Theria	ANCESTRAL SPECIES	48	ENSGT00940000161836	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00390000006553 #21	ENSGT00910000144227.s.a #22	ENSGT00960000190059	ENSGT00910000144227.t ##22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00950000182907.b	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000159185	ENSGT00940000164108.b #32
Eutheria	ANCESTRAL SPECIES	27	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a #22	ENSGT00960000190059	ENSGT00910000144227.t ##22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34
Boreoeutheria	DUPLICATION
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00960000190059	ENSGT00910000144227.t ##22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00400000024336	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00440000039287 #37
Primates	ANCESTRAL SPECIES	18	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00400000024336	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00440000039287 #37
Strepsirrhini	ANCESTRAL SPECIES	28	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00400000024336	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00440000039287 #37
Lemuriformes	ANCESTRAL SPECIES	35	ENSGT00940000155012	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00440000039287 #37
Lemuriformes_a	ANCESTRAL SPECIES	25	ENSGT00960000189690	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00440000039287 #37
Greater bamboo lemur	MODERN SPECIES	661									ENSPSMG00000018506 #15	ENSPSMG00000018511 #16	ENSPSMG00000018523 #17	ENSPSMG00000018533 #18	ENSPSMG00000018544 #19	CD320 (ENSPSMG00000018549) #20	NDUFA7 (ENSPSMG00000018554) #21	RPS28 (ENSPSMG00000018559) #22	KANK3 (ENSPSMG00000018580) #23	ANGPTL4 (ENSPSMG00000018593) #24	ENSPSMG00000018620 #25	MARCHF2 (ENSPSMG00000018649) #26	ENSPSMG00000018706 #27	PRAM1 (ENSPSMG00000018722) #28	ZNF414 (ENSPSMG00000018739) #29	MYO1F (ENSPSMG00000018751) #30	ADAMTS10 (ENSPSMG00000018823) #31	ENSPSMG00000018889 #32	ACTL9 (ENSPSMG00000018890) #33	OR2Z1 (ENSPSMG00000018893) #34	ZNF558 (ENSPSMG00000018899) #35	MBD3L1 (ENSPSMG00000018904) #36	ENSPSMG00000018914 #37
Coquerels sifaka	MODERN SPECIES	226	ENSPCOG00000020388	EVI5L (ENSPCOG00000019613)	PRR36 (ENSPCOG00000023012)	LRRC8E (ENSPCOG00000013872)	MAP2K7 (ENSPCOG00000008757)	TGFBR3L (ENSPCOG00000022751)	SNAPC2 (ENSPCOG00000026672)	CTXN1 (ENSPCOG00000007786)	TIMM44 (ENSPCOG00000021628)	ELAVL1 (ENSPCOG00000003300)	ENSPCOG00000019012	FBN3 (ENSPCOG00000019134)	CERS4 (ENSPCOG00000018408)	CD320 (ENSPCOG00000021639) #20	NDUFA7 (ENSPCOG00000022876) #21	RPS28 (ENSPCOG00000018363) #22	KANK3 (ENSPCOG00000025645) #23	ANGPTL4 (ENSPCOG00000016753) #24	RAB11B (ENSPCOG00000028053)	MARCHF2 (ENSPCOG00000018109) #26	HNRNPM (ENSPCOG00000020227) #27	PRAM1 (ENSPCOG00000024323) #28	ZNF414 (ENSPCOG00000026830) #29	MYO1F (ENSPCOG00000015956) #30	ADAMTS10 (ENSPCOG00000026576) #31	ZNF558 (ENSPCOG00000023649) #35
Mouse lemur	MODERN SPECIES	16	ENSMICG00000027611	EVI5L (ENSMICG00000009812)	PRR36 (ENSMICG00000033523)	LRRC8E (ENSMICG00000009651)	MAP2K7 (ENSMICG00000009656)	TGFBR3L (ENSMICG00000036269)	SNAPC2 (ENSMICG00000035695)	CTXN1 (ENSMICG00000043197)	TIMM44 (ENSMICG00000009680)	ELAVL1 (ENSMICG00000009699)	ENSMICG00000041953	ENSMICG00000032746	CERS4 (ENSMICG00000014575)	CD320 (ENSMICG00000046176) #20	NDUFA7 (ENSMICG00000002422) #21	RPS28 (ENSMICG00000026849) #22	KANK3 (ENSMICG00000029751) #23	ANGPTL4 (ENSMICG00000002426) #24	ENSMICG00000034065 #25	MARCHF2 (ENSMICG00000002527) #26	HNRNPM (ENSMICG00000002532) #27	PRAM1 (ENSMICG00000038402) #28	ZNF414 (ENSMICG00000006194) #29	MYO1F (ENSMICG00000006198) #30	ENSMICG00000006214 #31	ZNF653 (ENSMICG00000034400)	ENSMICG00000045642	HOMER3 (ENSMICG00000038004)	ENSMICG00000003656	DDX49 (ENSMICG00000003640)	COPE (ENSMICG00000003630)
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00400000024336	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00440000039287 #37
Tarsier	MODERN SPECIES	5477														CD320 (ENSTSYG00000000549) #20	NDUFA7 (ENSTSYG00000032237) #21	RPS28 (ENSTSYG00000031396) #22	ENSTSYG00000028550 #23	ANGPTL4 (ENSTSYG00000037030) #24	RAB11B (ENSTSYG00000014758)	MARCH2 (ENSTSYG00000031381) #26	ENSTSYG00000011487 #27	PRAM1 (ENSTSYG00000037065) #28
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00400000024336	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00440000039287 #37
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00400000024336	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000167383	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00910000148866	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844.a #35
Hominidae	ANCESTRAL SPECIES		ENSGT00940000167383	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00440000039287 #37
Orangutan	DUPLICATION
Orangutan	MODERN SPECIES	1	ENSPPYG00000002290	MAT1A (ENSPPYG00000002291)	ANXA11 (ENSPPYG00000002292)	PLAC9 (ENSPPYG00000038414)	TMEM254 (ENSPPYG00000002293)	ENSPPYG00000002294	ENSPPYG00000002295	ENSPPYG00000041507	ENSPPYG00000039923	ZCCHC24 (ENSPPYG00000035309)	PPIF (ENSPPYG00000002301)	ZMIZ1 (ENSPPYG00000002302)	RPS24 (ENSPPYG00000002304)	POLR3A (ENSPPYG00000002305)	DLG5 (ENSPPYG00000002306)	ENSPPYG00000002308 #22	KCNMA1 (ENSPPYG00000002311)	LRMDA (ENSPPYG00000002312)	ZNF503 (ENSPPYG00000002853)	COMTD1 (ENSPPYG00000002314)	VDAC2 (ENSPPYG00000037153)	ENSPPYG00000002315	DUSP13 (ENSPPYG00000002316)	DUSP29 (ENSPPYG00000002317)	ENSPPYG00000039682	ENSPPYG00000039462	ADK (ENSPPYG00000002319)	ENSPPYG00000037496	ENSPPYG00000031666	AP3M1 (ENSPPYG00000002322)	VCL (ENSPPYG00000002323)
Orangutan	MODERN SPECIES	10	ENSPPYG00000009486	CD209 (ENSPPYG00000040087)	ENSPPYG00000009487	EVI5L (ENSPPYG00000009489)	LRRC8E (ENSPPYG00000009491)	ENSPPYG00000009493	SNAPC2 (ENSPPYG00000009494)	CTXN1 (ENSPPYG00000030057)	TIMM44 (ENSPPYG00000009495)	ELAVL1 (ENSPPYG00000009496)	CCL25 (ENSPPYG00000009497)	FBN3 (ENSPPYG00000009498)	CERS4 (ENSPPYG00000009499)	ENSPPYG00000009500 #20	ENSPPYG00000009501 #21	ENSPPYG00000037647 #22	KANK3 (ENSPPYG00000009502) #23	ANGPTL4 (ENSPPYG00000009503) #24	RAB11B (ENSPPYG00000009504)	MARCHF2 (ENSPPYG00000009505) #26	HNRNPM (ENSPPYG00000009506) #27	ZNF414 (ENSPPYG00000009508) #29	MYO1F (ENSPPYG00000009509) #30	ADAMTS10 (ENSPPYG00000009510) #31	NFILZ (ENSPPYG00000037268) #32	ACTL9 (ENSPPYG00000009511) #33	ZNF558 (ENSPPYG00000039432) #35	MBD3L1 (ENSPPYG00000009514) #36	OR1M1 (ENSPPYG00000009517)	OR7G2 (ENSPPYG00000009518)	ZNF317 (ENSPPYG00000009520)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000156197.s.a.b	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00440000039287 #37
Gorilla	MODERN SPECIES	10	ENSGGOG00000025707	CLEC4M (ENSGGOG00000015715)	EVI5L (ENSGGOG00000001967)	PRR36 (ENSGGOG00000001971)	LRRC8E (ENSGGOG00000024318)	MAP2K7 (ENSGGOG00000012376)	TGFBR3L (ENSGGOG00000039729)	SNAPC2 (ENSGGOG00000022392)	TIMM44 (ENSGGOG00000005220)	ELAVL1 (ENSGGOG00000006100)	CCL25 (ENSGGOG00000005280)	FBN3 (ENSGGOG00000004780)	CERS4 (ENSGGOG00000011145)	CD320 (ENSGGOG00000000923) #20	NDUFA7 (ENSGGOG00000000924) #21	RPS28 (ENSGGOG00000024725) #22	KANK3 (ENSGGOG00000000926) #23	ANGPTL4 (ENSGGOG00000014506) #24	ENSGGOG00000014516 #25	MARCHF2 (ENSGGOG00000025279) #26	HNRNPM (ENSGGOG00000003498) #27	PRAM1 (ENSGGOG00000003508) #28	ZNF414 (ENSGGOG00000003514) #29	MYO1F (ENSGGOG00000027383) #30	ADAMTS10 (ENSGGOG00000009626) #31	ACTL9 (ENSGGOG00000014253) #33	ENSGGOG00000036817	ZNF558 (ENSGGOG00000043471) #35	MBD3L1 (ENSGGOG00000008272) #36	OR7G1 (ENSGGOG00000015244)	OR7G3 (ENSGGOG00000006778)
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000156197.s.a.b	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00440000039287 #37
Human	MODERN SPECIES	10	CLEC4M (ENSG00000104938)	EVI5L (ENSG00000142459)	PRR36 (ENSG00000183248)	LRRC8E (ENSG00000171017)	MAP2K7 (ENSG00000076984)	TGFBR3L (ENSG00000260001)	SNAPC2 (ENSG00000104976)	CTXN1 (ENSG00000178531)	TIMM44 (ENSG00000104980)	ELAVL1 (ENSG00000066044)	CCL25 (ENSG00000131142)	FBN3 (ENSG00000142449)	CERS4 (ENSG00000090661)	CD320 (ENSG00000167775) #20	NDUFA7 (ENSG00000267855) #21	RPS28 (ENSG00000233927) #22	KANK3 (ENSG00000186994) #23	ANGPTL4 (ENSG00000167772) #24	RAB11B (ENSG00000185236)	MARCHF2 (ENSG00000099785) #26	HNRNPM (ENSG00000099783) #27	PRAM1 (ENSG00000133246) #28	ZNF414 (ENSG00000133250) #29	MYO1F (ENSG00000142347) #30	ADAMTS10 (ENSG00000142303) #31	NFILZ (ENSG00000268480) #32	ACTL9 (ENSG00000181786) #33	OR2Z1 (ENSG00000181733) #34	ZNF558 (ENSG00000167785) #35	MBD3L1 (ENSG00000170948) #36	MUC16 (ENSG00000181143) #37
Pan	ANCESTRAL SPECIES	14	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000156197.s.a.b	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00940000154619	ENSGT00940000163146
Chimpanzee	MODERN SPECIES	10	EVI5L (ENSPTRG00000010405)	PRR36 (ENSPTRG00000010406)	ENSPTRG00000043410	LRRC8E (ENSPTRG00000010408)	MAP2K7 (ENSPTRG00000010409)	TGFBR3L (ENSPTRG00000044481)	SNAPC2 (ENSPTRG00000042034)	CTXN1 (ENSPTRG00000051848)	TIMM44 (ENSPTRG00000010412)	ELAVL1 (ENSPTRG00000010413)	CCL25 (ENSPTRG00000010414)	FBN3 (ENSPTRG00000010415)	CERS4 (ENSPTRG00000010416)	CD320 (ENSPTRG00000010417) #20	NDUFA7 (ENSPTRG00000010418) #21	RPS28 (ENSPTRG00000040141) #22	KANK3 (ENSPTRG00000010419) #23	ANGPTL4 (ENSPTRG00000010420) #24	RAB11B (ENSPTRG00000010422) #25	MARCHF2 (ENSPTRG00000010423) #26	HNRNPM (ENSPTRG00000010424) #27	PRAM1 (ENSPTRG00000010425) #28	ZNF414 (ENSPTRG00000010427) #29	MYO1F (ENSPTRG00000010428) #30	ADAMTS10 (ENSPTRG00000010429) #31	ACTL9 (ENSPTRG00000029143) #33	OR2Z1 (ENSPTRG00000010430) #34	ZNF558 (ENSPTRG00000050215) #35	MBD3L1 (ENSPTRG00000010433) #36	ENSPTRG00000048176	OR7G1 (ENSPTRG00000044391)
Bonobo	MODERN SPECIES	10	EVI5L (ENSPPAG00000035922)	ENSPPAG00000039947	ENSPPAG00000026915	LRRC8E (ENSPPAG00000036697)	MAP2K7 (ENSPPAG00000039095)	TGFBR3L (ENSPPAG00000029580)	SNAPC2 (ENSPPAG00000032460)	CTXN1 (ENSPPAG00000010442)	TIMM44 (ENSPPAG00000043896)	ELAVL1 (ENSPPAG00000035262)	CCL25 (ENSPPAG00000031289)	FBN3 (ENSPPAG00000031224)	CERS4 (ENSPPAG00000041286)	CD320 (ENSPPAG00000031620) #20	NDUFA7 (ENSPPAG00000043893) #21	RPS28 (ENSPPAG00000028825) #22	ENSPPAG00000033255 #23	ANGPTL4 (ENSPPAG00000034759) #24	ENSPPAG00000028589 #25	MARCHF2 (ENSPPAG00000000150) #26	HNRNPM (ENSPPAG00000039365) #27	ENSPPAG00000040760 #28	MYO1F (ENSPPAG00000031899) #30	ADAMTS10 (ENSPPAG00000040699) #31	ACTL9 (ENSPPAG00000014650) #33	OR2Z1 (ENSPPAG00000018967) #34	ZNF558 (ENSPPAG00000035925) #35	MBD3L1 (ENSPPAG00000016338) #36	OR7G1 (ENSPPAG00000013663)	OR7G3 (ENSPPAG00000015342)	ZNF317 (ENSPPAG00000034111)
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES	6	ENSNLEG00000001291	TERF1 (ENSNLEG00000031169)	SBSPON (ENSNLEG00000001293)	ENSNLEG00000027882	C8orf89 (ENSNLEG00000031508)	ENSNLEG00000031589	RDH10 (ENSNLEG00000031895)	STAU2 (ENSNLEG00000001342)	ENSNLEG00000028950	ENSNLEG00000030625	ENSNLEG00000029754	TMEM70 (ENSNLEG00000031739)	LY96 (ENSNLEG00000027487)	JPH1 (ENSNLEG00000001671)	GDAP1 (ENSNLEG00000001708)	ENSNLEG00000034904 #22	PI15 (ENSNLEG00000028636)	ENSNLEG00000036127	CRISPLD1 (ENSNLEG00000001758)	HNF4G (ENSNLEG00000001920)	ENSNLEG00000033520	ZFHX4 (ENSNLEG00000001972)	PEX2 (ENSNLEG00000002007)	PKIA (ENSNLEG00000002025)	ZC2HC1A (ENSNLEG00000002029)	IL7 (ENSNLEG00000002086)	STMN2 (ENSNLEG00000002114)	HEY1 (ENSNLEG00000030175)	ENSNLEG00000034481	ENSNLEG00000002256	ENSNLEG00000034160
Gibbon	MODERN SPECIES	13	MDFIC2 (ENSNLEG00000030576)	FOXP1 (ENSNLEG00000002497)	ENSNLEG00000002684	PROK2 (ENSNLEG00000002696)	RYBP (ENSNLEG00000031222)	SHQ1 (ENSNLEG00000002731)	ENSNLEG00000029680	GXYLT2 (ENSNLEG00000002790)	ENSNLEG00000035814	PPP4R2 (ENSNLEG00000029576)	PDZRN3 (ENSNLEG00000002833)	ENSNLEG00000036254	CNTN3 (ENSNLEG00000002884)	CHL1 (ENSNLEG00000002952)	CNTN6 (ENSNLEG00000003079)	ENSNLEG00000029240 #22	ENSNLEG00000034611	CNTN4 (ENSNLEG00000003113)	IL5RA (ENSNLEG00000003193)	TRNT1 (ENSNLEG00000003226)	CRBN (ENSNLEG00000003256)	LRRN1 (ENSNLEG00000003325)	ENSNLEG00000003327	SETMAR (ENSNLEG00000003331)	SUMF1 (ENSNLEG00000003334)	ITPR1 (ENSNLEG00000003382)	ENSNLEG00000003704	ARL8B (ENSNLEG00000034641)	EDEM1 (ENSNLEG00000003738)	ENSNLEG00000036159	ENSNLEG00000032377
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00400000024336	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00440000039287 #37
Rhinopithecus	ANCESTRAL SPECIES	5	ENSGT00940000161836	ENSGT00940000155012.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000160844.a #35	ENSGT00940000162241	ENSGT00940000153277.A.a	ENSGT00940000156425	ENSGT00940000153686
Black snub-nosed monkey	MODERN SPECIES	631	ENSRBIG00000012863	CLEC4G (ENSRBIG00000030982)	CD209 (ENSRBIG00000032271)	EVI5L (ENSRBIG00000036815)	PRR36 (ENSRBIG00000041595)	LRRC8E (ENSRBIG00000040670)	MAP2K7 (ENSRBIG00000041907)	TGFBR3L (ENSRBIG00000039173)	SNAPC2 (ENSRBIG00000044314)	TIMM44 (ENSRBIG00000038040)	ENSRBIG00000032339	FBN3 (ENSRBIG00000036086)	CERS4 (ENSRBIG00000027720)	CD320 (ENSRBIG00000001373) #20	NDUFA7 (ENSRBIG00000041772) #21	RPS28 (ENSRBIG00000042335) #22	KANK3 (ENSRBIG00000036072) #23	ANGPTL4 (ENSRBIG00000041585) #24	ENSRBIG00000013864	MARCHF2 (ENSRBIG00000038979) #26	HNRNPM (ENSRBIG00000041503) #27	PRAM1 (ENSRBIG00000034004) #28	ZNF414 (ENSRBIG00000038458) #29	MYO1F (ENSRBIG00000031467) #30	ADAMTS10 (ENSRBIG00000039319) #31	ZNF558 (ENSRBIG00000039683) #35	ZNF317 (ENSRBIG00000027750)	ENSRBIG00000023121	ENSRBIG00000029216	ZNF699 (ENSRBIG00000042302)	ZNF559 (ENSRBIG00000037439)
Golden snub-nosed monkey	MODERN SPECIES	2705												ENSRROG00000040503	CD320 (ENSRROG00000038178) #20	NDUFA7 (ENSRROG00000041841) #21	KANK3 (ENSRROG00000042744) #23	RPS28 (ENSRROG00000009415) #22	ANGPTL4 (ENSRROG00000029593) #24	ENSRROG00000037812 #25	MARCHF2 (ENSRROG00000045422) #26	ENSRROG00000038240 #27	PRAM1 (ENSRROG00000034408) #28	ZNF414 (ENSRROG00000039297) #29	MYO1F (ENSRROG00000040817) #30	ADAMTS10 (ENSRROG00000041926) #31	ZNF558 (ENSRROG00000036466) #35	ZNF317 (ENSRROG00000045625)	OR7E24 (ENSRROG00000042290)	ENSRROG00000042305	ZNF699 (ENSRROG00000033631)
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00400000024336	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00440000039287 #37
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000155012.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00940000163044
Macaca	ANCESTRAL SPECIES	24	ENSGT00940000155012.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00940000163044	ENSGT00940000162241
Pig-tailed macaque	MODERN SPECIES	76	CLEC4G (ENSMNEG00000032330)	ENSMNEG00000006635	CD209 (ENSMNEG00000033113)	EVI5L (ENSMNEG00000032835)	PRR36 (ENSMNEG00000045017)	LRRC8E (ENSMNEG00000030858)	SNAPC2 (ENSMNEG00000039547)	CTXN1 (ENSMNEG00000016133)	TIMM44 (ENSMNEG00000036302)	ELAVL1 (ENSMNEG00000028431)	CCL25 (ENSMNEG00000043477)	FBN3 (ENSMNEG00000042833)	CERS4 (ENSMNEG00000035560)	CD320 (ENSMNEG00000029539) #20	NDUFA7 (ENSMNEG00000035512) #21	RPS28 (ENSMNEG00000036447) #22	KANK3 (ENSMNEG00000032044) #23	ANGPTL4 (ENSMNEG00000039040) #24	ENSMNEG00000039759	ENSMNEG00000035563	HNRNPM (ENSMNEG00000036546) #27	PRAM1 (ENSMNEG00000036192) #28	ZNF414 (ENSMNEG00000033701) #29	MYO1F (ENSMNEG00000039218) #30	ADAMTS10 (ENSMNEG00000040648) #31	ZNF558 (ENSMNEG00000035004) #35	ZNF317 (ENSMNEG00000026253)	OR7E24 (ENSMNEG00000041152)	ENSMNEG00000031874	OR7D4 (ENSMNEG00000022452)	ZNF699 (ENSMNEG00000043733)
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000161836	ENSGT00940000155012.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000164709.a.b.b.a.a.b.b.a.b.a.b.a	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00940000163044
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000054103	ENSMFAG00000061221	EVI5L (ENSMFAG00000045931)	LRRC8E (ENSMFAG00000038156)	MAP2K7 (ENSMFAG00000031756)	ENSMFAG00000050179	SNAPC2 (ENSMFAG00000034273)	TIMM44 (ENSMFAG00000037515)	ENSMFAG00000064115	ELAVL1 (ENSMFAG00000040787)	CCL25 (ENSMFAG00000034081)	FBN3 (ENSMFAG00000035371)	CERS4 (ENSMFAG00000044404)	ENSMFAG00000053865	CD320 (ENSMFAG00000013824) #20	RPS28 (ENSMFAG00000042430) #22	ANGPTL4 (ENSMFAG00000003517) #24	ENSMFAG00000063041	ENSMFAG00000003654 #25	MARCHF2 (ENSMFAG00000064335) #26	HNRNPM (ENSMFAG00000037617) #27	ENSMFAG00000062631	MYO1F (ENSMFAG00000050770) #30	ADAMTS10 (ENSMFAG00000040772) #31	ENSMFAG00000056242	NFILZ (ENSMFAG00000065017) #32	ACTL9 (ENSMFAG00000051542) #33	ZNF558 (ENSMFAG00000036165) #35	OR1M1 (ENSMFAG00000056405)	ZNF317 (ENSMFAG00000036858)	ENSMFAG00000061840
Rhesus	MODERN SPECIES	10	CD209 (ENSMMUG00000022463)	ENSMMUG00000022459	EVI5L (ENSMMUG00000023303)	PRR36 (ENSMMUG00000014032)	LRRC8E (ENSMMUG00000005424)	TGFBR3L (ENSMMUG00000042364)	SNAPC2 (ENSMMUG00000006540)	CTXN1 (ENSMMUG00000063148)	TIMM44 (ENSMMUG00000006542)	ELAVL1 (ENSMMUG00000006544)	CCL25 (ENSMMUG00000010614)	FBN3 (ENSMMUG00000061632)	CERS4 (ENSMMUG00000011178)	ENSMMUG00000052371	CD320 (ENSMMUG00000016695) #20	RPS28 (ENSMMUG00000028895) #22	KANK3 (ENSMMUG00000016699) #23	ANGPTL4 (ENSMMUG00000000698) #24	ENSMMUG00000050846	RAB11B (ENSMMUG00000010225)	MARCHF2 (ENSMMUG00000043959) #26	HNRNPM (ENSMMUG00000018806) #27	PRAM1 (ENSMMUG00000018808) #28	ZNF414 (ENSMMUG00000019918) #29	MYO1F (ENSMMUG00000014247) #30	ADAMTS10 (ENSMMUG00000016821) #31	NFILZ (ENSMMUG00000064610) #32	ACTL9 (ENSMMUG00000000818) #33	ZNF558 (ENSMMUG00000049311) #35	MBD3L1 (ENSMMUG00000019965) #36	OR1M1 (ENSMMUG00000059930)
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00940000155012.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00940000163044	ENSGT00940000162241
Olive baboon	MODERN SPECIES	12	FCER2 (ENSPANG00000034142)	CLEC4G (ENSPANG00000023737)	CD209 (ENSPANG00000038812)	EVI5L (ENSPANG00000006328)	LRRC8E (ENSPANG00000013864)	MAP2K7 (ENSPANG00000025885)	TGFBR3L (ENSPANG00000025884)	SNAPC2 (ENSPANG00000025882)	CTXN1 (ENSPANG00000014766)	TIMM44 (ENSPANG00000025880)	ELAVL1 (ENSPANG00000025878)	CCL25 (ENSPANG00000047735)	CERS4 (ENSPANG00000025898)	CD320 (ENSPANG00000025896) #20	NDUFA7 (ENSPANG00000034306) #21	RPS28 (ENSPANG00000037243) #22	KANK3 (ENSPANG00000019662) #23	ANGPTL4 (ENSPANG00000024228) #24	RAB11B (ENSPANG00000007765)	MARCHF2 (ENSPANG00000003167) #26	HNRNPM (ENSPANG00000000283) #27	ZNF414 (ENSPANG00000000284) #29	MYO1F (ENSPANG00000023736) #30	ADAMTS10 (ENSPANG00000011403) #31	NFILZ (ENSPANG00000043417) #32	ACTL9 (ENSPANG00000049301) #33	ZNF558 (ENSPANG00000051164) #35	MBD3L1 (ENSPANG00000042687) #36	OR1M1 (ENSPANG00000042449)	ZNF317 (ENSPANG00000007764)	OR7D2 (ENSPANG00000030060)
Cercopithecinae_d	ANCESTRAL SPECIES	8															ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00940000162241	ENSGT00940000156425	ENSGT00940000163210	ENSGT00940000164004
Sooty mangabey	MODERN SPECIES	212															NDUFA7 (ENSCATG00000037978) #21	RPS28 (ENSCATG00000014458) #22	KANK3 (ENSCATG00000044233) #23	ANGPTL4 (ENSCATG00000040565) #24	ENSCATG00000029188 #25	MARCHF2 (ENSCATG00000037535) #26	HNRNPM (ENSCATG00000035478) #27	PRAM1 (ENSCATG00000036215) #28	ZNF414 (ENSCATG00000030573) #29	MYO1F (ENSCATG00000040319) #30	ADAMTS10 (ENSCATG00000037858) #31	ZNF558 (ENSCATG00000044831) #35	ZNF317 (ENSCATG00000035588)	ENSCATG00000037863	ZNF699 (ENSCATG00000014891)
Drill	MODERN SPECIES	1486															NDUFA7 (ENSMLEG00000037260) #21	RPS28 (ENSMLEG00000036014) #22	ENSMLEG00000037944 #23	ENSMLEG00000029592 #23	ANGPTL4 (ENSMLEG00000030718) #24	ENSMLEG00000030601 #25	MARCHF2 (ENSMLEG00000029114) #26	HNRNPM (ENSMLEG00000042113) #27	PRAM1 (ENSMLEG00000040464) #28	ZNF414 (ENSMLEG00000037008) #29	MYO1F (ENSMLEG00000029789) #30	ADAMTS10 (ENSMLEG00000033505) #31
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00940000155012.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00940000163044	ENSGT00940000163146	ENSGT00940000162241	ENSGT00940000163210
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	610	ENSANAG00000032785	ENSANAG00000020722	ENSANAG00000012447	GABRG2 (ENSANAG00000028052)	GABRA1 (ENSANAG00000035278)	GABRA6 (ENSANAG00000028573)	GABRB2 (ENSANAG00000035589)	ATP10B (ENSANAG00000022261)	ENSANAG00000015848	SLU7 (ENSANAG00000028320)	FAM200C (ENSANAG00000015834)	C1QTNF2 (ENSANAG00000021073)	ENSANAG00000024116	CCNJL (ENSANAG00000036259)	FABP6 (ENSANAG00000022293)	ENSANAG00000034851 #22	PWWP2A (ENSANAG00000037542)	TTC1 (ENSANAG00000032998)	ADRA1B (ENSANAG00000029288)	ENSANAG00000020188	IL12B (ENSANAG00000007646)	UBLCP1 (ENSANAG00000014625)	RNF145 (ENSANAG00000028773)	EBF1 (ENSANAG00000036087)	ENSANAG00000010880
Mas night monkey	MODERN SPECIES	937	ENSANAG00000026389	EVI5L (ENSANAG00000028460)	PRR36 (ENSANAG00000033942)	LRRC8E (ENSANAG00000029805)	MAP2K7 (ENSANAG00000033002)	TGFBR3L (ENSANAG00000033435)	SNAPC2 (ENSANAG00000029939)	CTXN1 (ENSANAG00000016882)	TIMM44 (ENSANAG00000032251)	ENSANAG00000037170	CCL25 (ENSANAG00000034778)	FBN3 (ENSANAG00000036627)	CERS4 (ENSANAG00000035562)	CD320 (ENSANAG00000035570) #20	ENSANAG00000021631 #21	ENSANAG00000036427 #22	KANK3 (ENSANAG00000036657) #23	ANGPTL4 (ENSANAG00000033820) #24	RAB11B (ENSANAG00000037616)	MARCHF2 (ENSANAG00000019800) #26	HNRNPM (ENSANAG00000025358) #27	PRAM1 (ENSANAG00000036679) #28	ZNF414 (ENSANAG00000037244) #29	MYO1F (ENSANAG00000017950) #30	ADAMTS10 (ENSANAG00000026146) #31	ZNF558 (ENSANAG00000007813) #35	ZNF317 (ENSANAG00000023090)	ENSANAG00000018556	OR7E24 (ENSANAG00000023135)	ZNF699 (ENSANAG00000037701)	ENSANAG00000019494
Mas night monkey	MODERN SPECIES	1090							FBXW7 (ENSANAG00000033087)	TMEM154 (ENSANAG00000034998)	TIGD4 (ENSANAG00000018977)	ARFIP1 (ENSANAG00000032224)	ENSANAG00000027141	FHDC1 (ENSANAG00000036159)	ENSANAG00000026430	TRIM2 (ENSANAG00000033669)	ENSANAG00000035846	ENSANAG00000019522 #22	TMEM131L (ENSANAG00000022263)	RNF175 (ENSANAG00000029450)	SFRP2 (ENSANAG00000021159)	ENSANAG00000036973	DCHS2 (ENSANAG00000032762)	PLRG1 (ENSANAG00000036805)	FGB (ENSANAG00000033162)	ENSANAG00000022740	FGG (ENSANAG00000030028)	LRAT (ENSANAG00000029147)	RBM46 (ENSANAG00000029193)	NPY2R (ENSANAG00000031448)	MAP9 (ENSANAG00000031711)	GUCY1A1 (ENSANAG00000021198)	GUCY1B1 (ENSANAG00000030916)
Cebidae	ANCESTRAL SPECIES	20	ENSGT00940000155012.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36	ENSGT00940000163044	ENSGT00940000163146	ENSGT00940000162241	ENSGT00940000163210
Marmoset	MODERN SPECIES	14	ENSCJAG00000015556	CD209 (ENSCJAG00000006032)	EVI5L (ENSCJAG00000006059)	LRRC8E (ENSCJAG00000006077)	MAP2K7 (ENSCJAG00000082705)	TGFBR3L (ENSCJAG00000046411)	SNAPC2 (ENSCJAG00000006117)	CTXN1 (ENSCJAG00000046027)	TIMM44 (ENSCJAG00000006140)	ELAVL1 (ENSCJAG00000046587)	CCL25 (ENSCJAG00000006163)	FBN3 (ENSCJAG00000006168)	CERS4 (ENSCJAG00000010661)	ENSCJAG00000038461	CD320 (ENSCJAG00000010700) #20	RPS28 (ENSCJAG00000010726) #22	KANK3 (ENSCJAG00000010732) #23	ENSCJAG00000077168	ANGPTL4 (ENSCJAG00000010768) #24	RAB11B (ENSCJAG00000010778)	MARCHF2 (ENSCJAG00000010794) #26	HNRNPM (ENSCJAG00000010802) #27	PRAM1 (ENSCJAG00000010913) #28	ZNF414 (ENSCJAG00000010927) #29	MYO1F (ENSCJAG00000038608) #30	ADAMTS10 (ENSCJAG00000010967) #31	ENSCJAG00000079050	ENSCJAG00000084738	NFILZ (ENSCJAG00000083414) #32	ACTL9 (ENSCJAG00000022426) #33	OR2Z1 (ENSCJAG00000022427) #34
Cebidae_a	ANCESTRAL SPECIES	9	ENSGT00940000155012.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000160844.a #35	ENSGT00940000162241	ENSGT00940000163210	ENSGT00940000164004	ENSGT00940000163463	ENSGT00940000162380
Capuchin	MODERN SPECIES	263	CD209 (ENSCCAG00000019752)	EVI5L (ENSCCAG00000036414)	PRR36 (ENSCCAG00000032270)	LRRC8E (ENSCCAG00000030598)	MAP2K7 (ENSCCAG00000026261)	TGFBR3L (ENSCCAG00000024020)	SNAPC2 (ENSCCAG00000034172)	CTXN1 (ENSCCAG00000020174)	TIMM44 (ENSCCAG00000031644)	ELAVL1 (ENSCCAG00000025328)	CCL25 (ENSCCAG00000025560)	FBN3 (ENSCCAG00000033590)	CERS4 (ENSCCAG00000034625)	CD320 (ENSCCAG00000033119) #20	NDUFA7 (ENSCCAG00000022136) #21	RPS28 (ENSCCAG00000030298) #22	KANK3 (ENSCCAG00000021820) #23	ANGPTL4 (ENSCCAG00000025028) #24	RAB11B (ENSCCAG00000031042)	MARCHF2 (ENSCCAG00000024442) #26	HNRNPM (ENSCCAG00000018782) #27	PRAM1 (ENSCCAG00000028323) #28	ZNF414 (ENSCCAG00000025848) #29	MYO1F (ENSCCAG00000035877) #30	ADAMTS10 (ENSCCAG00000028986) #31	ZNF558 (ENSCCAG00000012617) #35	ENSCCAG00000024658	ZNF317 (ENSCCAG00000018106)	ZNF699 (ENSCCAG00000034661)	ENSCCAG00000027457	ZNF177 (ENSCCAG00000034694)
Bolivian squirrel monkey	DUPLICATION
Bolivian squirrel monkey	MODERN SPECIES	109	MAT2B (ENSSBOG00000035087)	ENSSBOG00000027545	NUDCD2 (ENSSBOG00000028393)	GABRG2 (ENSSBOG00000027465)	GABRA1 (ENSSBOG00000029701)	GABRA6 (ENSSBOG00000028112)	GABRB2 (ENSSBOG00000006216)	ENSSBOG00000021032	ATP10B (ENSSBOG00000031861)	ENSSBOG00000012956	SLU7 (ENSSBOG00000003225)	FAM200C (ENSSBOG00000018847)	C1QTNF2 (ENSSBOG00000032053)	CCNJL (ENSSBOG00000022971)	FABP6 (ENSSBOG00000024801)	ENSSBOG00000008426 #22	PWWP2A (ENSSBOG00000025619)	TTC1 (ENSSBOG00000030335)	ADRA1B (ENSSBOG00000023488)	IL12B (ENSSBOG00000025424)	UBLCP1 (ENSSBOG00000022274)	RNF145 (ENSSBOG00000034936)	EBF1 (ENSSBOG00000027616)	ENSSBOG00000022000	CLINT1 (ENSSBOG00000025062)	LSM11 (ENSSBOG00000020709)	THG1L (ENSSBOG00000024790)	C5orf52 (ENSSBOG00000027715)	SOX30 (ENSSBOG00000020019)	ADAM19 (ENSSBOG00000006447)	NIPAL4 (ENSSBOG00000030733)
Bolivian squirrel monkey	MODERN SPECIES	150	ENSSBOG00000033786	CLEC4M (ENSSBOG00000032670)	EVI5L (ENSSBOG00000028287)	PRR36 (ENSSBOG00000025280)	LRRC8E (ENSSBOG00000027556)	MAP2K7 (ENSSBOG00000033007)	TGFBR3L (ENSSBOG00000034139)	SNAPC2 (ENSSBOG00000011587)	TIMM44 (ENSSBOG00000015126)	ELAVL1 (ENSSBOG00000028871)	CCL25 (ENSSBOG00000020279)	FBN3 (ENSSBOG00000027131)	CERS4 (ENSSBOG00000023727)	CD320 (ENSSBOG00000035853) #20	NDUFA7 (ENSSBOG00000032110) #21	ENSSBOG00000012561 #22	ENSSBOG00000036262 #23	ANGPTL4 (ENSSBOG00000036274) #24	RAB11B (ENSSBOG00000035094)	MARCHF2 (ENSSBOG00000035515) #26	ENSSBOG00000033638	HNRNPM (ENSSBOG00000032416) #27	PRAM1 (ENSSBOG00000035353) #28	ZNF414 (ENSSBOG00000034279) #29	MYO1F (ENSSBOG00000013487) #30	ADAMTS10 (ENSSBOG00000033434) #31	ZNF558 (ENSSBOG00000026599) #35	ZNF317 (ENSSBOG00000018054)	ENSSBOG00000024235	ENSSBOG00000033134	ZNF699 (ENSSBOG00000020395)
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00400000024336	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36
Glires	DUPLICATION
Glires	DUPLICATION
Glires	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.a #22
Rodentia	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.a #22
Rodentia_B	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.a #22
Myomorpha	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.a #22
Muroidea	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.a #22
Upper Galilee mountains blind mole rat	MODERN SPECIES	1274	Pet100 (ENSNGAG00000013697)	ENSNGAG00000017173	Camsap3 (ENSNGAG00000010370)	Pnpla6 (ENSNGAG00000003086)	Mcoln1 (ENSNGAG00000018276)	Zfp358 (ENSNGAG00000016868)	Tex45 (ENSNGAG00000018173)	Pex11g (ENSNGAG00000020756)	Arhgef18 (ENSNGAG00000001074)	ENSNGAG00000019898	ENSNGAG00000000232	Insr (ENSNGAG00000004448)	ENSNGAG00000017267	Cd320 (ENSNGAG00000017906) #20	Ndufa7 (ENSNGAG00000000050) #21	ENSNGAG00000000148 #22	Kank3 (ENSNGAG00000000666) #23	Angptl4 (ENSNGAG00000014801) #24	Rab11b (ENSNGAG00000015757)	Marchf2 (ENSNGAG00000018673) #26	Hnrnpm (ENSNGAG00000003707) #27	Pram1 (ENSNGAG00000000156) #28	Zfp414 (ENSNGAG00000001048) #29	Myo1f (ENSNGAG00000011575) #30	Adamts10 (ENSNGAG00000002825) #31	Actl9 (ENSNGAG00000013965) #33
Glires	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.b #22
Lagomorpha	ANCESTRAL SPECIES	85	ENSGT00940000162574	ENSGT00940000161836	ENSGT00940000155012.f.a	ENSGT00940000159311.c	ENSGT00940000153846.a.b	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.j.b #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183069.b.b	ENSGT00950000182788.a.b.b.b
Rabbit	MODERN SPECIES	500	FCER2 (ENSOCUG00000024433)	ENSOCUG00000016293	ENSOCUG00000010890	LRRC8E (ENSOCUG00000029461)	EVI5L (ENSOCUG00000010898)	MAP2K7 (ENSOCUG00000024299)	TGFBR3L (ENSOCUG00000039514)	SNAPC2 (ENSOCUG00000027536)	TIMM44 (ENSOCUG00000023159)	ELAVL1 (ENSOCUG00000015871)	ENSOCUG00000025780	FBN3 (ENSOCUG00000011511)	CERS4 (ENSOCUG00000005369)	CD320 (ENSOCUG00000025026) #20	NDUFA7 (ENSOCUG00000009522) #21	RPS28 (ENSOCUG00000021484) #22	KANK3 (ENSOCUG00000009525) #23	ANGPTL4 (ENSOCUG00000016603) #24	RAB11B (ENSOCUG00000028208)	MARCHF2 (ENSOCUG00000008321) #26	ENSOCUG00000000552 #27	PRAM1 (ENSOCUG00000000555) #28	ZNF414 (ENSOCUG00000027412) #29	MYO1F (ENSOCUG00000000558) #30	ADAMTS10 (ENSOCUG00000026658) #31	ENSOCUG00000032497 #32	ACTL9 (ENSOCUG00000029481) #33	OR2Z1 (ENSOCUG00000011183) #34	ENSOCUG00000032591	ENSOCUG00000023258
Rodentia	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.b #22
Rodentia_A	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.b #22
Sciuridae	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.b #22
Marmotini	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.b #22
Marmotini_b	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.b #22
Squirrel	MODERN SPECIES	188	ENSSTOG00000020523	ENSSTOG00000021108	EVI5L (ENSSTOG00000008992)	ENSSTOG00000028455	LRRC8E (ENSSTOG00000028937)	MAP2K7 (ENSSTOG00000009084)	TGFBR3L (ENSSTOG00000031738)	SNAPC2 (ENSSTOG00000009102)	CTXN1 (ENSSTOG00000030571)	TIMM44 (ENSSTOG00000019444)	ELAVL1 (ENSSTOG00000009130)	FBN3 (ENSSTOG00000003543)	CERS4 (ENSSTOG00000021515)	CD320 (ENSSTOG00000008071) #20	NDUFA7 (ENSSTOG00000022681) #21	RPS28 (ENSSTOG00000022842) #22	KANK3 (ENSSTOG00000029027) #23	ANGPTL4 (ENSSTOG00000008075) #24	RAB11B (ENSSTOG00000031571)	MARCHF2 (ENSSTOG00000008089) #26	HNRNPM (ENSSTOG00000008112) #27	PRAM1 (ENSSTOG00000028598) #28	ZNF414 (ENSSTOG00000028879) #29	MYO1F (ENSSTOG00000008262) #30	ADAMTS10 (ENSSTOG00000026527) #31	ACTL9 (ENSSTOG00000010273) #33	OR2Z1 (ENSSTOG00000002427) #34	ZNF558 (ENSSTOG00000002432) #35	ENSSTOG00000011957 #37	ENSSTOG00000033217	ENSSTOG00000027223
Rodentia_B	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.b #22
Myomorpha	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.b #22
Muroidea	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.b #22
Muroidea_A	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.h.j.b #22
Murinae	ANCESTRAL SPECIES	25													ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00910000144227.s.a.h.j.b #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012.g #33	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.a.b ##19	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.b.a ##19	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.b.b ##19	ENSGT01060000248581.A.b
Rat	MODERN SPECIES	17	ENSRNOG00000068522	LOC691764 (ENSRNOG00000065932)	ENSRNOG00000063083	ENSRNOG00000067334	LOC120093094 (ENSRNOG00000065103)	LOC120093114 (ENSRNOG00000071034)	LOC300308 (ENSRNOG00000048230)	Vom2r57 (ENSRNOG00000039136)	Vom2r57 (ENSRNOG00000063758)	ENSRNOG00000067350	ENSRNOG00000066006	RGD1565071 (ENSRNOG00000065381)	LOC102551633 (ENSRNOG00000050249)	LOC108348097 (ENSRNOG00000026976)	Cd320 (ENSRNOG00000006901) #20	Rps28 (ENSRNOG00000042886) #22	Kank3 (ENSRNOG00000007230) #23	Angptl4 (ENSRNOG00000007545) #24	RGD1564744 (ENSRNOG00000011955)	Rab11b (ENSRNOG00000007648) #25	Marchf2 (ENSRNOG00000007769) #26	Hnrnpm (ENSRNOG00000007921) #27	Pram1 (ENSRNOG00000008378) #28	Myo1f (ENSRNOG00000008409) #30	Adamts10 (ENSRNOG00000008857) #31	Nfilz (ENSRNOG00000063608) #32	Actl9 (ENSRNOG00000049571) #33	AABR07056013.1 (ENSRNOG00000009072)	Zfp494 (ENSRNOG00000042772)	Vom1r108 (ENSRNOG00000048787)	Vom1r107 (ENSRNOG00000042090)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1878	Uspl1 (ENSNGAG00000021450)	ENSNGAG00000020735	Katnal1 (ENSNGAG00000018344)	Ubl3 (ENSNGAG00000021531)	Slc7a1 (ENSNGAG00000011095)	ENSNGAG00000023043	ENSNGAG00000011243	ENSNGAG00000022087	Slc46a3 (ENSNGAG00000023221)	ENSNGAG00000019389	Flt1 (ENSNGAG00000022615)	Pan3 (ENSNGAG00000005671)	Flt3 (ENSNGAG00000022203)	Cdx2 (ENSNGAG00000019299)	Pdx1 (ENSNGAG00000024275)	ENSNGAG00000011527 #22	Gsx1 (ENSNGAG00000013964)	ENSNGAG00000020643	ENSNGAG00000019459	Polr1d (ENSNGAG00000006014)	Lnx2 (ENSNGAG00000010972)	Mtif3 (ENSNGAG00000022911)	Gtf3a (ENSNGAG00000023691)	Rasl11a (ENSNGAG00000021721)	ENSNGAG00000022375	ENSNGAG00000012493	Usp12 (ENSNGAG00000023867)	ENSNGAG00000011492
Glires	ANCESTRAL SPECIES	21	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00400000024336	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183069.b.b	ENSGT00940000162163	ENSGT00940000161354
Rodentia	ANCESTRAL SPECIES	17	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00400000024336	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183069.b.b.b	ENSGT00950000183005.b.c.b ##36	ENSGT00940000160844.a #35
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00400000024336	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183069.b.b.b	ENSGT00950000183005.b.c.b ##36	ENSGT00940000160844.a #35
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00400000024336	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n.u #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000017766	EVI5L (ENSHGLG00000006112)	PRR36 (ENSHGLG00000005714)	LRRC8E (ENSHGLG00000005847)	ENSHGLG00000050671	MAP2K7 (ENSHGLG00000009771)	TGFBR3L (ENSHGLG00000010450)	SNAPC2 (ENSHGLG00000040527)	CTXN1 (ENSHGLG00000042384)	TIMM44 (ENSHGLG00000018326)	ELAVL1 (ENSHGLG00000016101)	ENSHGLG00000016245	FBN3 (ENSHGLG00000039625)	CERS4 (ENSHGLG00000015118)	ENSHGLG00000013199 #20	RPS28 (ENSHGLG00000032809) #22	ENSHGLG00000015324 #21	KANK3 (ENSHGLG00000034766) #23	ANGPTL4 (ENSHGLG00000014763) #24	ENSHGLG00000014984	MARCH2 (ENSHGLG00000006489) #26	ENSHGLG00000009796 #27	ENSHGLG00000032626 #28	ZNF414 (ENSHGLG00000010578) #29	MYO1F (ENSHGLG00000009662) #30	ADAMTS10 (ENSHGLG00000012867) #31	ENSHGLG00000038649 #32	ENSHGLG00000043531 #33	ENSHGLG00000044244 ##36	MBD3L3 (ENSHGLG00000042546) ##36	ENSHGLG00000043241 ##36
Hystricomorpha_a	ANCESTRAL SPECIES	69	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n.u #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000160844.a #35	ENSGT00440000039287 #37
Guinea pig	MODERN SPECIES	192	EVI5L (ENSCPOG00000009818)	ENSCPOG00000031478	LRRC8E (ENSCPOG00000003902)	MAP2K7 (ENSCPOG00000023036)	TGFBR3L (ENSCPOG00000039466)	SNAPC2 (ENSCPOG00000034229)	CTXN1 (ENSCPOG00000036871)	TIMM44 (ENSCPOG00000001987)	ELAVL1 (ENSCPOG00000011884)	ENSCPOG00000007131	ENSCPOG00000021546	CERS4 (ENSCPOG00000025376)	ENSCPOG00000021105	CD320 (ENSCPOG00000031573) #20	NDUFA7 (ENSCPOG00000002035) #21	RPS28 (ENSCPOG00000022876) #22	ENSCPOG00000037757 #23	ANGPTL4 (ENSCPOG00000008042) #24	RAB11B (ENSCPOG00000030154)	MARCHF2 (ENSCPOG00000015180) #26	HNRNPM (ENSCPOG00000015182) #27	PRAM1 (ENSCPOG00000031370) #28	ENSCPOG00000027253 #29	MYO1F (ENSCPOG00000007831) #30	ADAMTS10 (ENSCPOG00000024367) #31	ACTL9 (ENSCPOG00000023954) #33	ENSCPOG00000001389 #34	ENSCPOG00000025728	ENSCPOG00000027531 #34	ZNF558 (ENSCPOG00000009453) #35	ENSCPOG00000033681 #37
Hystricomorpha_b	ANCESTRAL SPECIES	93	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.A	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n.u #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000160844.a #35	ENSGT00440000039287 #37
Degu	MODERN SPECIES	255	ENSODEG00000012311	ENSODEG00000011113	ENSODEG00000010671	EVI5L (ENSODEG00000012663)	ENSODEG00000010815	LRRC8E (ENSODEG00000011497)	MAP2K7 (ENSODEG00000012972)	TGFBR3L (ENSODEG00000011690)	SNAPC2 (ENSODEG00000011415)	CTXN1 (ENSODEG00000019975)	TIMM44 (ENSODEG00000011966)	ELAVL1 (ENSODEG00000012189)	CERS4 (ENSODEG00000012322)	CD320 (ENSODEG00000011308) #20	NDUFA7 (ENSODEG00000011906) #21	RPS28 (ENSODEG00000012169) #22	ENSODEG00000013962 #23	ANGPTL4 (ENSODEG00000011879) #24	RAB11B (ENSODEG00000011371)	ENSODEG00000019849 #26	ENSODEG00000010763 #26	ENSODEG00000010314 #27	ZNF414 (ENSODEG00000010741) #29	ENSODEG00000019782	MYO1F (ENSODEG00000010712) #30	ADAMTS10 (ENSODEG00000010286) #31	OR2Z1 (ENSODEG00000019889) #34	ENSODEG00000019765	ENSODEG00000010124	ZNF558 (ENSODEG00000010485) #35	ENSODEG00000010460 #37
Long-tailed chinchilla	MODERN SPECIES	270	ENSCLAG00000001953	ENSCLAG00000003602	EVI5L (ENSCLAG00000002315)	PRR36 (ENSCLAG00000003789)	LRRC8E (ENSCLAG00000003511)	MAP2K7 (ENSCLAG00000002675)	CTXN1 (ENSCLAG00000007134)	SNAPC2 (ENSCLAG00000006885)	TIMM44 (ENSCLAG00000008481)	ELAVL1 (ENSCLAG00000007826)	ENSCLAG00000007462	ENSCLAG00000002590	CERS4 (ENSCLAG00000002452)	CD320 (ENSCLAG00000002375) #20	NDUFA7 (ENSCLAG00000002328) #21	RPS28 (ENSCLAG00000002218) #22	ENSCLAG00000002193 #23	ANGPTL4 (ENSCLAG00000003396) #24	RAB11B (ENSCLAG00000003207)	MARCHF2 (ENSCLAG00000002760) #26	ENSCLAG00000011194 #27	PRAM1 (ENSCLAG00000010229) #28	ZNF414 (ENSCLAG00000002700) #29	MYO1F (ENSCLAG00000002581) #30	ADAMTS10 (ENSCLAG00000002185) #31	OR2Z1 (ENSCLAG00000017458) #34	ENSCLAG00000004913 ##36	ZNF558 (ENSCLAG00000003907) #35	ENSCLAG00000002902 #37	ENSCLAG00000003723	ENSCLAG00000003606
Sciuridae	ANCESTRAL SPECIES	23	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528.g	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183069.b.b.b	ENSGT00950000183005.b.c.b ##36	ENSGT00940000160844.a #35
Marmotini	ANCESTRAL SPECIES	24	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528.g	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183069.b.b.b.c	ENSGT00950000183005.b.c.b ##36	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36
Alpin marmot	MODERN SPECIES	88	ENSMMMG00000021198	ENSMMMG00000021207	EVI5L (ENSMMMG00000021217)	LRRC8E (ENSMMMG00000021332)	MAP2K7 (ENSMMMG00000021333)	TGFBR3L (ENSMMMG00000021457)	SNAPC2 (ENSMMMG00000021464)	CTXN1 (ENSMMMG00000021465)	TIMM44 (ENSMMMG00000021466)	ELAVL1 (ENSMMMG00000021475)	ENSMMMG00000021486	ENSMMMG00000021496	CERS4 (ENSMMMG00000021500)	CD320 (ENSMMMG00000021502) #20	NDUFA7 (ENSMMMG00000021517) #21	RPS28 (ENSMMMG00000021523) #22	ENSMMMG00000021529 #23	ENSMMMG00000021532 #23	ANGPTL4 (ENSMMMG00000021540) #24	RAB11B (ENSMMMG00000021547)	MARCHF2 (ENSMMMG00000021551) #26	HNRNPM (ENSMMMG00000021559) #27	PRAM1 (ENSMMMG00000021639) #28	ZNF414 (ENSMMMG00000021643) #29	MYO1F (ENSMMMG00000021651) #30	ADAMTS10 (ENSMMMG00000021664) #31	ENSMMMG00000021732 #33	OR2Z1 (ENSMMMG00000021735) #34	ENSMMMG00000021736	ENSMMMG00000021763 ##36	ZNF558 (ENSMMMG00000021767) #35
Marmotini_b	ANCESTRAL SPECIES	9	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528.g	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183069.b.b.b.c	ENSGT00950000183005.b.c.b ##36	ENSGT00940000160844.a #35	ENSGT00950000183005.b.c.a #36
Arctic ground squirrel	MODERN SPECIES	507		ENSUPAG00010003719	EVI5L (ENSUPAG00010003728)	LRRC8E (ENSUPAG00010003817)	MAP2K7 (ENSUPAG00010003826)	TGFBR3L (ENSUPAG00010004107)	SNAPC2 (ENSUPAG00010004119)	CTXN1 (ENSUPAG00010004123)	TIMM44 (ENSUPAG00010004130)	ELAVL1 (ENSUPAG00010004154)	ENSUPAG00010004163	FBN3 (ENSUPAG00010004184)	CERS4 (ENSUPAG00010004265)	CD320 (ENSUPAG00010004295) #20	NDUFA7 (ENSUPAG00010004300) #21	RPS28 (ENSUPAG00010004310) #22	KANK3 (ENSUPAG00010004316) #23	ANGPTL4 (ENSUPAG00010004365) #24	RAB11B (ENSUPAG00010004384)	MARCHF2 (ENSUPAG00010004403) #26	HNRNPM (ENSUPAG00010004424) #27	PRAM1 (ENSUPAG00010004811) #28	ZNF414 (ENSUPAG00010004817) #29	MYO1F (ENSUPAG00010004834) #30	ADAMTS10 (ENSUPAG00010004866) #31	ACTL9 (ENSUPAG00010004897) #33	OR2Z1 (ENSUPAG00010004902) #34	ENSUPAG00010004916	ENSUPAG00010005619 ##36	ZNF558 (ENSUPAG00010005622) #35	MBD3L1 (ENSUPAG00010005629) #36
Rodentia_B	ANCESTRAL SPECIES	28	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00950000183069.b.b.a.b	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125
Kangaroo rat	MODERN SPECIES	489	ENSDORG00000028409	Cd209c (ENSDORG00000029898)	Evi5l (ENSDORG00000013884)	Prr36 (ENSDORG00000013885)	Lrrc8e (ENSDORG00000024582)	Map2k7 (ENSDORG00000009150)	Tgfbr3l (ENSDORG00000030191)	Snapc2 (ENSDORG00000009155)	Ctxn1 (ENSDORG00000009156)	Timm44 (ENSDORG00000009157)	Elavl1 (ENSDORG00000009158)	ENSDORG00000026099	Cers4 (ENSDORG00000012322)	Cd320 (ENSDORG00000012323) #20	Ndufa7 (ENSDORG00000012324) #21	Rps28 (ENSDORG00000027636) #22	ENSDORG00000027684 #23	Angptl4 (ENSDORG00000007178) #24	Rab11b (ENSDORG00000006304)	Marchf2 (ENSDORG00000008103) #26	Hnrnpm (ENSDORG00000008105) #27	Zfp414 (ENSDORG00000008110) #29	Myo1f (ENSDORG00000024667) #30	Adamts10 (ENSDORG00000000568) #31	ENSDORG00000005491	ENSDORG00000025750	ENSDORG00000027752	ENSDORG00000025711	ENSDORG00000027373
Myomorpha	ANCESTRAL SPECIES	27	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00950000183069.b.b.a.b.c.a.b.b	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	226	Ctxn1 (ENSJJAG00000012016)	Timm44 (ENSJJAG00000007309)	ENSJJAG00000011760	Elavl1 (ENSJJAG00000015838)	ENSJJAG00000011781	ENSJJAG00000016084	ENSJJAG00000016200	ENSJJAG00000016328	ENSJJAG00000011784	ENSJJAG00000011823	Cers4 (ENSJJAG00000016556)	ENSJJAG00000016741	ENSJJAG00000016853	Cd320 (ENSJJAG00000016969) #20	ENSJJAG00000017167 #21	ENSJJAG00000017384 #22	ENSJJAG00000017674 #23	Angptl4 (ENSJJAG00000018006) #24	ENSJJAG00000018891	Marchf2 (ENSJJAG00000019165) #26	Hnrnpm (ENSJJAG00000017319) #27	Pram1 (ENSJJAG00000001822) #28	Zfp414 (ENSJJAG00000005188) #29	Myo1f (ENSJJAG00000006946) #30	Adamts10 (ENSJJAG00000010365) #31
Lesser Egyptian jerboa	MODERN SPECIES	133	Shroom1 (ENSJJAG00000019891)	Septin8 (ENSJJAG00000022205)	Kif3a (ENSJJAG00000023717)	ENSJJAG00000012514	Il13 (ENSJJAG00000000582)	ENSJJAG00000019622	ENSJJAG00000008274	Il5 (ENSJJAG00000023833)	ENSJJAG00000018240	ENSJJAG00000019858	Slc22a4 (ENSJJAG00000021594)	Pdlim4 (ENSJJAG00000015965)	P4ha2 (ENSJJAG00000023004)	Csf2 (ENSJJAG00000019419)	Acsl6 (ENSJJAG00000011523)	ENSJJAG00000009096 #22	Fnip1 (ENSJJAG00000023248)	Rapgef6 (ENSJJAG00000021502)	Cdc42se2 (ENSJJAG00000016990)	ENSJJAG00000021235	Gpx3 (ENSJJAG00000024418)	Tnip1 (ENSJJAG00000010474)	Anxa6 (ENSJJAG00000019090)	ENSJJAG00000000754	Gm2a (ENSJJAG00000017378)	Slc36a3 (ENSJJAG00000012424)	Slc36a2 (ENSJJAG00000022506)	Slc36a1 (ENSJJAG00000015295)	Fat2 (ENSJJAG00000019929)	Sparc (ENSJJAG00000003597)	Flt4 (ENSJJAG00000017737)
Muroidea	ANCESTRAL SPECIES	32														ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012.g #33	ENSGT00950000183069.b.b.a.b.c.a.b.b	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125
Upper Galilee mountains blind mole rat	MODERN SPECIES	1698	Wbp4 (ENSNGAG00000024369)	Kbtbd6 (ENSNGAG00000012119)	Kbtbd7 (ENSNGAG00000011545)	Mtrf1 (ENSNGAG00000014460)	Naa16 (ENSNGAG00000004140)	Rgcc (ENSNGAG00000022423)	Vwa8 (ENSNGAG00000010244)	Dgkh (ENSNGAG00000024075)	Akap11 (ENSNGAG00000010398)	Tnfsf11 (ENSNGAG00000023783)	ENSNGAG00000009242	Fam216b (ENSNGAG00000008030)	Epsti1 (ENSNGAG00000020070)	Dnajc15 (ENSNGAG00000012778)	Enox1 (ENSNGAG00000024175)	ENSNGAG00000010951 #22	Ccdc122 (ENSNGAG00000022365)	Lacc1 (ENSNGAG00000023659)
Muroidea_A	ANCESTRAL SPECIES	25														ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012.g #33	ENSGT00950000183069.b.b.a.b.c.a.b.b	ENSGT00390000018285.b	ENSGT00940000162163	ENSGT00940000161354
Cricetidae	ANCESTRAL SPECIES	25														ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000163012.g #33	ENSGT00950000183069.b.b.a.b.c.a.b.b	ENSGT00390000018285.b	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00940000161424	ENSGT00550000075024	ENSGT00530000063425.a.b	ENSGT00940000159118	ENSGT00390000006820	ENSGT00940000158817	ENSGT00940000163055	ENSGT00940000157364.C	ENSGT00940000158952	ENSGT00940000163749	ENSGT00900000143213	ENSGT00940000154292.a.b	ENSGT00860000135827	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000163012.g #33	ENSGT00950000183069.b.b.a.b.c.a.b.b	ENSGT00390000018285.b	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125
Chinese hamster chok1gshd	MODERN SPECIES	2	Ston1 (ENSCGRG00001014467)	Gtf2a1l (ENSCGRG00001015738)	Lhcgr (ENSCGRG00001019339)	ENSCGRG00001013067	Fshr (ENSCGRG00001014045)	ENSCGRG00001010857	ENSCGRG00001003809	ENSCGRG00001005913	ENSCGRG00001007291	Nrxn1 (ENSCGRG00001024322)	ENSCGRG00001012809	ENSCGRG00001014569	ENSCGRG00001014808	Cd320 (ENSCGRG00001016305) #20	Ndufa7 (ENSCGRG00001021655) #21	Rps28 (ENSCGRG00001022084) #22	Kank3 (ENSCGRG00001009872) #23	Angptl4 (ENSCGRG00001012499) #24	Rab11b (ENSCGRG00001013827)	Marchf2 (ENSCGRG00001014555) #26	ENSCGRG00001012021 #27	Pram1 (ENSCGRG00001016954) #28	Zfp414 (ENSCGRG00001019364) #29	Myo1f (ENSCGRG00001014051) #30	Adamts10 (ENSCGRG00001018715) #31	Actl9 (ENSCGRG00001008637) #33	ENSCGRG00001015185	Pot1b (ENSCGRG00001024775)	Adgre4 (ENSCGRG00001002286)	Adgre1 (ENSCGRG00001013011)	Vav1 (ENSCGRG00001017169)
Golden Hamster	MODERN SPECIES	730						ENSMAUG00000003588	ENSMAUG00000010637	ENSMAUG00000010504	ENSMAUG00000016648	ENSMAUG00000009040	ENSMAUG00000011549	ENSMAUG00000018269	ENSMAUG00000003574	Cd320 (ENSMAUG00000011368) #20	Ndufa7 (ENSMAUG00000011679) #21	Rps28 (ENSMAUG00000014417) #22	Kank3 (ENSMAUG00000009653) #23	Angptl4 (ENSMAUG00000014673) #24	Rab11b (ENSMAUG00000021579)	Marchf2 (ENSMAUG00000014822) #26	Hnrnpm (ENSMAUG00000017476) #27	Pram1 (ENSMAUG00000013923) #28	Zfp414 (ENSMAUG00000015759) #29	Myo1f (ENSMAUG00000002414) #30	Adamts10 (ENSMAUG00000012826) #31	Actl9 (ENSMAUG00000004280) #33	ENSMAUG00000017033	ENSMAUG00000012218	ENSMAUG00000017172	Pot1b (ENSMAUG00000020767)	Adgre4 (ENSMAUG00000008688)
Cricetidae_B	ANCESTRAL SPECIES	70														ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000163012.g #33	ENSGT00950000183069.b.b.a.b.c.a.b.b	ENSGT00390000018285.b	ENSGT00940000162163
Northern American deer mouse	MODERN SPECIES	14	Notch3 (ENSPEMG00000003368)	ENSPEMG00000026978	Ephx3 (ENSPEMG00000001114)	Brd4 (ENSPEMG00000015342)	Akap8 (ENSPEMG00000016622)	Akap8l (ENSPEMG00000008156)	ENSPEMG00000014668	Rasal3 (ENSPEMG00000008310)	Pglyrp2 (ENSPEMG00000007236)	ENSPEMG00000020195	ENSPEMG00000004681	ENSPEMG00000024877 #34	ENSPEMG00000025671	Cd320 (ENSPEMG00000016121) #20	Ndufa7 (ENSPEMG00000016851) #21	Rps28 (ENSPEMG00000015848) #22	Kank3 (ENSPEMG00000010286) #23	Angptl4 (ENSPEMG00000005356) #24	Rab11b (ENSPEMG00000014536)	Marchf2 (ENSPEMG00000018162) #26	Hnrnpm (ENSPEMG00000009260) #27	Pram1 (ENSPEMG00000011281) #28	Zfp414 (ENSPEMG00000013240) #29	Myo1f (ENSPEMG00000009368) #30	Adamts10 (ENSPEMG00000014710) #31	Actl9 (ENSPEMG00000006803) #33	ENSPEMG00000027971	ENSPEMG00000017715	ENSPEMG00000027880	ENSPEMG00000024414	ENSPEMG00000009140
Prairie vole	DUPLICATION
Prairie vole	DUPLICATION
Prairie vole	DUPLICATION
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	360	ENSMOCG00000023016	Kdm6a (ENSMOCG00000017535)	Dipk2b (ENSMOCG00000000808)	ENSMOCG00000001151	ENSMOCG00000010334	ENSMOCG00000020253	ENSMOCG00000010437	Chst7 (ENSMOCG00000008581)	Slc9a7 (ENSMOCG00000023006)	ENSMOCG00000018475	Rp2 (ENSMOCG00000016566)	ENSMOCG00000013860	ENSMOCG00000008729	Jade3 (ENSMOCG00000019995)	Rgn (ENSMOCG00000015014)	ENSMOCG00000010653 #22	Ndufb11 (ENSMOCG00000013805)	Rbm10 (ENSMOCG00000022485)	Uba1 (ENSMOCG00000016465)	ENSMOCG00000005167	Gpr143 (ENSMOCG00000012839)	Cldn34a (ENSMOCG00000006440)	Gpr173 (ENSMOCG00000000318)	Tspyl2 (ENSMOCG00000017617)	Kdm5c (ENSMOCG00000012222)	Iqsec2 (ENSMOCG00000014030)	Smc1a (ENSMOCG00000016110)	Ribc1 (ENSMOCG00000014134)	ENSMOCG00000000414	Huwe1 (ENSMOCG00000009594)	Phf8 (ENSMOCG00000014989)
Prairie vole	MODERN SPECIES	50																ENSMOCG00000007820 #22
Prairie vole	MODERN SPECIES	2					ENSMOCG00000020011	ENSMOCG00000021250	ENSMOCG00000000524	ENSMOCG00000009952	Glycam1 (ENSMOCG00000020429)	Ppp1r1a (ENSMOCG00000002557)	Pde1b (ENSMOCG00000008136)	ENSMOCG00000014544	ENSMOCG00000011883	Gtsf2 (ENSMOCG00000014770)	Gtsf1 (ENSMOCG00000018889)	ENSMOCG00000010096 #22	Itga5 (ENSMOCG00000021919)	Zfp385a (ENSMOCG00000006959)	ENSMOCG00000011736	Copz1 (ENSMOCG00000018095)	Nfe2 (ENSMOCG00000019128)	Hnrnpa1 (ENSMOCG00000004275)	ENSMOCG00000015075	Smug1 (ENSMOCG00000017727)	Hoxc4 (ENSMOCG00000014873)	Hoxc5 (ENSMOCG00000013422)	Hoxc6 (ENSMOCG00000018874)	Hoxc8 (ENSMOCG00000016249)	Hoxc9 (ENSMOCG00000019623)	Hoxc10 (ENSMOCG00000009084)	Hoxc11 (ENSMOCG00000010091)
Prairie vole	MODERN SPECIES	16	Kcnq1 (ENSMOCG00000016089)	Cdkn1c (ENSMOCG00000001521)	Slc22a18 (ENSMOCG00000021877)	Phlda2 (ENSMOCG00000017066)	Nap1l4 (ENSMOCG00000012976)	Cars (ENSMOCG00000020245)	ENSMOCG00000004531	ENSMOCG00000006021	Osbpl5 (ENSMOCG00000008055)	Mrgprg (ENSMOCG00000012347)	Nadsyn1 (ENSMOCG00000015097)	Dhcr7 (ENSMOCG00000011891)	Acte1 (ENSMOCG00000001514)	Shank2 (ENSMOCG00000005495)	Cttn (ENSMOCG00000016443)	ENSMOCG00000008235 #22	Ppfia1 (ENSMOCG00000006756)	Fadd (ENSMOCG00000021270)	Ano1 (ENSMOCG00000014655)	Fgf3 (ENSMOCG00000022933)	ENSMOCG00000003096	Fgf15 (ENSMOCG00000020351)	LTO1 (ENSMOCG00000011612)	Ccnd1 (ENSMOCG00000013593)	ENSMOCG00000021239	Tpcn2 (ENSMOCG00000013268)	Mrgprf (ENSMOCG00000005355)	Ighmbp2 (ENSMOCG00000018939)	Mrpl21 (ENSMOCG00000002555)	Cpt1a (ENSMOCG00000014661)	Tesmin (ENSMOCG00000003633)
Prairie vole	MODERN SPECIES	133							Or11n2 (ENSMOCG00000013107)	Igsf1 (ENSMOCG00000017036)	ENSMOCG00000007912	Arhgap36 (ENSMOCG00000012137)	Enox2 (ENSMOCG00000019573)	Fsip2l (ENSMOCG00000012662)	ENSMOCG00000000714	Gpr119 (ENSMOCG00000002591)	Slc25a14 (ENSMOCG00000013152)	ENSMOCG00000001023 #22	Agtr2 (ENSMOCG00000008234)	ENSMOCG00000002287	Slc6a14 (ENSMOCG00000011819)
Murinae	ANCESTRAL SPECIES	25														ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00910000144227.s.a.h.j.b #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012.g #33	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.a.b ##19	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.b.a ##19	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.b.b ##19
Rat	MODERN SPECIES	7	AABR07026291.1 (ENSRNOG00000014275)	Fnta (ENSRNOG00000014462)	Pomk (ENSRNOG00000014628)	Hgsnat (ENSRNOG00000069796)	Kcnu1 (ENSRNOG00000014741)	Ash2l (ENSRNOG00000014875)	Star (ENSRNOG00000015052)	Lsm1 (ENSRNOG00000015375)	Bag4 (ENSRNOG00000042560)	Ddhd2 (ENSRNOG00000015501)	Plpp5 (ENSRNOG00000069017)	Nsd3 (ENSRNOG00000015621)	Letm2 (ENSRNOG00000026180)	Fgfr1 (ENSRNOG00000016050)	H2az1-ps1 (ENSRNOG00000038375)	Rps28-ps1 (ENSRNOG00000049442) #22	Tacc1 (ENSRNOG00000016423)	Plekha2 (ENSRNOG00000066109)	Htra4 (ENSRNOG00000061160)	Tm2d2 (ENSRNOG00000016559)	Adam9 (ENSRNOG00000017231)	Adam32 (ENSRNOG00000025728)	Adam5 (ENSRNOG00000017518)	Adam3a (ENSRNOG00000017554)	Adam18 (ENSRNOG00000017683)	Ido1 (ENSRNOG00000031189)	Ido2 (ENSRNOG00000025365)	Zmat4 (ENSRNOG00000042690)	Sfrp1 (ENSRNOG00000017783)	Golga7 (ENSRNOG00000017956)	Gins4 (ENSRNOG00000018040)
Mus	ANCESTRAL SPECIES	16	ENSGT00940000160668	ENSGT00940000161022	ENSGT00980000198488.m.a.b.a.b.a.a.a.c	ENSGT00390000008815	ENSGT00390000012691.c.b.p	ENSGT00940000161798	ENSGT00390000007075	ENSGT00390000010512	ENSGT00940000161403	ENSGT00940000159200	ENSGT00940000160991	ENSGT00390000009448	ENSGT00920000150736	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012.g #33	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.a.b ##19	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.b.a ##19	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.b.b ##19	ENSGT01060000248581.A.b
Shrew mouse	MODERN SPECIES	9	Col11a2 (MGP_PahariEiJ_G0020438)	Rxrb (MGP_PahariEiJ_G0020437)	Slc39a7 (MGP_PahariEiJ_G0020436)	Hsd17b8 (MGP_PahariEiJ_G0020435)	Ring1 (MGP_PahariEiJ_G0020434)	MGP_PahariEiJ_G0020433	B3galt4 (MGP_PahariEiJ_G0020432)	Wdr46 (MGP_PahariEiJ_G0020431)	Pfdn6 (MGP_PahariEiJ_G0020430)	Rgl2 (MGP_PahariEiJ_G0020429)	Zbtb22 (MGP_PahariEiJ_G0020428)	Tapbp (MGP_PahariEiJ_G0020427)	Daxx (MGP_PahariEiJ_G0020426)	Cd320 (MGP_PahariEiJ_G0020425) #20	Ndufa7 (MGP_PahariEiJ_G0020424) #21	Rps28 (MGP_PahariEiJ_G0020423) #22	MGP_PahariEiJ_G0020422 #23	Angptl4 (MGP_PahariEiJ_G0020421) #24	Rab11b (MGP_PahariEiJ_G0020420)	Marchf2 (MGP_PahariEiJ_G0020419) #26	Hnrnpm (MGP_PahariEiJ_G0020418) #27	Pram1 (MGP_PahariEiJ_G0020417) #28	Zfp414 (MGP_PahariEiJ_G0020416) #29	Myo1f (MGP_PahariEiJ_G0020415) #30	Adamts10 (MGP_PahariEiJ_G0020414) #31	Actl9 (MGP_PahariEiJ_G0020413) #33	Zfp101 (MGP_PahariEiJ_G0020412) ##19	Zfp81 (MGP_PahariEiJ_G0020411) ##19	MGP_PahariEiJ_G0020410 ##19	Or10h28 (MGP_PahariEiJ_G0020409)	Morc2b (MGP_PahariEiJ_G0020408)
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000161022	ENSGT00980000198488.m.a.b.a.b.a.a.a.c.a.b.b.a.a.a	ENSGT00390000008815	ENSGT00390000012691.c.b.p	ENSGT00940000161798	ENSGT00390000007075	ENSGT00390000010512	ENSGT00940000161403	ENSGT00940000159200	ENSGT00940000160991	ENSGT00390000009448	ENSGT00920000150736	ENSGT00940000161735.l	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012.g #33	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.a.b ##19	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.b.a ##19	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.b.b ##19	ENSGT01060000248581.A.b
Ryukyu mouse	MODERN SPECIES	8	MGP_CAROLIEiJ_G0021434	MGP_CAROLIEiJ_G0021432	MGP_CAROLIEiJ_G0021431	MGP_CAROLIEiJ_G0021430	MGP_CAROLIEiJ_G0021429	Rps18 (MGP_CAROLIEiJ_G0021428)	B3galt4 (MGP_CAROLIEiJ_G0021427)	Wdr46 (MGP_CAROLIEiJ_G0021426)	Pfdn6 (MGP_CAROLIEiJ_G0021425)	Rgl2 (MGP_CAROLIEiJ_G0021424)	Zbtb22 (MGP_CAROLIEiJ_G0021423)	Tapbp (MGP_CAROLIEiJ_G0021422)	Daxx (MGP_CAROLIEiJ_G0021421)	Cd320 (MGP_CAROLIEiJ_G0021420) #20	Ndufa7 (MGP_CAROLIEiJ_G0021419) #21	Rps28 (MGP_CAROLIEiJ_G0021418) #22	Kank3 (MGP_CAROLIEiJ_G0021417) #23	Angptl4 (MGP_CAROLIEiJ_G0021416) #24	Rab11b (MGP_CAROLIEiJ_G0021415)	Marchf2 (MGP_CAROLIEiJ_G0021414) #26	Hnrnpm (MGP_CAROLIEiJ_G0021413) #27	Pram1 (MGP_CAROLIEiJ_G0021412) #28	Zfp414 (MGP_CAROLIEiJ_G0021411) #29	Myo1f (MGP_CAROLIEiJ_G0021410) #30	Adamts10 (MGP_CAROLIEiJ_G0021409) #31	Actl9 (MGP_CAROLIEiJ_G0021408) #33	Zfp101 (MGP_CAROLIEiJ_G0021407) ##19	Zfp81 (MGP_CAROLIEiJ_G0021406) ##19	Or10h28 (MGP_CAROLIEiJ_G0021405)	MGP_CAROLIEiJ_G0021404	MGP_CAROLIEiJ_G0021403
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000161022	ENSGT00980000198488.m.a.b.a.b.a.a.a.c.a.b.b.a.a.a	ENSGT00390000008815	ENSGT00390000012691.c.b.p	ENSGT00940000161798	ENSGT00390000007075	ENSGT00390000010512.`b	ENSGT00940000161403	ENSGT00940000159200	ENSGT00940000160991	ENSGT00390000009448	ENSGT00920000150736	ENSGT00940000161735.l	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012.g #33	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.a.b ##19	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.b.a ##19	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.b.b ##19	ENSGT01060000248581.A.b
Mouse	MODERN SPECIES	8	H2-K1 (ENSMUSG00000061232)	Vps52 (ENSMUSG00000024319)	Rps18 (ENSMUSG00000008668)	B3galt4 (ENSMUSG00000067370)	Wdr46 (ENSMUSG00000024312)	Pfdn6 (ENSMUSG00000024309)	Rgl2 (ENSMUSG00000041354)	Zbtb22 (ENSMUSG00000051390)	Tapbp (ENSMUSG00000024308)	Daxx (ENSMUSG00000002307)	Smim40 (ENSMUSG00000092349)	Kifc1 (ENSMUSG00000079553)	Smim40-ps (ENSMUSG00000115113)	Cd320 (ENSMUSG00000002308) #20	Ndufa7 (ENSMUSG00000041881) #21	Rps28 (ENSMUSG00000067288) #22	Kank3 (ENSMUSG00000042099) #23	Angptl4 (ENSMUSG00000002289) #24	Rab11b (ENSMUSG00000077450)	Marchf2 (ENSMUSG00000079557) #26	Hnrnpm (ENSMUSG00000059208) #27	Pram1 (ENSMUSG00000032739) #28	Zfp414 (ENSMUSG00000073423) #29	Myo1f (ENSMUSG00000024300) #30	Adamts10 (ENSMUSG00000024299) #31	Nfilz (ENSMUSG00000117495) #32	Actl9 (ENSMUSG00000092519) #33	Zfp101 (ENSMUSG00000055240) ##19	Zfp81 (ENSMUSG00000003929) ##19	Zfp955b (ENSMUSG00000096910) ##19	Or10h28 (ENSMUSG00000054666)
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000160668	ENSGT00940000161022	ENSGT00980000198488.m.a.b.a.b.a.a.a.c.a.a	ENSGT00390000008815	ENSGT00390000012691.c.b.p	ENSGT00940000161798	ENSGT00390000007075	ENSGT00390000010512.`b	ENSGT00940000161403	ENSGT00940000159200	ENSGT00940000160991	ENSGT00390000009448	ENSGT00920000150736	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h.k #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595.n #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000163012.g #33	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.a.b ##19	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.b.a ##19	ENSGT01060000248581.A.b	ENSGT00950000182755.b.a.a.b.a.b.b.b.a.a.b.b ##19	ENSGT00940000153998.b.j
spretus	MODERN SPECIES	8	Col11a2 (MGP_SPRETEiJ_G0022346)	Rxrb (MGP_SPRETEiJ_G0022345)	Slc39a7 (MGP_SPRETEiJ_G0022344)	Hsd17b8 (MGP_SPRETEiJ_G0022343)	Ring1 (MGP_SPRETEiJ_G0022342)	MGP_SPRETEiJ_G0022340	B3galt4 (MGP_SPRETEiJ_G0022339)	Wdr46 (MGP_SPRETEiJ_G0022338)	Pfdn6 (MGP_SPRETEiJ_G0022337)	Rgl2 (MGP_SPRETEiJ_G0022336)	Zbtb22 (MGP_SPRETEiJ_G0022335)	Tapbp (MGP_SPRETEiJ_G0022334)	Daxx (MGP_SPRETEiJ_G0022333)	Cd320 (MGP_SPRETEiJ_G0022332) #20	Ndufa7 (MGP_SPRETEiJ_G0022331) #21	Rps28 (MGP_SPRETEiJ_G0022330) #22	Kank3 (MGP_SPRETEiJ_G0022329) #23	Angptl4 (MGP_SPRETEiJ_G0022328) #24	Rab11b (MGP_SPRETEiJ_G0022327)	Marchf2 (MGP_SPRETEiJ_G0022326) #26	Hnrnpm (MGP_SPRETEiJ_G0022325) #27	Pram1 (MGP_SPRETEiJ_G0022324) #28	Zfp414 (MGP_SPRETEiJ_G0022323) #29	Myo1f (MGP_SPRETEiJ_G0022322) #30	Adamts10 (MGP_SPRETEiJ_G0022321) #31	Actl9 (MGP_SPRETEiJ_G0022320) #33	Zfp101 (MGP_SPRETEiJ_G0022319) ##19	Zfp81 (MGP_SPRETEiJ_G0022318) ##19	Or10h28 (MGP_SPRETEiJ_G0022317)	MGP_SPRETEiJ_G0022316 ##19	Morc2b (MGP_SPRETEiJ_G0022315)
Steppe mouse	MODERN SPECIES	2561														Cd320 (ENSMSIG00000009005) #20	ENSMSIG00000008978 #21	Rps28 (ENSMSIG00000008933) #22	Kank3 (ENSMSIG00000008884) #23	Angptl4 (ENSMSIG00000008875) #24	Rab11b (ENSMSIG00000008816)	Marchf2 (ENSMSIG00000008785) #26	Hnrnpm (ENSMSIG00000007742) #27	Pram1 (ENSMSIG00000007721) #28	Zfp414 (ENSMSIG00000007690) #29	Myo1f (ENSMSIG00000005839) #30	Adamts10 (ENSMSIG00000005736) #31	Actl9 (ENSMSIG00000005722) #33	Zfp101 (ENSMSIG00000005688) ##19	Zfp81 (ENSMSIG00000005665) ##19
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00960000190059	ENSGT00910000144227.t ##22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00960000190059	ENSGT00910000144227.s.b ##22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000162163
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00950000183005.b.c.a #36	ENSGT00440000039287 #37	ENSGT00940000163044	ENSGT00940000166764
Equus	ANCESTRAL SPECIES	34	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32
Donkey	MODERN SPECIES	12	ENSEASG00005003839	ENSEASG00005003835	EVI5L (ENSEASG00005003827)	ENSEASG00005034812	LRRC8E (ENSEASG00005003819)	MAP2K7 (ENSEASG00005025669)	ENSEASG00005029656	SNAPC2 (ENSEASG00005003809)	CTXN1 (ENSEASG00005003806)	TIMM44 (ENSEASG00005003802)	ELAVL1 (ENSEASG00005003790)	CCL25 (ENSEASG00005003785)	CERS4 (ENSEASG00005003733)	CD320 (ENSEASG00005003728) #20	ENSEASG00005032734 #21	RPS28 (ENSEASG00005003719) #22	KANK3 (ENSEASG00005032900) #23	ANGPTL4 (ENSEASG00005003697) #24	RAB11B (ENSEASG00005003708)	MARCHF2 (ENSEASG00005025812) #26	HNRNPM (ENSEASG00005022434) #27	PRAM1 (ENSEASG00005025992) #28	ZNF414 (ENSEASG00005022454) #29	MYO1F (ENSEASG00005022458) #30	ADAMTS10 (ENSEASG00005022481) #31	NFILZ (ENSEASG00005034919) #32	ENSEASG00005018314 #34	ENSEASG00005032689	ENSEASG00005033320	ENSEASG00005028663 ##36	ENSEASG00005036374
Chiroptera	ANCESTRAL SPECIES	31	ENSGT00960000189690	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125	ENSGT00940000154130.a.a.a	ENSGT00950000183047.c.a
Microchiroptera	ANCESTRAL SPECIES	30	ENSGT00960000189690	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125	ENSGT00940000154130.a.a.a	ENSGT00950000183047.c.a
Greater horseshoe bat	MODERN SPECIES	9	EVI5L (ENSRFEG00010011659)	PRR36 (ENSRFEG00010011799)	LRRC8E (ENSRFEG00010011841)	MAP2K7 (ENSRFEG00010011886)	TGFBR3L (ENSRFEG00010012012)	SNAPC2 (ENSRFEG00010012030)	CTXN1 (ENSRFEG00010012078)	TIMM44 (ENSRFEG00010012105)	ELAVL1 (ENSRFEG00010012172)	CCL25 (ENSRFEG00010012228)	ENSRFEG00010012244	ENSRFEG00010012272	CERS4 (ENSRFEG00010012440)	CD320 (ENSRFEG00010012574) #20	ENSRFEG00010012682 #21	RPS28 (ENSRFEG00010012761) #22	KANK3 (ENSRFEG00010012828) #23	ANGPTL4 (ENSRFEG00010012980) #24	RAB11B (ENSRFEG00010013186)	MARCHF2 (ENSRFEG00010013268) #26	ENSRFEG00010013395 #27	PRAM1 (ENSRFEG00010013477) #28	ZNF414 (ENSRFEG00010013523) #29	MYO1F (ENSRFEG00010013682) #30	ADAMTS10 (ENSRFEG00010013786) #31	ENSRFEG00010013846 #32	ENSRFEG00010010435	ADGRE1 (ENSRFEG00010011348)	VAV1 (ENSRFEG00010012766)	SH2D3A (ENSRFEG00010012944)	TRIP10 (ENSRFEG00010013094)
Microbat	MODERN SPECIES	1558												ENSMLUG00000029231	CERS4 (ENSMLUG00000003180)	CD320 (ENSMLUG00000003185) #20	NDUFA7 (ENSMLUG00000003194) #21	RPS28 (ENSMLUG00000023621) #22	KANK3 (ENSMLUG00000029771) #23	ANGPTL4 (ENSMLUG00000023180) #24	ENSMLUG00000006677 #25	MARCHF2 (ENSMLUG00000006686) #26	ENSMLUG00000006696 #27	PRAM1 (ENSMLUG00000006719) #28	ZNF414 (ENSMLUG00000006742) #29	MYO1F (ENSMLUG00000006755) #30	ADAMTS10 (ENSMLUG00000008143) #31
Carnivora	ANCESTRAL SPECIES	6	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000162163
Caniformia	ANCESTRAL SPECIES	4	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000162163	ENSGT00940000161354
Canidae	ANCESTRAL SPECIES		ENSGT00940000161836	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000162163	ENSGT00940000161354
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000161836	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528.i	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000162163	ENSGT00940000161354
Dog	MODERN SPECIES	12	CD209 (ENSCAFG00845028310)	EVI5L (ENSCAFG00845028558)	ENSCAFG00845028652	LRRC8E (ENSCAFG00845028670)	MAP2K7 (ENSCAFG00845028690)	SNAPC2 (ENSCAFG00845028803)	CTXN1 (ENSCAFG00845028842)	TIMM44 (ENSCAFG00845028877)	ENSCAFG00845028908	CCL25 (ENSCAFG00845028954)	FBN3 (ENSCAFG00845029156)	CERS4 (ENSCAFG00845029643)	ENSCAFG00845029681	ENSCAFG00845029699 #20	NDUFA7 (ENSCAFG00845029721) #21	RPS28 (ENSCAFG00845005920) #22	KANK3 (ENSCAFG00845005960) #23	ANGPTL4 (ENSCAFG00845006010) #24	RAB11B (ENSCAFG00845006072) #25	MARCHF2 (ENSCAFG00845006157) #26	HNRNPM (ENSCAFG00845006315) #27	PRAM1 (ENSCAFG00845006650) #28	ZNF414 (ENSCAFG00845006747) #29	MYO1F (ENSCAFG00845006824) #30	ADAMTS10 (ENSCAFG00845006935) #31	NFILZ (ENSCAFG00845007057) #32	ACTL9 (ENSCAFG00845007084) #33	OR2Z1 (ENSCAFG00845007117) #34	ENSCAFG00845007164 ##36	ENSCAFG00845007201	EMR4 (ENSCAFG00845007349)
Red fox	MODERN SPECIES	212	ENSVVUG00000027068	ENSVVUG00000027066	EVI5L (ENSVVUG00000027064)	PRR36 (ENSVVUG00000027061)	LRRC8E (ENSVVUG00000027058)	MAP2K7 (ENSVVUG00000027000)	SNAPC2 (ENSVVUG00000026998)	CTXN1 (ENSVVUG00000026995)	TIMM44 (ENSVVUG00000026990)	ENSVVUG00000026988	ENSVVUG00000026986	FBN3 (ENSVVUG00000025403)	CERS4 (ENSVVUG00000025222)	ENSVVUG00000025221 #20	NDUFA7 (ENSVVUG00000025219) #21	RPS28 (ENSVVUG00000025217) #22	KANK3 (ENSVVUG00000025212) #23	ANGPTL4 (ENSVVUG00000025211) #24	RAB11B (ENSVVUG00000025210)	MARCH2 (ENSVVUG00000025209) #26	HNRNPM (ENSVVUG00000024984) #27	PRAM1 (ENSVVUG00000024967) #28	ZNF414 (ENSVVUG00000024965) #29	MYO1F (ENSVVUG00000024835) #30	ENSVVUG00000024831 #30	ADAMTS10 (ENSVVUG00000024744) #31	ENSVVUG00000024730 #32	ACTL9 (ENSVVUG00000024729) #33	OR2Z1 (ENSVVUG00000024728) #34
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000162163	ENSGT00940000161354
Mustelinae	ANCESTRAL SPECIES	19	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125	ENSGT00940000154130.a.a.a.d
American mink	MODERN SPECIES	175	EVI5L (ENSNVIG00000017850)	ENSNVIG00000017824	LRRC8E (ENSNVIG00000017818)	MAP2K7 (ENSNVIG00000017772)	TGFBR3L (ENSNVIG00000017754)	SNAPC2 (ENSNVIG00000017737)	CTXN1 (ENSNVIG00000017726)	TIMM44 (ENSNVIG00000017687)	ELAVL1 (ENSNVIG00000017648)	ENSNVIG00000017604	FBN3 (ENSNVIG00000017398)	CERS4 (ENSNVIG00000017330)	ENSNVIG00000017324	CD320 (ENSNVIG00000017319) #20	NDUFA7 (ENSNVIG00000017312) #21	RPS28 (ENSNVIG00000017303) #22	KANK3 (ENSNVIG00000017288) #23	ANGPTL4 (ENSNVIG00000017269) #24	RAB11B (ENSNVIG00000017229)	MARH2 (ENSNVIG00000017185) #26	HNRNPM (ENSNVIG00000017104) #27	ZNF414 (ENSNVIG00000017053) #29	MYO1F (ENSNVIG00000016901) #30	ADAMTS10 (ENSNVIG00000016863) #31	ENSNVIG00000016819 ##36	ENSNVIG00000016802	ENSNVIG00000016792	ENSNVIG00000016773	ADGRE1 (ENSNVIG00000016424)	VAV1 (ENSNVIG00000016115)	SH2D3A (ENSNVIG00000016062)
Ursidae	ANCESTRAL SPECIES	20	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870.n #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000162163	ENSGT00940000161354
Giant Panda	MODERN SPECIES	14	CLEC4G (ENSAMEG00000008566)	ENSAMEG00000008580	EVI5L (ENSAMEG00000008589)	ENSAMEG00000030048	LRRC8E (ENSAMEG00000008598)	MAP2K7 (ENSAMEG00000008601)	TGFBR3L (ENSAMEG00000024560)	SNAPC2 (ENSAMEG00000024571)	TIMM44 (ENSAMEG00000008627)	ELAVL1 (ENSAMEG00000008657)	ENSAMEG00000025518	FBN3 (ENSAMEG00000008689)	CERS4 (ENSAMEG00000004854)	CD320 (ENSAMEG00000023536) #20	NDUFA7 (ENSAMEG00000004906) #21	RPS28 (ENSAMEG00000004917) #22	KANK3 (ENSAMEG00000004918) #23	ANGPTL4 (ENSAMEG00000030891) #24	RAB11B (ENSAMEG00000004955)	MARCHF2 (ENSAMEG00000004969) #26	HNRNPM (ENSAMEG00000004979) #27	PRAM1 (ENSAMEG00000030135) #28	ZNF414 (ENSAMEG00000005011) #29	MYO1F (ENSAMEG00000005023) #30	ADAMTS10 (ENSAMEG00000005088) #31	NFILZ (ENSAMEG00000027176) #32	ACTL9 (ENSAMEG00000018946) #33	ENSAMEG00000018965 #34	ENSAMEG00000018992 ##36	ENSAMEG00000003987	ADGRE1 (ENSAMEG00000003896)
Ursus	ANCESTRAL SPECIES	16	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00950000186147	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870.n #30	ENSGT00940000158404 #31	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125
American black bear	MODERN SPECIES	231													CERS4 (ENSUAMG00000022326)	CD320 (ENSUAMG00000022327) #20	NDUFA7 (ENSUAMG00000022328) #21	RPS28 (ENSUAMG00000022329) #22	KANK3 (ENSUAMG00000022330) #23
Felidae	ANCESTRAL SPECIES	21	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000162163
Cat	MODERN SPECIES	1	ENSFCAG00000023117	EVI5L (ENSFCAG00000019097)	PRR36 (ENSFCAG00000045070)	LRRC8E (ENSFCAG00000014942)	MAP2K7 (ENSFCAG00000014944)	TGFBR3L (ENSFCAG00000040407)	SNAPC2 (ENSFCAG00000014945)	CTXN1 (ENSFCAG00000026644)	TIMM44 (ENSFCAG00000014946)	ELAVL1 (ENSFCAG00000034143)	ENSFCAG00000046096	FBN3 (ENSFCAG00000014948)	CD320 (ENSFCAG00000002180) #20	CERS4 (ENSFCAG00000024070)	NDUFA7 (ENSFCAG00000015214) #21	RPS28 (ENSFCAG00000024931) #22	KANK3 (ENSFCAG00000024416) #23	ANGPTL4 (ENSFCAG00000015215) #24	RAB11B (ENSFCAG00000015216)	MARCHF2 (ENSFCAG00000015217) #26	HNRNPM (ENSFCAG00000015218) #27	ZNF414 (ENSFCAG00000015220) #28	MYO1F (ENSFCAG00000015221) #30	ADAMTS10 (ENSFCAG00000015222) #31	ENSFCAG00000048545 #32	ACTL9 (ENSFCAG00000027714) #33	OR2Z1 (ENSFCAG00000052785) #34	ENSFCAG00000000243	ADGRE1 (ENSFCAG00000005054)	VAV1 (ENSFCAG00000005052)	SH2D3A (ENSFCAG00000026188)
Panthera	ANCESTRAL SPECIES	15	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000162163
Tiger	MODERN SPECIES	332	PCP2 (ENSPTIG00000016978)	STXBP2 (ENSPTIG00000013956)	ENSPTIG00000011676	TRAPPC5 (ENSPTIG00000011386)	CLEC4G (ENSPTIG00000010368)	ENSPTIG00000010025	EVI5L (ENSPTIG00000020212)	LRRC8E (ENSPTIG00000019015)	MAP2K7 (ENSPTIG00000016520)	SNAPC2 (ENSPTIG00000016014)	TIMM44 (ENSPTIG00000014893)	ELAVL1 (ENSPTIG00000013602)	ENSPTIG00000015986	ENSPTIG00000015497 #20	NDUFA7 (ENSPTIG00000015048) #21	ENSPTIG00000014735 #22	ENSPTIG00000013659 #23	ANGPTL4 (ENSPTIG00000013109) #24	ENSPTIG00000012555 #25	ENSPTIG00000011939	MARCHF2 (ENSPTIG00000011536) #26	HNRNPM (ENSPTIG00000003024) #27	PRAM1 (ENSPTIG00000021389) #28	ENSPTIG00000020119 #29	MYO1F (ENSPTIG00000015928) #30	ENSPTIG00000008136 ##36	ENSPTIG00000020462	ADGRE1 (ENSPTIG00000019039)
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36	ENSGT00940000162163	ENSGT00940000161354
lion	MODERN SPECIES	2	ENSPLOG00000001611	ENSPLOG00000001596	EVI5L (ENSPLOG00000001498)	LRRC8E (ENSPLOG00000001451)	MAP2K7 (ENSPLOG00000001428)	TGFBR3L (ENSPLOG00000001412)	SNAPC2 (ENSPLOG00000001397)	CTXN1 (ENSPLOG00000001383)	TIMM44 (ENSPLOG00000001371)	ELAVL1 (ENSPLOG00000001337)	ENSPLOG00000001302	FBN3 (ENSPLOG00000001105)	CERS4 (ENSPLOG00000000936)	CD320 (ENSPLOG00000000884) #20	NDUFA7 (ENSPLOG00000000859) #21	RPS28 (ENSPLOG00000000846) #22	KANK3 (ENSPLOG00000000830) #23	ANGPTL4 (ENSPLOG00000000798) #24	RAB11B (ENSPLOG00000000764)	MARCHF2 (ENSPLOG00000000740) #26	HNRNPM (ENSPLOG00000000698) #27	ZNF414 (ENSPLOG00000000611) #29	MYO1F (ENSPLOG00000000563) #30	ADAMTS10 (ENSPLOG00000000533) #31	NFILZ (ENSPLOG00000000510) #32	ACTL9 (ENSPLOG00000000500) #33	OR2Z1 (ENSPLOG00000000490) #34	ENSPLOG00000000477 ##36	ENSPLOG00000000398	ADGRE1 (ENSPLOG00000000168)	VAV1 (ENSPLOG00000000054)
leopard	MODERN SPECIES	110	FCER2 (ENSPPRG00000012302)	CLEC4G (ENSPPRG00000010388)	ENSPPRG00000010164	ENSPPRG00000009102	EVI5L (ENSPPRG00000008780)	PRR36 (ENSPPRG00000005576)	LRRC8E (ENSPPRG00000004190)	MAP2K7 (ENSPPRG00000004029)	TGFBR3L (ENSPPRG00000003390)	SNAPC2 (ENSPPRG00000003265)	CTXN1 (ENSPPRG00000015168)	TIMM44 (ENSPPRG00000003024)	ELAVL1 (ENSPPRG00000002521)	CERS4 (ENSPPRG00000011929)	NDUFA7 (ENSPPRG00000011600) #21	RPS28 (ENSPPRG00000011146) #22	KANK3 (ENSPPRG00000011100) #23	ANGPTL4 (ENSPPRG00000010336) #24	RAB11B (ENSPPRG00000010160)	MARCHF2 (ENSPPRG00000009920) #26	HNRNPM (ENSPPRG00000009284) #27	PRAM1 (ENSPPRG00000007623) #28	ZNF414 (ENSPPRG00000006391) #29	MYO1F (ENSPPRG00000004883) #30	ADAMTS10 (ENSPPRG00000003456) #31	ACTL9 (ENSPPRG00000014868) #33	ENSPPRG00000000829	ADGRE1 (ENSPPRG00000000199)
Artiodactyla	ANCESTRAL SPECIES	23	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00960000190059	ENSGT00910000144227.s.b ##22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36
Artiodactyla_a	ANCESTRAL SPECIES	24	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00960000190059	ENSGT00910000144227.s.b ##22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00950000183005.b.c.b ##36
Camelidae	ANCESTRAL SPECIES	61	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147
Arabian camel	MODERN SPECIES	14	EVI5L (ENSCDRG00005014180)	PRR36 (ENSCDRG00005014132)	LRRC8E (ENSCDRG00005014110)	MAP2K7 (ENSCDRG00005013675)	TGFBR3L (ENSCDRG00005013598)	SNAPC2 (ENSCDRG00005013517)	CTXN1 (ENSCDRG00005013495)	TIMM44 (ENSCDRG00005013430)	ELAVL1 (ENSCDRG00005013355)	CCL25 (ENSCDRG00005013296)	FBN3 (ENSCDRG00005011636)	CERS4 (ENSCDRG00005011543)	ENSCDRG00005011484	CD320 (ENSCDRG00005011455) #20	NDUFA7 (ENSCDRG00005011397) #21	RPS28 (ENSCDRG00005011369) #22	KANK3 (ENSCDRG00005011269) #23	ANGPTL4 (ENSCDRG00005011142) #24	RAB11B (ENSCDRG00005011000)	MARCHF2 (ENSCDRG00005010915) #26	HNRNPM (ENSCDRG00005010751) #27	PRAM1 (ENSCDRG00005010701) #28	ZNF414 (ENSCDRG00005010644) #29	MYO1F (ENSCDRG00005008914) #30	ADAMTS10 (ENSCDRG00005014083) #31	ACTL9 (ENSCDRG00005014023) #33	OR2Z1 (ENSCDRG00005013991) #34	ZNF558 (ENSCDRG00005013914) #35	ENSCDRG00005013882 ##19	ENSCDRG00005013818	ENSCDRG00005013776
Artiodactyla_b	ANCESTRAL SPECIES	25	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00960000190059	ENSGT00910000144227.s.b ##22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000160844 #35
Pecora	ANCESTRAL SPECIES		ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000154431.e.a.a.a.a	ENSGT00940000154431.e.a.a.a.b	ENSGT00950000183005.b.c.b.ab ##36
Yarkand deer	MODERN SPECIES	32	ENSCHYG00000007834	EVI5L (ENSCHYG00000007964)	PRR36 (ENSCHYG00000008468)	LRRC8E (ENSCHYG00000008493)	MAP2K7 (ENSCHYG00000008515)	TGFBR3L (ENSCHYG00000008745)	SNAPC2 (ENSCHYG00000008785)	CTXN1 (ENSCHYG00000008900)	TIMM44 (ENSCHYG00000008941)	ELAVL1 (ENSCHYG00000009131)	ENSCHYG00000009260	FBN3 (ENSCHYG00000009392)	CERS4 (ENSCHYG00000010722)	ENSCHYG00000010861 #20	NDUFA7 (ENSCHYG00000010918) #21	RPS28 (ENSCHYG00000010962) #22	KANK3 (ENSCHYG00000011010) #23	ANGPTL4 (ENSCHYG00000011094) #24	RAB11B (ENSCHYG00000011222)	MARCHF2 (ENSCHYG00000011284) #26	HNRNPM (ENSCHYG00000011387) #27	ENSCHYG00000011848 #28	ZNF414 (ENSCHYG00000011878) #29	MYO1F (ENSCHYG00000012026) #30	ADAMTS10 (ENSCHYG00000012363) #31	NFILZ (ENSCHYG00000012650) #32	ACTL9 (ENSCHYG00000012673) #33	OR2Z1 (ENSCHYG00000012698) #34	ENSCHYG00000012730	ENSCHYG00000012744	ENSCHYG00000012759 ##36
Percora_a	ANCESTRAL SPECIES		ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000154431.e.a.a.a.a	ENSGT00940000154431.e.a.a.a.b	ENSGT00950000183005.b.c.b.ab ##36
Siberian musk deer	MODERN SPECIES	99	ENSMMSG00000002797	EVI5L (ENSMMSG00000002831)	ENSMMSG00000002878	LRRC8E (ENSMMSG00000002889)	MAP2K7 (ENSMMSG00000002907)	TGFBR3L (ENSMMSG00000002965)	SNAPC2 (ENSMMSG00000002987)	CTXN1 (ENSMMSG00000002999)	TIMM44 (ENSMMSG00000003023)	ELAVL1 (ENSMMSG00000003085)	CCL25 (ENSMMSG00000003113)	FBN3 (ENSMMSG00000003200)	CERS4 (ENSMMSG00000003402)	ENSMMSG00000003437 #20	NDUFA7 (ENSMMSG00000003447) #21	RPS28 (ENSMMSG00000003457) #22	KANK3 (ENSMMSG00000003473) #23	ANGPTL4 (ENSMMSG00000003494) #24	RAB11B (ENSMMSG00000003516)	MARCHF2 (ENSMMSG00000003527) #26	ENSMMSG00000003560 #27	ZNF414 (ENSMMSG00000003602) #29	MYO1F (ENSMMSG00000003634) #30	ADAMTS10 (ENSMMSG00000003662) #31	ACTL9 (ENSMMSG00000003682) #33	OR2Z1 (ENSMMSG00000003688) #34	ENSMMSG00000003695	ENSMMSG00000003703	ENSMMSG00000003728 ##36	ENSMMSG00000006263	ENSMMSG00000006306
Bovidae	ANCESTRAL SPECIES		ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000154431.e.a.a.a.a	ENSGT00940000154431.e.a.a.a.b	ENSGT00950000183005.b.c.b.ab ##36
Caprinae	ANCESTRAL SPECIES	3	ENSGT00940000161836	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051.e	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000154431.e.a.a.a.a.a.b	ENSGT00940000154431.e.a.a.a.b	ENSGT00940000162163	ENSGT00940000161354
Rambouillet Sheep	MODERN SPECIES	21	ENSOARG00020009935	ENSOARG00020010029	EVI5L (ENSOARG00020010122)	LRRC8E (ENSOARG00020010408)	MAP2K7 (ENSOARG00020010429)	TGFBR3L (ENSOARG00020010674)	SNAPC2 (ENSOARG00020010765)	CTXN1 (ENSOARG00020010824)	TIMM44 (ENSOARG00020010857)	ELAVL1 (ENSOARG00020010922)	CCL25 (ENSOARG00020011002)	FBN3 (ENSOARG00020011123)	CERS4 (ENSOARG00020012847)	ENSOARG00020012973 #20	NDUFA7 (ENSOARG00020013027) #21	RPS28 (ENSOARG00020013105) #22	KANK3 (ENSOARG00020013158) #23	ANGPTL4 (ENSOARG00020013214) #24	RAB11B (ENSOARG00020013395)	ENSOARG00020013505 #26	HNRNPM (ENSOARG00020013599) #27	ZNF414 (ENSOARG00020013759) #29	MYO1F (ENSOARG00020013845) #30	ADAMTS10 (ENSOARG00020014322) #31	ACTL9 (ENSOARG00020014551) #33	OR2Z1 (ENSOARG00020014568) #34	ENSOARG00020014583	ENSOARG00020014632	ENSOARG00020014669	ENSOARG00020014729	ENSOARG00020014890
Goat	MODERN SPECIES	26	TRAPPC5 (ENSCHIG00000002183)	FCER2 (ENSCHIG00000014931)	CLEC4G (ENSCHIG00000025064)	ENSCHIG00000011063	EVI5L (ENSCHIG00000009385)	LRRC8E (ENSCHIG00000020260)	MAP2K7 (ENSCHIG00000021476)	CTXN1 (ENSCHIG00000008271)	ENSCHIG00000024164	ELAVL1 (ENSCHIG00000014334)	CCL25 (ENSCHIG00000026192)	FBN3 (ENSCHIG00000012166)	CERS4 (ENSCHIG00000006098)	ENSCHIG00000021021 #20	NDUFA7 (ENSCHIG00000009187) #21	RPS28 (ENSCHIG00000017787) #22	KANK3 (ENSCHIG00000012453) #23	ANGPTL4 (ENSCHIG00000023643) #24	ENSCHIG00000022426 #25	ENSCHIG00000016628 #26	HNRNPM (ENSCHIG00000026313) #27	PRAM1 (ENSCHIG00000006566) #28	ZNF414 (ENSCHIG00000003887) #29	MYO1F (ENSCHIG00000015009) #30	ADAMTS10 (ENSCHIG00000025021) #31	ACTL9 (ENSCHIG00000009183) #33	OR2Z1 (ENSCHIG00000009977) #34	ENSCHIG00000015823	ENSCHIG00000015838	ENSCHIG00000022235	ENSCHIG00000026329
Bovinae	ANCESTRAL SPECIES	2	ENSGT00940000161836	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000154431.e.a.a.a.a	ENSGT00940000154431.e.a.a.a.b	ENSGT00950000183005.b.c.b.ab ##36
Bos	ANCESTRAL SPECIES	3	ENSGT00940000161836	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000154431.e.a.a.a.a	ENSGT00940000154431.e.a.a.a.b	ENSGT00950000183005.b.c.b.ab ##36
Bos_b	ANCESTRAL SPECIES	2	ENSGT00940000162574	ENSGT00940000161836	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00390000017407	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000154431.e.a.a.a.a	ENSGT00940000154431.e.a.a.a.b	ENSGT00390000018316.b.b.h
Cow	MODERN SPECIES	26	FCER2 (ENSBTAG00000004270)	CLEC4G (ENSBTAG00000013429)	CD209 (ENSBTAG00000007312)	EVI5L (ENSBTAG00000004294)	PRR36 (ENSBTAG00000044018)	LRRC8E (ENSBTAG00000004300)	MAP2K7 (ENSBTAG00000010639)	SNAPC2 (ENSBTAG00000014926)	TIMM44 (ENSBTAG00000015567)	ELAVL1 (ENSBTAG00000000613)	CCL25 (ENSBTAG00000005581)	FBN3 (ENSBTAG00000000595)	CERS4 (ENSBTAG00000003434)	CD320 (ENSBTAG00000004403) #20	NDUFA7 (ENSBTAG00000052280) #21	RPS28 (ENSBTAG00000002468) #22	KANK3 (ENSBTAG00000002469) #23	ANGPTL4 (ENSBTAG00000002473) #24	RAB11B (ENSBTAG00000002475) #25	MARCHF2 (ENSBTAG00000021036) #26	HNRNPM (ENSBTAG00000021039) #27	PRAM1 (ENSBTAG00000021041) #28	ZNF414 (ENSBTAG00000007660) #29	MYO1F (ENSBTAG00000007661) #30	ADAMTS10 (ENSBTAG00000014207) #31	ACTL9 (ENSBTAG00000011255) #33	OR2Z1 (ENSBTAG00000051841) #34	ENSBTAG00000054873	ENSBTAG00000053612	ENSBTAG00000052571	ENSBTAG00000049797
Bos_a	ANCESTRAL SPECIES	2	ENSGT00390000000976	ENSGT00940000162574	ENSGT00940000161836	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00910000144227.s.a.h #22	ENSGT00390000006553 #21	ENSGT00910000144227.s.b ##22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000154431.e.a.a.a.a
Wild yak	MODERN SPECIES	346											ELAVL1 (ENSBMUG00000025875)	ENSBMUG00000025871	FBN3 (ENSBMUG00000025855)	CERS4 (ENSBMUG00000025834)	ENSBMUG00000025817 #20	ENSBMUG00000025808 #22	NDUFA7 (ENSBMUG00000025804) #21	KANK3 (ENSBMUG00000025802) #23	ANGPTL4 (ENSBMUG00000025787) #24	ENSBMUG00000025784	MARCHF2 (ENSBMUG00000025779) #26	HNRNPM (ENSBMUG00000025771) #27	PRAM1 (ENSBMUG00000025757) #28	ZNF414 (ENSBMUG00000025755) #29	MYO1F (ENSBMUG00000025738) #30	ADAMTS10 (ENSBMUG00000025711) #31	ACTL9 (ENSBMUG00000025640) #33	OR2Z1 (ENSBMUG00000025633) #34	ENSBMUG00000025627	ENSBMUG00000025621 ##36	ENSBMUG00000025618
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT00390000007888.d.i.a	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00960000190059	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00940000160844.c #35	ENSGT00940000156425	ENSGT00940000163210
Blue whale	MODERN SPECIES	14	ENSBMSG00010000327	EVI5L (ENSBMSG00010000214)	LRRC8E (ENSBMSG00010000166)	MAP2K7 (ENSBMSG00010000122)	TGFBR3L (ENSBMSG00010000083)	SNAPC2 (ENSBMSG00010000068)	CTXN1 (ENSBMSG00010013911)	TIMM44 (ENSBMSG00010013825)	ELAVL1 (ENSBMSG00010013783)	CCL25 (ENSBMSG00010013764)	FBN3 (ENSBMSG00010013523)	ENSBMSG00010013439	CERS4 (ENSBMSG00010013405)	CD320 (ENSBMSG00010013391) #20	NDUFA7 (ENSBMSG00010013384) #21	RPS28 (ENSBMSG00010013372) #22	ENSBMSG00010013362	KANK3 (ENSBMSG00010013350) #23	ANGPTL4 (ENSBMSG00010013227) #24	RAB11B (ENSBMSG00010013204)	MARCHF2 (ENSBMSG00010013179) #26	HNRNPM (ENSBMSG00010013163) #27	ZNF414 (ENSBMSG00010013078) #29	MYO1F (ENSBMSG00010012965) #30	ADAMTS10 (ENSBMSG00010012896) #31	ACTL9 (ENSBMSG00010012871) #33	ENSBMSG00010012848 #35	ENSBMSG00010012830	ZNF699 (ENSBMSG00010012815)	ZNF177 (ENSBMSG00010012776)	ENSBMSG00010012749
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT00390000007888.d.i.a	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00940000160844.c #35	ENSGT00940000156425	ENSGT00940000163210	ENSGT00940000164004
Sperm whale	MODERN SPECIES	129												ENSPCTG00005013664	CERS4 (ENSPCTG00005013547)	CD320 (ENSPCTG00005013509) #20	NDUFA7 (ENSPCTG00005013436) #21	RPS28 (ENSPCTG00005013385) #22	ENSPCTG00005013299 #23
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT00390000007888.d.i.a	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00940000160844.c #35	ENSGT00940000156425	ENSGT00940000163210	ENSGT00940000164004
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT00390000007888.d.i.a	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00940000160844.c #35	ENSGT00940000156425	ENSGT00940000163210	ENSGT00940000163463
Vaquita	MODERN SPECIES	14	ENSPSNG00000009724	TRAPPC5 (ENSPSNG00000009905)	CLEC4G (ENSPSNG00000009956)	EVI5L (ENSPSNG00000010109)	LRRC8E (ENSPSNG00000010205)	MAP2K7 (ENSPSNG00000010242)	TGFBR3L (ENSPSNG00000010343)	SNAPC2 (ENSPSNG00000010426)	TIMM44 (ENSPSNG00000010469)	ELAVL1 (ENSPSNG00000010542)	CCL25 (ENSPSNG00000010606)	FBN3 (ENSPSNG00000010787)	CERS4 (ENSPSNG00000012139)	CD320 (ENSPSNG00000012230) #20	NDUFA7 (ENSPSNG00000012251) #21	RPS28 (ENSPSNG00000012286) #22	ANGPTL4 (ENSPSNG00000012876) #24	RAB11B (ENSPSNG00000013038)	MARCHF2 (ENSPSNG00000013117) #26	HNRNPM (ENSPSNG00000013194) #27	PRAM1 (ENSPSNG00000013286) #28	ZNF414 (ENSPSNG00000013396) #29	MYO1F (ENSPSNG00000013483) #30	ADAMTS10 (ENSPSNG00000014228) #31	NFILZ (ENSPSNG00000014433) #32	ACTL9 (ENSPSNG00000014452) #33	ENSPSNG00000014500 #35	ENSPSNG00000014650	ZNF699 (ENSPSNG00000015586)	ENSPSNG00000015654	ENSPSNG00000015869
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT00390000007888.d.i.a	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000163012 #33	ENSGT00940000160844.c #35	ENSGT00940000156425	ENSGT00940000163210	ENSGT00940000163463	ENSGT00390000003354
Narwhal	MODERN SPECIES	298	ENSMMNG00015018843	EVI5L (ENSMMNG00015018889)	LRRC8E (ENSMMNG00015018942)	MAP2K7 (ENSMMNG00015018984)	TGFBR3L (ENSMMNG00015019042)	SNAPC2 (ENSMMNG00015019070)	CTXN1 (ENSMMNG00015019111)	TIMM44 (ENSMMNG00015019128)	ELAVL1 (ENSMMNG00015019178)	CCL25 (ENSMMNG00015019210)	FBN3 (ENSMMNG00015019425)	ENSMMNG00015019781	CERS4 (ENSMMNG00015019809)	CD320 (ENSMMNG00015019864) #20	NDUFA7 (ENSMMNG00015019887) #21	RPS28 (ENSMMNG00015019912) #22	KANK3 (ENSMMNG00015019936) #23	ANGPTL4 (ENSMMNG00015019994) #24	RAB11B (ENSMMNG00015020044)	MARCHF2 (ENSMMNG00015020080) #26	HNRNPM (ENSMMNG00015020142) #27	PRAM1 (ENSMMNG00015020241) #28	ZNF414 (ENSMMNG00015020270) #29	MYO1F (ENSMMNG00015020312) #30	ADAMTS10 (ENSMMNG00015020451) #31	ACTL9 (ENSMMNG00015020513) #33	ENSMMNG00015020529 #35	ENSMMNG00015020570	ZNF699 (ENSMMNG00015020612)	ENSMMNG00015020652	FBXL12 (ENSMMNG00015020707)
Beluga whale	MODERN SPECIES	62	CLEC4G (ENSDLEG00000016910)	CD209 (ENSDLEG00000016903)	EVI5L (ENSDLEG00000016858)	LRRC8E (ENSDLEG00000016842)	MAP2K7 (ENSDLEG00000016809)	TGFBR3L (ENSDLEG00000016788)	SNAPC2 (ENSDLEG00000016775)	CTXN1 (ENSDLEG00000016768)	TIMM44 (ENSDLEG00000016738)	ELAVL1 (ENSDLEG00000016728)	CCL25 (ENSDLEG00000016722)	FBN3 (ENSDLEG00000014671)	CERS4 (ENSDLEG00000014299)	ENSDLEG00000014271 #20	NDUFA7 (ENSDLEG00000014266) #21	RPS28 (ENSDLEG00000014249) #22	KANK3 (ENSDLEG00000014113) #23	ANGPTL4 (ENSDLEG00000014044) #24	ENSDLEG00000013992 #25	MARCH2 (ENSDLEG00000013953) #26	HNRNPM (ENSDLEG00000013836) #27	PRAM1 (ENSDLEG00000013796) #28	ZNF414 (ENSDLEG00000013766) #29	MYO1F (ENSDLEG00000012681) #30	ADAMTS10 (ENSDLEG00000012334) #31	ACTL9 (ENSDLEG00000012304) #33	ENSDLEG00000012289 #35	ENSDLEG00000012286	ZNF699 (ENSDLEG00000012279)	ENSDLEG00000012219	FBXL12 (ENSDLEG00000012204)
Suina	ANCESTRAL SPECIES	16	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.h #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT01090000260018.B.a.b #34	ENSGT00940000154431.f.e.a	ENSGT00940000160844 #35	ENSGT00950000183069.b
Chacoan peccary	MODERN SPECIES	770	ENSCWAG00000014957	EVI5L (ENSCWAG00000015041)	LRRC8E (ENSCWAG00000015188)	MAP2K7 (ENSCWAG00000015216)	TGFBR3L (ENSCWAG00000015286)	SNAPC2 (ENSCWAG00000015331)	CTXN1 (ENSCWAG00000015364)	TIMM44 (ENSCWAG00000015383)	ELAVL1 (ENSCWAG00000015443)	CCL25 (ENSCWAG00000015510)	FBN3 (ENSCWAG00000015622)	ENSCWAG00000016379	CERS4 (ENSCWAG00000016403)	CD320 (ENSCWAG00000016478) #20	NDUFA7 (ENSCWAG00000016503) #21	RPS28 (ENSCWAG00000016528) #22	KANK3 (ENSCWAG00000016576) #23	ANGPTL4 (ENSCWAG00000016767) #24	RAB11B (ENSCWAG00000016886)	MARCHF2 (ENSCWAG00000016943) #26	HNRNPM (ENSCWAG00000017001) #27	ZNF414 (ENSCWAG00000017051) #29	MYO1F (ENSCWAG00000017093) #30	ADAMTS10 (ENSCWAG00000017445) #31	ZNF558 (ENSCWAG00000017577) #35	ENSCWAG00000017601 #32	ACTL9 (ENSCWAG00000017641) #33	ENSCWAG00000017657	ENSCWAG00000017698 ##19	ACP5 (ENSCWAG00000017740)	ELOF1 (ENSCWAG00000017768)
Pig	MODERN SPECIES	10	EVI5L (ENSSSCG00000013585)	ENSSSCG00000013584	LRRC8E (ENSSSCG00000013586)	MAP2K7 (ENSSSCG00000013588)	TGFBR3L (ENSSSCG00000040598)	SNAPC2 (ENSSSCG00000013589)	CTXN1 (ENSSSCG00000036220)	TIMM44 (ENSSSCG00000013591)	ELAVL1 (ENSSSCG00000013592)	CCL25 (ENSSSCG00000013593)	FBN3 (ENSSSCG00000013594)	ENSSSCG00000063352	CERS4 (ENSSSCG00000013595)	CD320 (ENSSSCG00000032833) #20	NDUFA7 (ENSSSCG00000041220) #21	RPS28 (ENSSSCG00000013597) #22	KANK3 (ENSSSCG00000013598) #23	ANGPTL4 (ENSSSCG00000013599) #24	RAB11B (ENSSSCG00000013600) #25	MARCHF2 (ENSSSCG00000013601) #26	HNRNPM (ENSSSCG00000013602) #27	PRAM1 (ENSSSCG00000060035) #28	ZNF414 (ENSSSCG00000024810) #29	MYO1F (ENSSSCG00000013604) #30	ADAMTS10 (ENSSSCG00000026994) #31	NFILZ (ENSSSCG00000055667) #32	ACTL9 (ENSSSCG00000013605) #33	OR2Z1 (ENSSSCG00000013606) #34	ENSSSCG00000013607	ZNF558 (ENSSSCG00000029035) #35	ENSSSCG00000013609
Boreoeutheria	DUPLICATION
Boreoeutheria	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.a ##22
Laurasiatheria	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.a ##22
Laurasiatheria_a	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.a ##22
Artiodactyla	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.a ##22
Artiodactyla_a	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.a ##22
Artiodactyla_b	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.a ##22
Pecora	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.a ##22
Percora_a	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.a ##22
Bovidae	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.a ##22
Bovinae	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.a ##22
Bos	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.a ##22
Bos_a	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.a ##22
Wild yak	MODERN SPECIES	1672								DLEU7 (ENSBMUG00000002147)	KCNRG (ENSBMUG00000002009)	TRIM13 (ENSBMUG00000001991)	SPRYD7 (ENSBMUG00000001977)	KPNA3 (ENSBMUG00000001936)	ENSBMUG00000001911	ARL11 (ENSBMUG00000001893)	RCBTB1 (ENSBMUG00000001872)	ENSBMUG00000001830 ##22	PHF11 (ENSBMUG00000001807)	SETDB2 (ENSBMUG00000001741)	ENSBMUG00000001712	CAB39L (ENSBMUG00000001694)	CDADC1 (ENSBMUG00000001665)	MLNR (ENSBMUG00000001633)	FNDC3A (ENSBMUG00000001611)	ENSBMUG00000001545	ENSBMUG00000001537	RCBTB2 (ENSBMUG00000001512)	LPAR6 (ENSBMUG00000001452)	RB1 (ENSBMUG00000001429)	ENSBMUG00000001373	ZNF34 (ENSBMUG00000001352)	C8orf33 (ENSBMUG00000001339)
Yarkand deer	MODERN SPECIES	6	SFRP5 (ENSCHYG00000004868)	ZFYVE27 (ENSCHYG00000004712)	MARVELD1 (ENSCHYG00000004459)	AVPI1 (ENSCHYG00000004424)	PI4K2A (ENSCHYG00000021371)	MORN4 (ENSCHYG00000021303)	HOGA1 (ENSCHYG00000021197)	ANKRD2 (ENSCHYG00000020741)	UBTD1 (ENSCHYG00000020651)	MMS19 (ENSCHYG00000020307)	ZDHHC16 (ENSCHYG00000019968)	ENSCHYG00000019703	PGAM1 (ENSCHYG00000019647)	RRP12 (ENSCHYG00000018769)	ENSCHYG00000018643	ENSCHYG00000018613 ##22	FRAT2 (ENSCHYG00000018576)	FRAT1 (ENSCHYG00000018557)	ARHGAP19 (ENSCHYG00000018209)	ENSCHYG00000018017	SLIT1 (ENSCHYG00000017383)	LCOR (ENSCHYG00000017121)	PIK3AP1 (ENSCHYG00000016886)	TM9SF3 (ENSCHYG00000016672)	TLL2 (ENSCHYG00000016501)	OPALIN (ENSCHYG00000016188)	DNTT (ENSCHYG00000015940)	BLNK (ENSCHYG00000015608)	ZNF518A (ENSCHYG00000015551)	CCNJ (ENSCHYG00000015424)	CC2D2B (ENSCHYG00000014593)
Boreoeutheria	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Laurasiatheria	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Laurasiatheria_a	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Artiodactyla	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Artiodactyla_a	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Artiodactyla_b	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Pecora	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Yarkand deer	MODERN SPECIES	11	PCNX3 (ENSCHYG00000004406)	MAP3K11 (ENSCHYG00000004371)	KCNK7 (ENSCHYG00000004345)	EHBP1L1 (ENSCHYG00000004123)	FAM89B (ENSCHYG00000004077)	ZNRD2 (ENSCHYG00000004064)	LTBP3 (ENSCHYG00000003945)	SCYL1 (ENSCHYG00000003862)	ENSCHYG00000003838	FRMD8 (ENSCHYG00000003743)	SLC25A45 (ENSCHYG00000003656)	TIGD3 (ENSCHYG00000003639)	DPF2 (ENSCHYG00000003588)	CDC42EP2 (ENSCHYG00000003563)	POLA2 (ENSCHYG00000003526)	ENSCHYG00000003507 ##22	ENSCHYG00000003498	CAPN1 (ENSCHYG00000003439)	ENSCHYG00000003409	ENSCHYG00000003397	SYVN1 (ENSCHYG00000003375)	MRPL49 (ENSCHYG00000003355)	ENSCHYG00000003316	ZNHIT2 (ENSCHYG00000003301)	TM7SF2 (ENSCHYG00000003242)	VPS51 (ENSCHYG00000003179)	TMEM262 (ENSCHYG00000003156)	ZFPL1 (ENSCHYG00000003140)	CDCA5 (ENSCHYG00000003127)	NAALADL1 (ENSCHYG00000003035)	SAC3D1 (ENSCHYG00000002999)
Euarchontoglires	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Euarchontoglires_A	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Glires	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Rodentia	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Rodentia_B	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Myomorpha	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Muroidea	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Muroidea_A	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Cricetidae	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Cricetidae_B	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.g.b ##22
Prairie vole	MODERN SPECIES	15	ENSMOCG00000014798	Trim47 (ENSMOCG00000017116)	Wbp2 (ENSMOCG00000015478)	Unc13d (ENSMOCG00000012654)	Unk (ENSMOCG00000021657)	ENSMOCG00000013773	Galk1 (ENSMOCG00000016831)	Itgb4 (ENSMOCG00000018829)	Sap30bp (ENSMOCG00000011898)	Recql5 (ENSMOCG00000019642)	Myo15b (ENSMOCG00000013403)	Llgl2 (ENSMOCG00000016380)	Tsen54 (ENSMOCG00000021585)	ENSMOCG00000015226	Tmem94 (ENSMOCG00000014527)	ENSMOCG00000002602 ##22	Grb2 (ENSMOCG00000017537)	ENSMOCG00000013006	Mif4gd (ENSMOCG00000010287)	Mrps7 (ENSMOCG00000005519)	Gga3 (ENSMOCG00000003209)	Nup85 (ENSMOCG00000018333)	ENSMOCG00000022080	ENSMOCG00000012165	Nt5c (ENSMOCG00000019361)	Armc7 (ENSMOCG00000013951)	Slc16a5 (ENSMOCG00000010701)	Trim80 (ENSMOCG00000021797)	Kctd2 (ENSMOCG00000012062)	Atp5h (ENSMOCG00000015015)	Mrpl58 (ENSMOCG00000015630)
Atlantogenata	ANCESTRAL SPECIES	95	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659.d	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31
Xenarthra	ANCESTRAL SPECIES	390													ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659.d	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158404 #31
Armadillo	MODERN SPECIES	1178												ENSDNOG00000039283	CERS4 (ENSDNOG00000005364)	CD320 (ENSDNOG00000018248) #20	ENSDNOG00000033615 #21	RPS28 (ENSDNOG00000038487) #22	KANK3 (ENSDNOG00000011656) #23	ANGPTL4 (ENSDNOG00000036696) #24	ENSDNOG00000014618	MARCHF2 (ENSDNOG00000035885) #26	HNRNPM (ENSDNOG00000012157) #27	PRAM1 (ENSDNOG00000012184) #28	ZNF414 (ENSDNOG00000025224) #29	ADAMTS10 (ENSDNOG00000000872) #31
Afrotheria	ANCESTRAL SPECIES	96	ENSGT00940000155012	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659.d	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT01090000260018.B.a.b #34
Afrotheria_a	ANCESTRAL SPECIES	98	ENSGT00940000155012	ENSGT00940000162906.c.b	ENSGT00940000153846.a.b	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT00940000158914	ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b	ENSGT00730000111436 #20	ENSGT00390000006553 #21	ENSGT00910000144227.s.a #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000161659.d	ENSGT00940000158995 #26	ENSGT00940000154595 #27	ENSGT00530000063460.B #28	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT01090000260018.B.a.b #34
Elephant	MODERN SPECIES	37	ENSLAFG00000005594	ENSLAFG00000026544	EVI5L (ENSLAFG00000004779)	ENSLAFG00000023073	LRRC8E (ENSLAFG00000002159)	MAP2K7 (ENSLAFG00000005010)	SNAPC2 (ENSLAFG00000023323)	CTXN1 (ENSLAFG00000018067)	TIMM44 (ENSLAFG00000030514)	ELAVL1 (ENSLAFG00000004219)	ENSLAFG00000022991	FBN3 (ENSLAFG00000029310)	CERS4 (ENSLAFG00000012414)	ENSLAFG00000014131 #20	NDUFA7 (ENSLAFG00000018390) #21	RPS28 (ENSLAFG00000029923) #22	ENSLAFG00000014137 #23	ANGPTL4 (ENSLAFG00000005770) #24	RAB11B (ENSLAFG00000013598)	MARCHF2 (ENSLAFG00000013602) #26	HNRNPM (ENSLAFG00000013603) #27	PRAM1 (ENSLAFG00000025890) #28	ZNF414 (ENSLAFG00000021907) #29	MYO1F (ENSLAFG00000011461) #30	ADAMTS10 (ENSLAFG00000011470) #31	OR2Z1 (ENSLAFG00000004122) #34	ENSLAFG00000028595
Marsupialia	ANCESTRAL SPECIES	16				ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT00940000166621	ENSGT01100000263557.A.b.a.a.a.a	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b.e.a.b	ENSGT01030000234515.a.b.b.e.b.a.b	ENSGT01030000234515.a.b.b.e.b.a.a	ENSGT01030000234515.a.b.b.f	ENSGT00390000006553 #21	ENSGT00910000144227.s.a #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.eb #27	ENSGT00950000182907.b	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000159185	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00530000063861.a	ENSGT00940000158914	ENSGT00940000159311.c
Opossum	DUPLICATION
Opossum	MODERN SPECIES	2	TIMM44 (ENSMODG00000005061)	ELAVL1 (ENSMODG00000005041)	ENSMODG00000043426	ENSMODG00000028064	FBN3 (ENSMODG00000005011)	ENSMODG00000004916	ENSMODG00000047978	ENSMODG00000004875	ENSMODG00000004533	ENSMODG00000038212	ENSMODG00000029681	ENSMODG00000025633	ENSMODG00000004320	ENSMODG00000037072	ENSMODG00000050183 #21	ENSMODG00000003890 #22	KANK3 (ENSMODG00000003881) #23	ANGPTL4 (ENSMODG00000049909) #24	ENSMODG00000003841 #25	MARCHF2 (ENSMODG00000003824) #26	ENSMODG00000003801 #27	ENSMODG00000003629	ENSMODG00000037452 #29	MYO1F (ENSMODG00000003610) #30	ENSMODG00000003530 #31	ENSMODG00000037358 #31	ZAP70 (ENSMODG00000003486)	PLPP2 (ENSMODG00000006556)	MIER2 (ENSMODG00000006643)	ENSMODG00000022854	C2CD4C (ENSMODG00000006608)
Opossum	MODERN SPECIES	7	ENSMODG00000039811	ENSMODG00000005766	ENSMODG00000005805	ENSMODG00000025451	MIOX (ENSMODG00000045265)	ENSMODG00000028248	TYMP (ENSMODG00000005926)	ODF3B (ENSMODG00000005939)	ENSMODG00000047615	SYCE3 (ENSMODG00000036594)	CPT1B (ENSMODG00000006015)	CHKB (ENSMODG00000006034)	MAPK8IP2 (ENSMODG00000006050)	ARSA (ENSMODG00000006070)	SHANK3 (ENSMODG00000006106)	ENSMODG00000025356 #22	SHISAL1 (ENSMODG00000006110)	PARVG (ENSMODG00000006126)	PARVB (ENSMODG00000047252)	SAMM50 (ENSMODG00000006205)	PNPLA3 (ENSMODG00000006216)	SULT4A1 (ENSMODG00000006239)	SCUBE1 (ENSMODG00000006256)	ENSMODG00000006758	ENSMODG00000051483	ENSMODG00000006774	ENSMODG00000036841	TTLL12 (ENSMODG00000006790)	ENSMODG00000006802	MCAT (ENSMODG00000006812)	TTLL1 (ENSMODG00000006847)
Marsupialia_b	ANCESTRAL SPECIES	17		ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT00940000166621	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b.e.a.b	ENSGT01030000234515.a.b.b.e.b.a.b	ENSGT01030000234515.a.b.b.e.b.a.a.c	ENSGT01030000234515.a.b.b.e.b.b	ENSGT01030000234515.a.b.b.f	ENSGT00940000165170	ENSGT00390000006553 #21	ENSGT00910000144227.s.a #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.db.b #27	ENSGT00940000154595.eb #27	ENSGT00530000063460.B #28	ENSGT00950000182907.b	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000159185	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00530000063861.a
Diprotodontia	ANCESTRAL SPECIES	55			ENSGT00390000017407	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT00940000166621	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b.e.a.b	ENSGT01030000234515.a.b.b.e.b.a.b	ENSGT01030000234515.a.b.b.e.b.b	ENSGT01030000234515.a.b.b.f	ENSGT00940000165170	ENSGT00390000006553 #21	ENSGT00910000144227.s.a #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.db.b #27	ENSGT00530000063460.B #28	ENSGT00950000182907.b	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000159185	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00940000158914	ENSGT00940000159311.c
Diprotodontia_a	DUPLICATION
Diprotodontia_a	ANCESTRAL SPECIES	51	ENSGT00940000154412.C	ENSGT00390000000051	ENSGT00940000155528	ENSGT00940000166621	ENSGT01010000222539	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b.e.a.b	ENSGT01030000234515.a.b.b.e.b.a.b	ENSGT01030000234515.a.b.b.e.a.a	ENSGT01030000234515.a.b.b.e.b.a.a.c	ENSGT01030000234515.a.b.b.e.b.a.a.d	ENSGT01030000234515.a.b.b.e.b.b	ENSGT01030000234515.a.b.b.f	ENSGT00940000165170	ENSGT00390000006553 #21	ENSGT00910000144227.s.a.e #22	ENSGT00940000161178 #23	ENSGT00940000159478 #24	ENSGT00940000163126 #25	ENSGT00940000158995 #26	ENSGT00940000154595.db.b #27	ENSGT00530000063460.B #28	ENSGT00950000182907.b	ENSGT00390000006876 #29	ENSGT00940000158870 #30	ENSGT00940000158404 #31	ENSGT00940000159185	ENSGT00940000164108.b #32	ENSGT00940000163012 #33	ENSGT00940000158914	ENSGT00940000159311.c
koala	DUPLICATION
koala	MODERN SPECIES	330	CTXN1 (ENSPCIG00000024985)	TIMM44 (ENSPCIG00000024984)	ENSPCIG00000023516	ENSPCIG00000023515	FBN3 (ENSPCIG00000020814)	ENSPCIG00000020799	ENSPCIG00000020796	ENSPCIG00000015691	ENSPCIG00000020545	ENSPCIG00000020541	ENSPCIG00000020528	ENSPCIG00000020526	ENSPCIG00000020523	ENSPCIG00000020521	ENSPCIG00000020517 #21	ENSPCIG00000020515 #22	ENSPCIG00000034480 #23	ENSPCIG00000020513 #23	ANGPTL4 (ENSPCIG00000020509) #24	ENSPCIG00000020371 #25	MARCHF2 (ENSPCIG00000020366) #26	HNRNPM (ENSPCIG00000020115) #27	ENSPCIG00000020108 #28	ENSPCIG00000020107	ENSPCIG00000020105 #29	MYO1F (ENSPCIG00000020103) #30	ENSPCIG00000031301 #30	ADAMTS10 (ENSPCIG00000019816) #31	ZAP70 (ENSPCIG00000019809)	ENSPCIG00000019808 #32	ACTL9 (ENSPCIG00000019807) #33
koala	MODERN SPECIES	197														POSTN (ENSPCIG00000018838)	TRPC4 (ENSPCIG00000004362)	ENSPCIG00000004578 #22	UFM1 (ENSPCIG00000030753)	FREM2 (ENSPCIG00000037129)	STOML3 (ENSPCIG00000021472)	PROSER1 (ENSPCIG00000021474)	NHLRC3 (ENSPCIG00000021476)	COG6 (ENSPCIG00000024515)	ENSPCIG00000023187	ENSPCIG00000035813	ENSPCIG00000023178	FOXO1 (ENSPCIG00000023175)	MRPS31 (ENSPCIG00000023173)	SLC25A15 (ENSPCIG00000037032)	ENSPCIG00000007124	THSD1 (ENSPCIG00000007135)	VPS36 (ENSPCIG00000007138)
Common wonbat	MODERN SPECIES	1126		ENSVURG00010024495	CTXN1 (ENSVURG00010024497)	ENSVURG00010024502	ELAVL1 (ENSVURG00010024505)	ENSVURG00010024507	FBN3 (ENSVURG00010024556)	ENSVURG00010024695	ENSVURG00010024699	ENSVURG00010024700	ENSVURG00010024704	ENSVURG00010024707	ENSVURG00010024712	ENSVURG00010024715	ENSVURG00010024717 #21	ENSVURG00010024719 #22	KANK3 (ENSVURG00010024723) #23	ANGPTL4 (ENSVURG00010024725) #24	ENSVURG00010024728 #25	MARCHF2 (ENSVURG00010024730) #26	HNRNPM (ENSVURG00010024736) #27	ENSVURG00010024740 #28	ENSVURG00010024745	ENSVURG00010024748 #29	MYO1F (ENSVURG00010024751) #30	ENSVURG00010024757 #31	ENSVURG00010024762 #31	ZAP70 (ENSVURG00010024765)	ACTL9 (ENSVURG00010024771) #33	MAP2K7 (ENSVURG00010024777)	LRRC8E (ENSVURG00010024781)
Diprotodontia_a	ANCESTRAL SPECIES																	ENSGT00910000144227.s.a.f #22
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1056	ENSVURG00010014716	ENSVURG00010014706	ENSVURG00010014699	ENSVURG00010014697	ENSVURG00010014687	ENSVURG00010014682	ENSVURG00010014676	ENSVURG00010014672	RAMP3 (ENSVURG00010014658)	ENSVURG00010014641	ADCY1 (ENSVURG00010014608)	ENSVURG00010014589	IGFBP3 (ENSVURG00010014581)	TNS3 (ENSVURG00010014482)	HUS1 (ENSVURG00010014440)	ENSVURG00010014433 #22	SUN3 (ENSVURG00010014409)	C7orf57 (ENSVURG00010014388)	UPP1 (ENSVURG00010014378)	ABCA13 (ENSVURG00010014224)	ENSVURG00010014180	VWC2 (ENSVURG00010014168)	ENSVURG00010014161	ENSVURG00010014152	IKZF1 (ENSVURG00010014069)	FIGNL1 (ENSVURG00010014050)	DDC (ENSVURG00010014009)	COBL (ENSVURG00010013771)	ENSVURG00010013728	ENSVURG00010013718	VSTM2A (ENSVURG00010013700)
Common wonbat	MODERN SPECIES	256	ATP7A (ENSVURG00010005745)	ENSVURG00010005765	ENSVURG00010005813	ENSVURG00010006043	CYSLTR1 (ENSVURG00010010720)	ENSVURG00010010723	LPAR4 (ENSVURG00010010729)	P2RY10 (ENSVURG00010010733)	ENSVURG00010010739	ENSVURG00010010742	ITM2A (ENSVURG00010010753)	ENSVURG00010010796	TBX22 (ENSVURG00010010806)	ENSVURG00010010827	TENT5D (ENSVURG00010010847)	ENSVURG00010010850 #22	BRWD3 (ENSVURG00010010949)	ENSVURG00010012917	SH3BGRL (ENSVURG00010012931)	ENSVURG00010012935	ENSVURG00010012938	ENSVURG00010012946	POU3F4 (ENSVURG00010012952)	RPS6KA6 (ENSVURG00010012986)	HDX (ENSVURG00010012997)	ENSVURG00010013008	ENSVURG00010013025	ENSVURG00010013030	APOOL (ENSVURG00010013044)	ENSVURG00010013055	ENSVURG00010013087
koala	MODERN SPECIES	131																ENSPCIG00000026023 #22	ENSPCIG00000026022	DNAH5 (ENSPCIG00000024266)	ENSPCIG00000002846	ENSPCIG00000014044	ENSPCIG00000031853	OTULINL (ENSPCIG00000014039)	OTULIN (ENSPCIG00000014035)	ANKH (ENSPCIG00000024004)	ENSPCIG00000024000	FBXL7 (ENSPCIG00000004033)	MARCHF11 (ENSPCIG00000003964)	ZNF622 (ENSPCIG00000025058)	RETREG1 (ENSPCIG00000025061)	MYO10 (ENSPCIG00000027061)	ENSPCIG00000027066
Tasmanian devil	MODERN SPECIES		ENSSHAG00000000907	ENSSHAG00000002010	ENSSHAG00000004998	ENSSHAG00000030676 #37	ENSSHAG00000026987	ENSSHAG00000022882	ENSSHAG00000007438	ENSSHAG00000028488	FBN3 (ENSSHAG00000005977)	ENSSHAG00000029219	ENSSHAG00000001747	ENSSHAG00000001540	ENSSHAG00000003870	ENSSHAG00000008548	ENSSHAG00000027876	RPS28 (ENSSHAG00000022170) #22	ENSSHAG00000008037 #23	ANGPTL4 (ENSSHAG00000007289) #24	ENSSHAG00000006816 #25	MARCHF2 (ENSSHAG00000027201) #26	HNRNPM (ENSSHAG00000005864) #27	ENSSHAG00000026011 #28	ENSSHAG00000005528	ENSSHAG00000022999 #29	MYO1F (ENSSHAG00000003887) #30	ADAMTS10 (ENSSHAG00000002176) #31	ENSSHAG00000004075	ENSSHAG00000027862 #33	ENSSHAG00000026426	MAP2K7 (ENSSHAG00000001994)	LRRC8E (ENSSHAG00000029646)