000005959) #16	CRTAC1 (ENSAOCG00000000280) #14	golga7ba (ENSAOCG00000006018) #13	sfrp5 (ENSAOCG00000006022) #12
Spiny chromis	MODERN SPECIES	279	KCNIP2 (ENSAPOG00000020916)	cox15 (ENSAPOG00000020881) #25	cutc (ENSAPOG00000020837) #26	ENSAPOG00000020777	ARHGAP19 (ENSAPOG00000020600)	slit1a (ENSAPOG00000020593)	ENSAPOG00000020357	ENSAPOG00000020337	morn4 (ENSAPOG00000020325) #7	ANKRD2 (ENSAPOG00000020286)	st3gal7 (ENSAPOG00000020131)	hps1 (ENSAPOG00000020112) #18	HPSE2 (ENSAPOG00000020015) #19	CNNM1 (ENSAPOG00000019783) #20	got1 (ENSAPOG00000019764) ##21	nkx2.3 (ENSAPOG00000019713) #22	nkx3.3 (ENSAPOG00000019669)	slc25a28 (ENSAPOG00000019664) #23	pyroxd2 (ENSAPOG00000019643)	zgc:123010 (ENSAPOG00000019633)	LOXL4 (ENSAPOG00000000560) #16	CRTAC1 (ENSAPOG00000019545) #14
Bicolor damselfish	MODERN SPECIES	405						ENSSPAG00000013092	ENSSPAG00000013103	ENSSPAG00000013113	morn4 (ENSSPAG00000013126) #7	ENSSPAG00000013147	st3gal7 (ENSSPAG00000013210)	hps1 (ENSSPAG00000013226) #18	HPSE2 (ENSSPAG00000013299) #19	CNNM1 (ENSSPAG00000013414) #20	got1 (ENSSPAG00000013469) ##21	nkx2.3 (ENSSPAG00000013515) #22	nkx3.3 (ENSSPAG00000013532)	slc25a28 (ENSSPAG00000013538) #23	pyroxd2 (ENSSPAG00000013568)	zgc:123010 (ENSSPAG00000013621)	LOXL4 (ENSSPAG00000013636) #16	CRTAC1 (ENSSPAG00000013676) #14	golga7ba (ENSSPAG00000013700) #13	sfrp5 (ENSSPAG00000013711) #12	zgc:171482 (ENSSPAG00000013724)	ENSSPAG00000013756	marveld1 (ENSSPAG00000013765) #10	pgam1a (ENSSPAG00000013780)	ENSSPAG00000013802	ENSSPAG00000013847	zfand4 (ENSSPAG00000013948)
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000168493	ENSGT00730000111173.g #7	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Fugu	MODERN SPECIES	16	ENSTRUG00000028008	KCNIP2 (ENSTRUG00000025958)	cox15 (ENSTRUG00000024846) #25	cutc (ENSTRUG00000010646) #26	abcc2 (ENSTRUG00000009329)	ENSTRUG00000024980	ARHGAP19 (ENSTRUG00000009178)	slit1a (ENSTRUG00000008791)	ENSTRUG00000008704	ENSTRUG00000032843	ENSTRUG00000030291	hps1 (ENSTRUG00000008073) #18	HPSE2 (ENSTRUG00000007806) #19	cnnm1 (ENSTRUG00000007603) #20	got1 (ENSTRUG00000007276) ##21	nkx2.3 (ENSTRUG00000024381) #22	nkx3.3 (ENSTRUG00000020172)	slc25a28 (ENSTRUG00000007096) #23	pyroxd2 (ENSTRUG00000006805)	LOXL4 (ENSTRUG00000006359) #16	crtac1 (ENSTRUG00000006008) #14	sfrp5 (ENSTRUG00000021491) #12	zgc:171482 (ENSTRUG00000005705)	ENSTRUG00000032921	ENSTRUG00000022628	marveld1 (ENSTRUG00000005698) #10	pgam1a (ENSTRUG00000022599)	ENSTRUG00000005455	ENSTRUG00000004311	zfand4 (ENSTRUG00000004042)	marchf8 (ENSTRUG00000025265)
Tetraodon	MODERN SPECIES	9	ENSTNIG00000016516	ENSTNIG00000001347	KCNIP2 (ENSTNIG00000016515)	cox15 (ENSTNIG00000016514) #25	cutc (ENSTNIG00000016513) #26	ENSTNIG00000016512	ARHGAP19 (ENSTNIG00000016511)	slit1a (ENSTNIG00000005554)	morn4 (ENSTNIG00000002753) #7	st3gal7 (ENSTNIG00000002754)	hps1 (ENSTNIG00000002755) #18	HPSE2 (ENSTNIG00000002756) #19	CNNM1 (ENSTNIG00000002757) #20	got1 (ENSTNIG00000002758) ##21	got1 (ENSTNIG00000005827) ##21	nkx2.3 (ENSTNIG00000005826) #22	slc25a28 (ENSTNIG00000008686) #23	pyroxd2 (ENSTNIG00000008685)	zgc:123010 (ENSTNIG00000001303)	LOXL4 (ENSTNIG00000008684) #16	CRTAC1 (ENSTNIG00000008683) #14	golga7ba (ENSTNIG00000008682) #13	sfrp5 (ENSTNIG00000008681) #12	ENSTNIG00000008680	zgc:171482 (ENSTNIG00000008679)	marveld1 (ENSTNIG00000000905) #10	pgam1a (ENSTNIG00000008678)	ENSTNIG00000008677	ENSTNIG00000008676	zfand4 (ENSTNIG00000008675)	marchf8 (ENSTNIG00000008674)
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000162611.b	ENSGT00940000168493	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
European seabass	MODERN SPECIES	1	ENSDLAG00005009376	ENSDLAG00005009452 #25	ENSDLAG00005009461 #26	ENSDLAG00005009623	ARHGAP19 (ENSDLAG00005010615)	ENSDLAG00005010818	ENSDLAG00005028742	ENSDLAG00005033715	morn4 (ENSDLAG00005033230) #7	ENSDLAG00005013417	st3gal7 (ENSDLAG00005013432)	hps1 (ENSDLAG00005013448) #18	HPSE2 (ENSDLAG00005013466) #19	CNNM1 (ENSDLAG00005013527) #20	got1 (ENSDLAG00005013544) ##21	nkx2.3 (ENSDLAG00005013631) #22	ENSDLAG00005031106	slc25a28 (ENSDLAG00005013638) #23	pyroxd2 (ENSDLAG00005013653)	zgc:123010 (ENSDLAG00005013793)	LOXL4 (ENSDLAG00005013817) #16	CRTAC1 (ENSDLAG00005013859) #14	GOLGA7B (ENSDLAG00005013948) #13	sfrp5 (ENSDLAG00005013957) #12	zgc:171482 (ENSDLAG00005013971)	ENSDLAG00005013980	ENSDLAG00005013994 #10	ENSDLAG00005014016	ENSDLAG00005014064	ZFAND4 (ENSDLAG00005014148)	marchf8 (ENSDLAG00005014173)
Large yellow croaker	MODERN SPECIES	2	cox15 (ENSLCRG00005000306) #25	cutc (ENSLCRG00005000471) #26	ENSLCRG00005000488	ENSLCRG00005004016	ARHGAP19 (ENSLCRG00005004020)	slit1a (ENSLCRG00005004050)	ENSLCRG00005010311	ENSLCRG00005010312	ENSLCRG00005010313	ANKRD2 (ENSLCRG00005010315)	st3gal7 (ENSLCRG00005010316)	hps1 (ENSLCRG00005010318) #18	HPSE2 (ENSLCRG00005010325) #19	CNNM1 (ENSLCRG00005010328) #20	got1 (ENSLCRG00005010334) ##21	nkx2.3 (ENSLCRG00005010397) #22	nkx3.3 (ENSLCRG00005010398)	slc25a28 (ENSLCRG00005010400) #23	pyroxd2 (ENSLCRG00005010402)	zgc:123010 (ENSLCRG00005010405)	LOXL4 (ENSLCRG00005010408) #16	CRTAC1 (ENSLCRG00005010413) #14	golga7ba (ENSLCRG00005010435) #13	sfrp5 (ENSLCRG00005010438) #12	zgc:171482 (ENSLCRG00005010440)	ENSLCRG00005010441	ENSLCRG00005010442	marveld1 (ENSLCRG00005010443) #10	pgam1a (ENSLCRG00005010445)	ENSLCRG00005010450	ENSLCRG00005010452
Gilthead seabream	MODERN SPECIES	6	cutc (ENSSAUG00010024734) #26	ENSSAUG00010020216	ENSSAUG00010020066	ARHGAP19 (ENSSAUG00010020061)	slit1a (ENSSAUG00010013534)	ENSSAUG00010013456	ENSSAUG00010013452	ENSSAUG00010013450	ENSSAUG00010013448	ANKRD2 (ENSSAUG00010013445)	st3gal7 (ENSSAUG00010013443)	hps1 (ENSSAUG00010013439) #18	HPSE2 (ENSSAUG00010013432) #19	CNNM1 (ENSSAUG00010013427) #20	got1 (ENSSAUG00010013416) ##21	nkx2.3 (ENSSAUG00010013411) #22	nkx3.3 (ENSSAUG00010013410)	slc25a28 (ENSSAUG00010013405) #23	pyroxd2 (ENSSAUG00010013150)	zgc:123010 (ENSSAUG00010013149)	LOXL4 (ENSSAUG00010013108) #16	CRTAC1 (ENSSAUG00010013019) #14	golga7ba (ENSSAUG00010013014) #13	sfrp5 (ENSSAUG00010013011) #12	zgc:171482 (ENSSAUG00010026024)	ENSSAUG00010026023	ENSSAUG00010026022	ENSSAUG00010026021	marveld1 (ENSSAUG00010026020) #10	pgam1a (ENSSAUG00010026018)	ENSSAUG00010026015
Perciformes	ANCESTRAL SPECIES	17	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00970000193827	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b
Cottioidei	ANCESTRAL SPECIES	17	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000162611.b	ENSGT00940000168493	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Stickleback	MODERN SPECIES	6	ENSGACG00000007331	HPS6 (ENSGACG00000007363)	KCNIP2 (ENSGACG00000007366)	cox15 (ENSGACG00000007381) #25	cutc (ENSGACG00000007400) #26	ENSGACG00000007419	ARHGAP19 (ENSGACG00000007432)	slit1a (ENSGACG00000007441)	ENSGACG00000007469	ENSGACG00000007479	st3gal7 (ENSGACG00000007489)	hps1 (ENSGACG00000007506) #18	HPSE2 (ENSGACG00000007523) #19	CNNM1 (ENSGACG00000007529) #20	got1 (ENSGACG00000007534) ##21	nkx2.3 (ENSGACG00000007568) #22	nkx3.3 (ENSGACG00000007573)	slc25a28 (ENSGACG00000007574) #23	pyroxd2 (ENSGACG00000007586)	zgc:123010 (ENSGACG00000007620)	LOXL4 (ENSGACG00000007635) #16	CRTAC1 (ENSGACG00000007647) #14	golga7ba (ENSGACG00000007656) #13	sfrp5 (ENSGACG00000007665) #12	zgc:171482 (ENSGACG00000007680)	ENSGACG00000007685	marveld1 (ENSGACG00000007690) #10	pgam1a (ENSGACG00000007692)	ENSGACG00000007703	ENSGACG00000007709	zfand4 (ENSGACG00000007740)
Perciformes_a	ANCESTRAL SPECIES	16	ENSGT00390000002223 #25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00970000193827	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Channel bull blenny	MODERN SPECIES	6	cutc (ENSCGOG00000012293) #26	ENSCGOG00000012388	ENSCGOG00000012557	ARHGAP19 (ENSCGOG00000012563)	slit1a (ENSCGOG00000012624)	ENSCGOG00000014769	ENSCGOG00000014770	ENSCGOG00000014773	ENSCGOG00000014776	ANKRD2 (ENSCGOG00000014778)	st3gal7 (ENSCGOG00000014779)	hps1 (ENSCGOG00000014792) #18	HPSE2 (ENSCGOG00000014794) #19	CNNM1 (ENSCGOG00000014819) #20	got1 (ENSCGOG00000014821) ##21	nkx2.3 (ENSCGOG00000014865) #22	nkx3.3 (ENSCGOG00000014866)	slc25a28 (ENSCGOG00000014869) #23	pyroxd2 (ENSCGOG00000014876)	zgc:123010 (ENSCGOG00000015095)	LOXL4 (ENSCGOG00000015110) #16	CRTAC1 (ENSCGOG00000015313) #14	golga7ba (ENSCGOG00000015325) #13	sfrp5 (ENSCGOG00000015328) #12	zgc:171482 (ENSCGOG00000015332)	ENSCGOG00000015336	marveld1 (ENSCGOG00000015344) #10	pgam1a (ENSCGOG00000015347)	ENSCGOG00000015371	ENSCGOG00000015373	zfand4 (ENSCGOG00000015392)
Pike perch	MODERN SPECIES	10	cox15 (ENSSLUG00000008671) #25	cutc (ENSSLUG00000008760) #26	ENSSLUG00000009434	ENSSLUG00000020904	ARHGAP19 (ENSSLUG00000020919)	slit1a (ENSSLUG00000021011)	ENSSLUG00000021178	ENSSLUG00000021182	morn4 (ENSSLUG00000021185) #7	ENSSLUG00000021193	st3gal7 (ENSSLUG00000021200)	hps1 (ENSSLUG00000021216) #18	HPSE2 (ENSSLUG00000021232) #19	CNNM1 (ENSSLUG00000021240) #20	got1 (ENSSLUG00000021245) ##21	nkx2.3 (ENSSLUG00000021254) #22	nkx3.3 (ENSSLUG00000021257)	slc25a28 (ENSSLUG00000021260) #23	pyroxd2 (ENSSLUG00000021277)	zgc:123010 (ENSSLUG00000021394)	LOXL4 (ENSSLUG00000021403) #16	CRTAC1 (ENSSLUG00000021425) #14	golga7ba (ENSSLUG00000021452) #13	sfrp5 (ENSSLUG00000021464) #12	zgc:171482 (ENSSLUG00000021467)	ENSSLUG00000021470	marveld1 (ENSSLUG00000021471) #10	ENSSLUG00000021474	ENSSLUG00000021479	ENSSLUG00000021496	zfand4 (ENSSLUG00000021516)
Ballan wrasse	MODERN SPECIES	380							slit1a (ENSLBEG00000024535)	ENSLBEG00000024501	morn4 (ENSLBEG00000024479) #7	ANKRD2 (ENSLBEG00000024460)	st3gal7 (ENSLBEG00000024440)	hps1 (ENSLBEG00000024384) #18	HPSE2 (ENSLBEG00000024286) #19	CNNM1 (ENSLBEG00000024249) #20	ENSLBEG00000024221	nkx2.3 (ENSLBEG00000024213) #22	nkx3.3 (ENSLBEG00000024201)	got1 (ENSLBEG00000024148) ##21	slc25a28 (ENSLBEG00000024105) #23	pyroxd2 (ENSLBEG00000024045)	zgc:123010 (ENSLBEG00000023984)	ENSLBEG00000023958 #16	ENSLBEG00000023931 #16	CRTAC1 (ENSLBEG00000023893) #14	golga7ba (ENSLBEG00000023858) #13	sfrp5 (ENSLBEG00000023832) #12	zgc:171482 (ENSLBEG00000023823)
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Carangaria	ANCESTRAL SPECIES	19	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000162611.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Pleuronectoidei	ANCESTRAL SPECIES	25	ENSGT00390000008454 #26	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00940000177979	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Turbot	MODERN SPECIES	6	ENSSMAG00000003608 #25	ENSSMAG00000003582 #26	ENSSMAG00000003547	ARHGAP19 (ENSSMAG00000003538)	ENSSMAG00000003352	ENSSMAG00000003340	ENSSMAG00000003337	morn4 (ENSSMAG00000003311) #7	ENSSMAG00000003260	st3gal7 (ENSSMAG00000003246)	hps1 (ENSSMAG00000003230) #18	HPSE2 (ENSSMAG00000003124) #19	CNNM1 (ENSSMAG00000003081) #20	ENSSMAG00000003068	got1 (ENSSMAG00000003052) ##21	nkx2.3 (ENSSMAG00000003048) #22	nkx3.3 (ENSSMAG00000027149)	slc25a28 (ENSSMAG00000003030) #23	pyroxd2 (ENSSMAG00000002980)	zgc:123010 (ENSSMAG00000002904)	LOXL4 (ENSSMAG00000002844) #16	CRTAC1 (ENSSMAG00000002780) #14	GOLGA7B (ENSSMAG00000030452) #13	sfrp5 (ENSSMAG00000002734) #12	zgc:171482 (ENSSMAG00000002715)	ENSSMAG00000002708	ENSSMAG00000002697 #10	ENSSMAG00000002692	ENSSMAG00000024696	ENSSMAG00000002635	ENSSMAG00000002473
Tongue sole	MODERN SPECIES	3	GPR75 (ENSCSEG00000006128)	erlec1 (ENSCSEG00000006132)	nrxn1b (ENSCSEG00000006156)	ENSCSEG00000006277	ENSCSEG00000006279	ENSCSEG00000006282	gtf2a1l (ENSCSEG00000006290)	ENSCSEG00000006294	morn4 (ENSCSEG00000006299) #7	ANKRD2 (ENSCSEG00000006304)	st3gal7 (ENSCSEG00000006314)	hps1 (ENSCSEG00000006320) #18	HPSE2 (ENSCSEG00000006339) #19	CNNM1 (ENSCSEG00000006403) #20	got1 (ENSCSEG00000006415) ##21	nkx2.3 (ENSCSEG00000006432) #22	nkx3.3 (ENSCSEG00000006437)	slc25a28 (ENSCSEG00000006441) #23	pyroxd2 (ENSCSEG00000006444)	zgc:123010 (ENSCSEG00000006468)	LOXL4 (ENSCSEG00000006478) #16	CRTAC1 (ENSCSEG00000006493) #14	golga7ba (ENSCSEG00000006502) #13	sfrp5 (ENSCSEG00000006506) #12	zgc:171482 (ENSCSEG00000006509)	ENSCSEG00000006514	marveld1 (ENSCSEG00000006515) #10	PGAM1 (ENSCSEG00000006519)	ENSCSEG00000006534	ENSCSEG00000006553	zfand4 (ENSCSEG00000006564)
Carangaria_A	ANCESTRAL SPECIES	25							ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Seriola	ANCESTRAL SPECIES	17							ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Yellowtail amberjack	MODERN SPECIES	2713								ENSSLDG00000019112	morn4 (ENSSLDG00000019122) #7	ENSSLDG00000019138	st3gal7 (ENSSLDG00000019183)	hps1 (ENSSLDG00000019199) #18	HPSE2 (ENSSLDG00000019240) #19	CNNM1 (ENSSLDG00000019278) #20	got1 (ENSSLDG00000019291) ##21	nkx2.3 (ENSSLDG00000019312) #22	nkx3.3 (ENSSLDG00000019317)	slc25a28 (ENSSLDG00000019324) #23	pyroxd2 (ENSSLDG00000019341)	zgc:123010 (ENSSLDG00000019386)	ENSSLDG00000019427 #16	ENSSLDG00000019436 #16	CRTAC1 (ENSSLDG00000019460) #14	golga7ba (ENSSLDG00000019486) #13	sfrp5 (ENSSLDG00000019498) #12	zgc:171482 (ENSSLDG00000019510)	ENSSLDG00000019520	marveld1 (ENSSLDG00000019528) #10	pgam1a (ENSSLDG00000019539)	ENSSLDG00000019544	ENSSLDG00000019605
Greater amberjack	MODERN SPECIES	147							ENSSDUG00000008108	ENSSDUG00000008112	morn4 (ENSSDUG00000008122) #7	ENSSDUG00000008145	st3gal7 (ENSSDUG00000008206)	hps1 (ENSSDUG00000008227) #18	HPSE2 (ENSSDUG00000008325) #19	CNNM1 (ENSSDUG00000008497) #20	got1 (ENSSDUG00000008579) ##21	nkx2.3 (ENSSDUG00000008599) #22	nkx3.3 (ENSSDUG00000008602)	slc25a28 (ENSSDUG00000008608) #23	pyroxd2 (ENSSDUG00000008623)	zgc:123010 (ENSSDUG00000008651)	ENSSDUG00000008672 #16	ENSSDUG00000008685 #16	CRTAC1 (ENSSDUG00000008706) #14	golga7ba (ENSSDUG00000008742) #13	sfrp5 (ENSSDUG00000008758) #12	zgc:171482 (ENSSDUG00000008773)	ENSSDUG00000008786	marveld1 (ENSSDUG00000008794) #10	pgam1a (ENSSDUG00000008810)	ENSSDUG00000008825	ENSSDUG00000008867
Barramundi perch	MODERN SPECIES	14	zc3h12ab (ENSLCAG00010004058)	ENSLCAG00010004066	oscp1a (ENSLCAG00010004068)	LSM10 (ENSLCAG00010004071)	ENSLCAG00010004074	map7d1b (ENSLCAG00010004081)	ENSLCAG00010004083	ENSLCAG00010004086	morn4 (ENSLCAG00010004090) #7	ENSLCAG00010004098	st3gal7 (ENSLCAG00010004103)	hps1 (ENSLCAG00010004110) #18	HPSE2 (ENSLCAG00010004113) #19	CNNM1 (ENSLCAG00010004120) #20	got1 (ENSLCAG00010004125) ##21	nkx2.3 (ENSLCAG00010004130) #22	nkx3.3 (ENSLCAG00010004133)	slc25a28 (ENSLCAG00010004135) #23	pyroxd2 (ENSLCAG00010004145)	zgc:123010 (ENSLCAG00010004184)	LOXL4 (ENSLCAG00010004189) #16	CRTAC1 (ENSLCAG00010004209) #14	golga7ba (ENSLCAG00010004221) #13	sfrp5 (ENSLCAG00010004224) #12	zgc:171482 (ENSLCAG00010004228)	ENSLCAG00010004232	marveld1 (ENSLCAG00010004234) #10	pgam1a (ENSLCAG00010004235)	ENSLCAG00010004237	ENSLCAG00010004244	zfand4 (ENSLCAG00010004251)
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000168493	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000177979	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00970000193827	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Zig-zag eel	MODERN SPECIES	6	ENSMAMG00000002346 #26	ENSMAMG00000001950	ENSMAMG00000001887	ARHGAP19 (ENSMAMG00000001865)	ENSMAMG00000001778	ENSMAMG00000001729	ENSMAMG00000028573	ENSMAMG00000027836	morn4 (ENSMAMG00000001711) #7	ENSMAMG00000001686	st3gal7 (ENSMAMG00000001658)	hps1 (ENSMAMG00000001615) #18	HPSE2 (ENSMAMG00000001454) #19	CNNM1 (ENSMAMG00000001389) #20	got1 (ENSMAMG00000001359) ##21	nkx2.3 (ENSMAMG00000001312) #22	nkx3.3 (ENSMAMG00000001296)	slc25a28 (ENSMAMG00000001280) #23	pyroxd2 (ENSMAMG00000001200)	zgc:123010 (ENSMAMG00000001145)	LOXL4 (ENSMAMG00000001127) #16	CRTAC1 (ENSMAMG00000001076) #14	GOLGA7B (ENSMAMG00000024613) #13	sfrp5 (ENSMAMG00000001048) #12	zgc:171482 (ENSMAMG00000001031)	ENSMAMG00000001014	ENSMAMG00000000923 #10	ENSMAMG00000000913	ENSMAMG00000000839	ENSMAMG00000000703	ZFAND4 (ENSMAMG00000000662)
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00940000164383	ENSGT01100000263518.A.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00940000162611.b	ENSGT00940000168493	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000177979	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00940000164861	ENSGT00940000161036.B.a	ENSGT00940000157042.c.a #16	ENSGT00390000013726.c #14	ENSGT00390000000134.a.d #13	ENSGT00940000160608 #12	ENSGT00940000165757.d	ENSGT00970000193827	ENSGT00510000049375 #10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716
Climbing perch	MODERN SPECIES	6	ENSATEG00000000233 #25	ENSATEG00000000242 #26	ENSATEG00000000283	ENSATEG00000000291	ARHGAP19 (ENSATEG00000000347)	ENSATEG00000000357	ENSATEG00000000527	ENSATEG00000000532	ENSATEG00000029114	ENSATEG00000000577	st3gal7 (ENSATEG00000000723)	hps1 (ENSATEG00000000728) #18	HPSE2 (ENSATEG00000000880) #19	CNNM1 (ENSATEG00000000944) #20	got1 (ENSATEG00000001085) ##21	nkx2.3 (ENSATEG00000001133) #22	nkx3.3 (ENSATEG00000028419)	slc25a28 (ENSATEG00000001143) #23	pyroxd2 (ENSATEG00000001168)	zgc:123010 (ENSATEG00000001220)	LOXL4 (ENSATEG00000001230) #16	CRTAC1 (ENSATEG00000001284) #14	GOLGA7B (ENSATEG00000027423) #13	sfrp5 (ENSATEG00000001362) #12	ENSATEG00000025382	zgc:171482 (ENSATEG00000001371)	ENSATEG00000001393	ENSATEG00000001419 #10	ENSATEG00000001446	ENSATEG00000001472	ENSATEG00000001486
Siamese fighting fish	DUPLICATION
Siamese fighting fish	MODERN SPECIES	6	ENSBSLG00000020803	ENSBSLG00000020808	ANKRD2 (ENSBSLG00000020811)	st3gal7 (ENSBSLG00000020817)	hps1 (ENSBSLG00000020826) #18	HPSE2 (ENSBSLG00000021110) #19	CNNM1 (ENSBSLG00000021316) #20	got1 (ENSBSLG00000021411) ##21	ENSBSLG00000021518	nkx2.3 (ENSBSLG00000021528) #22	nkx3.3 (ENSBSLG00000021543)	slc25a28 (ENSBSLG00000021560) #23	pyroxd2 (ENSBSLG00000021593)	zgc:123010 (ENSBSLG00000021603)	ENSBSLG00000021637	nkx2.3 (ENSBSLG00000021639) #22	nkx3.3 (ENSBSLG00000021640)	slc25a28 (ENSBSLG00000021642) #23	pyroxd2 (ENSBSLG00000021658)	LOXL4 (ENSBSLG00000021670) #16	CRTAC1 (ENSBSLG00000021687) #14	golga7ba (ENSBSLG00000022031) #13	sfrp5 (ENSBSLG00000022037) #12	zgc:171482 (ENSBSLG00000022050)	ENSBSLG00000022054	ENSBSLG00000022068	marveld1 (ENSBSLG00000022078) #10	pgam1a (ENSBSLG00000022085)	ENSBSLG00000022097	ENSBSLG00000022115	zfand4 (ENSBSLG00000022171)
Siamese fighting fish	MODERN SPECIES	6	ENSBSLG00000017804	ENSBSLG00000020035	ARHGAP19 (ENSBSLG00000020038)	slit1a (ENSBSLG00000020170)	ENSBSLG00000020796	ENSBSLG00000020797	ENSBSLG00000020803	ENSBSLG00000020808	ANKRD2 (ENSBSLG00000020811)	st3gal7 (ENSBSLG00000020817)	hps1 (ENSBSLG00000020826) #18	HPSE2 (ENSBSLG00000021110) #19	CNNM1 (ENSBSLG00000021316) #20	got1 (ENSBSLG00000021411) ##21	ENSBSLG00000021518	nkx2.3 (ENSBSLG00000021528) #22	nkx3.3 (ENSBSLG00000021543)	slc25a28 (ENSBSLG00000021560) #23	pyroxd2 (ENSBSLG00000021593)	zgc:123010 (ENSBSLG00000021603)	ENSBSLG00000021637	nkx2.3 (ENSBSLG00000021639) #22	nkx3.3 (ENSBSLG00000021640)	slc25a28 (ENSBSLG00000021642) #23	pyroxd2 (ENSBSLG00000021658)	LOXL4 (ENSBSLG00000021670) #16	CRTAC1 (ENSBSLG00000021687) #14	golga7ba (ENSBSLG00000022031) #13	sfrp5 (ENSBSLG00000022037) #12	zgc:171482 (ENSBSLG00000022050)	ENSBSLG00000022054
Pinecone sodierfish	MODERN SPECIES	6	cutc (ENSMMDG00005011130) #26	ENSMMDG00005009844	ENSMMDG00005009779	ARHGAP19 (ENSMMDG00005009773)	slit1a (ENSMMDG00005009763)	ENSMMDG00005009753	ENSMMDG00005009752	ENSMMDG00005009749	morn4 (ENSMMDG00005009747) #7	ENSMMDG00005009745	st3gal7 (ENSMMDG00005009720)	hps1 (ENSMMDG00005009716) #18	HPSE2 (ENSMMDG00005009712) #19	CNNM1 (ENSMMDG00005009709) #20	got1 (ENSMMDG00005009694) ##21	nkx2.3 (ENSMMDG00005009689) #22	nkx3.3 (ENSMMDG00005009687)	slc25a28 (ENSMMDG00005009667) #23	pyroxd2 (ENSMMDG00005009398)	zgc:123010 (ENSMMDG00005009376)	LOXL4 (ENSMMDG00005008634) #16	CRTAC1 (ENSMMDG00005008370) #14	golga7ba (ENSMMDG00005008357) #13	sfrp5 (ENSMMDG00005008355) #12	zgc:171482 (ENSMMDG00005008352)	ENSMMDG00005008349	marveld1 (ENSMMDG00005008346) #10	pi4k2a (ENSMMDG00005008344) #8	ENSMMDG00005008342	ENSMMDG00005008337	ENSMMDG00005008329
Cod	MODERN SPECIES	6	ENSGMOG00000018132 #25	ENSGMOG00000018146 #26	ENSGMOG00000018157	ENSGMOG00000025467	ENSGMOG00000018205	ENSGMOG00000018219	ENSGMOG00000027692	ENSGMOG00000027846	morn4 (ENSGMOG00000033836) #7	ENSGMOG00000022190	st3gal7 (ENSGMOG00000026694)	hps1 (ENSGMOG00000018315) #18	HPSE2 (ENSGMOG00000018343) #19	ENSGMOG00000025126 #20	got1 (ENSGMOG00000018387) ##21	nkx2.3 (ENSGMOG00000035037) #22	nkx3.3 (ENSGMOG00000031636)	slc25a28 (ENSGMOG00000011952) #23	pyroxd2 (ENSGMOG00000018441)	zgc:123010 (ENSGMOG00000018473)	ENSGMOG00000030895 #16	zgc:171482 (ENSGMOG00000010508)	ENSGMOG00000030430
Protacanthopterygii	ANCESTRAL SPECIES	9	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b	ENSGT00940000153408.A	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a	ENSGT00940000154965.A	ENSGT00940000162611.a.a.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000015298 #18	ENSGT00390000004874.a.a.tb #19	ENSGT00940000157525.b #20	ENSGT00950000183082.b.b.a.a ##21	ENSGT00940000157556.a.b #22	ENSGT00940000165452.a	ENSGT00940000157049.c #23	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00730000112219	ENSGT00510000049375 #10	ENSGT00940000165757.d.m.b	ENSGT00940000165757.c.a	ENSGT00940000160608 #12	ENSGT00390000000134.a.d.b.a.b.a #13	ENSGT00390000013726.c #14	ENSGT00940000157042.c.a.x #16	ENSGT00940000157042.c.a.w #16	ENSGT00940000161036.B.a	ENSGT00940000164861
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	235	ENSGT00390000004874.a.a.ub #19	ENSGT00940000157525.b.d #20	ENSGT00950000183082.b.b.a.a.d.b ##21	ENSGT00940000157556.a.b.f #22	ENSGT00940000165452.a.h	ENSGT00940000157049.c.b.b #23	ENSGT00530000064017.a.f	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00390000010434.b.d.b #8	ENSGT00510000049375.g #10	ENSGT00940000163723.A.f.a	ENSGT00390000015298 #18	ENSGT00390000004874.a.a.tb #19	ENSGT00940000157525.b.c #20	ENSGT00950000183082.b.b.a.a.d.a ##21	ENSGT00940000157556.a.b.e #22	ENSGT00940000165452.a.g	ENSGT00940000157049.c.a #23	ENSGT00530000064017.a.e	ENSGT00950000182926.b.d.a.a.b.g	ENSGT00390000010434.b.d.a #8	ENSGT00730000112219	ENSGT00510000049375.h #10	ENSGT00940000165757.d.m.b	ENSGT00940000165757.c.a	ENSGT00940000160608.e #12	ENSGT00390000000134.a.d.b.a.b.a #13	ENSGT00390000013726.c #14	ENSGT00940000157042.c.a.x #16	ENSGT00940000161036.B.a.c	ENSGT00940000164861
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00940000166866.c	ENSGT00390000017590.c	ENSGT00940000155064.m	ENSGT00390000009790.c	ENSGT00940000157134.g	ENSGT00950000183045.A.a.b	ENSGT00940000153408.A.ab.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a.e.a.b	ENSGT00940000154965.A.b	ENSGT00940000162611.a.a.b.a	ENSGT00390000015298 #18	ENSGT00390000004874.a.a.tb #19	ENSGT00940000157525.b.c #20	ENSGT00950000183082.b.b.a.a.d.a ##21	ENSGT00940000157556.a.b.e #22	ENSGT00940000165452.a.g	ENSGT00940000157049.c.a #23	ENSGT00530000064017.a.e	ENSGT00950000182926.b.d.a.a.b.g	ENSGT00390000010434.b.d.a #8	ENSGT00730000112219	ENSGT00510000049375.h #10	ENSGT00940000165757.d.m.b	ENSGT00940000165757.c.a.a	ENSGT00940000160608.e #12	ENSGT00390000000134.a.d.b.a.b.a #13	ENSGT00390000013726.c #14	ENSGT00940000157042.c.a.x #16	ENSGT00940000161036.B.a.c	ENSGT00940000164861
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00940000166866.c	ENSGT00390000017590.c	ENSGT00940000155064.m	ENSGT00390000009790.c	ENSGT00940000157134.g	ENSGT00950000183045.A.a.b	ENSGT00940000153408.A.ab.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a.e.a.a.a	ENSGT00940000154965.A.b	ENSGT00940000162611.a.a.b.a	ENSGT00390000015298 #18	ENSGT00390000004874.a.a.tb #19	ENSGT00940000157525.b.c #20	ENSGT00950000183082.b.b.a.a.d.a ##21	ENSGT00940000157556.a.b.e #22	ENSGT00940000165452.a.g	ENSGT00940000157049.c.a #23	ENSGT00530000064017.a.e	ENSGT00950000182926.b.d.a.a.b.g	ENSGT00390000010434.b.d.a #8	ENSGT00730000112219	ENSGT00510000049375.h #10	ENSGT00940000165757.d.m.b	ENSGT00940000165757.c.a.a	ENSGT00940000160608.e #12	ENSGT00390000000134.a.d.b.a.b.a #13	ENSGT00390000013726.c #14	ENSGT00940000157042.c.a.x #16	ENSGT00940000161036.B.a.c	ENSGT00940000164861
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00940000166866.c	ENSGT00390000017590.c	ENSGT00940000155064.m	ENSGT00390000009790.c	ENSGT00940000157134.g	ENSGT00950000183045.A.a.b	ENSGT00940000153408.A.ab.b	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a.e.a.a.a	ENSGT00940000154965.A.b	ENSGT00940000162611.a.a.b.a	ENSGT00390000015298 #18	ENSGT00390000004874.a.a.tb #19	ENSGT00940000157525.b.c #20	ENSGT00950000183082.b.b.a.a.d.a ##21	ENSGT00940000157556.a.b.e #22	ENSGT00940000165452.a.g	ENSGT00940000157049.c.a #23	ENSGT00530000064017.a.e	ENSGT00950000182926.b.d.a.a.b.g	ENSGT00390000010434.b.d.a #8	ENSGT00510000049375.h #10	ENSGT00940000165757.d.m.b	ENSGT00940000165757.c.a.a	ENSGT00940000160608.e #12	ENSGT00390000000134.a.d.b.a.b.a #13	ENSGT00390000013726.c #14	ENSGT00940000157042.c.a.x #16	ENSGT00940000161036.B.a.c	ENSGT00940000164861	ENSGT00390000007125.a.c.b
Chinook salmon	MODERN SPECIES		ENSOTSG00005007677	bag2 (ENSOTSG00005007675)	rab23 (ENSOTSG00005007673)	prim2 (ENSOTSG00005007670)	khdrbs2 (ENSOTSG00005007669)	ENSOTSG00005007655	XPO5 (ENSOTSG00005005617)	ARHGAP19 (ENSOTSG00005005585)	ENSOTSG00005005584	ENSOTSG00005005583	ENSOTSG00005005582	hps1 (ENSOTSG00005005581) #18	HPSE2 (ENSOTSG00005034782) #19	CNNM1 (ENSOTSG00005034781) #20	got1 (ENSOTSG00005034780) ##21	nkx2.3 (ENSOTSG00005034778) #22	nkx3.3 (ENSOTSG00005034773)	slc25a28 (ENSOTSG00005034771) #23	ENSOTSG00005034758	ENSOTSG00005034757	pi4k2a (ENSOTSG00005034743) #8	marveld1 (ENSOTSG00005034739) #10	ENSOTSG00005034738	zgc:171482 (ENSOTSG00005034736)	sfrp5 (ENSOTSG00005034735) #12	golga7ba (ENSOTSG00005034732) #13	CRTAC1 (ENSOTSG00005034724) #14	LOXL4 (ENSOTSG00005034720) #16	zgc:123010 (ENSOTSG00005034718)	pyroxd2 (ENSOTSG00005034694)	ENSOTSG00005034693
Coho salmon	MODERN SPECIES	2	ENSOKIG00005046062	bag2 (ENSOKIG00005046067)	rab23 (ENSOKIG00005046082)	prim2 (ENSOKIG00005046100)	khdrbs2 (ENSOKIG00005046157)	ENSOKIG00005046187	XPO5 (ENSOKIG00005046247)	ARHGAP19 (ENSOKIG00005046354)	slit1a (ENSOKIG00005046443)	ENSOKIG00005046888	ENSOKIG00005046894	hps1 (ENSOKIG00005046906) #18	HPSE2 (ENSOKIG00005046923) #19	CNNM1 (ENSOKIG00005046942) #20	got1 (ENSOKIG00005046953) ##21	nkx2.3 (ENSOKIG00005001956) #22	nkx3.3 (ENSOKIG00005001963)	slc25a28 (ENSOKIG00005001976) #23	ENSOKIG00005001992	ENSOKIG00005002018	PI4K2A (ENSOKIG00005002051) #8	marveld1 (ENSOKIG00005002094) #10	zgc:171482 (ENSOKIG00005002110)	sfrp5 (ENSOKIG00005002138) #12	golga7ba (ENSOKIG00005002166) #13	CRTAC1 (ENSOKIG00005002299) #14	LOXL4 (ENSOKIG00005002470) #16	zgc:123010 (ENSOKIG00005002515)	pyroxd2 (ENSOKIG00005002542)	ENSOKIG00005002606	SEMA4G (ENSOKIG00005002624)
Rainbow trout	MODERN SPECIES	15	ENSOMYG00000051765	prim2 (ENSOMYG00000036018)	ENSOMYG00000063102	KHDRBS2 (ENSOMYG00000035964)	ENSOMYG00000056476	ENSOMYG00000034753	ARHGAP19 (ENSOMYG00000034469)	ENSOMYG00000054411	ENSOMYG00000024345	ENSOMYG00000022554	ENSOMYG00000022546	hps1 (ENSOMYG00000022522) #18	HPSE2 (ENSOMYG00000022482) #19	CNNM1 (ENSOMYG00000022440) #20	got1 (ENSOMYG00000022428) ##21	nkx2.3 (ENSOMYG00000022417) #22	nkx3.3 (ENSOMYG00000022398)	slc25a28 (ENSOMYG00000022375) #23	ENSOMYG00000022351	ENSOMYG00000022339	ENSOMYG00000022064 #8	ENSOMYG00000055216	marveld1 (ENSOMYG00000021995) #10	ENSOMYG00000062940	ENSOMYG00000050779	zgc:171482 (ENSOMYG00000021987)	sfrp5 (ENSOMYG00000021969) #12	ENSOMYG00000062644	ENSOMYG00000069969	GOLGA7B (ENSOMYG00000051786) #13	CRTAC1 (ENSOMYG00000021911) #14
Salmo	ANCESTRAL SPECIES	23	ENSGT00940000166866.c	ENSGT00390000017590.c	ENSGT00940000155064.m	ENSGT00390000009790.c	ENSGT00940000157134.g	ENSGT00950000183045.A.a.b	ENSGT00940000153408.A.ab.a.a	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a.e.a.b	ENSGT00940000154965.A.b	ENSGT00940000162611.a.a.b.a	ENSGT00390000015298 #18	ENSGT00390000004874.a.a.tb #19	ENSGT00940000157525.b.c #20	ENSGT00950000183082.b.b.a.a.d.a ##21	ENSGT00940000157556.a.b.e #22	ENSGT00940000165452.a.g	ENSGT00940000157049.c.a #23	ENSGT00530000064017.a.e	ENSGT00950000182926.b.d.a.a.b.g	ENSGT00390000010434.b.d.a #8	ENSGT00510000049375.h #10	ENSGT00940000165757.d.m.b	ENSGT00940000165757.c.a.a	ENSGT00940000160608.e #12	ENSGT00390000000134.a.d.b.a.b.a #13	ENSGT00390000013726.c #14	ENSGT00940000157042.c.a.x #16	ENSGT00940000161036.B.a.c	ENSGT00940000164861	ENSGT00390000007125.a.c.b
Atlantic salmon	MODERN SPECIES		bag2 (ENSSSAG00000001893)	rab23 (ENSSSAG00000092471)	prim2 (ENSSSAG00000001875)	KHDRBS2 (ENSSSAG00000001861)	ENSSSAG00000001853	ENSSSAG00000077679	ARHGAP19 (ENSSSAG00000001541)	ENSSSAG00000001168	ENSSSAG00000088082	ENSSSAG00000113366	ENSSSAG00000093017	hps1 (ENSSSAG00000001071) #18	HPSE2 (ENSSSAG00000114675) #19	CNNM1 (ENSSSAG00000075572) #20	got1 (ENSSSAG00000075564) ##21	nkx2-3 (ENSSSAG00000001022) #22	nkx3.3 (ENSSSAG00000001020)	slc25a28 (ENSSSAG00000096756) #23	ENSSSAG00000001009	pgam1 (ENSSSAG00000001006)	ENSSSAG00000075457 #8	ENSSSAG00000120201	zgc:171482 (ENSSSAG00000000977)	sfrp5 (ENSSSAG00000122261) #12	ENSSSAG00000085188	ENSSSAG00000000967 #13	ENSSSAG00000116855	ENSSSAG00000113491	crtac1 (ENSSSAG00000000725) #14	LOXL4 (ENSSSAG00000000522) #16	zgc:123010 (ENSSSAG00000000491)
River trout	MODERN SPECIES	9	bag2 (ENSSTUG00000045751)	ENSSTUG00000045744	rab23 (ENSSTUG00000045730)	prim2 (ENSSTUG00000045651)	khdrbs2 (ENSSTUG00000045622)	ENSSTUG00000045608	XPO5 (ENSSTUG00000045278)	ARHGAP19 (ENSSTUG00000045255)	slit1a (ENSSTUG00000033922)	ENSSTUG00000033530	ENSSTUG00000033539	hps1 (ENSSTUG00000033428) #18	HPSE2 (ENSSTUG00000033415) #19	CNNM1 (ENSSTUG00000030339) #20	got1 (ENSSTUG00000030324) ##21	nkx2.3 (ENSSTUG00000030317) #22	nkx3.3 (ENSSTUG00000030314)	slc25a28 (ENSSTUG00000030300) #23	ENSSTUG00000030279	ENSSTUG00000030263	pi4k2a (ENSSTUG00000030160) #8	marveld1 (ENSSTUG00000030144) #10	ENSSTUG00000030137	zgc:171482 (ENSSTUG00000030120)	sfrp5 (ENSSTUG00000030084) #12	golga7ba (ENSSTUG00000030070) #13	CRTAC1 (ENSSTUG00000029788) #14	LOXL4 (ENSSTUG00000029733) #16	zgc:123010 (ENSSTUG00000029719)	pyroxd2 (ENSSTUG00000029431)	ENSSTUG00000029406
Huchen	MODERN SPECIES	1252								slit1a (ENSHHUG00000023415)	ENSHHUG00000023406	morn4 (ENSHHUG00000023402) #7	hps1 (ENSHHUG00000023384) #18	HPSE2 (ENSHHUG00000023373) #19	CNNM1 (ENSHHUG00000023364) #20	ENSHHUG00000023347	got1 (ENSHHUG00000023333) ##21	nkx2.3 (ENSHHUG00000023329) #22	nkx3.3 (ENSHHUG00000023327)	ENSHHUG00000023326
Salmoninae	ANCESTRAL SPECIES	235		ENSGT00940000153408.A.ab.a.a	ENSGT00940000157331.b.b	ENSGT00940000157322.b.a.e.a.b	ENSGT00940000154965.A.b	ENSGT00940000162611.a.a.b.a	ENSGT00940000157322.b.a.e.b	ENSGT00940000154965.A.a	ENSGT00940000162611.a.a.b.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000004874.a.a.ub #19	ENSGT00940000157525.b.d #20	ENSGT00950000183082.b.b.a.a.d.b ##21	ENSGT00940000157556.a.b.f #22	ENSGT00940000165452.a.h	ENSGT00940000157049.c.b.b #23	ENSGT00530000064017.a.f	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00390000010434.b.d.b #8	ENSGT00510000049375.g #10	ENSGT00940000163723.A.f.a	ENSGT00390000015298 #18	ENSGT00390000004874.a.a.tb #19	ENSGT00940000157525.b.c #20	ENSGT00950000183082.b.b.a.a.d.a ##21	ENSGT00940000157556.a.b.e #22	ENSGT00940000165452.a.g	ENSGT00940000157049.c.a #23	ENSGT00530000064017.a.e
Huchen	MODERN SPECIES	1163													ENSHHUG00000003429 #19	ENSHHUG00000003432	got1 (ENSHHUG00000003443) ##21	nkx2.3 (ENSHHUG00000003468) #22	nkx3.3 (ENSHHUG00000003474)	ENSHHUG00000003480
Salmoninae_a	ANCESTRAL SPECIES	38	ENSGT00940000155064.n	ENSGT00390000009790.d	ENSGT00940000157134.h.a	ENSGT00940000153408.A.`b	ENSGT00970000193390.c.a.b.a.a.a	ENSGT00940000157322.b.a.e.b	ENSGT00940000154965.A.a	ENSGT00940000162611.a.a.b.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000004874.a.a.ub #19	ENSGT00940000157525.b.d #20	ENSGT00950000183082.b.b.a.a.d.b.b ##21	ENSGT00950000183082.b.b.a.a.d.b.a.b ##21	ENSGT00940000157556.a.b.f #22	ENSGT00940000165452.a.h	ENSGT00940000157049.c.b.b #23	ENSGT00530000064017.a.f	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00390000010434.b.d.b #8	ENSGT00510000049375.g #10	ENSGT00940000163723.A.f.a	ENSGT00940000165757.c.b.b	ENSGT00940000155293.a.a.i	ENSGT00990000204854.d	ENSGT00940000165701.g	ENSGT00950000182836.b.b.b.b.l	ENSGT00940000157846.c.c	ENSGT00390000012017	ENSGT00390000011433.s.a.f
Salmo	ANCESTRAL SPECIES	38	ENSGT00940000155064.n	ENSGT00390000009790.d	ENSGT00940000157134.h.a	ENSGT00940000153408.A.`b	ENSGT00970000193390.c.a.b.a.a.a	ENSGT00940000157322.b.a.e.b	ENSGT00940000154965.A.a	ENSGT00940000162611.a.a.b.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000004874.a.a.ub #19	ENSGT00940000157525.b.d #20	ENSGT00950000183082.b.b.a.a.d.b.b ##21	ENSGT00950000183082.b.b.a.a.d.b.a.b ##21	ENSGT00940000157556.a.b.f #22	ENSGT00940000165452.a.h	ENSGT00940000157049.c.b.a.a #23	ENSGT00530000064017.a.f	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00390000010434.b.d.b #8	ENSGT00510000049375.g #10	ENSGT00940000163723.A.f.a	ENSGT00940000165757.c.b.b	ENSGT00940000155293.a.a.i	ENSGT00990000204854.d	ENSGT00940000165701.g	ENSGT00950000182836.b.b.b.b.l	ENSGT00940000157846.c.c	ENSGT00390000012017	ENSGT00390000011433.s.a.f
Atlantic salmon	MODERN SPECIES	20	rab23 (ENSSSAG00000083099)	PRIM2 (ENSSSAG00000077752)	KHDRBS2 (ENSSSAG00000077738)	ENSSSAG00000001603	ENSSSAG00000075660	ENSSSAG00000121541	ENSSSAG00000088434	morn4 (ENSSSAG00000075578) #7	ENSSSAG00000075577	st3gal7 (ENSSSAG00000075576)	ENSSSAG00000115096	HPSE2 (ENSSSAG00000001058) #19	CNNM1 (ENSSSAG00000001038) #20	got1 (ENSSSAG00000117439) ##21	ENSSSAG00000090388	nkx2.3 (ENSSSAG00000091368) #22	nkx3.3 (ENSSSAG00000111355)	ENSSSAG00000090773	slc25a28 (ENSSSAG00000075557) #23	ENSSSAG00000105715	ENSSSAG00000122151 #8	ENSSSAG00000101173	ENSSSAG00000075553	ENSSSAG00000083955	ENSSSAG00000088446 #10	ENSSSAG00000099101	ENSSSAG00000110104	kcnk1b (ENSSSAG00000075442)	ENSSSAG00000075436	ENSSSAG00000072418	agpat4 (ENSSSAG00000072273)
River trout	MODERN SPECIES	1	bag2 (ENSSTUG00000034015)	rab23 (ENSSTUG00000033997)	khdrbs2 (ENSSTUG00000033974)	ENSSTUG00000033953	XPO5 (ENSSTUG00000033420)	ENSSTUG00000033390	slit1a (ENSSTUG00000030646)	ENSSTUG00000030548	ENSSTUG00000030543	morn4 (ENSSTUG00000030530) #7	ENSSTUG00000030526	st3gal7 (ENSSTUG00000019350)	HPSE2 (ENSSTUG00000019224) #19	CNNM1 (ENSSTUG00000019181) #20	got1 (ENSSTUG00000019061) ##21	nkx2.3 (ENSSTUG00000019037) #22	nkx3.3 (ENSSTUG00000019026)	slc25a28 (ENSSTUG00000018986) #23	ENSSTUG00000018905	ENSSTUG00000018882	pi4k2a (ENSSTUG00000018858) #8	marveld1 (ENSSTUG00000018853) #10	ENSSTUG00000018828	ENSSTUG00000018821	zgc:171482 (ENSSTUG00000018804)	kcnk1b (ENSSTUG00000018792)	ENSSTUG00000018776	ENSSTUG00000018149	agpat4 (ENSSTUG00000018116)	ENSSTUG00000018109	THBS2 (ENSSTUG00000016312)
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT00940000155064.n	ENSGT00390000009790.d	ENSGT00940000157134.h.a	ENSGT00940000153408.A.`b	ENSGT00970000193390.c.a.b.a.a.a.a.a	ENSGT00970000193390.c.a.b.a.a.a.b	ENSGT00940000157322.b.a.e.b	ENSGT00940000154965.A.a	ENSGT00940000162611.a.a.b.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000004874.a.a.ub #19	ENSGT00940000157525.b.d #20	ENSGT00950000183082.b.b.a.a.d.b.b ##21	ENSGT00940000157556.a.b.f #22	ENSGT00940000165452.a.h	ENSGT00940000157049.c.b.b #23	ENSGT00530000064017.a.f	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00390000010434.b.d.b #8	ENSGT00510000049375.g #10	ENSGT01060000253683	ENSGT00940000165757.c.a.b	ENSGT00940000155293.a.a.i	ENSGT00940000165701.g	ENSGT00950000182836.b.b.b.b.l	ENSGT00940000157846.c.c	ENSGT00390000012017	ENSGT00390000011433.s.a.f	ENSGT00530000063603.B.h
Oncorhynchus_a	ANCESTRAL SPECIES	18	ENSGT00940000155064.n	ENSGT00390000009790.d	ENSGT00940000157134.h.a	ENSGT00940000153408.A.`b	ENSGT00970000193390.c.a.b.a.a.a.a.a	ENSGT00970000193390.c.a.b.a.a.a.b	ENSGT00940000157322.b.a.e.b	ENSGT00940000154965.A.a	ENSGT00940000162611.a.a.b.b	ENSGT00730000111173.g #7	ENSGT00940000153956.b	ENSGT00940000165889	ENSGT00390000004874.a.a.ub #19	ENSGT00940000157525.b.d #20	ENSGT00950000183082.b.b.a.a.d.b.b ##21	ENSGT00940000157556.a.b.f #22	ENSGT00940000165452.a.h	ENSGT00940000157049.c.b.b #23	ENSGT00530000064017.a.f	ENSGT00950000182926.b.d.a.a.b.h	ENSGT00390000010434.b.d.b #8	ENSGT00510000049375.g #10	ENSGT01060000253683	ENSGT00940000165757.c.a.b	ENSGT00940000155293.a.a.i	ENSGT00940000165701.g	ENSGT00950000182836.b.b.b.b.l	ENSGT00940000157846.c.c	ENSGT00390000012017	ENSGT00390000011433.s.a.f	ENSGT00530000063603.B.h
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	3005							slit1a (ENSOTSG00005039978)	ENSOTSG00005039966	ENSOTSG00005039967	morn4 (ENSOTSG00005039963) #7	st3gal7 (ENSOTSG00005039961)	ENSOTSG00005039960	HPSE2 (ENSOTSG00005039955) #19	CNNM1 (ENSOTSG00005039953) #20	got1 (ENSOTSG00005039951) ##21	nkx2.3 (ENSOTSG00005039950) #22	nkx3.3 (ENSOTSG00005039949)	slc25a28 (ENSOTSG00005039947) #23	ENSOTSG00005039943	ENSOTSG00005039941	pi4k2a (ENSOTSG00005039829) #8	ENSOTSG00005039818	ENSOTSG00005039814	ENSOTSG00005039803	marveld1 (ENSOTSG00005039801) #10	pi4k2a (ENSOTSG00005039727) #8	ENSOTSG00005039707	ENSOTSG00005039705	slc25a28 (ENSOTSG00005039703) #23
Chinook salmon	MODERN SPECIES	17	DST (ENSOTSG00005002828)	ENSOTSG00005002625	bag2 (ENSOTSG00005002622)	rab23 (ENSOTSG00005002619)	cpn1 (ENSOTSG00005034612) #29	ENSOTSG00005034611	XPO5 (ENSOTSG00005034518)	slit1a (ENSOTSG00005034436)	ENSOTSG00005034432	morn4 (ENSOTSG00005034430) #7	st3gal7 (ENSOTSG00005034429)	ENSOTSG00005034426	HPSE2 (ENSOTSG00005034422) #19	CNNM1 (ENSOTSG00005034416) #20	got1 (ENSOTSG00005034411) ##21	nkx2.3 (ENSOTSG00005034407) #22	nkx3.3 (ENSOTSG00005034405)	kcnk1b (ENSOTSG00005034403)	ENSOTSG00005029107	agpat4 (ENSOTSG00005029064)	THBS2 (ENSOTSG00005027465)	ENSOTSG00005027451	ENSOTSG00005027450	PSME4 (ENSOTSG00005026777)	erlec1 (ENSOTSG00005025375)	ENSOTSG00005025372	ENSOTSG00005025370	NRXN1 (ENSOTSG00005023915)	LHCGR (ENSOTSG00005023894)	STON1 (ENSOTSG00005023892)	ppp1r21 (ENSOTSG00005021526)
Coho salmon	MODERN SPECIES	17	ENSOKIG00005023848	ENSOKIG00005023811	ENSOKIG00005023791	XPO5 (ENSOKIG00005023684)	ENSOKIG00005023662	SLIT1 (ENSOKIG00005018648)	ENSOKIG00005018414	ENSOKIG00005018396	morn4 (ENSOKIG00005018386) #7	ENSOKIG00005018379	st3gal7 (ENSOKIG00005018367)	ENSOKIG00005018361	HPSE2 (ENSOKIG00005018314) #19	CNNM1 (ENSOKIG00005018273) #20	got1 (ENSOKIG00005018218) ##21	nkx2.3 (ENSOKIG00005018206) #22	nkx3.3 (ENSOKIG00005018199)	slc25a28 (ENSOKIG00005018176) #23	ENSOKIG00005018168	ENSOKIG00005018154	ENSOKIG00005018101 #8	MARVELD1 (ENSOKIG00005018097) #10	ENSOKIG00005018091	ENSOKIG00005018083	kcnk1b (ENSOKIG00005018080)	ENSOKIG00005018075	ENSOKIG00005012935	agpat4 (ENSOKIG00005012600)	THBS2 (ENSOKIG00005012323)	ENSOKIG00005012263	ENSOKIG00005012249
Rainbow trout	MODERN SPECIES	12	ENSOMYG00000057240	ENSOMYG00000043343	ENSOMYG00000056488	ENSOMYG00000054489	ENSOMYG00000043182	ENSOMYG00000043157	ENSOMYG00000049940	ENSOMYG00000043163	ENSOMYG00000043152 #7	st3gal7 (ENSOMYG00000043139)	ENSOMYG00000050654	HPSE2 (ENSOMYG00000043124) #19	CNNM1 (ENSOMYG00000043115) #20	ENSOMYG00000043114	got1 (ENSOMYG00000043106) ##21	nkx2.3 (ENSOMYG00000043096) #22	nkx3.3 (ENSOMYG00000043095)	slc25a28 (ENSOMYG00000043085) #23	ENSOMYG00000055904	ENSOMYG00000043076	ENSOMYG00000043052 #8	ENSOMYG00000043047 #10	ENSOMYG00000071543	ENSOMYG00000048427	kcnk1b (ENSOMYG00000043033)	ENSOMYG00000038592	agpat4 (ENSOMYG00000037674)	ENSOMYG00000037486	ENSOMYG00000037387	ENSOMYG00000036954	ERLEC1 (ENSOMYG00000036803)
Northern pike	MODERN SPECIES	5	ENSELUG00000031724	ENSELUG00000020757	bag2 (ENSELUG00000031955)	rab23 (ENSELUG00000020788)	prim2 (ENSELUG00000020852)	khdrbs2 (ENSELUG00000020898)	XPO5 (ENSELUG00000021008)	ARHGAP19 (ENSELUG00000021067)	slit1a (ENSELUG00000021342)	ENSELUG00000021368	morn4 (ENSELUG00000021411) #7	hps1 (ENSELUG00000021455) #18	HPSE2 (ENSELUG00000021468) #19	CNNM1 (ENSELUG00000021501) #20	got1 (ENSELUG00000021545) ##21	nkx2.3 (ENSELUG00000021555) #22	nkx3.3 (ENSELUG00000021562)	slc25a28 (ENSELUG00000021579) #23	ENSELUG00000021674	ENSELUG00000021705	pi4k2a (ENSELUG00000021744) #8	ENSELUG00000021760	marveld1 (ENSELUG00000021766) #10	ENSELUG00000021778	ENSELUG00000030584	zgc:171482 (ENSELUG00000021817)	sfrp5 (ENSELUG00000021837) #12	golga7ba (ENSELUG00000021864) #13	CRTAC1 (ENSELUG00000021908) #14	LOXL4 (ENSELUG00000021966) #16	zgc:123010 (ENSELUG00000022008)
Osteoglossocephalai	ANCESTRAL SPECIES	64	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00940000155864.b.c.b	ENSGT00730000111022	ENSGT00410000025802	ENSGT00940000154704.c.c	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00720000108860	ENSGT00940000160296	ENSGT00940000155860.a	ENSGT00940000160547	ENSGT00940000154314.b	ENSGT00940000155782	ENSGT00390000009948.d	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b	ENSGT00940000160915
Osteoglossiformes	ANCESTRAL SPECIES	73	ENSGT01060000252224	ENSGT00940000157176.a	ENSGT00860000136310	ENSGT00940000157931	ENSGT00940000165180	ENSGT00940000155864.b.c.b.a	ENSGT00730000111022	ENSGT00940000154704.c.c	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355.i	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00720000108860	ENSGT00940000160296.i	ENSGT00940000155860.a	ENSGT00940000160547	ENSGT00940000154314.b	ENSGT00940000155782.e	ENSGT00940000164226.a.a	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b.f	ENSGT00940000160915	ENSGT00940000157038.b	ENSGT00530000064712
P. kingsleyae	MODERN SPECIES	33															stc1 (ENSPKIG00000024706)	ENSPKIG00000024712 #22	nkx3-1 (ENSPKIG00000024717)	slc25a37 (ENSPKIG00000024722)	entpd4 (ENSPKIG00000024732) ##24	chmp7 (ENSPKIG00000024747)	lgi3 (ENSPKIG00000024758)	fgfr1a (ENSPKIG00000024774)	ankrd39 (ENSPKIG00000024789)	kctd9a (ENSPKIG00000024794)	actr1b (ENSPKIG00000024805)	npy8br (ENSPKIG00000024821)	arid5a (ENSPKIG00000024825)	dbnlb (ENSPKIG00000024839)	ube2d4 (ENSPKIG00000024864)	TCF7L1 (ENSPKIG00000024880)	ENSPKIG00000024894
Asian bonytongue	MODERN SPECIES	3	ANTXR1 (ENSSFOG00015011296)	ENSSFOG00015011361	bmp1a (ENSSFOG00015011381)	DISP3 (ENSSFOG00015011458)	ENSSFOG00015011681	zgc:100918 (ENSSFOG00015011771)	zgc:56596 (ENSSFOG00015011795)	ENSSFOG00015011819	ENSSFOG00015011932	BIN3 (ENSSFOG00015012059)	egr3 (ENSSFOG00015012079)	PEBP4 (ENSSFOG00015030635)	RHOBTB2 (ENSSFOG00015012104)	ido1 (ENSSFOG00015012133)	stc1 (ENSSFOG00015032109)	ENSSFOG00015012166 #22	nkx3-1 (ENSSFOG00015012180)	slc25a37 (ENSSFOG00015030477)	entpd4 (ENSSFOG00015012195) ##24	chmp7 (ENSSFOG00015012230)	lgi3 (ENSSFOG00015012246)	fgfr1b (ENSSFOG00015012261)	ankrd39 (ENSSFOG00015024327)	kctd9a (ENSSFOG00015012305)	actr1b (ENSSFOG00015012328)	arid5a (ENSSFOG00015012374)	dbnlb (ENSSFOG00015012403)	ube2d4 (ENSSFOG00015012439)	TCF7L1 (ENSSFOG00015012463)	ENSSFOG00015012518	stambpa (ENSSFOG00015012531)
Clupeocephala	ANCESTRAL SPECIES	67	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00940000155864.b.c.b	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00720000108860	ENSGT00940000160296	ENSGT00940000155860.a	ENSGT00940000160547	ENSGT00940000154314.b	ENSGT00940000164226.a.a	ENSGT00940000159598	ENSGT00940000164254.a.a	ENSGT00390000008529	ENSGT00550000075141	ENSGT00940000160597	ENSGT00740000116948
Euteleosteomorpha	ANCESTRAL SPECIES	14	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00940000155864.b.c.b	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00720000108860	ENSGT00940000160296	ENSGT00940000155860.a	ENSGT00940000160547	ENSGT00940000164226.a.a	ENSGT00940000159598	ENSGT00940000164254.a.a	ENSGT00390000008529	ENSGT00940000156208.j	ENSGT00940000157734	ENSGT00730000113357	ENSGT00940000165076.a
Acanthomorphata	ANCESTRAL SPECIES	27	ENSGT00940000156522.c.a	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00720000108860	ENSGT00940000160296	ENSGT00940000155860.a	ENSGT00940000160547	ENSGT00940000154314.b	ENSGT00760000119772	ENSGT00940000164226.a.a	ENSGT00940000159598	ENSGT00940000164254.a.a	ENSGT00390000008529	ENSGT00940000156208.j	ENSGT00940000157734
Euacanthomorphacea	ANCESTRAL SPECIES	22	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00720000108860	ENSGT00940000160296	ENSGT00940000155860.a	ENSGT00940000160547	ENSGT00940000154314.b	ENSGT00760000119772	ENSGT00940000164226.a.a	ENSGT00940000159598	ENSGT00940000164254.a.a	ENSGT00390000008529	ENSGT00940000156208.j	ENSGT00940000157734
Pinecone sodierfish	MODERN SPECIES	23	bmp1a (ENSMMDG00005024639)	ENSMMDG00005024638	ENSMMDG00005024633	zgc:56596 (ENSMMDG00005024632)	ENSMMDG00005024631	ENSMMDG00005024630	ENSMMDG00005024143	BIN3 (ENSMMDG00005024019)	egr3 (ENSMMDG00005024017)	PEBP4 (ENSMMDG00005024014)	RHOBTB2 (ENSMMDG00005024010)	ENSMMDG00005024008	ENSMMDG00005024005	ido1 (ENSMMDG00005023997)	stc1 (ENSMMDG00005023990)	ENSMMDG00005023989 #22	nkx3-1 (ENSMMDG00005023988)	slc25a37 (ENSMMDG00005023986)	entpd4 (ENSMMDG00005023911) ##24	chmp7 (ENSMMDG00005023896)	lgi3 (ENSMMDG00005023893)	fgfr1a (ENSMMDG00005016898)	ankrd39 (ENSMMDG00005016576)	kctd9a (ENSMMDG00005016566)	ENSMMDG00005016396	npy8br (ENSMMDG00005016390)	KLHL22 (ENSMMDG00005016385)	tbx16 (ENSMMDG00005016380)	CABIN1 (ENSMMDG00005011175)	NEFL (ENSMMDG00005011092)	dock5 (ENSMMDG00005010206)
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Tiger tail seahorse	MODERN SPECIES	518	stx10 (ENSHCOG00000009302)	wdr83os (ENSHCOG00000009291)	wdr83 (ENSHCOG00000009279)	ENSHCOG00000009260	yju2b (ENSHCOG00000009176)	c3b.2 (ENSHCOG00000009152)	ENSHCOG00000009071	ARHGAP19 (ENSHCOG00000009054)	slit1b (ENSHCOG00000009025)	ENSHCOG00000008968	ENSHCOG00000008944	MORN4 (ENSHCOG00000008931) #7	hoga1 (ENSHCOG00000008912)	CNNM1 (ENSHCOG00000008889) #20	GOT1 (ENSHCOG00000008823) ##21	NKX2-3 (ENSHCOG00000008804) #22	slc25a28 (ENSHCOG00000008780) #23	ENTPD7 (ENSHCOG00000008762) #24	ENSHCOG00000008711	atpv0e2 (ENSHCOG00000008699)	parn (ENSHCOG00000008683)	REXO5 (ENSHCOG00000008648)	ENSHCOG00000008639	thumpd1 (ENSHCOG00000008618)	AXIN1 (ENSHCOG00000008602)	ENSHCOG00000008567	ENSHCOG00000008556	ufl1 (ENSHCOG00000008493)	ENSHCOG00000008485	ENSHCOG00000008470	ENSHCOG00000008463
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Cichlidae	ANCESTRAL SPECIES	6	ENSGT00940000156522.c.a	ENSGT01060000250581	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Pseudocrenilabrinae	ANCESTRAL SPECIES	11	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000165452.b	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a
Haplochromini	ANCESTRAL SPECIES	4	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000165452.b	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Burton s mouthbrooder	MODERN SPECIES	320	ANTXR1 (ENSHBUG00000012787)	ENSHBUG00000012818	kansl3 (ENSHBUG00000012854)	bmp1a (ENSHBUG00000012971)	DISP3 (ENSHBUG00000012982)	ENSHBUG00000013068	zgc:56596 (ENSHBUG00000013073)	ENSHBUG00000013087	ENSHBUG00000013103	BIN3 (ENSHBUG00000013120)	egr3 (ENSHBUG00000000382)	PEBP4 (ENSHBUG00000013138)	RHOBTB2 (ENSHBUG00000013170)	ido1 (ENSHBUG00000013205)	stc1 (ENSHBUG00000013226)	NKX2-3 (ENSHBUG00000013297) #22	ENSHBUG00000013310	slc25a37 (ENSHBUG00000013323)	entpd4 (ENSHBUG00000013358) ##24	si:ch211-214j8.12 (ENSHBUG00000013365)	gda (ENSHBUG00000013422)	zgc:101016 (ENSHBUG00000013438)	abhd17b (ENSHBUG00000001050)	cemip2 (ENSHBUG00000013468)	TRPM3 (ENSHBUG00000013781)	klf9 (ENSHBUG00000013800)	fam219ab (ENSHBUG00000013841)	ENSHBUG00000013847	ela3l (ENSHBUG00000013883)	bco2l (ENSHBUG00000013927)	ENSHBUG00000013943
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000165452.b	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
P. nyererei	MODERN SPECIES	328	ANTXR1 (ENSPNYG00000015395)	ENSPNYG00000015378	kansl3 (ENSPNYG00000015342)	bmp1a (ENSPNYG00000015293)	DISP3 (ENSPNYG00000015205)	ENSPNYG00000015162	zgc:56596 (ENSPNYG00000015142)	ENSPNYG00000014960	ENSPNYG00000014876	BIN3 (ENSPNYG00000014849)	egr3 (ENSPNYG00000014833)	PEBP4 (ENSPNYG00000014815)	RHOBTB2 (ENSPNYG00000014797)	ido1 (ENSPNYG00000014742)	stc1 (ENSPNYG00000014714)	NKX2-3 (ENSPNYG00000014704) #22	ENSPNYG00000014688	slc25a37 (ENSPNYG00000014669)	entpd4 (ENSPNYG00000014628) ##24	si:ch211-214j8.12 (ENSPNYG00000014613)	gda (ENSPNYG00000014530)	zgc:101016 (ENSPNYG00000014511)	abhd17b (ENSPNYG00000014502)	cemip2 (ENSPNYG00000014467)	TRPM3 (ENSPNYG00000014356)	klf9 (ENSPNYG00000014337)	fam219ab (ENSPNYG00000014306)	ENSPNYG00000014289	ela3l (ENSPNYG00000014269)	bco2l (ENSPNYG00000014240)	ENSPNYG00000014221
Haplochromini_B	ANCESTRAL SPECIES	2	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000165452.b	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Eastern happy	MODERN SPECIES	3	ANTXR1 (ENSACLG00000009087)	ENSACLG00000008445	kansl3 (ENSACLG00000008354)	bmp1a (ENSACLG00000008321)	DISP3 (ENSACLG00000008305)	ENSACLG00000008271	zgc:56596 (ENSACLG00000008264)	ENSACLG00000008246	ENSACLG00000008225	BIN3 (ENSACLG00000008213)	egr3 (ENSACLG00000008207)	ENSACLG00000008199	RHOBTB2 (ENSACLG00000008182)	ido1 (ENSACLG00000008162)	stc1 (ENSACLG00000007812)	ENSACLG00000007794 #22	ENSACLG00000007791	slc25a37 (ENSACLG00000007775)	entpd4 (ENSACLG00000007758) ##24	si:ch211-214j8.12 (ENSACLG00000007751)	gda (ENSACLG00000007710)	zgc:101016 (ENSACLG00000007694)	abhd17b (ENSACLG00000007682)	cemip2 (ENSACLG00000007664)	TRPM3 (ENSACLG00000007466)	klf9 (ENSACLG00000007441)	fam219ab (ENSACLG00000007427)	ENSACLG00000007421	ela3l (ENSACLG00000007412)	bco2l (ENSACLG00000007389)	ENSACLG00000007375
Zebra mbuna	MODERN SPECIES	1094	ANTXR1 (ENSMZEG00005012321)	ENSMZEG00005012349	kansl3 (ENSMZEG00005012365)	bmp1a (ENSMZEG00005012403)	DISP3 (ENSMZEG00005012438)	ENSMZEG00005012464	zgc:56596 (ENSMZEG00005012521)	ENSMZEG00005012568	ENSMZEG00005012663	BIN3 (ENSMZEG00005012691)	egr3 (ENSMZEG00005012707)	PEBP4 (ENSMZEG00005012728)	RHOBTB2 (ENSMZEG00005012770)	ido1 (ENSMZEG00005012801)	stc1 (ENSMZEG00005012817)	ENSMZEG00005012835 #22	ENSMZEG00005012847	slc25a37 (ENSMZEG00005012860)	entpd4 (ENSMZEG00005012904) ##24	si:ch211-214j8.12 (ENSMZEG00005012917)	gda (ENSMZEG00005012936)	slc25a37 (ENSMZEG00005012981)	entpd4 (ENSMZEG00005013293) ##24	si:ch211-214j8.12 (ENSMZEG00005013313)	gda (ENSMZEG00005013451)	zgc:101016 (ENSMZEG00005013460)	abhd17b (ENSMZEG00005013467)	cemip2 (ENSMZEG00005013475)	TRPM3 (ENSMZEG00005013509)	klf9 (ENSMZEG00005013538)	fam219ab (ENSMZEG00005013549)
Nile tilapia	MODERN SPECIES	3	ENSONIG00000039909	kansl3 (ENSONIG00000011688)	bmp1a (ENSONIG00000011697)	DISP3 (ENSONIG00000011711)	ENSONIG00000011714	zgc:56596 (ENSONIG00000030145)	ENSONIG00000034956	ENSONIG00000011720	ENSONIG00000011724	BIN3 (ENSONIG00000011748)	egr3 (ENSONIG00000011752)	PEBP4 (ENSONIG00000028826)	RHOBTB2 (ENSONIG00000011754)	ido1 (ENSONIG00000011757)	stc1 (ENSONIG00000011759)	ENSONIG00000011761 #22	nkx3-1 (ENSONIG00000011762)	slc25a37 (ENSONIG00000011763)	entpd4 (ENSONIG00000011764) ##24	si:ch211-214j8.12 (ENSONIG00000022757)	gda (ENSONIG00000011770)	zgc:101016 (ENSONIG00000011777)	abhd17b (ENSONIG00000011780)	ENSONIG00000032578	cemip2 (ENSONIG00000011781)	TRPM3 (ENSONIG00000011786)	klf9 (ENSONIG00000036140)	fam219ab (ENSONIG00000011791)	ENSONIG00000028687	ela3l (ENSONIG00000011792)	bco2l (ENSONIG00000011793)
Midas cichlid	MODERN SPECIES	1713																ENSACIG00000008506 #22
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A	ENSGT00940000154078.a.b
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT01100000265139	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Poecilia	ANCESTRAL SPECIES	3	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT01100000265139	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
NAME_6	ANCESTRAL SPECIES	9	ENSGT00940000157727.y	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT01100000265139	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Amazon molly	MODERN SPECIES	257	gfpt1 (ENSPFOG00000012102)	ENSPFOG00000011769	kansl3 (ENSPFOG00000011497)	bmp1a (ENSPFOG00000011094)	DISP3 (ENSPFOG00000010718)	ENSPFOG00000010602	ENSPFOG00000010373	ENSPFOG00000010054	BIN3 (ENSPFOG00000009987)	egr3 (ENSPFOG00000009991)	egr3 (ENSPFOG00000009968)	PEBP4 (ENSPFOG00000024778)	RHOBTB2 (ENSPFOG00000009868)	ido1 (ENSPFOG00000009720)	stc1 (ENSPFOG00000009684)	ENSPFOG00000009667 #22	nkx3-1 (ENSPFOG00000009654)	slc25a37 (ENSPFOG00000009583)	entpd4 (ENSPFOG00000009459) ##24	si:ch211-214j8.12 (ENSPFOG00000023083)	gda (ENSPFOG00000009237)	zgc:101016 (ENSPFOG00000009230)	abhd17b (ENSPFOG00000021892)	cemip2 (ENSPFOG00000008955)	TRPM3 (ENSPFOG00000008426)	klf9 (ENSPFOG00000008405)	fam219ab (ENSPFOG00000008346)	ela3l (ENSPFOG00000008218)	bco2l (ENSPFOG00000008023)	ENSPFOG00000007973	LZTS1 (ENSPFOG00000007930)
Guppy	MODERN SPECIES	461	gfpt1 (ENSPREG00000007025)	ANTXR1 (ENSPREG00000006996)	ENSPREG00000006975	kansl3 (ENSPREG00000006913)	bmp1a (ENSPREG00000006837)	DISP3 (ENSPREG00000006732)	ENSPREG00000006630	zgc:56596 (ENSPREG00000006597)	ENSPREG00000006567	ENSPREG00000006536	BIN3 (ENSPREG00000006474)	egr3 (ENSPREG00000006460)	RHOBTB2 (ENSPREG00000006438)	ido1 (ENSPREG00000006410)	stc1 (ENSPREG00000006405)	ENSPREG00000006396 #22	nkx3-1 (ENSPREG00000006388)	slc25a37 (ENSPREG00000006380)	entpd4 (ENSPREG00000006350) ##24	si:ch211-214j8.12 (ENSPREG00000006338)	gda (ENSPREG00000006312)	zgc:101016 (ENSPREG00000006292)	ABHD17B (ENSPREG00000006281)	cemip2 (ENSPREG00000006261)	TRPM3 (ENSPREG00000006062)	klf9 (ENSPREG00000006001)	fam219aa (ENSPREG00000005978)	ENSPREG00000005959	ela3l (ENSPREG00000005927)	BCO2 (ENSPREG00000005912)	ENSPREG00000005898
NAME_4	ANCESTRAL SPECIES	13	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A	ENSGT00940000154078.a.b
Mummichog	MODERN SPECIES	2203	ENSFHEG00000019598	kansl3 (ENSFHEG00000019587)	bmp1a (ENSFHEG00000019550)	DISP3 (ENSFHEG00000019452)	ENSFHEG00000019298	zgc:56596 (ENSFHEG00000019157)	ENSFHEG00000019142	ENSFHEG00000019135	ENSFHEG00000019103	BIN3 (ENSFHEG00000019091)	egr3 (ENSFHEG00000019079)	PEBP4 (ENSFHEG00000019073)	RHOBTB2 (ENSFHEG00000019065)	ido1 (ENSFHEG00000019040)	stc1 (ENSFHEG00000019030)	NKX2-3 (ENSFHEG00000019022) #22	nkx3-1 (ENSFHEG00000019011)	DNAH8 (ENSFHEG00000018987)	ENSFHEG00000018823	slc25a37 (ENSFHEG00000018791)	entpd4 (ENSFHEG00000018782) ##24	si:ch211-214j8.12 (ENSFHEG00000018754)	gda (ENSFHEG00000018745)	zgc:101016 (ENSFHEG00000018728)	abhd17b (ENSFHEG00000018717)	cemip2 (ENSFHEG00000018694)	TRPM3 (ENSFHEG00000018676)	klf9 (ENSFHEG00000018590)	ENSFHEG00000018582	ela3l (ENSFHEG00000018570)	bco2l (ENSFHEG00000018562)
Sheepshead minnow	MODERN SPECIES	562	ANTXR1 (ENSCVAG00000010816)	ENSCVAG00000010800	ENSCVAG00000010773	kansl3 (ENSCVAG00000010759)	bmp1a (ENSCVAG00000010599)	DISP3 (ENSCVAG00000010541)	ENSCVAG00000010346	zgc:56596 (ENSCVAG00000010273)	ENSCVAG00000010259	ENSCVAG00000010108	BIN3 (ENSCVAG00000010095)	ENSCVAG00000010089	RHOBTB2 (ENSCVAG00000010082)	ido1 (ENSCVAG00000010050)	stc1 (ENSCVAG00000010042)	ENSCVAG00000010036 #22	nkx3-1 (ENSCVAG00000010028)	slc25a37 (ENSCVAG00000010023)	entpd4 (ENSCVAG00000010003) ##24	si:ch211-214j8.12 (ENSCVAG00000009977)	gda (ENSCVAG00000009968)
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	28	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Large yellow croaker	MODERN SPECIES	2	ENSLCRG00005012789	ENSLCRG00005012786	kansl3 (ENSLCRG00005012776)	bmp1a (ENSLCRG00005006457)	DISP3 (ENSLCRG00005006410)	ENSLCRG00005006402	zgc:56596 (ENSLCRG00005006398)	ENSLCRG00005006396	ENSLCRG00005005831	BIN3 (ENSLCRG00005005819)	egr3 (ENSLCRG00005005818)	PEBP4 (ENSLCRG00005005815)	RHOBTB2 (ENSLCRG00005005759)	ido1 (ENSLCRG00005005755)	stc1 (ENSLCRG00005005752)	ENSLCRG00005005751 #22	nkx3-1 (ENSLCRG00005005750)	slc25a37 (ENSLCRG00005005749)	entpd4 (ENSLCRG00005005747) ##24	entpd4 (ENSLCRG00005004972) ##24	tmem127 (ENSLCRG00005004969)	gatd3l (ENSLCRG00005004966)	ENSLCRG00005004938	tmem230b (ENSLCRG00005004930)	adra1aa (ENSLCRG00005004928)	DPYSL2 (ENSLCRG00005003922)	bnip3la (ENSLCRG00005003915)	ENSLCRG00005003883	vps33a (ENSLCRG00005003844)	RPH3A (ENSLCRG00005003842)	ENSLCRG00005003840
European seabass	MODERN SPECIES	13	ENSDLAG00005020812	ENSDLAG00005020809	ENSDLAG00005020804	kansl3 (ENSDLAG00005020631)	bmp1a (ENSDLAG00005019871)	ENSDLAG00005019667	ENSDLAG00005019508	ENSDLAG00005019412	ENSDLAG00005017881	ENSDLAG00005031913	egr3 (ENSDLAG00005027258)	ENSDLAG00005033523	ENSDLAG00005017798	ENSDLAG00005017469	ido1 (ENSDLAG00005017431)	ENSDLAG00005017397 #22	nkx3-1 (ENSDLAG00005017392)	slc25a37 (ENSDLAG00005028130)	stc1 (ENSDLAG00005030618)	entpd4 (ENSDLAG00005016761) ##24	ENSDLAG00005016738	gda (ENSDLAG00005016346)	ABHD17B (ENSDLAG00005030614)	cemip2 (ENSDLAG00005015973)	ENSDLAG00005015948	TRPM3 (ENSDLAG00005008030)	fam219ab (ENSDLAG00005034632)	ela3l (ENSDLAG00005007672)	bco2l (ENSDLAG00005007347)	ENSDLAG00005007293	ENSDLAG00005007274
Perciformes	ANCESTRAL SPECIES	6	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Cottioidei	ANCESTRAL SPECIES	11	ENSGT00940000158488	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A	ENSGT00940000154078.a.b
Stickleback	MODERN SPECIES	12	nfu1 (ENSGACG00000010986)	gfpt1 (ENSGACG00000010939)	ANTXR1 (ENSGACG00000010935)	ENSGACG00000010933	kansl3 (ENSGACG00000010919)	bmp1a (ENSGACG00000010897)	DISP3 (ENSGACG00000010886)	ENSGACG00000010881	zgc:56596 (ENSGACG00000010872)	ENSGACG00000010866	ENSGACG00000010837	BIN3 (ENSGACG00000010828)	egr3 (ENSGACG00000010820)	RHOBTB2 (ENSGACG00000010796)	stc1 (ENSGACG00000010784)	ENSGACG00000010780 #22	nkx3-1 (ENSGACG00000010776)	slc25a37 (ENSGACG00000010765)	entpd4 (ENSGACG00000010756) ##24	si:ch211-214j8.12 (ENSGACG00000010753)	ENSGACG00000010750	gda (ENSGACG00000010716)	zgc:101016 (ENSGACG00000010713)	abhd17b (ENSGACG00000010702)	cemip2 (ENSGACG00000010690)	TRPM3 (ENSGACG00000010674)	klf9 (ENSGACG00000010668)	fam219ab (ENSGACG00000010656)	ela3l (ENSGACG00000010640)	bco2l (ENSGACG00000010607)	ENSGACG00000010604
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Pike perch	MODERN SPECIES	2	ANTXR1 (ENSSLUG00000007786)	ENSSLUG00000007749	kansl3 (ENSSLUG00000006781)	bmp1a (ENSSLUG00000003682)	DISP3 (ENSSLUG00000003396)	ENSSLUG00000003254	zgc:56596 (ENSSLUG00000021055)	ENSSLUG00000021047	ENSSLUG00000018590	BIN3 (ENSSLUG00000018484)	egr3 (ENSSLUG00000018480)	PEBP4 (ENSSLUG00000018477)	RHOBTB2 (ENSSLUG00000018461)	ido1 (ENSSLUG00000018444)	stc1 (ENSSLUG00000018438)	ENSSLUG00000018434 #22	nkx3-1 (ENSSLUG00000018428)	slc25a37 (ENSSLUG00000018426)	entpd4 (ENSSLUG00000017734) ##24	abhd17b (ENSSLUG00000017687)	zgc:101016 (ENSSLUG00000017682)	gda (ENSSLUG00000017671)	si:ch211-214j8.12 (ENSSLUG00000017662)	ENSSLUG00000017657	nkx6.3 (ENSSLUG00000017654)	inpp5l (ENSSLUG00000017650)	GPAT4 (ENSSLUG00000017603)	ENSSLUG00000017577	POLR3D (ENSSLUG00000017570)	PHYHIP (ENSSLUG00000017563)	ppp1r3c2b (ENSSLUG00000017558)
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Zig-zag eel	MODERN SPECIES	23	ENSMAMG00000009653	ENSMAMG00000024607	kansl3 (ENSMAMG00000009712)	bmp1a (ENSMAMG00000009794)	ENSMAMG00000009854	ENSMAMG00000010003	zgc:56596 (ENSMAMG00000010092)	ENSMAMG00000010106	ENSMAMG00000010135	BIN3 (ENSMAMG00000010156)	egr3 (ENSMAMG00000027207)	PEBP4 (ENSMAMG00000010187)	ENSMAMG00000010200	ido1 (ENSMAMG00000010223)	stc1 (ENSMAMG00000010273)	ENSMAMG00000010284 #22	nkx3-1 (ENSMAMG00000010300)	slc25a37 (ENSMAMG00000010310)	entpd4 (ENSMAMG00000010329) ##24	ENSMAMG00000010389	gda (ENSMAMG00000010405)	C9orf85 (ENSMAMG00000025643)	abhd17b (ENSMAMG00000028599)	cemip2 (ENSMAMG00000010473)	ENSMAMG00000025740	TRPM3 (ENSMAMG00000010571)	klf9 (ENSMAMG00000027923)	fam219ab (ENSMAMG00000010627)	bco2l (ENSMAMG00000010672)	ENSMAMG00000010638	ela3l (ENSMAMG00000010642)
Carangaria	ANCESTRAL SPECIES	9	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Carangaria_A	ANCESTRAL SPECIES	6	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Seriola	ANCESTRAL SPECIES	7	ENSGT00940000156522.c.a	ENSGT00940000168891	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00610000087464	ENSGT00390000017130	ENSGT00440000033805	ENSGT00940000157611	ENSGT00940000153636.b	ENSGT00940000157366	ENSGT00940000160905	ENSGT00390000000860.b.a	ENSGT00940000176952	ENSGT01030000234528.B.a.b	ENSGT00950000182913.A.a.a	ENSGT00940000156168.A
Yellowtail amberjack	MODERN SPECIES	2973					DISP3 (ENSSLDG00000000821)	ENSSLDG00000000725	zgc:56596 (ENSSLDG00000000712)	ENSSLDG00000000361	ENSSLDG00000000344	BIN3 (ENSSLDG00000000334)	egr3 (ENSSLDG00000000308)	PEBP4 (ENSSLDG00000000273)	RHOBTB2 (ENSSLDG00000000226)	ido1 (ENSSLDG00000000156)	stc1 (ENSSLDG00000000128)	ENSSLDG00000000079 #22	nkx3-1 (ENSSLDG00000021587)	slc25a37 (ENSSLDG00000021576)	entpd4 (ENSSLDG00000021551) ##24	si:ch211-214j8.12 (ENSSLDG00000021542)	gda (ENSSLDG00000021522)	zgc:101016 (ENSSLDG00000021510)	abhd17b (ENSSLDG00000021498)	cemip2 (ENSSLDG00000021408)	TRPM3 (ENSSLDG00000021333)	klf9 (ENSSLDG00000021315)	fam219ab (ENSSLDG00000021302)	ENSSLDG00000021291	ela3l (ENSSLDG00000021269)	bco2l (ENSSLDG00000021212)	ENSSLDG00000021190
Greater amberjack	MODERN SPECIES	6	ENSSDUG00000020055	ENSSDUG00000020049	kansl3 (ENSSDUG00000019942)	bmp1a (ENSSDUG00000019883)	DISP3 (ENSSDUG00000019844)	ENSSDUG00000019756	zgc:56596 (ENSSDUG00000019732)	ENSSDUG00000019693	ENSSDUG00000019635	BIN3 (ENSSDUG00000019623)	egr3 (ENSSDUG00000019616)	PEBP4 (ENSSDUG00000019596)	RHOBTB2 (ENSSDUG00000019564)	ido1 (ENSSDUG00000019548)	stc1 (ENSSDUG00000019302)	ENSSDUG00000019273 #22	nkx3-1 (ENSSDUG00000019258)	slc25a37 (ENSSDUG00000019250)	entpd4 (ENSSDUG00000019223) ##24	ENSSDUG00000019046	si:ch211-214j8.12 (ENSSDUG00000019017)	gda (ENSSDUG00000018962)	zgc:101016 (ENSSDUG00000018952)	abhd17b (ENSSDUG00000018944)	cemip2 (ENSSDUG00000018845)	TRPM3 (ENSSDUG00000018722)	klf9 (ENSSDUG00000018709)	FAM219A (ENSSDUG00000018692)	ENSSDUG00000018686	ela3l (ENSSDUG00000018672)	bco2l (ENSSDUG00000018642)
Otomorpha	ANCESTRAL SPECIES	240	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00940000155864.b.c.b	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918.g	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00720000108860	ENSGT00940000160296	ENSGT00940000155860.a.e	ENSGT00940000160547	ENSGT00940000154314.b	ENSGT00940000164226.a.a	ENSGT00940000159598	ENSGT00940000164254.a.a	ENSGT00390000008529	ENSGT00550000075141
Clupeiformes	ANCESTRAL SPECIES	85	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00940000155864.b.c.a	ENSGT00730000111022	ENSGT00940000154704.c.d	ENSGT00940000166710	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918.g	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24
Denticle herring	MODERN SPECIES	2	DISP3 (ENSDCDG00000005052)	DISP3 (ENSDCDG00000005039)	ENSDCDG00000004997	ENSDCDG00000004964	zgc:56596 (ENSDCDG00000004961)	ENSDCDG00000004959	ENSDCDG00000004957	ENSDCDG00000003724	BIN3 (ENSDCDG00000003686)	egr3 (ENSDCDG00000003684)	PEBP4 (ENSDCDG00000003681)	RHOBTB2 (ENSDCDG00000003676)	ENSDCDG00000003673	ido1 (ENSDCDG00000003672)	stc1 (ENSDCDG00000003670)	NKX2-3 (ENSDCDG00000003668) #22	nkx3-1 (ENSDCDG00000003666)	slc25a37 (ENSDCDG00000003665)	entpd4 (ENSDCDG00000003510) ##24	chmp7 (ENSDCDG00000003444)	pdcd2 (ENSDCDG00000003435)	trafd1 (ENSDCDG00000003426)	serpina7 (ENSDCDG00000003398)	carnmt1 (ENSDCDG00000003381)	ENSDCDG00000003375	trpm6 (ENSDCDG00000003130)	rorb (ENSDCDG00000017816)	MFSD3 (ENSDCDG00000017788)	anxa1a (ENSDCDG00000016960)	ENSDCDG00000016930	cyp1d1 (ENSDCDG00000016926)
Otophysi	ANCESTRAL SPECIES	199	ENSGT00390000007636	ENSGT00940000157176.a	ENSGT00940000157931	ENSGT00940000165180	ENSGT00940000155864.b.c.b.c	ENSGT00730000111022	ENSGT00940000176487	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918.g	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00720000108860	ENSGT00940000160296	ENSGT00940000155860.a.e	ENSGT00940000160547	ENSGT00940000154314.b	ENSGT00940000164226.a.a	ENSGT00940000159598	ENSGT00940000164254.a.a	ENSGT00390000008529	ENSGT00390000013287	ENSGT00940000158510	ENSGT00950000183083.a.d.b
Characiphysae	ANCESTRAL SPECIES	71	ENSGT00390000007636	ENSGT00940000157176.a.g	ENSGT00940000157931	ENSGT00940000165180	ENSGT00940000155864.b.c.b.c	ENSGT00730000111022	ENSGT00940000165013.b.a.b	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918.g	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00720000108860	ENSGT00940000160296	ENSGT00940000155860.a.e	ENSGT00940000160547	ENSGT00940000181688	ENSGT00940000154314.b	ENSGT00940000164226.a.a	ENSGT00940000159598	ENSGT00940000164254.a.a	ENSGT00390000008529	ENSGT00390000013287	ENSGT00940000158510
Characiphysae_b	ANCESTRAL SPECIES	75	ENSGT00390000007636	ENSGT00940000157176.a.g	ENSGT00940000157931	ENSGT00940000165180	ENSGT00940000155864.b.c.b.c	ENSGT00730000111022	ENSGT00940000165013.b.a.b	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918.g	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00720000108860	ENSGT00940000160296	ENSGT00940000155860.a.e	ENSGT00940000160547	ENSGT00940000154314.b	ENSGT00940000164226.a.a	ENSGT00940000159598	ENSGT00940000164254.a.a	ENSGT00390000008529.d	ENSGT00390000008529.c	ENSGT00390000013287	ENSGT00940000158510
Characoidei	ANCESTRAL SPECIES	72	ENSGT00390000007636	ENSGT00940000157176.a.g	ENSGT00940000157931	ENSGT00940000165180	ENSGT00940000155864.b.c.b.c	ENSGT00730000111022	ENSGT00940000165013.b.a.b	ENSGT00940000154704.c.d	ENSGT00940000166050	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918.g	ENSGT00940000164380.a	ENSGT00390000005989.b.a	ENSGT00940000157556.b #22	ENSGT00940000160930	ENSGT00940000158607	ENSGT01100000263540.B.d ##24	ENSGT00720000108860	ENSGT00940000160296	ENSGT00940000155860.a.e	ENSGT00940000160547	ENSGT00940000154314.b	ENSGT00940000164226.a.a	ENSGT00940000159598	ENSGT00940000164254.a.a	ENSGT00390000008529.d	ENSGT00390000008529.c	ENSGT00390000013287	ENSGT00940000158510
Red-bellied piranha	MODERN SPECIES	44	kansl3 (ENSPNAG00000020794)	bmp1a (ENSPNAG00000020764)	DISP3 (ENSPNAG00000020708)	ENSPNAG00000020681	rab7b (ENSPNAG00000020583)	zgc:56596 (ENSPNAG00000020559)	ENSPNAG00000020531	ENSPNAG00000020512	ENSPNAG00000020465	BIN3 (ENSPNAG00000020376)	egr3 (ENSPNAG00000020365)	PEBP4 (ENSPNAG00000020353)	RHOBTB2 (ENSPNAG00000020346)	ido1 (ENSPNAG00000020312)	stc1 (ENSPNAG00000020267)	ENSPNAG00000020246 #22	nkx3-1 (ENSPNAG00000020233)	slc25a37 (ENSPNAG00000020230)	entpd4 (ENSPNAG00000020216) ##24	chmp7 (ENSPNAG00000005145)	lgi3 (ENSPNAG00000003637)	fgfr1a (ENSPNAG00000020161)	ENSPNAG00000020122	ankrd39 (ENSPNAG00000003624)	ENSPNAG00000020086	kctd9a (ENSPNAG00000020060)	npy8br (ENSPNAG00000006422)	KLHL22 (ENSPNAG00000019987)	tbx16 (ENSPNAG00000019971)	ENSPNAG00000019831	CABIN1 (ENSPNAG00000019814)
Mexicana tetra	MODERN SPECIES	21	ENSAMXG00000007299	rab7b (ENSAMXG00000031957)	zgc:56596 (ENSAMXG00000040562)	ENSAMXG00000007283	ENSAMXG00000030283	ENSAMXG00000007279	BIN3 (ENSAMXG00000007273)	egr3 (ENSAMXG00000036515)	PEBP4 (ENSAMXG00000040276)	ENSAMXG00000034063	RHOBTB2 (ENSAMXG00000007255)	ido1 (ENSAMXG00000039501)	ENSAMXG00000032719	ENSAMXG00000040673	stc1 (ENSAMXG00000042529)	ENSAMXG00000031945 #22	nkx3-1 (ENSAMXG00000031436)	slc25a37 (ENSAMXG00000036375)	ENSAMXG00000036785	entpd4 (ENSAMXG00000030989) ##24	chmp7 (ENSAMXG00000015495)	lgi3 (ENSAMXG00000015522)	fgfr1a (ENSAMXG00000015547)	abt1 (ENSAMXG00000043918)	grm6a (ENSAMXG00000016722)	rgl1 (ENSAMXG00000016687)	colgalt2b (ENSAMXG00000041867)	zgc:92140 (ENSAMXG00000039623)	EDEM3 (ENSAMXG00000041285)	npl (ENSAMXG00000043524)	sec22bb (ENSAMXG00000016628)
Spotted gar	DUPLICATION
Spotted gar	MODERN SPECIES	671	tspan15 (ENSLOCG00000009224)	tacr2 (ENSLOCG00000009218)	hk1 (ENSLOCG00000009187)	hkdc1 (ENSLOCG00000009177)	supv3l1 (ENSLOCG00000009159)	vps26a (ENSLOCG00000009150)	kifbp (ENSLOCG00000009142)	irf1a (ENSLOCG00000009136)	ddx21 (ENSLOCG00000009123)	ENSLOCG00000009110	st3gal7 (ENSLOCG00000009100)	hps1 (ENSLOCG00000009087) #18	HPSE2 (ENSLOCG00000009078) #19	CNNM1 (ENSLOCG00000009070) #20	got1 (ENSLOCG00000009054) #21	nkx2.3 (ENSLOCG00000009050) #22	nkx3.3 (ENSLOCG00000009031)	slc25a28 (ENSLOCG00000009024) #23	ENTPD7 (ENSLOCG00000009002) #24	ENSLOCG00000008992	atpv0e2 (ENSLOCG00000008982)	PYROXD2 (ENSLOCG00000008976) #17	zgc:123010 (ENSLOCG00000008967)	LOXL4 (ENSLOCG00000008953) #16	ENSLOCG00000008944 #15	crtac1a (ENSLOCG00000008921) #14	golga7ba (ENSLOCG00000008912) #13	sfrp5 (ENSLOCG00000008904) #12	zfyve27 (ENSLOCG00000008885) #11	zgc:171482 (ENSLOCG00000008863)	unc5b (ENSLOCG00000008838)
Spotted gar	MODERN SPECIES	647	ENSLOCG00000015078	ENSLOCG00000015075	ENSLOCG00000015074	tcf7l1a (ENSLOCG00000015067)	ube2d4 (ENSLOCG00000015062)	dbnlb (ENSLOCG00000015057)	ENSLOCG00000015055	cox5ba (ENSLOCG00000015054)	npy8br (ENSLOCG00000017980)	marchf5l (ENSLOCG00000015049)	gpat4 (ENSLOCG00000015042)	inpp5l (ENSLOCG00000015035)	nkx6.3 (ENSLOCG00000015030)	ido1 (ENSLOCG00000015024)	stc1l (ENSLOCG00000015019)	ENSLOCG00000015017 #22	nkx3-1 (ENSLOCG00000015015)	slc25a37 (ENSLOCG00000015013)	entpd4 (ENSLOCG00000015008) ##24	chmp7 (ENSLOCG00000015005)	lgi3 (ENSLOCG00000014999)	fgfr1b (ENSLOCG00000014985)	ENSLOCG00000014983	kctd9b (ENSLOCG00000014981)	actr1b (ENSLOCG00000014980)	ANTXR1 (ENSLOCG00000014974)	gfpt1 (ENSLOCG00000014971)	nfu1 (ENSLOCG00000014968)	AAK1 (ENSLOCG00000014966)	anxa4 (ENSLOCG00000014962)	adrb3a (ENSLOCG00000014961)
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	10	ENSECRG00000002079	ARHGAP19 (ENSECRG00000002058)	slit1a (ENSECRG00000002016)	ENSECRG00000001996	ENSECRG00000001987	ENSECRG00000001980	morn4 (ENSECRG00000001966) #7	hoga1 (ENSECRG00000001937)	ANKRD2 (ENSECRG00000001895)	st3gal7 (ENSECRG00000001866)	hps1 (ENSECRG00000001819) #18	HPSE2 (ENSECRG00000001676) #19	CNNM1 (ENSECRG00000001361) #20	got1 (ENSECRG00000001233) #21	ENSECRG00000001228	ENSECRG00000001225 #22	nkx3.3 (ENSECRG00000001214)	ENSECRG00000001202	slc25a28 (ENSECRG00000001191) #23	slc25a28 (ENSECRG00000001160) #23	ENTPD7 (ENSECRG00000001134) #24	ENSECRG00000001109	ATP6V0E2 (ENSECRG00000001091)	pyroxd2 (ENSECRG00000001046)	zgc:123010 (ENSECRG00000001005)	LOXL4 (ENSECRG00000000973) #16	ENSECRG00000000944 #15	crtac1a (ENSECRG00000000875) #14	golga7ba (ENSECRG00000000836) #13	sfrp5 (ENSECRG00000000825) #12	zfyve27 (ENSECRG00000000762) #11
Reedfish	MODERN SPECIES		RIBC2 (ENSECRG00000006979)	dmtn (ENSECRG00000006995)	fgf17 (ENSECRG00000007030)	pbdc1 (ENSECRG00000007046)	xpo7 (ENSECRG00000007066)	kazald3 (ENSECRG00000007104)	DOK2 (ENSECRG00000007126)	ENSECRG00000007131	gfra2a (ENSECRG00000007137)	ENSECRG00000007146	LZTS1 (ENSECRG00000007151)	atp6v1b2 (ENSECRG00000007165)	ENSECRG00000007199	ido1 (ENSECRG00000007213)	stc1l (ENSECRG00000007229)	ENSECRG00000007240 #22	ENSECRG00000007248	slc25a37 (ENSECRG00000007255)	ENSECRG00000007273	bmp1b (ENSECRG00000007319)	npffr1l1 (ENSECRG00000007381)	kansl3 (ENSECRG00000007426)	egr3 (ENSECRG00000007474)	BIN3 (ENSECRG00000007481)	RHOBTB2 (ENSECRG00000007501)	SORBS3 (ENSECRG00000007526)	pdlim2 (ENSECRG00000007544)	CCAR2 (ENSECRG00000007557)	ENSECRG00000007574	neflb (ENSECRG00000007579)	nefma (ENSECRG00000007585)