Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000155048 #22
Gnathostomata	ANCESTRAL SPECIES	45										ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d #26	ENSGT00940000173126	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Euteleostomi	ANCESTRAL SPECIES	9	ENSGT00940000157660 #7	ENSGT00940000156286 #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a ##26	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000173126	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35
Sarcopterygii	ANCESTRAL SPECIES	6	ENSGT00940000157660 #7	ENSGT00940000156286 #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000173126	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Tetrapoda	ANCESTRAL SPECIES	14	ENSGT00940000157660 #7	ENSGT00940000156286 #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Amniota	ANCESTRAL SPECIES	22	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00630000090979	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Mammalia	ANCESTRAL SPECIES	18	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00630000090979	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Theria	ANCESTRAL SPECIES	28	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Eutheria	ANCESTRAL SPECIES	14	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Primates	ANCESTRAL SPECIES	1	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Haplorrhini	ANCESTRAL SPECIES	5	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00910000146882	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00860000135738	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00910000146882
Hominidae	ANCESTRAL SPECIES	2	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00860000135738	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00910000146882
Orangutan	MODERN SPECIES	16	SLMAP (ENSPPYG00000013766) #7	FLNB (ENSPPYG00000013765) #8	DNASE1L3 (ENSPPYG00000013764) #9	ABHD6 (ENSPPYG00000013763) #10	ENSPPYG00000039120 #11	RPP14 (ENSPPYG00000013762) #12	PXK (ENSPPYG00000013761) #13	PDHB (ENSPPYG00000013760) #14	KCTD6 (ENSPPYG00000013759) #15	ACOX2 (ENSPPYG00000013758) #16	ENSPPYG00000025893 #17	FAM107A (ENSPPYG00000035448) #18	FAM3D (ENSPPYG00000013756) #19	CFAP20DC (ENSPPYG00000013754) #20	FHIT (ENSPPYG00000013753) #21	PTPRG (ENSPPYG00000013752) #22	C3orf14 (ENSPPYG00000013751) #23	FEZF2 (ENSPPYG00000013750) #24	CADPS (ENSPPYG00000013749) #25	SYNPR (ENSPPYG00000013748) #26	SNTN (ENSPPYG00000013747) #27	C3orf49 (ENSPPYG00000013745) #28	THOC7 (ENSPPYG00000013746) #29	ATXN7 (ENSPPYG00000013744) #30	PSMD6 (ENSPPYG00000013743) #31	PRICKLE2 (ENSPPYG00000013741) #32	ADAMTS9 (ENSPPYG00000013740) #33	MAGI1 (ENSPPYG00000013739) #34	SLC25A26 (ENSPPYG00000013738) #35	LRIG1 (ENSPPYG00000013737) #36	KBTBD8 (ENSPPYG00000038565) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00940000156464.p	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00860000135738	ENSGT00390000007888.d	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33
Gorilla	MODERN SPECIES	16	DENND6A (ENSGGOG00000034949)	SLMAP (ENSGGOG00000034879) #7	FLNB (ENSGGOG00000010039) #8	DNASE1L3 (ENSGGOG00000010072) #9	ABHD6 (ENSGGOG00000015826) #10	RPP14 (ENSGGOG00000016164)	HTD2 (ENSGGOG00000040783) #12	PXK (ENSGGOG00000015022) #13	PDHB (ENSGGOG00000013150) #14	KCTD6 (ENSGGOG00000010706) #15	ACOX2 (ENSGGOG00000015441) #16	FAM107A (ENSGGOG00000015452) #18	FAM3D (ENSGGOG00000015448) #19	CFAP20DC (ENSGGOG00000034942) #20	FHIT (ENSGGOG00000042949) #21	PTPRG (ENSGGOG00000006858) #22	ENSGGOG00000026144	ENSGGOG00000022395	C3orf14 (ENSGGOG00000043774) #23	ENSGGOG00000026200 #24	ENSGGOG00000015194	ENSGGOG00000042564	ENSGGOG00000037389	SYNPR (ENSGGOG00000002513) #26	SNTN (ENSGGOG00000012870) #27	C3orf49 (ENSGGOG00000012760) #28	THOC7 (ENSGGOG00000024282) #29	ATXN7 (ENSGGOG00000012900) #30	PSMD6 (ENSGGOG00000004430) #31	PRICKLE2 (ENSGGOG00000006935) #32	ADAMTS9 (ENSGGOG00000015540) #33
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00940000156464.p	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00860000135738	ENSGT00390000007888.d	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33
Pan	ANCESTRAL SPECIES	2	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155143.x	ENSGT00390000004428.a.g.b.c.a.a	ENSGT00940000155048 #22	ENSGT00940000156464.p	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00860000135738	ENSGT00390000007888.d	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34
Bonobo	MODERN SPECIES	16	DNASE1L3 (ENSPPAG00000042704) #9	ABHD6 (ENSPPAG00000039614) #10	RPP14 (ENSPPAG00000041153)	HTD2 (ENSPPAG00000036591) #12	PXK (ENSPPAG00000027245) #13	PDHB (ENSPPAG00000028933) #14	KCTD6 (ENSPPAG00000031362) #15	ACOX2 (ENSPPAG00000029182) #16	FAM107A (ENSPPAG00000043565) #18	FAM3D (ENSPPAG00000033729) #19	CFAP20DC (ENSPPAG00000037900) #20	ENSPPAG00000004830	ENSPPAG00000037040	ENSPPAG00000034829	ENSPPAG00000015559	PTPRG (ENSPPAG00000036859) #22	ENSPPAG00000027644	ENSPPAG00000005174	C3orf14 (ENSPPAG00000033418) #23	FEZF2 (ENSPPAG00000039379) #24	ENSPPAG00000037095	ENSPPAG00000033241	ENSPPAG00000034871	SYNPR (ENSPPAG00000037002) #26	ENSPPAG00000014773 #27	C3orf49 (ENSPPAG00000044092) #28	THOC7 (ENSPPAG00000044086) #29	ATXN7 (ENSPPAG00000038542) #30	PSMD6 (ENSPPAG00000008985) #31	PRICKLE2 (ENSPPAG00000036788) #32	ADAMTS9 (ENSPPAG00000027506) #33
Chimpanzee	MODERN SPECIES	16	DNASE1L3 (ENSPTRG00000015055) #9	ABHD6 (ENSPTRG00000015056) #10	RPP14 (ENSPTRG00000048740)	HTD2 (ENSPTRG00000040419) #12	PXK (ENSPTRG00000015058) #13	PDHB (ENSPTRG00000015059) #14	KCTD6 (ENSPTRG00000015060) #15	ACOX2 (ENSPTRG00000015061) #16	FAM107A (ENSPTRG00000015062) #18	FAM3D (ENSPTRG00000022801) #19	CFAP20DC (ENSPTRG00000015064) #20	ENSPTRG00000034348	FHIT (ENSPTRG00000015065) #21	ENSPTRG00000043102	ENSPTRG00000047476	PTPRG (ENSPTRG00000015067) #22	ENSPTRG00000051643	ENSPTRG00000038955	C3H3orf14 (ENSPTRG00000015070) #23	FEZF2 (ENSPTRG00000015071) #24	CADPS (ENSPTRG00000015072)	ENSPTRG00000052322	ENSPTRG00000051485	SYNPR (ENSPTRG00000015073) #26	SNTN (ENSPTRG00000015074) #27	C3H3orf49 (ENSPTRG00000015075) #28	THOC7 (ENSPTRG00000015076) #29	ATXN7 (ENSPTRG00000015077) #30	PSMD6 (ENSPTRG00000015078) #31	PRICKLE2 (ENSPTRG00000015081) #32	ADAMTS9 (ENSPTRG00000015082) #33
Human	MODERN SPECIES	15	DENND6A (ENSG00000174839)	SLMAP (ENSG00000163681) #7	FLNB (ENSG00000136068) #8	DNASE1L3 (ENSG00000163687) #9	ABHD6 (ENSG00000163686) #10	RPP14 (ENSG00000163684)	HTD2 (ENSG00000255154) #12	PXK (ENSG00000168297) #13	PDHB (ENSG00000168291) #14	KCTD6 (ENSG00000168301) #15	ACOX2 (ENSG00000168306) #16	FAM107A (ENSG00000168309) #18	FAM3D (ENSG00000198643) #19	CFAP20DC (ENSG00000163689) #20	FHIT (ENSG00000189283) #21	PTPRG (ENSG00000144724) #22	C3orf14 (ENSG00000114405) #23	FEZF2 (ENSG00000153266) #24	CADPS (ENSG00000163618) #25	SYNPR (ENSG00000163630) #26	SNTN (ENSG00000188817) #27	C3orf49 (ENSG00000163632) #28	THOC7 (ENSG00000163634) #29	ATXN7 (ENSG00000163635) #30	PSMD6 (ENSG00000163636) #31	PRICKLE2 (ENSG00000163637) #32	ADAMTS9 (ENSG00000163638) #33	MAGI1 (ENSG00000151276) #34	SLC25A26 (ENSG00000144741) #35	LRIG1 (ENSG00000144749) #36	KBTBD8 (ENSG00000163376) #37
Gibbon	MODERN SPECIES	13	SLC25A22 (ENSNLEG00000008571)	PIDD1 (ENSNLEG00000008607)	RPLP2 (ENSNLEG00000026860)	PNPLA2 (ENSNLEG00000008626)	CRACR2B (ENSNLEG00000008653)	CD151 (ENSNLEG00000008676)	POLR2L (ENSNLEG00000008683)	TSPAN4 (ENSNLEG00000008694)	CHID1 (ENSNLEG00000008713)	AP2A2 (ENSNLEG00000008801)	ENSNLEG00000008814	ENSNLEG00000029945	ENSNLEG00000011598 #20	FHIT (ENSNLEG00000033239) #21	ENSNLEG00000033060	PTPRG (ENSNLEG00000011625) #22	C3orf14 (ENSNLEG00000011656) #23	FEZF2 (ENSNLEG00000033287) #24	ENSNLEG00000011669	ENSNLEG00000027146	SYNPR (ENSNLEG00000011741) #26	ENSNLEG00000011755 #27	C3orf49 (ENSNLEG00000011759) #28	THOC7 (ENSNLEG00000011760) #29	ATXN7 (ENSNLEG00000011772) #30	PSMD6 (ENSNLEG00000011805) #31	PRICKLE2 (ENSNLEG00000011847) #32	ENSNLEG00000032900	ADAMTS9 (ENSNLEG00000011854) #33	MAGI1 (ENSNLEG00000011916) #34	ENSNLEG00000030874
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497.p #20	ENSGT00510000047967 #21	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00910000148224	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00910000146882	ENSGT00550000074950 #35
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497.p #20	ENSGT00510000047967 #21	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00910000148224	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00910000146882	ENSGT00550000074950 #35
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497.p #20	ENSGT00510000047967 #21	ENSGT00390000000153.l.a.cb.h.b	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00910000148224	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00910000146882	ENSGT00550000074950 #35
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000018085.a.a.a.a	ENSGT00390000005497.o.a #20	ENSGT00510000047967 #21	ENSGT00390000000153.l.a.cb.h.b	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00910000146882	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Olive baboon	MODERN SPECIES	11	ABHD6 (ENSPANG00000015059) #10	RPP14 (ENSPANG00000006374)	PXK (ENSPANG00000001127) #13	PDHB (ENSPANG00000019216) #14	KCTD6 (ENSPANG00000032615) #15	ACOX2 (ENSPANG00000005667) #16	FAM107A (ENSPANG00000020595) #18	FAM3D (ENSPANG00000031785) #19	ENSPANG00000049946	ENSPANG00000015061 #20	ENSPANG00000045192	ENSPANG00000044281 #20	FHIT (ENSPANG00000018461) #21	ENSPANG00000037541	ENSPANG00000041030	PTPRG (ENSPANG00000005383) #22	C3orf14 (ENSPANG00000020596) #23	FEZF2 (ENSPANG00000015063) #24	ENSPANG00000042442	ENSPANG00000015659	SYNPR (ENSPANG00000021872) #26	ENSPANG00000041214 #27	C3orf49 (ENSPANG00000011418) #28	THOC7 (ENSPANG00000009531) #29	ATXN7 (ENSPANG00000008978) #30	PSMD6 (ENSPANG00000014295) #31	PRICKLE2 (ENSPANG00000022790) #32	ADAMTS9 (ENSPANG00000006402) #33	MAGI1 (ENSPANG00000024536) #34	SLC25A26 (ENSPANG00000015066) #35	LRIG1 (ENSPANG00000014202) #36
Cercopithecinae_d	ANCESTRAL SPECIES	12	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000018085.a.a.a.a	ENSGT00390000005497.p #20	ENSGT00510000047967 #21	ENSGT00390000000153.l.a.cb.h.b	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00910000146882	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Drill	MODERN SPECIES	1271	DNASE1L3 (ENSMLEG00000039348) #9	ENSMLEG00000007909	ABHD6 (ENSMLEG00000034439) #10	HTD2 (ENSMLEG00000032919) #12	RPP14 (ENSMLEG00000025255)	PXK (ENSMLEG00000035460) #13	PDHB (ENSMLEG00000042649) #14	KCTD6 (ENSMLEG00000040120) #15	ACOX2 (ENSMLEG00000023406) #16	FAM107A (ENSMLEG00000042308) #18	FAM3D (ENSMLEG00000037201) #19	ENSMLEG00000026687	CFAP20DC (ENSMLEG00000043296) #20	FHIT (ENSMLEG00000032123) #21	ENSMLEG00000031389	PTPRG (ENSMLEG00000007529) #22	C3orf14 (ENSMLEG00000033197) #23	FEZF2 (ENSMLEG00000040394) #24	CADPS (ENSMLEG00000029573) #25
Sooty mangabey	MODERN SPECIES	650	DNASE1L3 (ENSCATG00000033881) #9	ABHD6 (ENSCATG00000043430) #10	RPP14 (ENSCATG00000044209)	HTD2 (ENSCATG00000036301) #12	PXK (ENSCATG00000040881) #13	PDHB (ENSCATG00000033647) #14	KCTD6 (ENSCATG00000032690) #15	ACOX2 (ENSCATG00000038077) #16	FAM107A (ENSCATG00000036228) #18	FAM3D (ENSCATG00000042717) #19	CFAP20DC (ENSCATG00000033800) #20	ENSCATG00000022026	FHIT (ENSCATG00000036063) #21	ENSCATG00000001678	ENSCATG00000016623	PTPRG (ENSCATG00000040252) #22	C3orf14 (ENSCATG00000041520) #23	FEZF2 (ENSCATG00000038119) #24	ENSCATG00000007026	ENSCATG00000043197	SYNPR (ENSCATG00000000279) #26	SNTN (ENSCATG00000038530) #27	C3orf49 (ENSCATG00000041531) #28	THOC7 (ENSCATG00000038732) #29	ATXN7 (ENSCATG00000044553) #30	PSMD6 (ENSCATG00000030183) #31	PRICKLE2 (ENSCATG00000030722) #32	ADAMTS9 (ENSCATG00000036951) #33	MAGI1 (ENSCATG00000029406) #34	ENSCATG00000043667	SLC25A26 (ENSCATG00000041774) #35
Macaca	ANCESTRAL SPECIES	5	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497.p #20	ENSGT00510000047967 #21	ENSGT00390000000153.l.a.cb.h.b	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00910000148224	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00910000146882	ENSGT00550000074950 #35
Pig-tailed macaque	MODERN SPECIES	106	FLNB (ENSMNEG00000035632) #8	DNASE1L3 (ENSMNEG00000034780) #9	ENSMNEG00000001241	ABHD6 (ENSMNEG00000037859) #10	RPP14 (ENSMNEG00000028567)	HTD2 (ENSMNEG00000035045) #12	PXK (ENSMNEG00000033433) #13	PDHB (ENSMNEG00000036075) #14	KCTD6 (ENSMNEG00000040452) #15	ACOX2 (ENSMNEG00000032610) #16	FAM107A (ENSMNEG00000042838) #18	FAM3D (ENSMNEG00000036367) #19	CFAP20DC (ENSMNEG00000030469) #20	FHIT (ENSMNEG00000040755) #21	ENSMNEG00000041448	PTPRG (ENSMNEG00000031869) #22	FEZF2 (ENSMNEG00000041706) #24	C3orf14 (ENSMNEG00000039569) #23	ENSMNEG00000027707	CADPS (ENSMNEG00000043979) #25	SYNPR (ENSMNEG00000037219) #26	SNTN (ENSMNEG00000032350) #27	C3orf49 (ENSMNEG00000002764) #28	THOC7 (ENSMNEG00000035012) #29	ATXN7 (ENSMNEG00000037292) #30	PSMD6 (ENSMNEG00000028262) #31	PRICKLE2 (ENSMNEG00000017820) #32	ADAMTS9 (ENSMNEG00000041827) #33	MAGI1 (ENSMNEG00000031705) #34	ENSMNEG00000032876	SLC25A26 (ENSMNEG00000036231) #35
Macaca_a	ANCESTRAL SPECIES	5	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497.p #20	ENSGT00510000047967 #21	ENSGT01100000263493.a.a.a.b.a.a.a.a.a.a.a.b.b.b ##11	ENSGT01050000245604.A	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Rhesus	MODERN SPECIES	11	DNASE1L3 (ENSMMUG00000011235) #9	ABHD6 (ENSMMUG00000006315) #10	RPP14 (ENSMMUG00000002841) #12	PXK (ENSMMUG00000006432) #13	PDHB (ENSMMUG00000015672) #14	KCTD6 (ENSMMUG00000031896) #15	ACOX2 (ENSMMUG00000006229) #16	ENSMMUG00000063800	FAM107A (ENSMMUG00000064614) #18	FAM3D (ENSMMUG00000043629) #19	CFAP20DC (ENSMMUG00000021205) #20	ENSMMUG00000061324	FHIT (ENSMMUG00000012832) #21	ENSMMUG00000065043	ENSMMUG00000063860 ##11	PTPRG (ENSMMUG00000012487) #22	ENSMMUG00000049870	C2H3orf14 (ENSMMUG00000055858) #23	FEZF2 (ENSMMUG00000021592) #24	ENSMMUG00000031902	SYNPR (ENSMMUG00000023718) #26	SNTN (ENSMMUG00000062888) #27	C2H3orf49 (ENSMMUG00000012780) #28	THOC7 (ENSMMUG00000012783) #29	ATXN7 (ENSMMUG00000001508) #30	PSMD6 (ENSMMUG00000001509) #31	PRICKLE2 (ENSMMUG00000001513) #32	ADAMTS9 (ENSMMUG00000000265) #33	MAGI1 (ENSMMUG00000017510) #34	ENSMMUG00000057539	SLC25A26 (ENSMMUG00000001529) #35
Crab-eating macaque	MODERN SPECIES	11	ENSMFAG00000050622	HTD2 (ENSMFAG00000003971) #12	RPP14 (ENSMFAG00000054440)	PXK (ENSMFAG00000031688) #13	PDHB (ENSMFAG00000032932) #14	KCTD6 (ENSMFAG00000040632) #15	ACOX2 (ENSMFAG00000033938) #16	FAM107A (ENSMFAG00000057310) #18	FAM3D (ENSMFAG00000063776) #19	CFAP20DC (ENSMFAG00000002952) #20	ENSMFAG00000062846	FHIT (ENSMFAG00000040773) #21	ENSMFAG00000059503 ##11	ENSMFAG00000054468	ENSMFAG00000003368	PTPRG (ENSMFAG00000044130) #22	ENSMFAG00000050866	C3orf14 (ENSMFAG00000058151) #23	FEZF2 (ENSMFAG00000039881) #24	CADPS (ENSMFAG00000037884) #25	SYNPR (ENSMFAG00000039535) #26	SNTN (ENSMFAG00000041510) #27	C3orf49 (ENSMFAG00000014502) #28	THOC7 (ENSMFAG00000032653) #29	ATXN7 (ENSMFAG00000037665) #30	ENSMFAG00000055512	PSMD6 (ENSMFAG00000040782) #31	PRICKLE2 (ENSMFAG00000002702) #32	ADAMTS9 (ENSMFAG00000036382) #33	MAGI1 (ENSMFAG00000032287) #34	ENSMFAG00000047524
Vervet Monkey	MODERN SPECIES	14	SLMAP (ENSCSAG00000012241) #7	FLNB (ENSCSAG00000012217) #8	DNASE1L3 (ENSCSAG00000012190) #9	ABHD6 (ENSCSAG00000012185) #10	RPP14 (ENSCSAG00000012176)	HTD2 (ENSCSAG00000018798) #12	PXK (ENSCSAG00000012166) #13	PDHB (ENSCSAG00000012153) #14	KCTD6 (ENSCSAG00000012148) #15	ACOX2 (ENSCSAG00000012133) #16	FAM107A (ENSCSAG00000012116) #18	FAM3D (ENSCSAG00000012100) #19	ENSCSAG00000012092 #20	ENSCSAG00000012082 #20	ENSCSAG00000012066	PTPRG (ENSCSAG00000012056) #22	C3orf14 (ENSCSAG00000012039) #23	FEZF2 (ENSCSAG00000012034) #24	ENSCSAG00000012025	SYNPR (ENSCSAG00000012010) #26	C3orf49 (ENSCSAG00000011999) #28	THOC7 (ENSCSAG00000011986) #29	ATXN7 (ENSCSAG00000011977) #30	PSMD6 (ENSCSAG00000011965) #31	PRICKLE2 (ENSCSAG00000011960) #32	ADAMTS9 (ENSCSAG00000011951) #33	MAGI1 (ENSCSAG00000011889) #34	ENSCSAG00000011762	SLC25A26 (ENSCSAG00000011735) #35	LRIG1 (ENSCSAG00000011724) #36	KBTBD8 (ENSCSAG00000011713) #37
Rhinopithecus	ANCESTRAL SPECIES	691																ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00910000148224	ENSGT00940000160100 #24	ENSGT00950000183306 #25
Black snub-nosed monkey	MODERN SPECIES	1675																PTPRG (ENSRBIG00000031950) #22	C3orf14 (ENSRBIG00000034657) #23	FEZF2 (ENSRBIG00000012683) #24	CADPS (ENSRBIG00000035508) #25	MYCBP2 (ENSRBIG00000041647)	FBXL3 (ENSRBIG00000036419)	CLN5 (ENSRBIG00000027889)	ENSRBIG00000007661	ACOD1 (ENSRBIG00000033364)
Golden snub-nosed monkey	MODERN SPECIES	3222																PTPRG (ENSRROG00000041862) #22	ENSRROG00000027969	C3orf14 (ENSRROG00000029234) #23	ENSRROG00000036370	FEZF2 (ENSRROG00000040677) #24	CADPS (ENSRROG00000030504) #25
Platyrrhini	ANCESTRAL SPECIES	18	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00910000147889	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000153783.b.b.c.a.a.b	ENSGT00910000146882
Cebidae	ANCESTRAL SPECIES	14	ENSGT00940000156297	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00910000147889	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000153783.b.b.c.a.a.b	ENSGT00910000146882
Cebidae_a	ANCESTRAL SPECIES	24	ENSGT00540000070023.c.a.b.l.a	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00910000147889	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000153783.b.b.c.a.a.b	ENSGT00910000146882
Capuchin	MODERN SPECIES	48	SNRPD1 (ENSCCAG00000020611)	SLMAP (ENSCCAG00000020439) #7	FLNB (ENSCCAG00000036094) #8	DNASE1L3 (ENSCCAG00000024544) #9	ABHD6 (ENSCCAG00000027507) #10	RPP14 (ENSCCAG00000033002)	PXK (ENSCCAG00000031467) #13	PDHB (ENSCCAG00000023841) #14	KCTD6 (ENSCCAG00000032258) #15	ACOX2 (ENSCCAG00000036274) #16	FAM107A (ENSCCAG00000025613) #18	FAM3D (ENSCCAG00000035965) #19	CFAP20DC (ENSCCAG00000032271) #20	WDR53 (ENSCCAG00000002009)	FHIT (ENSCCAG00000034976) #21	PTPRG (ENSCCAG00000018758) #22	C3orf14 (ENSCCAG00000033614) #23	FEZF2 (ENSCCAG00000024939) #24	ENSCCAG00000034106	CADPS (ENSCCAG00000024148) #25	SYNPR (ENSCCAG00000033216) #26	SNTN (ENSCCAG00000027577) #27	C3orf49 (ENSCCAG00000026972) #28	THOC7 (ENSCCAG00000001638) #29	ATXN7 (ENSCCAG00000023325) #30	PSMD6 (ENSCCAG00000034649) #31	PRICKLE2 (ENSCCAG00000016463) #32	ADAMTS9 (ENSCCAG00000035647) #33
Bolivian squirrel monkey	MODERN SPECIES	168																PTPRG (ENSSBOG00000032020) #22	C3orf14 (ENSSBOG00000030563) #23	FEZF2 (ENSSBOG00000021473) #24	ENSSBOG00000015298	CADPS (ENSSBOG00000000887) #25	ENSSBOG00000027535	ENSSBOG00000031871	SYNPR (ENSSBOG00000030877) #26	SNTN (ENSSBOG00000019708) #27	C3orf49 (ENSSBOG00000028558) #28	THOC7 (ENSSBOG00000021884) #29	ATXN7 (ENSSBOG00000008269) #30	PSMD6 (ENSSBOG00000003468) #31	PRICKLE2 (ENSSBOG00000026179) #32	ADAMTS9 (ENSSBOG00000029171) #33	MAGI1 (ENSSBOG00000027450) #34
Marmoset	MODERN SPECIES	6	ARF4 (ENSCJAG00000040282)	DENND6A (ENSCJAG00000019910)	ENSCJAG00000067423	SLMAP (ENSCJAG00000019871) #7	ENSCJAG00000074595	FLNB (ENSCJAG00000019764) #8	DNASE1L3 (ENSCJAG00000019760) #9	PXK (ENSCJAG00000019744) #13	ENSCJAG00000019739 #14	KCTD6 (ENSCJAG00000077075) #15	ACOX2 (ENSCJAG00000019727) #16	FAM107A (ENSCJAG00000019725) #18	FAM3D (ENSCJAG00000019719) #19	CFAP20DC (ENSCJAG00000019711) #20	FHIT (ENSCJAG00000019708) #21	PTPRG (ENSCJAG00000019680) #22	FEZF2 (ENSCJAG00000079813) #24	C3orf14 (ENSCJAG00000068672) #23	ENSCJAG00000019620	ENSCJAG00000077198	ENSCJAG00000086397	SYNPR (ENSCJAG00000019605) #26	SNTN (ENSCJAG00000041591) #27	C3orf49 (ENSCJAG00000019599) #28	THOC7 (ENSCJAG00000034899) #29	ENSCJAG00000081411	ATXN7 (ENSCJAG00000019570) #30	PSMD6 (ENSCJAG00000019540) #31	ENSCJAG00000071158	PRICKLE2 (ENSCJAG00000019532) #32	ADAMTS9 (ENSCJAG00000019487) #33
Mas night monkey	MODERN SPECIES	625	DENND6A (ENSANAG00000024277)	SLMAP (ENSANAG00000034506) #7	FLNB (ENSANAG00000036066) #8	DNASE1L3 (ENSANAG00000037772) #9	ABHD6 (ENSANAG00000020339) #10	ENSANAG00000028778	ENSANAG00000018785 #12	PXK (ENSANAG00000031813) #13	ENSANAG00000019782 #14	KCTD6 (ENSANAG00000025890) #15	ACOX2 (ENSANAG00000024736) #16	FAM107A (ENSANAG00000032782) #18	FAM3D (ENSANAG00000025080) #19	CFAP20DC (ENSANAG00000035433) #20	FHIT (ENSANAG00000027270) #21	PTPRG (ENSANAG00000036437) #22	C3orf14 (ENSANAG00000036031) #23	FEZF2 (ENSANAG00000027542) #24	ENSANAG00000032183	ENSANAG00000027885
Tarsier	MODERN SPECIES	5203																PTPRG (ENSTSYG00000014424) #22
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Lemuriformes	ANCESTRAL SPECIES	17	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Lemuriformes_a	ANCESTRAL SPECIES	6	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Coquerels sifaka	MODERN SPECIES	50	DENND6A (ENSPCOG00000016384)	SLMAP (ENSPCOG00000002153) #7	FLNB (ENSPCOG00000028790) #8	DNASE1L3 (ENSPCOG00000014644) #9	ABHD6 (ENSPCOG00000023970) #10	RPP14 (ENSPCOG00000027150)	PXK (ENSPCOG00000023402) #13	PDHB (ENSPCOG00000018714) #14	KCTD6 (ENSPCOG00000016167) #15	ACOX2 (ENSPCOG00000027383) #16	FAM107A (ENSPCOG00000016417) #18	FAM3D (ENSPCOG00000016154) #19	CFAP20DC (ENSPCOG00000026642) #20	ENSPCOG00000026096	ENSPCOG00000015146	PTPRG (ENSPCOG00000011073) #22	ENSPCOG00000027667	C3orf14 (ENSPCOG00000020405) #23	FEZF2 (ENSPCOG00000020418) #24	CADPS (ENSPCOG00000027683) #25	SYNPR (ENSPCOG00000022257) #26	SNTN (ENSPCOG00000016354) #27	ENSPCOG00000023618	C3orf49 (ENSPCOG00000016558) #28	ENSPCOG00000022000 #29	ATXN7 (ENSPCOG00000021138) #30	PSMD6 (ENSPCOG00000017855) #31	PRICKLE2 (ENSPCOG00000014318) #32	ADAMTS9 (ENSPCOG00000020855) #33	MAGI1 (ENSPCOG00000016669) #34	SLC25A26 (ENSPCOG00000022748) #35
Greater bamboo lemur	MODERN SPECIES	491																PTPRG (ENSPSMG00000024092) #22	C3orf14 (ENSPSMG00000024011) #23	FEZF2 (ENSPSMG00000024005) #24	ENSPSMG00000023996
Mouse lemur	MODERN SPECIES	23															ENSMICG00000032390	PTPRG (ENSMICG00000016378) #22	C3orf14 (ENSMICG00000043764) #23	FEZF2 (ENSMICG00000005546) #24	ENSMICG00000035241	SYNPR (ENSMICG00000016442) #26	C3orf49 (ENSMICG00000016446) #28	THOC7 (ENSMICG00000045229) #29	ATXN7 (ENSMICG00000014525) #30	ENSMICG00000041614 #31	ENSMICG00000043369 #33	MAGI1 (ENSMICG00000009535) #34	ENSMICG00000046117	GSX2 (ENSMICG00000027995)	CHIC2 (ENSMICG00000034358)	LNX1 (ENSMICG00000008163)	FIP1L1 (ENSMICG00000008149)
Bushbaby	MODERN SPECIES	130	ARF4 (ENSOGAG00000012034)	DENND6A (ENSOGAG00000005320)	SLMAP (ENSOGAG00000032914) #7	FLNB (ENSOGAG00000004454) #8	DNASE1L3 (ENSOGAG00000004461) #9	ABHD6 (ENSOGAG00000006920) #10	ENSOGAG00000029128 #12	PXK (ENSOGAG00000004283) #13	PDHB (ENSOGAG00000004285) #14	KCTD6 (ENSOGAG00000004287) #15	ACOX2 (ENSOGAG00000004289) #16	FAM107A (ENSOGAG00000004293) #18	FAM3D (ENSOGAG00000004294) #19	CFAP20DC (ENSOGAG00000004296) #20	ENSOGAG00000030687	PTPRG (ENSOGAG00000008069) #22	C3orf14 (ENSOGAG00000008107) #23	FEZF2 (ENSOGAG00000008112) #24	ENSOGAG00000008116	SYNPR (ENSOGAG00000000442) #26	SNTN (ENSOGAG00000016059) #27	ENSOGAG00000030192	C3orf49 (ENSOGAG00000015268) #28	THOC7 (ENSOGAG00000024865) #29	ATXN7 (ENSOGAG00000031555) #30	PSMD6 (ENSOGAG00000015279) #31	ENSOGAG00000028241	PRICKLE2 (ENSOGAG00000009507) #32	ADAMTS9 (ENSOGAG00000015548) #33	MAGI1 (ENSOGAG00000000286) #34	ENSOGAG00000033711
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Tree shrew	MODERN SPECIES	2207																PTPRG (ENSTBEG00000001879) #22
Glires	ANCESTRAL SPECIES	2	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Lagomorpha	ANCESTRAL SPECIES	11	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Rabbit	MODERN SPECIES	20	PXK (ENSOCUG00000000833) #13	PDHB (ENSOCUG00000015632) #14	ENSOCUG00000035883	KCTD6 (ENSOCUG00000009284) #15	ACOX2 (ENSOCUG00000004155) #16	FAM107A (ENSOCUG00000004160) #18	FAM3D (ENSOCUG00000002770) #19	CFAP20DC (ENSOCUG00000002773) #20	ENSOCUG00000022146	ENSOCUG00000013177	ENSOCUG00000031954	ENSOCUG00000033273	ENSOCUG00000036123	ENSOCUG00000011936	ENSOCUG00000037455	PTPRG (ENSOCUG00000002809) #22	C3orf14 (ENSOCUG00000002820) #23	FEZF2 (ENSOCUG00000002823) #24	ENSOCUG00000002826	SYNPR (ENSOCUG00000012918) #26	ENSOCUG00000030562	SNTN (ENSOCUG00000004993) #27	ENSOCUG00000009991	ENSOCUG00000029641	C3orf49 (ENSOCUG00000015241) #28	ENSOCUG00000021860 #29	ATXN7 (ENSOCUG00000000803) #30	PSMD6 (ENSOCUG00000025313) #31	PRICKLE2 (ENSOCUG00000000810) #32	ENSOCUG00000039298	ADAMTS9 (ENSOCUG00000000109) #33
Pika	MODERN SPECIES	4959																PTPRG (ENSOPRG00000001803) #22	C3orf14 (ENSOPRG00000001856) #23	ENSOPRG00000001865
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Rodentia_A	ANCESTRAL SPECIES	27				ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Hystricomorpha	ANCESTRAL SPECIES	34	ENSGT00940000156802	ENSGT00940000157248	ENSGT00390000017724.a.a.d	ENSGT00940000156679	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	28	HTD2 (ENSHGLG00000047381) #12	PXK (ENSHGLG00000003319) #13	PDHB (ENSHGLG00000003420) #14	KCTD6 (ENSHGLG00000043396) #15	ACOX2 (ENSHGLG00000003614) #16	FAM107A (ENSHGLG00000039598) #18	ENSHGLG00000044019	ENSHGLG00000042914 #19	CFAP20DC (ENSHGLG00000004034) #20	ENSHGLG00000008440	ENSHGLG00000020136	FHIT (ENSHGLG00000004547) #21	ENSHGLG00000006739	ENSHGLG00000034459	ENSHGLG00000046435	ENSHGLG00000034798 #22	ENSHGLG00000000045 #22	ENSHGLG00000012089 #23	FEZF2 (ENSHGLG00000011569) #24	ENSHGLG00000002399	SYNPR (ENSHGLG00000011002) #26	ENSHGLG00000049764	SNTN (ENSHGLG00000038920) #27	ENSHGLG00000002373	C3orf49 (ENSHGLG00000050624) #28	ENSHGLG00000002165 #29	ATXN7 (ENSHGLG00000008211) #30	PSMD6 (ENSHGLG00000009710) #31	PRICKLE2 (ENSHGLG00000011112) #32	ADAMTS9 (ENSHGLG00000007662) #33	ENSHGLG00000019017 #34
Naked mole-rat female	MODERN SPECIES	28	ENSHGLG00000035658	ENSHGLG00000019017 #34	ADAMTS9 (ENSHGLG00000007662) #33	PRICKLE2 (ENSHGLG00000011112) #32	PSMD6 (ENSHGLG00000009710) #31	ATXN7 (ENSHGLG00000008211) #30	ENSHGLG00000002165 #29	C3orf49 (ENSHGLG00000050624) #28	ENSHGLG00000002373	SNTN (ENSHGLG00000038920) #27	ENSHGLG00000049764	SYNPR (ENSHGLG00000011002) #26	ENSHGLG00000002399	FEZF2 (ENSHGLG00000011569) #24	ENSHGLG00000012089 #23	ENSHGLG00000000045 #22	ENSHGLG00000034798 #22	ENSHGLG00000046435	ENSHGLG00000034459	ENSHGLG00000006739	FHIT (ENSHGLG00000004547) #21	ENSHGLG00000020136	ENSHGLG00000008440	CFAP20DC (ENSHGLG00000004034) #20	ENSHGLG00000042914 #19	ENSHGLG00000044019	FAM107A (ENSHGLG00000039598) #18	ACOX2 (ENSHGLG00000003614) #16	KCTD6 (ENSHGLG00000043396) #15	PDHB (ENSHGLG00000003420) #14	PXK (ENSHGLG00000003319) #13
Hystricomorpha_a	ANCESTRAL SPECIES	50	ENSGT00940000156802	ENSGT00940000157248	ENSGT00390000017724.a.a.d	ENSGT00940000156679	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34
Guinea pig	MODERN SPECIES		COLQ (ENSCPOG00000002476)	EAF1 (ENSCPOG00000031143)	METTL6 (ENSCPOG00000037082)	ABHD6 (ENSCPOG00000037337) #10	RPP14 (ENSCPOG00000004281)	HTD2 (ENSCPOG00000036094) #12	PXK (ENSCPOG00000006707) #13	PDHB (ENSCPOG00000006713) #14	KCTD6 (ENSCPOG00000006719) #15	ACOX2 (ENSCPOG00000006721) #16	FAM107A (ENSCPOG00000014689) #18	FAM3D (ENSCPOG00000014686) #19	CFAP20DC (ENSCPOG00000010572) #20	FHIT (ENSCPOG00000014924) #21	ENSCPOG00000032909	PTPRG (ENSCPOG00000003197) #22	C3orf14 (ENSCPOG00000006026) #23	FEZF2 (ENSCPOG00000001697) #24	ENSCPOG00000001699	SYNPR (ENSCPOG00000012817) #26	SNTN (ENSCPOG00000012821) #27	ENSCPOG00000021409	THOC7 (ENSCPOG00000007930) #29	ATXN7 (ENSCPOG00000002924) #30	PSMD6 (ENSCPOG00000006160) #31	PRICKLE2 (ENSCPOG00000031153) #32	ADAMTS9 (ENSCPOG00000004877) #33	MAGI1 (ENSCPOG00000002169) #34	ENSCPOG00000013562	DYNC1LI1 (ENSCPOG00000011613)	CMTM6 (ENSCPOG00000030201)
Hystricomorpha_b	ANCESTRAL SPECIES	56	ENSGT00940000156802	ENSGT00940000157248	ENSGT00390000017724.a.a.d	ENSGT00940000156679	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34
Long-tailed chinchilla	DUPLICATION
Long-tailed chinchilla	MODERN SPECIES	224															ENSCLAG00000000576 #22	ENSCLAG00000000503 #22	C3orf14 (ENSCLAG00000001711) #23	FEZF2 (ENSCLAG00000001583) #24	ENSCLAG00000000302	SYNPR (ENSCLAG00000000935) #26	SNTN (ENSCLAG00000000879) #27	ENSCLAG00000000236	ENSCLAG00000000766	C3orf49 (ENSCLAG00000000677) #28	THOC7 (ENSCLAG00000000664) #29	ATXN7 (ENSCLAG00000000637) #30	PSMD6 (ENSCLAG00000000621) #31	PRICKLE2 (ENSCLAG00000000605) #32	ADAMTS9 (ENSCLAG00000000831) #33	MAGI1 (ENSCLAG00000000742) #34
Long-tailed chinchilla	MODERN SPECIES	224																ENSCLAG00000000576 #22	ENSCLAG00000000503 #22	C3orf14 (ENSCLAG00000001711) #23	FEZF2 (ENSCLAG00000001583) #24	ENSCLAG00000000302	SYNPR (ENSCLAG00000000935) #26	SNTN (ENSCLAG00000000879) #27	ENSCLAG00000000236	ENSCLAG00000000766	C3orf49 (ENSCLAG00000000677) #28	THOC7 (ENSCLAG00000000664) #29	ATXN7 (ENSCLAG00000000637) #30	PSMD6 (ENSCLAG00000000621) #31	PRICKLE2 (ENSCLAG00000000605) #32	ADAMTS9 (ENSCLAG00000000831) #33	MAGI1 (ENSCLAG00000000742) #34
Degu	MODERN SPECIES	84	HACL1 (ENSODEG00000007866)	COLQ (ENSODEG00000009333)	EAF1 (ENSODEG00000008752)	METTL6 (ENSODEG00000008650)	ENSODEG00000010685	ABHD6 (ENSODEG00000008297) #10	ENSODEG00000010715	PXK (ENSODEG00000009061) #13	PDHB (ENSODEG00000011071) #14	KCTD6 (ENSODEG00000009456) #15	ACOX2 (ENSODEG00000009665) #16	FAM107A (ENSODEG00000009417) #18	FAM3D (ENSODEG00000009550) #19	CFAP20DC (ENSODEG00000010376) #20	ENSODEG00000009079	ENSODEG00000008902 #22
Sciuridae	ANCESTRAL SPECIES	37	ENSGT00940000157248	ENSGT00940000156802	ENSGT00390000013823.a.d	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950.h #35	ENSGT00940000158502 #36
Eurasian red squirrel	MODERN SPECIES	7	HACL1 (ENSSVLG00005022883)	ENSSVLG00005022958	ABHD6 (ENSSVLG00005022978) #10	ENSSVLG00005023010	RPP14 (ENSSVLG00005023037)	HTD2 (ENSSVLG00005023060) #12	PXK (ENSSVLG00005016921) #13	PDHB (ENSSVLG00005017770) #14	KCTD6 (ENSSVLG00005018061) #15	ACOX2 (ENSSVLG00005018118) #16	FAM107A (ENSSVLG00005018396) #18	FAM3D (ENSSVLG00005018585) #19	CFAP20DC (ENSSVLG00005018694) #20	FHIT (ENSSVLG00005018873) #21	ENSSVLG00005018937	PTPRG (ENSSVLG00005019016) #22	C3orf14 (ENSSVLG00005019094) #23	FEZF2 (ENSSVLG00005019149) #24	CADPS (ENSSVLG00005019850) #25	ENSSVLG00005020948	SYNPR (ENSSVLG00005021015) #26	SNTN (ENSSVLG00005021224) #27	C3orf49 (ENSSVLG00005021282) #28	THOC7 (ENSSVLG00005021365) #29	ATXN7 (ENSSVLG00005021435) #30	PSMD6 (ENSSVLG00005021483) #31	PRICKLE2 (ENSSVLG00005021577) #32	ENSSVLG00005021617	ADAMTS9 (ENSSVLG00005021681) #33	MAGI1 (ENSSVLG00005021826) #34	ENSSVLG00005022516
Marmotini	ANCESTRAL SPECIES	12	ENSGT00940000157248	ENSGT00940000156802	ENSGT00390000013823.a.d	ENSGT00510000047225 #10	ENSGT00510000048121.a	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000002873.i #29	ENSGT00390000007318 #28	ENSGT00390000002873.j.b #29	ENSGT00390000002873.j.a #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34
Alpin marmot	MODERN SPECIES	38	METTL6 (ENSMMMG00000014000)	EAF1 (ENSMMMG00000014008)	COLQ (ENSMMMG00000014022)	HACL1 (ENSMMMG00000014084)	ENSMMMG00000014174	ABHD6 (ENSMMMG00000014184) #10	RPP14 (ENSMMMG00000014197)	HTD2 (ENSMMMG00000014203) #12	PXK (ENSMMMG00000014219) #13	PDHB (ENSMMMG00000014290) #14	KCTD6 (ENSMMMG00000014308) #15	ACOX2 (ENSMMMG00000014312) #16	FAM107A (ENSMMMG00000014323) #18	CFAP20DC (ENSMMMG00000014348) #20	ENSMMMG00000014363	PTPRG (ENSMMMG00000014372) #22	C3orf14 (ENSMMMG00000014443) #23	FEZF2 (ENSMMMG00000014492) #24	ENSMMMG00000014517	SYNPR (ENSMMMG00000014720) #26	C3orf49 (ENSMMMG00000014737) #28	ENSMMMG00000014745 #29	ATXN7 (ENSMMMG00000014772) #30	PSMD6 (ENSMMMG00000014830) #31	ENSMMMG00000014837	PRICKLE2 (ENSMMMG00000014839) #32	ADAMTS9 (ENSMMMG00000014865) #33	MAGI1 (ENSMMMG00000014899) #34	SLC25A26 (ENSMMMG00000015028) #35	LRIG1 (ENSMMMG00000015042) #36	ENSMMMG00000015394
Marmotini_b	ANCESTRAL SPECIES	198															ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000002873.i #29	ENSGT00390000007318 #28	ENSGT00390000002873.j.a #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34
Squirrel	MODERN SPECIES	237																ENSSTOG00000020833 #22	C3orf14 (ENSSTOG00000023480) #23	FEZF2 (ENSSTOG00000023296) #24	CADPS (ENSSTOG00000009531) #25	SYNPR (ENSSTOG00000006010) #26	SNTN (ENSSTOG00000005384) #27	ENSSTOG00000030135	THOC7 (ENSSTOG00000012552) #29	ATXN7 (ENSSTOG00000012559) #30	PSMD6 (ENSSTOG00000012571) #31	PRICKLE2 (ENSSTOG00000016224) #32	ADAMTS9 (ENSSTOG00000000700) #33	MAGI1 (ENSSTOG00000028997) #34	SLC25A26 (ENSSTOG00000000915) #35	LRIG1 (ENSSTOG00000024622) #36
Arctic ground squirrel	DUPLICATION
Arctic ground squirrel	MODERN SPECIES	489																ENSUPAG00010021389 #22	ENSUPAG00010021386	ENSUPAG00010021376 #22	C3orf14 (ENSUPAG00010021368) #23	FEZF2 (ENSUPAG00010021362) #24	ENSUPAG00010021262
Arctic ground squirrel	MODERN SPECIES	489														ENSUPAG00010021389 #22	ENSUPAG00010021386	ENSUPAG00010021376 #22	C3orf14 (ENSUPAG00010021368) #23	FEZF2 (ENSUPAG00010021362) #24	ENSUPAG00010021262
Rodentia_B	ANCESTRAL SPECIES	26	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Kangaroo rat	DUPLICATION
Kangaroo rat	MODERN SPECIES	331	Dennd6a (ENSDORG00000008820)	Slmap (ENSDORG00000006527) #7	Flnb (ENSDORG00000013143) #8	Dnase1l3 (ENSDORG00000024128) #9	Abhd6 (ENSDORG00000014648) #10	Rpp14 (ENSDORG00000028703) #12	Pxk (ENSDORG00000009687) #13	ENSDORG00000009685 #14	Kctd6 (ENSDORG00000027474) #15	Acox2 (ENSDORG00000016332) #16	Fam107a (ENSDORG00000005759) #18	Fam3d (ENSDORG00000011108) #19	Cfap20dc (ENSDORG00000011111) #20	Fhit (ENSDORG00000007571) #21	ENSDORG00000029010 #22	ENSDORG00000007693 #22	ENSDORG00000007695 #23	Fezf2 (ENSDORG00000000030) #24	Cadps (ENSDORG00000006824)	Synpr (ENSDORG00000001872) #26	Sntn (ENSDORG00000001877) #27	Cdhr18 (ENSDORG00000027325)	ENSDORG00000028787 #29	Atxn7 (ENSDORG00000007600) #30	Psmd6 (ENSDORG00000007608) #31	Prickle2 (ENSDORG00000005850) #32	Adamts9 (ENSDORG00000001254) #33	Magi1 (ENSDORG00000012586) #34	Slc25a26 (ENSDORG00000003507) #35	Lrig1 (ENSDORG00000003508) #36	Kbtbd8 (ENSDORG00000000438) #37
Kangaroo rat	MODERN SPECIES	331	Arf4 (ENSDORG00000004312)	Dennd6a (ENSDORG00000008820)	Slmap (ENSDORG00000006527) #7	Flnb (ENSDORG00000013143) #8	Dnase1l3 (ENSDORG00000024128) #9	Abhd6 (ENSDORG00000014648) #10	Rpp14 (ENSDORG00000028703) #12	Pxk (ENSDORG00000009687) #13	ENSDORG00000009685 #14	Kctd6 (ENSDORG00000027474) #15	Acox2 (ENSDORG00000016332) #16	Fam107a (ENSDORG00000005759) #18	Fam3d (ENSDORG00000011108) #19	Cfap20dc (ENSDORG00000011111) #20	Fhit (ENSDORG00000007571) #21	ENSDORG00000029010 #22	ENSDORG00000007693 #22	ENSDORG00000007695 #23	Fezf2 (ENSDORG00000000030) #24	Cadps (ENSDORG00000006824)	Synpr (ENSDORG00000001872) #26	Sntn (ENSDORG00000001877) #27	Cdhr18 (ENSDORG00000027325)	ENSDORG00000028787 #29	Atxn7 (ENSDORG00000007600) #30	Psmd6 (ENSDORG00000007608) #31	Prickle2 (ENSDORG00000005850) #32	Adamts9 (ENSDORG00000001254) #33	Magi1 (ENSDORG00000012586) #34	Slc25a26 (ENSDORG00000003507) #35	Lrig1 (ENSDORG00000003508) #36
Myomorpha	ANCESTRAL SPECIES	62		ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873.h #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31
Muroidea	ANCESTRAL SPECIES	76		ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873.h #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31
Muroidea_A	ANCESTRAL SPECIES	32		ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873.h #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.b.a	ENSGT00940000157045	ENSGT00940000161037
Cricetidae	ANCESTRAL SPECIES	31		ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873.h #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.b.a	ENSGT00940000157045	ENSGT00940000161037
Cricetinae	ANCESTRAL SPECIES	9	ENSGT00510000046787.e.a	ENSGT00730000111489	ENSGT00730000111375	ENSGT00390000002485	ENSGT00390000010702	ENSGT00390000002509	ENSGT00940000159025	ENSGT00940000160729.h	ENSGT00710000106792.h	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000002873.h #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.b.a	ENSGT00940000157045	ENSGT00940000161037	ENSGT00940000157780
Chinese hamster chok1gshd	MODERN SPECIES	76	Spp1 (ENSCGRG00001012247)	Pkd2 (ENSCGRG00001016312)	Thoc2l (ENSCGRG00001009811)	ENSCGRG00001023071	Abcg3 (ENSCGRG00001004887)	ENSCGRG00001000571	Kctd6 (ENSCGRG00001009848) #15	Acox2 (ENSCGRG00001013444) #16	Fam107a (ENSCGRG00001022141) #18	Fam3d (ENSCGRG00001000168) #19	ENSCGRG00001016036	Cfap20dc (ENSCGRG00001017819) #20	ENSCGRG00001011021	ENSCGRG00001008920	Fhit (ENSCGRG00001000886) #21	ENSCGRG00001023304 #22	3830406C13Rik (ENSCGRG00001009640) #23	Fezf2 (ENSCGRG00001011113) #24	Cadps (ENSCGRG00001018622)	Synpr (ENSCGRG00001024206) #26	Sntn (ENSCGRG00001000254) #27	Cdhr18 (ENSCGRG00001009383)	Thoc7 (ENSCGRG00001014815) #29	Atxn7 (ENSCGRG00001022842) #30	Psmd6 (ENSCGRG00001024223) #31	Or2t6 (ENSCGRG00001010437)	ENSCGRG00001010787	Or2t1 (ENSCGRG00001012106)	ENSCGRG00001010774	ENSCGRG00001011280	ENSCGRG00001010807
Golden Hamster	MODERN SPECIES	679	Sparcl1 (ENSMAUG00000001180)	Dspp (ENSMAUG00000003984)	Dmp1 (ENSMAUG00000005904)	Ibsp (ENSMAUG00000016877)	Mepe (ENSMAUG00000017270)	Spp1 (ENSMAUG00000018138)	Pkd2 (ENSMAUG00000006073)	ENSMAUG00000012640	ENSMAUG00000010500	Kctd6 (ENSMAUG00000012810) #15	Acox2 (ENSMAUG00000013454) #16	Fam107a (ENSMAUG00000014387) #18	Fam3d (ENSMAUG00000019297) #19	Cfap20dc (ENSMAUG00000000388) #20	Fhit (ENSMAUG00000008107) #21	ENSMAUG00000011303 #22	3830406C13Rik (ENSMAUG00000014212) #23	Fezf2 (ENSMAUG00000016293) #24	Cadps (ENSMAUG00000017076)	Synpr (ENSMAUG00000000263) #26	Sntn (ENSMAUG00000004227) #27	Cdhr18 (ENSMAUG00000007566)	Thoc7 (ENSMAUG00000002228) #29	Atxn7 (ENSMAUG00000006633) #30	Psmd6 (ENSMAUG00000012233) #31	Or2t6 (ENSMAUG00000018019)	Or2t1 (ENSMAUG00000017961)	Or2t35 (ENSMAUG00000018066)	Slc4a7 (ENSMAUG00000014858)	Lrrc3b (ENSMAUG00000014757)
Cricetidae_B	ANCESTRAL SPECIES	42		ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873.h #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.b.a	ENSGT00940000157045	ENSGT00940000161037
Prairie vole	MODERN SPECIES	14	Gm45521 (ENSMOCG00000005472)	Dnase1l3 (ENSMOCG00000006651) #9	Abhd6 (ENSMOCG00000013420) #10	ENSMOCG00000015810	Rpp14 (ENSMOCG00000012609) #12	Pxk (ENSMOCG00000016503) #13	Pdhb (ENSMOCG00000021251) #14	Kctd6 (ENSMOCG00000016836) #15	Acox2 (ENSMOCG00000020368) #16	Fam107a (ENSMOCG00000022210) #18	Fam3d (ENSMOCG00000000282) #19	ENSMOCG00000014517	Cfap20dc (ENSMOCG00000013078) #20	Fhit (ENSMOCG00000002096) #21	ENSMOCG00000001937	ENSMOCG00000006123 #22	3830406C13Rik (ENSMOCG00000002777) #23	Fezf2 (ENSMOCG00000008456) #24	Cadps (ENSMOCG00000000470)	Synpr (ENSMOCG00000017455) #26	Sntn (ENSMOCG00000022682) #27	Cdhr18 (ENSMOCG00000002117)	Thoc7 (ENSMOCG00000019446) #29	Atxn7 (ENSMOCG00000018713) #30	Psmd6 (ENSMOCG00000000946) #31	ENSMOCG00000003409	ENSMOCG00000012122	Or2t6 (ENSMOCG00000002330)	ENSMOCG00000012041	ENSMOCG00000023004	ENSMOCG00000002652
Northern American deer mouse	MODERN SPECIES	22	Dnase1l3 (ENSPEMG00000010743) #9	Abhd6 (ENSPEMG00000014877) #10	ENSPEMG00000029189	Rpp14 (ENSPEMG00000006600) #12	Pxk (ENSPEMG00000000865) #13	Pdhb (ENSPEMG00000010631) #14	ENSPEMG00000017537	Kctd6 (ENSPEMG00000026577) #15	Acox2 (ENSPEMG00000016996) #16	Fam107a (ENSPEMG00000030495) #18	Fam3d (ENSPEMG00000013914) #19	Cfap20dc (ENSPEMG00000013755) #20	Fhit (ENSPEMG00000014589) #21	ENSPEMG00000000080	ENSPEMG00000028105	ENSPEMG00000013206 #22	3830406C13Rik (ENSPEMG00000016152) #23	Fezf2 (ENSPEMG00000016571) #24	Cadps (ENSPEMG00000018786)	Synpr (ENSPEMG00000008249) #26	Sntn (ENSPEMG00000009053) #27	Cdhr18 (ENSPEMG00000018094)	Gm11100 (ENSPEMG00000031200) #28	Thoc7 (ENSPEMG00000000620) #29	Atxn7 (ENSPEMG00000003214) #30	Psmd6 (ENSPEMG00000007867) #31	Or2t6 (ENSPEMG00000014010)	Or2t1 (ENSPEMG00000014201)	Or2t35 (ENSPEMG00000030359)	Slc4a7 (ENSPEMG00000020169)	Nek10 (ENSPEMG00000002287)
Murinae	ANCESTRAL SPECIES	26	ENSGT00940000153661.a.b.a.b.a.a	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873.h #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.b.a	ENSGT00940000157045	ENSGT00940000161037
Mus	ANCESTRAL SPECIES	8	ENSGT00860000135929	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873.h #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.b.a	ENSGT00940000157045	ENSGT00940000161037
Mus_A	ANCESTRAL SPECIES	12	ENSGT00860000135929	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873.h #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.b.a	ENSGT00940000157045	ENSGT00940000161037
Mus_B	ANCESTRAL SPECIES	11	ENSGT00860000135929	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873.h #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT00940000171119	ENSGT01090000260018.A.a.a.a.b.a	ENSGT00940000157045
Mus_C	ANCESTRAL SPECIES	26	ENSGT00860000135929	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873.h #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT00940000171119	ENSGT01090000260018.A.a.a.a.b.a	ENSGT00940000157045
Steppe mouse	MODERN SPECIES	3289																ENSMSIG00000012954 #22	3830406C13Rik (ENSMSIG00000013274) #23	Fezf2 (ENSMSIG00000013414) #24	Cadps (ENSMSIG00000013441)	ENSMSIG00000013985	Synpr (ENSMSIG00000013996) #26	Sntn (ENSMSIG00000014089) #27	Cdhr18 (ENSMSIG00000014106)	ENSMSIG00000014142	Gm11100 (ENSMSIG00000014159) #28	Thoc7 (ENSMSIG00000014175) #29	Atxn7 (ENSMSIG00000014195) #30	Psmd6 (ENSMSIG00000014259) #31	Or2t6 (ENSMSIG00000014274)	Or2t1 (ENSMSIG00000014281)	Il3ra (ENSMSIG00000014289)
spretus	MODERN SPECIES	5			MGP_SPRETEiJ_G0019813	Flnb (MGP_SPRETEiJ_G0019814) #8	Dnase1l3 (MGP_SPRETEiJ_G0019815) #9	Abhd6 (MGP_SPRETEiJ_G0019816) #10	Rpp14 (MGP_SPRETEiJ_G0019817) #12	Pxk (MGP_SPRETEiJ_G0019818) #13	Pdhb (MGP_SPRETEiJ_G0019819) #14	Kctd6 (MGP_SPRETEiJ_G0019820) #15	Acox2 (MGP_SPRETEiJ_G0019821) #16	Fam107a (MGP_SPRETEiJ_G0019822) #18	Fam3d (MGP_SPRETEiJ_G0019823) #19	Cfap20dc (MGP_SPRETEiJ_G0019824) #20	Fhit (MGP_SPRETEiJ_G0019825) #21	MGP_SPRETEiJ_G0019826 #22	MGP_SPRETEiJ_G0019827 #23	Fezf2 (MGP_SPRETEiJ_G0019828) #24	Cadps (MGP_SPRETEiJ_G0019829)	Synpr (MGP_SPRETEiJ_G0019830) #26	Sntn (MGP_SPRETEiJ_G0019831) #27	Cdhr18 (MGP_SPRETEiJ_G0019832)	Thoc7 (MGP_SPRETEiJ_G0019833) #29	MGP_SPRETEiJ_G0019834 #30	Psmd6 (MGP_SPRETEiJ_G0019835) #31	Or2t6 (MGP_SPRETEiJ_G0019836)	Or2t1 (MGP_SPRETEiJ_G0019837)	Il3ra (MGP_SPRETEiJ_G0019838)	Or2t35 (MGP_SPRETEiJ_G0019839)	Slc4a7 (MGP_SPRETEiJ_G0019840)	Nek10 (MGP_SPRETEiJ_G0019841)
Mouse	MODERN SPECIES	5	Gm10128 (ENSMUSG00000063277)	Flnb (ENSMUSG00000025278) #8	Gm45521 (ENSMUSG00000109649)	Dnase1l3 (ENSMUSG00000025279) #9	Abhd6 (ENSMUSG00000025277) #10	Rpp14 (ENSMUSG00000023156) #12	Pxk (ENSMUSG00000033885) #13	Pdhb (ENSMUSG00000021748) #14	Kctd6 (ENSMUSG00000021752) #15	Acox2 (ENSMUSG00000021751) #16	Fam107a (ENSMUSG00000021750) #18	Fam3d (ENSMUSG00000021749) #19	Cfap20dc (ENSMUSG00000021747) #20	Fhit (ENSMUSG00000060579) #21	Gm3839 (ENSMUSG00000097148)	PTPRG (ENSMUSG00000121513) #22	3830406C13Rik (ENSMUSG00000033111) #23	Gm49355 (ENSMUSG00000114378)	Fezf2 (ENSMUSG00000021743) #24	Cadps (ENSMUSG00000054423)	Synpr (ENSMUSG00000056296) #26	Sntn (ENSMUSG00000044772) #27	Cdhr18 (ENSMUSG00000084902)	Gm11100 (ENSMUSG00000079357) #28	Thoc7 (ENSMUSG00000053453) #29	Atxn7 (ENSMUSG00000021738) #30	Psmd6 (ENSMUSG00000021737) #31	Or2t6 (ENSMUSG00000052417)	Or2t1 (ENSMUSG00000072707)	Il3ra (ENSMUSG00000068758)	Or2t35 (ENSMUSG00000091809)
Ryukyu mouse	MODERN SPECIES	5		MGP_CAROLIEiJ_G0018936	Flnb (MGP_CAROLIEiJ_G0018937) #8	Dnase1l3 (MGP_CAROLIEiJ_G0018938) #9	Abhd6 (MGP_CAROLIEiJ_G0018939) #10	Rpp14 (MGP_CAROLIEiJ_G0018940) #12	Pxk (MGP_CAROLIEiJ_G0018941) #13	Pdhb (MGP_CAROLIEiJ_G0018942) #14	Kctd6 (MGP_CAROLIEiJ_G0018943) #15	Acox2 (MGP_CAROLIEiJ_G0018944) #16	Fam107a (MGP_CAROLIEiJ_G0018945) #18	Fam3d (MGP_CAROLIEiJ_G0018946) #19	Cfap20dc (MGP_CAROLIEiJ_G0018947) #20	Fhit (MGP_CAROLIEiJ_G0018948) #21	MGP_CAROLIEiJ_G0018949	MGP_CAROLIEiJ_G0018950 #22	MGP_CAROLIEiJ_G0018951 #23	Fezf2 (MGP_CAROLIEiJ_G0018952) #24	Cadps (MGP_CAROLIEiJ_G0018953)	Synpr (MGP_CAROLIEiJ_G0018954) #26	Sntn (MGP_CAROLIEiJ_G0018955) #27	Cdhr18 (MGP_CAROLIEiJ_G0018956)	Thoc7 (MGP_CAROLIEiJ_G0018957) #29	Atxn7 (MGP_CAROLIEiJ_G0018958) #30	Psmd6 (MGP_CAROLIEiJ_G0018959) #31	Or2t6 (MGP_CAROLIEiJ_G0018960)	Or2t1 (MGP_CAROLIEiJ_G0018961)	Il3ra (MGP_CAROLIEiJ_G0018962)	Or2t35 (MGP_CAROLIEiJ_G0018963)	Slc4a7 (MGP_CAROLIEiJ_G0018964)	MGP_CAROLIEiJ_G0018965
Shrew mouse	MODERN SPECIES	21			MGP_PahariEiJ_G0029951	Flnb (MGP_PahariEiJ_G0029952) #8	Dnase1l3 (MGP_PahariEiJ_G0029953) #9	Abhd6 (MGP_PahariEiJ_G0029954) #10	Rpp14 (MGP_PahariEiJ_G0029955) #12	Pxk (MGP_PahariEiJ_G0029956) #13	Pdhb (MGP_PahariEiJ_G0029957) #14	Kctd6 (MGP_PahariEiJ_G0029958) #15	Acox2 (MGP_PahariEiJ_G0029959) #16	Fam107a (MGP_PahariEiJ_G0029960) #18	Fam3d (MGP_PahariEiJ_G0029961) #19	Cfap20dc (MGP_PahariEiJ_G0029962) #20	Fhit (MGP_PahariEiJ_G0029963) #21	MGP_PahariEiJ_G0029964 #22	MGP_PahariEiJ_G0029965 #23	Fezf2 (MGP_PahariEiJ_G0029966) #24	Cadps (MGP_PahariEiJ_G0029967)	Synpr (MGP_PahariEiJ_G0029968) #26	Sntn (MGP_PahariEiJ_G0029969) #27	Cdhr18 (MGP_PahariEiJ_G0029970)	Thoc7 (MGP_PahariEiJ_G0029971) #29	Atxn7 (MGP_PahariEiJ_G0029972) #30	Psmd6 (MGP_PahariEiJ_G0029973) #31	Or2t6 (MGP_PahariEiJ_G0029974)	Or2t1 (MGP_PahariEiJ_G0029975)	MGP_PahariEiJ_G0029976	Or2t35 (MGP_PahariEiJ_G0029977)	Slc4a7 (MGP_PahariEiJ_G0029978)	Nek10 (MGP_PahariEiJ_G0029979)
Rat	MODERN SPECIES	6	Abhd6 (ENSRNOG00000008167) #10	Rpp14 (ENSRNOG00000039829)	Rpp14 (ENSRNOG00000063660) #12	Pxk (ENSRNOG00000008024) #13	Pdhb (ENSRNOG00000007895) #14	AABR07072440.1 (ENSRNOG00000033030)	ENSRNOG00000028821	Kctd6 (ENSRNOG00000007817) #15	Acox2 (ENSRNOG00000007378) #16	Fam107a (ENSRNOG00000033261) #18	Fam3d (ENSRNOG00000007320) #19	ENSRNOG00000070952	Cfap20dc (ENSRNOG00000007206) #20	Fhit (ENSRNOG00000064939) #21	Tpt1-ps2 (ENSRNOG00000070732)	Ptprg (ENSRNOG00000009419) #22	LOC103693281 (ENSRNOG00000063454)	RGD1306063 (ENSRNOG00000039871) #23	Fezf2 (ENSRNOG00000009206) #24	Cadps (ENSRNOG00000008570)	ENSRNOG00000068103	Synpr (ENSRNOG00000008203) #26	Sntn (ENSRNOG00000027383) #27	LOC100910341 (ENSRNOG00000070440)	RGD1565725 (ENSRNOG00000070977)	LOC102550375 (ENSRNOG00000027633) #28	Thoc7 (ENSRNOG00000007701) #29	Atxn7 (ENSRNOG00000007246) #30	Psmd6 (ENSRNOG00000006751) #31	Or2t6 (ENSRNOG00000063635)	Or2t1 (ENSRNOG00000068637)
Upper Galilee mountains blind mole rat	MODERN SPECIES	562															Fhit (ENSNGAG00000011060) #21	ENSNGAG00000008882 #22	3830406C13Rik (ENSNGAG00000022626) #23	Fezf2 (ENSNGAG00000022336) #24	Cadps (ENSNGAG00000021325)	Synpr (ENSNGAG00000012667) #26	Sntn (ENSNGAG00000021387) #27	Cdhr18 (ENSNGAG00000021328)	ENSNGAG00000022918 #29
Lesser Egyptian jerboa	MODERN SPECIES	82																ENSJJAG00000011476 #22	Fezf2 (ENSJJAG00000018215) #24	Cadps (ENSJJAG00000012695)	Synpr (ENSJJAG00000014840) #26	Sntn (ENSJJAG00000015141) #27	Cdhr18 (ENSJJAG00000015546)	Thoc7 (ENSJJAG00000016662) #29	Atxn7 (ENSJJAG00000018348) #30	Psmd6 (ENSJJAG00000020880) #31	ENSJJAG00000017345	Or2t35 (ENSJJAG00000014412)	Dnah1 (ENSJJAG00000011990)	Bap1 (ENSJJAG00000024249)	Phf7 (ENSJJAG00000001008)	Sema3g (ENSJJAG00000004734)	Tnnc1 (ENSJJAG00000009720)
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Eulipotyphla	ANCESTRAL SPECIES	285																ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a
Common shrew	MODERN SPECIES	3162																PTPRG (ENSSARG00000009779) #22	C3orf14 (ENSSARG00000009928) #23	FEZF2 (ENSSARG00000009934) #24	ENSSARG00000009948
Hedgehog	MODERN SPECIES	4170																ENSEEUG00000004681 #22
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Artiodactyla_a	ANCESTRAL SPECIES	18	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Camelidae	ANCESTRAL SPECIES	7	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Arabian camel	MODERN SPECIES	8	SLMAP (ENSCDRG00005018160) #7	FLNB (ENSCDRG00005018788) #8	DNASE1L3 (ENSCDRG00005019156) #9	ENSCDRG00005019192	ABHD6 (ENSCDRG00005019209) #10	RPP14 (ENSCDRG00005019234)	HTD2 (ENSCDRG00005019248) #12	PXK (ENSCDRG00005019326) #13	PDHB (ENSCDRG00005020239) #14	KCTD6 (ENSCDRG00005020274) #15	ACOX2 (ENSCDRG00005020282) #16	FAM107A (ENSCDRG00005020301) #18	FAM3D (ENSCDRG00005020324) #19	CFAP20DC (ENSCDRG00005020351) #20	FHIT (ENSCDRG00005020377) #21	PTPRG (ENSCDRG00005020404) #22	ENSCDRG00005020465	C3orf14 (ENSCDRG00005020482) #23	FEZF2 (ENSCDRG00005020488) #24	ENSCDRG00005020523	SYNPR (ENSCDRG00005020648) #26	SNTN (ENSCDRG00005020668) #27	C3orf49 (ENSCDRG00005020674) #28	THOC7 (ENSCDRG00005020683) #29	ATXN7 (ENSCDRG00005020697) #30	PSMD6 (ENSCDRG00005020711) #31	PRICKLE2 (ENSCDRG00005020751) #32	ADAMTS9 (ENSCDRG00005020777) #33	MAGI1 (ENSCDRG00005020840) #34	SLC25A26 (ENSCDRG00005021013) #35	LRIG1 (ENSCDRG00005021027) #36
Alpaca	MODERN SPECIES	931																PTPRG (ENSVPAG00000004822) #22	C3orf14 (ENSVPAG00000004823) #23	ENSVPAG00000004824 #24	ENSVPAG00000004825	SYNPR (ENSVPAG00000004826) #26	SNTN (ENSVPAG00000004827) #27
Artiodactyla_b	ANCESTRAL SPECIES	21	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Pecora	ANCESTRAL SPECIES	17	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121.i	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.p	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Yarkand deer	MODERN SPECIES	16	ENSCHYG00000026831	DNASE1L3 (ENSCHYG00000026838) #9	ABHD6 (ENSCHYG00000026878) #10	ENSCHYG00000026894	ENSCHYG00000026897 #12	PXK (ENSCHYG00000026930) #13	PDHB (ENSCHYG00000026973) #14	KCTD6 (ENSCHYG00000026981) #15	ACOX2 (ENSCHYG00000026985) #16	FAM107A (ENSCHYG00000026993) #18	FAM3D (ENSCHYG00000026999) #19	CFAP20DC (ENSCHYG00000027019) #20	ENSCHYG00000027054	FHIT (ENSCHYG00000027057) #21	ENSCHYG00000013777	PTPRG (ENSCHYG00000013912) #22	C3orf14 (ENSCHYG00000014502) #23	FEZF2 (ENSCHYG00000014589) #24	ENSCHYG00000014655	ENSCHYG00000014745	SYNPR (ENSCHYG00000015063) #26	ENSCHYG00000015619 #27	C3orf49 (ENSCHYG00000015763) #28	THOC7 (ENSCHYG00000016054) #29	ATXN7 (ENSCHYG00000016316) #30	PSMD6 (ENSCHYG00000016855) #31	PRICKLE2 (ENSCHYG00000016954) #32	ADAMTS9 (ENSCHYG00000017101) #33	MAGI1 (ENSCHYG00000018496) #34	ENSCHYG00000021268	SLC25A26 (ENSCHYG00000021357) #35
Percora_a	ANCESTRAL SPECIES	19	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121.i	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.p	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Siberian musk deer	MODERN SPECIES	1221	DENND6A (ENSMMSG00000015208)	SLMAP (ENSMMSG00000015387) #7	FLNB (ENSMMSG00000016309) #8	DNASE1L3 (ENSMMSG00000017047) #9	ABHD6 (ENSMMSG00000017116) #10	ENSMMSG00000017169	HTD2 (ENSMMSG00000017200) #12	PXK (ENSMMSG00000017258) #13	PDHB (ENSMMSG00000017687) #14	KCTD6 (ENSMMSG00000017765) #15	ACOX2 (ENSMMSG00000017804) #16	FAM107A (ENSMMSG00000017997) #18	FAM3D (ENSMMSG00000018088) #19	CFAP20DC (ENSMMSG00000018150) #20	FHIT (ENSMMSG00000018323) #21	PTPRG (ENSMMSG00000018405) #22	ENSMMSG00000018833	C3orf14 (ENSMMSG00000018848) #23	FEZF2 (ENSMMSG00000018876) #24	ENSMMSG00000018917
Bovidae	ANCESTRAL SPECIES	19	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121.i	ENSGT00530000065109.g #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.p	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Caprinae	ANCESTRAL SPECIES	15	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121.i	ENSGT00530000065109.g #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.p	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Rambouillet Sheep	MODERN SPECIES	10	SLMAP (ENSOARG00020011836) #7	FLNB (ENSOARG00020010340) #8	DNASE1L3 (ENSOARG00020010174) #9	ABHD6 (ENSOARG00020025651) #10	RPP14 (ENSOARG00020025646)	PXK (ENSOARG00020025560) #13	PDHB (ENSOARG00020025513) #14	ENSOARG00020025507	KCTD6 (ENSOARG00020025501) #15	ACOX2 (ENSOARG00020025478) #16	FAM107A (ENSOARG00020025461) #18	FAM3D (ENSOARG00020025418) #19	ENSOARG00020025372	FHIT (ENSOARG00020025365) #21	ENSOARG00020025360	PTPRG (ENSOARG00020025302) #22	C3orf14 (ENSOARG00020025268) #23	FEZF2 (ENSOARG00020025251) #24	ENSOARG00020024987	SYNPR (ENSOARG00020024871) #26	SNTN (ENSOARG00020024841) #27	C3orf49 (ENSOARG00020024817) #28	THOC7 (ENSOARG00020024776) #29	ATXN7 (ENSOARG00020024681) #30	PSMD6 (ENSOARG00020024605) #31	PRICKLE2 (ENSOARG00020024549) #32	ADAMTS9 (ENSOARG00020024236) #33	MAGI1 (ENSOARG00020023373) #34	SLC25A26 (ENSOARG00020023224) #35	LRIG1 (ENSOARG00020023098) #36	KBTBD8 (ENSOARG00020023050) #37
Goat	MODERN SPECIES	14	SLMAP (ENSCHIG00000009299) #7	FLNB (ENSCHIG00000015995) #8	DNASE1L3 (ENSCHIG00000022130) #9	ABHD6 (ENSCHIG00000013660) #10	RPP14 (ENSCHIG00000019415)	ENSCHIG00000012688 #12	PXK (ENSCHIG00000024839) #13	ENSCHIG00000012102 #14	KCTD6 (ENSCHIG00000014901) #15	ACOX2 (ENSCHIG00000014174) #16	FAM107A (ENSCHIG00000001759) #18	FAM3D (ENSCHIG00000010042) #19	CFAP20DC (ENSCHIG00000010846) #20	ENSCHIG00000016747	ENSCHIG00000010336	PTPRG (ENSCHIG00000017497) #22	C3orf14 (ENSCHIG00000016342) #23	FEZF2 (ENSCHIG00000011964) #24	ENSCHIG00000014909	ENSCHIG00000016893	ENSCHIG00000019114	SYNPR (ENSCHIG00000026328) #26	SNTN (ENSCHIG00000013587) #27	C3orf49 (ENSCHIG00000024382) #28	THOC7 (ENSCHIG00000018603) #29	ATXN7 (ENSCHIG00000023713) #30	PSMD6 (ENSCHIG00000024309) #31	PRICKLE2 (ENSCHIG00000010654) #32	ADAMTS9 (ENSCHIG00000017918) #33	MAGI1 (ENSCHIG00000012723) #34	ENSCHIG00000008422
Bovinae	ANCESTRAL SPECIES	16	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121.i	ENSGT00530000065109.g #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.p	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00390000006192.nb	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Bos	ANCESTRAL SPECIES	16	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121.i	ENSGT00530000065109.g #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.p	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00390000006192.nb	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Bos_b	ANCESTRAL SPECIES	17	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00530000065109.g #12	ENSGT00510000048121.i	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00950000183306 #25	ENSGT00590000083094.a.a.p	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT01100000263511.b.a.b.a.b.a.b.b.a.b.a.b.a.a.b.a.b	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00390000006192.nb	ENSGT00940000155820 #34
Hybrid Bos Indicus	MODERN SPECIES	14	DNASE1L3 (ENSBIXG00005030486) #9	ENSBIXG00005030495 #10	ENSBIXG00005030516 #12	ENSBIXG00005030552	PXK (ENSBIXG00005030611) #13	PDHB (ENSBIXG00005030678) #14	ENSBIXG00005030689	KCTD6 (ENSBIXG00005030695) #15	ACOX2 (ENSBIXG00005030705) #16	FAM107A (ENSBIXG00005030714) #18	FAM3D (ENSBIXG00005030732) #19	CFAP20DC (ENSBIXG00005030757) #20	FHIT (ENSBIXG00005030806) #21	ENSBIXG00005030814	ENSBIXG00005030817	PTPRG (ENSBIXG00005030859) #22	ENSBIXG00005030920	ENSBIXG00005030923	C3orf14 (ENSBIXG00005030927) #23	FEZF2 (ENSBIXG00005030934) #24	ENSBIXG00005030940	ENSBIXG00005030983	SYNPR (ENSBIXG00005031052) #26	SNTN (ENSBIXG00005031067) #27	THOC7 (ENSBIXG00005031087) #29	ATXN7 (ENSBIXG00005031097) #30	ENSBIXG00005031105	PRICKLE2 (ENSBIXG00005031115) #32	ADAMTS9 (ENSBIXG00005031151) #33	ENSBIXG00005031164	ENSBIXG00005031172
Cow	MODERN SPECIES	14	SLMAP (ENSBTAG00000021164) #7	FLNB (ENSBTAG00000022004) #8	DNASE1L3 (ENSBTAG00000018294) #9	ENSBTAG00000048746	ABHD6 (ENSBTAG00000016615) #10	RPP14 (ENSBTAG00000019987)	PXK (ENSBTAG00000019989) #13	PDHB (ENSBTAG00000021724) #14	KCTD6 (ENSBTAG00000022656) #15	ACOX2 (ENSBTAG00000004178) #16	FAM107A (ENSBTAG00000046763) #18	FAM3D (ENSBTAG00000023207) #19	CFAP20DC (ENSBTAG00000020373) #20	FHIT (ENSBTAG00000014418) #21	ENSBTAG00000051322	PTPRG (ENSBTAG00000021911) #22	C22H3orf14 (ENSBTAG00000001889) #23	FEZF2 (ENSBTAG00000020302) #24	CADPS (ENSBTAG00000005321) #25	SYNPR (ENSBTAG00000000265) #26	SNTN (ENSBTAG00000013026) #27	C22H3orf49 (ENSBTAG00000039133) #28	THOC7 (ENSBTAG00000032872) #29	ATXN7 (ENSBTAG00000011287) #30	ENSBTAG00000052900	PSMD6 (ENSBTAG00000015112) #31	PRICKLE2 (ENSBTAG00000021835) #32	ADAMTS9 (ENSBTAG00000003165) #33	ENSBTAG00000019048	MAGI1 (ENSBTAG00000010581) #34	ENSBTAG00000050439
Bos_a	ANCESTRAL SPECIES	9	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121.i	ENSGT00530000065109.g #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00950000185179	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.p	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00390000006192.nb	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Wild yak	MODERN SPECIES	516													FHIT (ENSBMUG00000011983) #21	ENSBMUG00000011991	ENSBMUG00000011995	PTPRG (ENSBMUG00000012281) #22	ENSBMUG00000012498	C3orf14 (ENSBMUG00000012504) #23	FEZF2 (ENSBMUG00000012516) #24	CADPS (ENSBMUG00000012816) #25	SYNPR (ENSBMUG00000013046) #26	SNTN (ENSBMUG00000013068) #27	C3orf49 (ENSBMUG00000013087) #28	THOC7 (ENSBMUG00000013107) #29	ATXN7 (ENSBMUG00000013154) #30	PRICKLE2 (ENSBMUG00000013184) #32
Domestic yak	MODERN SPECIES	14	ENSBGRG00000026068	ENSBGRG00000026079 #12	PXK (ENSBGRG00000026115) #13	PDHB (ENSBGRG00000026264) #14	KCTD6 (ENSBGRG00000026274) #15	ACOX2 (ENSBGRG00000026285) #16	ENSBGRG00000026305 #18	FAM3D (ENSBGRG00000026326) #19	CFAP20DC (ENSBGRG00000026346) #20	FHIT (ENSBGRG00000026409) #21	ENSBGRG00000026413	ENSBGRG00000026418	ENSBGRG00000026422	ENSBGRG00000026423	ENSBGRG00000026428	PTPRG (ENSBGRG00000026439) #22	ENSBGRG00000026498	C3orf14 (ENSBGRG00000026503) #23	FEZF2 (ENSBGRG00000026510) #24	ENSBGRG00000026531	SYNPR (ENSBGRG00000026605) #26	SNTN (ENSBGRG00000026611) #27	ENSBGRG00000026614	C3orf49 (ENSBGRG00000026615) #28	THOC7 (ENSBGRG00000026618) #29	ATXN7 (ENSBGRG00000026626) #30	PRICKLE2 (ENSBGRG00000026631) #32	ADAMTS9 (ENSBGRG00000026643) #33	ENSBGRG00000010645	ENSBGRG00000010692	ENSBGRG00000010739
American bison	MODERN SPECIES	3218	FLNB (ENSBBBG00000019924) #8	DNASE1L3 (ENSBBBG00000019985) #9	ABHD6 (ENSBBBG00000020006) #10	RPP14 (ENSBBBG00000020021)	HTD2 (ENSBBBG00000005419) #12	PXK (ENSBBBG00000020262) #13	PDHB (ENSBBBG00000020298) #14	KCTD6 (ENSBBBG00000020309) #15	ACOX2 (ENSBBBG00000020341) #16	FAM107A (ENSBBBG00000020372) #18	FAM3D (ENSBBBG00000020387) #19	ENSBBBG00000020395 #20	ENSBBBG00000020400 #20	FHIT (ENSBBBG00000020412) #21	ENSBBBG00000000706	PTPRG (ENSBBBG00000000590) #22	C3orf14 (ENSBBBG00000000579) #23	FEZF2 (ENSBBBG00000000567) #24	CADPS (ENSBBBG00000008952) #25	SYNPR (ENSBBBG00000020682) #26	SNTN (ENSBBBG00000020783) #27	C3orf49 (ENSBBBG00000020799) #28	ENSBBBG00000020811 #29	ATXN7 (ENSBBBG00000005611) #30	PSMD6 (ENSBBBG00000008784) #31	PRICKLE2 (ENSBBBG00000020897) #32	ADAMTS9 (ENSBBBG00000021063) #33	ENSBBBG00000021083	MAGI1 (ENSBBBG00000021337) #34	ENSBBBG00000021355	SLC25A26 (ENSBBBG00000021384) #35
Cetacea	ANCESTRAL SPECIES	7	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873.z.a.a #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873.z.a.b #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873.z.a.b #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669.a #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00950000183306 #25	ENSGT00550000074840.y.a.d	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873.z.a.b #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669.a #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00950000183306 #25	ENSGT00550000074840.y.a.d	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873.z.a.b #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512
Beluga whale	MODERN SPECIES	28	FLNB (ENSDLEG00000003605) #8	DNASE1L3 (ENSDLEG00000015499) #9	ABHD6 (ENSDLEG00000015419) #10	RPP14 (ENSDLEG00000015401)	HTD2 (ENSDLEG00000015394) #12	ENSDLEG00000014951 #13	PDHB (ENSDLEG00000014718) #14	KCTD6 (ENSDLEG00000014694) #15	ACOX2 (ENSDLEG00000013864) #16	FAM107A (ENSDLEG00000013803) #18	FAM3D (ENSDLEG00000013752) #19	CFAP20DC (ENSDLEG00000013720) #20	ENSDLEG00000013694	ENSDLEG00000013683	ENSDLEG00000013657	PTPRG (ENSDLEG00000013533) #22	CUNH3orf14 (ENSDLEG00000013515) #23	FEZF2 (ENSDLEG00000013509) #24	CADPS (ENSDLEG00000013182)	ENSDLEG00000013121	SYNPR (ENSDLEG00000013106) #26	ENSDLEG00000013084 #27	C3orf49 (ENSDLEG00000013067) #28	ENSDLEG00000013022 #29	ATXN7 (ENSDLEG00000012953) #30	PSMD6 (ENSDLEG00000012939) #31	PRICKLE2 (ENSDLEG00000012899) #32	ADAMTS9 (ENSDLEG00000010763) #33	MAGI1 (ENSDLEG00000008577) #34	ENSDLEG00000008167	SLC25A26 (ENSDLEG00000008090) #35
Narwhal	MODERN SPECIES	310	SLMAP (ENSMMNG00015014760) #7	FLNB (ENSMMNG00015015248) #8	DNASE1L3 (ENSMMNG00015015517) #9	ABHD6 (ENSMMNG00015015546) #10	RPP14 (ENSMMNG00015015570)	HTD2 (ENSMMNG00015015587) #12	ENSMMNG00015015792 #13	PDHB (ENSMMNG00015016377) #14	KCTD6 (ENSMMNG00015016469) #15	ACOX2 (ENSMMNG00015015878) #16	FAM107A (ENSMMNG00015016044) #18	FAM3D (ENSMMNG00015016132) #19	CFAP20DC (ENSMMNG00015016237) #20	FHIT (ENSMMNG00015016528) #21	ENSMMNG00015016567	PTPRG (ENSMMNG00015016625) #22	C3orf14 (ENSMMNG00015016683) #23	FEZF2 (ENSMMNG00015016721) #24	CADPS (ENSMMNG00015016924) #25	ENSMMNG00015017570	SYNPR (ENSMMNG00015017647) #26	ENSMMNG00015017780 #27	C3orf49 (ENSMMNG00015017811) #28	THOC7 (ENSMMNG00015017848) #29	ATXN7 (ENSMMNG00015017959) #30	PSMD6 (ENSMMNG00015018161) #31	PRICKLE2 (ENSMMNG00015018213) #32	ADAMTS9 (ENSMMNG00015018336) #33	MAGI1 (ENSMMNG00015018757) #34	SLC25A26 (ENSMMNG00015019127) #35	LRIG1 (ENSMMNG00015019175) #36
Vaquita	MODERN SPECIES	2	SLMAP (ENSPSNG00000020431) #7	FLNB (ENSPSNG00000020226) #8	DNASE1L3 (ENSPSNG00000020015) #9	ABHD6 (ENSPSNG00000019942) #10	HTD2 (ENSPSNG00000019905) #12	ENSPSNG00000019364 #13	PDHB (ENSPSNG00000019176) #14	KCTD6 (ENSPSNG00000019141) #15	ACOX2 (ENSPSNG00000019095) #16	FAM107A (ENSPSNG00000018991) #18	FAM3D (ENSPSNG00000018707) #19	CFAP20DC (ENSPSNG00000018627) #20	ENSPSNG00000018598	FHIT (ENSPSNG00000018518) #21	ENSPSNG00000018481	PTPRG (ENSPSNG00000017965) #22	C3orf14 (ENSPSNG00000017899) #23	FEZF2 (ENSPSNG00000017856) #24	CADPS (ENSPSNG00000016609) #25	ENSPSNG00000016417	SYNPR (ENSPSNG00000016116) #26	ENSPSNG00000015956 #27	C3orf49 (ENSPSNG00000015853) #28	THOC7 (ENSPSNG00000015780) #29	ATXN7 (ENSPSNG00000015407) #30	PSMD6 (ENSPSNG00000015223) #31	PRICKLE2 (ENSPSNG00000015122) #32	ADAMTS9 (ENSPSNG00000014985) #33	MAGI1 (ENSPSNG00000013508) #34	SLC25A26 (ENSPSNG00000013259) #35	LRIG1 (ENSPSNG00000013173) #36
Dolphin	MODERN SPECIES	824																PTPRG (ENSTTRG00000002584) #22	C3orf14 (ENSTTRG00000002586) #23	FEZF2 (ENSTTRG00000002587) #24	ENSTTRG00000002588
Sperm whale	MODERN SPECIES	9	ARF4 (ENSPCTG00005021877)	DENND6A (ENSPCTG00005021848)	SLMAP (ENSPCTG00005020734) #7	FLNB (ENSPCTG00005018918) #8	DNASE1L3 (ENSPCTG00005018549) #9	ABHD6 (ENSPCTG00005018490) #10	RPP14 (ENSPCTG00005018446)	HTD2 (ENSPCTG00005018425) #12	PXK (ENSPCTG00005017606) #13	PDHB (ENSPCTG00005017374) #14	KCTD6 (ENSPCTG00005017323) #15	ACOX2 (ENSPCTG00005017046) #16	FAM107A (ENSPCTG00005016933) #18	CFAP20DC (ENSPCTG00005016620) #20	FHIT (ENSPCTG00005016501) #21	PTPRG (ENSPCTG00005016403) #22	C18H3orf14 (ENSPCTG00005016343) #23	FEZF2 (ENSPCTG00005016129) #24	CADPS (ENSPCTG00005014546) #25	SYNPR (ENSPCTG00005014237) #26	SNTN (ENSPCTG00005014164) #27	C3orf49 (ENSPCTG00005013993) #28	THOC7 (ENSPCTG00005013878) #29	ATXN7 (ENSPCTG00005013360) #30	PSMD6 (ENSPCTG00005013205) #31	PRICKLE2 (ENSPCTG00005013097) #32	ADAMTS9 (ENSPCTG00005012968) #33	MAGI1 (ENSPCTG00005011987) #34	SLC25A26 (ENSPCTG00005011855) #35	LRIG1 (ENSPCTG00005011798) #36	KBTBD8 (ENSPCTG00005011753) #37
Blue whale	MODERN SPECIES	2	DNASE1L3 (ENSBMSG00010010512) #9	ABHD6 (ENSBMSG00010010527) #10	HTD2 (ENSBMSG00010010553) #12	PXK (ENSBMSG00010010621) #13	PDHB (ENSBMSG00010010799) #14	KCTD6 (ENSBMSG00010010831) #15	ACOX2 (ENSBMSG00010010847) #16	FAM107A (ENSBMSG00010010894) #18	FAM3D (ENSBMSG00010010935) #19	ENSBMSG00010013854 #20	ENSBMSG00010013875 #20	ENSBMSG00010013910 #20	ENSBMSG00010013952	FHIT (ENSBMSG00010014004) #21	ENSBMSG00010014084	PTPRG (ENSBMSG00010014239) #22	C3orf14 (ENSBMSG00010014539) #23	FEZF2 (ENSBMSG00010014587) #24	CADPS (ENSBMSG00010014814) #25	SYNPR (ENSBMSG00010015614) #26	ENSBMSG00010015743	SNTN (ENSBMSG00010015768) #27	C3orf49 (ENSBMSG00010015790) #28	ENSBMSG00010015826 #29	ATXN7 (ENSBMSG00010015874) #30	PSMD6 (ENSBMSG00010015926) #31	PRICKLE2 (ENSBMSG00010015955) #32	ADAMTS9 (ENSBMSG00010016033) #33	MAGI1 (ENSBMSG00010016192) #34	SLC25A26 (ENSBMSG00010018085) #35	LRIG1 (ENSBMSG00010018168) #36
Suina	ANCESTRAL SPECIES	1	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Chacoan peccary	MODERN SPECIES	950	FLNB (ENSCWAG00000021626) #8	DNASE1L3 (ENSCWAG00000021660) #9	ABHD6 (ENSCWAG00000021669) #10	RPP14 (ENSCWAG00000021672)	HTD2 (ENSCWAG00000021674) #12	PXK (ENSCWAG00000021686) #13	PDHB (ENSCWAG00000021808) #14	KCTD6 (ENSCWAG00000021815) #15	ACOX2 (ENSCWAG00000021819) #16	FAM107A (ENSCWAG00000021832) #18	FAM3D (ENSCWAG00000021839) #19	ENSCWAG00000021841 #20	ENSCWAG00000011856 #20	ENSCWAG00000011875	FHIT (ENSCWAG00000011930) #21	PTPRG (ENSCWAG00000012014) #22	C3orf14 (ENSCWAG00000012118) #23	FEZF2 (ENSCWAG00000012160) #24	CADPS (ENSCWAG00000012263) #25	SYNPR (ENSCWAG00000013911) #26	SNTN (ENSCWAG00000014159) #27	C3orf49 (ENSCWAG00000014198) #28	THOC7 (ENSCWAG00000014303) #29	ATXN7 (ENSCWAG00000014420) #30	PSMD6 (ENSCWAG00000014720) #31	PRICKLE2 (ENSCWAG00000014815) #32	ADAMTS9 (ENSCWAG00000014975) #33	MAGI1 (ENSCWAG00000015706) #34	SLC25A26 (ENSCWAG00000017276) #35	LRIG1 (ENSCWAG00000017334) #36	KBTBD8 (ENSCWAG00000017384) #37
Pig	MODERN SPECIES	4	SLMAP (ENSSSCG00000038873) #7	FLNB (ENSSSCG00000011471) #8	DNASE1L3 (ENSSSCG00000032019) #9	ABHD6 (ENSSSCG00000011470) #10	HTD2 (ENSSSCG00000035452) #12	PXK (ENSSSCG00000011474) #13	PDHB (ENSSSCG00000025881) #14	KCTD6 (ENSSSCG00000022131) #15	ACOX2 (ENSSSCG00000011477) #16	ENSSSCG00000033189 #19	CFAP20DC (ENSSSCG00000011482) #20	ENSSSCG00000042396	FHIT (ENSSSCG00000035818) #21	ENSSSCG00000050599	ENSSSCG00000054111	PTPRG (ENSSSCG00000011485) #22	C3orf14 (ENSSSCG00000011486) #23	FEZF2 (ENSSSCG00000011487) #24	ENSSSCG00000011489	SYNPR (ENSSSCG00000027617) #26	SNTN (ENSSSCG00000011492) #27	C3orf49 (ENSSSCG00000011490) #28	THOC7 (ENSSSCG00000011491) #29	ATXN7 (ENSSSCG00000011493) #30	PSMD6 (ENSSSCG00000011494) #31	PRICKLE2 (ENSSSCG00000011495) #32	ADAMTS9 (ENSSSCG00000011496) #33	ENSSSCG00000047543	MAGI1 (ENSSSCG00000011497) #34	SLC25A26 (ENSSSCG00000011498) #35	LRIG1 (ENSSSCG00000011499) #36
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Carnivora	ANCESTRAL SPECIES	6	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Caniformia	ANCESTRAL SPECIES	4	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00630000090979	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00630000090979	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Ursidae	ANCESTRAL SPECIES	11	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000163089.b.k.d	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00910000148820	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00950000185438	ENSGT00550000074950 #35
Ursus	ANCESTRAL SPECIES	89	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000163089.b.k.d	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00630000090979	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00950000185438	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Polar bear	MODERN SPECIES	251	ENSUMAG00000022158 #8	ENSUMAG00000023083 #8	DNASE1L3 (ENSUMAG00000023124) #9	ABHD6 (ENSUMAG00000023128) #10	RPP14 (ENSUMAG00000023130)	HTD2 (ENSUMAG00000023134) #12	PXK (ENSUMAG00000023178) #13	PDHB (ENSUMAG00000023268) #14	ENSUMAG00000023271	KCTD6 (ENSUMAG00000023272) #15	ACOX2 (ENSUMAG00000023278) #16	FAM107A (ENSUMAG00000023320) #18	FAM3D (ENSUMAG00000023325) #19	CFAP20DC (ENSUMAG00000023336) #20	ENSUMAG00000023355	PTPRG (ENSUMAG00000023396) #22	ENSUMAG00000023495	C3orf14 (ENSUMAG00000023496) #23	ENSUMAG00000023498	ENSUMAG00000023502	SYNPR (ENSUMAG00000023503) #26	SNTN (ENSUMAG00000023507) #27	C3orf49 (ENSUMAG00000023511) #28	ENSUMAG00000023513 #29	ENSUMAG00000023514	ATXN7 (ENSUMAG00000023518) #30	ENSUMAG00000023522 #31	ENSUMAG00000023532 #33	MAGI1 (ENSUMAG00000023561) #34	ENSUMAG00000023661	SLC25A26 (ENSUMAG00000023664) #35
American black bear	MODERN SPECIES	3077																PTPRG (ENSUAMG00000009369) #22	ENSUAMG00000010042
Giant Panda	MODERN SPECIES	14	FLNB (ENSAMEG00000011883) #8	ENSAMEG00000028857	DNASE1L3 (ENSAMEG00000011952) #9	ABHD6 (ENSAMEG00000011973) #10	HTD2 (ENSAMEG00000030181) #12	PXK (ENSAMEG00000012000) #13	PDHB (ENSAMEG00000012042) #14	ENSAMEG00000014747	KCTD6 (ENSAMEG00000012064) #15	ACOX2 (ENSAMEG00000012066) #16	FAM107A (ENSAMEG00000012112) #18	FAM3D (ENSAMEG00000012119) #19	CFAP20DC (ENSAMEG00000012130) #20	ENSAMEG00000017139	ENSAMEG00000028134	PTPRG (ENSAMEG00000015376) #22	ENSAMEG00000030770	ENSAMEG00000024667	C3orf14 (ENSAMEG00000024752) #23	FEZF2 (ENSAMEG00000029919) #24	CADPS (ENSAMEG00000015310) #25	SYNPR (ENSAMEG00000024916) #26	SNTN (ENSAMEG00000015296) #27	C3orf49 (ENSAMEG00000015295) #28	THOC7 (ENSAMEG00000015287) #29	ATXN7 (ENSAMEG00000015260) #30	PSMD6 (ENSAMEG00000015235) #31	PRICKLE2 (ENSAMEG00000007612) #32	ADAMTS9 (ENSAMEG00000007511) #33	MAGI1 (ENSAMEG00000014617) #34	ENSAMEG00000027547
Mustelinae	ANCESTRAL SPECIES	18	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Ferret	MODERN SPECIES	163	ARF4 (ENSMPUG00000016871)	DENND6A (ENSMPUG00000016873)	SLMAP (ENSMPUG00000016875) #7	FLNB (ENSMPUG00000016876) #8	DNASE1L3 (ENSMPUG00000016877) #9	ABHD6 (ENSMPUG00000016878) #10	RPP14 (ENSMPUG00000016880)	PXK (ENSMPUG00000016881) #13	PDHB (ENSMPUG00000016896) #14	KCTD6 (ENSMPUG00000016899) #15	ACOX2 (ENSMPUG00000016900) #16	FAM107A (ENSMPUG00000016902) #18	FAM3D (ENSMPUG00000016903) #19	CFAP20DC (ENSMPUG00000016909) #20	ENSMPUG00000016910	PTPRG (ENSMPUG00000016911) #22	C3orf14 (ENSMPUG00000016914) #23	FEZF2 (ENSMPUG00000016916) #24	ENSMPUG00000016917	SYNPR (ENSMPUG00000016922) #26	SNTN (ENSMPUG00000016924) #27	C3orf49 (ENSMPUG00000016925) #28	THOC7 (ENSMPUG00000016928) #29	ATXN7 (ENSMPUG00000016932) #30	PSMD6 (ENSMPUG00000016933) #31	PRICKLE2 (ENSMPUG00000016934) #32	ADAMTS9 (ENSMPUG00000016936) #33	ENSMPUG00000016938	MAGI1 (ENSMPUG00000016939) #34	ENSMPUG00000016943	SLC25A26 (ENSMPUG00000016944) #35
American mink	MODERN SPECIES	80															ENSNVIG00000011949	PTPRG (ENSNVIG00000011803) #22	C3orf14 (ENSNVIG00000011751) #23	FEZF2 (ENSNVIG00000011725) #24	CADPS (ENSNVIG00000011647) #25	SYNPR (ENSNVIG00000011537) #26	SNTN (ENSNVIG00000011525) #27	C3orf49 (ENSNVIG00000011510) #28	THOC7 (ENSNVIG00000011462) #29	ATXN7 (ENSNVIG00000011425) #30	PSMD6 (ENSNVIG00000011381) #31	PRICKLE2 (ENSNVIG00000011360) #32	ADAMTS9 (ENSNVIG00000011223) #33	MAGI1 (ENSNVIG00000010985) #34	SAMC (ENSNVIG00000010947) #35	LRIG1 (ENSNVIG00000010896) #36	KBTB8 (ENSNVIG00000010879) #37
Canidae	ANCESTRAL SPECIES		ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00390000000378.d.b.eb.g.a.b	ENSGT00630000090979	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214.a #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00390000005052.s.a.a.b	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00390000000378.d.b.eb.g.a.b	ENSGT00630000090979	ENSGT00390000018085.a.b.a.c.a	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214.a #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00390000005052.s.a.a.b	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Dingo	MODERN SPECIES	401	DNASE1L3 (ENSCAFG00020010119) #9	ABHD6 (ENSCAFG00020010122) #10	RPP14 (ENSCAFG00020010128)	HTD2 (ENSCAFG00020010130) #12	PXK (ENSCAFG00020010131) #13	PDHB (ENSCAFG00020010134) #14	KCTD6 (ENSCAFG00020010154) #15	ACOX2 (ENSCAFG00020010158) #16	FAM107A (ENSCAFG00020010161) #18	FAM3D (ENSCAFG00020010163) #19	CFAP20DC (ENSCAFG00020010174) #20	ENSCAFG00020010214	ENSCAFG00020010221	ENSCAFG00020010226	ENSCAFG00020010227	PTPRG (ENSCAFG00020010252) #22	ENSCAFG00020010546	C3orf14 (ENSCAFG00020010549) #23	FEZF2 (ENSCAFG00020010552) #24	ENSCAFG00020010590	SYNPR (ENSCAFG00020010764) #26	SNTN (ENSCAFG00020010778) #27	C3orf49 (ENSCAFG00020010782) #28	THOC7 (ENSCAFG00020010785) #29	ATXN7 (ENSCAFG00020010789) #30	PSMD6 (ENSCAFG00020010838) #31	PRICKLE2 (ENSCAFG00020010850) #32	ADAMTS9 (ENSCAFG00020010936) #33	MAGI1 (ENSCAFG00020011230) #34	ENSCAFG00020011579	SLC25A26 (ENSCAFG00020011583) #35
Dog	MODERN SPECIES	12	FLNB (ENSCAFG00845020721) #8	DNASE1L3 (ENSCAFG00845020523) #9	ABHD6 (ENSCAFG00845020446) #10	HTD2 (ENSCAFG00845020286) #12	PXK (ENSCAFG00845019503) #13	PDHB (ENSCAFG00845019154) #14	KCTD6 (ENSCAFG00845019061) #15	ACOX2 (ENSCAFG00845018826) #16	FAM107A (ENSCAFG00845018733) #18	FAM3D (ENSCAFG00845018633) #19	CFAP20DC (ENSCAFG00845018102) #20	FHIT (ENSCAFG00845017871) #21	ENSCAFG00845015351	ENSCAFG00845015296	ENSCAFG00845015252	PTPRG (ENSCAFG00845015120) #22	ENSCAFG00845015023 #23	FEZF2 (ENSCAFG00845014997) #24	ENSCAFG00845014108	SYNPR (ENSCAFG00845013755) #26	SNTN (ENSCAFG00845013709) #27	C20H3orf49 (ENSCAFG00845013688) #28	THOC7 (ENSCAFG00845013663) #29	ATXN7 (ENSCAFG00845013551) #30	PSMD6 (ENSCAFG00845013485) #31	PRICKLE2 (ENSCAFG00845013396) #32	ADAMTS9 (ENSCAFG00845012850) #33	MAGI1 (ENSCAFG00845012111) #34	SLC25A26 (ENSCAFG00845011731) #35	LRIG1 (ENSCAFG00845011565) #36	KBTBD8 (ENSCAFG00845011463) #37
Red fox	MODERN SPECIES	5	DNASE1L3 (ENSVVUG00000016103) #9	ABHD6 (ENSVVUG00000016097) #10	ENSVVUG00000016087	PXK (ENSVVUG00000015499) #13	PDHB (ENSVVUG00000015465) #14	KCTD6 (ENSVVUG00000015462) #15	ACOX2 (ENSVVUG00000015454) #16	FAM107A (ENSVVUG00000015450) #18	ENSVVUG00000015434 #19	ENSVVUG00000015431	CFAP20DC (ENSVVUG00000015388) #20	ENSVVUG00000015358	ENSVVUG00000015339	ENSVVUG00000015330	ENSVVUG00000015322	PTPRG (ENSVVUG00000014881) #22	CUNH3orf14 (ENSVVUG00000014835) #23	FEZF2 (ENSVVUG00000014834) #24	ENSVVUG00000014819	SYNPR (ENSVVUG00000014802) #26	SNTN (ENSVVUG00000014798) #27	CUNH3orf49 (ENSVVUG00000014791) #28	ENSVVUG00000014789	THOC7 (ENSVVUG00000014787) #29	ATXN7 (ENSVVUG00000014784) #30	PSMD6 (ENSVVUG00000014782) #31	PRICKLE2 (ENSVVUG00000014773) #32	ADAMTS9 (ENSVVUG00000014705) #33	ENSVVUG00000014685	MAGI1 (ENSVVUG00000014645) #34	ENSVVUG00000014619
Felidae	ANCESTRAL SPECIES	17	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00950000185179	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00910000148820	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
leopard	MODERN SPECIES	57	SLMAP (ENSPPRG00000012264) #7	FLNB (ENSPPRG00000017735) #8	DNASE1L3 (ENSPPRG00000018907) #9	ABHD6 (ENSPPRG00000019460) #10	RPP14 (ENSPPRG00000019524)	HTD2 (ENSPPRG00000020475) #12	PXK (ENSPPRG00000024622) #13	PDHB (ENSPPRG00000024464) #14	KCTD6 (ENSPPRG00000024342) #15	ACOX2 (ENSPPRG00000024320) #16	FAM107A (ENSPPRG00000024198) #18	FAM3D (ENSPPRG00000024157) #19	CFAP20DC (ENSPPRG00000023339) #20	FHIT (ENSPPRG00000023211) #21	ENSPPRG00000023202	PTPRG (ENSPPRG00000022761) #22	C3orf14 (ENSPPRG00000000662) #23	FEZF2 (ENSPPRG00000001538) #24	ENSPPRG00000002698	ENSPPRG00000003102	SYNPR (ENSPPRG00000003285) #26	SNTN (ENSPPRG00000003698) #27	C3orf49 (ENSPPRG00000003956) #28	THOC7 (ENSPPRG00000004022) #29	ENSPPRG00000004069	ATXN7 (ENSPPRG00000004611) #30	PSMD6 (ENSPPRG00000005003) #31	PRICKLE2 (ENSPPRG00000005251) #32	ADAMTS9 (ENSPPRG00000005550) #33	MAGI1 (ENSPPRG00000007510) #34	SLC25A26 (ENSPPRG00000007884) #35
lion	MODERN SPECIES	2	DENND6A (ENSPLOG00000005683)	SLMAP (ENSPLOG00000006112) #7	FLNB (ENSPLOG00000007173) #8	DNASE1L3 (ENSPLOG00000008238) #9	ABHD6 (ENSPLOG00000008364) #10	RPP14 (ENSPLOG00000008418)	HTD2 (ENSPLOG00000008454) #12	PXK (ENSPLOG00000008543) #13	PDHB (ENSPLOG00000008742) #14	KCTD6 (ENSPLOG00000008883) #15	ACOX2 (ENSPLOG00000008935) #16	FAM107A (ENSPLOG00000009114) #18	FAM3D (ENSPLOG00000009293) #19	CFAP20DC (ENSPLOG00000009506) #20	FHIT (ENSPLOG00000009665) #21	PTPRG (ENSPLOG00000000124) #22	ENSPLOG00000000178	C3orf14 (ENSPLOG00000000186) #23	FEZF2 (ENSPLOG00000000192) #24	CADPS (ENSPLOG00000000293) #25	SYNPR (ENSPLOG00000000626) #26	SNTN (ENSPLOG00000000688) #27	C3orf49 (ENSPLOG00000000710) #28	THOC7 (ENSPLOG00000000726) #29	ATXN7 (ENSPLOG00000000770) #30	PSMD6 (ENSPLOG00000000825) #31	PRICKLE2 (ENSPLOG00000000862) #32	ADAMTS9 (ENSPLOG00000000956) #33	MAGI1 (ENSPLOG00000001257) #34	SLC25A26 (ENSPLOG00000001581) #35	LRIG1 (ENSPLOG00000001605) #36
Tiger	MODERN SPECIES	202	DNASE1L3 (ENSPTIG00000020975) #9	ABHD6 (ENSPTIG00000020605) #10	RPP14 (ENSPTIG00000020506)	HTD2 (ENSPTIG00000004999) #12	PXK (ENSPTIG00000016629) #13	PDHB (ENSPTIG00000012719) #14	KCTD6 (ENSPTIG00000012043) #15	ACOX2 (ENSPTIG00000011237) #16	FAM107A (ENSPTIG00000010190) #18	FAM3D (ENSPTIG00000009620) #19	ENSPTIG00000008509 #20	ENSPTIG00000008176 #20	FHIT (ENSPTIG00000006722) #21	ENSPTIG00000005768	ENSPTIG00000005591	PTPRG (ENSPTIG00000019869) #22	C3orf14 (ENSPTIG00000019782) #23	FEZF2 (ENSPTIG00000018609) #24	CADPS (ENSPTIG00000013364) #25	SYNPR (ENSPTIG00000012400) #26	SNTN (ENSPTIG00000011995) #27	C3orf49 (ENSPTIG00000011510) #28	THOC7 (ENSPTIG00000010860) #29	ATXN7 (ENSPTIG00000008113) #30	PSMD6 (ENSPTIG00000006635) #31	PRICKLE2 (ENSPTIG00000005351) #32	ADAMTS9 (ENSPTIG00000019849) #33
Cat	MODERN SPECIES	1	SLMAP (ENSFCAG00000030822) #7	FLNB (ENSFCAG00000006518) #8	ENSFCAG00000049756	DNASE1L3 (ENSFCAG00000006522) #9	ABHD6 (ENSFCAG00000006524) #10	RPP14 (ENSFCAG00000033032)	HTD2 (ENSFCAG00000040350) #12	PXK (ENSFCAG00000006526) #13	PDHB (ENSFCAG00000002206) #14	KCTD6 (ENSFCAG00000023632) #15	ACOX2 (ENSFCAG00000002210) #16	FAM107A (ENSFCAG00000031113) #18	FAM3D (ENSFCAG00000006529) #19	CFAP20DC (ENSFCAG00000031444) #20	FHIT (ENSFCAG00000033312) #21	PTPRG (ENSFCAG00000006340) #22	ENSFCAG00000034355	C3orf14 (ENSFCAG00000045830) #23	FEZF2 (ENSFCAG00000012726) #24	CADPS (ENSFCAG00000012727)	SYNPR (ENSFCAG00000038136) #26	SNTN (ENSFCAG00000003859) #27	C3orf49 (ENSFCAG00000000570) #28	THOC7 (ENSFCAG00000023008) #29	ATXN7 (ENSFCAG00000031292) #30	PSMD6 (ENSFCAG00000000573) #31	PRICKLE2 (ENSFCAG00000012183) #32	ADAMTS9 (ENSFCAG00000001564) #33	MAGI1 (ENSFCAG00000009340) #34	SLC25A26 (ENSFCAG00000003149) #35	LRIG1 (ENSFCAG00000003151) #36
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00910000148820	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35
Equus	ANCESTRAL SPECIES	5	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00910000148820	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Horse	MODERN SPECIES	7	SLMAP (ENSECAG00000019132) #7	FLNB (ENSECAG00000015849) #8	ENSECAG00000042823	DNASE1L3 (ENSECAG00000015857) #9	ABHD6 (ENSECAG00000007024) #10	HTD2 (ENSECAG00000052171) #12	PDHB (ENSECAG00000005244) #14	PXK (ENSECAG00000021069) #13	KCTD6 (ENSECAG00000000409) #15	ACOX2 (ENSECAG00000011932) #16	FAM107A (ENSECAG00000009135) #18	FAM3D (ENSECAG00000018836) #19	CFAP20DC (ENSECAG00000011861) #20	ENSECAG00000049939	ENSECAG00000028174	PTPRG (ENSECAG00000007607) #22	C16H3orf14 (ENSECAG00000001334) #23	FEZF2 (ENSECAG00000021037) #24	CADPS (ENSECAG00000014486) #25	SYNPR (ENSECAG00000011166) #26	SNTN (ENSECAG00000049202) #27	C16H3orf49 (ENSECAG00000010234) #28	THOC7 (ENSECAG00000000497) #29	ATXN7 (ENSECAG00000024801) #30	PSMD6 (ENSECAG00000021193) #31	PRICKLE2 (ENSECAG00000018642) #32	ADAMTS9 (ENSECAG00000019880) #33	MAGI1 (ENSECAG00000016431) #34	SLC25A26 (ENSECAG00000015020) #35	LRIG1 (ENSECAG00000009328) #36	KBTBD8 (ENSECAG00000007088) #37
Donkey	MODERN SPECIES	13	DENND6A (ENSEASG00005000843)	SLMAP (ENSEASG00005001149) #7	FLNB (ENSEASG00005001198) #8	ENSEASG00005033149	DNASE1L3 (ENSEASG00005001234) #9	ABHD6 (ENSEASG00005001247) #10	HTD2 (ENSEASG00005034841) #12	PXK (ENSEASG00005001264) #13	PDHB (ENSEASG00005001281) #14	KCTD6 (ENSEASG00005030299) #15	ACOX2 (ENSEASG00005001306) #16	FAM107A (ENSEASG00005001406) #18	FAM3D (ENSEASG00005001408) #19	CFAP20DC (ENSEASG00005001417) #20	FHIT (ENSEASG00005034025) #21	PTPRG (ENSEASG00005001438) #22	ENSEASG00005001443	C3orf14 (ENSEASG00005028011) #23	FEZF2 (ENSEASG00005001451) #24	CADPS (ENSEASG00005001465) #25	SYNPR (ENSEASG00005001493) #26	SNTN (ENSEASG00005033677) #27	C3orf49 (ENSEASG00005001501) #28	THOC7 (ENSEASG00005001507) #29	ATXN7 (ENSEASG00005001537) #30	PSMD6 (ENSEASG00005001544) #31	PRICKLE2 (ENSEASG00005001555) #32	ADAMTS9 (ENSEASG00005001635) #33	MAGI1 (ENSEASG00005001878) #34	SLC25A26 (ENSEASG00005001893) #35	LRIG1 (ENSEASG00005001905) #36
Chiroptera	ANCESTRAL SPECIES	49	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Microchiroptera	ANCESTRAL SPECIES	47	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Microbat	DUPLICATION
Microbat	MODERN SPECIES	992											ENSMLUG00000023896	ENSMLUG00000013987	ENSMLUG00000029464	ENSMLUG00000009394	ENSMLUG00000027488	ENSMLUG00000025423 #22	ENSMLUG00000014413 #22	C3orf14 (ENSMLUG00000027268) #23	FEZF2 (ENSMLUG00000007639) #24	ENSMLUG00000007649	ENSMLUG00000024127	SYNPR (ENSMLUG00000005177) #26	SNTN (ENSMLUG00000005191) #27	ENSMLUG00000025810	ENSMLUG00000005523	C3orf49 (ENSMLUG00000012051) #28	ENSMLUG00000012060 #29	ATXN7 (ENSMLUG00000014221) #30	PSMD6 (ENSMLUG00000014226) #31	PRICKLE2 (ENSMLUG00000026532) #32	ADAMTS9 (ENSMLUG00000014168) #33
Microbat	MODERN SPECIES	992										ENSMLUG00000023896	ENSMLUG00000013987	ENSMLUG00000029464	ENSMLUG00000009394	ENSMLUG00000027488	ENSMLUG00000025423 #22	ENSMLUG00000014413 #22	C3orf14 (ENSMLUG00000027268) #23	FEZF2 (ENSMLUG00000007639) #24	ENSMLUG00000007649	ENSMLUG00000024127	SYNPR (ENSMLUG00000005177) #26	SNTN (ENSMLUG00000005191) #27	ENSMLUG00000025810	ENSMLUG00000005523	C3orf49 (ENSMLUG00000012051) #28	ENSMLUG00000012060 #29	ATXN7 (ENSMLUG00000014221) #30	PSMD6 (ENSMLUG00000014226) #31	PRICKLE2 (ENSMLUG00000026532) #32	ADAMTS9 (ENSMLUG00000014168) #33	MAGI1 (ENSMLUG00000000633) #34
Greater horseshoe bat	MODERN SPECIES	8	DENND6A (ENSRFEG00010005389)	SLMAP (ENSRFEG00010006232) #7	FLNB (ENSRFEG00010007736) #8	DNASE1L3 (ENSRFEG00010008397) #9	ABHD6 (ENSRFEG00010008494) #10	RPP14 (ENSRFEG00010008545)	HTD2 (ENSRFEG00010008586) #12	PXK (ENSRFEG00010008633) #13	PDHB (ENSRFEG00010009165) #14	KCTD6 (ENSRFEG00010009284) #15	ACOX2 (ENSRFEG00010009311) #16	FAM107A (ENSRFEG00010009358) #18	FAM3D (ENSRFEG00010009429) #19	CFAP20DC (ENSRFEG00010009470) #20	FHIT (ENSRFEG00010009725) #21	PTPRG (ENSRFEG00010009803) #22	C3orf14 (ENSRFEG00010010285) #23	FEZF2 (ENSRFEG00010010350) #24	ENSRFEG00010010393	CADPS (ENSRFEG00010010542) #25	SYNPR (ENSRFEG00010011126) #26	SNTN (ENSRFEG00010011418) #27	THOC7 (ENSRFEG00010011747) #29	ATXN7 (ENSRFEG00010011808) #30	PSMD6 (ENSRFEG00010011978) #31	PRICKLE2 (ENSRFEG00010012124) #32	ADAMTS9 (ENSRFEG00010012302) #33	MAGI1 (ENSRFEG00010012442) #34	RPL39_1 (ENSRFEG00010013864)	SLC25A26 (ENSRFEG00010013884) #35	LRIG1 (ENSRFEG00010013972) #36
Megabat	MODERN SPECIES	1103																PTPRG (ENSPVAG00000003000) #22	C3orf14 (ENSPVAG00000003006) #23	FEZF2 (ENSPVAG00000003007) #24	ENSPVAG00000003008
Atlantogenata	ANCESTRAL SPECIES	56	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512
Xenarthra	ANCESTRAL SPECIES	355																ENSGT00940000155048 #22	ENSGT00940000160100 #24	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33
Sloth	MODERN SPECIES	3674																PTPRG (ENSCHOG00000011457) #22
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	4444										ENSDNOG00000041526	ENSDNOG00000034602	ENSDNOG00000040778	ENSDNOG00000041456	ENSDNOG00000048131	ENSDNOG00000035433 #22	ENSDNOG00000043288 #22	FEZF2 (ENSDNOG00000033694) #24	CADPS (ENSDNOG00000019227) #25	ENSDNOG00000037833	SYNPR (ENSDNOG00000040982) #26	SNTN (ENSDNOG00000048429) #27	ENSDNOG00000048643	C3orf49 (ENSDNOG00000005908) #28	ENSDNOG00000005917 #29	ATXN7 (ENSDNOG00000005843) #30	PSMD6 (ENSDNOG00000046209) #31	PRICKLE2 (ENSDNOG00000016963) #32	ADAMTS9 (ENSDNOG00000014115) #33
Armadillo	MODERN SPECIES	4444											ENSDNOG00000041526	ENSDNOG00000034602	ENSDNOG00000040778	ENSDNOG00000041456	ENSDNOG00000048131	ENSDNOG00000035433 #22	ENSDNOG00000043288 #22	FEZF2 (ENSDNOG00000033694) #24	CADPS (ENSDNOG00000019227) #25	ENSDNOG00000037833	SYNPR (ENSDNOG00000040982) #26	SNTN (ENSDNOG00000048429) #27	ENSDNOG00000048643	C3orf49 (ENSDNOG00000005908) #28	ENSDNOG00000005917 #29	ATXN7 (ENSDNOG00000005843) #30	PSMD6 (ENSDNOG00000046209) #31	PRICKLE2 (ENSDNOG00000016963) #32	ADAMTS9 (ENSDNOG00000014115) #33
Afrotheria	ANCESTRAL SPECIES	63	ENSGT00940000156297	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34
Tenrec	MODERN SPECIES	4025																ENSETEG00000013917 #22
Afrotheria_a	ANCESTRAL SPECIES	61	ENSGT00940000156297	ENSGT00390000005529.a	ENSGT00940000157660 #7	ENSGT00940000156286.pb #8	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00950000183306 #25	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34
Elephant	MODERN SPECIES	49	DENND6A (ENSLAFG00000003914)	SLMAP (ENSLAFG00000000245) #7	FLNB (ENSLAFG00000006278) #8	DNASE1L3 (ENSLAFG00000006296) #9	ABHD6 (ENSLAFG00000016818) #10	RPP14 (ENSLAFG00000031481)	PXK (ENSLAFG00000002929) #13	PDHB (ENSLAFG00000002931) #14	KCTD6 (ENSLAFG00000022622) #15	ACOX2 (ENSLAFG00000027265) #16	FAM107A (ENSLAFG00000027601) #18	FAM3D (ENSLAFG00000003733) #19	CFAP20DC (ENSLAFG00000009835) #20	ENSLAFG00000030021	ENSLAFG00000004111	PTPRG (ENSLAFG00000015768) #22	C3orf14 (ENSLAFG00000010537) #23	FEZF2 (ENSLAFG00000022425) #24	CADPS (ENSLAFG00000010539) #25	SYNPR (ENSLAFG00000018746) #26	ENSLAFG00000010388 #27	THOC7 (ENSLAFG00000001987) #29	ENSLAFG00000032573 #30	PSMD6 (ENSLAFG00000000036) #31	PRICKLE2 (ENSLAFG00000000039) #32	ADAMTS9 (ENSLAFG00000011498) #33	MAGI1 (ENSLAFG00000018125) #34
Hyrax	MODERN SPECIES	3342																PTPRG (ENSPCAG00000016263) #22
Marsupialia	ANCESTRAL SPECIES	14	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000163977	ENSGT00950000182965.a.b.b.a.a.a.a.b.b	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873.c #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Marsupialia_b	ANCESTRAL SPECIES	14	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000163977	ENSGT00950000182965.a.b.b.a.a.a.a.b.b	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873.c #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Diprotodontia	ANCESTRAL SPECIES	12	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00950000182965.a.b.b.a.a.a.a.b.b	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873.c #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Diprotodontia_a	ANCESTRAL SPECIES	10	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109.o #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00950000182965.a.b.b.a.a.a.a.b.b	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873.c #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Common wonbat	MODERN SPECIES	1012	ENSVURG00010004062	DNASE1L3 (ENSVURG00010004073) #9	ABHD6 (ENSVURG00010004113) #10	RPP14 (ENSVURG00010004122)	ENSVURG00010004130 #12	PXK (ENSVURG00010004160) #13	PDHB (ENSVURG00010004455) #14	KCTD6 (ENSVURG00010004491) #15	ACOX2 (ENSVURG00010004517) #16	FAM107A (ENSVURG00010004527) #18	FAM3D (ENSVURG00010004538) #19	CFAP20DC (ENSVURG00010004687) #20	ENSVURG00010004775	ENSVURG00010004808	ENSVURG00010004856	PTPRG (ENSVURG00010004969) #22	ENSVURG00010004992 #23	FEZF2 (ENSVURG00010005007) #24	ENSVURG00010005137	SYNPR (ENSVURG00010005907) #26	SNTN (ENSVURG00010005958) #27	C3orf49 (ENSVURG00010005993) #28	ENSVURG00010006017 #29	ATXN7 (ENSVURG00010006027) #30	PSMD6 (ENSVURG00010006048) #31	PRICKLE2 (ENSVURG00010006134) #32	ADAMTS9 (ENSVURG00010006187) #33	MAGI1 (ENSVURG00010006288) #34	ENSVURG00010006497	SLC25A26 (ENSVURG00010006536) #35	LRIG1 (ENSVURG00010006601) #36
koala	MODERN SPECIES	293															ENSPCIG00000031268	PTPRG (ENSPCIG00000012770) #22	ENSPCIG00000012767 #23	FEZF2 (ENSPCIG00000012765) #24	ENSPCIG00000012751	SYNPR (ENSPCIG00000012745) #26	SNTN (ENSPCIG00000012744) #27
Wallaby	MODERN SPECIES	5218																ENSMEUG00000012106 #22
Tasmanian devil	MODERN SPECIES		FLNB (ENSSHAG00000004199) #8	ENSSHAG00000026769	DNASE1L3 (ENSSHAG00000006068) #9	ABHD6 (ENSSHAG00000007204) #10	RPP14 (ENSSHAG00000031484)	PXK (ENSSHAG00000007751) #13	HTD2 (ENSSHAG00000029328) #12	PDHB (ENSSHAG00000030926) #14	KCTD6 (ENSSHAG00000024301) #15	ACOX2 (ENSSHAG00000009080) #16	ENSSHAG00000024622 #18	FAM3D (ENSSHAG00000003169) #19	CFAP20DC (ENSSHAG00000005793) #20	FHIT (ENSSHAG00000030893) #21	ENSSHAG00000022090	PTPRG (ENSSHAG00000017902) #22	ENSSHAG00000018343 #23	FEZF2 (ENSSHAG00000027636) #24	ENSSHAG00000018442	SYNPR (ENSSHAG00000030353) #26	SNTN (ENSSHAG00000009729) #27	C3orf49 (ENSSHAG00000011430) #28	THOC7 (ENSSHAG00000011615) #29	ATXN7 (ENSSHAG00000012231) #30	PSMD6 (ENSSHAG00000012357) #31	PRICKLE2 (ENSSHAG00000013056) #32	ADAMTS9 (ENSSHAG00000014822) #33	MAGI1 (ENSSHAG00000017371) #34	SLC25A26 (ENSSHAG00000024838) #35	LRIG1 (ENSSHAG00000011408) #36	KBTBD8 (ENSSHAG00000032152) #37
Opossum	MODERN SPECIES	5	FLNB (ENSMODG00000002189) #8	ENSMODG00000028639	DNASE1L3 (ENSMODG00000002269) #9	ABHD6 (ENSMODG00000002333) #10	RPP14 (ENSMODG00000002344)	HTD2 (ENSMODG00000041764) #12	PXK (ENSMODG00000002378) #13	PDHB (ENSMODG00000002398) #14	KCTD6 (ENSMODG00000048497) #15	FAM3D (ENSMODG00000002406) #19	CFAP20DC (ENSMODG00000002419) #20	ENSMODG00000029766	ENSMODG00000024453	ENSMODG00000002580	ENSMODG00000049978	PTPRG (ENSMODG00000002722) #22	ENSMODG00000025512 #23	FEZF2 (ENSMODG00000002738) #24	CADPS (ENSMODG00000002901) #25	ENSMODG00000039038	SYNPR (ENSMODG00000002954) #26	SNTN (ENSMODG00000050561) #27	C3orf49 (ENSMODG00000002989) #28	ENSMODG00000003009 #29	ATXN7 (ENSMODG00000025517) #30	PSMD6 (ENSMODG00000003074) #31	PRICKLE2 (ENSMODG00000003090) #32	ADAMTS9 (ENSMODG00000003140) #33	ENSMODG00000038875	MAGI1 (ENSMODG00000003153) #34	ENSMODG00000027650
Platypus	MODERN SPECIES	84	FLNB (ENSOANG00000013849) #8	ENSOANG00000047153	DNASE1L3 (ENSOANG00000050327) #9	ENSOANG00000051039	ABHD6 (ENSOANG00000049067) #10	ENSOANG00000040726	HTD2 (ENSOANG00000044016) #12	PXK (ENSOANG00000012932) #13	PDHB (ENSOANG00000022190) #14	KCTD6 (ENSOANG00000047869) #15	ACOX2 (ENSOANG00000022188) #16	ENSOANG00000038535 #18	FAM3D (ENSOANG00000001686) #19	ENSOANG00000042553	ENSOANG00000050573	PTPRG (ENSOANG00000006011) #22	ENSOANG00000043273 #23	FEZF2 (ENSOANG00000006012) #24	ENSOANG00000006013	SYNPR (ENSOANG00000001762) #26	C3orf49 (ENSOANG00000000242) #28	THOC7 (ENSOANG00000050840) #29	ATXN7 (ENSOANG00000044322) #30	PRICKLE2 (ENSOANG00000011930) #32	ADAMTS9 (ENSOANG00000002273) #33	MAGI1 (ENSOANG00000030734) #34	SLC25A26 (ENSOANG00000021347) #35	ENSOANG00000012850	LRIG1 (ENSOANG00000012379) #36	KBTBD8 (ENSOANG00000005913) #37	SUCLG2 (ENSOANG00000001375)
Sauria	ANCESTRAL SPECIES	13	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00630000090979	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000173126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35
Lepidosauria	ANCESTRAL SPECIES	14	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000173126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35
tuatara	MODERN SPECIES	839															ENSSPUG00000011381	PTPRG (ENSSPUG00000011400) #22	C3orf14 (ENSSPUG00000011429) #23	FEZF2 (ENSSPUG00000011442) #24	ENSSPUG00000011450	ENSSPUG00000011469	ENSSPUG00000011473	ENSSPUG00000011479	SYNPR (ENSSPUG00000011487) #26	SNTN (ENSSPUG00000011498) #27	THOC7 (ENSSPUG00000011505) #29	ENSSPUG00000011528 #30	ATXN7 (ENSSPUG00000011533) #30	PSMD6 (ENSSPUG00000011548) #31	PRICKLE2 (ENSSPUG00000011565) #32	ADAMTS9 (ENSSPUG00000011629) #33	MAGI1 (ENSSPUG00000011816) #34
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000047225.e.a.b #10	ENSGT00510000047225.e.a.a #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000173126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000154836	ENSGT00510000047225.e.a.b.c #10	ENSGT00510000047225.e.a.a #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT01030000237505	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Common wall lizard	MODERN SPECIES	10	KCTD6 (ENSPMRG00000013629) #15	ACOX2 (ENSPMRG00000013621) #16	FAM107A (ENSPMRG00000013615) #18	FAM3D (ENSPMRG00000013607) #19	CFAP20DC (ENSPMRG00000013595) #20	ENSPMRG00000013590	ENSPMRG00000013585	ENSPMRG00000013581	ENSPMRG00000013569	ENSPMRG00000013561	ENSPMRG00000013552	ENSPMRG00000013548	ENSPMRG00000013542	ENSPMRG00000013540	ENSPMRG00000013533	PTPRG (ENSPMRG00000013512) #22	C3orf14 (ENSPMRG00000013506) #23	FEZF2 (ENSPMRG00000013500) #24	ENSPMRG00000013379	SYNPR (ENSPMRG00000013363) #26	C3orf49 (ENSPMRG00000013360) #28	ENSPMRG00000013351 #29	ATXN7 (ENSPMRG00000013343) #30	PSMD6 (ENSPMRG00000013339) #31	PRICKLE2 (ENSPMRG00000013321) #32	ADAMTS9 (ENSPMRG00000013103) #33	ENSPMRG00000013047	MAGI1 (ENSPMRG00000012579) #34	ENSPMRG00000012519	ENSPMRG00000012518	ENSPMRG00000012517
Argentine black and white tegu	MODERN SPECIES	30	HTD2 (ENSSMRG00000017322) #12	ENSSMRG00000017324	PXK (ENSSMRG00000017325) #13	PDHB (ENSSMRG00000017327) #14	KCTD6 (ENSSMRG00000017328) #15	ACOX2 (ENSSMRG00000017330) #16	FAM107A (ENSSMRG00000017331) #18	FAM3D (ENSSMRG00000017332) #19	CFAP20DC (ENSSMRG00000017334) #20	ENSSMRG00000017336	ENSSMRG00000017340	ENSSMRG00000017344	ENSSMRG00000017345	ENSSMRG00000017349	ENSSMRG00000017352	PTPRG (ENSSMRG00000017361) #22	C3orf14 (ENSSMRG00000017365) #23	FEZF2 (ENSSMRG00000017366) #24	ENSSMRG00000017371	SYNPR (ENSSMRG00000017386) #26	SNTN (ENSSMRG00000017390) #27	THOC7 (ENSSMRG00000017403) #29	ATXN7 (ENSSMRG00000017404) #30	PSMD6 (ENSSMRG00000017409) #31	PRICKLE2 (ENSSMRG00000000017) #32	ADAMTS9 (ENSSMRG00000000159) #33	MAGI1 (ENSSMRG00000000667) #34	ENSSMRG00000000733	SLC25A26 (ENSSMRG00000000770) #35	LRIG1 (ENSSMRG00000000805) #36	KBTBD8 (ENSSMRG00000000879) #37
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000047225.e.a.b #10	ENSGT00510000047225.e.a.a #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000173126	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000154836	ENSGT00510000047225.e.a.b.a #10	ENSGT00510000047225.e.a.b.b #10	ENSGT00940000154715.b.k.b.a.a.a.b.a.b.a.a.a.a.b.a.a.a.a.a.a.b.d.a	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Indian cobra	MODERN SPECIES	1	ENSNNAG00000003065	ENSNNAG00000003080	ENSNNAG00000003095	RPP14 (ENSNNAG00000003101)	PXK (ENSNNAG00000003116) #13	PDHB (ENSNNAG00000003128) #14	KCTD6 (ENSNNAG00000003141) #15	ACOX2 (ENSNNAG00000003161) #16	FAM107A (ENSNNAG00000003195) #18	FAM3D (ENSNNAG00000003223) #19	ENSNNAG00000003287 #20	ENSNNAG00000003297 #20	ENSNNAG00000003319	ENSNNAG00000003324	ENSNNAG00000003339	PTPRG (ENSNNAG00000003369) #22	C3orf14 (ENSNNAG00000003478) #23	FEZF2 (ENSNNAG00000003488) #24	ENSNNAG00000003563	SYNPR (ENSNNAG00000004217) #26	SNTN (ENSNNAG00000004265) #27	THOC7 (ENSNNAG00000004290) #29	ATXN7 (ENSNNAG00000004394) #30	PSMD6 (ENSNNAG00000004451) #31	PRICKLE2 (ENSNNAG00000004484) #32	ADAMTS9 (ENSNNAG00000004589) #33	MAGI1 (ENSNNAG00000004958) #34	ENSNNAG00000005526	SLC25A26 (ENSNNAG00000005554) #35	ENSNNAG00000005679 #36	KBTBD8 (ENSNNAG00000005697) #37
Elapidae_a	ANCESTRAL SPECIES	8				ENSGT00940000154715.b.k.b.a.a.a.b.a.b.a.a.a.a.b.a.a.a.a.a.a.b.d.a	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Acanthophiinae	ANCESTRAL SPECIES	10			ENSGT00940000154715.b.k.b.a.a.a.b.a.b.a.a.a.a.b.a.a.a.a.a.a.b.d.a	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00990000213253	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00630000090979	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Eastern brown snake	MODERN SPECIES	3		ENSPTXG00000002422	ENSPTXG00000002424	ENSPTXG00000002425	RPP14 (ENSPTXG00000002426)	HTD2 (ENSPTXG00000002429) #12	PXK (ENSPTXG00000002430) #13	PDHB (ENSPTXG00000002433) #14	KCTD6 (ENSPTXG00000002434) #15	ACOX2 (ENSPTXG00000002438) #16	FAM107A (ENSPTXG00000002453) #18	FAM3D (ENSPTXG00000002455) #19	ENSPTXG00000002464	CFAP20DC (ENSPTXG00000002465) #20	ENSPTXG00000002469	PTPRG (ENSPTXG00000002471) #22	C3orf14 (ENSPTXG00000002472) #23	FEZF2 (ENSPTXG00000002474) #24	ENSPTXG00000002475	ENSPTXG00000002477	SYNPR (ENSPTXG00000002481) #26	SNTN (ENSPTXG00000002496) #27	THOC7 (ENSPTXG00000002499) #29	ATXN7 (ENSPTXG00000002502) #30	PSMD6 (ENSPTXG00000002506) #31	PRICKLE2 (ENSPTXG00000002510) #32	ENSPTXG00000002518 #33	ENSPTXG00000002527 #33	MAGI1 (ENSPTXG00000002562) #34	SLC25A26 (ENSPTXG00000002815) #35	LRIG1 (ENSPTXG00000002859) #36
Mainland tiger snake	MODERN SPECIES	2														ENSNSUG00000008507	ENSNSUG00000008506	PTPRG (ENSNSUG00000007761) #22	C3orf14 (ENSNSUG00000007754) #23	FEZF2 (ENSNSUG00000007753) #24	ENSNSUG00000007664	ENSNSUG00000007659	SYNPR (ENSNSUG00000007657) #26	SNTN (ENSNSUG00000007655) #27	THOC7 (ENSNSUG00000007653) #29	ENSNSUG00000007652 #30	ENSNSUG00000007649 #30	PSMD6 (ENSNSUG00000007645) #31	PRICKLE2 (ENSNSUG00000007643) #32	ADAMTS9 (ENSNSUG00000007617) #33	MAGI1 (ENSNSUG00000007343) #34	ENSNSUG00000007339	SLC25A26 (ENSNSUG00000007291) #35
Blue-lipped sea krait	DUPLICATION
Blue-lipped sea krait	MODERN SPECIES	969																ENSLLTG00000004947 #22
Blue-lipped sea krait	MODERN SPECIES	5553																PTPRG (ENSLLTG00000008056) #22
Lizard	DUPLICATION
Lizard	MODERN SPECIES	1003												ENSACAG00000043428	ENSACAG00000037313	ENSACAG00000028441	ENSACAG00000044046	ENSACAG00000045124 #22
Lizard	MODERN SPECIES	824																PTPRG (ENSACAG00000001995) #22	C3orf14 (ENSACAG00000034709) #23	ENSACAG00000002338	FEZF2 (ENSACAG00000040907) #24	ENSACAG00000044340	ENSACAG00000002370	ENSACAG00000044262	SYNPR (ENSACAG00000036706) #26	ENSACAG00000043783	SNTN (ENSACAG00000037137) #27	ENSACAG00000037346	THOC7 (ENSACAG00000001152) #29	ATXN7 (ENSACAG00000001088) #30	PSMD6 (ENSACAG00000001021) #31	ENSACAG00000037699	PRICKLE2 (ENSACAG00000000943) #32
Archelosauria	ANCESTRAL SPECIES	17	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000173126	ENSGT00390000002873 #29	ENSGT00950000185997	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35
Cryptodira	ANCESTRAL SPECIES	17	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000173126	ENSGT00390000002873 #29	ENSGT00950000185997	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35
Testudinoidea	DUPLICATION
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048.w #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000173126	ENSGT00390000002873 #29	ENSGT00950000185997	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35
Emydidae	ANCESTRAL SPECIES	13	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048.w #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Three-toed box turtle	MODERN SPECIES	33	P4HTM (ENSTMTG00000005581)	ENSTMTG00000005631	ARIH2 (ENSTMTG00000005683)	SLC25A20 (ENSTMTG00000005880)	PRKAR2A (ENSTMTG00000005904)	RPP14 (ENSTMTG00000005929)	HTD2 (ENSTMTG00000005947) #12	PXK (ENSTMTG00000005961) #13	PDHB (ENSTMTG00000006005) #14	KCTD6 (ENSTMTG00000006036) #15	ACOX2 (ENSTMTG00000006059) #16	FAM107A (ENSTMTG00000006131) #18	FAM3D (ENSTMTG00000013998) #19	CFAP20DC (ENSTMTG00000014034) #20	ENSTMTG00000014048	PTPRG (ENSTMTG00000014069) #22	C3orf14 (ENSTMTG00000014098) #23	FEZF2 (ENSTMTG00000014109) #24	ENSTMTG00000014120	ENSTMTG00000014140	SYNPR (ENSTMTG00000014199) #26	SNTN (ENSTMTG00000014239) #27	THOC7 (ENSTMTG00000014251) #29	ATXN7 (ENSTMTG00000014272) #30	PSMD6 (ENSTMTG00000014295) #31	PRICKLE2 (ENSTMTG00000014312) #32	ADAMTS9 (ENSTMTG00000014575) #33	MAGI1 (ENSTMTG00000016802) #34	ENSTMTG00000016884	SLC25A26 (ENSTMTG00000016891) #35	LRIG1 (ENSTMTG00000016908) #36
painted turtle	MODERN SPECIES	2383								P4HA2 (ENSCPBG00000025117)	ENSCPBG00000025128	FNIP1 (ENSCPBG00000025137)	RAPGEF6 (ENSCPBG00000025142)	FSTL4 (ENSCPBG00000025147)	C5orf15 (ENSCPBG00000025151)	VDAC1 (ENSCPBG00000025152)	ENSCPBG00000025159	PTPRG (ENSCPBG00000025269) #22	C3orf14 (ENSCPBG00000025917) #23	FEZF2 (ENSCPBG00000025918) #24	ENSCPBG00000025971	SYNPR (ENSCPBG00000026830) #26	SNTN (ENSCPBG00000026833) #27	THOC7 (ENSCPBG00000026834) #29	ENSCPBG00000026835	ATXN7 (ENSCPBG00000026836) #30	PSMD6 (ENSCPBG00000026839) #31	PRICKLE2 (ENSCPBG00000026844) #32	ENSCPBG00000026851 #33	ENSCPBG00000026862 #33	MAGI1 (ENSCPBG00000026871) #34	ENSCPBG00000026876	SLC25A26 (ENSCPBG00000026877) #35
Testudinidae	ANCESTRAL SPECIES	5	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048.w #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000173126	ENSGT00390000002873 #29	ENSGT00950000185997	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35
Goode s thornscrub tortoise	MODERN SPECIES	21	ENSGEVG00005008651	P4HTM (ENSGEVG00005008597)	ARIH2 (ENSGEVG00005008565)	SLC25A20 (ENSGEVG00005008545)	PRKAR2A (ENSGEVG00005008524)	RPP14 (ENSGEVG00005008471)	HTD2 (ENSGEVG00005008441) #12	PXK (ENSGEVG00005008278) #13	PDHB (ENSGEVG00005008227) #14	KCTD6 (ENSGEVG00005008209) #15	ACOX2 (ENSGEVG00005008113) #16	FAM107A (ENSGEVG00005008090) #18	FAM3D (ENSGEVG00005007833) #19	CFAP20DC (ENSGEVG00005007712) #20	ENSGEVG00005007656	PTPRG (ENSGEVG00005007503) #22	C3orf14 (ENSGEVG00005007456) #23	FEZF2 (ENSGEVG00005007428) #24	ENSGEVG00005007389	ENSGEVG00005007302	SYNPR (ENSGEVG00005007208) #26	ENSGEVG00005007182	ENSGEVG00005007158	THOC7 (ENSGEVG00005007138) #29	ATXN7 (ENSGEVG00005007114) #30	PSMD6 (ENSGEVG00005007090) #31	PRICKLE2 (ENSGEVG00005007020) #32	ADAMTS9 (ENSGEVG00005006238) #33	MAGI1 (ENSGEVG00005004948) #34	ENSGEVG00005004516	SLC25A26 (ENSGEVG00005004455) #35
Abingdon island giant tortoise	MODERN SPECIES	821	ENSCABG00000019723	ARIH2 (ENSCABG00000019724)	SLC25A20 (ENSCABG00000019725)	PRKAR2A (ENSCABG00000019726)	RPP14 (ENSCABG00000019727)	HTD2 (ENSCABG00000019728) #12	PXK (ENSCABG00000019729) #13	PDHB (ENSCABG00000019731) #14	KCTD6 (ENSCABG00000019733) #15	ACOX2 (ENSCABG00000019734) #16	FAM107A (ENSCABG00000019735) #18	FAM3D (ENSCABG00000019737) #19	ENSCABG00000019739 #20	ENSCABG00000019742 #20	ENSCABG00000019744	ENSCABG00000019749 #22	C3orf14 (ENSCABG00000019756) #23	FEZF2 (ENSCABG00000019759) #24	ENSCABG00000019762
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00940000155048.x #22
Testudinidae	ANCESTRAL SPECIES																	ENSGT00940000155048.x #22
Abingdon island giant tortoise	MODERN SPECIES	1100				ENSCABG00000000683	PPP1R9A (ENSCABG00000000689)	SGCE (ENSCABG00000000724)	ENSCABG00000001098	CASD1 (ENSCABG00000001104)	COL1A2 (ENSCABG00000001144)	ENSCABG00000001635	GNG11 (ENSCABG00000001636)	TFPI2 (ENSCABG00000001640)	CALCR (ENSCABG00000001655)	VPS50 (ENSCABG00000001918)	HEPACAM2 (ENSCABG00000002811)	ENSCABG00000002817 #22	CDK6 (ENSCABG00000002824)
Chinese turtle	MODERN SPECIES	1322	KANK4 (ENSPSIG00000016625)	ENSPSIG00000016872	PRKAR2A (ENSPSIG00000017020)	RPP14 (ENSPSIG00000017212)	HTD2 (ENSPSIG00000005016) #12	PXK (ENSPSIG00000005046) #13	PDHB (ENSPSIG00000005492) #14	KCTD6 (ENSPSIG00000005628) #15	ACOX2 (ENSPSIG00000005738) #16	ENSPSIG00000006377	FAM3D (ENSPSIG00000006380) #19	CFAP20DC (ENSPSIG00000006406) #20	ENSPSIG00000000970	FHIT (ENSPSIG00000007319) #21	ENSPSIG00000000982	PTPRG (ENSPSIG00000007338) #22	C3orf14 (ENSPSIG00000009749) #23	FEZF2 (ENSPSIG00000009757) #24	ENSPSIG00000009763
Archosauria	ANCESTRAL SPECIES	24	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00950000185997	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Australian saltwater crocodile	MODERN SPECIES	37	P4HTM (ENSCPRG00005016677)	ARIH2 (ENSCPRG00005016670)	SLC25A20 (ENSCPRG00005016620)	PRKAR2A (ENSCPRG00005016598)	HTD2 (ENSCPRG00005016591) #12	RPP14 (ENSCPRG00005016588)	PXK (ENSCPRG00005016582) #13	PDHB (ENSCPRG00005016540) #14	KCTD6 (ENSCPRG00005016528) #15	ACOX2 (ENSCPRG00005016518) #16	FAM107A (ENSCPRG00005016515) #18	FAM3D (ENSCPRG00005016509) #19	ENSCPRG00005016504 #20	ENSCPRG00005016496 #20	ENSCPRG00005016492	PTPRG (ENSCPRG00005016446) #22	C3orf14 (ENSCPRG00005016434) #23	ENSCPRG00005016336	SYNPR (ENSCPRG00005016305) #26	SNTN (ENSCPRG00005016304) #27	THOC7 (ENSCPRG00005016300) #29	ATXN7 (ENSCPRG00005016288) #30	PSMD6 (ENSCPRG00005016279) #31	ENSCPRG00005016274	PRICKLE2 (ENSCPRG00005016258) #32	ADAMTS9 (ENSCPRG00005016132) #33	MAGI1 (ENSCPRG00005015934) #34	ENSCPRG00005015898	SLC25A26 (ENSCPRG00005015895) #35	LRIG1 (ENSCPRG00005015894) #36	KBTBD8 (ENSCPRG00005015890) #37
Aves	ANCESTRAL SPECIES	29	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00950000185997	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Neognathae	ANCESTRAL SPECIES	27	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00950000185997	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Galloanserae	ANCESTRAL SPECIES	26	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37	ENSGT00940000164303
Anatidae	ANCESTRAL SPECIES	41	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37	ENSGT00940000164303
Pink-footed goose	MODERN SPECIES	91	P4HTM (ENSABRG00000018510)	ENSABRG00000018535	ARIH2 (ENSABRG00000018552)	SLC25A20 (ENSABRG00000018818)	PRKAR2A (ENSABRG00000018891)	RPP14 (ENSABRG00000018912)	HTD2 (ENSABRG00000018916) #12	PXK (ENSABRG00000019000) #13	ENSABRG00000019305 #14	KCTD6 (ENSABRG00000019307) #15	ACOX2 (ENSABRG00000019321) #16	FAM107A (ENSABRG00000000880) #18	FAM3D (ENSABRG00000001014) #19	CFAP20DC (ENSABRG00000001177) #20	FHIT (ENSABRG00000001781) #21	PTPRG (ENSABRG00000001987) #22	C3orf14 (ENSABRG00000002287) #23	FEZF2 (ENSABRG00000002354) #24	ENSABRG00000002463	SYNPR (ENSABRG00000002616) #26	SNTN (ENSABRG00000002685) #27	THOC7 (ENSABRG00000002714) #29	ATXN7 (ENSABRG00000002852) #30	PSMD6 (ENSABRG00000002968) #31	PRICKLE2 (ENSABRG00000003016) #32	ADAMTS9 (ENSABRG00000003094) #33	MAGI1 (ENSABRG00000003972) #34	ENSABRG00000004110	SLC25A26 (ENSABRG00000004131) #35	LRIG1 (ENSABRG00000004189) #36	KBTBD8 (ENSABRG00000005059) #37
Duck	MODERN SPECIES	4	P4HTM (ENSAPLG00000006841)	ARIH2 (ENSAPLG00000006502)	SLC25A20 (ENSAPLG00000029472)	PRKAR2A (ENSAPLG00000006277)	RPP14 (ENSAPLG00000006272)	HTD2 (ENSAPLG00000006269) #12	PXK (ENSAPLG00000005874) #13	ENSAPLG00000028332 #14	KCTD6 (ENSAPLG00000005871) #15	ACOX2 (ENSAPLG00000005757) #16	FAM107A (ENSAPLG00000005707) #18	FAM3D (ENSAPLG00000005464) #19	CFAP20DC (ENSAPLG00000005403) #20	ENSAPLG00000016636	ENSAPLG00000025191	PTPRG (ENSAPLG00000012378) #22	C3orf14 (ENSAPLG00000013146) #23	FEZF2 (ENSAPLG00000020979) #24	ENSAPLG00000002031	SYNPR (ENSAPLG00000003065) #26	SNTN (ENSAPLG00000003311) #27	THOC7 (ENSAPLG00000003317) #29	ATXN7 (ENSAPLG00000003397) #30	PSMD6 (ENSAPLG00000003464) #31	PRICKLE2 (ENSAPLG00000003962) #32	ADAMTS9 (ENSAPLG00000005973) #33	ENSAPLG00000027785	MAGI1 (ENSAPLG00000015151) #34	SLC25A26 (ENSAPLG00000015089) #35	LRIG1 (ENSAPLG00000014836) #36	KBTBD8 (ENSAPLG00000014724) #37
Phasianidae	ANCESTRAL SPECIES	16	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37	ENSGT00940000164303
Phasianidae_b	ANCESTRAL SPECIES	16	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37	ENSGT00940000164303
Chicken	MODERN SPECIES	3	ENSGALG00010020670	P4HTM (ENSGALG00010020684)	ENSGALG00010020695	ARIH2 (ENSGALG00010020732)	SLC25A20 (ENSGALG00010020754)	PRKAR2A (ENSGALG00010020764)	HTD2 (ENSGALG00010020806) #12	PXK (ENSGALG00010020880) #13	PDHB (ENSGALG00010020900) #14	KCTD6 (ENSGALG00010020905) #15	ACOX2 (ENSGALG00010020920) #16	FAM107A (ENSGALG00010020943) #18	FAM3D (ENSGALG00010020958) #19	CFAP20DC (ENSGALG00010020986) #20	FHIT (ENSGALG00010021016) #21	PTPRG (ENSGALG00010021043) #22	C12H3orf14 (ENSGALG00010021052) #23	FEZF2 (ENSGALG00010021054) #24	ENSGALG00010021078	SYP (ENSGALG00010021113) #26	SNTN (ENSGALG00010021119) #27	THOC7 (ENSGALG00010020141) #29	ATXN7 (ENSGALG00010020152) #30	PSMD6 (ENSGALG00010020179) #31	PRICKLE2 (ENSGALG00010020194) #32	ADAMTS9 (ENSGALG00010020246) #33	MAGI1 (ENSGALG00010020282) #34	SLC25A26 (ENSGALG00010019297) #35	LRIG1 (ENSGALG00010019323) #36	KBTBD8 (ENSGALG00010019650) #37	ENSGALG00010019696
Turkey	MODERN SPECIES	5	ENSMGAG00000008550	P4HTM (ENSMGAG00000008559)	ENSMGAG00000008569	ARIH2 (ENSMGAG00000008587)	SLC25A20 (ENSMGAG00000008643)	PRKAR2A (ENSMGAG00000008680)	RPP14 (ENSMGAG00000015512)	PXK (ENSMGAG00000008724) #13	PDHB (ENSMGAG00000008428) #14	KCTD6 (ENSMGAG00000008746) #15	ACOX2 (ENSMGAG00000008748) #16	FAM107A (ENSMGAG00000008795) #18	FAM3D (ENSMGAG00000008819) #19	CFAP20DC (ENSMGAG00000008832) #20	ENSMGAG00000021099	PTPRG (ENSMGAG00000008850) #22	C3orf14 (ENSMGAG00000008896) #23	ENSMGAG00000008911	SYNPR (ENSMGAG00000009030) #26	SNTN (ENSMGAG00000009047) #27	THOC7 (ENSMGAG00000009059) #29	ATXN7 (ENSMGAG00000009100) #30	PSMD6 (ENSMGAG00000009125) #31	PRICKLE2 (ENSMGAG00000009081) #32	ADAMTS9 (ENSMGAG00000009150) #33	MAGI1 (ENSMGAG00000009228) #34	SLC25A26 (ENSMGAG00000009255) #35	LRIG1 (ENSMGAG00000009269) #36	KBTBD8 (ENSMGAG00000022009) #37	ENSMGAG00000009302	SUCLG2 (ENSMGAG00000009310)
Japanese quail	MODERN SPECIES	3	P4HTM (ENSCJPG00005016743)	ENSCJPG00005016744	ARIH2 (ENSCJPG00005016745)	SLC25A20 (ENSCJPG00005016799)	PRKAR2A (ENSCJPG00005016800)	RPP14 (ENSCJPG00005016801)	HTD2 (ENSCJPG00005016802) #12	PXK (ENSCJPG00005016803) #13	PDHB (ENSCJPG00005016804) #14	KCTD6 (ENSCJPG00005016805) #15	ACOX2 (ENSCJPG00005016806) #16	FAM107A (ENSCJPG00005016807) #18	FAM3D (ENSCJPG00005016808) #19	CFAP20DC (ENSCJPG00005016809) #20	ENSCJPG00005016819	PTPRG (ENSCJPG00005016823) #22	C3orf14 (ENSCJPG00005016824) #23	FEZF2 (ENSCJPG00005016825) #24	ENSCJPG00005016828	SYNPR (ENSCJPG00005018030) #26	SNTN (ENSCJPG00005018031) #27	THOC7 (ENSCJPG00005018032) #29	ATXN7 (ENSCJPG00005018034) #30	PSMD6 (ENSCJPG00005018035) #31	PRICKLE2 (ENSCJPG00005018037) #32	ADAMTS9 (ENSCJPG00005018038) #33	MAGI1 (ENSCJPG00005018045) #34	SLC25A26 (ENSCJPG00005018055) #35	LRIG1 (ENSCJPG00005018060) #36	KBTBD8 (ENSCJPG00005018067) #37	ENSCJPG00005018069
Neognathae_b	ANCESTRAL SPECIES	18	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00950000185997	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Neognathae_c	ANCESTRAL SPECIES	21	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37	ENSGT00940000164303
Golden eagle	MODERN SPECIES	12	P4HTM (ENSACCG00020012539)	ENSACCG00020012568	ARIH2 (ENSACCG00020012611)	SLC25A20 (ENSACCG00020012666)	PRKAR2A (ENSACCG00020012703)	RPP14 (ENSACCG00020012728)	HTD2 (ENSACCG00020012755) #12	PXK (ENSACCG00020012820) #13	PDHB (ENSACCG00020012932) #14	KCTD6 (ENSACCG00020012941) #15	ACOX2 (ENSACCG00020012979) #16	FAM107A (ENSACCG00020013007) #18	FAM3D (ENSACCG00020013103) #19	CFAP20DC (ENSACCG00020013154) #20	ENSACCG00020013179	PTPRG (ENSACCG00020014073) #22	C3orf14 (ENSACCG00020014772) #23	FEZF2 (ENSACCG00020014787) #24	ENSACCG00020016282	SYNPR (ENSACCG00020016617) #26	SNTN (ENSACCG00020016624) #27	THOC7 (ENSACCG00020016628) #29	ATXN7 (ENSACCG00020016632) #30	PSMD6 (ENSACCG00020016638) #31	PRICKLE2 (ENSACCG00020016643) #32	ADAMTS9 (ENSACCG00020016650) #33	MAGI1 (ENSACCG00020016667) #34	SLC25A26 (ENSACCG00020016695) #35	LRIG1 (ENSACCG00020016703) #36	KBTBD8 (ENSACCG00020016709) #37	ENSACCG00020016712
Kakapo	MODERN SPECIES	3	WDR6 (ENSSHBG00005016352)	ENSSHBG00005016345	P4HTM (ENSSHBG00005016338)	ARIH2 (ENSSHBG00005016333)	SLC25A20 (ENSSHBG00005016329)	PRKAR2A (ENSSHBG00005016314)	HTD2 (ENSSHBG00005016298) #12	PXK (ENSSHBG00005016286) #13	PDHB (ENSSHBG00005016272) #14	KCTD6 (ENSSHBG00005016263) #15	ACOX2 (ENSSHBG00005016121) #16	FAM107A (ENSSHBG00005016102) #18	FAM3D (ENSSHBG00005016094) #19	CFAP20DC (ENSSHBG00005016082) #20	ENSSHBG00005016057	PTPRG (ENSSHBG00005016050) #22	C3orf14 (ENSSHBG00005016035) #23	FEZF2 (ENSSHBG00005016024) #24	ENSSHBG00005015047	SYNPR (ENSSHBG00005014888) #26	SNTN (ENSSHBG00005014875) #27	THOC7 (ENSSHBG00005014867) #29	ATXN7 (ENSSHBG00005014850) #30	PSMD6 (ENSSHBG00005014829) #31	PRICKLE2 (ENSSHBG00005014821) #32	ADAMTS9 (ENSSHBG00005014460) #33	MAGI1 (ENSSHBG00005014282) #34	SLC25A26 (ENSSHBG00005014260) #35	LRIG1 (ENSSHBG00005014201) #36	KBTBD8 (ENSSHBG00005014161) #37	ENSSHBG00005014152
Passeriformes	ANCESTRAL SPECIES	16	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00950000185179	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00950000185997	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Passeriformes_d	ANCESTRAL SPECIES	16	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00950000185179	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00950000185997	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00940000166512	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Passeriformes_g	ANCESTRAL SPECIES	16	ENSGT00390000014570	ENSGT00940000164203	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00950000185179	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00950000185997	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Passeroidea	ANCESTRAL SPECIES	16	ENSGT00390000014570	ENSGT00940000154875	ENSGT00940000157863	ENSGT00940000154836	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000163977	ENSGT00950000185179	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00390000002873 #29	ENSGT00950000185997	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Common canary	MODERN SPECIES	15	ARIH2 (ENSSCAG00000005865)	SLC25A20 (ENSSCAG00000005883)	PRKAR2A (ENSSCAG00000005901)	HTD2 (ENSSCAG00000005909) #12	ENSSCAG00000005914	PXK (ENSSCAG00000005953) #13	PDHB (ENSSCAG00000006180) #14	KCTD6 (ENSSCAG00000006187) #15	ACOX2 (ENSSCAG00000006188) #16	FAM107A (ENSSCAG00000006193) #18	FAM3D (ENSSCAG00000006195) #19	ENSSCAG00000006201 #20	ENSSCAG00000006207 #20	ENSSCAG00000006213	ENSSCAG00000006217	PTPRG (ENSSCAG00000006226) #22	C3orf14 (ENSSCAG00000006240) #23	FEZF2 (ENSSCAG00000006244) #24	ENSSCAG00000006382	SYNPR (ENSSCAG00000007215) #26	SNTN (ENSSCAG00000007220) #27	THOC7 (ENSSCAG00000007223) #29	ENSSCAG00000007232	ATXN7 (ENSSCAG00000007233) #30	PSMD6 (ENSSCAG00000007252) #31	PRICKLE2 (ENSSCAG00000007292) #32	ADAMTS9 (ENSSCAG00000007307) #33	MAGI1 (ENSSCAG00000007368) #34	SLC25A26 (ENSSCAG00000007630) #35	LRIG1 (ENSSCAG00000007642) #36	KBTBD8 (ENSSCAG00000007691) #37
Zebra finch	MODERN SPECIES	3	WDR6 (ENSTGUG00000009040)	ENSTGUG00000009077	P4HTM (ENSTGUG00000009060)	ARIH2 (ENSTGUG00000009080)	SLC25A20 (ENSTGUG00000009104)	PRKAR2A (ENSTGUG00000009123)	ENSTGUG00000009157	PXK (ENSTGUG00000009162) #13	PDHB (ENSTGUG00000009179) #14	KCTD6 (ENSTGUG00000009191) #15	ACOX2 (ENSTGUG00000009192) #16	FAM107A (ENSTGUG00000027669) #18	FAM3D (ENSTGUG00000009255) #19	CFAP20DC (ENSTGUG00000009261) #20	ENSTGUG00000026510	PTPRG (ENSTGUG00000009280) #22	FEZF2 (ENSTGUG00000021940) #24	C3orf14 (ENSTGUG00000026142) #23	ENSTGUG00000009352	SYNPR (ENSTGUG00000018356) #26	SNTN (ENSTGUG00000009426) #27	THOC7 (ENSTGUG00000009431) #29	ATXN7 (ENSTGUG00000009416) #30	PSMD6 (ENSTGUG00000009442) #31	PRICKLE2 (ENSTGUG00000009461) #32	ADAMTS9 (ENSTGUG00000009483) #33	MAGI1 (ENSTGUG00000009560) #34	SLC25A26 (ENSTGUG00000009590) #35	LRIG1 (ENSTGUG00000009604) #36	KBTBD8 (ENSTGUG00000009627) #37	ENSTGUG00000009630
Medium ground finch	MODERN SPECIES	20	P4HTM (ENSGFOG00000006438)	ENSGFOG00000006429	ARIH2 (ENSGFOG00000006421)	SLC25A20 (ENSGFOG00000006408)	PRKAR2A (ENSGFOG00000006375)	ENSGFOG00000006354	HTD2 (ENSGFOG00000006345) #12	PXK (ENSGFOG00000005061) #13	PDHB (ENSGFOG00000005020) #14	KCTD6 (ENSGFOG00000005013) #15	ACOX2 (ENSGFOG00000004999) #16	FAM107A (ENSGFOG00000004992) #18	FAM3D (ENSGFOG00000004969) #19	CFAP20DC (ENSGFOG00000004941) #20	ENSGFOG00000009016	PTPRG (ENSGFOG00000008759) #22	C3orf14 (ENSGFOG00000008730) #23	ENSGFOG00000006121	SYNPR (ENSGFOG00000006020) #26	SNTN (ENSGFOG00000006009) #27	THOC7 (ENSGFOG00000006002) #29	ATXN7 (ENSGFOG00000005996) #30	PSMD6 (ENSGFOG00000005991) #31	PRICKLE2 (ENSGFOG00000005985) #32	ADAMTS9 (ENSGFOG00000005699) #33	MAGI1 (ENSGFOG00000005601) #34	SLC25A26 (ENSGFOG00000005568) #35	LRIG1 (ENSGFOG00000005456) #36	KBTBD8 (ENSGFOG00000005432) #37	ENSGFOG00000005424	SUCLG2 (ENSGFOG00000005343)
Flycatcher	MODERN SPECIES	3	ARIH2 (ENSFALG00000013114)	SLC25A20 (ENSFALG00000013123)	PRKAR2A (ENSFALG00000023232)	RPP14 (ENSFALG00000013148)	HTD2 (ENSFALG00000023112) #12	PXK (ENSFALG00000013159) #13	PDHB (ENSFALG00000013169) #14	KCTD6 (ENSFALG00000029058) #15	ACOX2 (ENSFALG00000013192) #16	FAM107A (ENSFALG00000023435) #18	ENSFALG00000023249	ENSFALG00000028004	FAM3D (ENSFALG00000024598) #19	CFAP20DC (ENSFALG00000013205) #20	ENSFALG00000024618	PTPRG (ENSFALG00000013214) #22	C3orf14 (ENSFALG00000013220) #23	FEZF2 (ENSFALG00000013225) #24	ENSFALG00000013227	SYNPR (ENSFALG00000013235) #26	ENSFALG00000024803	THOC7 (ENSFALG00000013245) #29	ATXN7 (ENSFALG00000013254) #30	PSMD6 (ENSFALG00000013261) #31	PRICKLE2 (ENSFALG00000013263) #32	ADAMTS9 (ENSFALG00000013265) #33	MAGI1 (ENSFALG00000013283) #34	ENSFALG00000023566	SLC25A26 (ENSFALG00000013315) #35	LRIG1 (ENSFALG00000013324) #36	KBTBD8 (ENSFALG00000013332) #37
Great tit	MODERN SPECIES	3	ENSPMJG00000004934	ARIH2 (ENSPMJG00000004935)	SLC25A20 (ENSPMJG00000004945)	PRKAR2A (ENSPMJG00000004949)	HTD2 (ENSPMJG00000004951) #12	RPP14 (ENSPMJG00000004952)	PXK (ENSPMJG00000004956) #13	PDHB (ENSPMJG00000004971) #14	KCTD6 (ENSPMJG00000004981) #15	ACOX2 (ENSPMJG00000004983) #16	FAM107A (ENSPMJG00000004986) #18	FAM3D (ENSPMJG00000004987) #19	CFAP20DC (ENSPMJG00000004990) #20	ENSPMJG00000005000	ENSPMJG00000005008	PTPRG (ENSPMJG00000005009) #22	C3orf14 (ENSPMJG00000005013) #23	FEZF2 (ENSPMJG00000005019) #24	ENSPMJG00000005031	SYNPR (ENSPMJG00000005050) #26	SNTN (ENSPMJG00000005070) #27	THOC7 (ENSPMJG00000005073) #29	ATXN7 (ENSPMJG00000005075) #30	PSMD6 (ENSPMJG00000005080) #31	PRICKLE2 (ENSPMJG00000005105) #32	ADAMTS9 (ENSPMJG00000005116) #33	MAGI1 (ENSPMJG00000005138) #34	SLC25A26 (ENSPMJG00000005179) #35	LRIG1 (ENSPMJG00000005189) #36	KBTBD8 (ENSPMJG00000005200) #37	ENSPMJG00000005202
African ostrich	DUPLICATION
African ostrich	MODERN SPECIES	640	ENSSCUG00000008724	ENSSCUG00000008725	P4HTM (ENSSCUG00000008727)	ENSSCUG00000008736	ARIH2 (ENSSCUG00000008739)	SLC25A20 (ENSSCUG00000008742)	PRKAR2A (ENSSCUG00000008744)	HTD2 (ENSSCUG00000008746) #12	PXK (ENSSCUG00000008747) #13	PDHB (ENSSCUG00000008757) #14	KCTD6 (ENSSCUG00000008759) #15	ACOX2 (ENSSCUG00000008762) #16	FAM107A (ENSSCUG00000008764) #18	CFAP20DC (ENSSCUG00000008775) #20	ENSSCUG00000008786	ENSSCUG00000008791 #22	ENSSCUG00000008793	HGF (ENSSCUG00000008795)	CACNA2D1 (ENSSCUG00000008847)
African ostrich	MODERN SPECIES	756																PTPRG (ENSSCUG00000010481) #22	C3orf14 (ENSSCUG00000010488) #23	ENSSCUG00000010504	SYNPR (ENSSCUG00000010579) #26	SNTN (ENSSCUG00000010581) #27	THOC7 (ENSSCUG00000010585) #29	ATXN7 (ENSSCUG00000010590) #30	PSMD6 (ENSSCUG00000010593) #31	PRICKLE2 (ENSSCUG00000010599) #32	ADAMTS9 (ENSSCUG00000010695) #33	MAGI1 (ENSSCUG00000010757) #34	SLC25A26 (ENSSCUG00000010771) #35	LRIG1 (ENSSCUG00000010808) #36	KBTBD8 (ENSSCUG00000010827) #37	ENSSCUG00000010829	SUCLG2 (ENSSCUG00000010832)
Anura	ANCESTRAL SPECIES	52	ENSGT00940000157660 #7	ENSGT00940000156286 #8	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b #9	ENSGT00510000047225 #10	ENSGT00510000048121	ENSGT00530000065109 #12	ENSGT00390000017669 #13	ENSGT00940000155146 #14	ENSGT00940000157869 #15	ENSGT00940000160985 #16	ENSGT00390000011228.b.a #18	ENSGT00940000163282.e.a	ENSGT00950000183004.a.a.a.a #19	ENSGT00390000005497 #20	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00980000202009	ENSGT01010000229997	ENSGT00940000164126	ENSGT00390000007318 #28	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34
Leishan spiny toad	MODERN SPECIES	11	PXK (ENSLLEG00000025922) #13	PDHB (ENSLLEG00000025416) #14	KCTD6 (ENSLLEG00000025329) #15	ACOX2 (ENSLLEG00000023737) #16	FAM107A (ENSLLEG00000023599) #18	ENSLLEG00000023328	ENSLLEG00000023297	FAM3D (ENSLLEG00000023115) #19	ENSLLEG00000022798	ENSLLEG00000022740	ENSLLEG00000022720	ENSLLEG00000022700	ENSLLEG00000022685	ENSLLEG00000022592	ENSLLEG00000022574	PTPRG (ENSLLEG00000021000) #22	C3orf14 (ENSLLEG00000020885) #23	FEZF2 (ENSLLEG00000020750) #24	ENSLLEG00000020710	ENSLLEG00000020669	ENSLLEG00000017975	ENSLLEG00000017849	ENSLLEG00000017825	SYNPR (ENSLLEG00000017624) #26	SNTN (ENSLLEG00000017571) #27	ENSLLEG00000017546	ENSLLEG00000017503	C3orf49 (ENSLLEG00000017436) #28	ENSLLEG00000017334	ENSLLEG00000016992	THOC7 (ENSLLEG00000016877) #29
Frog	MODERN SPECIES	4	dennd6a (ENSXETG00000008657)	arf4 (ENSXETG00000008654)	pde12 (ENSXETG00000008653)	fam107a (ENSXETG00000046417) #18	MGC107780 (ENSXETG00000008638)	ENSXETG00000037278	ENSXETG00000048371	ENSXETG00000037274	fam3d (ENSXETG00000025698) #19	ENSXETG00000043914	cfap20dc (ENSXETG00000000564) #20	ENSXETG00000044867	ENSXETG00000047716	ENSXETG00000048395	ENSXETG00000044524	ptprg (ENSXETG00000033844) #22	C3orf14 (ENSXETG00000035030) #23	fezf2 (ENSXETG00000022248) #24	cadps (ENSXETG00000022243)	ENSXETG00000046743	ENSXETG00000048041	synpr (ENSXETG00000044908) #26	ENSXETG00000037421	ENSXETG00000038272	sntn (ENSXETG00000047790) #27	c3orf49 (ENSXETG00000006540) #28	thoc7 (ENSXETG00000006539) #29	mapk15 (ENSXETG00000006538) #30	psmd6 (ENSXETG00000006537) #31	prickle2 (ENSXETG00000006535) #32	ENSXETG00000042079
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	2306																ENSLACG00000003475 #22
Coelacanth	MODERN SPECIES	891																PTPRG (ENSLACG00000013658) #22	C3orf14 (ENSLACG00000013395) #23	FEZF2 (ENSLACG00000013316) #24	ENSLACG00000012693	ENSLACG00000010037	nampt2 (ENSLACG00000009065)	SYNPR (ENSLACG00000022543) #26	ENSLACG00000004206	THOC7 (ENSLACG00000003527) #29	ENSLACG00000002373 #30
Actinopterygii	ANCESTRAL SPECIES	14	ENSGT00940000156494	ENSGT00940000157928	ENSGT00390000013390	ENSGT00390000003017.c.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.b	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00390000011228.b.a #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a ##26	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000173126	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT00940000155820 #34	ENSGT00550000074950 #35
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	9	NT5DC2 (ENSECRG00000019645)	UQCC5 (ENSECRG00000019677)	PBRM1 (ENSECRG00000019732)	ENSECRG00000019913	ENSECRG00000019944	glt8d1 (ENSECRG00000013772)	spcs1 (ENSECRG00000013788)	nek4 (ENSECRG00000013827)	CAMK1 (ENSECRG00000013927)	ccdc3b (ENSECRG00000014043)	FAM107A (ENSECRG00000014165) #18	ENSECRG00000014187 ##19	cfap20dc (ENSECRG00000014236) #20	FHIT (ENSECRG00000014295) #21	ENSECRG00000014367	ENSECRG00000014424 #22	PTPRG (ENSECRG00000014476) #22	fezf2 (ENSECRG00000014533) #24	ENSECRG00000014574	nampt2 (ENSECRG00000014617)	SYNPR (ENSECRG00000014669) #26	SNTN (ENSECRG00000014716) #27	ENSECRG00000014753	thoc7 (ENSECRG00000014809) #29	ATXN7 (ENSECRG00000015061) #30	psmd6 (ENSECRG00000015115) #31	prickle2b (ENSECRG00000015265) #32	ADAMTS9 (ENSECRG00000015323) #33	magi1b (ENSECRG00000015537) #34	tmf1 (ENSECRG00000015721)	EOGT (ENSECRG00000015812)
Reedfish	MODERN SPECIES	9	UQCC5 (ENSECRG00000019677)	PBRM1 (ENSECRG00000019732)	ENSECRG00000019913	ENSECRG00000019944	glt8d1 (ENSECRG00000013772)	spcs1 (ENSECRG00000013788)	nek4 (ENSECRG00000013827)	CAMK1 (ENSECRG00000013927)	ccdc3b (ENSECRG00000014043)	FAM107A (ENSECRG00000014165) #18	ENSECRG00000014187 ##19	cfap20dc (ENSECRG00000014236) #20	FHIT (ENSECRG00000014295) #21	ENSECRG00000014367	ENSECRG00000014424 #22	PTPRG (ENSECRG00000014476) #22	fezf2 (ENSECRG00000014533) #24	ENSECRG00000014574	nampt2 (ENSECRG00000014617)	SYNPR (ENSECRG00000014669) #26	SNTN (ENSECRG00000014716) #27	ENSECRG00000014753	thoc7 (ENSECRG00000014809) #29	ATXN7 (ENSECRG00000015061) #30	psmd6 (ENSECRG00000015115) #31	prickle2b (ENSECRG00000015265) #32	ADAMTS9 (ENSECRG00000015323) #33	magi1b (ENSECRG00000015537) #34	tmf1 (ENSECRG00000015721)	EOGT (ENSECRG00000015812)	ENSECRG00000015870
Neopterygii	ANCESTRAL SPECIES	59				ENSGT00940000156494	ENSGT00940000157928	ENSGT00390000013390	ENSGT00390000003017.c.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00510000047967 #21	ENSGT00940000155048 #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a ##26	ENSGT01030000234637.b.d.b #26	ENSGT00390000003322 #27	ENSGT00940000173126	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000166173	ENSGT00940000153629.a.a #32	ENSGT00940000156409 #33	ENSGT01030000234549.a.a.a.a.a.b.b.a
Spotted gar	MODERN SPECIES	671	NISCH (ENSLOCG00000010609)	stab1 (ENSLOCG00000010584)	UQCC5 (ENSLOCG00000010575)	PBRM1 (ENSLOCG00000010556)	gnl3 (ENSLOCG00000010542)	glt8d1 (ENSLOCG00000010530)	spcs1 (ENSLOCG00000010522)	nek4 (ENSLOCG00000010516)	CAMK1 (ENSLOCG00000010502)	ccdc3b (ENSLOCG00000010493)	FAM107A (ENSLOCG00000010486) #18	ENSLOCG00000010476 ##19	cfap20dc (ENSLOCG00000010469) #20	ENSLOCG00000010463	ENSLOCG00000010456	ptprga (ENSLOCG00000010428) #22	C3orf14 (ENSLOCG00000010418) #23	fezf2 (ENSLOCG00000010412) #24	ENSLOCG00000010394	nampt2 (ENSLOCG00000010385)	SYNPR (ENSLOCG00000010367) #26	SNTN (ENSLOCG00000010361) #27	ENSLOCG00000010350	thoc7 (ENSLOCG00000010342) #29	ATXN7 (ENSLOCG00000010319) #30	psmd6 (ENSLOCG00000010311) #31	slc2a9l1 (ENSLOCG00000010306)	prickle2b (ENSLOCG00000010297) #32	ADAMTS9 (ENSLOCG00000010273) #33	rho (ENSLOCG00000018246)	magi1b (ENSLOCG00000010248) #34
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000155048.c #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000155048.c #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000155048.c #22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000155048.c #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000155048.c #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000155048.c #22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000155048.c #22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00940000155048.c #22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00940000155048.c #22
Tetraodontidae	ANCESTRAL SPECIES																	ENSGT00940000155048.c #22
Tetraodon	MODERN SPECIES	26	trib3 (ENSTNIG00000003586)	ENSTNIG00000003587	ENSTNIG00000004553	ENSTNIG00000003596	marchf5 (ENSTNIG00000003598)	cdc27 (ENSTNIG00000003599)	DTD2 (ENSTNIG00000001215)	ENSTNIG00000003608	ENSTNIG00000003609	ENSTNIG00000003618	ENSTNIG00000003620	ptrh2 (ENSTNIG00000001658)	ENSTNIG00000003624	ENSTNIG00000003628	ENSTNIG00000003629	ENSTNIG00000003632 #22	ANO8 (ENSTNIG00000003633)	ABHD8 (ENSTNIG00000003634)	ENSTNIG00000003635	olig1 (ENSTNIG00000003640)	olig2 (ENSTNIG00000003641)	tjp2a (ENSTNIG00000003642)	tjp2a (ENSTNIG00000003643)	SLC19A3 (ENSTNIG00000003644)	ENSTNIG00000003646	ENSTNIG00000000935	gc2 (ENSTNIG00000003648)	rasl11a (ENSTNIG00000003649)	ENSTNIG00000000300	ENSTNIG00000001269	ENSTNIG00000003652
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	85															ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a ##26	ENSGT00940000173126	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000166173	ENSGT00940000153629.a.a.b #32	ENSGT00940000156409 #33	ENSGT01030000234549.a.a.a.a.a.b.b.a	ENSGT00940000155820.a #34	ENSGT00550000074950 #35
Clupeocephala	ANCESTRAL SPECIES	95						ENSGT00550000074884	ENSGT00390000003017.c.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00390000011228.b.a.e.a #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a ##26	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000166173	ENSGT00940000153629.a.a.b #32	ENSGT00940000156409 #33	ENSGT00940000155820.a #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36	ENSGT00940000158653 #37
Euteleosteomorpha	ANCESTRAL SPECIES	5								ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00390000011228.b.a.e.a #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a ##26	ENSGT00940000164201.c.a	ENSGT00940000155686	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000166173	ENSGT00940000153629.a.a.b #32	ENSGT00940000156409 #33	ENSGT00940000155820.a #34	ENSGT00550000074950 #35
Protacanthopterygii	ANCESTRAL SPECIES	3	ENSGT00940000153217	ENSGT00940000156138.d	ENSGT00940000156792.g.a	ENSGT00940000154964.y.a.o	ENSGT00940000154964.y.a.p	ENSGT00940000160792	ENSGT00940000155806.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00390000011228.b.a.e.a #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a ##26	ENSGT00940000164201.c.a	ENSGT00940000155686	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000166173	ENSGT00940000153629.a.a.b #32	ENSGT00940000156409 #33	ENSGT01030000234549.a.a.a.a.a.b.b.a.b	ENSGT00940000155820.a #34
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1148															ENSGT00990000210161	ENSGT00940000155048.d.a.a #22	ENSGT00940000160100.c #24	ENSGT00590000083094.a.a.c.a.m
Salmoninae_a	ANCESTRAL SPECIES	25	ENSGT00940000153217.p	ENSGT00940000156138.d.e	ENSGT00940000156792.g.a.b	ENSGT00940000154964.y.a.o	ENSGT00940000160792.b	ENSGT00940000155806.c.b.c	ENSGT00940000158320.u	ENSGT00940000159273.g	ENSGT00390000018321.b	ENSGT00940000157448.l	ENSGT00940000156378.a.a.c	ENSGT00390000014429.a.f	ENSGT00390000011228.b.a.e.a.f #18	ENSGT00990000212636	ENSGT00990000210161	ENSGT00940000155048.d.a.a #22	ENSGT00940000160100.c #24	ENSGT00590000083094.a.a.c.a.m	ENSGT01030000234637.b.d.a.a.f ##26	ENSGT00390000002873.fb.b #29	ENSGT00940000157279.l #30	ENSGT00510000046608.B.q #31	ENSGT00940000153629.a.a.b.c #32	ENSGT00940000156409.e #33	ENSGT00940000155820.a.f.a #34	ENSGT00550000074950.b #35	ENSGT00940000158502.e #36	ENSGT00940000158653.k #37	ENSGT00940000164303.b.a.a	ENSGT00390000010170.a.a.a	ENSGT00940000163880
Salmo	ANCESTRAL SPECIES	6	ENSGT00940000153217.p	ENSGT00940000156138.d.e	ENSGT00940000156792.g.a.b	ENSGT00940000154964.y.a.o	ENSGT00940000157402.j	ENSGT00940000155806.c.b.c	ENSGT00940000158320.u	ENSGT00940000159273.g	ENSGT00390000018321.b	ENSGT00940000157448.l	ENSGT00940000156378.a.a.c	ENSGT00390000014429.a.f	ENSGT00390000011228.b.a.e.a.f #18	ENSGT00990000212636	ENSGT00990000210161	ENSGT00940000155048.d.a.a #22	ENSGT00940000160100.c #24	ENSGT00590000083094.a.a.c.a.m	ENSGT01030000234637.b.d.a.a.f ##26	ENSGT00390000002873.fb.b #29	ENSGT00940000157279.l #30	ENSGT00510000046608.B.q #31	ENSGT00940000153629.a.a.b.c #32	ENSGT00940000156409.e #33	ENSGT00940000155820.a.f.a #34	ENSGT00550000074950.b #35	ENSGT00940000158502.e #36	ENSGT00940000158653.k #37	ENSGT00940000164303.b.a.a	ENSGT00390000010170.a.a.a	ENSGT00940000162607.b.d
River trout	MODERN SPECIES	7	RAP1GAP (ENSSTUG00000034551)	SLC2A1 (ENSSTUG00000034982)	phc2b (ENSSTUG00000036183)	ENSSTUG00000036247	ANKS1A (ENSSTUG00000036271)	gnl3 (ENSSTUG00000036336)	glt8d1 (ENSSTUG00000036405)	spcs1 (ENSSTUG00000036504)	nek4 (ENSSTUG00000036518)	CAMK1 (ENSSTUG00000036570)	ccdc3b (ENSSTUG00000038549)	ENSSTUG00000038555 #18	ENSSTUG00000007418	ENSSTUG00000007672	ENSSTUG00000008451	ptprga (ENSSTUG00000009135) #22	fezf2 (ENSSTUG00000012873) #24	ENSSTUG00000012971	ENSSTUG00000015515 ##26	thoc7 (ENSSTUG00000015525) #29	ATXN7 (ENSSTUG00000015589) #30	psmd6 (ENSSTUG00000015628) #31	prickle2b (ENSSTUG00000015678) #32	ADAMTS9 (ENSSTUG00000015796) #33	magi1b (ENSSTUG00000017998) #34	slc25a26 (ENSSTUG00000018269) #35	LRIG1 (ENSSTUG00000018388) #36	kbtbd8 (ENSSTUG00000018803) #37	ENSSTUG00000018826	suclg2 (ENSSTUG00000018838)	ENSSTUG00000019110
Atlantic salmon	MODERN SPECIES	14	ENSSSAG00000078443	ENSSSAG00000078313	phc2b (ENSSSAG00000078282)	ENSSSAG00000089968	ENSSSAG00000078273	ENSSSAG00000078259	gnl3 (ENSSSAG00000078239)	glt8d1 (ENSSSAG00000078213)	spcs1 (ENSSSAG00000087655)	nek4 (ENSSSAG00000078205)	ENSSSAG00000077996	ccdc3b (ENSSSAG00000077949)	ENSSSAG00000117943 #18	ENSSSAG00000091093	ENSSSAG00000077929	ptprga (ENSSSAG00000076977) #22	FEZF2 (ENSSSAG00000103036) #24	ENSSSAG00000116955	ENSSSAG00000070239	SYNPR (ENSSSAG00000069971) ##26	thoc7 (ENSSSAG00000069963) #29	ATXN7 (ENSSSAG00000116622) #30	psmd6 (ENSSSAG00000069956) #31	prickle2b (ENSSSAG00000069924) #32	ADAMTS9 (ENSSSAG00000069386) #33	magi1b (ENSSSAG00000066736) #34	slc25a26 (ENSSSAG00000107083) #35	LRIG1 (ENSSSAG00000065112) #36	kbtbd8 (ENSSSAG00000065048) #37	suclg2 (ENSSSAG00000064004)	TAFA1 (ENSSSAG00000113299)
Oncorhynchus	ANCESTRAL SPECIES	5	ENSGT00940000153217.p	ENSGT00940000156138.d.e	ENSGT00940000156792.g.a.b	ENSGT00940000154964.y.a.o	ENSGT00940000160792.b	ENSGT00940000155806.c.b.c	ENSGT00940000158320.u	ENSGT00940000159273.g	ENSGT00390000018321.b	ENSGT00940000157448.l	ENSGT00940000156378.a.a.c	ENSGT00390000014429.a.f	ENSGT00390000011228.b.a.e.a.f #18	ENSGT00990000212636	ENSGT00990000210161	ENSGT00940000155048.d.a.a #22	ENSGT00940000160100.c #24	ENSGT00590000083094.a.a.c.a.m	ENSGT01030000234637.b.d.a.a.f ##26	ENSGT00390000002873.fb.a #29	ENSGT00940000157279.l #30	ENSGT00510000046608.B.q #31	ENSGT00940000153629.a.a.b.c #32	ENSGT00940000156409.e #33	ENSGT00940000155820.a.f.a #34	ENSGT00940000158502.e #36	ENSGT00940000158653.k #37	ENSGT00940000164303.b.a.a	ENSGT00390000010170.a.a.a	ENSGT00940000163880	ENSGT00940000159882.l
Oncorhynchus_a	ANCESTRAL SPECIES	4	ENSGT00940000153217.p	ENSGT00940000156138.d.e	ENSGT00940000156792.g.a.b	ENSGT00940000154964.y.a.o	ENSGT00940000160792.b	ENSGT00940000155806.c.b.c	ENSGT00940000158320.u	ENSGT00940000159273.g	ENSGT00390000018321.b	ENSGT00940000157448.l	ENSGT00940000156378.a.a.c	ENSGT00390000014429.a.f	ENSGT00390000011228.b.a.e.a.f #18	ENSGT00990000212636	ENSGT00990000210161	ENSGT00940000155048.d.a.a #22	ENSGT00940000160100.c #24	ENSGT00590000083094.a.a.c.a.m	ENSGT01030000234637.b.d.a.a.f ##26	ENSGT00390000002873.fb.a #29	ENSGT00940000157279.l #30	ENSGT00510000046608.B.q #31	ENSGT00940000153629.a.a.b.c #32	ENSGT00940000156409.e #33	ENSGT01050000247977	ENSGT00940000155820.a.f.a #34	ENSGT01000000220281	ENSGT00940000158502.e #36	ENSGT00940000158653.k #37	ENSGT00940000164303.b.a.a	ENSGT00390000010170.a.a.a
Chinook salmon	MODERN SPECIES	31	padi2 (ENSOTSG00005009204)	RAP1GAP (ENSOTSG00005005587)	SLC2A1 (ENSOTSG00005001022)	phc2b (ENSOTSG00005000931)	ENSOTSG00005000924	ENSOTSG00005000919	gnl3 (ENSOTSG00005000897)	glt8d1 (ENSOTSG00005000799)	spcs1 (ENSOTSG00005000682)	nek4 (ENSOTSG00005047577)	CAMK1 (ENSOTSG00005047413)	ccdc3b (ENSOTSG00005047403)	ENSOTSG00005047402 #18	ENSOTSG00005047401	ENSOTSG00005047400	ptprga (ENSOTSG00005047161) #22	fezf2 (ENSOTSG00005047159) #24	ENSOTSG00005047158	ENSOTSG00005043562	SYNPR (ENSOTSG00005043546) ##26	thoc7 (ENSOTSG00005043545) #29	ATXN7 (ENSOTSG00005043544) #30	psmd6 (ENSOTSG00005043543) #31	prickle2b (ENSOTSG00005043542) #32	ADAMTS9 (ENSOTSG00005043173) #33	ENSOTSG00005043165	magi1b (ENSOTSG00005043163) #34	ENSOTSG00005043161	LRIG1 (ENSOTSG00005042391) #36	kbtbd8 (ENSOTSG00005042384) #37	ENSOTSG00005042383
Coho salmon	MODERN SPECIES	25	ENSOKIG00005029485	gnl3 (ENSOKIG00005029458)	glt8d1 (ENSOKIG00005029419)	spcs1 (ENSOKIG00005029385)	nek4 (ENSOKIG00005029374)	CAMK1 (ENSOKIG00005028024)	ccdc3b (ENSOKIG00005027934)	ENSOKIG00005027916 #18	ENSOKIG00005027897	ENSOKIG00005027889	ENSOKIG00005027882	ENSOKIG00005027878	ENSOKIG00005027872	ENSOKIG00005027846	ENSOKIG00005027820	ptprga (ENSOKIG00005026994) #22	fezf2 (ENSOKIG00005026932) #24	ENSOKIG00005026910	ENSOKIG00005026107	SYNPR (ENSOKIG00005026015) ##26	thoc7 (ENSOKIG00005025990) #29	ATXN7 (ENSOKIG00005025974) #30	psmd6 (ENSOKIG00005025959) #31	ENSOKIG00005025947	prickle2b (ENSOKIG00005025920) #32	ADAMTS9 (ENSOKIG00005022360) #33	ENSOKIG00005022116	magi1b (ENSOKIG00005022063) #34	ENSOKIG00005020090	LRIG1 (ENSOKIG00005019137) #36	kbtbd8 (ENSOKIG00005019002) #37
Rainbow trout	MODERN SPECIES	28	glut1a (ENSOMYG00000017703)	phc2b (ENSOMYG00000017523)	ENSOMYG00000017478	gnl3 (ENSOMYG00000017409)	glt8d1 (ENSOMYG00000017368)	spcs1 (ENSOMYG00000017322)	nek4 (ENSOMYG00000017314)	ENSOMYG00000060735	camk1b (ENSOMYG00000014932)	ENSOMYG00000071390	ENSOMYG00000061535	ccdc3b (ENSOMYG00000014760)	ENSOMYG00000032587	ENSOMYG00000014752 #18	ENSOMYG00000014726	ptprga (ENSOMYG00000009393) #22	ENSOMYG00000051363	FEZF2 (ENSOMYG00000007850) #24	ENSOMYG00000007302	ENSOMYG00000068906	SYNPR (ENSOMYG00000006415) ##26	thoc7 (ENSOMYG00000006372) #29	ATXN7 (ENSOMYG00000006294) #30	psd6 (ENSOMYG00000006222) #31	prickle2b (ENSOMYG00000006067) #32	ADAMTS9 (ENSOMYG00000005611) #33	magi1b (ENSOMYG00000004634) #34	LRIG1 (ENSOMYG00000004475) #36	kbtbd8 (ENSOMYG00000004447) #37	ENSOMYG00000004410	suclg2 (ENSOMYG00000004187)
Huchen	MODERN SPECIES	291																ptprga (ENSHHUG00000006002) #22	fezf2 (ENSHHUG00000005993) #24	ENSHHUG00000005655	ENSHHUG00000005614	CACNG5 (ENSHHUG00000005601)	CYTH3 (ENSHHUG00000005130)	ENSHHUG00000005123	RAC1 (ENSHHUG00000004781)	ENSHHUG00000004743	ENSHHUG00000004741	ENSHHUG00000004739	ENSHHUG00000004734	snu13a (ENSHHUG00000004697)	uqcrc2a (ENSHHUG00000004614)	ENSHHUG00000004583
Salmoninae	ANCESTRAL SPECIES	396					ENSGT00940000154964.y.a.p.a	ENSGT00940000160792.a	ENSGT00940000155806.c.b.d	ENSGT00940000158320.v	ENSGT00940000159273.h	ENSGT00390000018321.a	ENSGT00940000157448.k	ENSGT00940000156378.a.a.d	ENSGT00390000014429.a.e	ENSGT00390000011228.b.a.e.a.e #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a.b #22	ENSGT00390000005214 #23	ENSGT00940000160100.d #24	ENSGT00590000083094.a.a.c.a.n	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a.e ##26	ENSGT00940000164201.c.a.s	ENSGT00940000155686	ENSGT00950000185997	ENSGT00940000157279.k #30	ENSGT00510000046608.B.r #31	ENSGT00940000166173	ENSGT00940000153629.a.a.b.d #32	ENSGT00940000156409.f #33	ENSGT01030000234549.a.a.a.a.a.b.b.a.b	ENSGT00940000155820.a.f.b #34
Salmoninae_a	ANCESTRAL SPECIES	29	ENSGT00940000158791.b	ENSGT00940000153217.o	ENSGT00940000156138.d.f	ENSGT00940000156792.g.a.a	ENSGT00940000154964.y.a.p.a	ENSGT00940000160792.a	ENSGT00940000155806.c.b.d	ENSGT00940000158320.v	ENSGT00940000159273.h	ENSGT00390000018321.a.a	ENSGT00940000157448.k	ENSGT00940000156378.a.a.d	ENSGT00390000014429.a.e	ENSGT00390000011228.b.a.e.a.e #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a.b #22	ENSGT00390000005214 #23	ENSGT00940000160100.d #24	ENSGT00590000083094.a.a.c.a.n	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a.e ##26	ENSGT00940000164201.c.a.s	ENSGT00940000155686	ENSGT00390000002873.fb.a #29	ENSGT00940000157279.k #30	ENSGT00510000046608.B.r #31	ENSGT00940000166173	ENSGT00940000153629.a.a.b.d #32	ENSGT00940000156409.f #33	ENSGT01030000234549.a.a.a.a.a.b.b.a.b	ENSGT00940000155820.a.f.b #34
Salmo	ANCESTRAL SPECIES	33	ENSGT00940000156496.a.a.f.b	ENSGT00940000158791.b	ENSGT00940000153217.o.c	ENSGT00940000153217.o.d	ENSGT00940000156138.d.f	ENSGT00940000156792.g.a.a	ENSGT00940000154964.y.a.p.a	ENSGT00940000155806.c.b.d	ENSGT00940000158320.v	ENSGT00390000018321.a.a	ENSGT00940000157448.k	ENSGT00940000156378.a.a.d	ENSGT00390000014429.a.e	ENSGT00390000011228.b.a.e.a.e #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a.b #22	ENSGT00390000005214 #23	ENSGT00940000160100.d #24	ENSGT00590000083094.a.a.c.a.n	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a.e ##26	ENSGT00940000164201.c.a.s	ENSGT00940000155686	ENSGT00390000002873.fb.a #29	ENSGT00940000157279.k #30	ENSGT00510000046608.B.r #31	ENSGT00940000166173	ENSGT00940000153629.a.a.b.d #32	ENSGT00940000156409.f #33	ENSGT01030000234549.a.a.a.a.a.b.b.a.b	ENSGT00940000155820.a.f.b #34
River trout	MODERN SPECIES	5	padi2 (ENSSTUG00000049942)	padi2 (ENSSTUG00000049866)	RAP1GAP (ENSSTUG00000049792)	ENSSTUG00000049784	SLC2A1 (ENSSTUG00000049771)	ENSSTUG00000049737	ENSSTUG00000049725	gnl3 (ENSSTUG00000049719)	spcs1 (ENSSTUG00000049718)	nek4 (ENSSTUG00000049707)	CAMK1 (ENSSTUG00000049674)	ccdc3b (ENSSTUG00000049664)	FAM107A (ENSSTUG00000049661) #18	ENSSTUG00000049660	fhit (ENSSTUG00000049656) #21	ptprga (ENSSTUG00000048747) #22	C3orf14 (ENSSTUG00000048691) #23	fezf2 (ENSSTUG00000048682) #24	ENSSTUG00000047683	nampt2 (ENSSTUG00000047600)	ENSSTUG00000047594 ##26	mxa (ENSSTUG00000046959)	ENSSTUG00000046924	ATXN7 (ENSSTUG00000046907) #30	psmd6 (ENSSTUG00000046866) #31	slc2a9l1 (ENSSTUG00000046802)	prickle2b (ENSSTUG00000046785) #32	ADAMTS9 (ENSSTUG00000045845) #33	RHO (ENSSTUG00000045775)	magi1b (ENSSTUG00000045570) #34	slc25a26 (ENSSTUG00000045459) #35
Atlantic salmon	MODERN SPECIES	3	padi2 (ENSSSAG00000064220)	padi2 (ENSSSAG00000083831)	ENSSSAG00000064378	ENSSSAG00000066339	phc2b (ENSSSAG00000066460)	ENSSSAG00000066483	gnl3 (ENSSSAG00000066493)	spcs1 (ENSSSAG00000087936)	nek4 (ENSSSAG00000066505)	ENSSSAG00000066520	ccdc3b (ENSSSAG00000066698)	ENSSSAG00000082160	fam107a (ENSSSAG00000066703) #18	FHIT (ENSSSAG00000066710) #21	fhit (ENSSSAG00000091443)	PTPRG (ENSSSAG00000066821) #22	ENSSSAG00000098297 #23	fezf2 (ENSSSAG00000071953) #24	ENSSSAG00000072132	nampt2 (ENSSSAG00000077480)	synpr (ENSSSAG00000085340) ##26	mx2 (ENSSSAG00000077530)	ENSSSAG00000098558	thoc7 (ENSSSAG00000077684) #29	atxn7 (ENSSSAG00000077698) #30	psmd6 (ENSSSAG00000077709) #31	slc2a9l1 (ENSSSAG00000077730)	prickle2b (ENSSSAG00000077734) #32	ADAMTS9 (ENSSSAG00000077769) #33	ENSSSAG00000077893	magi1b (ENSSSAG00000078077) #34
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00940000158791.b	ENSGT00940000153217.o	ENSGT00940000156138.d.f	ENSGT00940000156792.g.a.a	ENSGT00940000154964.y.a.p.a	ENSGT00940000160792.a	ENSGT00940000155806.c.b.d	ENSGT00940000158320.v	ENSGT00940000159273.h	ENSGT00390000018321.a.a	ENSGT00940000157448.k	ENSGT00940000156378.a.a.d	ENSGT00390000014429.a.e	ENSGT00390000011228.b.a.e.a.e #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a.b #22	ENSGT00390000005214 #23	ENSGT00940000160100.d #24	ENSGT00590000083094.a.a.c.a.n	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a.e ##26	ENSGT00940000164201.c.a.s	ENSGT00950000185997	ENSGT00940000157279.k #30	ENSGT00510000046608.B.r #31	ENSGT00940000166173	ENSGT00940000153629.a.a.b.d #32	ENSGT00940000156409.f #33	ENSGT00940000155820.a.f.b #34	ENSGT00550000074950.a #35	ENSGT00940000158502.f #36
Oncorhynchus_a	ANCESTRAL SPECIES	3	ENSGT00940000156496.a.a.f.b	ENSGT00940000158791.b	ENSGT00940000153217.o	ENSGT00940000156138.d.f	ENSGT00940000156792.g.a.a	ENSGT00940000154964.y.a.p.a	ENSGT00940000160792.a	ENSGT00940000155806.c.b.d	ENSGT00940000158320.v	ENSGT00390000018321.a.a	ENSGT00940000157448.k	ENSGT00940000156378.a.a.d	ENSGT00390000014429.a.e	ENSGT00390000011228.b.a.e.a.e #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a.b #22	ENSGT00390000005214 #23	ENSGT00940000160100.d #24	ENSGT00590000083094.a.a.c.a.n	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a.e ##26	ENSGT00940000164201.c.a.s	ENSGT00940000157279.k #30	ENSGT00510000046608.B.r #31	ENSGT00940000166173	ENSGT00940000153629.a.a.b.d #32	ENSGT00940000156409.f #33	ENSGT00940000155820.a.f.b #34	ENSGT00550000074950.a #35	ENSGT00940000158502.f #36	ENSGT00940000158653.l #37
Chinook salmon	MODERN SPECIES	11	MAGI3 (ENSOTSG00005040628)	LRIG2 (ENSOTSG00005040702)	padi2 (ENSOTSG00005040711)	RAP1GAP (ENSOTSG00005040721)	SLC2A1 (ENSOTSG00005042306)	phc2b (ENSOTSG00005042326)	ENSOTSG00005042327	ANKS1A (ENSOTSG00005042329)	gnl3 (ENSOTSG00005042331)	spcs1 (ENSOTSG00005042334)	nek4 (ENSOTSG00005000114)	CAMK1 (ENSOTSG00005000348)	ccdc3b (ENSOTSG00005004252)	FAM107A (ENSOTSG00005004254) #18	fhit (ENSOTSG00005004255) #21	ptprga (ENSOTSG00005004286) #22	C3orf14 (ENSOTSG00005007640) #23	fezf2 (ENSOTSG00005007641) #24	ENSOTSG00005007644	nampt2 (ENSOTSG00005010666)	SYNPR (ENSOTSG00005010667) ##26	prickle2b (ENSOTSG00005010669) #32	ADAMTS9 (ENSOTSG00005010671) #33	ENSOTSG00005010709	magi1b (ENSOTSG00005010710) #34	ENSOTSG00005010741	LRIG1 (ENSOTSG00005010745) #36	kbtbd8 (ENSOTSG00005011597) #37	ENSOTSG00005011598	suclg2 (ENSOTSG00005011599)	TAFA1 (ENSOTSG00005012208)
Coho salmon	MODERN SPECIES		MAGI3 (ENSOKIG00005035518)	LRIG2 (ENSOKIG00005035422)	padi2 (ENSOKIG00005034839)	RAP1GAP (ENSOKIG00005034722)	SLC2A1 (ENSOKIG00005034513)	ENSOKIG00005034434	ANKS1A (ENSOKIG00005034342)	gnl3 (ENSOKIG00005034326)	spcs1 (ENSOKIG00005034306)	nek4 (ENSOKIG00005034273)	CAMK1 (ENSOKIG00005033254)	ccdc3b (ENSOKIG00005033185)	FAM107A (ENSOKIG00005033175) #18	ENSOKIG00005033168	fhit (ENSOKIG00005033149) #21	PTPRG (ENSOKIG00005030964) #22	C3orf14 (ENSOKIG00005030812) #23	fezf2 (ENSOKIG00005030799) #24	ENSOKIG00005030784	ENSOKIG00005029666	nampt2 (ENSOKIG00005029530)	SYNPR (ENSOKIG00005029514) ##26	ENSOKIG00005029506	mxa (ENSOKIG00005029032)	ATXN7 (ENSOKIG00005028979) #30	psmd6 (ENSOKIG00005028894) #31	slc2a9l1 (ENSOKIG00005028854)	prickle2b (ENSOKIG00005028847) #32	ADAMTS9 (ENSOKIG00005028063) #33	magi1b (ENSOKIG00005027755) #34	ENSOKIG00005027707
Rainbow trout	MODERN SPECIES	8	ENSOMYG00000049264	ENSOMYG00000025249	ENSOMYG00000027459	phc2b (ENSOMYG00000028038)	ENSOMYG00000028096	ENSOMYG00000028144	gnl3 (ENSOMYG00000028195)	glt8d1 (ENSOMYG00000028239)	spcs1 (ENSOMYG00000028262)	nek4 (ENSOMYG00000028284)	ENSOMYG00000028576	ENSOMYG00000050315	ccdc3b (ENSOMYG00000028959)	FAM107A (ENSOMYG00000028973) #18	FHIT (ENSOMYG00000028999) #21	PTPRG (ENSOMYG00000030506) #22	ENSOMYG00000070386	C3orf14 (ENSOMYG00000035610) #23	fezf2 (ENSOMYG00000035616) #24	ENSOMYG00000035992	nampt2 (ENSOMYG00000038345)	SYNPR (ENSOMYG00000038398) ##26	mx (ENSOMYG00000038725)	ENSOMYG00000039416	ATXN7 (ENSOMYG00000039430) #30	psmd6 (ENSOMYG00000039477) #31	slc2a9l1 (ENSOMYG00000039507)	prickle2b (ENSOMYG00000039526) #32	ADAMTS9 (ENSOMYG00000039854) #33	ENSOMYG00000064509	ENSOMYG00000040100
Huchen	MODERN SPECIES	49		ENSHHUG00000023145	ENSHHUG00000023140	ENSHHUG00000023126	ENSHHUG00000023118	ANKS1A (ENSHHUG00000023095)	gnl3 (ENSHHUG00000023072)	glt8d1 (ENSHHUG00000023058)	spcs1 (ENSHHUG00000023038)	nek4 (ENSHHUG00000022966)	CAMK1 (ENSHHUG00000022897)	ccdc3b (ENSHHUG00000022887)	FAM107A (ENSHHUG00000022875) #18	ENSHHUG00000022871 ##19	fhit (ENSHHUG00000022866) #21	ptprga (ENSHHUG00000022739) #22	C3orf14 (ENSHHUG00000022733) #23	fezf2 (ENSHHUG00000022725) #24	ENSHHUG00000020830	nampt2 (ENSHHUG00000020796)	SYNPR (ENSHHUG00000020791) ##26	ENSHHUG00000020788	ENSHHUG00000020783
Northern pike	MODERN SPECIES	16	MAGI3 (ENSELUG00000009324)	LRIG2 (ENSELUG00000009209)	padi2 (ENSELUG00000009161)	RAP1GAP (ENSELUG00000009082)	SLC2A1 (ENSELUG00000008925)	phc2b (ENSELUG00000008866)	ANKS1A (ENSELUG00000008787)	gnl3 (ENSELUG00000008767)	glt8d1 (ENSELUG00000001509)	spcs1 (ENSELUG00000008645)	nek4 (ENSELUG00000008684)	CAMK1 (ENSELUG00000008588)	ccdc3b (ENSELUG00000008553)	FAM107A (ENSELUG00000008536) #18	fhit (ENSELUG00000008502) #21	ptprga (ENSELUG00000008455) #22	C3orf14 (ENSELUG00000008420) #23	fezf2 (ENSELUG00000008410) #24	ENSELUG00000008289	ENSELUG00000008119	nampt2 (ENSELUG00000008096)	SYNPR (ENSELUG00000008054) ##26	thoc7 (ENSELUG00000033135) #29	MX1 (ENSELUG00000007988)	MX1 (ENSELUG00000033975)	thoc7 (ENSELUG00000007905) #29	ATXN7 (ENSELUG00000007854) #30	psmd6 (ENSELUG00000007816) #31	slc2a9l1 (ENSELUG00000007779)	prickle2b (ENSELUG00000000278) #32	ADAMTS9 (ENSELUG00000007560) #33
Acanthomorphata	ANCESTRAL SPECIES	357															ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b
Euacanthomorphacea	ANCESTRAL SPECIES	1															ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT01100000263505.b.b.a.a.a.a.b.a.b.b
Percomorphaceae	ANCESTRAL SPECIES	1															ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000179808	ENSGT00940000171293	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26
Tiger tail seahorse	MODERN SPECIES	422															ENSHCOG00000013750	ptprga (ENSHCOG00000013738) #22	ENSHCOG00000013666	ENSHCOG00000013652
Percomorphaceae_B	ANCESTRAL SPECIES	3															ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000159692	ENSGT00940000158955	ENSGT00940000156616.i	ENSGT00940000158289.a.a.d	ENSGT00940000177304	ENSGT00390000014507.b	ENSGT00980000199467	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000179808	ENSGT00940000171293
Ovalentaria	ANCESTRAL SPECIES	2									ENSGT00940000159692	ENSGT00390000014507.b	ENSGT00940000177304	ENSGT00940000158289.a.a.d	ENSGT00940000156616.i	ENSGT00940000158955	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00980000199467	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00940000171293	ENSGT00940000179808	ENSGT00390000005294.b	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26
Ovalentaria_B	ANCESTRAL SPECIES	56															ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00940000171293	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT00940000181432	ENSGT01100000263491.a.b.a.a.b.a
Cichlidae	ANCESTRAL SPECIES	1	ENSGT00940000162989.e.p	ENSGT00940000162989.e.o	ENSGT00940000164703.a	ENSGT00940000157024.k.a	ENSGT01100000263491.a.b.a.a.b.a	ENSGT00920000149095	ENSGT01030000234637.a.a.a.b ##26	ENSGT00940000159736.b	ENSGT00440000038072.d	ENSGT00930000151052	ENSGT00940000156015	ENSGT00940000156872.d	ENSGT00940000165244.b	ENSGT00390000004581	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	51														ENSGT00940000158955	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000159692	ENSGT00390000004581	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT01100000263491.a.b.a.a.b.a	ENSGT00940000157024.k.a	ENSGT00940000164703.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	66	ENSGT00940000162989.e.o	ENSGT00940000164703.a	ENSGT00940000157024.k.a	ENSGT01100000263491.a.b.a.a.b.a	ENSGT00920000149095	ENSGT01030000234637.a.a.a.b ##26	ENSGT00940000159736.b	ENSGT00440000038072.d	ENSGT00930000151052	ENSGT00940000156015	ENSGT00940000156872.d	ENSGT00940000165244.b	ENSGT00390000004581	ENSGT00940000158955	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000156616.i	ENSGT00940000159692
Haplochromini	ANCESTRAL SPECIES	78	ENSGT00940000162989.e.o	ENSGT00940000164703.a	ENSGT00940000157024.k.a	ENSGT01100000263491.a.b.a.a.b.a	ENSGT00920000149095	ENSGT01030000234637.a.a.a.b ##26	ENSGT00940000159736.b	ENSGT00440000038072.d	ENSGT00930000151052	ENSGT00940000156015	ENSGT00940000156872.d	ENSGT00940000165244.b	ENSGT00390000004581	ENSGT00940000158955	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a
Burton s mouthbrooder	MODERN SPECIES	579																PTPRG (ENSHBUG00000006200) #22	ENSHBUG00000006181	fezf2 (ENSHBUG00000006176) #24	ENSHBUG00000006157
Haplochromini_A	ANCESTRAL SPECIES	83	ENSGT00940000164703.a	ENSGT00940000157024.k.a	ENSGT01100000263491.a.b.a.a.b.a	ENSGT00920000149095	ENSGT01030000234637.a.a.a.b ##26	ENSGT00940000159736.b	ENSGT00440000038072.d	ENSGT00930000151052	ENSGT00940000156015	ENSGT00940000156872.d	ENSGT00940000160731	ENSGT00940000165244.b	ENSGT00390000004581	ENSGT00940000158955	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a
P. nyererei	MODERN SPECIES	627																PTPRG (ENSPNYG00000023181) #22	fezf2 (ENSPNYG00000023205) #24	ENSPNYG00000023233
Haplochromini_B	ANCESTRAL SPECIES		ENSGT00940000157446	ENSGT00940000165995	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00740000115534.b	ENSGT00940000154491.d.b	ENSGT00940000161320.f.b	ENSGT00390000004215.a.b.a	ENSGT00940000159430	ENSGT00940000177909	ENSGT00390000012914	ENSGT01030000234623.a.a.a.a.a	ENSGT00940000155094.a	ENSGT00940000158197.c	ENSGT00940000166655	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000159692	ENSGT00940000156616.i
Zebra mbuna	MODERN SPECIES	222																PTPRG (ENSMZEG00005010003) #22
Eastern happy	MODERN SPECIES	17	ENSACLG00000000311	ENSACLG00000000290	sypl2a (ENSACLG00000000264) ##26	atxn7l2a (ENSACLG00000000256)	cyb561d1 (ENSACLG00000000238)	ENSACLG00000000215	USP48 (ENSACLG00000000118)	camk1ga (ENSACLG00000000072)	ENSACLG00000000044	LDLRAD2 (ENSACLG00000026951)	ENSACLG00000026946	ENSACLG00000026941	ENSACLG00000026936	ENSACLG00000026929	fhit (ENSACLG00000026924) #21	ENSACLG00000026899 #22	fezf2 (ENSACLG00000026890) #24	ENSACLG00000026884	ENSACLG00000026879	ENSACLG00000026784	PLEKHA6 (ENSACLG00000026740)	apobec2a (ENSACLG00000026736)	ENSACLG00000026734	ENSACLG00000026636	stk35l (ENSACLG00000026625)	ENSACLG00000026615	ENSACLG00000026602	tp53rk (ENSACLG00000026597)	ENSACLG00000026589	slc2a10 (ENSACLG00000026583)	ENSACLG00000026548
Lyretail cichlid	MODERN SPECIES	428	ENSNBRG00000021160	USP48 (ENSNBRG00000021194)	ENSNBRG00000021247	cyb561d1 (ENSNBRG00000021315)	atxn7l2a (ENSNBRG00000021339)	sypl2a (ENSNBRG00000021419) ##26	ENSNBRG00000021444	ENSNBRG00000021466	ENSNBRG00000021581	ENSNBRG00000021589	LDLRAD2 (ENSNBRG00000021606)	ELF3 (ENSNBRG00000021617)	ENSNBRG00000021628	ENSNBRG00000021639	ENSNBRG00000021661	PTPRG (ENSNBRG00000021673) #22	ENSNBRG00000021702	ENSNBRG00000021748	ENSNBRG00000021767	apobec2a (ENSNBRG00000021776)	PLEKHA6 (ENSNBRG00000021785)
Nile tilapia	MODERN SPECIES	17	ENSONIG00000031735	ENSONIG00000020619	ENSONIG00000040317	stk35l (ENSONIG00000003114)	ENSONIG00000038354	ENSONIG00000034385	ENSONIG00000003110	ENSONIG00000033126	ENSONIG00000003106	ENSONIG00000030292	fhit (ENSONIG00000003104) #21	ENSONIG00000029375	ENSONIG00000027860	ENSONIG00000031817	ENSONIG00000036759	ptprga (ENSONIG00000039633) #22	ENSONIG00000031640	ENSONIG00000043138	ENSONIG00000028492	fezf2 (ENSONIG00000003101) #24	ENSONIG00000003092	ENSONIG00000030556	ENSONIG00000037663	ENSONIG00000035168	apobec2a (ENSONIG00000032374)	ENSONIG00000028480	ENSONIG00000031553	ENSONIG00000030641	ENSONIG00000027505	ENSONIG00000006973	ENSONIG00000041985
Midas cichlid	MODERN SPECIES	712																PTPRG (ENSACIG00000013898) #22
Pomacentridae	ANCESTRAL SPECIES	144															ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00940000171293	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT00940000181432	ENSGT01100000263491.a.b.a.a.b.a
Pomacentridae_A	ANCESTRAL SPECIES	89													ENSGT00940000157601	ENSGT00940000158955	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000171293	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00940000156669.b	ENSGT00940000158385
Spiny chromis	MODERN SPECIES	1026											cdk5r2a (ENSAPOG00000016175)	fbxo3 (ENSAPOG00000016222)	ENSAPOG00000016239	ENSAPOG00000016263	SH3YL1 (ENSAPOG00000016311)	ENSAPOG00000016336 #22
Amphiprion	ANCESTRAL SPECIES	108												ENSGT00390000006988.bb.b	ENSGT00940000157601	ENSGT00940000158955	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000171293	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00940000156669.b	ENSGT00940000158385
Clown anemonefish	MODERN SPECIES	1744															ENSAOCG00000016013	ptprga (ENSAOCG00000015978) #22	ENSAOCG00000015879
Orange clownfish	MODERN SPECIES	20	cyb561d1 (ENSAPEG00000024304)	ENSAPEG00000024288	USP48 (ENSAPEG00000024253)	camk1ga (ENSAPEG00000024240)	ENSAPEG00000024200	ENSAPEG00000024194	LDLRAD2 (ENSAPEG00000024190)	romo1 (ENSAPEG00000024186)	ergic3 (ENSAPEG00000024173)	ENSAPEG00000024164	cyc1 (ENSAPEG00000024154)	oard1 (ENSAPEG00000024122)	raly (ENSAPEG00000024106)	ENSAPEG00000024098	fhit (ENSAPEG00000024091) #21	ptprga (ENSAPEG00000024061) #22	ENSAPEG00000024010 #23	fezf2 (ENSAPEG00000023996) #24	ENSAPEG00000023973	nampt2 (ENSAPEG00000023920)	sh2d5 (ENSAPEG00000023908)	ENSAPEG00000023877	ENSAPEG00000023866	zgc:158258 (ENSAPEG00000023858)	yod1 (ENSAPEG00000023854)	PFKFB2 (ENSAPEG00000023825)	phtf1 (ENSAPEG00000023813)	ora1 (ENSAPEG00000023807)	ENSAPEG00000023801	PLXNA2 (ENSAPEG00000023716)	ENSAPEG00000023698
Bicolor damselfish	DUPLICATION
Bicolor damselfish	MODERN SPECIES	673															ENSSPAG00000023539	ENSSPAG00000023535 #22	PIP5KL1 (ENSSPAG00000023534)	dpm2 (ENSSPAG00000023533)
Bicolor damselfish	MODERN SPECIES	1906																ptprga (ENSSPAG00000000767) #22
Atherinomorphae	ANCESTRAL SPECIES	56																ENSGT00940000155048.d.a #22	ENSGT00980000199467	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00940000171293	ENSGT00940000179808	ENSGT00390000005294.b	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26
Oryzias	ANCESTRAL SPECIES	1	ENSGT00490000043388.b.a	ENSGT00940000155326.b	ENSGT00390000011228.b.a.e.a #18	ENSGT00950000183077.a.b	ENSGT00390000003839.a	ENSGT00390000013266	ENSGT00940000154468.tb.a	ENSGT00940000156368.a	ENSGT00390000004199	ENSGT01030000234623.a.a.a.a.a	ENSGT00940000158854	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00940000165995	ENSGT00940000157446	ENSGT00390000018852	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00940000171293	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT01100000263505.b.b.a.a.a.a.b.a.b.b	ENSGT00940000157024.k.a
Oryzias_b	ANCESTRAL SPECIES	3	ENSGT00940000155326.b	ENSGT00390000011228.b.a.e.a #18	ENSGT00950000183077.a.b	ENSGT00390000003839.a	ENSGT00390000013266	ENSGT00940000154468.tb.a	ENSGT00940000156368.a	ENSGT00390000004199	ENSGT01030000234623.a.a.a.a.a	ENSGT00940000172289	ENSGT00940000158854	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00940000165995	ENSGT00940000157446	ENSGT00390000018852	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000171293	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT00940000164807.F
Indian medaka	MODERN SPECIES	8	PTPRT (ENSOMEG00000001773)	FAM107A (ENSOMEG00000001711) #18	mkrn2 (ENSOMEG00000001704)	MKRN2OS (ENSOMEG00000001696)	tsen2 (ENSOMEG00000001692)	rbm39a (ENSOMEG00000001685)	si:ch211-15p9.2 (ENSOMEG00000001677)	nuf2 (ENSOMEG00000001674)	SERINC3 (ENSOMEG00000001667)	ENSOMEG00000001657	ENSOMEG00000001653	ENSOMEG00000001639	si:dkey-19e4.5 (ENSOMEG00000001615)	ENSOMEG00000001605	MTMR14 (ENSOMEG00000001585)	ptprga (ENSOMEG00000001562) #22	fezf2 (ENSOMEG00000001553) #24	ENSOMEG00000001533	nampt2 (ENSOMEG00000001493)	LDLRAD2 (ENSOMEG00000001485)	G0S2 (ENSOMEG00000001479)	ENSOMEG00000001470	camk1ga (ENSOMEG00000001460)	USP48 (ENSOMEG00000001449)	ENSOMEG00000001431	cyb561d1 (ENSOMEG00000001424)	atxn7l2a (ENSOMEG00000001416)	sypl2a (ENSOMEG00000001407) ##26	zc3h11a (ENSOMEG00000001403)	ENSOMEG00000001397	nfasca (ENSOMEG00000001388)
Javanese ricefish	MODERN SPECIES	19	ENSOJAG00000021558	ENSOJAG00000021557	mkrn2 (ENSOJAG00000021537)	MKRN2OS (ENSOJAG00000021535)	tsen2 (ENSOJAG00000021525)	rbm39a (ENSOJAG00000021406)	si:ch211-15p9.2 (ENSOJAG00000021403)	nuf2 (ENSOJAG00000021383)	ENSOJAG00000021378	SERINC3 (ENSOJAG00000021032)	ENSOJAG00000021007	ENSOJAG00000020618	si:dkey-19e4.5 (ENSOJAG00000020554)	ENSOJAG00000020540	MTMR14 (ENSOJAG00000019586)	ptprga (ENSOJAG00000019432) #22	fezf2 (ENSOJAG00000019416) #24	ENSOJAG00000018501	nampt2 (ENSOJAG00000018259)	LDLRAD2 (ENSOJAG00000018247)	ENSOJAG00000018240	ENSOJAG00000018232	camk1ga (ENSOJAG00000018209)	USP48 (ENSOJAG00000017837)	ENSOJAG00000017797	ENSOJAG00000017791	cyb561d1 (ENSOJAG00000017783)	atxn7l2a (ENSOJAG00000017748)	sypl2a (ENSOJAG00000017729) ##26	zc3h11a (ENSOJAG00000017710)	nfasca (ENSOJAG00000016891)
Oryzias_a	ANCESTRAL SPECIES	5	ENSGT00490000043388.b.a	ENSGT00940000155326.b	ENSGT00390000011228.b.a.e.a #18	ENSGT00950000183077.a.b	ENSGT00390000003839.a	ENSGT00390000013266	ENSGT00940000154468.tb.a	ENSGT00940000156368.a	ENSGT00390000004199	ENSGT01030000234623.a.a.a.a.a	ENSGT00940000158854	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00940000165995	ENSGT00940000157446	ENSGT00390000018852	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00940000171293	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT01100000263505.b.b.a.a.a.a.b.a.b.b	ENSGT00940000157024.k.a
Japanese Medaka HdrR	MODERN SPECIES	19	zgc:171566 (ENSORLG00000009641)	PTPRT (ENSORLG00000009770)	ENSORLG00000023811 #18	mkrn2 (ENSORLG00000009824)	MKRN2OS (ENSORLG00000025591)	ENSORLG00000026661	rbm39a (ENSORLG00000009919)	si:ch211-15p9.2 (ENSORLG00000022741)	nuf2 (ENSORLG00000009929)	SERINC3 (ENSORLG00000009959)	ENSORLG00000009973	ENSORLG00000010071	si:dkey-19e4.5 (ENSORLG00000010093)	ENSORLG00000010116	MTMR14 (ENSORLG00000010139)	ptprga (ENSORLG00000010143) #22	ENSORLG00000023114	fezf2 (ENSORLG00000010156) #24	ENSORLG00000010190	ENSORLG00000027434	nampt2 (ENSORLG00000010224)	LDLRAD2 (ENSORLG00000028509)	ENSORLG00000029505	ENSORLG00000010256	ENSORLG00000010272	USP48 (ENSORLG00000010336)	ENSORLG00000010345	cyb561d1 (ENSORLG00000023433)	atxn7l2a (ENSORLG00000010367)	ENSORLG00000029541	sypl2a (ENSORLG00000010400) ##26
Chinese medaka	MODERN SPECIES	957	zgc:171566 (ENSOSIG00000017642)	PTPRT (ENSOSIG00000017976)	FAM107A (ENSOSIG00000022270) #18	ENSOSIG00000022271	mkrn2 (ENSOSIG00000022273)	MKRN2OS (ENSOSIG00000022275)	ENSOSIG00000022276	rbm39a (ENSOSIG00000022280)	si:ch211-15p9.2 (ENSOSIG00000022285)	nuf2 (ENSOSIG00000022287)	SERINC3 (ENSOSIG00000022334)	ENSOSIG00000022563	si:dkey-19e4.5 (ENSOSIG00000022644)	ENSOSIG00000022648	MTMR14 (ENSOSIG00000022711)	ptprga (ENSOSIG00000022739) #22	fezf2 (ENSOSIG00000022742) #24	ENSOSIG00000023057	nampt2 (ENSOSIG00000023651)	LDLRAD2 (ENSOSIG00000023668)	ENSOSIG00000023669	ENSOSIG00000023672	camk1ga (ENSOSIG00000023728)	USP48 (ENSOSIG00000023793)	cyb561d1 (ENSOSIG00000023795)	atxn7l2a (ENSOSIG00000023798)	sypl2a (ENSOSIG00000023800) ##26	ENSOSIG00000023802	nfasca (ENSOSIG00000023836)	cntn2 (ENSOSIG00000023900)	chia.1 (ENSOSIG00000023924)
Cyprinodontiformes	ANCESTRAL SPECIES	58																ENSGT00940000155048.d.a #22	ENSGT00980000199467	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00940000171293	ENSGT00940000179808	ENSGT00390000005294.b	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26
Aplocheiloidei	ANCESTRAL SPECIES	415																ENSGT00940000155048.d.a #22	ENSGT00980000199467	ENSGT00940000160100 #24
Mangrove rivulus	MODERN SPECIES	274														ENSKMAG00000007098	ENSKMAG00000007083	PTPRG (ENSKMAG00000007062) #22	ENSKMAG00000007041	fezf2 (ENSKMAG00000007015) #24
Percomorphaceae_C	ANCESTRAL SPECIES	1															ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000158955	ENSGT00940000156616.i	ENSGT00940000158289.a.a.d	ENSGT00940000177304	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00980000199467	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000179808	ENSGT00940000171293
Percomorphaceae_D	ANCESTRAL SPECIES	3										ENSGT00940000158955	ENSGT00940000156616.i	ENSGT00940000158289.a.a.d	ENSGT00940000177304	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT01100000263505.b.b.a.a.a.a.b.a.b.b
Carangaria	ANCESTRAL SPECIES	3	ENSGT00390000013253	ENSGT00940000154543.d	ENSGT00940000160913	ENSGT00940000161979.C.f	ENSGT00940000156977.e	ENSGT00940000164258	ENSGT00940000159659.d.b	ENSGT00390000018852	ENSGT00940000157446.n	ENSGT00940000165995	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00740000115534.b	ENSGT00940000154491.d.b	ENSGT00940000161320.f.b	ENSGT00390000004215.a.b.a	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT00940000181432
Pleuronectoidei	ANCESTRAL SPECIES	4	ENSGT00950000183053.C.a	ENSGT00390000013253	ENSGT00940000154543.d	ENSGT00940000160913	ENSGT00940000156977.e	ENSGT00940000164258	ENSGT00940000159659.d.b	ENSGT00390000018852	ENSGT00940000157446.n	ENSGT00940000165995	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00740000115534.b	ENSGT00940000154491.d.b	ENSGT00940000161320.f.b	ENSGT00390000004215.a.b.a	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00940000171293	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT01100000263491.a.b.a.a.b.a
Turbot	MODERN SPECIES	18	ENSSMAG00000025521	ENSSMAG00000000784	slc41a1 (ENSSMAG00000000806)	ENSSMAG00000000844	ENSSMAG00000001039	ENSSMAG00000034873	ENSSMAG00000000959	ENSSMAG00000000956	ENSSMAG00000000945	ENSSMAG00000000871	ENSSMAG00000016620	ENSSMAG00000023730	ENSSMAG00000036641	ENSSMAG00000016558	ENSSMAG00000023152	PTPRG (ENSSMAG00000003396) #22	ENSSMAG00000003373 #23	fezf2 (ENSSMAG00000003363) #24	ENSSMAG00000003276	nampt2 (ENSSMAG00000003195)	ENSSMAG00000003182	ENSSMAG00000003173	ENSSMAG00000003082	ENSSMAG00000003037	ENSSMAG00000002932	ENSSMAG00000002839	cyb561d1 (ENSSMAG00000002813)	atxn7l2a (ENSSMAG00000002745)	sypl2a (ENSSMAG00000002706) ##26	ENSSMAG00000031765	ENSSMAG00000028569
Carangaria_A	ANCESTRAL SPECIES	7	ENSGT00390000013253	ENSGT00940000154543.d	ENSGT00940000160913	ENSGT00940000161979.C.f	ENSGT00940000156977.e	ENSGT00940000164258	ENSGT00940000159659.d.b	ENSGT00390000018852	ENSGT00940000157446.n	ENSGT00940000165995	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00740000115534.b	ENSGT00940000154491.d.b	ENSGT00940000161320.f.b	ENSGT00390000004215.a.b.a	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT00940000181432
Seriola	ANCESTRAL SPECIES	10	ENSGT00390000013253	ENSGT00940000154543.d	ENSGT00940000160913	ENSGT00940000161979.C.f	ENSGT00940000156977.e	ENSGT00940000164258	ENSGT00940000159659.d.b	ENSGT00390000018852	ENSGT00940000157446.n	ENSGT00940000165995	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00740000115534.b	ENSGT00940000154491.d.b	ENSGT00940000161320.f.b	ENSGT00390000004215.a.b.a	ENSGT00940000155048.d.a #22	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT01100000263491.a.b.a.a.b.a	ENSGT00940000157024.k.a
Greater amberjack	MODERN SPECIES	37	aldh1l1 (ENSSDUG00000008872)	KLF15 (ENSSDUG00000008839)	ENSSDUG00000008814	CPNE9 (ENSSDUG00000008707)	MTMR14 (ENSSDUG00000008636)	SETD5 (ENSSDUG00000008559)	si:dkey-19e4.5 (ENSSDUG00000008513)	ENSSDUG00000008381	ENSSDUG00000008351	ENSSDUG00000008338	tcf15 (ENSSDUG00000008333)	ENSSDUG00000008321	ENSSDUG00000008288	ENSSDUG00000008266	ENSSDUG00000008259	ptprga (ENSSDUG00000008221) #22	fezf2 (ENSSDUG00000008202) #24	ENSSDUG00000008159	nampt2 (ENSSDUG00000008121)	LDLRAD2 (ENSSDUG00000008100)	G0S2 (ENSSDUG00000008070)	ENSSDUG00000008056	camk1ga (ENSSDUG00000008040)	USP48 (ENSSDUG00000007820)	ENSSDUG00000007764	cyb561d1 (ENSSDUG00000007735)	atxn7l2a (ENSSDUG00000007723)	sypl2a (ENSSDUG00000007713) ##26	zc3h11a (ENSSDUG00000007698)	ENSSDUG00000007692	nfasca (ENSSDUG00000007347)
Yellowtail amberjack	MODERN SPECIES	3081	KLF15 (ENSSLDG00000017176)	ENSSLDG00000017187	ENSSLDG00000017219	MTMR14 (ENSSLDG00000017331)	ENSSLDG00000017370	si:dkey-19e4.5 (ENSSLDG00000017403)	ENSSLDG00000017423	ENSSLDG00000017505	ENSSLDG00000017518	tcf15 (ENSSLDG00000017528)	ENSSLDG00000017540	ENSSLDG00000017586	ENSSLDG00000017596	ENSSLDG00000017608	ENSSLDG00000017619	ptprga (ENSSLDG00000017645) #22	fezf2 (ENSSLDG00000017712) #24	ENSSLDG00000017730	nampt2 (ENSSLDG00000017805)	LDLRAD2 (ENSSLDG00000017866)	G0S2 (ENSSLDG00000017901)	ENSSLDG00000017927	camk1ga (ENSSLDG00000017961)	USP48 (ENSSLDG00000018001)	ENSSLDG00000018101	cyb561d1 (ENSSLDG00000018118)	atxn7l2a (ENSSLDG00000018129)	sypl2a (ENSSLDG00000018140) ##26	ENSSLDG00000018153	ENSSLDG00000018170	nfasca (ENSSLDG00000018190)
Barramundi perch	MODERN SPECIES	492															ENSLCAG00010021752	ptprga (ENSLCAG00010021570) #22	C3orf14 (ENSLCAG00010021554) #23	fezf2 (ENSLCAG00010021552) #24	ENSLCAG00010021551
Anabantaria	ANCESTRAL SPECIES										ENSGT00940000158955	ENSGT00940000156616.i	ENSGT00940000158289.a.a.d	ENSGT00390000015805.a	ENSGT00940000177304	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00940000171293	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT01100000263491.a.b.a.a.b.a
Anabantoidei	ANCESTRAL SPECIES	1											ENSGT00940000158955	ENSGT00940000156616.i	ENSGT00940000177304	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT01100000263505.b.b.a.a.a.a.b.a.b.b
Climbing perch	MODERN SPECIES	18	atxn7l2a (ENSATEG00000001363)	cyb561d1 (ENSATEG00000001312)	ENSATEG00000001201	ENSATEG00000001056	ENSATEG00000026358	ENSATEG00000001022	ENSATEG00000026523	ENSATEG00000000996	ENSATEG00000000992	ENSATEG00000000956	optc (ENSATEG00000000932)	ENSATEG00000000859	ENSATEG00000000820	ENSATEG00000000794	FHIT (ENSATEG00000026901) #21	PTPRG (ENSATEG00000000632) #22	ENSATEG00000005646	C3orf14 (ENSATEG00000000624) #23	fezf2 (ENSATEG00000000603) #24	ENSATEG00000000478	ENSATEG00000000586	nampt2 (ENSATEG00000000375)	ENSATEG00000006925	ENSATEG00000006941	ENSATEG00000006955	ENSATEG00000007017	ENSATEG00000007022	ENSATEG00000007068	phactr3b (ENSATEG00000007093)	ENSATEG00000028683	acot8 (ENSATEG00000007222)
Zig-zag eel	DUPLICATION
Zig-zag eel	MODERN SPECIES	65																ENSMAMG00000019449 #22	ENSMAMG00000019494
Zig-zag eel	MODERN SPECIES	19	ENSMAMG00000023764	ENSMAMG00000027775	ENSMAMG00000026365	ENSMAMG00000023766	ENSMAMG00000028439	ENSMAMG00000027774	ENSMAMG00000000446	ENSMAMG00000025883	ENSMAMG00000000540	ENSMAMG00000000584	ENSMAMG00000026275	ENSMAMG00000000599	ENSMAMG00000000639	ENSMAMG00000000740 #24	ENSMAMG00000000295	ENSMAMG00000000809 #22	ENSMAMG00000023773	ENSMAMG00000023770	ENSMAMG00000023767	bap1 (ENSMAMG00000023765)	ENSMAMG00000023761	cyb561d2 (ENSMAMG00000026941)	ENSMAMG00000023753	rassf1 (ENSMAMG00000023751)	tusc2b (ENSMAMG00000023749)	HYAL2 (ENSMAMG00000023746)	abhd14a (ENSMAMG00000023744)	ENSMAMG00000023743	ENSMAMG00000023736	ENSMAMG00000023730	ENSMAMG00000023721
Eupercaria	ANCESTRAL SPECIES																ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000159692	ENSGT00390000014507.b	ENSGT00940000177304	ENSGT00940000158289.a.a.d	ENSGT00940000156616.i	ENSGT00940000158955	ENSGT00980000199467	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000179808	ENSGT00940000171293
Tetraodontidae	ANCESTRAL SPECIES																	ENSGT00940000155048.d.a #22
Fugu	MODERN SPECIES	10	CHD6 (ENSTRUG00000007574)	pck1 (ENSTRUG00000008209)	PTPRT (ENSTRUG00000008419)	ENSTRUG00000028853	ENSTRUG00000009051	ENSTRUG00000030955	apobec2a (ENSTRUG00000009123)	ENSTRUG00000024589	ENSTRUG00000026525	ENSTRUG00000029613	ENSTRUG00000027924	ENSTRUG00000028631	FHIT (ENSTRUG00000024097) #21	ENSTRUG00000026235	ENSTRUG00000032486	ptprga (ENSTRUG00000000403) #22	ENSTRUG00000027054	ENSTRUG00000029060	ENSTRUG00000019555	ENSTRUG00000033393	fezf2 (ENSTRUG00000000387) #24	ENSTRUG00000000340	LDLRAD2 (ENSTRUG00000020702)	G0S2 (ENSTRUG00000022317)	ENSTRUG00000028827	camk1ga (ENSTRUG00000020045)	USP48 (ENSTRUG00000000276)	ENSTRUG00000021493	ENSTRUG00000032468	ENSTRUG00000032294	ENSTRUG00000032000
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	ABHD6 (ENSTNIG00000017494) #10	aldh1l1 (ENSTNIG00000017493)	pigu (ENSTNIG00000017492)	mcm2 (ENSTNIG00000017491)	ENSTNIG00000017490	blcap (ENSTNIG00000017489)	ripor3 (ENSTNIG00000017488)	CHD6 (ENSTNIG00000017487)	pck1 (ENSTNIG00000017486)	ENSTNIG00000017485	appl1 (ENSTNIG00000006821)	ENSTNIG00000000796	ENSTNIG00000001632	ENSTNIG00000003021	ENSTNIG00000003567	ENSTNIG00000000231 #22	ENSTNIG00000014251 #22	ENSTNIG00000014252	fezf2 (ENSTNIG00000014253) #24	ENSTNIG00000014254	LDLRAD2 (ENSTNIG00000005894)	ENSTNIG00000005893	camk1ga (ENSTNIG00000005892)	ENSTNIG00000004313	ENSTNIG00000004314	cyb561d1 (ENSTNIG00000001240)	atxn7l2a (ENSTNIG00000004315)	sypl2a (ENSTNIG00000004316) ##26	ENSTNIG00000004317	ENSTNIG00000003119	stk35l (ENSTNIG00000003120)
Tetraodon	MODERN SPECIES	26	aldh1l1 (ENSTNIG00000017493)	pigu (ENSTNIG00000017492)	mcm2 (ENSTNIG00000017491)	ENSTNIG00000017490	blcap (ENSTNIG00000017489)	ripor3 (ENSTNIG00000017488)	CHD6 (ENSTNIG00000017487)	pck1 (ENSTNIG00000017486)	ENSTNIG00000017485	appl1 (ENSTNIG00000006821)	ENSTNIG00000000796	ENSTNIG00000001632	ENSTNIG00000003021	ENSTNIG00000003567	ENSTNIG00000000231 #22	ENSTNIG00000014251 #22	ENSTNIG00000014252	fezf2 (ENSTNIG00000014253) #24	ENSTNIG00000014254	LDLRAD2 (ENSTNIG00000005894)	ENSTNIG00000005893	camk1ga (ENSTNIG00000005892)	ENSTNIG00000004313	ENSTNIG00000004314	cyb561d1 (ENSTNIG00000001240)	atxn7l2a (ENSTNIG00000004315)	sypl2a (ENSTNIG00000004316) ##26	ENSTNIG00000004317	ENSTNIG00000003119	stk35l (ENSTNIG00000003120)	ENSTNIG00000004937
Eupecaria_A	ANCESTRAL SPECIES																ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000158955	ENSGT00940000156616.i	ENSGT00940000158289.a.a.d	ENSGT00940000177304	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00980000199467	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000179808	ENSGT00940000171293
Ballan wrasse	MODERN SPECIES	306																ptprga (ENSLBEG00000019448) #22	C3orf14 (ENSLBEG00000019602) #23	fezf2 (ENSLBEG00000019627) #24	ENSLBEG00000019680	nampt2 (ENSLBEG00000019765)	LDLRAD2 (ENSLBEG00000019810)	G0S2 (ENSLBEG00000019829)	G0S2 (ENSLBEG00000019843)	ENSLBEG00000019858	ENSLBEG00000019895	camk1ga (ENSLBEG00000019997)	USP48 (ENSLBEG00000020110)	ENSLBEG00000020177	cyb561d1 (ENSLBEG00000020196)	atxn7l2a (ENSLBEG00000020253)	sypl2a (ENSLBEG00000020453) ##26
Eupecaria_B	ANCESTRAL SPECIES	2									ENSGT00940000158955	ENSGT00940000156616.i	ENSGT00940000158289.a.a.d	ENSGT00940000177304	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000179808	ENSGT00940000171293	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26
Eupecaria_C	ANCESTRAL SPECIES																	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT01100000263491.a.b.a.a.b.a
Gilthead seabream	MODERN SPECIES	20	ENSSAUG00010010001	arfrp1 (ENSSAUG00010010119)	ENSSAUG00010010162	ENSSAUG00010013243	nampt2 (ENSSAUG00010013251)	LDLRAD2 (ENSSAUG00010014243)	ENSSAUG00010014244	ENSSAUG00010014245	camk1ga (ENSSAUG00010014249)	USP48 (ENSSAUG00010014397)	ENSSAUG00010014653	cyb561d1 (ENSSAUG00010014654)	ENSSAUG00010014656	atxn7l2a (ENSSAUG00010014657)	ENSSAUG00010014661	ptprga (ENSSAUG00010014694) #22	ENSSAUG00010018449	ENSSAUG00010018450 #23	fezf2 (ENSSAUG00010018451) #24	ENSSAUG00010018452	FHIT (ENSSAUG00010018453) #21
Eupercaria_incertae_sedis	ANCESTRAL SPECIES																	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT00940000157024.k.a
European seabass	MODERN SPECIES	10	ENSDLAG00005010557	ENSDLAG00005033646	ENSDLAG00005008610	optc (ENSDLAG00005029559)	ENSDLAG00005008599	ENSDLAG00005005103	ENSDLAG00005004833	ENSDLAG00005028191	ENSDLAG00005004818	ENSDLAG00005012224	ENSDLAG00005027079	ENSDLAG00005032971	FHIT (ENSDLAG00005008925) #21	ENSDLAG00005008938	ENSDLAG00005008947	PTPRG (ENSDLAG00005008999) #22	ENSDLAG00005010339	C3orf14 (ENSDLAG00005028095) #23	fezf2 (ENSDLAG00005010351) #24	ENSDLAG00005010575	nampt2 (ENSDLAG00005018126)	ENSDLAG00005018630	ENSDLAG00005028829	ENSDLAG00005018655	ENSDLAG00005018735	ENSDLAG00005018825	ENSDLAG00005019216	cyb561d1 (ENSDLAG00005032374)	atxn7l2a (ENSDLAG00005019246)	SYPL1 (ENSDLAG00005029498) ##26	ENSDLAG00005034777
Large yellow croaker	MODERN SPECIES	478	taf1b (ENSLCRG00005003586)	ADAM17 (ENSLCRG00005003594)	cpsf3 (ENSLCRG00005003797)	asap2b (ENSLCRG00005003839)	ENSLCRG00005005941	ENSLCRG00005005943	ENSLCRG00005005946	ENSLCRG00005005948	allc (ENSLCRG00005005949)	kidins220b (ENSLCRG00005005961)	mboat2b (ENSLCRG00005005984)	cep43 (ENSLCRG00005005994)	ccr6a (ENSLCRG00005005998)	KIF26A (ENSLCRG00005006001)	PLEKHA6 (ENSLCRG00005006009)	ptprga (ENSLCRG00005006648) #22	ENSLCRG00005006817	fezf2 (ENSLCRG00005006818) #24	ENSLCRG00005006819	ENSLCRG00005006821	zc3h11a (ENSLCRG00005006827)	sypl2a (ENSLCRG00005006835) ##26	atxn7l2a (ENSLCRG00005006837)	cyb561d1 (ENSLCRG00005006841)	USP48 (ENSLCRG00005006859)	camk1ga (ENSLCRG00005007012)	ENSLCRG00005007080	G0S2 (ENSLCRG00005007083)	LDLRAD2 (ENSLCRG00005007084)	nampt2 (ENSLCRG00005007086)	ENSLCRG00005007091
Perciformes	ANCESTRAL SPECIES										ENSGT00940000158955	ENSGT00940000156616.i	ENSGT00940000158289.a.a.d	ENSGT00940000177304	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000179808	ENSGT00940000171293	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26
Perciformes_a	ANCESTRAL SPECIES	27	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330	ENSGT00940000157312	ENSGT00940000156915.f.b	ENSGT00940000156308	ENSGT00940000156047.a	ENSGT00940000158955	ENSGT00940000156616.i	ENSGT00940000158289.a.a.d	ENSGT00940000177304	ENSGT00390000014507.b	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26	ENSGT00920000149095	ENSGT01100000263491.a.b.a.a.b.a
Pike perch	MODERN SPECIES	46	ENSSLUG00000012416	ENSSLUG00000012425	ENSSLUG00000012426	ENSSLUG00000012428	ENSSLUG00000012432	ENSSLUG00000012437	ENSSLUG00000012439	ENSSLUG00000012443	ENSSLUG00000012447	ENSSLUG00000012451	ENSSLUG00000012456	ENSSLUG00000012458	ENSSLUG00000012498	ENSSLUG00000012499	fhit (ENSSLUG00000012503) #21	ptprga (ENSSLUG00000012549) #22	C3orf14 (ENSSLUG00000012734) #23	fezf2 (ENSSLUG00000012737) #24	ENSSLUG00000012778	nampt2 (ENSSLUG00000013504)	LDLRAD2 (ENSSLUG00000013787)	G0S2 (ENSSLUG00000013791)	ENSSLUG00000013793	camk1ga (ENSSLUG00000013805)	USP48 (ENSSLUG00000013927)	ENSSLUG00000014096	cyb561d1 (ENSSLUG00000014102)	atxn7l2a (ENSSLUG00000014106)	sypl2a (ENSSLUG00000014113) ##26	ENSSLUG00000014122	ENSSLUG00000014129
Channel bull blenny	MODERN SPECIES	19	IQSEC1 (ENSCGOG00000003441)	ENSCGOG00000003431	ENSCGOG00000003430	hdac11 (ENSCGOG00000003367)	FBLN2 (ENSCGOG00000002986)	ELF3 (ENSCGOG00000002966)	ENSCGOG00000002965	apobec2a (ENSCGOG00000002935)	cacna1sa (ENSCGOG00000002855)	optc (ENSCGOG00000002839)	ENSCGOG00000002836	ENSCGOG00000002833	ENSCGOG00000011288	ENSCGOG00000011286	fhit (ENSCGOG00000011284) #21	ptprga (ENSCGOG00000010585) #22	C3orf14 (ENSCGOG00000010554) #23	fezf2 (ENSCGOG00000010546) #24	ENSCGOG00000006097	nampt2 (ENSCGOG00000005912)	LDLRAD2 (ENSCGOG00000005906)	G0S2 (ENSCGOG00000005902)	ENSCGOG00000005895	camk1ga (ENSCGOG00000005886)	USP48 (ENSCGOG00000004627)	ENSCGOG00000004502	cyb561d1 (ENSCGOG00000004499)	ENSCGOG00000004497	wnt7aa (ENSCGOG00000004486)	ptpdc1a (ENSCGOG00000004465)	barx1 (ENSCGOG00000004454)
Cottioidei	ANCESTRAL SPECIES												ENSGT00940000158955	ENSGT00940000156616.i	ENSGT00940000158289.a.a.d	ENSGT00940000177304	ENSGT00940000159692	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT00390000004581	ENSGT00390000005294.b	ENSGT00940000179808	ENSGT00940000171293	ENSGT00940000165244.b	ENSGT00940000156872.d	ENSGT00940000156015	ENSGT00930000151052	ENSGT00440000038072.d	ENSGT00940000159736.b	ENSGT01030000234637.a.a.a.b ##26
Stickleback	MODERN SPECIES	17	prok2 (ENSGACG00000011815)	RYBP (ENSGACG00000011809)	shq1 (ENSGACG00000011797)	gxylt2 (ENSGACG00000011788)	ppp4r2b (ENSGACG00000011779)	pdzrn3b (ENSGACG00000011770)	ENSGACG00000011748	ENSGACG00000011735	cntn4 (ENSGACG00000011729)	EPB41L1 (ENSGACG00000011718)	ENSGACG00000011676	ENSGACG00000011673	apobec2a (ENSGACG00000011671)	cacna1sa (ENSGACG00000011658)	PLEKHA6 (ENSGACG00000011651)	ptprga (ENSGACG00000011636) #22	fezf2 (ENSGACG00000011629) #24	ENSGACG00000011618	nampt2 (ENSGACG00000011613)	ENSGACG00000011610	ENSGACG00000011602	camk1ga (ENSGACG00000011590)	USP48 (ENSGACG00000011572)	ENSGACG00000011567	cyb561d1 (ENSGACG00000011562)	ENSGACG00000011560	ENSGACG00000011559	atxn7l2a (ENSGACG00000011554)	sypl2a (ENSGACG00000011542) ##26	zc3h11a (ENSGACG00000011531)	stk35l (ENSGACG00000011527)
Lumpfish	DUPLICATION
Lumpfish	MODERN SPECIES	20	RASSF5 (ENSCLMG00005009385)	ikbke (ENSCLMG00005009384)	srgap2 (ENSCLMG00005008280)	zgc:101564 (ENSCLMG00005008264)	foxp4 (ENSCLMG00005008262)	MDFI (ENSCLMG00005008261)	tfeb (ENSCLMG00005008260)	tmem183a (ENSCLMG00005008259)	ppfia4 (ENSCLMG00005008258)	ENSCLMG00005008257	myog (ENSCLMG00005008256)	mdm4 (ENSCLMG00005008255)	psma5 (ENSCLMG00005008252)	ENSCLMG00005008251	PTPRG (ENSCLMG00005008250) #22	PTPRG (ENSCLMG00005008248) #22	ENSCLMG00005008247 #23	fezf2 (ENSCLMG00005008245) #24	ENSCLMG00005008244	ENSCLMG00005008243	nampt2 (ENSCLMG00005007487)	LDLRAD2 (ENSCLMG00005007475)	G0S2 (ENSCLMG00005007474)	ENSCLMG00005007473	ENSCLMG00005007472	camk1ga (ENSCLMG00005007289)	USP48 (ENSCLMG00005007166)	ENSCLMG00005007160	cyb561d1 (ENSCLMG00005007156)	atxn7l2a (ENSCLMG00005007151)	sypl2a (ENSCLMG00005007117) ##26
Lumpfish	MODERN SPECIES	20	dyrk3 (ENSCLMG00005009386)	RASSF5 (ENSCLMG00005009385)	ikbke (ENSCLMG00005009384)	srgap2 (ENSCLMG00005008280)	zgc:101564 (ENSCLMG00005008264)	foxp4 (ENSCLMG00005008262)	MDFI (ENSCLMG00005008261)	tfeb (ENSCLMG00005008260)	tmem183a (ENSCLMG00005008259)	ppfia4 (ENSCLMG00005008258)	ENSCLMG00005008257	myog (ENSCLMG00005008256)	mdm4 (ENSCLMG00005008255)	psma5 (ENSCLMG00005008252)	ENSCLMG00005008251	PTPRG (ENSCLMG00005008250) #22	PTPRG (ENSCLMG00005008248) #22	ENSCLMG00005008247 #23	fezf2 (ENSCLMG00005008245) #24	ENSCLMG00005008244	ENSCLMG00005008243	nampt2 (ENSCLMG00005007487)	LDLRAD2 (ENSCLMG00005007475)	G0S2 (ENSCLMG00005007474)	ENSCLMG00005007473	ENSCLMG00005007472	camk1ga (ENSCLMG00005007289)	USP48 (ENSCLMG00005007166)	ENSCLMG00005007160	cyb561d1 (ENSCLMG00005007156)	atxn7l2a (ENSCLMG00005007151)
Pinecone sodierfish	MODERN SPECIES	19	pck1 (ENSMMDG00005009595)	ENSMMDG00005009598	ENSMMDG00005009600	ASB14 (ENSMMDG00005009605)	appl1 (ENSMMDG00005009618)	arhgef3 (ENSMMDG00005009656)	il17rd (ENSMMDG00005010289)	HESX1 (ENSMMDG00005010293)	ENSMMDG00005010301	ENSMMDG00005010303	IP6K1 (ENSMMDG00005010308)	ENSMMDG00005010322	ENSMMDG00005010368	ENSMMDG00005010374	fhit (ENSMMDG00005010375) #21	ptprga (ENSMMDG00005010376) #22	ENSMMDG00005010378	fezf2 (ENSMMDG00005010380) #24	ENSMMDG00005010411	nampt2 (ENSMMDG00005011386)	LDLRAD2 (ENSMMDG00005011489)	ENSMMDG00005011493	ENSMMDG00005011497	camk1ga (ENSMMDG00005011525)	USP48 (ENSMMDG00005013096)	ENSMMDG00005013403	ENSMMDG00005013405	ENSMMDG00005013412	cyb561d1 (ENSMMDG00005013415)	ENSMMDG00005004006	ENSMMDG00005004015
Cod	MODERN SPECIES	4	ENSGMOG00000028637	optc (ENSGMOG00000036218)	ENSGMOG00000022888	ENSGMOG00000012867	GOLT1A (ENSGMOG00000005070)	PLEKHA6 (ENSGMOG00000005014)	ENSGMOG00000026848	PIK3C2B (ENSGMOG00000034958)	FAM107A (ENSGMOG00000031613) #18	ENSGMOG00000029463	FHIT (ENSGMOG00000023026) #21	ENSGMOG00000029971	ENSGMOG00000037196	ENSGMOG00000033157	ENSGMOG00000025605	PTPRG (ENSGMOG00000004713) #22	ENSGMOG00000029484	ENSGMOG00000032804	fezf2 (ENSGMOG00000024752) #24	ENSGMOG00000008765	ENSGMOG00000035030	nampt2 (ENSGMOG00000009639)	ENSGMOG00000011962	ENSGMOG00000015231	ENSGMOG00000029873	ENSGMOG00000032987	ENSGMOG00000013167	ENSGMOG00000024047	ENSGMOG00000017684	ENSGMOG00000017698	ENSGMOG00000017747
Otomorpha	ANCESTRAL SPECIES	142	ENSGT00940000155218.A.c	ENSGT00940000165182.d	ENSGT00390000005939.a.b.b	ENSGT00940000156490.b.b	ENSGT00940000165342.b	ENSGT00550000074884	ENSGT00390000003017.c.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00390000011228.b.a.e.a #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a ##26	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000166173	ENSGT00940000153629.a.a.b #32	ENSGT00940000156409 #33	ENSGT01030000234549.a.a.a.a.a.b.b.a.c	ENSGT00940000155820.a #34	ENSGT00550000074950 #35	ENSGT00940000158502 #36
Clupeiformes	ANCESTRAL SPECIES	27	ENSGT00940000153717.a.b	ENSGT00940000158986	ENSGT00950000183202.a.a	ENSGT00940000155326.b	ENSGT00390000014941	ENSGT00390000006658.a.a	ENSGT00950000183156.a.b.b.b.b.b	ENSGT00940000155285.a	ENSGT00530000063113.B	ENSGT00390000005315	ENSGT00390000003017.c.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a ##26	ENSGT00390000002873 #29	ENSGT00940000157279 #30	ENSGT00510000046608.B #31	ENSGT00940000166173	ENSGT00940000153629.a.a.b #32	ENSGT00940000156409 #33	ENSGT00940000155820.a.a #34	ENSGT01030000234549.a.a.a.a.a.b.b.a.c	ENSGT00940000155820.a.b #34	ENSGT00550000074950 #35
Denticle herring	MODERN SPECIES	3	STAC3 (ENSDCDG00000034285)	NXPH4 (ENSDCDG00000034291)	shmt2 (ENSDCDG00000034339)	NDUFA4L2 (ENSDCDG00000034749)	fam210b (ENSDCDG00000034750)	PPP1R16B (ENSDCDG00000034751)	ARHGAP40 (ENSDCDG00000034753)	slc32a1 (ENSDCDG00000034755)	aurka (ENSDCDG00000034756)	prelid3b (ENSDCDG00000034757)	CAMK1 (ENSDCDG00000034765)	ccdc3b (ENSDCDG00000034922)	FAM107A (ENSDCDG00000034924) #18	ENSDCDG00000034926 ##19	FHIT (ENSDCDG00000034929) #21	ptprga (ENSDCDG00000035017) #22	ENSDCDG00000035319	C3orf14 (ENSDCDG00000035321) #23	fezf2 (ENSDCDG00000035324) #24	ENSDCDG00000016705	nampt2 (ENSDCDG00000016915)	SYNPR (ENSDCDG00000017325) ##26	thoc7 (ENSDCDG00000017329) #29	ATXN7 (ENSDCDG00000017336) #30	psmd6 (ENSDCDG00000017348) #31	slc2a9l1 (ENSDCDG00000017364)	prickle2b (ENSDCDG00000017367) #32	slc45a3 (ENSDCDG00000017379)	ENSDCDG00000017381	elk4 (ENSDCDG00000017387)	mfsd4aa (ENSDCDG00000017399)
Atlantic herring	MODERN SPECIES	21	R3HDM2 (ENSCHAG00000012793)	STAC3 (ENSCHAG00000012579)	shmt2 (ENSCHAG00000010569)	ENSCHAG00000010521	fam210b (ENSCHAG00000010506)	PPP1R16B (ENSCHAG00000010420)	ARHGAP40 (ENSCHAG00000010341)	slc32a1 (ENSCHAG00000010318)	aurka (ENSCHAG00000009943)	prelid3b (ENSCHAG00000009883)	CAMK1 (ENSCHAG00000009558)	ccdc3b (ENSCHAG00000009526)	FAM107A (ENSCHAG00000009493) #18	ENSCHAG00000009477 ##19	FHIT (ENSCHAG00000009456) #21	ptprga (ENSCHAG00000001641) #22	C3orf14 (ENSCHAG00000000696) #23	fezf2 (ENSCHAG00000026734) #24	ENSCHAG00000026464	nampt2 (ENSCHAG00000026435)	SYNPR (ENSCHAG00000026426) ##26	ENSCHAG00000026422	thoc7 (ENSCHAG00000026411) #29	ATXN7 (ENSCHAG00000026399) #30	psmd6 (ENSCHAG00000026389) #31	slc2a9l1 (ENSCHAG00000026386)	prickle2b (ENSCHAG00000026382) #32	ADAMTS9 (ENSCHAG00000025948) #33	rhol (ENSCHAG00000025884)	magi1b (ENSCHAG00000025769) #34	slc25a26 (ENSCHAG00000025725) #35
Otophysi	DUPLICATION
Otophysi	ANCESTRAL SPECIES	211	ENSGT00940000153920.b	ENSGT00940000153920.a.b.b	ENSGT00940000154554.a.e	ENSGT00940000154554.a.f	ENSGT00940000156315.e.b	ENSGT00390000009630	ENSGT00390000003017.c.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00390000011228.b.a.e.a #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a.k #22	ENSGT00550000074884	ENSGT00940000156490.b.b	ENSGT00390000005939.a.b.b	ENSGT00940000165182.d	ENSGT00940000155218.A.c	ENSGT00390000011620.a.a.b.e	ENSGT00940000158073.b	ENSGT00940000160902.c.a	ENSGT00390000018730.A.f	ENSGT00940000155532	ENSGT00940000154897.r	ENSGT00950000183021.a.b.d	ENSGT00940000161109	ENSGT00940000156478
Characiphysae	ANCESTRAL SPECIES	29	ENSGT00940000153920.b	ENSGT00940000153920.a.b.b	ENSGT00940000154554.a.e	ENSGT00940000154554.a.f.a	ENSGT00940000156315.e.b	ENSGT00390000009630	ENSGT00390000003017.c.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00390000011228.b.a.e.a #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a.k #22	ENSGT00550000074884	ENSGT00940000156490.b.b	ENSGT00390000005939.a.b.b	ENSGT00940000165182.d	ENSGT00390000011620.a.a.b.e	ENSGT00940000158073.b	ENSGT00940000160902.c.a	ENSGT00390000018730.A.f	ENSGT00940000155532	ENSGT00940000154897.r	ENSGT00950000183021.a.b.d	ENSGT00940000161109.s.a	ENSGT00950000182835.d.a.k.a	ENSGT00390000011648.b	ENSGT00940000157392.o.b
Characiphysae_b	ANCESTRAL SPECIES	26	ENSGT00940000153920.b	ENSGT00940000153920.a.b.b	ENSGT00940000154554.a.e	ENSGT00940000154554.a.f.a	ENSGT00940000156315.e.b	ENSGT00390000009630	ENSGT00390000003017.c.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00390000011228.b.a.e.a #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a.k #22	ENSGT00550000074884	ENSGT00940000156490.b.b	ENSGT00390000005939.a.b.b	ENSGT00940000165182.d	ENSGT00390000011620.a.a.b.e	ENSGT00940000158073.b	ENSGT00940000160902.c.a	ENSGT00390000018730.A.f	ENSGT00940000155532	ENSGT00940000154897.r	ENSGT00950000183021.a.b.d	ENSGT00940000161109.s.a	ENSGT00950000182835.d.a.k.a	ENSGT00390000011648.b	ENSGT00940000157392.o.b
Characoidei	ANCESTRAL SPECIES	15	ENSGT00940000153920.b	ENSGT00940000153920.a.b.b	ENSGT00940000154554.a.e	ENSGT00940000154554.a.f.a	ENSGT00940000156315.e.b	ENSGT00390000009630	ENSGT00390000003017.c.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00390000011228.b.a.e.a #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a.k #22	ENSGT00550000074884	ENSGT00940000156490.b.b	ENSGT00390000005939.a.b.b	ENSGT00940000165182.d	ENSGT00390000011620.a.a.b.e	ENSGT00940000158073.b	ENSGT00940000160902.c.a	ENSGT00390000018730.A.f	ENSGT00940000154897.r	ENSGT00950000183021.a.b.d	ENSGT00940000161109.s.a	ENSGT00950000182835.d.a.k.a	ENSGT00390000011648.b	ENSGT00940000157392.o.b	ENSGT00530000063868.a.b
Red-bellied piranha	MODERN SPECIES	6	itih3a.1 (ENSPNAG00000002739)	itih3a.1 (ENSPNAG00000013361)	ENSPNAG00000002680	gata2a (ENSPNAG00000013264)	rpn1 (ENSPNAG00000002645)	PBRM1 (ENSPNAG00000013202)	gnl3 (ENSPNAG00000013096)	glt8d1 (ENSPNAG00000002547)	spcs1 (ENSPNAG00000013052)	nek4 (ENSPNAG00000013047)	CAMK1 (ENSPNAG00000002527)	ccdc3b (ENSPNAG00000012983)	FAM107A (ENSPNAG00000012967) #18	fhit (ENSPNAG00000002483) #21	ENSPNAG00000005241	ptprga (ENSPNAG00000012931) #22	cse1l (ENSPNAG00000012903)	bmp7a (ENSPNAG00000002424)	ENSPNAG00000002414	ENSPNAG00000012810	TAF4 (ENSPNAG00000012794)	cdh4 (ENSPNAG00000012744)	ENSPNAG00000002348	ENSPNAG00000002345	ENSPNAG00000012633	ENSPNAG00000002324	ENSPNAG00000002320	ENSPNAG00000012597	ZMYND8 (ENSPNAG00000002300)	NCOA3 (ENSPNAG00000012470)	id1 (ENSPNAG00000002251)
Mexicana tetra	MODERN SPECIES	14	ENSAMXG00000016419	gata2a (ENSAMXG00000035079)	rpn1 (ENSAMXG00000017141)	PBRM1 (ENSAMXG00000017325)	gnl3 (ENSAMXG00000020880)	glt8d1 (ENSAMXG00000042559)	spcs1 (ENSAMXG00000017538)	nek4 (ENSAMXG00000031938)	CAMK1 (ENSAMXG00000017559)	zgc:194209 (ENSAMXG00000043132)	ENSAMXG00000042647	ccdc3b (ENSAMXG00000030925)	ENSAMXG00000042063	ENSAMXG00000037249	fhit (ENSAMXG00000016351) #21	ptprga (ENSAMXG00000016372) #22	cse1l (ENSAMXG00000016416)	bmp7a (ENSAMXG00000037549)	ENSAMXG00000041468	ENSAMXG00000043601	ENSAMXG00000016453	cdh4 (ENSAMXG00000016470)	ENSAMXG00000030049	ENSAMXG00000029646	dido1 (ENSAMXG00000006865)	ZMYND8 (ENSAMXG00000006882)	NCOA3 (ENSAMXG00000006902)	id1 (ENSAMXG00000030460)	PFKFB2 (ENSAMXG00000032440)	phtf1 (ENSAMXG00000006946)	cishb (ENSAMXG00000041177)
Electric eel	MODERN SPECIES	1405																ptprga (ENSEEEG00000004585) #22	cse1l (ENSEEEG00000004407)	ENSEEEG00000004385
Channel catfish	MODERN SPECIES	13	PRKCD (ENSIPUG00000023580)	SFMBT1 (ENSIPUG00000023595)	tmem110 (ENSIPUG00000023613)	mustn1b (ENSIPUG00000023617)	itih3 (ENSIPUG00000023620)	GATA2 (ENSIPUG00000023627)	rpn1 (ENSIPUG00000023633)	pbrm1 (ENSIPUG00000023639)	gnl3 (ENSIPUG00000023677)	glt8d1 (ENSIPUG00000023689)	spcs1 (ENSIPUG00000023691)	CAMK1 (ENSIPUG00000023697)	ccdc3b (ENSIPUG00000023706)	si:ch211-236d3.4 (ENSIPUG00000023707) #18	fhit (ENSIPUG00000023729) #21	ptprg (ENSIPUG00000023735) #22	cse1l (ENSIPUG00000023752)	Bmp7 (ENSIPUG00000023773)	ENSIPUG00000023776	taf4 (ENSIPUG00000023780)	cdh4 (ENSIPUG00000023783)	ENSIPUG00000023794	ENSIPUG00000023797	ENSIPUG00000023802	ENSIPUG00000023813	ENSIPUG00000023814	dido1 (ENSIPUG00000023816)	ENSIPUG00000023819	ZMYND8 (ENSIPUG00000023824)	NCOA3 (ENSIPUG00000023848)	id1 (ENSIPUG00000023852)
Cyprinoidei	ANCESTRAL SPECIES	79	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000154554.a.e	ENSGT00940000154554.a.f	ENSGT00940000156315.e.b	ENSGT00390000009630	ENSGT00390000003017.c.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00390000011228.b.a.e.a #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a.k #22	ENSGT00550000074884	ENSGT00390000000259.l	ENSGT00940000159007	ENSGT00530000063460.B	ENSGT00390000000427	ENSGT00940000160384	ENSGT00940000161439	ENSGT00390000015467	ENSGT00940000160899	ENSGT01040000240503.A.a.b	ENSGT00390000006565.b	ENSGT00390000018061	ENSGT00940000156757.i	ENSGT00390000000475	ENSGT00390000007336.a.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	245	ENSGT00390000004940.a.b.i	ENSGT01050000244971.B.a.a.b	ENSGT00390000000911.h.b.c	ENSGT00940000155851.c.b.a	ENSGT00940000154554.a.e	ENSGT00940000154554.a.f.c	ENSGT00940000156315.e.b.c	ENSGT00390000009630.o	ENSGT00390000003017.c.a.e	ENSGT00940000159273.f	ENSGT00390000018321.e	ENSGT00940000157448.e	ENSGT00940000156378.a.a.b	ENSGT00390000011228.b.a.e.a.a #18	ENSGT00990000210161	ENSGT00940000155048.d.a.k.a #22	ENSGT00550000074884.m	ENSGT00940000153116.A.a	ENSGT00940000159007.g	ENSGT00530000063460.B	ENSGT00390000000427	ENSGT00940000160384	ENSGT00940000161439	ENSGT00390000015467.a	ENSGT00940000163190.h.a.b.j.b.a	ENSGT00940000163190.g.b.a
Cyprininae_a	ANCESTRAL SPECIES	161	ENSGT00990000205730	ENSGT00390000000911.h.b.c	ENSGT00940000155851.c.b.a	ENSGT00940000154554.a.e.a	ENSGT00940000154554.a.f.c	ENSGT00940000156315.e.b.c	ENSGT00390000009630.o	ENSGT00390000003017.c.a.e.a	ENSGT00940000158320.r	ENSGT00940000159273.f	ENSGT00390000018321.e	ENSGT00940000157448.e	ENSGT00940000156378.a.a.b	ENSGT00390000011228.b.a.e.a.a #18	ENSGT00990000210161	ENSGT00940000155048.d.a.k.a #22	ENSGT00550000074884.m	ENSGT00940000153116.A.a	ENSGT00940000159007.g	ENSGT00390000000427	ENSGT00940000160384.h	ENSGT00940000161439	ENSGT00940000163190.h.a.b.j.b.a	ENSGT00940000163190.g.b.a	ENSGT00560000077335.l
Common carp reference	MODERN SPECIES	42	ENSCCRG00000046289	gata2a (ENSCCRG00000071341)	rpn1 (ENSCCRG00000021056)	PBRM1 (ENSCCRG00000022099)	gnl3 (ENSCCRG00000047349)	glt8d1 (ENSCCRG00000023725)	spcs1 (ENSCCRG00000033515)	nek4 (ENSCCRG00000047359)	ENSCCRG00000023734	ENSCCRG00000081707	ENSCCRG00000035172	ENSCCRG00000023806 #18	ENSCCRG00000055629	ENSCCRG00000054907	ENSCCRG00000056013	ptprga (ENSCCRG00000043667) #22	cse1l (ENSCCRG00000008809)	ENSCCRG00000009102	slc35e1 (ENSCCRG00000061121)	ENSCCRG00000040758	ENSCCRG00000040792	r3hdm4 (ENSCCRG00000014106)	ENSCCRG00000033724	ENSCCRG00000018429	ndufs7 (ENSCCRG00000055445)	gamt (ENSCCRG00000021527)	dazap1 (ENSCCRG00000068688)	rps15 (ENSCCRG00000073965)	ENSCCRG00000021934	dda1 (ENSCCRG00000080513)	ENSCCRG00000030764
Golden-line barbel	MODERN SPECIES	399																ptprga (ENSSGRG00000019582) #22	cse1l (ENSSGRG00000018112)	slc35e1 (ENSSGRG00000018100)	pex11g (ENSSGRG00000018096)	APBA3 (ENSSGRG00000018087)	ABCA7 (ENSSGRG00000017342)	lrp11 (ENSSGRG00000017335)	ENSSGRG00000017334	pcmt (ENSSGRG00000017225)	nup43 (ENSSGRG00000017218)	lats1 (ENSSGRG00000017215)	ENSSGRG00000017212	ENSSGRG00000017210	ENSSGRG00000017205	AKT1 (ENSSGRG00000015824)	mfsd4b (ENSSGRG00000015814)
Goldfish	MODERN SPECIES	29	camk2n1 (ENSCARG00000052791)	ENSCARG00000052810	cdab (ENSCARG00000052820)	DNAJC16 (ENSCARG00000052870)	itih3a.1 (ENSCARG00000053417)	ENSCARG00000053804	ENSCARG00000053814	gata2a (ENSCARG00000053825)	rpn1 (ENSCARG00000053864)	glt8d1 (ENSCARG00000054403)	spcs1 (ENSCARG00000054424)	nek4 (ENSCARG00000054450)	CAMK1 (ENSCARG00000054633)	ENSCARG00000057123 #18	ENSCARG00000057133	ptprga (ENSCARG00000057211) #22	ENSCARG00000057572	ENSCARG00000057580	cse1l (ENSCARG00000057597)	odad1 (ENSCARG00000057639)	slc35e1 (ENSCARG00000057653)	pex11g (ENSCARG00000057680)	r3hdm4 (ENSCARG00000057694)	tax1bp3 (ENSCARG00000057726)	nr2f6b (ENSCARG00000057739)	ENSCARG00000057755	babam1 (ENSCARG00000057783)	plvapb (ENSCARG00000057883)	ANO8 (ENSCARG00000057911)	dda1 (ENSCARG00000058099)	ABHD8 (ENSCARG00000058154)
Cyprininae	ANCESTRAL SPECIES	230	ENSGT01050000244971.A.d.a.a.f	ENSGT00390000000911.h.b.d	ENSGT00940000155851.c.b.b	ENSGT00940000154554.a.f.d	ENSGT00940000156315.e.b.d	ENSGT00390000009630.p	ENSGT00390000003017.c.a.f	ENSGT00940000158320	ENSGT00940000159273.e	ENSGT00390000018321.f	ENSGT00940000157448.f	ENSGT00940000156378.a.a.a	ENSGT00390000014429.a	ENSGT00390000011228.b.a.e.a.b #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a.k.b #22	ENSGT00550000074884.n	ENSGT00390000000259.l	ENSGT00940000159007.h
Goldfish	MODERN SPECIES	2461	ENSCARG00000065569	cdab (ENSCARG00000065572)	DNAJC16 (ENSCARG00000065607)	ENSCARG00000066025	gata2a (ENSCARG00000066174)	rpn1 (ENSCARG00000066186)	PBRM1 (ENSCARG00000066430)	gnl3 (ENSCARG00000066663)	glt8d1 (ENSCARG00000066673)	spcs1 (ENSCARG00000066693)	nek4 (ENSCARG00000066707)	CAMK1 (ENSCARG00000066725)	ccdc3b (ENSCARG00000066885)	FAM107A (ENSCARG00000066894) #18	fhit (ENSCARG00000066905) #21	ptprga (ENSCARG00000066979) #22	cse1l (ENSCARG00000067760)	ENSCARG00000067864	slc35e1 (ENSCARG00000067872)	ENSCARG00000067883	APBA3 (ENSCARG00000067896)	ENSCARG00000067941	r3hdm4 (ENSCARG00000068003)	ENSCARG00000068019	ENSCARG00000068023	her2 (ENSCARG00000068025)	aldh4a1 (ENSCARG00000068039)	MRTO4 (ENSCARG00000068133)	akr7a3 (ENSCARG00000068145)
Cyprininae_a	ANCESTRAL SPECIES	208	ENSGT00390000000911.h.b.d	ENSGT00940000155851.c.b.b	ENSGT00940000154554.a.e.b	ENSGT00940000154554.a.f.d	ENSGT00940000156315.e.b.d	ENSGT00390000009630.p	ENSGT00390000003017.c.a.f	ENSGT00940000158320.q	ENSGT00940000159273.e	ENSGT00390000018321.f	ENSGT00940000157448.f	ENSGT00940000156378.a.a.a	ENSGT00390000014429.a	ENSGT00390000011228.b.a.e.a.b #18	ENSGT00510000047967 #21	ENSGT00940000155048.d.a.k.b #22	ENSGT00550000074884.n	ENSGT00390000000259.l	ENSGT00940000153116.A.b	ENSGT00940000159007.h	ENSGT00530000063460.B	ENSGT00940000160384.g
Common carp reference	MODERN SPECIES	13	itih3a.1 (ENSCCRG00000022078)	gata2a (ENSCCRG00000059592)	rpn1 (ENSCCRG00000007952)	PBRM1 (ENSCCRG00000008802)	gnl3 (ENSCCRG00000023714)	spcs1 (ENSCCRG00000023728)	nek4 (ENSCCRG00000023731)	ENSCCRG00000047362	ccdc3b (ENSCCRG00000065655)	FAM107A (ENSCCRG00000023835) #18	ENSCCRG00000049727	ENSCCRG00000072660	ENSCCRG00000067642	ENSCCRG00000054004	FHIT (ENSCCRG00000061782) #21	ptprga (ENSCCRG00000061677) #22	cse1l (ENSCCRG00000043454)	ENSCCRG00000043401	slc35e1 (ENSCCRG00000064045)	ENSCCRG00000043418	ENSCCRG00000043371	ENSCCRG00000008762	ENSCCRG00000054492	ENSCCRG00000064285	ENSCCRG00000062158	ENSCCRG00000070210	r3hdm4 (ENSCCRG00000072411)	ENSCCRG00000063829	ENSCCRG00000018968	her2 (ENSCCRG00000018966)	aldh4a1 (ENSCCRG00000064631)
Golden-line barbel	MODERN SPECIES	159												ENSSGRG00000028002	ENSSGRG00000028004	ENSSGRG00000028235	ENSSGRG00000028236	ptprga (ENSSGRG00000028247) #22	cse1l (ENSSGRG00000028451)	ENSSGRG00000029313	odad1 (ENSSGRG00000029315)	slc35e1 (ENSSGRG00000029316)	ENSSGRG00000029318	APBA3 (ENSSGRG00000029328)	r3hdm4 (ENSSGRG00000029355)	ENSSGRG00000029356	ENSSGRG00000029357	ENSSGRG00000029358	ENSSGRG00000029359	ENSSGRG00000029360	ENSSGRG00000029363	her2 (ENSSGRG00000029435)	akr7a3 (ENSSGRG00000029437)
Zebrafish	MODERN SPECIES	2	ENSDARG00000055053	gata2a (ENSDARG00000059327)	rpn1 (ENSDARG00000059323)	PBRM1 (ENSDARG00000003877)	gnl3 (ENSDARG00000006219)	glt8d1 (ENSDARG00000040157)	spcs1 (ENSDARG00000059298)	nek4 (ENSDARG00000040152)	CAMK1 (ENSDARG00000029474)	ENSDARG00000116980	ccdc3b (ENSDARG00000030632)	FAM107A (ENSDARG00000086300) #18	ENSDARG00000100321	ENSDARG00000112678	ENSDARG00000104993	ptprga (ENSDARG00000045006) #22	cse1l (ENSDARG00000006963)	slc35e1 (ENSDARG00000011945)	pex11g (ENSDARG00000025559)	APBA3 (ENSDARG00000090675)	ABCA7 (ENSDARG00000074221)	r3hdm4 (ENSDARG00000063254)	ARID3A (ENSDARG00000070843)	ENSDARG00000089646	ndufs7 (ENSDARG00000074552)	gamt (ENSDARG00000070844)	dazap1 (ENSDARG00000070846)	rps15 (ENSDARG00000070849)	ABHD8 (ENSDARG00000076620)	dda1 (ENSDARG00000076074)	ANO8 (ENSDARG00000077229)
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000155048.d.a.l #22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000155048.d.a.l #22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000155048.d.a.l #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000155048.d.a.l #22
Golden-line barbel	MODERN SPECIES	3117																ENSSGRG00000001831 #22
Characiphysae	ANCESTRAL SPECIES																	ENSGT00940000155048.d.a.l #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00940000155048.d.a.l #22
Electric eel	MODERN SPECIES	1158																ENSEEEG00000014120 #22
Osteoglossiformes	ANCESTRAL SPECIES	54	ENSGT00940000158855	ENSGT01050000244882.a.a.b.a.b	ENSGT00390000011230	ENSGT00950000182824.a.b.a.g	ENSGT00530000063557.a	ENSGT00940000153709.A.e	ENSGT00940000154899.fb.a	ENSGT00390000003017.c.a.c	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000156378.b	ENSGT00390000014429.a	ENSGT00390000011228.b.a.e.a #18	ENSGT00950000183004.a.a.b ##19	ENSGT00510000047967 #21	ENSGT00940000155048.d.a #22	ENSGT00390000005214 #23	ENSGT00940000160100 #24	ENSGT00590000083094.a.a.c.a	ENSGT00940000153456.b.b	ENSGT01030000234637.b.d.a.a.a ##26	ENSGT00940000173126	ENSGT00390000002873 #29	ENSGT00940000157279.i #30	ENSGT00510000046608.B.s #31	ENSGT00940000166173	ENSGT00940000153629.a.a.b #32	ENSGT00940000156409 #33	ENSGT01030000234549.a.a.a.a.a.b.b.a	ENSGT00940000155820.a #34	ENSGT00550000074950 #35
Asian bonytongue	MODERN SPECIES	14	cav3 (ENSSFOG00015029136)	oxtra (ENSSFOG00015019284)	rad18 (ENSSFOG00015019264)	SRGAP3 (ENSSFOG00015019228)	thumpd3 (ENSSFOG00015019210)	PTGIS (ENSSFOG00015019198)	KCNB1 (ENSSFOG00015032748)	PBRM1 (ENSSFOG00015019102)	glt8d1 (ENSSFOG00015031666)	spcs1 (ENSSFOG00015029632)	CAMK1 (ENSSFOG00015019005)	ccdc3b (ENSSFOG00015031083)	FAM107A (ENSSFOG00015018963) #18	ENSSFOG00015018952 ##19	fhit (ENSSFOG00015018887) #21	ptprga (ENSSFOG00015018812) #22	ENSSFOG00015018799	fezf2 (ENSSFOG00015018740) #24	ENSSFOG00015018359	nampt2 (ENSSFOG00015018243)	SYNPR (ENSSFOG00015018227) ##26	thoc7 (ENSSFOG00015018204) #29	ATXN7 (ENSSFOG00015018162) #30	psmd6 (ENSSFOG00015018135) #31	slc2a9l1 (ENSSFOG00015018103)	prickle2b (ENSSFOG00015030418) #32	ADAMTS9 (ENSSFOG00015017953) #33	rho (ENSSFOG00015017939)	magi1b (ENSSFOG00015017375) #34	slc25a26 (ENSSFOG00015017281) #35	LRIG1 (ENSSFOG00015017174) #36
P. kingsleyae	MODERN SPECIES	49												FAM107A (ENSPKIG00000023826) #18	ENSPKIG00000023813 ##19	fhit (ENSPKIG00000023792) #21	ENSPKIG00000023782	ptprga (ENSPKIG00000023745) #22	C3orf14 (ENSPKIG00000023719) #23	fezf2 (ENSPKIG00000023711) #24	ENSPKIG00000023698	ENSPKIG00000023548	nampt2 (ENSPKIG00000023445)	SYNPR (ENSPKIG00000023412) ##26	ENSPKIG00000023394	thoc7 (ENSPKIG00000023365) #29	ATXN7 (ENSPKIG00000023335) #30	psmd6 (ENSPKIG00000023314) #31	prickle2b (ENSPKIG00000023283) #32	ADAMTS9 (ENSPKIG00000023235) #33	magi1b (ENSPKIG00000022734) #34	ENSPKIG00000022646 #35	LRIG1 (ENSPKIG00000022604) #36
Osteoglossocephalai	ANCESTRAL SPECIES	160	ENSGT00390000008325.b.a	ENSGT00940000165342	ENSGT00940000157304	ENSGT00550000074884	ENSGT00390000003017.c.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.b	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00390000011228.b.a.e.a #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b
Osteoglossiformes	ANCESTRAL SPECIES	28	ENSGT01030000234595.B.c.a.f	ENSGT00950000182998.C.b.b	ENSGT00950000182998.C.b.a	ENSGT00950000183006.B.f.b.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.h	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000157304	ENSGT00550000074884	ENSGT00390000003017.c.a.d	ENSGT00940000158320	ENSGT00940000157448	ENSGT00940000156378.a.b	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.a.b ##26	ENSGT00940000157279.j #30	ENSGT00510000046608.B.t #31	ENSGT00390000016228.b	ENSGT00940000153629.a.a.a #32	ENSGT00940000155820.b #34	ENSGT00940000164303.b.b	ENSGT00940000162607.a	ENSGT00940000155644.b	ENSGT00550000074831.l	ENSGT00390000008631.a.o.b	ENSGT00940000159731	ENSGT00940000156326.b	ENSGT00940000165920.a
Asian bonytongue	MODERN SPECIES	11	GRM2 (ENSSFOG00015018982)	ENSSFOG00015018964	cav3 (ENSSFOG00015018959)	OXTR (ENSSFOG00015018895)	SRGAP3 (ENSSFOG00015021570)	ptgis (ENSSFOG00015021545)	KCNB1 (ENSSFOG00015021532)	stau1 (ENSSFOG00015021497)	cse1l (ENSSFOG00015021428)	PBRM1 (ENSSFOG00015021273)	gnl3 (ENSSFOG00015021228)	nek4 (ENSSFOG00015021215)	CAMK1 (ENSSFOG00015021178)	ENSSFOG00015021144 #20	ENSSFOG00015031702	PTPRG (ENSSFOG00015021117) #22	ENSSFOG00015020968	SYNPR (ENSSFOG00015020917) ##26	ATXN7 (ENSSFOG00015020910) #30	ENSSFOG00015025196	prickle2a (ENSSFOG00015029054) #32	MAGI1 (ENSSFOG00015020854) #34	ENSSFOG00015028939	kbtbd8 (ENSSFOG00015026870) #37	slc16a7 (ENSSFOG00015020802)	TAFA1 (ENSSFOG00015020770)	tafa4b (ENSSFOG00015020753)	UBA3 (ENSSFOG00015020666)	arl6ip5b (ENSSFOG00015026174)	LMOD3 (ENSSFOG00015020628)	ENSSFOG00015028695
P. kingsleyae	MODERN SPECIES	90																PTPRG (ENSPKIG00000024953) #22	ENSPKIG00000024883	SYNPR (ENSPKIG00000024844) ##26	ATXN7 (ENSPKIG00000024831) #30	PSMD6 (ENSPKIG00000024819) #31	ENSPKIG00000024813	PRICKLE2 (ENSPKIG00000024795) #32	ENSPKIG00000024778	MAGI1 (ENSPKIG00000024736) #34	slc16a7 (ENSPKIG00000024707)	TAFA1 (ENSPKIG00000024695)	UBA3 (ENSPKIG00000024656)	arl6ip5b (ENSPKIG00000024630)	LMOD3 (ENSPKIG00000024622)	MITF (ENSPKIG00000024589)	ENSPKIG00000024569
Clupeocephala	ANCESTRAL SPECIES	18	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.gb	ENSGT00940000158328	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00940000178103	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.d	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT01100000263542.B.a	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Otomorpha	ANCESTRAL SPECIES	112	ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00940000178103	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00940000154343.fb	ENSGT00510000048007	ENSGT00940000162218	ENSGT00530000063435.b	ENSGT00940000165103.b	ENSGT00840000129953	ENSGT00940000164786.a	ENSGT00940000167414	ENSGT00940000155198.B	ENSGT00940000165371.a	ENSGT00940000155198.A	ENSGT00950000183062.a.a.a	ENSGT00940000162859.o	ENSGT00940000158065	ENSGT00390000007605
Clupeiformes	ANCESTRAL SPECIES	140														ENSGT00940000178103	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00940000154343.fb	ENSGT00940000174411	ENSGT00940000162218	ENSGT00530000063435.b	ENSGT00940000165909	ENSGT00950000183019.f.b.a	ENSGT00940000157032.c.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00940000165995	ENSGT00940000157446	ENSGT00990000203541.a.b.b	ENSGT00390000018852	ENSGT00940000159659.d.b	ENSGT00940000164258	ENSGT00940000153110.B.e.b
Atlantic herring	MODERN SPECIES	21	ripor3 (ENSCHAG00000020493)	CHD6 (ENSCHAG00000020596)	rbl1 (ENSCHAG00000024062)	PTPRT (ENSCHAG00000024252)	pigu (ENSCHAG00000026383)	osgn1 (ENSCHAG00000026388)	mtss1 (ENSCHAG00000000223)	mych (ENSCHAG00000000269)	ergic3 (ENSCHAG00000000305)	romo1 (ENSCHAG00000000530)	pbrm1l (ENSCHAG00000001452)	CAMK1 (ENSCHAG00000005650)	FAM107A (ENSCHAG00000006070) #18	ENSCHAG00000006085 ##19	cfap20dc (ENSCHAG00000006097) #20	PTPRG (ENSCHAG00000006183) #22	tardbpb (ENSCHAG00000008909)	cenps (ENSCHAG00000008947)	rbp7b (ENSCHAG00000009016)	H6PD (ENSCHAG00000009024)	LMBR1L (ENSCHAG00000009084)	rhebl1 (ENSCHAG00000010034)	prkag1 (ENSCHAG00000010096)	ACVR1B (ENSCHAG00000010652)	ENSCHAG00000011526	si:dkey-19e4.5 (ENSCHAG00000014997)	SETD5 (ENSCHAG00000015104)	LHFPL4 (ENSCHAG00000015155)	MTMR14 (ENSCHAG00000015196)	CPNE9 (ENSCHAG00000016363)	ENSCHAG00000016566
Denticle herring	MODERN SPECIES	3	ENSDCDG00000027152	rbl1 (ENSDCDG00000027171)	PTPRT (ENSDCDG00000027280)	pigu (ENSDCDG00000029812)	osgn1 (ENSDCDG00000029815)	mtss1 (ENSDCDG00000029835)	mych (ENSDCDG00000030164)	ergic3 (ENSDCDG00000030167)	romo1 (ENSDCDG00000030188)	pbrm1l (ENSDCDG00000030227)	CAMK1 (ENSDCDG00000030451)	FAM107A (ENSDCDG00000030655) #18	ENSDCDG00000030659 ##19	ENSDCDG00000030665	cfap20dc (ENSDCDG00000030667) #20	PTPRG (ENSDCDG00000030697) #22	tardbpb (ENSDCDG00000031829)	cenps (ENSDCDG00000031841)	rbp7b (ENSDCDG00000031844)	H6PD (ENSDCDG00000031848)	ENSDCDG00000031850	LMBR1L (ENSDCDG00000031869)	rhebl1 (ENSDCDG00000032028)	prkag1 (ENSDCDG00000032093)	ACVR1B (ENSDCDG00000033435)	ENSDCDG00000033657	si:dkey-19e4.5 (ENSDCDG00000034391)	SETD5 (ENSDCDG00000034397)	LHFPL4 (ENSDCDG00000034399)	MTMR14 (ENSDCDG00000034416)	CPNE9 (ENSDCDG00000034443)
Otophysi	ANCESTRAL SPECIES	68	ENSGT00940000160123.e.b.a.a.a	ENSGT00390000013981	ENSGT00940000157748	ENSGT00940000160763	ENSGT01050000244882.a.a.b.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00940000154343.fb	ENSGT00510000048007	ENSGT00940000162218	ENSGT00530000063435.b	ENSGT00940000165103.b	ENSGT00840000129953	ENSGT00940000164786.a	ENSGT00940000167414	ENSGT00940000155198.B	ENSGT00940000165371.a	ENSGT00940000155198.A	ENSGT00950000183062.a.a.a	ENSGT00940000162859.o	ENSGT00940000158065	ENSGT00390000007605
Characiphysae	ANCESTRAL SPECIES	2	ENSGT00940000160123.e.b.a.a.b.d	ENSGT00940000160123.e.b.a.a.a	ENSGT00390000013981	ENSGT00940000157748	ENSGT00940000160763	ENSGT01050000244882.a.a.b.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000157304	ENSGT00390000003017.c.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00940000154343.fb	ENSGT00510000048007	ENSGT00940000162218	ENSGT00530000063435.b	ENSGT00940000165103.b	ENSGT00840000129953	ENSGT00940000161040.a	ENSGT00390000002762.a.a.b.a	ENSGT00950000182883.b.a.b.a	ENSGT00950000183092.a.c	ENSGT00940000155609.k	ENSGT00940000160065	ENSGT00940000160235	ENSGT00940000168625	ENSGT00950000182860.a.b.a
Characiphysae_b	ANCESTRAL SPECIES		ENSGT00940000160123.e.b.a.a.b.d	ENSGT00940000160123.e.b.a.a.a	ENSGT00390000013981	ENSGT00940000157748	ENSGT00940000160763	ENSGT01050000244882.a.a.b.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000157304	ENSGT00390000003017.c.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00940000154343.fb	ENSGT00510000048007	ENSGT00940000162218	ENSGT00530000063435.b	ENSGT00940000165103.b	ENSGT00840000129953	ENSGT00940000161040.a	ENSGT00390000002762.a.a.b.a	ENSGT00950000182883.b.a.b.a	ENSGT00950000183092.a.c	ENSGT00940000155609.k	ENSGT00940000160065	ENSGT00940000160235	ENSGT00940000168625	ENSGT00950000182860.a.b.a
Characoidei	ANCESTRAL SPECIES		ENSGT00940000160123.e.b.a.a.b.d	ENSGT00940000160123.e.b.a.a.a	ENSGT00390000013981	ENSGT00940000157748	ENSGT00940000160763	ENSGT01050000244882.a.a.b.a.a	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000157304	ENSGT00390000003017.c.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00940000154343.fb	ENSGT00510000048007	ENSGT00940000162218	ENSGT00530000063435.b	ENSGT00940000165103.b	ENSGT00840000129953	ENSGT00940000161040.a	ENSGT00390000002762.a.a.b.a	ENSGT00950000182883.b.a.b.a	ENSGT00950000183092.a.c	ENSGT00940000155609.k	ENSGT00940000160065	ENSGT00940000160235	ENSGT00940000168625	ENSGT00950000182860.a.b.a
Red-bellied piranha	MODERN SPECIES	53	ENSPNAG00000010766	ENSPNAG00000011086	zgc:66479 (ENSPNAG00000001543)	tarbp2 (ENSPNAG00000011128)	ENSPNAG00000011137	OXTR (ENSPNAG00000007175)	ptgis (ENSPNAG00000011160)	KCNB1 (ENSPNAG00000011167)	ENSPNAG00000001591	stau1 (ENSPNAG00000011323)	pbrm1l (ENSPNAG00000011378)	CAMK1 (ENSPNAG00000001882)	FAM107A (ENSPNAG00000011740) #18	ENSPNAG00000011791 ##19	cfap20dc (ENSPNAG00000011806) #20	PTPRG (ENSPNAG00000002014) #22	tardbpb (ENSPNAG00000002028)	cenps (ENSPNAG00000002065)	rbp7b (ENSPNAG00000012031)	H6PD (ENSPNAG00000006295)	epha2a (ENSPNAG00000002078)	rbm19 (ENSPNAG00000012069)
Mexicana tetra	MODERN SPECIES	4	ENSAMXG00000016632	zgc:66479 (ENSAMXG00000016650)	rsph3 (ENSAMXG00000029064)	tarbp2 (ENSAMXG00000016665)	ENSAMXG00000016692	OXTR (ENSAMXG00000039096)	ptgis (ENSAMXG00000016742)	KCNB1 (ENSAMXG00000016765)	ENSAMXG00000016793	stau1 (ENSAMXG00000016812)	pbrm1l (ENSAMXG00000016832)	CAMK1 (ENSAMXG00000038879)	FAM107A (ENSAMXG00000027682) #18	ENSAMXG00000039967 ##19	cfap20dc (ENSAMXG00000016907) #20	PTPRG (ENSAMXG00000016917) #22	tardbpb (ENSAMXG00000039549)	ENSAMXG00000043029	H6PD (ENSAMXG00000016984)	epha2a (ENSAMXG00000017007)	rbm19 (ENSAMXG00000017073)	NDUFA4L2 (ENSAMXG00000031579)	shmt2 (ENSAMXG00000036404)	NXPH4 (ENSAMXG00000017162)	stac3 (ENSAMXG00000032605)	R3HDM2 (ENSAMXG00000017180)	INHBC (ENSAMXG00000043015)	gli1 (ENSAMXG00000041979)	ENSAMXG00000038043	ARHGAP9 (ENSAMXG00000038772)	mars1 (ENSAMXG00000017335)
Electric eel	MODERN SPECIES	161				zgc:66479 (ENSEEEG00000021063)	tarbp2 (ENSEEEG00000021065)	ENSEEEG00000021066	oxtrb (ENSEEEG00000021067)	ptgis (ENSEEEG00000021068)	ENSEEEG00000021073	stau1 (ENSEEEG00000021091)	pbrm1l (ENSEEEG00000021110)	CAMK1 (ENSEEEG00000021119)	ENSEEEG00000021123	ENSEEEG00000021124 ##19	ENSEEEG00000021157	PTPRG (ENSEEEG00000021158) #22	tardbpb (ENSEEEG00000021159)	cenps (ENSEEEG00000021182)	ENSEEEG00000021184	rbp7b (ENSEEEG00000021185)	H6PD (ENSEEEG00000021187)	epha2a (ENSEEEG00000021190)	rbm19 (ENSEEEG00000021194)	ENSEEEG00000021201	shmt2 (ENSEEEG00000021230)	NXPH4 (ENSEEEG00000021554)	R3HDM2 (ENSEEEG00000021560)	INHBC (ENSEEEG00000021577)	gli1 (ENSEEEG00000021580)	ARHGAP9 (ENSEEEG00000021582)	mars1 (ENSEEEG00000021584)
Channel catfish	MODERN SPECIES	2	ENSIPUG00000023670	ENSIPUG00000023673	ENSIPUG00000023675	ENSIPUG00000023684	zgc:66479 (ENSIPUG00000023699)	tarbp2 (ENSIPUG00000023701)	tespa1 (ENSIPUG00000023710)	OXTR (ENSIPUG00000023713)	ptgis (ENSIPUG00000023715)	KCNB1 (ENSIPUG00000023722)	stau1 (ENSIPUG00000023725)	PBRM1 (ENSIPUG00000023736)	CAMK1 (ENSIPUG00000023756)	fam3d (ENSIPUG00000023765) ##19	c11h3orf67 (ENSIPUG00000023770) #20	PTPRG (ENSIPUG00000023782) #22	TARDBP (ENSIPUG00000023818)	cenps (ENSIPUG00000023822)	h6pd (ENSIPUG00000023834)	EPHA2 (ENSIPUG00000023840)	rbm19 (ENSIPUG00000023849)	SHMT2 (ENSIPUG00000023855)	nxph4 (ENSIPUG00000023858)	STAC3 (ENSIPUG00000023860)	r3hdm2 (ENSIPUG00000023873)	INHBC (ENSIPUG00000023895)	gli1 (ENSIPUG00000023898)	ENSIPUG00000024408	arhgap9 (ENSIPUG00000024409)	mars1 (ENSIPUG00000024410)	mars1 (ENSIPUG00000024413)
Cyprinoidei	ANCESTRAL SPECIES	2	ENSGT00940000160123.e.b.a.a.a	ENSGT00390000013981	ENSGT00940000157748	ENSGT00940000160763	ENSGT01050000244882.a.a.b.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b	ENSGT00940000156378.a.b.f	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00940000154343.fb	ENSGT00940000174411	ENSGT00940000162218	ENSGT00530000063435.b	ENSGT00940000165103.b	ENSGT00840000129953	ENSGT00940000164786.a	ENSGT00940000167414	ENSGT00940000155198.B	ENSGT00940000165371.a	ENSGT00940000155198.A	ENSGT00950000183062.a.a.a	ENSGT00940000162859.o	ENSGT00940000158065	ENSGT00390000007605
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	140										ENSGT00940000165342.a	ENSGT00390000003017.c.b.d	ENSGT00940000156378.a.b.f.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b.f ##19	ENSGT00390000005497.`b.b #20	ENSGT00940000155048.d.b.a #22	ENSGT00940000154343.fb.a	ENSGT00940000174411	ENSGT00940000162218	ENSGT00530000063435.b.d	ENSGT00940000165103.b.h	ENSGT00840000129953.f	ENSGT00940000164786.a.b	ENSGT00940000167414.a	ENSGT00940000165371.a.a	ENSGT00940000155198.A.c	ENSGT00950000183062.a.a.a.k.a	ENSGT00940000162859.o.a	ENSGT00940000158065.b	ENSGT00390000007605.d	ENSGT00390000013995.b.a.o.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	46	gbx2 (ENSCARG00000001380)	AGAP1 (ENSCARG00000001050)	faimb (ENSCARG00000000956)	ENSCARG00000000952	ENSCARG00000000936	psmb3 (ENSCARG00000000927)	UNC80 (ENSCARG00000000636)	ENSCARG00000000426	ENSCARG00000000243	SLC19A1 (ENSCARG00000000192)	ENSCARG00000056578	ENSCARG00000056510	ENSCARG00000056492	ENSCARG00000055892	ENSCARG00000055837	PTPRG (ENSCARG00000055791) #22	tardbpb (ENSCARG00000055360)	cenps (ENSCARG00000055300)	rbp7b (ENSCARG00000055270)	H6PD (ENSCARG00000054970)	epha2a (ENSCARG00000054314)	cntn4 (ENSCARG00000047197)	ENSCARG00000039954	ENSCARG00000038949	ENSCARG00000033727	pdzrn3b (ENSCARG00000033469)	gxylt2 (ENSCARG00000033387)	rybpb (ENSCARG00000033322)	prok2 (ENSCARG00000033291)	gpr27 (ENSCARG00000033279)	foxp1b (ENSCARG00000030943)
Goldfish	MODERN SPECIES	1260																PTPRG (ENSCARG00000031162) #22
Cyprininae_a	ANCESTRAL SPECIES	20	ENSGT00940000160123.e.b.a.a.a	ENSGT00390000013981.c	ENSGT00940000157748.y.a	ENSGT00940000160763.f	ENSGT01050000244882.a.a.b.b.b	ENSGT00940000153709.A.f.b	ENSGT00940000154899.fb.b.e	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00390000003017.c.b.d	ENSGT00940000156378.a.b.f.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00390000005497.`b.a #20	ENSGT00950000183004.a.a.b.f ##19	ENSGT00390000005497.`b.b #20	ENSGT00940000155048.d.b.a #22	ENSGT00940000154343.fb.a	ENSGT00940000174411	ENSGT00940000162218	ENSGT00530000063435.b.d	ENSGT00940000165103.b.h	ENSGT00840000129953.f	ENSGT00940000164786.a.b	ENSGT00940000167414.a	ENSGT00940000165371.a.a	ENSGT00940000155198.A.c	ENSGT00950000183062.a.a.a.k.a	ENSGT00940000162859.o.a	ENSGT00940000158065.b	ENSGT00390000007605.d	ENSGT00390000013995.b.a.o.b
Common carp reference	MODERN SPECIES	10	ENSCCRG00000032304	ENSCCRG00000074886	ENSCCRG00000041964	zgc:66479 (ENSCCRG00000041969)	ENSCCRG00000041972	ENSCCRG00000041979	oxtrb (ENSCCRG00000046824)	ptgis (ENSCCRG00000052040)	ENSCCRG00000063232	ENSCCRG00000054613	ENSCCRG00000052029	pbrm1l (ENSCCRG00000051197)	ENSCCRG00000079479	ENSCCRG00000051140 ##19	ENSCCRG00000060611 #20	ENSCCRG00000051131 #22	tardbpb (ENSCCRG00000013752)	rbp7b (ENSCCRG00000061221)	ENSCCRG00000072777	epha2a (ENSCCRG00000068142)	rbm19 (ENSCCRG00000008461)	cntn4 (ENSCCRG00000066369)	ENSCCRG00000018336	ENSCCRG00000018444	ENSCCRG00000047782	pdzrn3b (ENSCCRG00000002306)	ppp4r2b (ENSCCRG00000002302)	gxylt2 (ENSCCRG00000066461)	shq1 (ENSCCRG00000060346)	rybpb (ENSCCRG00000071274)	prok2 (ENSCCRG00000065684)
Golden-line barbel	MODERN SPECIES	550								oxtrb (ENSSGRG00000021982)	ptgis (ENSSGRG00000021983)	KCNB1 (ENSSGRG00000021988)	ENSSGRG00000021989	pbrm1l (ENSSGRG00000022093)	CAMK1 (ENSSGRG00000025089)	ENSSGRG00000025090 #18	ENSSGRG00000025091 ##19	PTPRG (ENSSGRG00000025098) #22	tardbpb (ENSSGRG00000025301)	cenps (ENSSGRG00000025425)	rbp7b (ENSSGRG00000025426)	H6PD (ENSSGRG00000025427)	epha2a (ENSSGRG00000025474)	cntn4 (ENSSGRG00000025555)	ENSSGRG00000025833	ENSSGRG00000025974	ENSSGRG00000027559
Cyprininae	ANCESTRAL SPECIES	9	ENSGT00940000160123.e.b.a.a.b.c	ENSGT00940000160123.e.b.a.a.b.d.a	ENSGT00940000160123.e.b.a.a.a	ENSGT00390000013981.c	ENSGT00940000157748.y.a	ENSGT00940000160763.f	ENSGT01050000244882.a.a.b.b.b	ENSGT00940000153709.A.f.b	ENSGT00940000154899.fb.b.e	ENSGT00390000008325.b.a	ENSGT00940000157304	ENSGT00390000003017.c.b.c	ENSGT00940000156378.a.b.f.a	ENSGT00950000183004.a.a.b.e ##19	ENSGT00390000005497.`b.a #20	ENSGT00940000155048.d.b.b #22	ENSGT00940000154343.fb.b	ENSGT00530000063435.b.c	ENSGT00940000165103.b.g	ENSGT00840000129953.e	ENSGT00940000164786.a.a	ENSGT00940000167414.b	ENSGT00940000165371.a.b	ENSGT00940000155198.A.d	ENSGT00950000183062.a.a.a.k.b	ENSGT00940000162859.o.b	ENSGT00940000158065.a.b	ENSGT00390000007605.c	ENSGT00390000013995.b.a.o.a	ENSGT00940000167138.c	ENSGT00890000139436.A.a.c
Cyprininae_a	ANCESTRAL SPECIES	68	ENSGT01030000234648.a.b.a.a.a.f.b.d	ENSGT00940000160123.e.b.b.c	ENSGT00940000160123.e.b.a.b.d	ENSGT00940000160123.e.b.a.a.b.d.b	ENSGT00390000013981.d	ENSGT00940000157748.y.b	ENSGT00940000160763.e	ENSGT01050000244882.a.a.b.b.a	ENSGT00940000153709.A.f.a	ENSGT00940000154899.fb.b.f	ENSGT00940000157304	ENSGT00390000003017.c.b.c	ENSGT00940000156378.a.b.f.a	ENSGT00390000005497.ab #20	ENSGT00950000183004.a.a.b.e ##19	ENSGT00940000155048.d.b.b #22	ENSGT00940000154343.fb.b	ENSGT00530000063435.b.c	ENSGT00940000165103.b.g	ENSGT00840000129953.e	ENSGT00940000164786.a.a	ENSGT00940000167414.b	ENSGT00940000165371.a.b	ENSGT00940000155198.A.d	ENSGT00950000183062.a.a.a.k.b	ENSGT00940000162859.o.b	ENSGT00940000158065.a.b	ENSGT00390000007605.c	ENSGT00390000013995.b.a.o.a	ENSGT00940000167138.c	ENSGT00890000139436.A.a.c
Common carp reference	MODERN SPECIES	16	ENSCCRG00000022902	igfn1.1 (ENSCCRG00000061957)	ENSCCRG00000044705	zgc:66479 (ENSCCRG00000044701)	tarbp2 (ENSCCRG00000044694)	ENSCCRG00000044680	oxtrb (ENSCCRG00000001302)	ptgis (ENSCCRG00000043465)	ENSCCRG00000072372	stau1 (ENSCCRG00000051957)	pbrm1l (ENSCCRG00000051904)	ENSCCRG00000051146	FAM107A (ENSCCRG00000017297) #18	cfap20dc (ENSCCRG00000017302) #20	ENSCCRG00000061356 ##19	PTPRG (ENSCCRG00000071645) #22	tardbpb (ENSCCRG00000048153)	ENSCCRG00000057366	epha2a (ENSCCRG00000062010)	rbm19 (ENSCCRG00000007728)	cntn4 (ENSCCRG00000068682)	ENSCCRG00000005897	ENSCCRG00000064191	ENSCCRG00000036239	ENSCCRG00000052646	ENSCCRG00000025712	ENSCCRG00000057316	pdzrn3b (ENSCCRG00000007526)	ppp4r2b (ENSCCRG00000059825)	gxylt2 (ENSCCRG00000063702)	shq1 (ENSCCRG00000069665)
Goldfish	MODERN SPECIES	24	GRM4 (ENSCARG00000040594)	igfn1.1 (ENSCARG00000040941)	ENSCARG00000041190	zgc:66479 (ENSCARG00000041363)	tarbp2 (ENSCARG00000041417)	ENSCARG00000041481	oxtrb (ENSCARG00000041511)	ptgis (ENSCARG00000041534)	KCNB1 (ENSCARG00000041729)	ENSCARG00000041735	stau1 (ENSCARG00000041776)	pbrm1l (ENSCARG00000042350)	CAMK1 (ENSCARG00000043428)	ENSCARG00000044090 ##19	cfap20dc (ENSCARG00000044127) #20	PTPRG (ENSCARG00000044224) #22	tardbpb (ENSCARG00000046951)	H6PD (ENSCARG00000047425)	epha2a (ENSCARG00000047562)	rbm19 (ENSCARG00000047670)	cntn4 (ENSCARG00000048270)	ENSCARG00000056867	ENSCARG00000062000	ENSCARG00000064643	pdzrn3b (ENSCARG00000064823)	ppp4r2b (ENSCARG00000017325)	gxylt2 (ENSCARG00000017360)	shq1 (ENSCARG00000017391)	rybpb (ENSCARG00000017435)	prok2 (ENSCARG00000017460)	gpr27 (ENSCARG00000017466)
Zebrafish	MODERN SPECIES	21	zgc:66479 (ENSDARG00000008732)	tarbp2 (ENSDARG00000070471)	ENSDARG00000053311	oxtrb (ENSDARG00000044175)	ptgis (ENSDARG00000060094)	KCNB1 (ENSDARG00000060095)	ENSDARG00000079897	ENSDARG00000028862	stau1 (ENSDARG00000044182)	pbrm1l (ENSDARG00000077038)	CAMK1 (ENSDARG00000060116)	FAM107A (ENSDARG00000075540) #18	ENSDARG00000091625 ##19	ENSDARG00000096954	cfap20dc (ENSDARG00000026086) #20	PTPRG (ENSDARG00000060123) #22	tardbpb (ENSDARG00000040031)	cenps (ENSDARG00000070485)	rbp7b (ENSDARG00000070486)	H6PD (ENSDARG00000060153)	epha2a (ENSDARG00000017354)	rbm19 (ENSDARG00000042590)	cntn4 (ENSDARG00000098161)	ENSDARG00000112767	ENSDARG00000104277	ENSDARG00000103109	ENSDARG00000053454	pdzrn3b (ENSDARG00000073869)	ppp4r2b (ENSDARG00000053447)	gxylt2 (ENSDARG00000044191)	shq1 (ENSDARG00000058522)
Euteleosteomorpha	ANCESTRAL SPECIES	256	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.gb	ENSGT00940000158328	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00940000178103	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b
Acanthomorphata	ANCESTRAL SPECIES	6	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00940000178103	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Euacanthomorphacea	ANCESTRAL SPECIES	1	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00940000178103	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177	ENSGT00940000159296
Pinecone sodierfish	MODERN SPECIES	19	cav4a (ENSMMDG00005004685)	cav3 (ENSMMDG00005004692)	OXTR (ENSMMDG00005004715)	SRGAP3 (ENSMMDG00005004952)	ptgis (ENSMMDG00005012309)	KCNB1 (ENSMMDG00005012602)	ENSMMDG00005012607	ENSMMDG00005012611	stau1 (ENSMMDG00005012622)	pbrm1l (ENSMMDG00005012721)	CAMK1 (ENSMMDG00005013217)	ENSMMDG00005013228	ENSMMDG00005013232 ##19	ENSMMDG00005013244 #20	ENSMMDG00005013249 #20	PTPRG (ENSMMDG00005013274) #22	ENSMMDG00005013780	synprb (ENSMMDG00005013988) ##26	ENSMMDG00005014055	ENSMMDG00005014190	ENSMMDG00005014196	ENSMMDG00005014231	ENSMMDG00005014366	opn1mw1 (ENSMMDG00005003988)	slc6a22.2 (ENSMMDG00005004005)	slc6a22.1 (ENSMMDG00005004379)	fkbp5 (ENSMMDG00005005247)	srsf3a (ENSMMDG00005005266)	trub2 (ENSMMDG00005005268)	hdhd3 (ENSMMDG00005005270)	tgfa (ENSMMDG00005005273)
Percomorphaceae	ANCESTRAL SPECIES	1	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00940000178103	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177	ENSGT00940000159296
Tiger tail seahorse	MODERN SPECIES	460			grm2b (ENSHCOG00000018988)	rrp9 (ENSHCOG00000018967)	cav4a (ENSHCOG00000018903)	OXTR (ENSHCOG00000018896)	SRGAP3 (ENSHCOG00000018857)	ptgis (ENSHCOG00000018498)	KCNB1 (ENSHCOG00000018482)	ENSHCOG00000018473	stau1 (ENSHCOG00000018461)	pbrm1l (ENSHCOG00000018411)	CAMK1 (ENSHCOG00000018224)	ENSHCOG00000018205 ##19	ENSHCOG00000018188 #20	PTPRG (ENSHCOG00000018143) #22	ENSHCOG00000018022	synprb (ENSHCOG00000017944) ##26	opn1mw1 (ENSHCOG00000017910)	ENSHCOG00000017899	slc6a22.2 (ENSHCOG00000017881)	slc6a22.1 (ENSHCOG00000017840)	fkbp5 (ENSHCOG00000017809)	srsf3a (ENSHCOG00000017795)	ENSHCOG00000017776	trub2 (ENSHCOG00000017748)	ENSHCOG00000017718	tgfa (ENSHCOG00000017712)	SLC2A11 (ENSHCOG00000017703)	ENSHCOG00000017674	PATZ1 (ENSHCOG00000017644)
Percomorphaceae_B	ANCESTRAL SPECIES	3	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00940000178103	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177	ENSGT00940000159296
Ovalentaria	ANCESTRAL SPECIES	2	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00940000178103	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177	ENSGT00940000159296
Ovalentaria_B	ANCESTRAL SPECIES	5	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00940000178103	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177	ENSGT00940000159296
Pomacentridae	ANCESTRAL SPECIES	3	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Pomacentridae_A	ANCESTRAL SPECIES	2	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Amphiprion	ANCESTRAL SPECIES	49	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Clown anemonefish	MODERN SPECIES	1475	HTD2 (ENSAOCG00000012414) #12	rpp14 (ENSAOCG00000002310)	ABHD6 (ENSAOCG00000012378) #10	ENSAOCG00000012363	ENSAOCG00000012350	ptgis (ENSAOCG00000000759)	KCNB1 (ENSAOCG00000012301)	ENSAOCG00000012289	ENSAOCG00000012261	stau1 (ENSAOCG00000012224)	pbrm1l (ENSAOCG00000012154)	CAMK1 (ENSAOCG00000011985)	FAM107A (ENSAOCG00000011928) #18	ENSAOCG00000011870 ##19	ENSAOCG00000011812 #20	PTPRG (ENSAOCG00000011780) #22	ENSAOCG00000011557	synprb (ENSAOCG00000011312) ##26	ENSAOCG00000011271	ENSAOCG00000011243	ENSAOCG00000011229	slc6a22.2 (ENSAOCG00000000703)	slc6a22.1 (ENSAOCG00000010964)	fkbp5 (ENSAOCG00000000690)	srsf3a (ENSAOCG00000002405)	ENSAOCG00000000679	trub2 (ENSAOCG00000002330)	hdhd3 (ENSAOCG00000010837)	tgfa (ENSAOCG00000010826)	ENSAOCG00000010809	ENSAOCG00000010732
Orange clownfish	MODERN SPECIES	20	rrp9 (ENSAPEG00000011949)	ENSAPEG00000012049	cav4a (ENSAPEG00000012054)	OXTR (ENSAPEG00000012071)	SRGAP3 (ENSAPEG00000012088)	ptgis (ENSAPEG00000012169)	KCNB1 (ENSAPEG00000012207)	ENSAPEG00000012240	ENSAPEG00000012264	stau1 (ENSAPEG00000012308)	pbrm1l (ENSAPEG00000012360)	CAMK1 (ENSAPEG00000012457)	FAM107A (ENSAPEG00000012516) #18	ENSAPEG00000012558 ##19	cfap20dc (ENSAPEG00000012655) #20	PTPRG (ENSAPEG00000012727) #22	ENSAPEG00000012798	synprb (ENSAPEG00000012864) ##26	opn1mw1 (ENSAPEG00000012915)	slc6a22.2 (ENSAPEG00000012976)	slc6a22.1 (ENSAPEG00000013024)	fkbp5 (ENSAPEG00000013085)	srsf3a (ENSAPEG00000013125)	ENSAPEG00000013150	trub2 (ENSAPEG00000013177)	hdhd3 (ENSAPEG00000013199)	tgfa (ENSAPEG00000013206)	ENSAPEG00000013245	ENSAPEG00000013322	PATZ1 (ENSAPEG00000013354)	EIF4ENIF1 (ENSAPEG00000013379)
Spiny chromis	MODERN SPECIES	59	ENSAPOG00000016808	rrp9 (ENSAPOG00000016832)	cav4a (ENSAPOG00000016863)	OXTR (ENSAPOG00000016876)	SRGAP3 (ENSAPOG00000016964)	ptgis (ENSAPOG00000017080)	KCNB1 (ENSAPOG00000017097)	ENSAPOG00000017110	ENSAPOG00000017170	stau1 (ENSAPOG00000017260)	pbrm1l (ENSAPOG00000000473)	CAMK1 (ENSAPOG00000017490)	ENSAPOG00000017572 #18	ENSAPOG00000017615 ##19	ENSAPOG00000017625	PTPRG (ENSAPOG00000017779) #22	ENSAPOG00000017984	synprb (ENSAPOG00000018001) ##26	ENSAPOG00000018038	ENSAPOG00000018073	slc6a22.2 (ENSAPOG00000018086)	slc6a22.1 (ENSAPOG00000018136)	fkbp5 (ENSAPOG00000018147)	srsf3a (ENSAPOG00000018179)	ENSAPOG00000018190	trub2 (ENSAPOG00000018216)	trub2 (ENSAPOG00000018284)	hdhd3 (ENSAPOG00000018303)	tgfa (ENSAPOG00000018319)	ENSAPOG00000018375	ENSAPOG00000018431
Bicolor damselfish	MODERN SPECIES	246	rrp9 (ENSSPAG00000019524)	ENSSPAG00000019519	cav4a (ENSSPAG00000019508)	OXTR (ENSSPAG00000019480)	SRGAP3 (ENSSPAG00000019377)	ptgis (ENSSPAG00000019362)	KCNB1 (ENSSPAG00000019351)	ENSSPAG00000019324	ENSSPAG00000019296	stau1 (ENSSPAG00000019275)	pbrm1l (ENSSPAG00000019107)	CAMK1 (ENSSPAG00000019054)	FAM107A (ENSSPAG00000019002) #18	ENSSPAG00000018981 ##19	ENSSPAG00000018947	PTPRG (ENSSPAG00000018833) #22	ENSSPAG00000018760	synprb (ENSSPAG00000018733) ##26	ENSSPAG00000018720	ENSSPAG00000018702	odad3 (ENSSPAG00000018598)	slc6a22.2 (ENSSPAG00000018011)	slc6a22.1 (ENSSPAG00000017938)	fkbp5 (ENSSPAG00000017911)	srsf3a (ENSSPAG00000017902)	ENSSPAG00000017880	trub2 (ENSSPAG00000017865)	hdhd3 (ENSSPAG00000017863)	tgfa (ENSSPAG00000017847)	SLC2A11 (ENSSPAG00000017764)	ENSSPAG00000017723
Cichlidae	ANCESTRAL SPECIES	1	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00940000178103	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177	ENSGT00940000159296
Pseudocrenilabrinae	ANCESTRAL SPECIES	4	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.bb	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.cb	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	2	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.bb	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.cb	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177
Haplochromini	ANCESTRAL SPECIES	1	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.bb	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.cb	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177
Burton s mouthbrooder	MODERN SPECIES	356	rrp9 (ENSHBUG00000000019)	ENSHBUG00000001850	cav4a (ENSHBUG00000001843)	OXTR (ENSHBUG00000001833)	SRGAP3 (ENSHBUG00000023791)	ptgis (ENSHBUG00000000721)	KCNB1 (ENSHBUG00000023718)	ENSHBUG00000023703	ENSHBUG00000023677	stau1 (ENSHBUG00000023668)	pbrm1l (ENSHBUG00000023605)	CAMK1 (ENSHBUG00000023294)	FAM107A (ENSHBUG00000023239) #18	ENSHBUG00000023220 ##19	cfap20dc (ENSHBUG00000023060) #20	PTPRG (ENSHBUG00000023031) #22	ENSHBUG00000022995	synprb (ENSHBUG00000022658) ##26	ENSHBUG00000022646	ENSHBUG00000022586	ENSHBUG00000022547	slc6a22.2 (ENSHBUG00000022489)	slc6a22.1 (ENSHBUG00000022446)	fkbp5 (ENSHBUG00000022411)	srsf3a (ENSHBUG00000022402)	ENSHBUG00000022390	trub2 (ENSHBUG00000022384)	hdhd3 (ENSHBUG00000022347)	tgfa (ENSHBUG00000022338)	ENSHBUG00000022321
Haplochromini_A	ANCESTRAL SPECIES		ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.bb	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.cb	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177
Haplochromini_B	ANCESTRAL SPECIES		ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.bb	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.cb	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177
Eastern happy	MODERN SPECIES	17	grm2b (ENSACLG00000012648)	rrp9 (ENSACLG00000012583)	ENSACLG00000012571	OXTR (ENSACLG00000012539)	cav4a (ENSACLG00000012508)	SRGAP3 (ENSACLG00000012441)	ptgis (ENSACLG00000012392)	KCNB1 (ENSACLG00000012373)	ENSACLG00000012361	stau1 (ENSACLG00000012270)	pbrm1l (ENSACLG00000012002)	CAMK1 (ENSACLG00000011925)	FAM107A (ENSACLG00000011901) #18	ENSACLG00000011755 ##19	cfap20dc (ENSACLG00000011721) #20	PTPRG (ENSACLG00000011378) #22	ENSACLG00000011254	synprb (ENSACLG00000011098) ##26	ENSACLG00000011070	ENSACLG00000011041	ENSACLG00000011010	slc6a22.2 (ENSACLG00000010967)	slc6a22.1 (ENSACLG00000010928)	fkbp5 (ENSACLG00000010908)	srsf3a (ENSACLG00000010873)	ENSACLG00000010848	trub2 (ENSACLG00000010793)	hdhd3 (ENSACLG00000010788)	tgfa (ENSACLG00000010739)	SLC2A11 (ENSACLG00000010716)	ENSACLG00000010703
Zebra mbuna	MODERN SPECIES	1108	rrp9 (ENSMZEG00005015435)	ENSMZEG00005015456	cav4a (ENSMZEG00005015461)	OXTR (ENSMZEG00005015467)	SRGAP3 (ENSMZEG00005015480)	ptgis (ENSMZEG00005015522)	KCNB1 (ENSMZEG00005015573)	ENSMZEG00005015591	stau1 (ENSMZEG00005015605)	pbrm1l (ENSMZEG00005015649)	CAMK1 (ENSMZEG00005015730)	ENSMZEG00005015736 #18	ENSMZEG00005015745 ##19	ENSMZEG00005015770	ENSMZEG00005015780	PTPRG (ENSMZEG00005015811) #22	ENSMZEG00005015862	synprb (ENSMZEG00005015880) ##26	ENSMZEG00005015885	ENSMZEG00005015892	ENSMZEG00005015909	slc6a22.2 (ENSMZEG00005015949)	slc6a22.1 (ENSMZEG00005015991)	fkbp5 (ENSMZEG00005016000)	srsf3a (ENSMZEG00005016010)	ENSMZEG00005016014	trub2 (ENSMZEG00005016018)	hdhd3 (ENSMZEG00005016024)	tgfa (ENSMZEG00005016026)	ENSMZEG00005016033	ENSMZEG00005016042
P. nyererei	MODERN SPECIES	307	grm2b (ENSPNYG00000014736)	rrp9 (ENSPNYG00000014637)	ENSPNYG00000014602	cav4a (ENSPNYG00000014593)	OXTR (ENSPNYG00000014581)	SRGAP3 (ENSPNYG00000014550)	ptgis (ENSPNYG00000014521)	KCNB1 (ENSPNYG00000014507)	ENSPNYG00000014472	stau1 (ENSPNYG00000014436)	pbrm1l (ENSPNYG00000014336)	CAMK1 (ENSPNYG00000014260)	ENSPNYG00000014239 #18	ENSPNYG00000014199 ##19	ENSPNYG00000014163	PTPRG (ENSPNYG00000014118) #22	ENSPNYG00000014061	synprb (ENSPNYG00000014029) ##26	ENSPNYG00000014010	ENSPNYG00000013994	ENSPNYG00000013978	slc6a22.2 (ENSPNYG00000013897)	slc6a22.1 (ENSPNYG00000013819)	fkbp5 (ENSPNYG00000013801)	srsf3a (ENSPNYG00000013747)	ENSPNYG00000013698	trub2 (ENSPNYG00000013666)	hdhd3 (ENSPNYG00000013649)	tgfa (ENSPNYG00000013629)	SLC2A11 (ENSPNYG00000013599)	ENSPNYG00000013570
Lyretail cichlid	MODERN SPECIES	294	grm2b (ENSNBRG00000018053)	rrp9 (ENSNBRG00000017987)	ENSNBRG00000017957	cav4a (ENSNBRG00000017945)	OXTR (ENSNBRG00000017883)	SRGAP3 (ENSNBRG00000017824)	ptgis (ENSNBRG00000017712)	KCNB1 (ENSNBRG00000017665)	ENSNBRG00000017633	stau1 (ENSNBRG00000017596)	pbrm1l (ENSNBRG00000017496)	CAMK1 (ENSNBRG00000017444)	FAM107A (ENSNBRG00000017436) #18	ENSNBRG00000017372 ##19	ENSNBRG00000017330 #20	PTPRG (ENSNBRG00000017259) #22	ENSNBRG00000017208	synprb (ENSNBRG00000017171) ##26	ENSNBRG00000016907	ENSNBRG00000016841	ENSNBRG00000016795	slc6a22.2 (ENSNBRG00000016737)	slc6a22.1 (ENSNBRG00000016451)	fkbp5 (ENSNBRG00000016378)	srsf3a (ENSNBRG00000016360)	ENSNBRG00000016337	trub2 (ENSNBRG00000016294)	hdhd3 (ENSNBRG00000016279)	tgfa (ENSNBRG00000016157)	ENSNBRG00000016097	ENSNBRG00000016070
Nile tilapia	MODERN SPECIES	17	rrp9 (ENSONIG00000004124)	ENSONIG00000004129	cav4a (ENSONIG00000004130)	OXTR (ENSONIG00000037102)	ENSONIG00000035170	SRGAP3 (ENSONIG00000004135)	ptgis (ENSONIG00000004143)	KCNB1 (ENSONIG00000004149)	ENSONIG00000004150	stau1 (ENSONIG00000004152)	pbrm1l (ENSONIG00000004158)	CAMK1 (ENSONIG00000004166)	FAM107A (ENSONIG00000004173) #18	ENSONIG00000004174 ##19	cfap20dc (ENSONIG00000004176) #20	PTPRG (ENSONIG00000004184) #22	ENSONIG00000004194	synprb (ENSONIG00000004202) ##26	ENSONIG00000004204	ENSONIG00000004206	ENSONIG00000004207	slc6a22.2 (ENSONIG00000004210)	slc6a22.1 (ENSONIG00000004216)	srsf3a (ENSONIG00000004224)	fkbp5 (ENSONIG00000004221)	ENSONIG00000039490	trub2 (ENSONIG00000004230)	hdhd3 (ENSONIG00000004233)	tgfa (ENSONIG00000035959)	ENSONIG00000004236	ENSONIG00000004244
Midas cichlid	MODERN SPECIES	1343	rrp9 (ENSACIG00000015770)	ENSACIG00000015804	cav4a (ENSACIG00000015811)	OXTR (ENSACIG00000015830)	SRGAP3 (ENSACIG00000015847)	ptgis (ENSACIG00000015884)	KCNB1 (ENSACIG00000015902)	ENSACIG00000015908	stau1 (ENSACIG00000015918)	pbrm1l (ENSACIG00000015948)	CAMK1 (ENSACIG00000016025)	FAM107A (ENSACIG00000016041) #18	ENSACIG00000016060 ##19	ENSACIG00000016098	ENSACIG00000016112 #20	PTPRG (ENSACIG00000016138) #22	ENSACIG00000016210	synprb (ENSACIG00000016263) ##26	ENSACIG00000016277	ENSACIG00000016288	slc6a22.2 (ENSACIG00000016308)	ENSACIG00000016335	slc6a22.1 (ENSACIG00000016350)	fkbp5 (ENSACIG00000016383)	srsf3a (ENSACIG00000016419)	ENSACIG00000016471	trub2 (ENSACIG00000016500)	hdhd3 (ENSACIG00000016541)	tgfa (ENSACIG00000016584)	SLC2A11 (ENSACIG00000016741)	PATZ1 (ENSACIG00000016779)
Atherinomorphae	ANCESTRAL SPECIES	2	ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00530000069347	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Cyprinodontiformes	ANCESTRAL SPECIES	2	ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00530000069347	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Aplocheiloidei	ANCESTRAL SPECIES	10	ENSGT00940000165239.a	ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Mangrove rivulus	MODERN SPECIES	10	ENSKMAG00000006717	TEX264 (ENSKMAG00000006733)	grm2b (ENSKMAG00000006751)	rrp9 (ENSKMAG00000006788)	ENSKMAG00000006803	cav4a (ENSKMAG00000006815)	OXTR (ENSKMAG00000006821)	SRGAP3 (ENSKMAG00000006834)	ptgis (ENSKMAG00000006899)	KCNB1 (ENSKMAG00000007106)	stau1 (ENSKMAG00000007135)	pbrm1l (ENSKMAG00000007201)	CAMK1 (ENSKMAG00000007272)	ENSKMAG00000007313 ##19	ENSKMAG00000007328 #20	PTPRG (ENSKMAG00000007347) #22	ENSKMAG00000007463	synprb (ENSKMAG00000007673) ##26	ENSKMAG00000007693	ENSKMAG00000007725	slc6a22.2 (ENSKMAG00000007753)	slc6a22.1 (ENSKMAG00000007782)	fkbp5 (ENSKMAG00000007812)	srsf3a (ENSKMAG00000007829)	ENSKMAG00000007843	trub2 (ENSKMAG00000007861)	tgfa (ENSKMAG00000007895)	hdhd3 (ENSKMAG00000007904)	ENSKMAG00000007971	ENSKMAG00000008127	PATZ1 (ENSKMAG00000008157)
Turquoise killifish	MODERN SPECIES	1619	cav4a (ENSNFUG00015006961)	ENSNFUG00015006959	OXTR (ENSNFUG00015006954)	ENSNFUG00015006951	SRGAP3 (ENSNFUG00015005261)	PTGIS (ENSNFUG00015004815)	KCNB1 (ENSNFUG00015004774)	STAU1 (ENSNFUG00015004728)	pbrm1l (ENSNFUG00015025092)	CAMK1 (ENSNFUG00015024900)	ENSNFUG00015024861 ##19	cfap20dc (ENSNFUG00015024860) #20	ENSNFUG00015024858	ENSNFUG00015024857	ENSNFUG00015024855	CA16B (ENSNFUG00015024541) #22	CADPSB (ENSNFUG00015022397)	SYNPR (ENSNFUG00015022226) ##26	opn1mw1 (ENSNFUG00015022200)	SLC6A13 (ENSNFUG00015022130)	fkbp5 (ENSNFUG00015022105)	srsf3a (ENSNFUG00015022103)	ENSNFUG00015022099	trub2 (ENSNFUG00015022069)	HDHD3 (ENSNFUG00015022062)	tgfa (ENSNFUG00015022056)	ENSNFUG00015021803	PATZ1 (ENSNFUG00015021798)	EIF4ENIF1 (ENSNFUG00015021787)	ENSNFUG00015021783	SIRT4 (ENSNFUG00015021777)
Cyprinodontoidei	ANCESTRAL SPECIES	4	ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00530000069347	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Poeciliinae	ANCESTRAL SPECIES	4	ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00530000069347	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b.b	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Poecilia	ANCESTRAL SPECIES	23	ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00530000069347	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b.b	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
NAME_6	ANCESTRAL SPECIES	7	ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00530000069347	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b.b	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Sailfin molly	MODERN SPECIES	589																PTPRG (ENSPLAG00000009190) #22	ENSPLAG00000009176
Amazon molly	MODERN SPECIES	254	ENSPFOG00000016923	TEX264 (ENSPFOG00000016925)	grm2b (ENSPFOG00000016927)	rrp9 (ENSPFOG00000016947)	ENSPFOG00000016991	ENSPFOG00000016992	cav4a (ENSPFOG00000016995)	OXTR (ENSPFOG00000016999)	SRGAP3 (ENSPFOG00000017034)	ptgis (ENSPFOG00000017222)	KCNB1 (ENSPFOG00000017250)	stau1 (ENSPFOG00000017253)	pbrm1l (ENSPFOG00000017300)	CAMK1 (ENSPFOG00000017343)	cfap20dc (ENSPFOG00000017372) #20	PTPRG (ENSPFOG00000017406) #22	ENSPFOG00000017467	synprb (ENSPFOG00000017471) ##26	ENSPFOG00000017487	ENSPFOG00000017510	slc6a22.2 (ENSPFOG00000017541)	slc6a22.1 (ENSPFOG00000017791)	fkbp5 (ENSPFOG00000017970)	srsf3a (ENSPFOG00000018005)	ENSPFOG00000024194	trub2 (ENSPFOG00000018018)	hdhd3 (ENSPFOG00000018032)	tgfa (ENSPFOG00000022903)	SLC2A11 (ENSPFOG00000018035)	PATZ1 (ENSPFOG00000018058)	EIF4ENIF1 (ENSPFOG00000018072)
Guppy	MODERN SPECIES	457	ENSPREG00000003754	grm2b (ENSPREG00000003710)	rrp9 (ENSPREG00000003687)	ENSPREG00000003676	cav4a (ENSPREG00000003651)	ENSPREG00000003638	OXTR (ENSPREG00000003635)	SRGAP3 (ENSPREG00000003536)	ptgis (ENSPREG00000003505)	KCNB1 (ENSPREG00000003499)	stau1 (ENSPREG00000003477)	pbrm1l (ENSPREG00000003383)	CAMK1 (ENSPREG00000003322)	ENSPREG00000003296 ##19	cfap20dc (ENSPREG00000003271) #20	PTPRG (ENSPREG00000003236) #22	ENSPREG00000002986	synprb (ENSPREG00000002900) ##26	ENSPREG00000002827	ENSPREG00000002751	slc6a22.2 (ENSPREG00000002732)	slc6a22.1 (ENSPREG00000002693)	fkbp5 (ENSPREG00000002675)	srsf3a (ENSPREG00000002610)	ENSPREG00000002590	trub2 (ENSPREG00000002549)	hdhd3 (ENSPREG00000002532)	tgfa (ENSPREG00000002503)	SLC2A11 (ENSPREG00000002470)	PATZ1 (ENSPREG00000002440)	EIF4ENIF1 (ENSPREG00000002386)
Platyfish	MODERN SPECIES	12	ENSXMAG00000023148	TEX264 (ENSXMAG00000029495)	grm2b (ENSXMAG00000016335)	rrp9 (ENSXMAG00000016308)	ENSXMAG00000019600	cav4a (ENSXMAG00000016303)	OXTR (ENSXMAG00000016299)	SRGAP3 (ENSXMAG00000016217)	ptgis (ENSXMAG00000016194)	KCNB1 (ENSXMAG00000016193)	stau1 (ENSXMAG00000016175)	pbrm1l (ENSXMAG00000016160)	CAMK1 (ENSXMAG00000016140)	ENSXMAG00000027028 ##19	cfap20dc (ENSXMAG00000014709) #20	PTPRG (ENSXMAG00000023102) #22	ENSXMAG00000015230	ENSXMAG00000022668	synprb (ENSXMAG00000015238) ##26	ENSXMAG00000015253	ENSXMAG00000015275	slc6a22.2 (ENSXMAG00000015285)	slc6a22.1 (ENSXMAG00000015360)	fkbp5 (ENSXMAG00000015416)	srsf3a (ENSXMAG00000015454)	ENSXMAG00000029063	trub2 (ENSXMAG00000015478)	hdhd3 (ENSXMAG00000015492)	tgfa (ENSXMAG00000015497)	ENSXMAG00000015500	PATZ1 (ENSXMAG00000015531)
NAME_4	ANCESTRAL SPECIES	14	ENSGT00940000165239.a	ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b.w.b	ENSGT00940000161061.b.x	ENSGT00940000159296
Mummichog	MODERN SPECIES	2305			grm2b (ENSFHEG00000013306)	rrp9 (ENSFHEG00000013392)	ENSFHEG00000013403	cav4a (ENSFHEG00000013419)	OXTR (ENSFHEG00000013425)	SRGAP3 (ENSFHEG00000013436)	ptgis (ENSFHEG00000013447)	KCNB1 (ENSFHEG00000013464)	stau1 (ENSFHEG00000013517)	pbrm1l (ENSFHEG00000013719)	CAMK1 (ENSFHEG00000013750)	ENSFHEG00000013771 ##19	cfap20dc (ENSFHEG00000013787) #20	PTPRG (ENSFHEG00000013802) #22	ENSFHEG00000013898	synprb (ENSFHEG00000014323) ##26	ENSFHEG00000014365	slc6a22.2 (ENSFHEG00000014474)	slc6a22.1 (ENSFHEG00000014526)	fkbp5 (ENSFHEG00000014553)	srsf3a (ENSFHEG00000014610)	ENSFHEG00000014620	trub2 (ENSFHEG00000014655)	hdhd3 (ENSFHEG00000014663)	tgfa (ENSFHEG00000014669)	ENSFHEG00000014705	ENSFHEG00000014726	PATZ1 (ENSFHEG00000014755)	EIF4ENIF1 (ENSFHEG00000014788)
Sheepshead minnow	MODERN SPECIES	687																PTPRG (ENSCVAG00000022254) #22	ENSCVAG00000022227
Oryzias	ANCESTRAL SPECIES	1	ENSGT00940000165239.a	ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.x	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.w	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296
Oryzias_b	ANCESTRAL SPECIES	3	ENSGT00940000165239.a	ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.x	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.w	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296
Indian medaka	MODERN SPECIES	8	nol4lb (ENSOMEG00000008289)	commd7 (ENSOMEG00000008142)	dnmt3bb.1 (ENSOMEG00000008096)	ENSOMEG00000008030	dnmt3bb.2 (ENSOMEG00000008012)	mapre1b (ENSOMEG00000007955)	acss2 (ENSOMEG00000007920)	tafazzin (ENSOMEG00000007792)	atp6ap1a (ENSOMEG00000007690)	ENSOMEG00000007630	ENSOMEG00000007579	ENSOMEG00000007557	ENSOMEG00000007539	ENSOMEG00000007525	ENSOMEG00000007506	PTPRG (ENSOMEG00000007483) #22	ENSOMEG00000007413	synprb (ENSOMEG00000007182) ##26	ENSOMEG00000007148	ENSOMEG00000007091	ENSOMEG00000007059	slc6a22.2 (ENSOMEG00000007010)	slc6a22.1 (ENSOMEG00000006935)	fkbp5 (ENSOMEG00000006787)	srsf3a (ENSOMEG00000006746)	ENSOMEG00000006718	trub2 (ENSOMEG00000006702)	hdhd3 (ENSOMEG00000006682)	tgfa (ENSOMEG00000006671)	SLC2A11 (ENSOMEG00000006658)	PATZ1 (ENSOMEG00000006636)
Javanese ricefish	MODERN SPECIES	19	BRK1 (ENSOJAG00000001560)	ENSOJAG00000001568	ENSOJAG00000001575	grm2b (ENSOJAG00000001598)	ENSOJAG00000001743	cav4a (ENSOJAG00000001753)	OXTR (ENSOJAG00000001760)	SRGAP3 (ENSOJAG00000001990)	ptgis (ENSOJAG00000003197)	KCNB1 (ENSOJAG00000003247)	stau1 (ENSOJAG00000003262)	pbrm1l (ENSOJAG00000003954)	CAMK1 (ENSOJAG00000009200)	ENSOJAG00000009882 ##19	cfap20dc (ENSOJAG00000009907) #20	PTPRG (ENSOJAG00000010037) #22	ENSOJAG00000012081	synprb (ENSOJAG00000012866) ##26	ENSOJAG00000012883	ENSOJAG00000012957	slc6a22.2 (ENSOJAG00000013176)	slc6a22.1 (ENSOJAG00000013860)	fkbp5 (ENSOJAG00000014430)	srsf3a (ENSOJAG00000014634)	ENSOJAG00000014707	trub2 (ENSOJAG00000014724)	hdhd3 (ENSOJAG00000014754)	tgfa (ENSOJAG00000014767)	SLC2A11 (ENSOJAG00000014798)	PATZ1 (ENSOJAG00000015149)	EIF4ENIF1 (ENSOJAG00000015181)
Oryzias_a	ANCESTRAL SPECIES	190																ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b
Japanese Medaka HdrR	MODERN SPECIES	19															ENSORLG00000027895	PTPRG (ENSORLG00000020215) #22	ENSORLG00000030464	ENSORLG00000025356	synprb (ENSORLG00000026402) ##26	ENSORLG00000020133	ENSORLG00000028704	kfh-g (ENSORLG00000020100)	ENSORLG00000023153	slc6a22.1 (ENSORLG00000020091)	fkbp5 (ENSORLG00000029600)	srsf3a (ENSORLG00000020054)	ENSORLG00000024741	trub2 (ENSORLG00000020011)	hdhd3 (ENSORLG00000028269)	tgfa (ENSORLG00000023298)	SLC2A11 (ENSORLG00000019991)
Chinese medaka	MODERN SPECIES	1072																ENSOSIG00000016988 #22	ENSOSIG00000011280	ENSOSIG00000011216
Percomorphaceae_C	ANCESTRAL SPECIES	1	ENSGT00530000069347	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177	ENSGT00940000159296
Percomorphaceae_D	ANCESTRAL SPECIES	3	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Anabantaria	ANCESTRAL SPECIES		ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071	ENSGT00940000154110.a
Anabantoidei	ANCESTRAL SPECIES	1	ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.b.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Climbing perch	MODERN SPECIES	18	grm2b (ENSATEG00000024646)	rrp9 (ENSATEG00000024640)	ENSATEG00000024638	cav4a (ENSATEG00000024636)	ENSATEG00000024633	ENSATEG00000024620	ptgis (ENSATEG00000024612)	ENSATEG00000024609	ENSATEG00000024607	stau1 (ENSATEG00000024600)	pbrm1l (ENSATEG00000024583)	ENSATEG00000024573	ENSATEG00000024569 ##19	ENSATEG00000029054	cfap20dc (ENSATEG00000024563) #20	ENSATEG00000024537 #22	ENSATEG00000024512	synprb (ENSATEG00000024507) ##26	ENSATEG00000027793	ENSATEG00000029137	ENSATEG00000027686	slc6a22.2 (ENSATEG00000011564)	slc6a22.1 (ENSATEG00000011540)	fkbp5 (ENSATEG00000011527)	srsf3a (ENSATEG00000011511)	ENSATEG00000011482	ENSATEG00000011371	hdhd3 (ENSATEG00000011364)	tgfa (ENSATEG00000011337)	ENSATEG00000011327	PATZ1 (ENSATEG00000027651)
Siamese fighting fish	MODERN SPECIES	16	TEX264 (ENSBSLG00000014251)	grm2b (ENSBSLG00000014228)	rrp9 (ENSBSLG00000013376)	ENSBSLG00000013072	cav4a (ENSBSLG00000013039)	OXTR (ENSBSLG00000012650)	SRGAP3 (ENSBSLG00000009662)	ptgis (ENSBSLG00000009572)	KCNB1 (ENSBSLG00000009571)	stau1 (ENSBSLG00000009518)	pbrm1l (ENSBSLG00000009393)	CAMK1 (ENSBSLG00000008335)	ENSBSLG00000003501 ##19	ENSBSLG00000003498 #20	ENSBSLG00000003497	PTPRG (ENSBSLG00000003489) #22	ENSBSLG00000003452	synprb (ENSBSLG00000003422) ##26	ENSBSLG00000003420	ENSBSLG00000003418	slc6a22.2 (ENSBSLG00000003417)	slc6a22.1 (ENSBSLG00000003405)	fkbp5 (ENSBSLG00000003377)	srsf3a (ENSBSLG00000003375)	ENSBSLG00000003374	trub2 (ENSBSLG00000003373)	hdhd3 (ENSBSLG00000003370)	tgfa (ENSBSLG00000003369)	SLC2A11 (ENSBSLG00000003366)	PATZ1 (ENSBSLG00000003365)	EIF4ENIF1 (ENSBSLG00000003363)
Zig-zag eel	MODERN SPECIES	19	TEX264 (ENSMAMG00000017390)	grm2b (ENSMAMG00000017406)	rrp9 (ENSMAMG00000017427)	ENSMAMG00000017440	cav4a (ENSMAMG00000017443)	ENSMAMG00000027583	ENSMAMG00000025453	ENSMAMG00000017479	ptgis (ENSMAMG00000017564)	ENSMAMG00000017578	stau1 (ENSMAMG00000017586)	pbrm1l (ENSMAMG00000017609)	ENSMAMG00000017713	ENSMAMG00000017723	ENSMAMG00000017732 #20	ENSMAMG00000017759 #22	ENSMAMG00000017890	synprb (ENSMAMG00000017945) ##26	ENSMAMG00000018094	slc6a22.2 (ENSMAMG00000023626)	slc6a22.1 (ENSMAMG00000023629)	fkbp5 (ENSMAMG00000023634)	srsf3a (ENSMAMG00000023637)	ENSMAMG00000023640	ENSMAMG00000023643	hdhd3 (ENSMAMG00000027507)	tgfa (ENSMAMG00000027992)	ENSMAMG00000023647	PATZ1 (ENSMAMG00000024829)	EIF4ENIF1 (ENSMAMG00000023655)	ENSMAMG00000023657
Carangaria	ANCESTRAL SPECIES	3	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071	ENSGT00940000166668	ENSGT00940000154388	ENSGT00940000158891	ENSGT00390000002240
Carangaria_A	DUPLICATION
Carangaria_A	ANCESTRAL SPECIES																	ENSGT00940000155048.d.b.c #22
Seriola	ANCESTRAL SPECIES																	ENSGT00940000155048.d.b.c #22
Yellowtail amberjack	MODERN SPECIES	388																ENSSLDG00000008189 #22
Carangaria_A	ANCESTRAL SPECIES	7	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b.d #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071	ENSGT00940000154388	ENSGT00940000158891	ENSGT00390000002240	ENSGT00390000002376
Barramundi perch	MODERN SPECIES	346	cav4a (ENSLCAG00010009508)	cav3 (ENSLCAG00010009510)	OXTR (ENSLCAG00010009513)	SRGAP3 (ENSLCAG00010009556)	ptgis (ENSLCAG00010009685)	KCNB1 (ENSLCAG00010009693)	ENSLCAG00010009695	ENSLCAG00010009704	ENSLCAG00010009708	stau1 (ENSLCAG00010009716)	pbrm1l (ENSLCAG00010009764)	CAMK1 (ENSLCAG00010009838)	FAM107A (ENSLCAG00010009844) #18	ENSLCAG00010009848 ##19	cfap20dc (ENSLCAG00010009859) #20	PTPRG (ENSLCAG00010009905) #22	ENSLCAG00010010421	synprb (ENSLCAG00010012532) ##26	ENSLCAG00010012667	ENSLCAG00010013145
Seriola	ANCESTRAL SPECIES	20	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT00950000183006.B.f.b.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b.d #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.c	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.d	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296
Yellowtail amberjack	MODERN SPECIES	2920								ENSSLDG00000025066	ENSSLDG00000025055	stau1 (ENSSLDG00000025040)	pbrm1l (ENSSLDG00000025003)	CAMK1 (ENSSLDG00000024978)	ENSSLDG00000024971	ENSSLDG00000024962 ##19	cfap20dc (ENSSLDG00000024956) #20	PTPRG (ENSSLDG00000024938) #22	ENSSLDG00000024839	synprb (ENSSLDG00000024813) ##26	ENSSLDG00000024804	ENSSLDG00000024799	ENSSLDG00000024797	ENSSLDG00000024793	slc6a22.2 (ENSSLDG00000024762)	slc6a22.1 (ENSSLDG00000024738)	fkbp5 (ENSSLDG00000024729)	srsf3a (ENSSLDG00000024723)	ENSSLDG00000024714	trub2 (ENSSLDG00000024701)	hdhd3 (ENSSLDG00000024696)	tgfa (ENSSLDG00000024688)	ENSSLDG00000024676
Greater amberjack	MODERN SPECIES	47	cav4a (ENSSDUG00000019674)	cav3 (ENSSDUG00000019657)	OXTR (ENSSDUG00000019650)	SRGAP3 (ENSSDUG00000019582)	ptgis (ENSSDUG00000019508)	KCNB1 (ENSSDUG00000019497)	ENSSDUG00000019489	ENSSDUG00000019462	stau1 (ENSSDUG00000019439)	pbrm1l (ENSSDUG00000019381)	CAMK1 (ENSSDUG00000019354)	FAM107A (ENSSDUG00000019338) #18	ENSSDUG00000019238 ##19	cfap20dc (ENSSDUG00000019218) #20	ENSSDUG00000019206	PTPRG (ENSSDUG00000019155) #22	ENSSDUG00000019087	synprb (ENSSDUG00000019054) ##26	ENSSDUG00000019040	ENSSDUG00000019022	ENSSDUG00000019004	ENSSDUG00000017178	slc6a22.2 (ENSSDUG00000017092)	slc6a22.1 (ENSSDUG00000017029)	fkbp5 (ENSSDUG00000017003)	srsf3a (ENSSDUG00000016982)	ENSSDUG00000016963	trub2 (ENSSDUG00000016928)	hdhd3 (ENSSDUG00000016917)	tgfa (ENSSDUG00000016889)	SLC2A11 (ENSSDUG00000016856)
Pleuronectoidei	ANCESTRAL SPECIES	4	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b.u.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Tongue sole	MODERN SPECIES	2	TEX264 (ENSCSEG00000000643)	grm2b (ENSCSEG00000000650)	rrp9 (ENSCSEG00000000656)	ENSCSEG00000000662	cav4a (ENSCSEG00000000668)	OXTR (ENSCSEG00000000683)	SRGAP3 (ENSCSEG00000000715)	ptgis (ENSCSEG00000000773)	KCNB1 (ENSCSEG00000000781)	ENSCSEG00000000785	stau1 (ENSCSEG00000000792)	pbrm1l (ENSCSEG00000000804)	CAMK1 (ENSCSEG00000000819)	ENSCSEG00000000831 ##19	cfap20dc (ENSCSEG00000000837) #20	PTPRG (ENSCSEG00000000859) #22	ENSCSEG00000000914	synprb (ENSCSEG00000001065) ##26	ENSCSEG00000001074	ENSCSEG00000001078	slc6a22.2 (ENSCSEG00000001079)	slc6a22.1 (ENSCSEG00000001110)	slc6a22.1 (ENSCSEG00000001298)	fkbp5 (ENSCSEG00000001306)	srsf3a (ENSCSEG00000001311)	ENSCSEG00000001322	trub2 (ENSCSEG00000001331)	hdhd3 (ENSCSEG00000001353)	tgfa (ENSCSEG00000001356)	ENSCSEG00000001362	ENSCSEG00000001380
Turbot	MODERN SPECIES	18	rrp9 (ENSSMAG00000017210)	ENSSMAG00000017213	cav4a (ENSSMAG00000017214)	CAV3 (ENSSMAG00000017215)	ENSSMAG00000017218	SRGAP3 (ENSSMAG00000017241)	ptgis (ENSSMAG00000017341)	ENSSMAG00000029776	ENSSMAG00000017363	ENSSMAG00000017385	stau1 (ENSSMAG00000017410)	pbrm1l (ENSSMAG00000017461)	ENSSMAG00000017597	ENSSMAG00000017637 ##19	cfap20dc (ENSSMAG00000017654) #20	ENSSMAG00000017683 #22	ENSSMAG00000017781	synprb (ENSSMAG00000022669) ##26	RH2-B2 (ENSSMAG00000018144)	RH2-B1 (ENSSMAG00000018084)	RH2-A1 (ENSSMAG00000018072)	slc6a22.2 (ENSSMAG00000020739)	slc6a22.1 (ENSSMAG00000020801)	fkbp5 (ENSSMAG00000020806)	srsf3a (ENSSMAG00000020812)	ENSSMAG00000033456	ENSSMAG00000020820	hdhd3 (ENSSMAG00000020823)	tgfa (ENSSMAG00000020829)	ENSSMAG00000020832	ENSSMAG00000020843
Eupercaria	ANCESTRAL SPECIES		ENSGT00530000069347	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379.h	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177	ENSGT00940000159296
Tetraodontidae	ANCESTRAL SPECIES	1	ENSGT00390000016901.a	ENSGT01030000234595.B.c.a.d	ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379.h	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Fugu	MODERN SPECIES	10	TEX264 (ENSTRUG00000020425)	grm2b (ENSTRUG00000007956)	rrp9 (ENSTRUG00000007858)	ENSTRUG00000021435	cav4a (ENSTRUG00000007707)	OXTR (ENSTRUG00000007606)	SRGAP3 (ENSTRUG00000006997)	ptgis (ENSTRUG00000006596)	KCNB1 (ENSTRUG00000006520)	ENSTRUG00000006351	stau1 (ENSTRUG00000005837)	pbrm1l (ENSTRUG00000005335)	CAMK1 (ENSTRUG00000005116)	ENSTRUG00000021663 #18	ENSTRUG00000024993 ##19	PTPRG (ENSTRUG00000004636) #22	ENSTRUG00000003536	synprb (ENSTRUG00000003258) ##26	ENSTRUG00000002372	ENSTRUG00000002306	slc6a22.2 (ENSTRUG00000003335)	slc6a22.2 (ENSTRUG00000003053)	slc6a22.1 (ENSTRUG00000032801)	slc6a22.1 (ENSTRUG00000028380)	fkbp5 (ENSTRUG00000015512)	srsf3a (ENSTRUG00000023965)	ENSTRUG00000022896	trub2 (ENSTRUG00000015499)	hdhd3 (ENSTRUG00000033187)	tgfa (ENSTRUG00000024683)	SLC2A11 (ENSTRUG00000015382)
Tetraodon	MODERN SPECIES	2	ENSTNIG00000000779	SLC38A3 (ENSTNIG00000014743)	rbm5 (ENSTNIG00000014742)	BRK1 (ENSTNIG00000000700)	grm2b (ENSTNIG00000014741)	rrp9 (ENSTNIG00000014740)	cav4a (ENSTNIG00000014738)	OXTR (ENSTNIG00000014737)	SRGAP3 (ENSTNIG00000014736)	ptgis (ENSTNIG00000014735)	KCNB1 (ENSTNIG00000014734)	ENSTNIG00000014733	stau1 (ENSTNIG00000014732)	pbrm1l (ENSTNIG00000014731)	CAMK1 (ENSTNIG00000014730)	PTPRG (ENSTNIG00000014729) #22	ENSTNIG00000014728	synprb (ENSTNIG00000014727) ##26	opn1mw1 (ENSTNIG00000014726)	ENSTNIG00000000105	slc6a22.2 (ENSTNIG00000014725)	slc6a22.1 (ENSTNIG00000014724)	fkbp5 (ENSTNIG00000014723)	srsf3a (ENSTNIG00000001003)	ENSTNIG00000014722	trub2 (ENSTNIG00000014721)	hdhd3 (ENSTNIG00000001351)	tgfa (ENSTNIG00000014720)	EIF4ENIF1 (ENSTNIG00000014719)	ENSTNIG00000014718	PATZ1 (ENSTNIG00000014714)
Eupecaria_A	ANCESTRAL SPECIES		ENSGT00530000069347	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379.h	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177	ENSGT00940000159296
Ballan wrasse	MODERN SPECIES	22	grm2b (ENSLBEG00000020644)	rrp9 (ENSLBEG00000020591)	ENSLBEG00000020573	cav4a (ENSLBEG00000020549)	OXTR (ENSLBEG00000020536)	SRGAP3 (ENSLBEG00000020365)	ptgis (ENSLBEG00000020301)	KCNB1 (ENSLBEG00000020282)	ENSLBEG00000020255	ENSLBEG00000020222	stau1 (ENSLBEG00000020172)	pbrm1l (ENSLBEG00000019996)	CAMK1 (ENSLBEG00000019877)	ENSLBEG00000019842 #18	ENSLBEG00000019817 ##19	PTPRG (ENSLBEG00000019629) #22	ENSLBEG00000019560
Eupecaria_B	ANCESTRAL SPECIES	2	ENSGT00530000069347	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379.h	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177	ENSGT00940000159296
Eupecaria_C	ANCESTRAL SPECIES		ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379.h	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177	ENSGT00940000159296
Eupercaria_incertae_sedis	ANCESTRAL SPECIES		ENSGT00940000158328	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379.h	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
European seabass	MODERN SPECIES	10	grm2b (ENSDLAG00005023208)	rrp9 (ENSDLAG00005023132)	ENSDLAG00005023122	cav4a (ENSDLAG00005030654)	ENSDLAG00005023113	ENSDLAG00005022263	ptgis (ENSDLAG00005022212)	ENSDLAG00005022209	ENSDLAG00005022207	ENSDLAG00005022190	pbrm1l (ENSDLAG00005021862)	ENSDLAG00005020763	FAM107A (ENSDLAG00005018013) #18	ENSDLAG00005020713 ##19	cfap20dc (ENSDLAG00005020705) #20	PTPRG (ENSDLAG00005018629) #22	ENSDLAG00005011443	ENSDLAG00005011156	synprb (ENSDLAG00005032345) ##26	ENSDLAG00005020236	ENSDLAG00005018127	slc6a22.1 (ENSDLAG00005032723)	ENSDLAG00005030434	ENSDLAG00005019649	ENSDLAG00005003100	slc6a22.2 (ENSDLAG00005028850)	slc6a22.1 (ENSDLAG00005033698)	fkbp5 (ENSDLAG00005031856)	ENSDLAG00005023244	ENSDLAG00005023240	hdhd3 (ENSDLAG00005023238)
Large yellow croaker	MODERN SPECIES	478	ENSLCRG00005017757	cav4a (ENSLCRG00005017756)	cav3 (ENSLCRG00005017754)	OXTR (ENSLCRG00005017752)	SRGAP3 (ENSLCRG00005012334)	ptgis (ENSLCRG00005012296)	KCNB1 (ENSLCRG00005012288)	ENSLCRG00005012285	ENSLCRG00005012267	stau1 (ENSLCRG00005012188)	pbrm1l (ENSLCRG00005006349)	CAMK1 (ENSLCRG00005005644)	FAM107A (ENSLCRG00005005631) #18	ENSLCRG00005005628 ##19	cfap20dc (ENSLCRG00005005625) #20	PTPRG (ENSLCRG00005000378) #22	ENSLCRG00005023840	synprb (ENSLCRG00005023839) ##26	ENSLCRG00005023837	ENSLCRG00005023836	slc6a22.2 (ENSLCRG00005023835)	slc6a22.1 (ENSLCRG00005023829)	fkbp5 (ENSLCRG00005023820)	srsf3a (ENSLCRG00005023818)	ENSLCRG00005023817	trub2 (ENSLCRG00005023816)	hdhd3 (ENSLCRG00005023815)	tgfa (ENSLCRG00005023814)	SLC2A11 (ENSLCRG00005023813)	ENSLCRG00005023812	PATZ1 (ENSLCRG00005023811)
Gilthead seabream	MODERN SPECIES	20	rrp9 (ENSSAUG00010000336)	cav4a (ENSSAUG00010000351)	cav3 (ENSSAUG00010000355)	OXTR (ENSSAUG00010000360)	SRGAP3 (ENSSAUG00010000587)	ptgis (ENSSAUG00010003471)	KCNB1 (ENSSAUG00010003485)	ENSSAUG00010003487	ENSSAUG00010003491	stau1 (ENSSAUG00010003501)	pbrm1l (ENSSAUG00010003714)	CAMK1 (ENSSAUG00010012768)	FAM107A (ENSSAUG00010014408) #18	ENSSAUG00010014409 ##19	cfap20dc (ENSSAUG00010014413) #20	PTPRG (ENSSAUG00010014428) #22	ENSSAUG00010014963	synprb (ENSSAUG00010020127) ##26	ENSSAUG00010020129	ENSSAUG00010020148	slc6a22.2 (ENSSAUG00010020171)	slc6a22.1 (ENSSAUG00010021239)	fkbp5 (ENSSAUG00010021302)	srsf3a (ENSSAUG00010021319)	ENSSAUG00010021320	trub2 (ENSSAUG00010021321)	hdhd3 (ENSSAUG00010021323)	tgfa (ENSSAUG00010021324)	SLC2A11 (ENSSAUG00010021332)	ENSSAUG00010021530	PATZ1 (ENSSAUG00010021531)
Perciformes	ANCESTRAL SPECIES		ENSGT00530000069347	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379.h	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177	ENSGT00940000159296
Perciformes_a	ANCESTRAL SPECIES	5	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00940000154899.gb	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379.h	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000159296	ENSGT00390000012071
Pike perch	MODERN SPECIES	73										ENSSLUG00000007798	pbrm1l (ENSSLUG00000007847)	CAMK1 (ENSSLUG00000008510)	FAM107A (ENSSLUG00000010766) #18	ENSSLUG00000010769 ##19	cfap20dc (ENSSLUG00000010785) #20	PTPRG (ENSSLUG00000010937) #22	ENSSLUG00000013930	synprb (ENSSLUG00000014798) ##26	ENSSLUG00000014813	slc6a22.2 (ENSSLUG00000014859)	slc6a22.1 (ENSSLUG00000015066)	fkbp5 (ENSSLUG00000017747)	ENSSLUG00000017802	srsf3a (ENSSLUG00000017804)	ENSSLUG00000017808	trub2 (ENSSLUG00000017813)	hdhd3 (ENSSLUG00000017817)	tgfa (ENSSLUG00000017819)	SLC2A11 (ENSSLUG00000017824)	PATZ1 (ENSSLUG00000017989)	EIF4ENIF1 (ENSSLUG00000018005)
Channel bull blenny	MODERN SPECIES	19	ENSCGOG00000004301	cav4a (ENSCGOG00000004305)	OXTR (ENSCGOG00000004308)	SRGAP3 (ENSCGOG00000004386)	ptgis (ENSCGOG00000006278)	KCNB1 (ENSCGOG00000006337)	ENSCGOG00000006338	ENSCGOG00000006350	stau1 (ENSCGOG00000006396)	pbrm1l (ENSCGOG00000006523)	CAMK1 (ENSCGOG00000007260)	FAM107A (ENSCGOG00000009764) #18	ENSCGOG00000009770 ##19	ENSCGOG00000002623 #20	ENSCGOG00000002649 #20	PTPRG (ENSCGOG00000002828) #22	ENSCGOG00000003906	synprb (ENSCGOG00000008490) ##26	ENSCGOG00000008512	ENSCGOG00000008811	slc6a22.2 (ENSCGOG00000009909)	slc6a22.1 (ENSCGOG00000013045)	fkbp5 (ENSCGOG00000013303)	srsf3a (ENSCGOG00000013827)	ENSCGOG00000013836	trub2 (ENSCGOG00000013841)	hdhd3 (ENSCGOG00000013846)	tgfa (ENSCGOG00000013849)	ENSCGOG00000013857	ENSCGOG00000014004	PATZ1 (ENSCGOG00000014005)
Cottioidei	ANCESTRAL SPECIES		ENSGT00530000069347	ENSGT00950000182998.C.b.b	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00940000178103	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT01030000234637.b.d.a.b ##26	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT00940000166826	ENSGT00940000163827.a.b	ENSGT00940000158726	ENSGT00910000144115.a.hc.a	ENSGT00940000160379.h	ENSGT00940000156773	ENSGT00390000015582	ENSGT00940000160058	ENSGT00940000161061.b	ENSGT00940000166177	ENSGT00940000159296
Stickleback	MODERN SPECIES	281	zmynd10 (ENSGACG00000001280)	RASSF1 (ENSGACG00000001286)	tusc2a (ENSGACG00000001292)	HYAL2 (ENSGACG00000001294)	ENSGACG00000001297	abhd14b (ENSGACG00000001300)	mst1 (ENSGACG00000001303)	C3orf18 (ENSGACG00000001312)	SRGAP3 (ENSGACG00000001317)	ptgis (ENSGACG00000001327)	KCNB1 (ENSGACG00000001336)	ENSGACG00000001346	stau1 (ENSGACG00000001352)	ENSGACG00000001361	CAMK1 (ENSGACG00000001365)	PTPRG (ENSGACG00000001373) #22	ENSGACG00000001382	synprb (ENSGACG00000001392) ##26	ENSGACG00000001398	ENSGACG00000001434	slc6a22.1 (ENSGACG00000001437)	fkbp5 (ENSGACG00000001466)	srsf3a (ENSGACG00000001473)	ENSGACG00000001475	trub2 (ENSGACG00000001476)	hdhd3 (ENSGACG00000001477)	ENSGACG00000001478	ENSGACG00000001480	PATZ1 (ENSGACG00000001483)	ENSGACG00000001485	EIF4ENIF1 (ENSGACG00000001486)
Lumpfish	MODERN SPECIES	20	ENSCLMG00005018607	cav4a (ENSCLMG00005018606)	OXTR (ENSCLMG00005018605)	SRGAP3 (ENSCLMG00005018577)	ptgis (ENSCLMG00005018568)	KCNB1 (ENSCLMG00005018567)	ENSCLMG00005018563	ENSCLMG00005018561	ENSCLMG00005018559	stau1 (ENSCLMG00005018555)	pbrm1l (ENSCLMG00005018411)	CAMK1 (ENSCLMG00005018396)	ENSCLMG00005018395 #18	ENSCLMG00005018394 ##19	ENSCLMG00005018393	PTPRG (ENSCLMG00005017865) #22	ENSCLMG00005017692	synprb (ENSCLMG00005017658) ##26	ENSCLMG00005017605	ENSCLMG00005017597	ENSCLMG00005017578	slc6a22.2 (ENSCLMG00005017409)	slc6a22.1 (ENSCLMG00005014566)	fkbp5 (ENSCLMG00005014532)	srsf3a (ENSCLMG00005014530)	ENSCLMG00005014529	trub2 (ENSCLMG00005014524)	hdhd3 (ENSCLMG00005014522)	tgfa (ENSCLMG00005014520)	ENSCLMG00005014214	ENSCLMG00005014211
Cod	MODERN SPECIES	4	TEX264 (ENSGMOG00000016196)	grm2b (ENSGMOG00000016184)	rrp9 (ENSGMOG00000016148)	ENSGMOG00000025182	cav4a (ENSGMOG00000030221)	ENSGMOG00000031309	ENSGMOG00000016745	ptgis (ENSGMOG00000016802)	ENSGMOG00000028035	ENSGMOG00000016833	stau1 (ENSGMOG00000016850)	pbrm1l (ENSGMOG00000016872)	ENSGMOG00000016883	ENSGMOG00000016897 ##19	ENSGMOG00000017097 #20	PTPRG (ENSGMOG00000017157) #22	ENSGMOG00000017240	ENSGMOG00000017300 ##26	ENSGMOG00000017343	ENSGMOG00000017321	ENSGMOG00000031019	ENSGMOG00000027015	ninj1 (ENSGMOG00000017428)	card19 (ENSGMOG00000017439)	ENSGMOG00000028357	ENSGMOG00000023920	cacna1da (ENSGMOG00000017493)	parapinopsinb (ENSGMOG00000017584)	ENSGMOG00000017604	ENSGMOG00000017664	tmcc1b (ENSGMOG00000017680)
Protacanthopterygii	ANCESTRAL SPECIES	3	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a.k.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a.k.a	ENSGT01030000234637.b.d.a.b ##26	ENSGT00950000183006.A.a.a.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000182824.a.b.a.j.b	ENSGT00940000153709.A.f	ENSGT00940000154899.fb.b	ENSGT00390000008325.b.a	ENSGT00940000165342.a	ENSGT00940000157304	ENSGT00390000003017.c.b.b	ENSGT00940000156378.a.b.c.b	ENSGT00940000155048.d.b #22	ENSGT00590000083094.a.a.c.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000154557	ENSGT00940000159688	ENSGT00940000157007.i.b	ENSGT00940000158177.a	ENSGT00940000160163	ENSGT00950000183124.C	ENSGT01100000263505.b.b.a.a.a.a.b.a.b.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1524																ENSGT00940000155048.d.b.e #22	ENSGT00590000083094.a.a.c.b.c.b
Huchen	MODERN SPECIES	1040																PTPRG (ENSHHUG00000044053) #22	ENSHHUG00000044301
Salmoninae_a	ANCESTRAL SPECIES	15	ENSGT01030000234549.a.a.a.a.a.b.a.c.a.l	ENSGT01030000234549.a.a.a.a.a.b.a.c.a.k.a.a.a	ENSGT01030000234637.b.d.a.b.b ##26	ENSGT00950000183006.A.a.a.b.f	ENSGT00950000183006.B.f.b.b.cb.a	ENSGT01050000244882.a.a.b.a.a.b	ENSGT00950000182824.a.b.a.j.b.b	ENSGT00940000153709.A.f.e	ENSGT00940000154899.fb.b.c	ENSGT00390000008325.b.a.c	ENSGT00940000157304.m	ENSGT00390000003017.c.b.b.e	ENSGT00940000156378.a.b.d	ENSGT01020000230338.a.b.b.a.b.a.a.a.a.a.a.a.a.b	ENSGT00990000211485.a.a	ENSGT00940000155048.d.b.e #22	ENSGT00590000083094.a.a.c.b.c.b	ENSGT00950000182998.C.b.b.c	ENSGT00940000158328.g	ENSGT01030000234595.B.c.a.d.a	ENSGT00390000016901.a	ENSGT00940000159688.g	ENSGT00940000157007.i.b.e	ENSGT00940000160163.h	ENSGT00950000183124.C	ENSGT01100000263505.b.b.a.b.a.a.a.b.b.b.b.a	ENSGT01100000263505.b.b.a.a.a.a.b.a.b.b	ENSGT00920000149095.e	ENSGT00940000162989.f.a.a.d	ENSGT00940000162989.e.a	ENSGT00940000164703.a.f
Salmo	ANCESTRAL SPECIES	42	ENSGT01030000234549.a.a.a.a.a.b.a.c.a.k.a.a.a	ENSGT01030000234637.b.d.a.b.b ##26	ENSGT00950000183006.A.a.a.b.f	ENSGT00950000183006.B.f.b.b.cb.a	ENSGT01050000244882.a.a.b.a.a.b	ENSGT00950000182824.a.b.a.j.b.b	ENSGT00940000153709.A.f.e	ENSGT00940000154899.fb.b.c	ENSGT00390000008325.b.a.c	ENSGT00940000157304.m	ENSGT00390000003017.c.b.b.e	ENSGT00940000156378.a.b.c.b	ENSGT00990000212577	ENSGT01020000230338.a.b.b.a.b.a.a.a.a.a.a.a.a.b	ENSGT00990000211485.a.a	ENSGT00940000155048.d.b.e #22	ENSGT00590000083094.a.a.c.b.c.b	ENSGT00950000182998.C.b.b.c	ENSGT00940000158328.g	ENSGT01030000234595.B.c.a.d.a	ENSGT00390000016901.a	ENSGT00940000159688.g	ENSGT00940000157007.i.b.e	ENSGT00940000160163.h	ENSGT00950000183124.C	ENSGT01100000263505.b.b.a.b.a.a.a.b.b.b.b.a	ENSGT01100000263505.b.b.a.a.a.a.b.a.b.b	ENSGT00920000149095.e	ENSGT00940000162989.f.a.a.d	ENSGT00940000162989.e.a	ENSGT00940000164703.a.f
Atlantic salmon	MODERN SPECIES	14	ENSSSAG00000110368	ENSSSAG00000088508	ENSSSAG00000093435	synprb (ENSSSAG00000083113) ##26	CAV3 (ENSSSAG00000071903)	ENSSSAG00000122213	SRGAP3 (ENSSSAG00000055833)	ptgis (ENSSSAG00000064171)	ENSSSAG00000064298	ENSSSAG00000064305	stau1 (ENSSSAG00000064428)	pbrm1l (ENSSSAG00000065235)	ENSSSAG00000073372	ENSSSAG00000112938	ENSSSAG00000075480	ENSSSAG00000075534 #22	ENSSSAG00000098557	ENSSSAG00000076633	ENSSSAG00000079472	RRP9 (ENSSSAG00000079477)	grm2b (ENSSSAG00000079496)	TEX264 (ENSSSAG00000114786)	slc6a14 (ENSSSAG00000079731)	fmoda (ENSSSAG00000079853)	ENSSSAG00000118858	ENSSSAG00000062816	il19l (ENSSSAG00000079859)	ENSSSAG00000096924	ENSSSAG00000079860	ENSSSAG00000079863	ENSSSAG00000079879
River trout	MODERN SPECIES	7	ENSSTUG00000042937	ENSSTUG00000042555	synprb (ENSSTUG00000042351) ##26	ENSSTUG00000042325	cav3 (ENSSTUG00000042300)	OXTR (ENSSTUG00000042286)	SRGAP3 (ENSSTUG00000039778)	ptgis (ENSSTUG00000039563)	KCNB1 (ENSSTUG00000039548)	stau1 (ENSSTUG00000038881)	pbrm1l (ENSSTUG00000029132)	CAMK1 (ENSSTUG00000028454)	ENSSTUG00000028427	ENSSTUG00000028365	ENSSTUG00000028354	PTPRG (ENSSTUG00000026560) #22	ENSSTUG00000019260	ENSSTUG00000019038	rrp9 (ENSSTUG00000018932)	grm2b (ENSSTUG00000018911)	TEX264 (ENSSTUG00000018895)	slc6a14 (ENSSTUG00000018397)	fmoda (ENSSTUG00000018368)	PRELP (ENSSTUG00000018356)	il19l (ENSSTUG00000018348)	ENSSTUG00000018344	ENSSTUG00000018339	ENSSTUG00000018335	ENSSTUG00000018325	ENSSTUG00000018189	ENSSTUG00000018146
Oncorhynchus	ANCESTRAL SPECIES	5	ENSGT01030000234549.a.a.a.a.a.b.a.c.a.k.b.a.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a.k.b.a.a	ENSGT01030000234637.b.d.a.b.b ##26	ENSGT00950000183006.A.a.a.b.f	ENSGT00950000183006.B.f.b.b.cb.a	ENSGT01050000244882.a.a.b.a.a.b	ENSGT00950000182824.a.b.a.j.b.b	ENSGT00940000153709.A.f.e	ENSGT00940000154899.fb.b.c	ENSGT00390000008325.b.a.c	ENSGT00940000157304.m	ENSGT00390000003017.c.b.b.e	ENSGT00940000156378.a.b.d	ENSGT01020000230338.a.b.b.a.b.a.a.a.a.a.a.a.a.b.b	ENSGT00990000211485.a.a	ENSGT00940000155048.d.b.e #22	ENSGT00590000083094.a.a.c.b.c.b	ENSGT00950000182998.C.b.b.c	ENSGT00940000158328.g	ENSGT01030000234595.B.c.a.d.a	ENSGT00390000016901.a	ENSGT00940000159688.g	ENSGT00940000157007.i.b.e	ENSGT00940000160163.h	ENSGT00950000183124.C	ENSGT01100000263505.b.b.a.a.a.a.b.a.b.b	ENSGT00940000162989.f.a.a.d	ENSGT00940000162989.e.a	ENSGT00940000164703.a.f	ENSGT00940000157024.k.a.c	ENSGT00940000158263.j
Rainbow trout	MODERN SPECIES	28	synprb (ENSOMYG00000010550) ##26	ENSOMYG00000010564	CAV3 (ENSOMYG00000029688)	ENSOMYG00000029701	ENSOMYG00000073533	SRGAP3 (ENSOMYG00000030878)	ENSOMYG00000051904	ptgis (ENSOMYG00000036530)	ENSOMYG00000036544	ENSOMYG00000036561	ENSOMYG00000055564	stau1 (ENSOMYG00000062808)	pbrm1l (ENSOMYG00000036827)	ENSOMYG00000059623	ENSOMYG00000037384	ENSOMYG00000037513 #22	ENSOMYG00000072681	ENSOMYG00000038094	ENSOMYG00000039713	RRP9 (ENSOMYG00000039777)	grm2b (ENSOMYG00000039835)	TEX264 (ENSOMYG00000039874)	ENSOMYG00000050903	slc6a14 (ENSOMYG00000039934)	fmoda (ENSOMYG00000040153)	ENSOMYG00000040165	il19l (ENSOMYG00000040178)	ENSOMYG00000040185	ENSOMYG00000040196	ENSOMYG00000040248	ENSOMYG00000040330
Oncorhynchus_a	ANCESTRAL SPECIES	4	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a.k.b.a.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a.k.b.a.a	ENSGT01030000234637.b.d.a.b.b ##26	ENSGT00950000183006.A.a.a.b.f	ENSGT00950000183006.B.f.b.b.cb.a	ENSGT01050000244882.a.a.b.a.a.b	ENSGT00950000182824.a.b.a.j.b.b	ENSGT00940000153709.A.f.e	ENSGT00940000154899.fb.b.c	ENSGT00390000008325.b.a.c	ENSGT00940000157304.m	ENSGT00390000003017.c.b.b.e	ENSGT00940000156378.a.b.d	ENSGT01020000230338.a.b.b.a.b.a.a.a.a.a.a.a.a.b.b	ENSGT00940000155048.d.b.e #22	ENSGT00590000083094.a.a.c.b.c.b	ENSGT00950000182998.C.b.b.c	ENSGT00940000158328.g	ENSGT01030000234595.B.c.a.d.a	ENSGT00390000016901.a	ENSGT00940000159688.g	ENSGT00940000157007.i.b.e	ENSGT00940000160163.h	ENSGT00950000183124.C	ENSGT01100000263505.b.b.a.a.a.a.b.a.b.b	ENSGT00940000162989.f.a.a.d	ENSGT00940000162989.e.a	ENSGT00940000164703.a.f	ENSGT00940000157024.k.a.c	ENSGT00940000158263.j
Coho salmon	MODERN SPECIES	25	slc6a22.1 (ENSOKIG00005001261)	slc6a22.2 (ENSOKIG00005001326)	opn1mw1 (ENSOKIG00005001493)	synprb (ENSOKIG00005001513) ##26	cav4a (ENSOKIG00005001516)	CAV3 (ENSOKIG00005001520)	OXTR (ENSOKIG00005001525)	SRGAP3 (ENSOKIG00005001629)	ptgis (ENSOKIG00005002348)	KCNB1 (ENSOKIG00005002383)	ENSOKIG00005002396	stau1 (ENSOKIG00005002424)	pbrm1l (ENSOKIG00005002602)	CAMK1 (ENSOKIG00005003084)	ENSOKIG00005003182	PTPRG (ENSOKIG00005003249) #22	ENSOKIG00005003636	ENSOKIG00005005075	RRP9 (ENSOKIG00005005104)	grm2b (ENSOKIG00005005239)	TEX264 (ENSOKIG00005005465)	ENSOKIG00005005470	slc6a14 (ENSOKIG00005005514)	fmoda (ENSOKIG00005005963)	PRELP (ENSOKIG00005005970)	il19l (ENSOKIG00005005975)	ENSOKIG00005005986	ENSOKIG00005006000	ENSOKIG00005006078	cntn2 (ENSOKIG00005006170)	nfasca (ENSOKIG00005006614)
Chinook salmon	MODERN SPECIES	31	slc6a22.1 (ENSOTSG00005025680)	slc6a22.2 (ENSOTSG00005025685)	ENSOTSG00005025689	ENSOTSG00005025694	synprb (ENSOTSG00005025699) ##26	cav4a (ENSOTSG00005025701)	cav3 (ENSOTSG00005025702)	OXTR (ENSOTSG00005025703)	ENSOTSG00005025704	SRGAP3 (ENSOTSG00005025722)	ptgis (ENSOTSG00005026781)	KCNB1 (ENSOTSG00005026884)	stau1 (ENSOTSG00005026885)	pbrm1l (ENSOTSG00005027078)	ENSOTSG00005027759	PTPRG (ENSOTSG00005027775) #22	ENSOTSG00005028099	ENSOTSG00005033010	rrp9 (ENSOTSG00005033012)	grm2b (ENSOTSG00005033031)	TEX264 (ENSOTSG00005033278)	slc6a14 (ENSOTSG00005033281)	fmoda (ENSOTSG00005033334)	PRELP (ENSOTSG00005033336)	il19l (ENSOTSG00005033337)	ENSOTSG00005033338	ENSOTSG00005030028	ENSOTSG00005030040	cntn2 (ENSOTSG00005030041)	nfasca (ENSOTSG00005030059)	PIK3C2B (ENSOTSG00005031955)
Salmoninae	ANCESTRAL SPECIES	150	ENSGT01030000234637.b.d.a.b.a ##26	ENSGT00950000183006.A.a.a.b.e	ENSGT00950000183006.B.f.b.b.cb.b	ENSGT01050000244882.a.a.b.a.a.a	ENSGT00950000182824.a.b.a.j.b.a	ENSGT00940000153709.A.f.f	ENSGT00940000154899.fb.b.d	ENSGT00390000008325.b.a.d	ENSGT00940000165342.a	ENSGT00940000157304.n	ENSGT00390000003017.c.b.b.f	ENSGT00940000156378.a.b.c.a	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b.f #22	ENSGT00590000083094.a.a.c.b.c.a	ENSGT00950000182998.C.b.b.d	ENSGT00940000158328.h	ENSGT01030000234595.B.c.a.d.b	ENSGT00940000160163.g	ENSGT00940000158177.a	ENSGT00940000157007.i.b.f	ENSGT00940000159688.h	ENSGT00940000154557
Salmoninae_a	ANCESTRAL SPECIES	21	ENSGT01030000234637.b.d.a.b.a ##26	ENSGT00950000183006.A.a.a.b.e	ENSGT00950000183006.B.f.b.b.cb.b	ENSGT01050000244882.a.a.b.a.a.a	ENSGT00950000182824.a.b.a.j.b.a	ENSGT00940000153709.A.f.f	ENSGT00940000154899.fb.b.d	ENSGT00390000008325.b.a.d	ENSGT00940000165342.a	ENSGT00940000157304.n	ENSGT00390000003017.c.b.b.f	ENSGT00940000156378.a.b.c.a	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b.f #22	ENSGT00590000083094.a.a.c.b.c.a	ENSGT00940000154348.c.b.b.b.ab.c.a	ENSGT00950000182998.C.b.b.d	ENSGT00940000158328.h	ENSGT01030000234595.B.c.a.d.b	ENSGT00940000160163.g	ENSGT00940000158177.a	ENSGT00940000157007.i.b.f	ENSGT00940000159688.h	ENSGT00940000154557.u.b	ENSGT00940000154557.u.a	ENSGT00940000164807.F.d	ENSGT00920000149095.f	ENSGT00940000162989.f.a.a.c	ENSGT00940000162989.e.b
Salmo	ANCESTRAL SPECIES	6	ENSGT01030000234637.b.d.a.b.a ##26	ENSGT00950000183006.A.a.a.b.e	ENSGT00950000183006.B.f.b.b.cb.b	ENSGT01050000244882.a.a.b.a.a.a	ENSGT00950000182824.a.b.a.j.b.a	ENSGT00940000153709.A.f.f	ENSGT00940000154899.fb.b.d	ENSGT00390000008325.b.a.d	ENSGT00940000165342.a	ENSGT00940000157304.n	ENSGT00390000003017.c.b.b.f	ENSGT00940000156378.a.b.c.a	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b.f #22	ENSGT00590000083094.a.a.c.b.c.a	ENSGT00940000154348.c.b.b.b.ab.c.a	ENSGT00950000182998.C.b.b.d	ENSGT00940000158328.h	ENSGT01030000234595.B.c.a.d.b	ENSGT00940000160163.g	ENSGT00940000158177.a	ENSGT00940000157007.i.b.f	ENSGT00940000159688.h	ENSGT00940000154557.u.b	ENSGT00940000154557.u.a	ENSGT00940000157046.D.d.e.a	ENSGT00940000164807.F.d	ENSGT00920000149095.f	ENSGT00940000162989.f.a.a.c
River trout	MODERN SPECIES	5	synprb (ENSSTUG00000009910) ##26	cav4a (ENSSTUG00000009920)	cav3 (ENSSTUG00000009927)	OXTR (ENSSTUG00000009937)	SRGAP3 (ENSSTUG00000010018)	ptgis (ENSSTUG00000013216)	KCNB1 (ENSSTUG00000013280)	ENSSTUG00000013285	ENSSTUG00000013294	stau1 (ENSSTUG00000013380)	pbrm1l (ENSSTUG00000013610)	CAMK1 (ENSSTUG00000014901)	FAM107A (ENSSTUG00000017282) #18	ENSSTUG00000017298 ##19	cfap20dc (ENSSTUG00000017322) #20	PTPRG (ENSSTUG00000017417) #22	ENSSTUG00000018511	ENSSTUG00000026902	ENSSTUG00000026906	rrp9 (ENSSTUG00000026909)	grm2b (ENSSTUG00000028947)	ENSSTUG00000029549	PRELP (ENSSTUG00000029554)	zgc:113307 (ENSSTUG00000029568)	fmoda (ENSSTUG00000029577)	slc6a14 (ENSSTUG00000029602)	ENSSTUG00000030504	ENSSTUG00000030572	ENSSTUG00000030633	ENSSTUG00000030635	zc3h11a (ENSSTUG00000030643)
Atlantic salmon	MODERN SPECIES	3	CAV3 (ENSSSAG00000079720)	ENSSSAG00000079716	SRGAP3 (ENSSSAG00000078803)	ptgis (ENSSSAG00000078664)	ENSSSAG00000078660	ENSSSAG00000111593	ENSSSAG00000078636	stau1 (ENSSSAG00000078617)	pbrm1l (ENSSSAG00000074858)	ENSSSAG00000085678	ENSSSAG00000074323	FAM107A (ENSSSAG00000085133) #18	ENSSSAG00000074292 ##19	cssa12h3orf67 (ENSSSAG00000074283) #20	ENSSSAG00000109258	PTPRG (ENSSSAG00000072096) #22	ENSSSAG00000063275	ENSSSAG00000092808	ENSSSAG00000062968	grm2b (ENSSSAG00000062842)	ENSSSAG00000079856	zgc:113307 (ENSSSAG00000101752)	fmoda (ENSSSAG00000116691)	slc6a14 (ENSSSAG00000060126)	ENSSSAG00000056368	ENSSSAG00000101314	ENSSSAG00000104270	ENSSSAG00000056283	ENSSSAG00000094111	zc3h11a (ENSSSAG00000056261)	ENSSSAG00000054620
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT01030000234637.b.d.a.b.a ##26	ENSGT00950000183006.A.a.a.b.e	ENSGT00950000183006.B.f.b.b.cb.b	ENSGT01050000244882.a.a.b.a.a.a	ENSGT00950000182824.a.b.a.j.b.a	ENSGT00940000153709.A.f.f	ENSGT00940000154899.fb.b.d	ENSGT00390000008325.b.a.d	ENSGT00940000165342.a	ENSGT00940000157304.n	ENSGT00390000003017.c.b.b.f	ENSGT00940000156378.a.b.c.a	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b.f #22	ENSGT00590000083094.a.a.c.b.c.a	ENSGT00940000154348.c.b.b.b.ab.c.a	ENSGT00950000182998.C.b.b.d	ENSGT00940000158328.h	ENSGT01030000234595.B.c.a.d.b	ENSGT00940000160163.g	ENSGT00940000158177.a	ENSGT00940000157007.i.b.f	ENSGT00940000159688.h	ENSGT00940000154557.u.b	ENSGT00940000154557.u.a	ENSGT00940000161979.A.a.a.a.a	ENSGT00940000164807.F.d	ENSGT00920000149095.f	ENSGT00940000162989.f.a.a.c
Oncorhynchus_a	DUPLICATION
Oncorhynchus_a	ANCESTRAL SPECIES	3	ENSGT00950000183006.B.f.b.b.cb.b	ENSGT01050000244882.a.a.b.a.a.a	ENSGT00950000182824.a.b.a.j.b.a	ENSGT00940000153709.A.f.f	ENSGT00940000154899.fb.b.d	ENSGT00390000008325.b.a.d	ENSGT00940000165342.a	ENSGT00940000157304.n	ENSGT00390000003017.c.b.b.f	ENSGT00940000156378.a.b.c.b	ENSGT00940000156378.a.b.c.a	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b.f.b #22	ENSGT00940000155048.d.b.f.a #22	ENSGT00590000083094.a.a.c.b.c.a	ENSGT00940000154348.c.b.b.b.ab.c.a	ENSGT00950000182998.C.b.b.d	ENSGT00940000158328.h	ENSGT01030000234595.B.c.a.d.b	ENSGT00940000160163.g	ENSGT00940000158177.a	ENSGT00940000157007.i.b.f	ENSGT00940000159688.h	ENSGT00940000154557.u.b	ENSGT00940000161979.A.a.a.a.a	ENSGT00940000164807.F.d	ENSGT00920000149095.f	ENSGT00940000162989.f.a.a.c	ENSGT00940000162989.e.b
Coho salmon	MODERN SPECIES		ENSOKIG00005027099	CAV3 (ENSOKIG00005027114)	OXTR (ENSOKIG00005027133)	SRGAP3 (ENSOKIG00005027313)	ptgis (ENSOKIG00005029090)	KCNB1 (ENSOKIG00005029149)	ENSOKIG00005029156	ENSOKIG00005029163	stau1 (ENSOKIG00005029219)	pbrm1l (ENSOKIG00005029406)	CAMK1 (ENSOKIG00005031322)	FAM107A (ENSOKIG00005031599) #18	ENSOKIG00005031631 ##19	cfap20dc (ENSOKIG00005031648) #20	ENSOKIG00005031678	PTPRG (ENSOKIG00005031759) #22	ENSOKIG00005032535	ENSOKIG00005036195	rrp9 (ENSOKIG00005036200)	grm2b (ENSOKIG00005036240)	PRELP (ENSOKIG00005036606)	zgc:113307 (ENSOKIG00005036628)	fmoda (ENSOKIG00005036646)	slc6a14 (ENSOKIG00005036666)	ENSOKIG00005036819	ENSOKIG00005037084	ENSOKIG00005037867	ENSOKIG00005037881	ENSOKIG00005037896	ENSOKIG00005037907	ENSOKIG00005037935
Chinook salmon	MODERN SPECIES	2892																PTPRG (ENSOTSG00005028637) #22	ENSOTSG00005021646	ENSOTSG00005041068	ENSOTSG00005041066	rrp9 (ENSOTSG00005041064)	grm2b (ENSOTSG00005041062)	PRELP (ENSOTSG00005041060)	zgc:113307 (ENSOTSG00005041059)	fmoda (ENSOTSG00005041057)	ENSOTSG00005040856	ENSOTSG00005040848	ENSOTSG00005040846	ENSOTSG00005040845	zc3h11a (ENSOTSG00005040843)	ENSOTSG00005040842	ENSOTSG00005040840
Oncorhynchus_a	ANCESTRAL SPECIES	3	ENSGT00950000183006.A.a.a.b.e	ENSGT00950000183006.B.f.b.b.cb.b	ENSGT01050000244882.a.a.b.a.a.a	ENSGT00950000182824.a.b.a.j.b.a	ENSGT00940000153709.A.f.f	ENSGT00940000154899.fb.b.d	ENSGT00390000008325.b.a.d	ENSGT00940000165342.a	ENSGT00940000157304.n	ENSGT00390000003017.c.b.b.f	ENSGT00940000156378.a.b.c.b	ENSGT00940000156378.a.b.c.a	ENSGT00390000011228.b.a.e.b #18	ENSGT00950000183004.a.a.b ##19	ENSGT00390000005497 #20	ENSGT00940000155048.d.b.f.b #22	ENSGT00940000155048.d.b.f.a #22	ENSGT00590000083094.a.a.c.b.c.a	ENSGT00940000154348.c.b.b.b.ab.c.a	ENSGT00950000182998.C.b.b.d	ENSGT00940000158328.h	ENSGT01030000234595.B.c.a.d.b	ENSGT00940000160163.g	ENSGT00940000158177.a	ENSGT00940000157007.i.b.f	ENSGT00940000159688.h	ENSGT00940000154557.u.b	ENSGT00940000161979.A.a.a.a.a	ENSGT00940000164807.F.d	ENSGT00920000149095.f	ENSGT00940000162989.f.a.a.c
Chinook salmon	MODERN SPECIES	11	synprb (ENSOTSG00005000160) ##26	cav4a (ENSOTSG00005000157)	cav3 (ENSOTSG00005000154)	OXTR (ENSOTSG00005000151)	SRGAP3 (ENSOTSG00005000111)	ptgis (ENSOTSG00005018912)	KCNB1 (ENSOTSG00005018902)	ENSOTSG00005018899	stau1 (ENSOTSG00005018838)	pbrm1l (ENSOTSG00005016071)	ENSOTSG00005016040	CAMK1 (ENSOTSG00005016039)	FAM107A (ENSOTSG00005016038) #18	ENSOTSG00005016035 ##19	cfap20dc (ENSOTSG00005016033) #20	ENSOTSG00005016030 #22	tshz3b (ENSOTSG00005016027)	ZNF507 (ENSOTSG00005016026)	DPY19L3 (ENSOTSG00005016014)	BSN (ENSOTSG00005016011)	bap1 (ENSOTSG00005015287)	RAD54L2 (ENSOTSG00005013990)	cyb561d2 (ENSOTSG00005013985)	rassf1 (ENSOTSG00005013984)	tusc2b (ENSOTSG00005013983)	HYAL2 (ENSOTSG00005013982)	ENSOTSG00005013981	ACY1 (ENSOTSG00005013881)	CACNA2D2 (ENSOTSG00005013534)	ENSOTSG00005013529	aqp7 (ENSOTSG00005013528)
Rainbow trout	MODERN SPECIES	8	ENSOMYG00000045971	SRGAP3 (ENSOMYG00000045918)	ptgis (ENSOMYG00000045898)	ENSOMYG00000045896	ENSOMYG00000045894	ENSOMYG00000045888	stau1 (ENSOMYG00000065880)	ENSOMYG00000074200	pbrm1l (ENSOMYG00000045685)	ENSOMYG00000045614	FAM107A (ENSOMYG00000064739) #18	ENSOMYG00000045608 ##19	cfap20dc (ENSOMYG00000045582) #20	ENSOMYG00000054794	ENSOMYG00000068265	PTPRG (ENSOMYG00000044803) #22	ENSOMYG00000040871	ENSOMYG00000060719	ENSOMYG00000040259	grm2b (ENSOMYG00000040212)	ENSOMYG00000040164	ENSOMYG00000067022	ENSOMYG00000040150	fmoda (ENSOMYG00000040136)	ENSOMYG00000040052	ENSOMYG00000077458	ENSOMYG00000039975	ENSOMYG00000039946	ENSOMYG00000064110	ENSOMYG00000039939	ENSOMYG00000039341
Huchen	MODERN SPECIES	173														ENSHHUG00000030921 ##19	cfap20dc (ENSHHUG00000030934) #20	PTPRG (ENSHHUG00000030973) #22	ENSHHUG00000031301	rrp9 (ENSHHUG00000032495)	grm2b (ENSHHUG00000032515)	PRELP (ENSHHUG00000032550)	zgc:113307 (ENSHHUG00000032556)	fmoda (ENSHHUG00000032562)	slc6a14 (ENSHHUG00000032570)	ENSHHUG00000032588
Northern pike	MODERN SPECIES	16	slc6a22.1 (ENSELUG00000002406)	slc6a22.2 (ENSELUG00000002414)	synprb (ENSELUG00000002418) ##26	cav4a (ENSELUG00000002429)	cav3 (ENSELUG00000002434)	OXTR (ENSELUG00000002439)	SRGAP3 (ENSELUG00000002479)	ptgis (ENSELUG00000002501)	KCNB1 (ENSELUG00000002510)	stau1 (ENSELUG00000002529)	pbrm1l (ENSELUG00000002542)	CAMK1 (ENSELUG00000002551)	ENSELUG00000002556 #18	ENSELUG00000000064 ##19	cfap20dc (ENSELUG00000002576) #20	PTPRG (ENSELUG00000002597) #22	ENSELUG00000002696	ENSELUG00000028111	rrp9 (ENSELUG00000002740)	grm2b (ENSELUG00000002750)	TEX264 (ENSELUG00000002762)	ENSELUG00000031903	ENSELUG00000002849	ENSELUG00000002922	slc6a14 (ENSELUG00000002932)	slc6a14 (ENSELUG00000002949)	fmoda (ENSELUG00000002963)	zgc:113307 (ENSELUG00000002973)	PRELP (ENSELUG00000002992)	il19l (ENSELUG00000003002)	ENSELUG00000001200
Elephant shark	MODERN SPECIES	1523									kctd6a (ENSCMIG00000004512) #15	ACOX2 (ENSCMIG00000004575) #16	FAM107A (ENSCMIG00000004706) #18	ENSCMIG00000004720 ##19	ENSCMIG00000004752 #20	CFAP20DC (ENSCMIG00000004756) #20	FHIT (ENSCMIG00000004767) #21	ptprga (ENSCMIG00000004939) #22	ENSCMIG00000005665 #23	fezf2 (ENSCMIG00000005676) #24	ENSCMIG00000005879	nampt2 (ENSCMIG00000006309)	synprb (ENSCMIG00000006509) #26	ENSCMIG00000006510	thoc7 (ENSCMIG00000006513) #29	ATXN7 (ENSCMIG00000006518) #30	psmd6 (ENSCMIG00000006524) #31	prickle2b (ENSCMIG00000006543) #32	ADAMTS9 (ENSCMIG00000006593) #33	magi1b (ENSCMIG00000006716) #34	slc25a26 (ENSCMIG00000006796) #35	LRIG1 (ENSCMIG00000006843) #36	kbtbd8 (ENSCMIG00000006920) #37
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000155048 #22
Lamprey	MODERN SPECIES	4317																ptprga (ENSPMAG00000007521) #22
Hagfish	MODERN SPECIES	1437											ENSEBUG00000000973	ENSEBUG00000008096	ENSEBUG00000005542	porcn (ENSEBUG00000005397)	ENSEBUG00000014094	ENSEBUG00000013112 #22	ENSEBUG00000002297	usp49 (ENSEBUG00000014527)	ENSEBUG00000010950	ENSEBUG00000016699 #13	ENSEBUG00000013404