Gnathostomata	ANCESTRAL SPECIES	136						ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000160269	ENSGT00940000154200.B
Euteleostomi	ANCESTRAL SPECIES	7	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000160889	ENSGT00940000154035.a	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000154674	ENSGT00910000144305	ENSGT00940000153981.B	ENSGT00390000015458	ENSGT00940000155866	ENSGT01030000234590.A.b.a.b.b
Sarcopterygii	ANCESTRAL SPECIES	5	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000154035.a	ENSGT00940000165258	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000154674	ENSGT00910000144305	ENSGT00940000153981.B	ENSGT00390000015458	ENSGT00940000155866	ENSGT01030000234590.A.b.a.b.b
Tetrapoda	ANCESTRAL SPECIES	12	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000154035.a	ENSGT00940000165258	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458	ENSGT00940000155866
Amniota	ANCESTRAL SPECIES	13	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00910000147942	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458	ENSGT00940000155866
Mammalia	ANCESTRAL SPECIES	7	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00910000147942	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458	ENSGT00940000155866
Theria	ANCESTRAL SPECIES	5	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00910000147942	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458
Eutheria	ANCESTRAL SPECIES	5	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00910000147942	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00910000147942	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Glires	ANCESTRAL SPECIES	2	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Rodentia	ANCESTRAL SPECIES	2	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000164931	ENSGT00940000154435.k	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Myomorpha	ANCESTRAL SPECIES	58	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269
Muroidea	ANCESTRAL SPECIES	71	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k.b	ENSGT00940000154435.k.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT00940000157737	ENSGT00940000159819	ENSGT00950000182965.a.b.b.b.h	ENSGT00940000160227
Murinae	ANCESTRAL SPECIES	3	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00960000192143 #17	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k.b	ENSGT00940000154435.k.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT00940000157737	ENSGT00940000159819	ENSGT00950000182965.a.b.b.b.h	ENSGT00940000160227
Mus	ANCESTRAL SPECIES	4	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00960000192143 #17	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k.b	ENSGT00940000154435.k.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT00940000157737	ENSGT00940000159819	ENSGT00950000182965.a.b.b.b.h	ENSGT00940000160227
Mus_A	ANCESTRAL SPECIES	4	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00960000192143 #17	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k.b	ENSGT00940000154435.k.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT00940000157737	ENSGT00940000159819	ENSGT00950000182965.a.b.b.b.h	ENSGT00940000160227
Mus_B	ANCESTRAL SPECIES	3	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481.q.b ##11	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00960000192143 #17	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k.b	ENSGT00940000154435.k.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT00940000157737	ENSGT00940000159819	ENSGT00950000182965.a.b.b.b.h	ENSGT00940000160227
Mus_C	ANCESTRAL SPECIES	23	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.q.b ##11	ENSGT00530000068221 #10	ENSGT00940000155481.r #11	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00960000192143 #17	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k.a	ENSGT00940000161728
Steppe mouse	MODERN SPECIES	3378	ENSMSIG00000015558 #7	Zbtb38 (ENSMSIG00000015564) #8	Rasa2 (ENSMSIG00000015576) #9	Gm28729 (ENSMSIG00000015659) #10	ENSMSIG00000015688 #11	Atp1b3 (ENSMSIG00000015722) #12	Tfdp2 (ENSMSIG00000015771) #13	ENSMSIG00000015907 #14	Xrn1 (ENSMSIG00000016035) #15	Atr (ENSMSIG00000016256) #16	ENSMSIG00000016478 #17	Pls1 (ENSMSIG00000016487) #18	Trpc1 (ENSMSIG00000016555) #19	ENSMSIG00000016620 #20	ENSMSIG00000016681 #21	U2surp (ENSMSIG00000016694) #22	Chst2 (ENSMSIG00000016958) #23	Slc9a9 (ENSMSIG00000016991) #24	ENSMSIG00000017003 #25	ENSMSIG00000017017 #26	ENSMSIG00000017021 #27	ENSMSIG00000017056 #28	ENSMSIG00000017062 #29	ENSMSIG00000017067 #30	ENSMSIG00000017093 #31	ENSMSIG00000017099 #32	ENSMSIG00000017118 #33	ENSMSIG00000017124 #34	ENSMSIG00000017134 #35	Plod2 (ENSMSIG00000017143) #36	Plscr4 (ENSMSIG00000017224) #37
spretus	MODERN SPECIES	18	Slc25a36 (MGP_SPRETEiJ_G0033687)	Spsb4 (MGP_SPRETEiJ_G0033686)	Pxylp1 (MGP_SPRETEiJ_G0033685)	Zbtb38 (MGP_SPRETEiJ_G0033684) #8	Rasa2 (MGP_SPRETEiJ_G0033683) #9	Rnf7 (MGP_SPRETEiJ_G0033682) ##11	Atp1b3 (MGP_SPRETEiJ_G0033681) #12	Tfdp2 (MGP_SPRETEiJ_G0033680) #13	Gk5 (MGP_SPRETEiJ_G0033679) #14	Xrn1 (MGP_SPRETEiJ_G0033678) #15	Atr (MGP_SPRETEiJ_G0033677) #16	Pls1 (MGP_SPRETEiJ_G0033676) #18	Trpc1 (MGP_SPRETEiJ_G0033675) #19	Pcolce2 (MGP_SPRETEiJ_G0033674) #20	Paqr9 (MGP_SPRETEiJ_G0033673)	U2surp (MGP_SPRETEiJ_G0033672) #22	Chst2 (MGP_SPRETEiJ_G0033671) #23	Slc9a9 (MGP_SPRETEiJ_G0033670) #24	Dipk2a (MGP_SPRETEiJ_G0033669) #25	Plod2 (MGP_SPRETEiJ_G0033668) #36	Plscr4 (MGP_SPRETEiJ_G0033667) #37	1700057G04Rik (MGP_SPRETEiJ_G0033666)	MGP_SPRETEiJ_G0033665	Plscr1 (MGP_SPRETEiJ_G0033664)	Plscr5 (MGP_SPRETEiJ_G0033663)	MGP_SPRETEiJ_G0033662	Zic1 (MGP_SPRETEiJ_G0033661)	Zic4 (MGP_SPRETEiJ_G0033660)	Tbc1d2b (MGP_SPRETEiJ_G0033659)	Adamts7 (MGP_SPRETEiJ_G0033658)	Morf4l1 (MGP_SPRETEiJ_G0033657)
Mouse	MODERN SPECIES	18	Spsb4 (ENSMUSG00000046997)	Pxylp1 (ENSMUSG00000043587)	Zbtb38 (ENSMUSG00000040433) #8	Rasa2 (ENSMUSG00000032413) #9	Gm28729 (ENSMUSG00000099564) #10	Rnf7 (ENSMUSG00000051234) ##11	Atp1b3 (ENSMUSG00000032412) #12	Tfdp2 (ENSMUSG00000032411) #13	Gk5 (ENSMUSG00000041440) #14	Xrn1 (ENSMUSG00000032410) #15	Atr (ENSMUSG00000032409) #16	Pls1 (ENSMUSG00000049493) #18	Trpc1 (ENSMUSG00000032839) #19	Pcolce2 (ENSMUSG00000015354) #20	Paqr9 (ENSMUSG00000064225)	U2surp (ENSMUSG00000032407) #22	Chst2 (ENSMUSG00000033350) #23	Slc9a9 (ENSMUSG00000031129) #24	Dipk2a (ENSMUSG00000045414) #25	Plod2 (ENSMUSG00000032374) #36	Plscr4 (ENSMUSG00000032377) #37	1700057G04Rik (ENSMUSG00000074139)	Plscr2 (ENSMUSG00000032372)	Plscr1 (ENSMUSG00000032369)	Plscr5 (ENSMUSG00000095654)	Zic4 (ENSMUSG00000036972)	Zic1 (ENSMUSG00000032368)	Tbc1d2b (ENSMUSG00000037410)	Adamts7 (ENSMUSG00000032363)	Morf4l1 (ENSMUSG00000062270)	Ctsh (ENSMUSG00000032359)
Ryukyu mouse	MODERN SPECIES	18	Nmnat3 (MGP_CAROLIEiJ_G0032546)	Clstn2 (MGP_CAROLIEiJ_G0032545)	Trim42 (MGP_CAROLIEiJ_G0032544)	Slc25a36 (MGP_CAROLIEiJ_G0032543)	Spsb4 (MGP_CAROLIEiJ_G0032542)	Pxylp1 (MGP_CAROLIEiJ_G0032541)	Zbtb38 (MGP_CAROLIEiJ_G0032540) #8	Rasa2 (MGP_CAROLIEiJ_G0032539) #9	Atp1b3 (MGP_CAROLIEiJ_G0032538) #12	Tfdp2 (MGP_CAROLIEiJ_G0032537) #13	Xrn1 (MGP_CAROLIEiJ_G0032535) #15	MGP_CAROLIEiJ_G0032534 #16	MGP_CAROLIEiJ_G0032533 #18	Trpc1 (MGP_CAROLIEiJ_G0032532) #19	Paqr9 (MGP_CAROLIEiJ_G0032531)	MGP_CAROLIEiJ_G0032530 #22	Chst2 (MGP_CAROLIEiJ_G0032529) #23	MGP_CAROLIEiJ_G0032527 #25	Plod2 (MGP_CAROLIEiJ_G0032526) #36	1700057G04Rik (MGP_CAROLIEiJ_G0032525)	Plscr2 (MGP_CAROLIEiJ_G0032524)	Plscr1 (MGP_CAROLIEiJ_G0032523)	Plscr5 (MGP_CAROLIEiJ_G0032522)	Zic4 (MGP_CAROLIEiJ_G0032521)	Zic1 (MGP_CAROLIEiJ_G0032520)	Tbc1d2b (MGP_CAROLIEiJ_G0032519)	Adamts7 (MGP_CAROLIEiJ_G0032518)	MGP_CAROLIEiJ_G0032517	MGP_CAROLIEiJ_G0032516	MGP_CAROLIEiJ_G0032515	Ankrd34c (MGP_CAROLIEiJ_G0032514)
Shrew mouse	MODERN SPECIES	1	Slc25a36 (MGP_PahariEiJ_G0015413)	Spsb4 (MGP_PahariEiJ_G0015412)	Pxylp1 (MGP_PahariEiJ_G0015411)	Zbtb38 (MGP_PahariEiJ_G0015410) #8	Rasa2 (MGP_PahariEiJ_G0015409) #9	MGP_PahariEiJ_G0015408 #11	Atp1b3 (MGP_PahariEiJ_G0015407) #12	Tfdp2 (MGP_PahariEiJ_G0015406) #13	Gk5 (MGP_PahariEiJ_G0015405) #14	Xrn1 (MGP_PahariEiJ_G0015404) #15	Atr (MGP_PahariEiJ_G0015403) #16	Pls1 (MGP_PahariEiJ_G0015402) #18	Trpc1 (MGP_PahariEiJ_G0015401) #19	Pcolce2 (MGP_PahariEiJ_G0015400) #20	Paqr9 (MGP_PahariEiJ_G0015399)	U2surp (MGP_PahariEiJ_G0015398) #22	Chst2 (MGP_PahariEiJ_G0015397) #23	Slc9a9 (MGP_PahariEiJ_G0015396) #24	Dipk2a (MGP_PahariEiJ_G0015395) #25	Plod2 (MGP_PahariEiJ_G0015394) #36	Plscr4 (MGP_PahariEiJ_G0015393) #37	1700057G04Rik (MGP_PahariEiJ_G0015392)	Plscr2 (MGP_PahariEiJ_G0015391)	Plscr1 (MGP_PahariEiJ_G0015390)	Plscr5 (MGP_PahariEiJ_G0015389)	Zic4 (MGP_PahariEiJ_G0015388)	Zic1 (MGP_PahariEiJ_G0015387)	MGP_PahariEiJ_G0015386	Adamts7 (MGP_PahariEiJ_G0015385)	Morf4l1 (MGP_PahariEiJ_G0015384)	Ctsh (MGP_PahariEiJ_G0015383)
Rat	MODERN SPECIES	18	LOC102551788 (ENSRNOG00000053034) #10	Rnf7 (ENSRNOG00000011663) #11	AABR07067339.1 (ENSRNOG00000022456)	Atp1b3 (ENSRNOG00000011501) #12	AABR07071195.1 (ENSRNOG00000030296)	Tfdp2 (ENSRNOG00000011241) #13	Gk5 (ENSRNOG00000010942) #14	Xrn1 (ENSRNOG00000042951) #15	ENSRNOG00000066967	Atr (ENSRNOG00000010027) #16	ENSRNOG00000066029 #17	Pls1 (ENSRNOG00000009945) #18	Trpc1 (ENSRNOG00000054902) #19	PCOLCE2 (ENSRNOG00000046848) #20	LOC501038 (ENSRNOG00000033654) #21	U2surp (ENSRNOG00000008607) #22	ENSRNOG00000065106	Chst2 (ENSRNOG00000047734) #23	Slc9a9 (ENSRNOG00000008554) #24	Dipk2a (ENSRNOG00000008519) #25	AABR07071101.1 (ENSRNOG00000008363)	Plod2 (ENSRNOG00000030183) #36	Plscr4 (ENSRNOG00000008151) #37	LOC102551265 (ENSRNOG00000030551)	Plscr2 (ENSRNOG00000064984)	Plscr1 (ENSRNOG00000008048)	Plscr5 (ENSRNOG00000047917)	Zic4 (ENSRNOG00000014871)	Zic1 (ENSRNOG00000014644)	Tbc1d2b (ENSRNOG00000014543)	Adamts7 (ENSRNOG00000028036)
Cricetidae	ANCESTRAL SPECIES	4	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k.b	ENSGT00940000154435.k.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT00940000157737	ENSGT00940000159819	ENSGT00950000182965.a.b.b.b.h	ENSGT00940000160227
Cricetidae_B	ANCESTRAL SPECIES	23	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k.b	ENSGT00940000154435.k.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT00940000157737	ENSGT00940000159819	ENSGT00950000182965.a.b.b.b.h	ENSGT00940000160227
Prairie vole	MODERN SPECIES	95	Spsb4 (ENSMOCG00000012549)	Pxylp1 (ENSMOCG00000009663)	Zbtb38 (ENSMOCG00000017136) #8	Rasa2 (ENSMOCG00000000075) #9	Gm28729 (ENSMOCG00000015027) #10	ENSMOCG00000019098 #11	Atp1b3 (ENSMOCG00000007305) #12	Tfdp2 (ENSMOCG00000004728) #13	Gk5 (ENSMOCG00000000891) #14	Xrn1 (ENSMOCG00000008665) #15	Atr (ENSMOCG00000015022) #16	Pls1 (ENSMOCG00000001489) #18	Trpc1 (ENSMOCG00000000260) #19	Pcolce2 (ENSMOCG00000008199) #20	Paqr9 (ENSMOCG00000001088)	U2surp (ENSMOCG00000000631) #22	Chst2 (ENSMOCG00000014642) #23	Slc9a9 (ENSMOCG00000007053) #24	ENSMOCG00000015904 #25	ENSMOCG00000022382	Plod2 (ENSMOCG00000014848) #36	Plscr4 (ENSMOCG00000006239) #37	1700057G04Rik (ENSMOCG00000000750)	Plscr2 (ENSMOCG00000000143)	Plscr1 (ENSMOCG00000006478)	Plscr5 (ENSMOCG00000012563)	ENSMOCG00000000978	Zic1 (ENSMOCG00000015344)	Tbc1d2b (ENSMOCG00000010939)	Adamts7 (ENSMOCG00000010540)	ENSMOCG00000002832
Northern American deer mouse	MODERN SPECIES	20	Zbtb38 (ENSPEMG00000021180) #8	ENSPEMG00000020968	Rasa2 (ENSPEMG00000020689) #9	Gm28729 (ENSPEMG00000021490) #10	ENSPEMG00000020541 #11	ENSPEMG00000025894 #12	Tfdp2 (ENSPEMG00000020459) #13	Gk5 (ENSPEMG00000021213) #14	ENSPEMG00000028629	Xrn1 (ENSPEMG00000020610) #15	Atr (ENSPEMG00000022407) #16	Pls1 (ENSPEMG00000023583) #18	Trpc1 (ENSPEMG00000021151) #19	Pcolce2 (ENSPEMG00000021235) #20	Paqr9 (ENSPEMG00000021256)	U2surp (ENSPEMG00000020825) #22	Chst2 (ENSPEMG00000019658) #23	Slc9a9 (ENSPEMG00000019907) #24	Dipk2a (ENSPEMG00000019631) #25	ENSPEMG00000019304	Plod2 (ENSPEMG00000023460) #36	Plscr4 (ENSPEMG00000019619) #37	1700057G04Rik (ENSPEMG00000019593)	Plscr2 (ENSPEMG00000019567)	Plscr1 (ENSPEMG00000019486)	Plscr5 (ENSPEMG00000019462)	Zic4 (ENSPEMG00000026607)	Zic1 (ENSPEMG00000019412)	Tbc1d2b (ENSPEMG00000000960)	Adamts7 (ENSPEMG00000017976)	Morf4l1 (ENSPEMG00000019429)
Cricetinae	ANCESTRAL SPECIES	6	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k.b	ENSGT00940000154435.k.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT00940000157737	ENSGT00940000159819	ENSGT00950000182965.a.b.b.b.h	ENSGT00940000160227
Chinese hamster chok1gshd	MODERN SPECIES	284	Spsb4 (ENSCGRG00001018096)	Pxylp1 (ENSCGRG00001018642)	Zbtb38 (ENSCGRG00001001498) #8	Rasa2 (ENSCGRG00001008148) #9	Gm28729 (ENSCGRG00001023152) #10	ENSCGRG00001019917 #11	Atp1b3 (ENSCGRG00001014009) #12	Tfdp2 (ENSCGRG00001015207) #13	Gk5 (ENSCGRG00001021959) #14	Xrn1 (ENSCGRG00001019411) #15	Atr (ENSCGRG00001018561) #16	Pls1 (ENSCGRG00001019620) #18	Trpc1 (ENSCGRG00001008354) #19	Pcolce2 (ENSCGRG00001024152) #20	Paqr9 (ENSCGRG00001011034)	U2surp (ENSCGRG00001019402) #22	Chst2 (ENSCGRG00001005270) #23	Slc9a9 (ENSCGRG00001011746) #24	ENSCGRG00001019093 #25	Plod2 (ENSCGRG00001022906) #36	Plscr4 (ENSCGRG00001014929) #37	ENSCGRG00001018742	Plscr2 (ENSCGRG00001021981)	Plscr1 (ENSCGRG00001022988)	Plscr5 (ENSCGRG00001013925)	ENSCGRG00001017214	ENSCGRG00001020059	Zic4 (ENSCGRG00001024222)	Zic1 (ENSCGRG00001015672)	ENSCGRG00001012856	Tbc1d2b (ENSCGRG00001018935)
Golden Hamster	MODERN SPECIES	719	Trim42 (ENSMAUG00000011369)	Slc25a36 (ENSMAUG00000010528)	Spsb4 (ENSMAUG00000001794)	Pxylp1 (ENSMAUG00000001196)	Zbtb38 (ENSMAUG00000000765) #8	Rasa2 (ENSMAUG00000006323) #9	Gm28729 (ENSMAUG00000018725) #10	ENSMAUG00000016180 #11	Tfdp2 (ENSMAUG00000016744) #13	Gk5 (ENSMAUG00000014487) #14	ENSMAUG00000014268 #15	Atr (ENSMAUG00000013539) #16	Pls1 (ENSMAUG00000014147) #18	Trpc1 (ENSMAUG00000010246) #19	Pcolce2 (ENSMAUG00000013362) #20	ENSMAUG00000009255 #22	Chst2 (ENSMAUG00000006721) #23	Slc9a9 (ENSMAUG00000008995) #24	Dipk2a (ENSMAUG00000007688) #25	Plod2 (ENSMAUG00000003215) #36	Plscr4 (ENSMAUG00000009045) #37	1700057G04Rik (ENSMAUG00000002609)	Plscr2 (ENSMAUG00000006078)	Plscr1 (ENSMAUG00000000569)	Plscr5 (ENSMAUG00000001158)	Zic4 (ENSMAUG00000000134)	Zic1 (ENSMAUG00000000093)	ENSMAUG00000000776	Tbc1d2b (ENSMAUG00000000447)	Adamts7 (ENSMAUG00000015892)	ENSMAUG00000013401
Upper Galilee mountains blind mole rat	MODERN SPECIES	1560															Paqr9 (ENSNGAG00000014583)	U2surp (ENSNGAG00000013707) #22	Chst2 (ENSNGAG00000013869) #23
Lesser Egyptian jerboa	MODERN SPECIES	103	Pxylp1 (ENSJJAG00000020595)	Zbtb38 (ENSJJAG00000020897) #8	Rasa2 (ENSJJAG00000021872) #9	Gm28729 (ENSJJAG00000023069) #10	ENSJJAG00000023206	ENSJJAG00000000084 #12	Tfdp2 (ENSJJAG00000000515) #13	Gk5 (ENSJJAG00000002736) #14	Xrn1 (ENSJJAG00000010863) #15	Atr (ENSJJAG00000015162) #16	Pls1 (ENSJJAG00000017370) #18	Trpc1 (ENSJJAG00000018439) #19	Pcolce2 (ENSJJAG00000019087) #20	ENSJJAG00000014039	Paqr9 (ENSJJAG00000019596)	U2surp (ENSJJAG00000021595) #22	Chst2 (ENSJJAG00000021652) #23	Slc9a9 (ENSJJAG00000022538) #24	ENSJJAG00000009483 #25	ENSJJAG00000009762	ENSJJAG00000010214	ENSJJAG00000010488	ENSJJAG00000010643	Plod2 (ENSJJAG00000013305) #36	Plscr4 (ENSJJAG00000017748) #37	ENSJJAG00000017891	ENSJJAG00000017330	1700057G04Rik (ENSJJAG00000020060)	ENSJJAG00000020283	ENSJJAG00000020887	Plscr5 (ENSJJAG00000000244)
Kangaroo rat	MODERN SPECIES	443	Trim42 (ENSDORG00000009003)	Slc25a36 (ENSDORG00000011634)	Pxylp1 (ENSDORG00000009808)	ENSDORG00000005705 #8	Rasa2 (ENSDORG00000001995) #9	Gm28729 (ENSDORG00000029603) #10	ENSDORG00000025570 #11	ENSDORG00000029879	ENSDORG00000023219 ##13	Gk5 (ENSDORG00000023582) #14	Xrn1 (ENSDORG00000013833) #15	Atr (ENSDORG00000000389) #16	Pls1 (ENSDORG00000009841) #18	Trpc1 (ENSDORG00000013958) #19	Pcolce2 (ENSDORG00000013959) #20	ENSDORG00000005201 #22	Slc9a9 (ENSDORG00000011135) #24	ENSDORG00000028495 #25	Plod2 (ENSDORG00000003217) #36	1700057G04Rik (ENSDORG00000014306)	Plscr5 (ENSDORG00000028115)	ENSDORG00000024749	Cpb1 (ENSDORG00000001786)	Cpa3 (ENSDORG00000001789)	Gyg (ENSDORG00000016120)	Hltf (ENSDORG00000016121)	Hps3 (ENSDORG00000001208)	Cp (ENSDORG00000001212)	Tm4sf1 (ENSDORG00000000505)	Tm4sf4 (ENSDORG00000029592)	Commd2 (ENSDORG00000006954)
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000164931	ENSGT00940000154435.k	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Sciuridae	ANCESTRAL SPECIES	26	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481.n #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Marmotini	ANCESTRAL SPECIES	25	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481.n #11	ENSGT00940000160511	ENSGT01030000234579.A.b.p #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Marmotini_b	ANCESTRAL SPECIES	46	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481.n #11	ENSGT00940000160511	ENSGT01030000234579.A.b.p #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.l	ENSGT00940000154435.k	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Squirrel	MODERN SPECIES	140	ZBTB38 (ENSSTOG00000025333) #8	RASA2 (ENSSTOG00000010098) #9	ENSSTOG00000031767 #10	RNF7 (ENSSTOG00000014964) #11	Grk7 (ENSSTOG00000021157)	ENSSTOG00000013235 #12	TFDP2 (ENSSTOG00000013241) #13	GK5 (ENSSTOG00000013540) #14	XRN1 (ENSSTOG00000013552) #15	ATR (ENSSTOG00000021792) #16	ENSSTOG00000034418	PLS1 (ENSSTOG00000009305) #18	TRPC1 (ENSSTOG00000024889) #19	PCOLCE2 (ENSSTOG00000015983) #20	PAQR9 (ENSSTOG00000028103)	U2SURP (ENSSTOG00000015997) #22	CHST2 (ENSSTOG00000022233) #23	SLC9A9 (ENSSTOG00000016009) #24	BDNF (ENSSTOG00000009446)	LIN7C (ENSSTOG00000008941)	LGR4 (ENSSTOG00000021020)	CCDC34 (ENSSTOG00000033444)	BBOX1 (ENSSTOG00000015028)	ENSSTOG00000011160	SLC5A12 (ENSSTOG00000012602)	ANO3 (ENSSTOG00000012581)	ENSSTOG00000012593	LUZP2 (ENSSTOG00000013906)
Arctic ground squirrel	MODERN SPECIES	35	PXYLP1 (ENSUPAG00010008036)	ZBTB38 (ENSUPAG00010008043) #8	RASA2 (ENSUPAG00010008044) #9	ENSUPAG00010008087 #10	ENSUPAG00010008104 #11	GRK7 (ENSUPAG00010008111)	ATP1B3 (ENSUPAG00010008116) #12	TFDP2 (ENSUPAG00010008140) #13	GK5 (ENSUPAG00010008189) #14	XRN1 (ENSUPAG00010008232) #15	ATR (ENSUPAG00010008391) #16	PLS1 (ENSUPAG00010008455) #18	TRPC1 (ENSUPAG00010008473) #19	PCOLCE2 (ENSUPAG00010008520) #20	PAQR9 (ENSUPAG00010008526)	U2SURP (ENSUPAG00010008534) #22	CHST2 (ENSUPAG00010008705) #23	SLC9A9 (ENSUPAG00010008711) #24	DIPK2A (ENSUPAG00010008726) #25	PLOD2 (ENSUPAG00010008740) #36	PLSCR4 (ENSUPAG00010008768) #37	ENSUPAG00010008778	ENSUPAG00010008798	PLSCR5 (ENSUPAG00010008835)	ZIC4 (ENSUPAG00010008847)	ZIC1 (ENSUPAG00010008881)
Alpin marmot	MODERN SPECIES	19	ENSMMMG00000017581 #8	RASA2 (ENSMMMG00000017563) #9	ENSMMMG00000017545 #10	RNF7 (ENSMMMG00000017538) #11	ENSMMMG00000017532 #12	TFDP2 (ENSMMMG00000017474) #13	GK5 (ENSMMMG00000017449) #14	ENSMMMG00000017439	XRN1 (ENSMMMG00000017320) #15	ENSMMMG00000017314	ATR (ENSMMMG00000017237) #16	PLS1 (ENSMMMG00000017219) #18	TRPC1 (ENSMMMG00000017198) #19	PCOLCE2 (ENSMMMG00000017184) #20	PAQR9 (ENSMMMG00000017183)	U2SURP (ENSMMMG00000017089) #22	CHST2 (ENSMMMG00000017088) #23	SLC9A9 (ENSMMMG00000017071) #24	ENSMMMG00000017056 #25	ENSMMMG00000017052	ENSMMMG00000017044 #27	ENSMMMG00000017033	PLOD2 (ENSMMMG00000017004) #36	PLSCR4 (ENSMMMG00000016989) #37	ENSMMMG00000016973	ENSMMMG00000016964	ENSMMMG00000016886	PLSCR5 (ENSMMMG00000016875)	ZIC4 (ENSMMMG00000016860)	ZIC1 (ENSMMMG00000016851)	AGTR1 (ENSMMMG00000016843)
Eurasian red squirrel	MODERN SPECIES	1	RASA2 (ENSSVLG00005008569) #9	RNF7 (ENSSVLG00005008607) #11	GRK7 (ENSSVLG00005008644)	ENSSVLG00005008685 #12	TFDP2 (ENSSVLG00005008716) #13	ENSSVLG00005008823	GK5 (ENSSVLG00005008881) #14	XRN1 (ENSSVLG00005009003) #15	ATR (ENSSVLG00005009179) #16	PLS1 (ENSSVLG00005009713) #18	ENSSVLG00005009814	TRPC1 (ENSSVLG00005009874) #19	ENSSVLG00005009949	PCOLCE2 (ENSSVLG00005009992) #20	PAQR9 (ENSSVLG00005010124)	U2SURP (ENSSVLG00005010214) #22	CHST2 (ENSSVLG00005011831) #23	SLC9A9 (ENSSVLG00005011865) #24	DIPK2A (ENSSVLG00005011903) #25	ENSSVLG00005011980	PLOD2 (ENSSVLG00005012138) #36	PLSCR4 (ENSSVLG00005012337) #37	ENSSVLG00005012558	PLSCR1 (ENSSVLG00005012636)	PLSCR5 (ENSSVLG00005012728)	ZIC4 (ENSSVLG00005012907)	ZIC1 (ENSSVLG00005013067)	ENSSVLG00005013147	AGTR1 (ENSSVLG00005013217)	CPB1 (ENSSVLG00005013271)	CPA3 (ENSSVLG00005013362)
Hystricomorpha	ANCESTRAL SPECIES	6	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.k.g.a	ENSGT00940000154435.k.h	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Hystricomorpha_a	ANCESTRAL SPECIES	4	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.k.g.a	ENSGT00940000154435.k.g.b	ENSGT00940000154435.k.h	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
Guinea pig	MODERN SPECIES	8	ZBTB38 (ENSCPOG00000033797) #8	RASA2 (ENSCPOG00000014013) #9	ENSCPOG00000032259 #10	RNF7 (ENSCPOG00000036031) #11	GRK7 (ENSCPOG00000013262)	ENSCPOG00000003739 #12	TFDP2 (ENSCPOG00000013203) #13	GK5 (ENSCPOG00000004732) #14	ENSCPOG00000003458 #15	ENSCPOG00000035199 #15	ATR (ENSCPOG00000007001) #16	PLS1 (ENSCPOG00000003196) #18	TRPC1 (ENSCPOG00000003198) #19	PCOLCE2 (ENSCPOG00000009999) #20	PAQR9 (ENSCPOG00000021386)	U2SURP (ENSCPOG00000011656) #22	CHST2 (ENSCPOG00000026369) #23	SLC9A9 (ENSCPOG00000000663) #24	DIPK2A (ENSCPOG00000009308) #25	ENSCPOG00000026394	PLOD2 (ENSCPOG00000014514) #36	PLSCR4 (ENSCPOG00000009496) #37	ENSCPOG00000007099	ENSCPOG00000030970	ENSCPOG00000030500	ENSCPOG00000030198	PLSCR5 (ENSCPOG00000015238)	ZIC4 (ENSCPOG00000010981)	AGTR1 (ENSCPOG00000007610)	CPB1 (ENSCPOG00000001475)	CPA3 (ENSCPOG00000001479)
Hystricomorpha_b	ANCESTRAL SPECIES	45	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909.j #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.k.g.a	ENSGT00940000154435.k.g.b	ENSGT00940000154435.k.h	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
Long-tailed chinchilla	DUPLICATION
Long-tailed chinchilla	MODERN SPECIES	215	ENSCLAG00000001033	SPSB4 (ENSCLAG00000000956)	PXYLP1 (ENSCLAG00000005226)	ZBTB38 (ENSCLAG00000005110) #8	RASA2 (ENSCLAG00000004874) #9	ENSCLAG00000004716 #10	ATP1B3 (ENSCLAG00000004199) #12	TFDP2 (ENSCLAG00000003994) #13	GK5 (ENSCLAG00000003833) #14	XRN1 (ENSCLAG00000001451) #15	ATR (ENSCLAG00000001152) #16	PLS1 (ENSCLAG00000001023) #18	TRPC1 (ENSCLAG00000003616) #19	PCOLCE2 (ENSCLAG00000001585) #20	PAQR9 (ENSCLAG00000017569)	ENSCLAG00000001331 #22	CHST2 (ENSCLAG00000017504) #23	SLC9A9 (ENSCLAG00000001151) #24	DIPK2A (ENSCLAG00000001078) #25
Long-tailed chinchilla	MODERN SPECIES	113	LHX9 (ENSCLAG00000010693)	C1orf53 (ENSCLAG00000009911)	DENND1B (ENSCLAG00000011099)	CRB1 (ENSCLAG00000013182)	ZBTB41 (ENSCLAG00000010852)	ASPM (ENSCLAG00000009548)	F13B (ENSCLAG00000014527)	ENSCLAG00000014293	KCNT2 (ENSCLAG00000010650)	B3GALT2 (ENSCLAG00000010521)	CDC73 (ENSCLAG00000011107)	GLRX2 (ENSCLAG00000010009)	RO60 (ENSCLAG00000016391)	ENSCLAG00000014784	RGS2 (ENSCLAG00000013377)	ENSCLAG00000011055 #22	RGS13 (ENSCLAG00000010047)	RGS1 (ENSCLAG00000009691)	ENSCLAG00000009249	RGS21 (ENSCLAG00000011554)	RGS18 (ENSCLAG00000010916)	BRINP3 (ENSCLAG00000009361)	PLA2G4A (ENSCLAG00000013091)	PTGS2 (ENSCLAG00000010309)	PDC (ENSCLAG00000009883)	ODR4 (ENSCLAG00000011867)	TPR (ENSCLAG00000014758)	ENSCLAG00000009204	HMCN1 (ENSCLAG00000012763)	IVNS1ABP (ENSCLAG00000010322)	SWT1 (ENSCLAG00000013959)
Degu	MODERN SPECIES	69	ENSODEG00000010015 #11	ENSODEG00000009611	ENSODEG00000010281	GRK7 (ENSODEG00000009406)	ENSODEG00000010038 #12	TFDP2 (ENSODEG00000009381) #13	GK5 (ENSODEG00000009274) #14	ENSODEG00000009043	ENSODEG00000008804 #15	ATR (ENSODEG00000011542) #16	ENSODEG00000019858	PLS1 (ENSODEG00000011164) #18	TRPC1 (ENSODEG00000010221) #19	PCOLCE2 (ENSODEG00000009524) #20	PAQR9 (ENSODEG00000019884)	U2SURP (ENSODEG00000008767) #22	CHST2 (ENSODEG00000010593) #23	ENSODEG00000008750	SLC9A9 (ENSODEG00000008259) #24	ENSODEG00000010395	ENSODEG00000019572	DIPK2A (ENSODEG00000008791) #25	ENSODEG00000008615	ENSODEG00000008712	ENSODEG00000008324	PLOD2 (ENSODEG00000009443) #36	PLSCR4 (ENSODEG00000009888) #37	ENSODEG00000008158	ENSODEG00000009747	PLSCR5 (ENSODEG00000009189)	ZIC4 (ENSODEG00000008678)
Naked mole-rat female	MODERN SPECIES	27	ZBTB38 (ENSHGLG00000011669) #8	RASA2 (ENSHGLG00000012050) #9	RNF7 (ENSHGLG00000038279) #11	ENSHGLG00000033069	GRK7 (ENSHGLG00000012629)	ENSHGLG00000012755 #12	TFDP2 (ENSHGLG00000013441) #13	ENSHGLG00000033455 #32	GK5 (ENSHGLG00000014374) #14	XRN1 (ENSHGLG00000014476) #15	ATR (ENSHGLG00000016875) #16	TRPC1 (ENSHGLG00000017039) #19	ENSHGLG00000048356 #32	PCOLCE2 (ENSHGLG00000017054) #20	PAQR9 (ENSHGLG00000017213)	U2SURP (ENSHGLG00000017227) #22	CHST2 (ENSHGLG00000041521) #23	ENSHGLG00000018200 #24	ENSHGLG00000011825	ENSHGLG00000044802	ENSHGLG00000019576	ENSHGLG00000003222	SIAH1 (ENSHGLG00000003142)	ENSHGLG00000003081	ENSHGLG00000048075	ENSHGLG00000003031	ENSHGLG00000039002 #32	ENSHGLG00000047723	ENSHGLG00000048126	ENSHGLG00000012004	ENSHGLG00000032846
Lagomorpha	ANCESTRAL SPECIES	6	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909.i.a ##13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.n	ENSGT00940000154435.m.a	ENSGT00940000161728	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674.c	ENSGT00910000144305	ENSGT00390000015458
Rabbit	MODERN SPECIES	5	TRIM42 (ENSOCUG00000005488)	ENSOCUG00000002085	PXYLP1 (ENSOCUG00000007855)	ZBTB38 (ENSOCUG00000003699) #8	RASA2 (ENSOCUG00000001219) #9	GRK7 (ENSOCUG00000000636)	ATP1B3 (ENSOCUG00000000338) #12	TFDP2 (ENSOCUG00000016458) ##13	GK5 (ENSOCUG00000014237) #14	XRN1 (ENSOCUG00000001861) #15	ATR (ENSOCUG00000001874) #16	PLS1 (ENSOCUG00000017700) #18	TRPC1 (ENSOCUG00000017709) #19	PCOLCE2 (ENSOCUG00000013111) #20	PAQR9 (ENSOCUG00000016734)	U2SURP (ENSOCUG00000012121) #22	CHST2 (ENSOCUG00000012132) #23	SLC9A9 (ENSOCUG00000009911) #24	DIPK2A (ENSOCUG00000012616) #25	ENSOCUG00000038414	PLOD2 (ENSOCUG00000001461) #36	PLSCR4 (ENSOCUG00000015564) #37	ENSOCUG00000023944	ENSOCUG00000029550	ENSOCUG00000012892	PLSCR5 (ENSOCUG00000002500)	ENSOCUG00000037397	ZIC4 (ENSOCUG00000010959)	ENSOCUG00000021417	ENSOCUG00000026392	AGTR1 (ENSOCUG00000025557)
Pika	MODERN SPECIES	4235															PAQR9 (ENSOPRG00000011325)	U2SURP (ENSOPRG00000011328) #22	SLC9A9 (ENSOPRG00000011394) #24
Tree shrew	MODERN SPECIES	4008												ATR (ENSTBEG00000013815) #16	PLS1 (ENSTBEG00000015574) #18	TRPC1 (ENSTBEG00000015987) #19	PCOLCE2 (ENSTBEG00000016227) #20	U2SURP (ENSTBEG00000016313) #22
Primates	ANCESTRAL SPECIES	1	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909.d #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.o.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Lemuriformes	ANCESTRAL SPECIES	30	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909.d #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.o.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Mouse lemur	MODERN SPECIES		PXYLP1 (ENSMICG00000048945)	ZBTB38 (ENSMICG00000049344) #8	RASA2 (ENSMICG00000049339) #9	RNF7 (ENSMICG00000049320) #11	GRK7 (ENSMICG00000049413)	ATP1B3 (ENSMICG00000049313) #12	ENSMICG00000049520	TFDP2 (ENSMICG00000049186) #13	GK5 (ENSMICG00000049424) #14	XRN1 (ENSMICG00000048948) #15	ATR (ENSMICG00000049477) #16	PLS1 (ENSMICG00000049092) #18	TRPC1 (ENSMICG00000049470) #19	PCOLCE2 (ENSMICG00000048890) #20	PAQR9 (ENSMICG00000049417)	U2SURP (ENSMICG00000049294) #22	CHST2 (ENSMICG00000048867) #23	ENSMICG00000049556	SLC9A9 (ENSMICG00000049232) #24	DIPK2A (ENSMICG00000048950) #25	ENSMICG00000049299	PLOD2 (ENSMICG00000049252) #36	PLSCR4 (ENSMICG00000048916) #37	ENSMICG00000049069	PLSCR1 (ENSMICG00000049018)	PLSCR5 (ENSMICG00000049484)	ZIC4 (ENSMICG00000049129)	ZIC1 (ENSMICG00000049488)	AGTR1 (ENSMICG00000049373)	CPB1 (ENSMICG00000048946)	CPA3 (ENSMICG00000049222)
Lemuriformes_a	ANCESTRAL SPECIES	53	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909.d #13	ENSGT00940000153988.B.f	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25
Greater bamboo lemur	MODERN SPECIES	71			ENSPSMG00000007303	ENSPSMG00000007292	GK5 (ENSPSMG00000007275) #14	ENSPSMG00000007251	ENSPSMG00000007238	ENSPSMG00000007236	XRN1 (ENSPSMG00000007127) #15	ATR (ENSPSMG00000006948) #16	PLS1 (ENSPSMG00000006858) #18	TRPC1 (ENSPSMG00000006833) #19	ENSPSMG00000006785	PCOLCE2 (ENSPSMG00000006776) #20	PAQR9 (ENSPSMG00000006758)	U2SURP (ENSPSMG00000006545) #22	CHST2 (ENSPSMG00000006433) #23	SLC9A9 (ENSPSMG00000006417) #24	DIPK2A (ENSPSMG00000006404) #25
Coquerels sifaka	MODERN SPECIES	382	PXYLP1 (ENSPCOG00000027701)	RASA2 (ENSPCOG00000016241) #9	RNF7 (ENSPCOG00000023214) #11	GRK7 (ENSPCOG00000015353)	ATP1B3 (ENSPCOG00000021420) #12	TFDP2 (ENSPCOG00000023612) #13	ENSPCOG00000014830	ENSPCOG00000027161	GK5 (ENSPCOG00000026596) #14	ENSPCOG00000028141	XRN1 (ENSPCOG00000013089) #15	ATR (ENSPCOG00000019808) #16	PLS1 (ENSPCOG00000022615) #18	TRPC1 (ENSPCOG00000011684) #19	PCOLCE2 (ENSPCOG00000023954) #20	U2SURP (ENSPCOG00000019599) #22	CHST2 (ENSPCOG00000007360) #23	SLC9A9 (ENSPCOG00000023066) #24	ENSPCOG00000017043	DIPK2A (ENSPCOG00000003148) #25
Bushbaby	MODERN SPECIES	147	SPSB4 (ENSOGAG00000027600)	PXYLP1 (ENSOGAG00000009393)	ZBTB38 (ENSOGAG00000009394) #8	RASA2 (ENSOGAG00000002470) #9	RNF7 (ENSOGAG00000008659) #11	GRK7 (ENSOGAG00000009576)	ATP1B3 (ENSOGAG00000008662) #12	TFDP2 (ENSOGAG00000000168) #13	GK5 (ENSOGAG00000000169) #14	XRN1 (ENSOGAG00000000170) #15	ATR (ENSOGAG00000000171) #16	PLS1 (ENSOGAG00000000755) #18	TRPC1 (ENSOGAG00000000759) #19	PCOLCE2 (ENSOGAG00000013136) #20	PAQR9 (ENSOGAG00000003917)	U2SURP (ENSOGAG00000004335) #22	CHST2 (ENSOGAG00000027881) #23	SLC9A9 (ENSOGAG00000004342) #24	DIPK2A (ENSOGAG00000011489) #25	ENSOGAG00000024209	PLOD2 (ENSOGAG00000009905) #36	ENSOGAG00000034254 #37	PLSCR4 (ENSOGAG00000009912) #37	ENSOGAG00000031786	PLSCR1 (ENSOGAG00000017010)	PLSCR5 (ENSOGAG00000011154)	ZIC4 (ENSOGAG00000007463)	ZIC1 (ENSOGAG00000007465)	ENSOGAG00000032175	AGTR1 (ENSOGAG00000008654)	CPB1 (ENSOGAG00000008314)
Haplorrhini	ANCESTRAL SPECIES	5	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Tarsier	MODERN SPECIES	7003														TRPC1 (ENSTSYG00000014145) #19	PCOLCE2 (ENSTSYG00000007806) #20	U2SURP (ENSTSYG00000008889) #22
Simiiformes	ANCESTRAL SPECIES	1	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000164933	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674.i.a
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.v #11	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000164933	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674.i.a.a
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00940000158201 #9	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x #12	ENSGT00940000157909 #13	ENSGT00510000046985.i	ENSGT01000000214434.A #14	ENSGT00940000156225.d	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000164933	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00390000004380.m.b	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x #12	ENSGT00940000157909 #13	ENSGT00510000046985.i	ENSGT01000000214434.A #14	ENSGT00940000156225.d	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000164933	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00390000004380.m.b	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x #12	ENSGT00940000157909 #13	ENSGT00510000046985.i	ENSGT01000000214434.A #14	ENSGT00940000156225.d	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000164933	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00390000004380.m.b	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
Macaca	ANCESTRAL SPECIES	5	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x #12	ENSGT00940000157909 #13	ENSGT00510000046985.i	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT00390000015224.c.b.a	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000164933	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00390000004380.m.b	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819
Pig-tailed macaque	MODERN SPECIES	443	PXYLP1 (ENSMNEG00000041720)	RASA2 (ENSMNEG00000034452) #9	ENSMNEG00000039256	RNF7 (ENSMNEG00000027808) #11	GRK7 (ENSMNEG00000032651)	ATP1B3 (ENSMNEG00000035434) #12	TFDP2 (ENSMNEG00000039976) #13	ENSMNEG00000045190	GK5 (ENSMNEG00000038743) #14	XRN1 (ENSMNEG00000034217) #15	ATR (ENSMNEG00000006874) #16	PLS1 (ENSMNEG00000015383) #18	TRPC1 (ENSMNEG00000030705) #19	PCOLCE2 (ENSMNEG00000039023) #20	PAQR9 (ENSMNEG00000001542)	U2SURP (ENSMNEG00000034553) #22	CHST2 (ENSMNEG00000027882) #23	SLC9A9 (ENSMNEG00000039490) #24	DIPK2A (ENSMNEG00000026997) #25	ENSMNEG00000036748	PLOD2 (ENSMNEG00000029275) #36	PLSCR4 (ENSMNEG00000035715) #37	PLSCR2 (ENSMNEG00000003256)	PLSCR1 (ENSMNEG00000034474)	PLSCR5 (ENSMNEG00000038595)	ENSMNEG00000036104	ZIC4 (ENSMNEG00000022641)	ZIC1 (ENSMNEG00000040121)	AGTR1 (ENSMNEG00000032645)	CPB1 (ENSMNEG00000040108)	CPA3 (ENSMNEG00000033180)
Macaca_a	ANCESTRAL SPECIES	5	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT00390000015224.c.b.a	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.a.b.a.b.a	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000164933	ENSGT00940000161728	ENSGT00390000004380.m.b	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819
Crab-eating macaque	MODERN SPECIES	11	PXYLP1 (ENSMFAG00000045625)	ZBTB38 (ENSMFAG00000021549) #8	ENSMFAG00000030557 #9	RNF7 (ENSMFAG00000051836) #11	GRK7 (ENSMFAG00000001701)	ATP1B3 (ENSMFAG00000040649) #12	TFDP2 (ENSMFAG00000040035) #13	GK5 (ENSMFAG00000039065) #14	XRN1 (ENSMFAG00000032599) #15	ATR (ENSMFAG00000001151) #16	ENSMFAG00000054854	PLS1 (ENSMFAG00000002207) #18	TRPC1 (ENSMFAG00000001111) #19	PCOLCE2 (ENSMFAG00000001242) #20	PAQR9 (ENSMFAG00000034764)	U2SURP (ENSMFAG00000031084) #22	ENSMFAG00000060513	CHST2 (ENSMFAG00000029983) #23	SLC9A9 (ENSMFAG00000002921) #24	DIPK2A (ENSMFAG00000037253) #25	ENSMFAG00000003176	ENSMFAG00000054014	PLOD2 (ENSMFAG00000038516) #36	PLSCR4 (ENSMFAG00000003167) #37	ENSMFAG00000048431	PLSCR2 (ENSMFAG00000040596)	ENSMFAG00000054919 ##29	ENSMFAG00000060327	PLSCR5 (ENSMFAG00000031251)	ENSMFAG00000043329	ZIC4 (ENSMFAG00000037880)
Rhesus	MODERN SPECIES	11	PXYLP1 (ENSMMUG00000019697)	ZBTB38 (ENSMMUG00000031526) #8	RASA2 (ENSMMUG00000009418) #9	RNF7 (ENSMMUG00000006648) #11	GRK7 (ENSMMUG00000007387)	ATP1B3 (ENSMMUG00000060612) #12	TFDP2 (ENSMMUG00000011134) #13	GK5 (ENSMMUG00000012151) #14	ENSMMUG00000058668	XRN1 (ENSMMUG00000014038) #15	ATR (ENSMMUG00000007927) #16	PLS1 (ENSMMUG00000055990) #18	TRPC1 (ENSMMUG00000012405) #19	PCOLCE2 (ENSMMUG00000012406) #20	PAQR9 (ENSMMUG00000003927)	U2SURP (ENSMMUG00000002775) #22	CHST2 (ENSMMUG00000002779) #23	SLC9A9 (ENSMMUG00000009694) #24	ENSMMUG00000051153	DIPK2A (ENSMMUG00000017055) #25	ENSMMUG00000057236	ENSMMUG00000013952	ENSMMUG00000051846	ENSMMUG00000049299	PLOD2 (ENSMMUG00000011577) #36	PLSCR4 (ENSMMUG00000007976) #37	ENSMMUG00000046937	PLSCR2 (ENSMMUG00000021755)	PLSCR5 (ENSMMUG00000039078)	ENSMMUG00000059271	ZIC4 (ENSMMUG00000004741)
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00940000156225.d	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164933	ENSGT00940000164931	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00390000004380.m.b	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
Cercopithecinae_d	ANCESTRAL SPECIES	16	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00940000156225.d	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25
Drill	MODERN SPECIES	232											ENSMLEG00000041349 #15	ATR (ENSMLEG00000030611) #16	PLS1 (ENSMLEG00000016393) #18	TRPC1 (ENSMLEG00000040320) #19	PCOLCE2 (ENSMLEG00000032484) #20	U2SURP (ENSMLEG00000021031) #22	CHST2 (ENSMLEG00000027081) #23
Sooty mangabey	MODERN SPECIES	656	SPSB4 (ENSCATG00000038455)	PXYLP1 (ENSCATG00000036840)	ZBTB38 (ENSCATG00000005041) #8	RASA2 (ENSCATG00000033775) #9	RNF7 (ENSCATG00000042225) #11	GRK7 (ENSCATG00000018025)	ATP1B3 (ENSCATG00000040498) #12	TFDP2 (ENSCATG00000035711) #13	GK5 (ENSCATG00000033849) #14	ENSCATG00000031692	XRN1 (ENSCATG00000041794) #15	ATR (ENSCATG00000034316) #16	PLS1 (ENSCATG00000034817) #18	TRPC1 (ENSCATG00000034251) #19	PCOLCE2 (ENSCATG00000025595) #20	U2SURP (ENSCATG00000039024) #22	CHST2 (ENSCATG00000022686) #23	SLC9A9 (ENSCATG00000034835) #24	DIPK2A (ENSCATG00000042655) #25	ENSCATG00000034132
Olive baboon	MODERN SPECIES	11	ZBTB38 (ENSPANG00000018989) #8	RASA2 (ENSPANG00000010060) #9	RNF7 (ENSPANG00000008716) #11	GRK7 (ENSPANG00000026216)	ENSPANG00000051223	ATP1B3 (ENSPANG00000016869) #12	TFDP2 (ENSPANG00000005825) #13	GK5 (ENSPANG00000016944) #14	XRN1 (ENSPANG00000010638) #15	ATR (ENSPANG00000005574) #16	PLS1 (ENSPANG00000002797) #18	TRPC1 (ENSPANG00000017825) #19	PCOLCE2 (ENSPANG00000005937) #20	PAQR9 (ENSPANG00000021399)	ENSPANG00000031969	U2SURP (ENSPANG00000000710) #22	CHST2 (ENSPANG00000007426) #23	ENSPANG00000046116	SLC9A9 (ENSPANG00000007051) #24	ENSPANG00000039164	ENSPANG00000038918	DIPK2A (ENSPANG00000017827) #25	ENSPANG00000015415	ENSPANG00000048643	ENSPANG00000048692	PLOD2 (ENSPANG00000020900) #36	PLSCR4 (ENSPANG00000019530) #37	ENSPANG00000043123	ENSPANG00000039550	PLSCR1 (ENSPANG00000018880)	PLSCR5 (ENSPANG00000023164)
Vervet Monkey	MODERN SPECIES	6	SPSB4 (ENSCSAG00000011185)	PXYLP1 (ENSCSAG00000011192)	ZBTB38 (ENSCSAG00000018910) #8	RASA2 (ENSCSAG00000011201) #9	RNF7 (ENSCSAG00000011205) #11	GRK7 (ENSCSAG00000011224)	ATP1B3 (ENSCSAG00000011237) #12	TFDP2 (ENSCSAG00000011244) #13	GK5 (ENSCSAG00000011252) #14	XRN1 (ENSCSAG00000011265) #15	ATR (ENSCSAG00000011281) #16	PLS1 (ENSCSAG00000011290) #18	TRPC1 (ENSCSAG00000011302) #19	PCOLCE2 (ENSCSAG00000011308) #20	PAQR9 (ENSCSAG00000018908)	U2SURP (ENSCSAG00000011321) #22	CHST2 (ENSCSAG00000018906) #23	SLC9A9 (ENSCSAG00000011341) #24	DIPK2A (ENSCSAG00000011348) #25	PLOD2 (ENSCSAG00000011365) #36	PLSCR4 (ENSCSAG00000011376) #37	PLSCR2 (ENSCSAG00000011381)	PLSCR1 (ENSCSAG00000011390)	PLSCR5 (ENSCSAG00000011398)	ZIC4 (ENSCSAG00000011405)	ZIC1 (ENSCSAG00000011409)	AGTR1 (ENSCSAG00000011417)	CPB1 (ENSCSAG00000011424)	CPA3 (ENSCSAG00000011433)	GYG1 (ENSCSAG00000011436)	HLTF (ENSCSAG00000011449)
Rhinopithecus	ANCESTRAL SPECIES	110	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.u.b.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x #12	ENSGT00940000157909 #13	ENSGT00510000046985.i	ENSGT01000000214434.A #14	ENSGT00940000156225.d	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT00390000015224.c.a.a.b.b
Golden snub-nosed monkey	MODERN SPECIES	2263														PCOLCE2 (ENSRROG00000040858) #20	PAQR9 (ENSRROG00000015882)	U2SURP (ENSRROG00000043548) #22	CHST2 (ENSRROG00000017813) #23	SLC9A9 (ENSRROG00000037651) #24	DIPK2A (ENSRROG00000013599) #25	ENSRROG00000041560
Black snub-nosed monkey	MODERN SPECIES	699										ENSRBIG00000033603	XRN1 (ENSRBIG00000041227) #15	ATR (ENSRBIG00000037499) #16	PLS1 (ENSRBIG00000043960) #18	TRPC1 (ENSRBIG00000023801) #19	PCOLCE2 (ENSRBIG00000033789) #20	U2SURP (ENSRBIG00000041099) #22	CHST2 (ENSRBIG00000026420) #23	SLC9A9 (ENSRBIG00000030019) #24	DIPK2A (ENSRBIG00000011816) #25	ENSRBIG00000031667
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.v #11	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164933	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674.i.a.a	ENSGT00910000144305
Hominidae	ANCESTRAL SPECIES	2	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.v #11	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x.a #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT00910000147832	ENSGT00390000013230	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164933	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x.a.a #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT00910000147832	ENSGT00390000013230	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164933	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
Gorilla	MODERN SPECIES	16	SLC25A36 (ENSGGOG00000024554)	SPSB4 (ENSGGOG00000011522)	PXYLP1 (ENSGGOG00000001732)	RASA2 (ENSGGOG00000023738) #9	ENSGGOG00000037216	RNF7 (ENSGGOG00000001829) #11	GRK7 (ENSGGOG00000013256)	ATP1B3 (ENSGGOG00000027111) #12	TFDP2 (ENSGGOG00000007878) #13	GK5 (ENSGGOG00000003657) #14	XRN1 (ENSGGOG00000008047) #15	ATR (ENSGGOG00000008083) #16	PLS1 (ENSGGOG00000002849) #18	TRPC1 (ENSGGOG00000026926) #19	PCOLCE2 (ENSGGOG00000007872) #20	U2SURP (ENSGGOG00000005563) #22	CHST2 (ENSGGOG00000010984) #23	SLC9A9 (ENSGGOG00000034866) #24	ENSGGOG00000042026	DIPK2A (ENSGGOG00000015140) #25	ENSGGOG00000042601	ENSGGOG00000026282	ENSGGOG00000042473	PLOD2 (ENSGGOG00000014284) #36	PLSCR4 (ENSGGOG00000006475) #37	ENSGGOG00000004864	PLSCR1 (ENSGGOG00000010136)	PLSCR5 (ENSGGOG00000027798)	ZIC4 (ENSGGOG00000042345)	ZIC1 (ENSGGOG00000001101)	AGTR1 (ENSGGOG00000001326)
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x.a.a #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT00910000147832	ENSGT00390000013230	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164933	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
Pan	ANCESTRAL SPECIES	2	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #11	ENSGT00940000160511	ENSGT01030000234579.A.b.x.a.a #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00390000001347.vb.a.b.a.c.b	ENSGT00520000055625.b #25	ENSGT00910000147832	ENSGT00390000013230	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164933	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819
Chimpanzee	MODERN SPECIES	16	PXYLP1 (ENSPTRG00000015469)	ZBTB38 (ENSPTRG00000030108) #8	RASA2 (ENSPTRG00000015472) #9	ENSPTRG00000046551	RNF7 (ENSPTRG00000039248) #11	GRK7 (ENSPTRG00000052431)	ATP1B3 (ENSPTRG00000015476) #12	TFDP2 (ENSPTRG00000015479) #13	GK5 (ENSPTRG00000015480) #14	XRN1 (ENSPTRG00000015482) #15	ATR (ENSPTRG00000015483) #16	PLS1 (ENSPTRG00000015484) #18	TRPC1 (ENSPTRG00000015485) #19	PCOLCE2 (ENSPTRG00000015486) #20	PAQR9 (ENSPTRG00000015488)	U2SURP (ENSPTRG00000015489) #22	CHST2 (ENSPTRG00000043559) #23	SLC9A9 (ENSPTRG00000015491) #24	ENSPTRG00000046723	DIPK2A (ENSPTRG00000015492) #25	ENSPTRG00000051252	ENSPTRG00000049155	PLOD2 (ENSPTRG00000015494) #36	PLSCR4 (ENSPTRG00000015497) #37	PLSCR2 (ENSPTRG00000015498)	PLSCR1 (ENSPTRG00000015499)	PLSCR5 (ENSPTRG00000041967)	ENSPTRG00000050021	ZIC4 (ENSPTRG00000015500)	ZIC1 (ENSPTRG00000044837)	AGTR1 (ENSPTRG00000015503)
Bonobo	MODERN SPECIES	16	SPSB4 (ENSPPAG00000029910)	PXYLP1 (ENSPPAG00000030848)	RASA2 (ENSPPAG00000036725) #9	ENSPPAG00000042586	RNF7 (ENSPPAG00000036147) #11	GRK7 (ENSPPAG00000037494)	ENSPPAG00000038971 #12	TFDP2 (ENSPPAG00000031311) #13	GK5 (ENSPPAG00000041760) #14	XRN1 (ENSPPAG00000010180) #15	ATR (ENSPPAG00000042807) #16	PLS1 (ENSPPAG00000042289) #18	TRPC1 (ENSPPAG00000004252) #19	PCOLCE2 (ENSPPAG00000029354) #20	PAQR9 (ENSPPAG00000009521)	ENSPPAG00000027945 #22	SLC9A9 (ENSPPAG00000040325) #24	ENSPPAG00000029017	DIPK2A (ENSPPAG00000032010) #25	ENSPPAG00000002254	ENSPPAG00000005549	PLOD2 (ENSPPAG00000039540) #36	PLSCR4 (ENSPPAG00000031934) #37	ENSPPAG00000026009	PLSCR1 (ENSPPAG00000037351)	PLSCR5 (ENSPPAG00000034907)	ZIC4 (ENSPPAG00000037404)	ZIC1 (ENSPPAG00000035757)	AGTR1 (ENSPPAG00000035987)	CPB1 (ENSPPAG00000037959)	CPA3 (ENSPPAG00000042270)
Human	MODERN SPECIES	15	SPSB4 (ENSG00000175093)	PXYLP1 (ENSG00000155893)	ZBTB38 (ENSG00000177311) #8	RASA2 (ENSG00000155903) #9	RNF7 (ENSG00000114125) #11	GRK7 (ENSG00000114124)	ATP1B3 (ENSG00000069849) #12	TFDP2 (ENSG00000114126) #13	GK5 (ENSG00000175066) #14	XRN1 (ENSG00000114127) #15	ATR (ENSG00000175054) #16	PLS1 (ENSG00000120756) #18	TRPC1 (ENSG00000144935) #19	PCOLCE2 (ENSG00000163710) #20	PAQR9 (ENSG00000188582)	U2SURP (ENSG00000163714) #22	CHST2 (ENSG00000175040) #23	SLC9A9 (ENSG00000181804) #24	DIPK2A (ENSG00000181744) #25	PLOD2 (ENSG00000152952) #36	PLSCR4 (ENSG00000114698) #37	PLSCR2 (ENSG00000163746)	PLSCR1 (ENSG00000188313)	PLSCR5 (ENSG00000231213)	ZIC4 (ENSG00000174963)	ZIC1 (ENSG00000152977)	AGTR1 (ENSG00000144891)	CPB1 (ENSG00000153002)	CPA3 (ENSG00000163751)	GYG1 (ENSG00000163754)	HLTF (ENSG00000071794)
Orangutan	MODERN SPECIES	16	ZBTB38 (ENSPPYG00000031145) #8	ENSPPYG00000040016	RASA2 (ENSPPYG00000014165) #9	ENSPPYG00000031196 #11	GRK7 (ENSPPYG00000014168)	ENSPPYG00000033921	ATP1B3 (ENSPPYG00000014169) #12	TFDP2 (ENSPPYG00000014170) #13	GK5 (ENSPPYG00000014171) #14	XRN1 (ENSPPYG00000014172) #15	ATR (ENSPPYG00000014173) #16	PLS1 (ENSPPYG00000014174) #18	TRPC1 (ENSPPYG00000014175) #19	ENSPPYG00000014176 #20	PAQR9 (ENSPPYG00000014177)	U2SURP (ENSPPYG00000014178) #22	CHST2 (ENSPPYG00000014179) #23	SLC9A9 (ENSPPYG00000014180) #24	ENSPPYG00000039260	DIPK2A (ENSPPYG00000014182) #25	ENSPPYG00000034648	ENSPPYG00000014183	PLOD2 (ENSPPYG00000029800) #36	PLSCR4 (ENSPPYG00000014185) #37	ENSPPYG00000014186	PLSCR1 (ENSPPYG00000014187)	PLSCR5 (ENSPPYG00000032802)	ZIC4 (ENSPPYG00000014188)	ZIC1 (ENSPPYG00000014189)	AGTR1 (ENSPPYG00000014190)	CPB1 (ENSPPYG00000014191)
Gibbon	MODERN SPECIES	23	ENSNLEG00000036178	RASA2 (ENSNLEG00000004575) #9	RNF7 (ENSNLEG00000033882) #11	GRK7 (ENSNLEG00000004658)	ENSNLEG00000018218	ENSNLEG00000027455	ENSNLEG00000035658	TFDP2 (ENSNLEG00000031256) #13	GK5 (ENSNLEG00000004695) #14	XRN1 (ENSNLEG00000004726) #15	ATR (ENSNLEG00000004792) #16	PLS1 (ENSNLEG00000004830) #18	TRPC1 (ENSNLEG00000004868) #19	ENSNLEG00000035106	PCOLCE2 (ENSNLEG00000004883) #20	U2SURP (ENSNLEG00000004915) #22	CHST2 (ENSNLEG00000004976) #23	ENSNLEG00000005029	SLC9A9 (ENSNLEG00000004981) #24	DIPK2A (ENSNLEG00000005030) #25	ENSNLEG00000027728	ENSNLEG00000033610	PLOD2 (ENSNLEG00000005034) #36	PLSCR4 (ENSNLEG00000005048) #37	AMIGO2 (ENSNLEG00000033325)	PCED1B (ENSNLEG00000005075)	RPAP3 (ENSNLEG00000017909)	ENDOU (ENSNLEG00000017907)	RAPGEF3 (ENSNLEG00000017905)	SLC48A1 (ENSNLEG00000017904)	HDAC7 (ENSNLEG00000017902)
Platyrrhini	ANCESTRAL SPECIES	22	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.u.a #11	ENSGT00940000160511	ENSGT01030000234579.A.b.y.a #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000164933.a	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674.i.a
Cebidae	ANCESTRAL SPECIES	22	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481.u.a #11	ENSGT00940000160511	ENSGT01030000234579.A.b.y.a #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000164933.a	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674.i.a
Cebidae_a	ANCESTRAL SPECIES	12	ENSGT00940000154369.d	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000158201 #9	ENSGT00940000155481.u.a #11	ENSGT00940000160511	ENSGT01030000234579.A.b.z #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b.k #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000164933.a	ENSGT00940000154435.p	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674.i.a
Bolivian squirrel monkey	MODERN SPECIES	83	UBP1 (ENSSBOG00000008483)	FBXL2 (ENSSBOG00000030790)	ENSSBOG00000023948	SUSD5 (ENSSBOG00000018900)	CRTAP (ENSSBOG00000034685)	GLB1 (ENSSBOG00000027999)	CCR4 (ENSSBOG00000020236)	TRIM71 (ENSSBOG00000034396)	ENSSBOG00000035797	CNOT10 (ENSSBOG00000034160)	ENSSBOG00000019688	DYNC1LI1 (ENSSBOG00000009907)	ENSSBOG00000031962	CMTM6 (ENSSBOG00000023893)	CMTM7 (ENSSBOG00000025858)	U2SURP (ENSSBOG00000027984) #22	CHST2 (ENSSBOG00000019094) #23	SLC9A9 (ENSSBOG00000029001) #24	DIPK2A (ENSSBOG00000027031) #25	PLOD2 (ENSSBOG00000030460) #36	PLSCR4 (ENSSBOG00000034850) #37	PLSCR2 (ENSSBOG00000021577)	PLSCR1 (ENSSBOG00000020555)	PLSCR5 (ENSSBOG00000021485)	RYK (ENSSBOG00000024795)	AMOTL2 (ENSSBOG00000030616)	ENSSBOG00000031944	CEP63 (ENSSBOG00000031149)	KY (ENSSBOG00000033829)	EPHB1 (ENSSBOG00000021552)	ENSSBOG00000027208
Capuchin	MODERN SPECIES	30	SPSB4 (ENSCCAG00000032923)	PXYLP1 (ENSCCAG00000037463)	RASA2 (ENSCCAG00000037845) #9	RNF7 (ENSCCAG00000020264) #11	GRK7 (ENSCCAG00000025796)	ENSCCAG00000034843 #12	TFDP2 (ENSCCAG00000026731) #13	ENSCCAG00000032480	GK5 (ENSCCAG00000028734) #14	XRN1 (ENSCCAG00000034800) #15	ATR (ENSCCAG00000037606) #16	ENSCCAG00000002177 #18	TRPC1 (ENSCCAG00000034231) #19	PCOLCE2 (ENSCCAG00000033830) #20	PAQR9 (ENSCCAG00000029369)	U2SURP (ENSCCAG00000032530) #22	CHST2 (ENSCCAG00000020600) #23	SLC9A9 (ENSCCAG00000034947) #24	DIPK2A (ENSCCAG00000020146) #25	PLOD2 (ENSCCAG00000025733) #36	PLSCR4 (ENSCCAG00000022476) #37	ENSCCAG00000024980	PLSCR2 (ENSCCAG00000021427)	PLSCR1 (ENSCCAG00000033563)	PLSCR5 (ENSCCAG00000026895)	ENSCCAG00000034914	ZIC4 (ENSCCAG00000020073)	ZIC1 (ENSCCAG00000006506)	ENSCCAG00000020167	AGTR1 (ENSCCAG00000037143)	CPB1 (ENSCCAG00000030852)
Marmoset	MODERN SPECIES	8	ENSCJAG00000079923	ZBTB38 (ENSCJAG00000048397) #8	ENSCJAG00000076787	RASA2 (ENSCJAG00000001994) #9	ENSCJAG00000082838 #11	GRK7 (ENSCJAG00000001987)	ENSCJAG00000001981 #12	ENSCJAG00000001950 #13	GK5 (ENSCJAG00000001924) #14	XRN1 (ENSCJAG00000001872) #15	ATR (ENSCJAG00000001797) #16	PLS1 (ENSCJAG00000001762) #18	TRPC1 (ENSCJAG00000001739) #19	PCOLCE2 (ENSCJAG00000001714) #20	PAQR9 (ENSCJAG00000040620)	U2SURP (ENSCJAG00000001639) #22	ENSCJAG00000052027	SLC9A9 (ENSCJAG00000001617) #24	DIPK2A (ENSCJAG00000001605) #25	ENSCJAG00000078272	PLOD2 (ENSCJAG00000001578) #36	PLSCR4 (ENSCJAG00000041138) #37	ENSCJAG00000067351	PLSCR1 (ENSCJAG00000001542)	PLSCR5 (ENSCJAG00000001534)	ZIC4 (ENSCJAG00000001529)	ZIC1 (ENSCJAG00000047544)	ENSCJAG00000080507	ENSCJAG00000053621	AGTR1 (ENSCJAG00000001517)	CPB1 (ENSCJAG00000001510)
Mas night monkey	MODERN SPECIES	401	SPSB4 (ENSANAG00000033201)	ENSANAG00000025990	ZBTB38 (ENSANAG00000017076) #8	RASA2 (ENSANAG00000034912) #9	ENSANAG00000032669	ENSANAG00000028682 #11	GRK7 (ENSANAG00000034218)	ENSANAG00000031514 #12	TFDP2 (ENSANAG00000022473) #13	GK5 (ENSANAG00000028250) #14	XRN1 (ENSANAG00000029013) #15	ATR (ENSANAG00000025376) #16	PLS1 (ENSANAG00000033207) #18	TRPC1 (ENSANAG00000020387) #19	PCOLCE2 (ENSANAG00000033412) #20	U2SURP (ENSANAG00000035774) #22	CHST2 (ENSANAG00000015893) #23	SLC9A9 (ENSANAG00000020698) #24	DIPK2A (ENSANAG00000037040) #25	PLOD2 (ENSANAG00000030377) #36	PLSCR4 (ENSANAG00000003079) #37	ENSANAG00000030475	PLSCR1 (ENSANAG00000014304)	PLSCR5 (ENSANAG00000027235)	ZIC4 (ENSANAG00000036933)	ZIC1 (ENSANAG00000032455)	ENSANAG00000028319	ENSANAG00000029069	AGTR1 (ENSANAG00000022846)	CPB1 (ENSANAG00000036172)	CPA3 (ENSANAG00000035981)
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00910000147942	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00910000147942	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00910000147942	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.j	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Suina	ANCESTRAL SPECIES	1	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458
Pig	MODERN SPECIES	4	GRK7 (ENSSSCG00000011675)	ENSSSCG00000011676 #12	TFDP2 (ENSSSCG00000037647) #13	ENSSSCG00000036302	ENSSSCG00000058234	ENSSSCG00000048998	ENSSSCG00000034370	ENSSSCG00000046587	GK5 (ENSSSCG00000011677) #14	XRN1 (ENSSSCG00000011678) #15	ATR (ENSSSCG00000011679) #16	PLS1 (ENSSSCG00000011680) #18	TRPC1 (ENSSSCG00000011681) #19	PCOLCE2 (ENSSSCG00000011683) #20	PAQR9 (ENSSSCG00000060874)	U2SURP (ENSSSCG00000011684) #22	CHST2 (ENSSSCG00000022031) #23	SLC9A9 (ENSSSCG00000011686) #24	DIPK2A (ENSSSCG00000036206) #25	ENSSSCG00000011688	PLOD2 (ENSSSCG00000011689) #36	PLSCR4 (ENSSSCG00000011690) #37	PLSCR1 (ENSSSCG00000035634)	PLSCR5 (ENSSSCG00000011691)	ENSSSCG00000044934 ##31	ZIC4 (ENSSSCG00000011693)	ZIC1 (ENSSSCG00000011692)	ENSSSCG00000043038	AGTR1 (ENSSSCG00000011695)	CPB1 (ENSSSCG00000011694)	ENSSSCG00000040460
Chacoan peccary	MODERN SPECIES	944					RNF7 (ENSCWAG00000011696) #11	GRK7 (ENSCWAG00000011750)	ENSCWAG00000011803	TFDP2 (ENSCWAG00000011892) #13	GK5 (ENSCWAG00000012678) #14	XRN1 (ENSCWAG00000012884) #15	ATR (ENSCWAG00000013082) #16	PLS1 (ENSCWAG00000014000) #18	TRPC1 (ENSCWAG00000014130) #19	PCOLCE2 (ENSCWAG00000014366) #20	PAQR9 (ENSCWAG00000014421)	U2SURP (ENSCWAG00000014436) #22	CHST2 (ENSCWAG00000014501) #23	SLC9A9 (ENSCWAG00000014518) #24	DIPK2A (ENSCWAG00000014557) #25	ENSCWAG00000014638	PLOD2 (ENSCWAG00000014675) #36	PLSCR4 (ENSCWAG00000015062) #37	ENSCWAG00000015102 #37	ENSCWAG00000015142	PLSCR1 (ENSCWAG00000015196)	PLSCR5 (ENSCWAG00000015309)	ZIC4 (ENSCWAG00000015380)	ZIC1 (ENSCWAG00000015486)	ENSCWAG00000015525	AGTR1 (ENSCWAG00000015548)	CPB1 (ENSCWAG00000015586)
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.j.b.b	ENSGT00940000154435.j.b.a	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
Camelidae	ANCESTRAL SPECIES		ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.j.b.b	ENSGT00940000154435.j.b.a	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
Arabian camel	MODERN SPECIES		SLC25A36 (ENSCDRG00005008462)	SPSB4 (ENSCDRG00005008558)	PXYLP1 (ENSCDRG00005008608)	ZBTB38 (ENSCDRG00005008946) #8	RASA2 (ENSCDRG00005008964) #9	RNF7 (ENSCDRG00005009202) #11	GRK7 (ENSCDRG00005009268)	ATP1B3 (ENSCDRG00005009339) #12	TFDP2 (ENSCDRG00005009411) #13	GK5 (ENSCDRG00005009714) #14	XRN1 (ENSCDRG00005009918) #15	ATR (ENSCDRG00005010671) #16	PLS1 (ENSCDRG00005010969) #18	TRPC1 (ENSCDRG00005011182) #19	PCOLCE2 (ENSCDRG00005011354) #20	U2SURP (ENSCDRG00005012054) #22	CHST2 (ENSCDRG00005012377) #23	SLC9A9 (ENSCDRG00005012431) #24	DIPK2A (ENSCDRG00005012670) #25	ENSCDRG00005012746	ENSCDRG00005012769	PLOD2 (ENSCDRG00005012833) #36	PLSCR4 (ENSCDRG00005013103) #37	ENSCDRG00005013144	ENSCDRG00005013196	ENSCDRG00005013279	ENSCDRG00005013564	PLSCR5 (ENSCDRG00005013709)	ZIC4 (ENSCDRG00005013775)	ENSCDRG00005013834	AGTR1 (ENSCDRG00005013859)
Alpaca	MODERN SPECIES	1266				RASA2 (ENSVPAG00000004682) #9	RNF7 (ENSVPAG00000004683) #11	GRK7 (ENSVPAG00000004685)	ATP1B3 (ENSVPAG00000004686) #12	TFDP2 (ENSVPAG00000004687) #13	GK5 (ENSVPAG00000004688) #14	XRN1 (ENSVPAG00000004690) #15	ATR (ENSVPAG00000004691) #16	PLS1 (ENSVPAG00000004693) #18	TRPC1 (ENSVPAG00000004694) #19	PCOLCE2 (ENSVPAG00000004695) #20	PAQR9 (ENSVPAG00000004696)	U2SURP (ENSVPAG00000004697) #22	SLC9A9 (ENSVPAG00000004698) #24
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00990000212240	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.j.b.b	ENSGT00940000154435.j.b.a	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
Cetacea	ANCESTRAL SPECIES	10	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00990000212240	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT00930000151314.f	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.j.b.b	ENSGT00940000154435.j.b.a	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00990000212240	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT00930000151314.f	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00990000212240	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714.f #16	ENSGT00940000155714.e #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT00930000151314.f	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00510000049510.j	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714.f #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT00930000151314.f	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Monodontidae	ANCESTRAL SPECIES	23	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00510000049510.j	ENSGT00990000212240	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714.f #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT00930000151314.f	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Narwhal	MODERN SPECIES	297	ZBTB38 (ENSMMNG00015001678) #8	RASA2 (ENSMMNG00015001646) #9	RNF7 (ENSMMNG00015001619) #11	GRK7 (ENSMMNG00015001595)	ENSMMNG00015001573	ATP1B3 (ENSMMNG00015001546) #12	ENSMMNG00015001532	TFDP2 (ENSMMNG00015001329) #13	GK5 (ENSMMNG00015001246) #14	XRN1 (ENSMMNG00015001039) #15	ATR (ENSMMNG00015000820) #16	PLS1 (ENSMMNG00015000766) #18	TRPC1 (ENSMMNG00015000693) #19	PCOLCE2 (ENSMMNG00015000650) #20	PAQR9 (ENSMMNG00015000630)	U2SURP (ENSMMNG00015000545) #22	CHST2 (ENSMMNG00015000510) #23	ENSMMNG00015000492	SLC9A9 (ENSMMNG00015000475) #24	DIPK2A (ENSMMNG00015000433) #25	ENSMMNG00015000418	PLOD2 (ENSMMNG00015000282) #36	PLSCR4 (ENSMMNG00015000172) #37	PLSCR1 (ENSMMNG00015000121)	PLSCR5 (ENSMMNG00015000062)	ZIC4 (ENSMMNG00015004437)	ZIC1 (ENSMMNG00015004415)	AGTR1 (ENSMMNG00015004396)	CPB1 (ENSMMNG00015004361)	CPA3 (ENSMMNG00015004348)	GYG1 (ENSMMNG00015004320)
Beluga whale	MODERN SPECIES	18	ENSDLEG00000001540	RNF7 (ENSDLEG00000001551) #11	GRK7 (ENSDLEG00000001565)	ATP1B3 (ENSDLEG00000001587) #12	ENSDLEG00000001620	TFDP2 (ENSDLEG00000001700) #13	ENSDLEG00000002016	GK5 (ENSDLEG00000002054) #14	XRN1 (ENSDLEG00000002314) #15	ATR (ENSDLEG00000002842) #16	ENSDLEG00000002868 #16	PLS1 (ENSDLEG00000002877) #18	TRPC1 (ENSDLEG00000002901) #19	PCOLCE2 (ENSDLEG00000002981) #20	PAQR9 (ENSDLEG00000003008)	U2SURP (ENSDLEG00000003020) #22	CHST2 (ENSDLEG00000003050) #23	ENSDLEG00000003055	SLC9A9 (ENSDLEG00000003069) #24	CUNH3orf58 (ENSDLEG00000003079) #25	ENSDLEG00000003088	PLOD2 (ENSDLEG00000003108) #36	PLSCR4 (ENSDLEG00000003147) #37	PLSCR1 (ENSDLEG00000003167)	PLSCR5 (ENSDLEG00000003194)	ZIC4 (ENSDLEG00000003202)	ZIC1 (ENSDLEG00000003218)	AGTR1 (ENSDLEG00000003225)	CPB1 (ENSDLEG00000003229)	CPA3 (ENSDLEG00000003258)	GYG1 (ENSDLEG00000003273)
Vaquita	MODERN SPECIES	15	RASA2 (ENSPSNG00000007185) #9	RNF7 (ENSPSNG00000008117) #11	GRK7 (ENSPSNG00000008164)	ATP1B3 (ENSPSNG00000008203) #12	ENSPSNG00000008244	TFDP2 (ENSPSNG00000008314) #13	ENSPSNG00000008603	ENSPSNG00000008620	GK5 (ENSPSNG00000008649) #14	XRN1 (ENSPSNG00000008771) #15	ATR (ENSPSNG00000008915) #16	PLS1 (ENSPSNG00000008996) #18	TRPC1 (ENSPSNG00000009055) #19	PCOLCE2 (ENSPSNG00000009157) #20	PAQR9 (ENSPSNG00000009187)	ENSPSNG00000009448 #22	CHST2 (ENSPSNG00000011325) #23	ENSPSNG00000011340	SLC9A9 (ENSPSNG00000011399) #24	DIPK2A (ENSPSNG00000011433) #25	ENSPSNG00000011500	PLOD2 (ENSPSNG00000011568) #36	PLSCR4 (ENSPSNG00000011690) #37	PLSCR1 (ENSPSNG00000011787)	PLSCR5 (ENSPSNG00000011945)	ENSPSNG00000012040	ZIC4 (ENSPSNG00000012068)	ZIC1 (ENSPSNG00000012231)	AGTR1 (ENSPSNG00000012278)	CPB1 (ENSPSNG00000012386)	CPA3 (ENSPSNG00000012509)
Dolphin	MODERN SPECIES	5295																U2SURP (ENSTTRG00000017170) #22
Sperm whale	MODERN SPECIES		PXYLP1 (ENSPCTG00005000125)	ZBTB38 (ENSPCTG00005000124) #8	RASA2 (ENSPCTG00005000123) #9	RNF7 (ENSPCTG00005000121) #11	GRK7 (ENSPCTG00005000120)	ATP1B3 (ENSPCTG00005000118) #12	ENSPCTG00005000117	TFDP2 (ENSPCTG00005000116) #13	GK5 (ENSPCTG00005000115) #14	XRN1 (ENSPCTG00005000114) #15	ATR (ENSPCTG00005000113) #16	PLS1 (ENSPCTG00005000112) #18	TRPC1 (ENSPCTG00005000111) #19	PCOLCE2 (ENSPCTG00005000110) #20	PAQR9 (ENSPCTG00005000109)	U2SURP (ENSPCTG00005000108) #22	CHST2 (ENSPCTG00005000107) #23	SLC9A9 (ENSPCTG00005000106) #24	DIPK2A (ENSPCTG00005000105) #25	ENSPCTG00005000104	PLOD2 (ENSPCTG00005000102) #36	PLSCR4 (ENSPCTG00005000101) #37	ENSPCTG00005000100	ENSPCTG00005000099	ENSPCTG00005000098	ENSPCTG00005000097	PLSCR5 (ENSPCTG00005000096)	ENSPCTG00005000095	ZIC1 (ENSPCTG00005000094)	AGTR1 (ENSPCTG00005000093)	ENSPCTG00005000092
Blue whale	MODERN SPECIES	15	PXYLP1 (ENSBMSG00010002600)	ZBTB38 (ENSBMSG00010002653) #8	RASA2 (ENSBMSG00010002664) #9	RNF7 (ENSBMSG00010002685) #11	GRK7 (ENSBMSG00010002693)	ENSBMSG00010002711 #12	ENSBMSG00010002724	TFDP2 (ENSBMSG00010002750) #13	GK5 (ENSBMSG00010002815) #14	XRN1 (ENSBMSG00010002838) #15	ATR (ENSBMSG00010002907) #16	PLS1 (ENSBMSG00010002998) #18	TRPC1 (ENSBMSG00010003018) #19	PCOLCE2 (ENSBMSG00010003043) #20	PAQR9 (ENSBMSG00010003062)	U2SURP (ENSBMSG00010003077) #22	CHST2 (ENSBMSG00010003091) #23	ENSBMSG00010003096	SLC9A9 (ENSBMSG00010003106) #24	DIPK2A (ENSBMSG00010003121) #25	ENSBMSG00010003130	ENSBMSG00010003139	ENSBMSG00010003145	PLOD2 (ENSBMSG00010003166) #36	PLSCR4 (ENSBMSG00010003190) #37	ENSBMSG00010003203	ENSBMSG00010000039	ENSBMSG00010000055	ENSBMSG00010000106	PLSCR5 (ENSBMSG00010000196)	ZIC4 (ENSBMSG00010000237)
Pecora	ANCESTRAL SPECIES	8	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b.eb #12	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00990000212240	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.j.b.b	ENSGT00940000154435.j.b.a	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
Percora_a	ANCESTRAL SPECIES	7	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b.eb #12	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00990000212240	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.j.b.b	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Bovidae	ANCESTRAL SPECIES	9	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b.eb #12	ENSGT00910000147942.a	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.j.b.b	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Bovinae	ANCESTRAL SPECIES	6	ENSGT00940000158201 #9	ENSGT00940000171658.a	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b.eb #12	ENSGT00910000147942.a	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000153096.b.c.b.b.a.a.a.a.a.a.a	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.j.b.b	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Bos	ANCESTRAL SPECIES	7	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000171658.a	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT00910000147942.a	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000153096.b.c.b.b.a.a.a.a.a.a.a	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.j.b.b	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Bos_b	ANCESTRAL SPECIES	5	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b.eb #12	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000153096.b.c.b.b.a.a.a.a.a.a.a	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.j.b.b	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Hybrid Bos Indicus	MODERN SPECIES		RNF7 (ENSBIXG00005005297) #11	GRK7 (ENSBIXG00005029666)	ATP1B3 (ENSBIXG00005029659) #12	ENSBIXG00005029647	ENSBIXG00005029643	TFDP2 (ENSBIXG00005029603) #13	GK5 (ENSBIXG00005029572) #14	ENSBIXG00005029562	XRN1 (ENSBIXG00005029509) #15	ATR (ENSBIXG00005029438) #16	PLS1 (ENSBIXG00005029412) #18	TRPC1 (ENSBIXG00005029391) #19	PCOLCE2 (ENSBIXG00005029362) #20	ENSBIXG00005029331	PAQR9 (ENSBIXG00005029326)	U2SURP (ENSBIXG00005029299) #22	CHST2 (ENSBIXG00005029274) #23	SLC9A9 (ENSBIXG00005007868) #24	DIPK2A (ENSBIXG00005007900) #25	PLOD2 (ENSBIXG00005007973) #36	PLSCR4 (ENSBIXG00005000074) #37	ENSBIXG00005008057	ENSBIXG00005000107	ENSBIXG00005008090	ENSBIXG00005008135	ZIC4 (ENSBIXG00005008199)	ZIC1 (ENSBIXG00005008229)	AGTR1 (ENSBIXG00005008286)	CPB1 (ENSBIXG00005008300)	CPA3 (ENSBIXG00005008332)	GYG1 (ENSBIXG00005008398)
Cow	MODERN SPECIES		ZBTB38 (ENSBTAG00000040061) #8	RASA2 (ENSBTAG00000015413) #9	RNF7 (ENSBTAG00000002185) #11	GRK7 (ENSBTAG00000021886)	ATP1B3 (ENSBTAG00000014140) #12	ENSBTAG00000019007	TFDP2 (ENSBTAG00000006222) #13	GK5 (ENSBTAG00000018138) #14	XRN1 (ENSBTAG00000011524) #15	ATR (ENSBTAG00000011529) #16	PLS1 (ENSBTAG00000023429) #18	TRPC1 (ENSBTAG00000002232) #19	PCOLCE2 (ENSBTAG00000016026) #20	ENSBTAG00000038111	PAQR9 (ENSBTAG00000011116)	U2SURP (ENSBTAG00000009154) #22	CHST2 (ENSBTAG00000011584) #23	ENSBTAG00000054067 ##31	SLC9A9 (ENSBTAG00000031178) #24	DIPK2A (ENSBTAG00000007933) #25	ENSBTAG00000049240 ##31	PLOD2 (ENSBTAG00000007331) #36	PLSCR4 (ENSBTAG00000011986) #37	PLSCR1 (ENSBTAG00000031306)	ENSBTAG00000054268	PLSCR2 (ENSBTAG00000022227)	PLSCR5 (ENSBTAG00000005522)	ENSBTAG00000053400	ZIC4 (ENSBTAG00000014749)	ZIC1 (ENSBTAG00000014751)	AGTR1 (ENSBTAG00000045633)
Bos_a	ANCESTRAL SPECIES	5	ENSGT00940000158201 #9	ENSGT00940000171658.a	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b.eb #12	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000153096.b.c.b.b.a.a.a.a.a.a.a	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.j.b.b	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Domestic yak	MODERN SPECIES		PXYLP1 (ENSBGRG00000001263)	ZBTB38 (ENSBGRG00000001246) #8	RASA2 (ENSBGRG00000001166) #9	RNF7 (ENSBGRG00000001134) #11	GRK7 (ENSBGRG00000001107)	ATP1B3 (ENSBGRG00000001064) #12	ENSBGRG00000001057	TFDP2 (ENSBGRG00000001010) #13	GK5 (ENSBGRG00000000970) #14	XRN1 (ENSBGRG00000000705) #15	ATR (ENSBGRG00000000428) #16	PLS1 (ENSBGRG00000000350) #18	TRPC1 (ENSBGRG00000000286) #19	PCOLCE2 (ENSBGRG00000000254) #20	PAQR9 (ENSBGRG00000000229)	U2SURP (ENSBGRG00000000223) #22	CHST2 (ENSBGRG00000000218) #23	ENSBGRG00000000212	ENSBGRG00000000206	SLC9A9 (ENSBGRG00000000195) #24	DIPK2A (ENSBGRG00000000180) #25	ENSBGRG00000000169 ##31	PLOD2 (ENSBGRG00000020444) #36	ENSBGRG00000020343 #37	ENSBGRG00000020292 #37	ENSBGRG00000020218	ENSBGRG00000020190	ENSBGRG00000020009	ENSBGRG00000019984	PLSCR5 (ENSBGRG00000019884)	ENSBGRG00000019852
Wild yak	MODERN SPECIES	182	RASA2 (ENSBMUG00000020801) #9	ENSBMUG00000020763	RNF7 (ENSBMUG00000020720) #11	GRK7 (ENSBMUG00000020702)	ENSBMUG00000020679	ENSBMUG00000020675	TFDP2 (ENSBMUG00000020653) #13	GK5 (ENSBMUG00000020565) #14	XRN1 (ENSBMUG00000020548) #15	ATR (ENSBMUG00000020470) #16	PLS1 (ENSBMUG00000020434) #18	TRPC1 (ENSBMUG00000020407) #19	PCOLCE2 (ENSBMUG00000020376) #20	ENSBMUG00000020362	PAQR9 (ENSBMUG00000020355)	U2SURP (ENSBMUG00000020347) #22	CHST2 (ENSBMUG00000020326) #23	SLC9A9 (ENSBMUG00000020313) #24
American bison	MODERN SPECIES	3298	ENSBBBG00000016540	RNF7 (ENSBBBG00000004080) #11	GRK7 (ENSBBBG00000016561)	ATP1B3 (ENSBBBG00000016573) #12	ENSBBBG00000016579	ENSBBBG00000004088	TFDP2 (ENSBBBG00000016664) #13	GK5 (ENSBBBG00000016698) #14	XRN1 (ENSBBBG00000009064) #15	ATR (ENSBBBG00000008122) #16	PLS1 (ENSBBBG00000017029) #18	TRPC1 (ENSBBBG00000008340) #19	PCOLCE2 (ENSBBBG00000017158) #20	ENSBBBG00000017165	PAQR9 (ENSBBBG00000004249)	U2SURP (ENSBBBG00000017226) #22	CHST2 (ENSBBBG00000017229) #23	SLC9A9 (ENSBBBG00000017251) #24	DIPK2A (ENSBBBG00000017267) #25	ENSBBBG00000007570	PLOD2 (ENSBBBG00000004314) #36	PLSCR4 (ENSBBBG00000017501) #37	ENSBBBG00000004337	PLSCR1 (ENSBBBG00000017546)	PLSCR5 (ENSBBBG00000017562)	ZIC4 (ENSBBBG00000007949)	ZIC1 (ENSBBBG00000017580)	ENSBBBG00000017587	ENSBBBG00000007463	AGTR1 (ENSBBBG00000007578)	CPB1 (ENSBBBG00000017637)
Caprinae	ANCESTRAL SPECIES	8	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b.eb.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.i	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Goat	MODERN SPECIES		PXYLP1 (ENSCHIG00000025350)	ZBTB38 (ENSCHIG00000010094) #8	RASA2 (ENSCHIG00000002573) #9	RNF7 (ENSCHIG00000013336) #11	GRK7 (ENSCHIG00000012094)	ENSCHIG00000027094 #12	ENSCHIG00000017443	TFDP2 (ENSCHIG00000009621) #13	GK5 (ENSCHIG00000017817) #14	XRN1 (ENSCHIG00000019192) #15	ATR (ENSCHIG00000021916) #16	PLS1 (ENSCHIG00000007676) #18	TRPC1 (ENSCHIG00000020690) #19	PCOLCE2 (ENSCHIG00000024199) #20	PAQR9 (ENSCHIG00000009825)	U2SURP (ENSCHIG00000023892) #22	CHST2 (ENSCHIG00000010707) #23	SLC9A9 (ENSCHIG00000013168) #24	DIPK2A (ENSCHIG00000018908) #25	PLOD2 (ENSCHIG00000018266) #36	PLSCR4 (ENSCHIG00000022873) #37	ENSCHIG00000010958	PLSCR1 (ENSCHIG00000025945)	PLSCR5 (ENSCHIG00000013997)	ZIC4 (ENSCHIG00000023352)	ZIC1 (ENSCHIG00000027149)	ENSCHIG00000014985	ENSCHIG00000014987	AGTR1 (ENSCHIG00000011470)	CPB1 (ENSCHIG00000006800)	CPA3 (ENSCHIG00000011174)
Rambouillet Sheep	MODERN SPECIES		RNF7 (ENSOARG00020008414) #11	GRK7 (ENSOARG00020008372)	ATP1B3 (ENSOARG00020008329) #12	ENSOARG00020008278	ENSOARG00020008237	TFDP2 (ENSOARG00020007870) #13	ENSOARG00020007831	GK5 (ENSOARG00020007690) #14	XRN1 (ENSOARG00020007309) #15	ATR (ENSOARG00020006427) #16	ENSOARG00020006395	PLS1 (ENSOARG00020006303) #18	TRPC1 (ENSOARG00020006181) #19	PCOLCE2 (ENSOARG00020006072) #20	PAQR9 (ENSOARG00020006055)	U2SURP (ENSOARG00020005741) #22	CHST2 (ENSOARG00020005718) #23	SLC9A9 (ENSOARG00020005671) #24	DIPK2A (ENSOARG00020005642) #25	PLOD2 (ENSOARG00020005484) #36	PLSCR4 (ENSOARG00020005420) #37	ENSOARG00020005372	PLSCR1 (ENSOARG00020005334)	PLSCR5 (ENSOARG00020005312)	ENSOARG00020006040	ENSOARG00020006026	ZIC1 (ENSOARG00020005847)	ENSOARG00020005798	AGTR1 (ENSOARG00020005782)	CPB1 (ENSOARG00020005735)	CPA3 (ENSOARG00020005710)
Siberian musk deer	MODERN SPECIES	1183	PXYLP1 (ENSMMSG00000006978)	RASA2 (ENSMMSG00000006905) #9	RNF7 (ENSMMSG00000006837) #11	GRK7 (ENSMMSG00000006798)	ENSMMSG00000006771 #12	ENSMMSG00000006756	ENSMMSG00000006733	TFDP2 (ENSMMSG00000006589) #13	GK5 (ENSMMSG00000006474) #14	XRN1 (ENSMMSG00000006235) #15	ATR (ENSMMSG00000006162) #16	PLS1 (ENSMMSG00000006112) #18	TRPC1 (ENSMMSG00000006046) #19	PCOLCE2 (ENSMMSG00000005995) #20	PAQR9 (ENSMMSG00000005982)	U2SURP (ENSMMSG00000005820) #22	CHST2 (ENSMMSG00000005775) #23	SLC9A9 (ENSMMSG00000005673) #24	DIPK2A (ENSMMSG00000005617) #25	PLOD2 (ENSMMSG00000005367) #36	PLSCR4 (ENSMMSG00000005249) #37	ENSMMSG00000005202	ENSMMSG00000005158	PLSCR1 (ENSMMSG00000005107)	PLSCR5 (ENSMMSG00000005079)	ZIC4 (ENSMMSG00000005028)	ZIC1 (ENSMMSG00000004996)	ENSMMSG00000004963	AGTR1 (ENSMMSG00000004940)	CPB1 (ENSMMSG00000004897)	CPA3 (ENSMMSG00000004845)
Yarkand deer	MODERN SPECIES	10	ZBTB38 (ENSCHYG00000024909) #8	RASA2 (ENSCHYG00000024595) #9	RNF7 (ENSCHYG00000024540) #11	GRK7 (ENSCHYG00000024502)	ENSCHYG00000024452 #12	ENSCHYG00000024429	ENSCHYG00000024409	TFDP2 (ENSCHYG00000024201) #13	GK5 (ENSCHYG00000024077) #14	XRN1 (ENSCHYG00000023362) #15	ATR (ENSCHYG00000022692) #16	PLS1 (ENSCHYG00000022526) #18	TRPC1 (ENSCHYG00000022264) #19	PCOLCE2 (ENSCHYG00000022135) #20	PAQR9 (ENSCHYG00000022114)	U2SURP (ENSCHYG00000021811) #22	CHST2 (ENSCHYG00000021770) #23	SLC9A9 (ENSCHYG00000021601) #24	DIPK2A (ENSCHYG00000021529) #25	ENSCHYG00000021484	ENSCHYG00000021457	PLOD2 (ENSCHYG00000020638) #36	ENSCHYG00000020380 #37	ENSCHYG00000020311
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Carnivora	ANCESTRAL SPECIES	10	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00950000185592	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Caniformia	ANCESTRAL SPECIES		ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00950000185592	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Caniformia_b	ANCESTRAL SPECIES		ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00950000185592	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Ursidae	ANCESTRAL SPECIES	1	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00950000185592	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Giant Panda	MODERN SPECIES	16	PXYLP1 (ENSAMEG00000016481)	ZBTB38 (ENSAMEG00000019668) #8	RASA2 (ENSAMEG00000016471) #9	RNF7 (ENSAMEG00000029757) #11	GRK7 (ENSAMEG00000012428)	ENSAMEG00000028514	ATP1B3 (ENSAMEG00000012443) #12	TFDP2 (ENSAMEG00000012466) #13	GK5 (ENSAMEG00000012501) #14	XRN1 (ENSAMEG00000012538) #15	ATR (ENSAMEG00000012578) #16	PLS1 (ENSAMEG00000012619) #18	TRPC1 (ENSAMEG00000012683) #19	PCOLCE2 (ENSAMEG00000012725) #20	PAQR9 (ENSAMEG00000012752)	U2SURP (ENSAMEG00000012757) #22	CHST2 (ENSAMEG00000024314) #23	SLC9A9 (ENSAMEG00000012796) #24	DIPK2A (ENSAMEG00000012804) #25	PLOD2 (ENSAMEG00000013650) #36	ENSAMEG00000013629 #37	ENSAMEG00000026607	PLSCR1 (ENSAMEG00000002079)	PLSCR5 (ENSAMEG00000002120)	ZIC4 (ENSAMEG00000002144)	ZIC1 (ENSAMEG00000002149)	ENSAMEG00000023619	AGTR1 (ENSAMEG00000019288)	CPA3 (ENSAMEG00000010873)	GYG1 (ENSAMEG00000010890)	HLTF (ENSAMEG00000010901)
Ursus	ANCESTRAL SPECIES	14	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00950000185592	ENSGT00940000161947 #37	ENSGT00530000063516.a.a.d	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551
American black bear	MODERN SPECIES	849															PAQR9 (ENSUAMG00000028284)	U2SURP (ENSUAMG00000028259) #22	CHST2 (ENSUAMG00000028258) #23
Mustelinae	ANCESTRAL SPECIES	59	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674.m	ENSGT00910000144305
American mink	MODERN SPECIES	201	ZBTB38 (ENSNVIG00000013906) #8	ENSNVIG00000013900	RASA2 (ENSNVIG00000013822) #9	RBX2 (ENSNVIG00000013786) #11	GRK7 (ENSNVIG00000013769)	ENSNVIG00000013754	ENSNVIG00000013749	TFDP2 (ENSNVIG00000013598) #13	GK5 (ENSNVIG00000013575) #14	XRN1 (ENSNVIG00000013389) #15	ATR (ENSNVIG00000013314) #16	PLS1 (ENSNVIG00000013238) #18	TRPC1 (ENSNVIG00000013187) #19	PCOLCE2 (ENSNVIG00000013129) #20	PAQR9 (ENSNVIG00000013125)	U2SURP (ENSNVIG00000013061) #22	CHST2 (ENSNVIG00000013045) #23	SLC9A9 (ENSNVIG00000013014) #24	ENSNVIG00000013003	DIPK2A (ENSNVIG00000012994) #25
Ferret	MODERN SPECIES	207	HEPHL1 (ENSMPUG00000012234)	ZBTB38 (ENSMPUG00000019344) #8	RASA2 (ENSMPUG00000012228) #9	RNF7 (ENSMPUG00000012222) #11	ENSMPUG00000012217	GRK7 (ENSMPUG00000012168)	ATP1B3 (ENSMPUG00000012165) #12	TFDP2 (ENSMPUG00000012159) #13	GK5 (ENSMPUG00000012150) #14	XRN1 (ENSMPUG00000012040) #15	ATR (ENSMPUG00000012022) #16	PLS1 (ENSMPUG00000011881) #18	TRPC1 (ENSMPUG00000011873) #19	PCOLCE2 (ENSMPUG00000011868) #20	PAQR9 (ENSMPUG00000019343)	U2SURP (ENSMPUG00000011855) #22	CHST2 (ENSMPUG00000019342) #23	SLC9A9 (ENSMPUG00000011846) #24	DIPK2A (ENSMPUG00000011840) #25	ENSMPUG00000011834	PLOD2 (ENSMPUG00000011826) #36	PLSCR4 (ENSMPUG00000011821) #37	ENSMPUG00000011813	PLSCR1 (ENSMPUG00000011806)	ENSMPUG00000011801	PLSCR5 (ENSMPUG00000011793)	ENSMPUG00000011771	ZIC4 (ENSMPUG00000011767)	ZIC1 (ENSMPUG00000011764)	ENSMPUG00000011741	AGTR1 (ENSMPUG00000019341)
Canidae	ANCESTRAL SPECIES	24	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Canis_lupus	ANCESTRAL SPECIES	27	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00950000185721	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00980000200423	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Dog	MODERN SPECIES	15	ZBTB38 (ENSCAFG00845028009) #8	RASA2 (ENSCAFG00845028112) #9	ENSCAFG00845028197	ENSCAFG00845028212 #11	GRK7 (ENSCAFG00845028236)	ATP1B3 (ENSCAFG00845028285) #12	TFDP2 (ENSCAFG00845028411) #13	GK5 (ENSCAFG00845028559) #14	XRN1 (ENSCAFG00845028618) #15	ATR (ENSCAFG00845028753) #16	ENSCAFG00845028887	PLS1 (ENSCAFG00845028912) #18	TRPC1 (ENSCAFG00845028972) #19	PCOLCE2 (ENSCAFG00845029069) #20	PAQR9 (ENSCAFG00845029107)	U2SURP (ENSCAFG00845029146) #22	CHST2 (ENSCAFG00845029239) #23	SLC9A9 (ENSCAFG00845029260) #24	DIPK2A (ENSCAFG00845019923) #25	ENSCAFG00845019990	ENSCAFG00845020135	ENSCAFG00845020319	PLOD2 (ENSCAFG00845020429) #36	PLSCR4 (ENSCAFG00845020987) #37	ENSCAFG00845021095	PLSCR1 (ENSCAFG00845021201)	PLSCR5 (ENSCAFG00845021401)	ENSCAFG00845021640	ZIC4 (ENSCAFG00845021719)	ZIC1 (ENSCAFG00845021895)	AGTR1 (ENSCAFG00845022234)
Dingo	MODERN SPECIES	80	ZBTB38 (ENSCAFG00020008519) #8	RASA2 (ENSCAFG00020008540) #9	ENSCAFG00020008615	ENSCAFG00020008621 #11	GRK7 (ENSCAFG00020008625)	ATP1B3 (ENSCAFG00020008628) #12	TFDP2 (ENSCAFG00020008640) #13	GK5 (ENSCAFG00020008666) #14	XRN1 (ENSCAFG00020009120) #15	ATR (ENSCAFG00020009248) #16	ENSCAFG00020009852	PLS1 (ENSCAFG00020009887) #18	TRPC1 (ENSCAFG00020010411) #19	PCOLCE2 (ENSCAFG00020010443) #20	PAQR9 (ENSCAFG00020010463)	U2SURP (ENSCAFG00020010497) #22	CHST2 (ENSCAFG00020011451) #23	SLC9A9 (ENSCAFG00020011470) #24	DIPK2A (ENSCAFG00020011532) #25	ENSCAFG00020011537	ENSCAFG00020011539	PLOD2 (ENSCAFG00020011739) #36	PLSCR4 (ENSCAFG00020018835) #37	ENSCAFG00020018841	PLSCR1 (ENSCAFG00020018849)	PLSCR5 (ENSCAFG00020018852)	ENSCAFG00020018869	ZIC4 (ENSCAFG00020018878)	ZIC1 (ENSCAFG00020018881)	AGTR1 (ENSCAFG00020018902)	CPB1 (ENSCAFG00020018903)
Red fox	MODERN SPECIES	154	ENSVVUG00000026242	ZBTB38 (ENSVVUG00000026241) #8	ENSVVUG00000026240	RASA2 (ENSVVUG00000026237) #9	RNF7 (ENSVVUG00000026234) #11	GRK7 (ENSVVUG00000026233)	ATP1B3 (ENSVVUG00000026231) #12	TFDP2 (ENSVVUG00000026228) #13	GK5 (ENSVVUG00000026188) #14	XRN1 (ENSVVUG00000024461) #15	ATR (ENSVVUG00000024124) #16	PLS1 (ENSVVUG00000021572) #18	TRPC1 (ENSVVUG00000021513) #19	PCOLCE2 (ENSVVUG00000021509) #20	PAQR9 (ENSVVUG00000021505)	U2SURP (ENSVVUG00000021495) #22	CHST2 (ENSVVUG00000021493) #23
Felidae	ANCESTRAL SPECIES	9	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00950000185592	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.e	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Panthera	ANCESTRAL SPECIES	12	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00950000185592	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.e	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
Panthera_a	ANCESTRAL SPECIES	17	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT00940000156502.e.b	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00950000185592	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435.e	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674
leopard	MODERN SPECIES	5	PXYLP1 (ENSPPRG00000013368)	ZBTB38 (ENSPPRG00000015363) #8	RASA2 (ENSPPRG00000012757) #9	RNF7 (ENSPPRG00000010875) #11	GRK7 (ENSPPRG00000010184)	ATP1B3 (ENSPPRG00000009308) #12	TFDP2 (ENSPPRG00000008909) #13	ENSPPRG00000015257	GK5 (ENSPPRG00000007419) #14	XRN1 (ENSPPRG00000007125) #15	ATR (ENSPPRG00000003180) #16	PLS1 (ENSPPRG00000002354) #18	TRPC1 (ENSPPRG00000000533) #19	PCOLCE2 (ENSPPRG00000000105) #20	PAQR9 (ENSPPRG00000015091)	U2SURP (ENSPPRG00000022258) #22	SLC9A9 (ENSPPRG00000013496) #24	DIPK2A (ENSPPRG00000012546) #25	PLOD2 (ENSPPRG00000012277) #36	PLSCR4 (ENSPPRG00000011790) #37	ENSPPRG00000010848	ENSPPRG00000010322	PLSCR5 (ENSPPRG00000009681)	ZIC4 (ENSPPRG00000008986)	ZIC1 (ENSPPRG00000008236)	AGTR1 (ENSPPRG00000014998)	CPB1 (ENSPPRG00000007735)	CPA3 (ENSPPRG00000007497)	GYG1 (ENSPPRG00000007281)	HLTF (ENSPPRG00000006271)	HPS3 (ENSPPRG00000002181)
lion	MODERN SPECIES	9	ZBTB38 (ENSPLOG00000014693) #8	RASA2 (ENSPLOG00000014718) #9	RNF7 (ENSPLOG00000014770) #11	GRK7 (ENSPLOG00000014829)	ATP1B3 (ENSPLOG00000014889) #12	TFDP2 (ENSPLOG00000014941) #13	ENSPLOG00000015088	ENSPLOG00000015121	GK5 (ENSPLOG00000015158) #14	XRN1 (ENSPLOG00000015299) #15	ATR (ENSPLOG00000015412) #16	PLS1 (ENSPLOG00000015495) #18	TRPC1 (ENSPLOG00000015566) #19	PCOLCE2 (ENSPLOG00000015762) #20	PAQR9 (ENSPLOG00000015819)	U2SURP (ENSPLOG00000015841) #22	CHST2 (ENSPLOG00000015901) #23	SLC9A9 (ENSPLOG00000015913) #24	DIPK2A (ENSPLOG00000015954) #25	PLOD2 (ENSPLOG00000016066) #36	ENSPLOG00000016613	PLSCR4 (ENSPLOG00000016649) #37	ENSPLOG00000016771	ENSPLOG00000016871	PLSCR5 (ENSPLOG00000017085)	ZIC4 (ENSPLOG00000017156)	ZIC1 (ENSPLOG00000017247)	ENSPLOG00000017298	AGTR1 (ENSPLOG00000017325)	CPB1 (ENSPLOG00000017370)	CPA3 (ENSPLOG00000017467)
Tiger	MODERN SPECIES	242	SPSB4 (ENSPTIG00000015447)	PXYLP1 (ENSPTIG00000013939)	ZBTB38 (ENSPTIG00000005500) #8	RASA2 (ENSPTIG00000010804) #9	RNF7 (ENSPTIG00000010047) #11	GRK7 (ENSPTIG00000009733)	ENSPTIG00000009651	ENSPTIG00000005462	TFDP2 (ENSPTIG00000006460) #13	GK5 (ENSPTIG00000005036) #14	XRN1 (ENSPTIG00000021081) #15	ATR (ENSPTIG00000018572) #16	PLS1 (ENSPTIG00000014589) #18	TRPC1 (ENSPTIG00000009946) #19	PCOLCE2 (ENSPTIG00000009436) #20	U2SURP (ENSPTIG00000001167) #22	CHST2 (ENSPTIG00000005139) #23	SLC9A9 (ENSPTIG00000020998) #24	ENSPTIG00000020674 #25	PLOD2 (ENSPTIG00000018891) #36	PLSCR4 (ENSPTIG00000017081) #37	ENSPTIG00000016702	ENSPTIG00000015040	PLSCR5 (ENSPTIG00000014021)	ZIC4 (ENSPTIG00000012876)	ZIC1 (ENSPTIG00000012490)	AGTR1 (ENSPTIG00000011825)	CPB1 (ENSPTIG00000011527)	CPA3 (ENSPTIG00000010908)	GYG1 (ENSPTIG00000007857)	HLTF (ENSPTIG00000020394)
Cat	MODERN SPECIES	240	RASA2 (ENSFCAG00000002561) #9	RNF7 (ENSFCAG00000037838) #11	GRK7 (ENSFCAG00000010128)	ATP1B3 (ENSFCAG00000030431) #12	ENSFCAG00000028193	ENSFCAG00000048032	TFDP2 (ENSFCAG00000003086) #13	GK5 (ENSFCAG00000003088) #14	XRN1 (ENSFCAG00000027589) #15	ATR (ENSFCAG00000018078) #16	PLS1 (ENSFCAG00000030454) #18	TRPC1 (ENSFCAG00000022271) #19	PCOLCE2 (ENSFCAG00000001007) #20	PAQR9 (ENSFCAG00000024035)	CHST2 (ENSFCAG00000022945) #23	U2SURP (ENSFCAG00000012186) #22	SLC9A9 (ENSFCAG00000009297) #24	DIPK2A (ENSFCAG00000023927) #25	ENSFCAG00000033064	PLOD2 (ENSFCAG00000023549) #36	ENSFCAG00000053114	PLSCR4 (ENSFCAG00000045073) #37	ENSFCAG00000037637	ENSFCAG00000027005	PLSCR5 (ENSFCAG00000024711)	ZIC4 (ENSFCAG00000007059)	ZIC1 (ENSFCAG00000007061)	AGTR1 (ENSFCAG00000000717)	CPB1 (ENSFCAG00000000222)	CPA3 (ENSFCAG00000022469)	GYG1 (ENSFCAG00000007859)
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458
Equus	ANCESTRAL SPECIES	5	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT00940000166511	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Donkey	MODERN SPECIES	13	PXYLP1 (ENSEASG00005024376)	ZBTB38 (ENSEASG00005038051) #8	RASA2 (ENSEASG00005003659) #9	ENSEASG00005027864 #11	GRK7 (ENSEASG00005003655)	ATP1B3 (ENSEASG00005003651) #12	ENSEASG00005003649	TFDP2 (ENSEASG00005003645) #13	GK5 (ENSEASG00005003607) #14	XRN1 (ENSEASG00005002687) #15	ATR (ENSEASG00005002097) #16	PLS1 (ENSEASG00005000633) #18	TRPC1 (ENSEASG00005000262) #19	PCOLCE2 (ENSEASG00005000245) #20	PAQR9 (ENSEASG00005000232)	U2SURP (ENSEASG00005000213) #22	CHST2 (ENSEASG00005024234) #23	SLC9A9 (ENSEASG00005000191) #24	DIPK2A (ENSEASG00005000184) #25	PLOD2 (ENSEASG00005000164) #36	PLSCR4 (ENSEASG00005000022) #37	PLSCR1 (ENSEASG00005030899)	PLSCR5 (ENSEASG00005021862)	ZIC4 (ENSEASG00005031952)	ZIC1 (ENSEASG00005021859)	ENSEASG00005021856	AGTR1 (ENSEASG00005024073)	CPB1 (ENSEASG00005021850)	CPA3 (ENSEASG00005021848)	GYG1 (ENSEASG00005021841)	HLTF (ENSEASG00005021834)
Horse	MODERN SPECIES	7	PXYLP1 (ENSECAG00000010807)	ZBTB38 (ENSECAG00000010836) #8	RASA2 (ENSECAG00000010845) #9	RNF7 (ENSECAG00000026883) #11	GRK7 (ENSECAG00000018719)	ATP1B3 (ENSECAG00000019885) #12	TFDP2 (ENSECAG00000021725) #13	GK5 (ENSECAG00000045044) #14	ENSECAG00000055509	XRN1 (ENSECAG00000056093) #15	ATR (ENSECAG00000013285) #16	PLS1 (ENSECAG00000014408) #18	TRPC1 (ENSECAG00000018048) #19	PCOLCE2 (ENSECAG00000020485) #20	PAQR9 (ENSECAG00000021863)	U2SURP (ENSECAG00000022460) #22	CHST2 (ENSECAG00000000982) #23	SLC9A9 (ENSECAG00000006450) #24	DIPK2A (ENSECAG00000009060) #25	ENSECAG00000054798	PLOD2 (ENSECAG00000009297) #36	PLSCR4 (ENSECAG00000060330) #37	PLSCR1 (ENSECAG00000017295)	PLSCR5 (ENSECAG00000019663)	ZIC4 (ENSECAG00000020070)	ZIC1 (ENSECAG00000020355)	ENSECAG00000053335	AGTR1 (ENSECAG00000001279)	CPB1 (ENSECAG00000021384)	CPA3 (ENSECAG00000033607)	GYG1 (ENSECAG00000023192)
Chiroptera	ANCESTRAL SPECIES	68									ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b.b #36	ENSGT00940000161947 #37	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458
Megabat	MODERN SPECIES	1841																U2SURP (ENSPVAG00000016077) #22
Microchiroptera	ANCESTRAL SPECIES	11		ENSGT00390000008330	ENSGT00940000157312	ENSGT00940000156915	ENSGT00390000009491.d	ENSGT00940000156308	ENSGT00940000156047	ENSGT00940000158523	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b.b #36	ENSGT00940000161947 #37	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458
Microbat	DUPLICATION
Microbat	MODERN SPECIES	958	ENSMLUG00000026848	ACAD9 (ENSMLUG00000017155)	IQSEC1 (ENSMLUG00000001338)	NUP210 (ENSMLUG00000008874)	HDAC11 (ENSMLUG00000017293)	FBLN2 (ENSMLUG00000007277)	WNT7A (ENSMLUG00000015639)	GK5 (ENSMLUG00000022492) #14	XRN1 (ENSMLUG00000016885) #15	ATR (ENSMLUG00000016908) #16	PLS1 (ENSMLUG00000006680) #18	TRPC1 (ENSMLUG00000014535) #19	ENSMLUG00000029109	PCOLCE2 (ENSMLUG00000008514) #20	PAQR9 (ENSMLUG00000002919)	ENSMLUG00000002920 #22	CHST2 (ENSMLUG00000017249) #23	ENSMLUG00000006765	SLC9A9 (ENSMLUG00000014324) #24	ENSMLUG00000029377	DIPK2A (ENSMLUG00000002662) #25
Microbat	MODERN SPECIES	985													ENSMLUG00000004561	DTHD1 (ENSMLUG00000000431)	ENSMLUG00000008439	ENSMLUG00000014633 #22	ENSMLUG00000027308	NWD2 (ENSMLUG00000001118)	C4orf19 (ENSMLUG00000001135)	RELL1 (ENSMLUG00000028499)	PGM2 (ENSMLUG00000008472)	TBC1D1 (ENSMLUG00000004239)	KLF3 (ENSMLUG00000008403)	TLR1 (ENSMLUG00000008417)	TLR6 (ENSMLUG00000008430)	FAM114A1 (ENSMLUG00000008436)	TMEM156 (ENSMLUG00000000296)	KLHL5 (ENSMLUG00000011840)	WDR19 (ENSMLUG00000010928)	RFC1 (ENSMLUG00000013981)	KLB (ENSMLUG00000004592)
Greater horseshoe bat	MODERN SPECIES	11	ACAD9 (ENSRFEG00010004679)	IQSEC1 (ENSRFEG00010004769)	ENSRFEG00010004850	NUP210 (ENSRFEG00010004861)	ENSRFEG00010004889	ENSRFEG00010004894	FBLN2 (ENSRFEG00010004908)	WNT7A (ENSRFEG00010004927)	GK5 (ENSRFEG00010004962) #14	XRN1 (ENSRFEG00010004992) #15	ATR (ENSRFEG00010005072) #16	PLS1 (ENSRFEG00010005106) #18	TRPC1 (ENSRFEG00010005127) #19	PCOLCE2 (ENSRFEG00010005148) #20	PAQR9 (ENSRFEG00010005166)	U2SURP (ENSRFEG00010005180) #22	ENSRFEG00010005199	CHST2 (ENSRFEG00010005206) #23	SLC9A9 (ENSRFEG00010005221) #24	DIPK2A (ENSRFEG00010005250) #25	ENSRFEG00010005260	PLOD2 (ENSRFEG00010005288) #36	PLSCR4 (ENSRFEG00010005346) #37	ENSRFEG00010005376	PLSCR1 (ENSRFEG00010005408)	PLSCR5 (ENSRFEG00010005460)	ZIC4 (ENSRFEG00010005534)	ZIC1 (ENSRFEG00010005593)	ENSRFEG00010005605	AGTR1 (ENSRFEG00010005628)	CPB1 (ENSRFEG00010005647)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000010687.a.a #22
Common shrew	MODERN SPECIES	4393																U2SURP (ENSSARG00000013779) #22
Hedgehog	MODERN SPECIES	5646																U2SURP (ENSEEUG00000013553) #22
Atlantogenata	ANCESTRAL SPECIES	45	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Afrotheria	ANCESTRAL SPECIES	59	ENSGT00530000064220	ENSGT00940000154369	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Afrotheria_a	ANCESTRAL SPECIES	57	ENSGT00530000064220	ENSGT00940000154369	ENSGT01030000234629.C	ENSGT00390000016324	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947 #37	ENSGT00940000164931	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Elephant	MODERN SPECIES	383	TRIM42 (ENSLAFG00000008928)	SLC25A36 (ENSLAFG00000001428)	SPSB4 (ENSLAFG00000004961)	PXYLP1 (ENSLAFG00000010318)	RASA2 (ENSLAFG00000004893) #9	RNF7 (ENSLAFG00000005263) #11	GRK7 (ENSLAFG00000005265)	ATP1B3 (ENSLAFG00000010553) #12	TFDP2 (ENSLAFG00000010557) #13	GK5 (ENSLAFG00000008661) #14	XRN1 (ENSLAFG00000015426) #15	ATR (ENSLAFG00000015442) #16	PLS1 (ENSLAFG00000008746) #18	TRPC1 (ENSLAFG00000004282) #19	PCOLCE2 (ENSLAFG00000004287) #20	U2SURP (ENSLAFG00000002566) #22	CHST2 (ENSLAFG00000001355) #23	SLC9A9 (ENSLAFG00000000863) #24	DIPK2A (ENSLAFG00000004615) #25	ENSLAFG00000003009	PLOD2 (ENSLAFG00000001931) #36	PLSCR4 (ENSLAFG00000013908) #37	ENSLAFG00000027441	PLSCR1 (ENSLAFG00000016401)	PLSCR5 (ENSLAFG00000026690)	ZIC4 (ENSLAFG00000010922)	ZIC1 (ENSLAFG00000030632)	AGTR1 (ENSLAFG00000004852)	CPB1 (ENSLAFG00000004854)	CPA3 (ENSLAFG00000004858)	GYG1 (ENSLAFG00000006512)
Hyrax	MODERN SPECIES	4656																U2SURP (ENSPCAG00000015251) #22
Tenrec	MODERN SPECIES	5491																U2SURP (ENSETEG00000000149) #22
Xenarthra	ANCESTRAL SPECIES	1201														ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23
Sloth	MODERN SPECIES	5032																U2SURP (ENSCHOG00000001300) #22
Armadillo	MODERN SPECIES	1886														PCOLCE2 (ENSDNOG00000046803) #20	PAQR9 (ENSDNOG00000045189)	U2SURP (ENSDNOG00000006427) #22	CHST2 (ENSDNOG00000036031) #23
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947.i #37	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00950000182987.c.a.a.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947.i #37	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00950000182987.c.a.a.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Diprotodontia	ANCESTRAL SPECIES	17	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947.i #37	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00950000182987.c.a.a.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
Diprotodontia_a	ANCESTRAL SPECIES	19	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000161947.i #37	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00950000182987.c.a.a.b	ENSGT00940000157819	ENSGT00940000161551	ENSGT00940000154674	ENSGT00910000144305
koala	MODERN SPECIES	210	FBXO36 (ENSPCIG00000032520)	SLC16A14 (ENSPCIG00000029187)	ENSPCIG00000036700 #8	RASA2 (ENSPCIG00000029184) #9	ENSPCIG00000033866 #11	GRK7 (ENSPCIG00000029179)	ATP1B3 (ENSPCIG00000029176) #12	TFDP2 (ENSPCIG00000029174) #13	GK5 (ENSPCIG00000029172) #14	ENSPCIG00000028735 #15	ENSPCIG00000028714 #16	PLS1 (ENSPCIG00000001474) #18	TRPC1 (ENSPCIG00000028304) #19	PCOLCE2 (ENSPCIG00000028236) #20	PAQR9 (ENSPCIG00000007113)	U2SURP (ENSPCIG00000004246) #22	CHST2 (ENSPCIG00000004149) #23	ENSPCIG00000031034 #24
Common wonbat	MODERN SPECIES	1046	FBXO36 (ENSVURG00010008178)	SLC16A14 (ENSVURG00010008191)	ZBTB38 (ENSVURG00010008197) #8	RASA2 (ENSVURG00010008213) #9	RNF7 (ENSVURG00010008229) #11	GRK7 (ENSVURG00010008270)	ATP1B3 (ENSVURG00010009116) #12	TFDP2 (ENSVURG00010009145) #13	GK5 (ENSVURG00010009628) #14	XRN1 (ENSVURG00010009981) #15	ATR (ENSVURG00010010065) #16	PLS1 (ENSVURG00010010250) #18	TRPC1 (ENSVURG00010010280) #19	PCOLCE2 (ENSVURG00010010407) #20	PAQR9 (ENSVURG00010010423)	U2SURP (ENSVURG00010010436) #22	CHST2 (ENSVURG00010010449) #23	SLC9A9 (ENSVURG00010010469) #24	ENSVURG00010010488	DIPK2A (ENSVURG00010010492) #25	ENSVURG00010010499	ENSVURG00010010517	ENSVURG00010010530	PLOD2 (ENSVURG00010010570) #36	PLSCR4 (ENSVURG00010010620) #37	PLSCR1 (ENSVURG00010010637)	PLSCR5 (ENSVURG00010010651)	ZIC4 (ENSVURG00010010689)	ZIC1 (ENSVURG00010010744)	AGTR1 (ENSVURG00010010772)	ENSVURG00010010778
Wallaby	MODERN SPECIES	6854																U2SURP (ENSMEUG00000000127) #22
Tasmanian devil	MODERN SPECIES	2	TRIP12 (ENSSHAG00000018173)	FBXO36 (ENSSHAG00000031805)	ENSSHAG00000017940	ENSSHAG00000025608 #8	RASA2 (ENSSHAG00000031423) #9	RNF7 (ENSSHAG00000017359) #11	ATP1B3 (ENSSHAG00000031427) #12	TFDP2 (ENSSHAG00000016738) #13	GK5 (ENSSHAG00000016479) #14	ATR (ENSSHAG00000015877) #16	XRN1 (ENSSHAG00000016207) #15	PLS1 (ENSSHAG00000015476) #18	TRPC1 (ENSSHAG00000015224) #19	PCOLCE2 (ENSSHAG00000014924) #20	PAQR9 (ENSSHAG00000028493)	U2SURP (ENSSHAG00000014407) #22	CHST2 (ENSSHAG00000026065) #23	ENSSHAG00000027403	SLC9A9 (ENSSHAG00000009445) #24	DIPK2A (ENSSHAG00000024587) #25	PLOD2 (ENSSHAG00000017470) #36	ENSSHAG00000022816 #37	PLSCR1 (ENSSHAG00000023808)	ENSSHAG00000017207 #37	PLSCR5 (ENSSHAG00000017048)	ENSSHAG00000029054	ZIC1 (ENSSHAG00000020712)	AGTR1 (ENSSHAG00000026043)	ENSSHAG00000007201	CPB1 (ENSSHAG00000006116)	CPA3 (ENSSHAG00000005508)
Opossum	DUPLICATION
Opossum	MODERN SPECIES	6	FBXO36 (ENSMODG00000037128)	SLC16A14 (ENSMODG00000021226)	ZBTB38 (ENSMODG00000047244) #8	RASA2 (ENSMODG00000021230) #9	RNF7 (ENSMODG00000021232) #11	GRK7 (ENSMODG00000021233)	ENSMODG00000045173 #12	TFDP2 (ENSMODG00000021234) #13	GK5 (ENSMODG00000021235) #14	XRN1 (ENSMODG00000021236) #15	ENSMODG00000045701 #16	PLS1 (ENSMODG00000021238) #18	TRPC1 (ENSMODG00000021239) #19	PCOLCE2 (ENSMODG00000021240) #20	PAQR9 (ENSMODG00000021241)	ENSMODG00000021242 #22	CHST2 (ENSMODG00000021243) #23	SLC9A9 (ENSMODG00000021244) #24	DIPK2A (ENSMODG00000021245) #25	ENSMODG00000029727 ##27	ENSMODG00000024742	ENSMODG00000051221	PLOD2 (ENSMODG00000021246) #36	PLSCR4 (ENSMODG00000024744) #37	ENSMODG00000021248	PLSCR5 (ENSMODG00000021249)	ENSMODG00000021250	ZIC1 (ENSMODG00000021251)	AGTR1 (ENSMODG00000024750)	ENSMODG00000024751	CPB1 (ENSMODG00000021255)
Opossum	MODERN SPECIES	7	PEX1 (ENSMODG00000010715)	RBM48 (ENSMODG00000010730)	ENSMODG00000010750	ENSMODG00000010759	CDK6 (ENSMODG00000010772)	ENSMODG00000036822	SUSD5 (ENSMODG00000025477)	CRTAP (ENSMODG00000010792)	ENSMODG00000039172	GLB1 (ENSMODG00000010812)	CCR4 (ENSMODG00000010830)	CX3CR1 (ENSMODG00000010797)	ENSMODG00000037704	ENSMODG00000010836	ENSMODG00000010840	ENSMODG00000010847 #22	ENSMODG00000049076	ENSMODG00000037587	ENSMODG00000010857	SLC25A38 (ENSMODG00000046685)	ENSMODG00000010882	ENSMODG00000010967	TMC2 (ENSMODG00000010987)	ENSMODG00000044548	ENSMODG00000024045	ENSMODG00000024043	ENSMODG00000048255	MYRIP (ENSMODG00000011047)	ENSMODG00000043014	EIF1B (ENSMODG00000002449)	CCK (ENSMODG00000011062)
Platypus	MODERN SPECIES		XRN1 (ENSOANG00000006735) #15	GK5 (ENSOANG00000008784) #14	TFDP2 (ENSOANG00000000434) #13	ATP1B3 (ENSOANG00000038147) #12	ENSOANG00000004270	RNF7 (ENSOANG00000046387) #11	RASA2 (ENSOANG00000002775) #9	FBXO36 (ENSOANG00000049141)	ENSOANG00000042808	ENSOANG00000003648	ATR (ENSOANG00000003647) #16	PLS1 (ENSOANG00000003646) #18	TRPC1 (ENSOANG00000003645) #19	PCOLCE2 (ENSOANG00000050644) #20	PAQR9 (ENSOANG00000003643)	U2SURP (ENSOANG00000003644) #22	CHST2 (ENSOANG00000038278) #23	SLC9A9 (ENSOANG00000011733) #24	DIPK2A (ENSOANG00000038588) #25	PLOD2 (ENSOANG00000001812) #36	PLSCR1 (ENSOANG00000012076)	PLSCR5 (ENSOANG00000003869)	ZIC4 (ENSOANG00000007364)	ZIC1 (ENSOANG00000039158)	AGTR1 (ENSOANG00000000457)	CPB1 (ENSOANG00000009290)	GYG1 (ENSOANG00000020607)	HLTF (ENSOANG00000000614)	HPS3 (ENSOANG00000000609)	CP (ENSOANG00000000613)	ENSOANG00000020605
Sauria	ANCESTRAL SPECIES	9	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00910000147942	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551.c	ENSGT00940000161551.d	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458
Archelosauria	ANCESTRAL SPECIES	11	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551.d	ENSGT00940000154674	ENSGT00910000144305	ENSGT00950000182825.B	ENSGT00390000015458
Archosauria	ANCESTRAL SPECIES	10	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT00950000185901	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000163773	ENSGT00940000159265	ENSGT00940000159409	ENSGT00940000156929	ENSGT00510000046981
Aves	ANCESTRAL SPECIES	13	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT00950000185901	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000163773	ENSGT00940000159265	ENSGT00940000159409	ENSGT00940000156929	ENSGT00510000046981
Neognathae	ANCESTRAL SPECIES	9	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT00950000185901	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000163773	ENSGT00940000159265	ENSGT00940000159409	ENSGT00940000156929	ENSGT00510000046981
Galloanserae	ANCESTRAL SPECIES	16	ENSGT00960000191050	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000163773	ENSGT00940000159265	ENSGT00940000159409	ENSGT00940000156929	ENSGT00510000046981
Anatidae	ANCESTRAL SPECIES	40	ENSGT00960000191050	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT01070000254044	ENSGT00950000183090.C
Duck	MODERN SPECIES	27	SLC16A14 (ENSAPLG00000007923)	ZBTB38 (ENSAPLG00000023064) #8	RASA2 (ENSAPLG00000006641) #9	RNF7 (ENSAPLG00000006609) #11	GRK7 (ENSAPLG00000006289)	ATP1B3 (ENSAPLG00000028873) #12	TFDP2 (ENSAPLG00000005603) #13	GK5 (ENSAPLG00000005240) #14	XRN1 (ENSAPLG00000004905) #15	ENSAPLG00000018108	ENSAPLG00000023352 #16	PLS1 (ENSAPLG00000003150) #18	TRPC1 (ENSAPLG00000002664) #19	PCOLCE2 (ENSAPLG00000002646) #20	PAQR9 (ENSAPLG00000028962)	U2SURP (ENSAPLG00000002348) #22	CHST2 (ENSAPLG00000002346) #23	ENSAPLG00000027343	SLC9A9 (ENSAPLG00000000606) #24	ENSAPLG00000028976	DIPK2A (ENSAPLG00000000595) #25	ENSAPLG00000025150	PLOD2 (ENSAPLG00000011127) #36	PLSCR5 (ENSAPLG00000003366)	ZIC4 (ENSAPLG00000003027)	ZIC1 (ENSAPLG00000002960)	CPB1 (ENSAPLG00000014834)	ENSAPLG00000019698	ENSAPLG00000024903	ENSAPLG00000014522	ENSAPLG00000022684
Pink-footed goose	MODERN SPECIES	50	ENSABRG00000012882	SLC16A14 (ENSABRG00000012859)	ENSABRG00000012845 #8	RASA2 (ENSABRG00000011916) #9	RNF7 (ENSABRG00000011818) #11	GRK7 (ENSABRG00000011805)	ATP1B3 (ENSABRG00000011800) #12	TFDP2 (ENSABRG00000011676) #13	GK5 (ENSABRG00000011533) #14	XRN1 (ENSABRG00000009808) #15	ATR (ENSABRG00000008889) #16	PLS1 (ENSABRG00000008170) #18	TRPC1 (ENSABRG00000007498) #19	PCOLCE2 (ENSABRG00000007322) #20	PAQR9 (ENSABRG00000007290)	U2SURP (ENSABRG00000007035) #22	CHST2 (ENSABRG00000006966) #23	SLC9A9 (ENSABRG00000004839) #24	DIPK2A (ENSABRG00000004589) #25	ENSABRG00000004515	PLOD2 (ENSABRG00000004453) #36	PLSCR1 (ENSABRG00000004424)	PLSCR5 (ENSABRG00000004398)	ZIC4 (ENSABRG00000004366)	ZIC1 (ENSABRG00000004358)	ENSABRG00000004353
Phasianidae	ANCESTRAL SPECIES	9	ENSGT00940000156517	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A.c #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00390000003197	ENSGT00390000006492	ENSGT01070000254044	ENSGT00940000163773	ENSGT00940000159265
Phasianidae_b	ANCESTRAL SPECIES	12	ENSGT00940000156517	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A.c #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT01070000254044	ENSGT00940000163773	ENSGT00940000159265	ENSGT00940000159409	ENSGT00940000156929
Chicken	MODERN SPECIES	38	TRIP12 (ENSGALG00010023215)	ZBTB38 (ENSGALG00010023274) #8	SLC16A14 (ENSGALG00010023290)	RASA2 (ENSGALG00010023887) #9	RNF7 (ENSGALG00010023910) #11	GRK7 (ENSGALG00010023921)	ATP1B3 (ENSGALG00010023940) #12	TFDP2 (ENSGALG00010023978) #13	GK5 (ENSGALG00010015703) #14	XRN1 (ENSGALG00010015719) #15	ATR (ENSGALG00010015749) #16	PLS1 (ENSGALG00010015774) #18	TRPC1 (ENSGALG00010015788) #19	PCOLCE2 (ENSGALG00010015809) #20	PAQR9 (ENSGALG00010015814)	U2SURP (ENSGALG00010015839) #22	CHST2 (ENSGALG00010015858) #23	SLC9A9 (ENSGALG00010015887) #24	C9H3orf58 (ENSGALG00010015963) #25	PLOD2 (ENSGALG00010016915) #36	PLSCR1 (ENSGALG00010016973)	PLSCR5 (ENSGALG00010016979)	ENSGALG00010018616	ZIC4 (ENSGALG00010016996)	ZIC1 (ENSGALG00010017016)	AGTR1 (ENSGALG00010017056)	NCBP2 (ENSGALG00010017122)	CPB1 (ENSGALG00010017144)	ENSGALG00010018633	PIGZ (ENSGALG00010017154)	MELTF (ENSGALG00010017240)
Turkey	MODERN SPECIES	2	ENSMGAG00000016846	ENSMGAG00000006732	ENSMGAG00000006730	AGTR1 (ENSMGAG00000016025)	ENSMGAG00000006671	ENSMGAG00000018648	ENSMGAG00000022223	ENSMGAG00000021202	ENSMGAG00000021213	ENSMGAG00000006667	ENSMGAG00000006650	ENSMGAG00000006583 #36	ENSMGAG00000006579 #25	ENSMGAG00000021305 #24	ENSMGAG00000017341 #23	ENSMGAG00000006549 #22	PAQR9 (ENSMGAG00000019037)	ENSMGAG00000006438 #19	ENSMGAG00000006503 #20	PLS1 (ENSMGAG00000006387) #18	ENSMGAG00000022658 #16	ENSMGAG00000006227 #16	ENSMGAG00000006333 #15	ENSMGAG00000006296 #14	ENSMGAG00000019178 #14	ENSMGAG00000019383	ENSMGAG00000020343	ENSMGAG00000020911 #13	ENSMGAG00000006194 #13	ATP1B3 (ENSMGAG00000006163) #12	ENSMGAG00000020143 #11
Japanese quail	MODERN SPECIES	27	SLC16A14 (ENSCJPG00005008199)	ENSCJPG00005008200	ZBTB38 (ENSCJPG00005008201) #8	RASA2 (ENSCJPG00005008207) #9	RNF7 (ENSCJPG00005009317) #11	GRK7 (ENSCJPG00005009318)	ATP1B3 (ENSCJPG00005009320) #12	TFDP2 (ENSCJPG00005009322) #13	GK5 (ENSCJPG00005009331) #14	XRN1 (ENSCJPG00005009521) #15	ATR (ENSCJPG00005011182) #16	PLS1 (ENSCJPG00005011236) #18	TRPC1 (ENSCJPG00005011279) #19	PCOLCE2 (ENSCJPG00005011380) #20	PAQR9 (ENSCJPG00005011390)	U2SURP (ENSCJPG00005011394) #22	CHST2 (ENSCJPG00005011802) #23	SLC9A9 (ENSCJPG00005011808) #24	DIPK2A (ENSCJPG00005012433) #25	PLOD2 (ENSCJPG00005012444) #36	PLSCR1 (ENSCJPG00005012445)	PLSCR5 (ENSCJPG00005012447)	ZIC4 (ENSCJPG00005012451)	ZIC1 (ENSCJPG00005012452)	AGTR1 (ENSCJPG00005012464)	CPB1 (ENSCJPG00005012465)	ENSCJPG00005012466	ENSCJPG00005012467	PIGZ (ENSCJPG00005012468)	MELTF (ENSCJPG00005012469)	DLG1 (ENSCJPG00005012470)
Neognathae_b	ANCESTRAL SPECIES	11	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT00950000185901	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000163773	ENSGT00940000159265	ENSGT00940000159409	ENSGT00940000156929	ENSGT00510000046981
Neognathae_c	ANCESTRAL SPECIES	13	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00950000183090.C	ENSGT00940000159265	ENSGT00940000159409	ENSGT00940000156929	ENSGT00510000046981
Golden eagle	MODERN SPECIES	1	FBXO36 (ENSACCG00020004683)	SLC16A14 (ENSACCG00020004670)	ENSACCG00020004666	RASA2 (ENSACCG00020004638) #9	RNF7 (ENSACCG00020004613) #11	GRK7 (ENSACCG00020004600)	ATP1B3 (ENSACCG00020004594) #12	TFDP2 (ENSACCG00020004582) #13	GK5 (ENSACCG00020004559) #14	XRN1 (ENSACCG00020004482) #15	ATR (ENSACCG00020004424) #16	PLS1 (ENSACCG00020004378) #18	TRPC1 (ENSACCG00020004359) #19	PCOLCE2 (ENSACCG00020004338) #20	PAQR9 (ENSACCG00020004315)	U2SURP (ENSACCG00020004207) #22	CHST2 (ENSACCG00020004115) #23	SLC9A9 (ENSACCG00020004104) #24	DIPK2A (ENSACCG00020004085) #25	PLOD2 (ENSACCG00020004053) #36	PLSCR1 (ENSACCG00020004017)	PLSCR5 (ENSACCG00020003992)	ENSACCG00020003967	ZIC4 (ENSACCG00020003961)	ZIC1 (ENSACCG00020003951)	AGTR1 (ENSACCG00020003934)	CPB1 (ENSACCG00020003908)	ENSACCG00020003888	ENSACCG00020003880	ENSACCG00020003871	MELTF (ENSACCG00020003860)
Kakapo	MODERN SPECIES	25	ENSSHBG00005018605	SLC16A14 (ENSSHBG00005018607)	ZBTB38 (ENSSHBG00005018618) #8	RASA2 (ENSSHBG00005018648) #9	RNF7 (ENSSHBG00005019071) #11	GRK7 (ENSSHBG00005019075)	ATP1B3 (ENSSHBG00005019077) #12	TFDP2 (ENSSHBG00005019080) #13	GK5 (ENSSHBG00005019084) #14	XRN1 (ENSSHBG00005019092) #15	ATR (ENSSHBG00005019112) #16	PLS1 (ENSSHBG00005019135) #18	TRPC1 (ENSSHBG00005006476) #19	PCOLCE2 (ENSSHBG00005006524) #20	PAQR9 (ENSSHBG00005006552)	U2SURP (ENSSHBG00005006721) #22	CHST2 (ENSSHBG00005008417) #23	SLC9A9 (ENSSHBG00005008423) #24	DIPK2A (ENSSHBG00005008426) #25	ENSSHBG00005008431	PLOD2 (ENSSHBG00005008619) #36	PLSCR1 (ENSSHBG00005016174)	PLSCR5 (ENSSHBG00005016186)	ZIC4 (ENSSHBG00005016193)	ZIC1 (ENSSHBG00005016200)	AGTR1 (ENSSHBG00005016206)	CPB1 (ENSSHBG00005016213)	ENSSHBG00005016226	ENSSHBG00005016240	MELTF (ENSSHBG00005016246)	DLG1 (ENSSHBG00005016540)
Passeriformes	ANCESTRAL SPECIES	9	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT00950000185901	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000163773	ENSGT00940000159265	ENSGT00940000159409	ENSGT00940000156929	ENSGT00510000046981
Passeriformes_d	ANCESTRAL SPECIES	10	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT00950000185901	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000163773	ENSGT00940000159265	ENSGT00940000159409	ENSGT00940000156929	ENSGT00510000046981
Flycatcher	MODERN SPECIES	28	SLC16A14 (ENSFALG00000006967)	ZBTB38 (ENSFALG00000023485) #8	RASA2 (ENSFALG00000006972) #9	RNF7 (ENSFALG00000028449) #11	GRK7 (ENSFALG00000006983)	ATP1B3 (ENSFALG00000006985) #12	TFDP2 (ENSFALG00000006994) #13	ENSFALG00000028977	GK5 (ENSFALG00000007016) #14	XRN1 (ENSFALG00000007021) #15	ENSFALG00000026872 #16	PLS1 (ENSFALG00000007050) #18	TRPC1 (ENSFALG00000007059) #19	PCOLCE2 (ENSFALG00000007068) #20	PAQR9 (ENSFALG00000023853)	U2SURP (ENSFALG00000007070) #22	CHST2 (ENSFALG00000007074) #23	SLC9A9 (ENSFALG00000007078) #24	DIPK2A (ENSFALG00000025251) #25	PLOD2 (ENSFALG00000007086) #36	PLSCR1 (ENSFALG00000007087)	PLSCR5 (ENSFALG00000007090)	ZIC4 (ENSFALG00000007091)	ZIC1 (ENSFALG00000007094)	AGTR1 (ENSFALG00000015223)	CPB1 (ENSFALG00000007096)	ENSFALG00000007099	PIGZ (ENSFALG00000007107)	MELTF (ENSFALG00000007108)	DLG1 (ENSFALG00000007119)	ENSFALG00000024748
Passeriformes_g	ANCESTRAL SPECIES	11	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT00950000185901	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000163773	ENSGT00940000159265	ENSGT00940000159409	ENSGT00940000156929	ENSGT00510000046981
Medium ground finch	MODERN SPECIES	74	PID1 (ENSGFOG00000007546)	DNER (ENSGFOG00000007556)	TRIP12 (ENSGFOG00000007778)	SLC16A14 (ENSGFOG00000007833)	ZBTB38 (ENSGFOG00000007842) #8	RASA2 (ENSGFOG00000007847) #9	GRK7 (ENSGFOG00000007866)	ATP1B3 (ENSGFOG00000007870) #12	TFDP2 (ENSGFOG00000007883) #13	GK5 (ENSGFOG00000007901) #14	XRN1 (ENSGFOG00000007922) #15	ATR (ENSGFOG00000008004) #16	PLS1 (ENSGFOG00000008035) #18	TRPC1 (ENSGFOG00000008049) #19	PCOLCE2 (ENSGFOG00000008058) #20	U2SURP (ENSGFOG00000008074) #22	CHST2 (ENSGFOG00000008128) #23	SLC9A9 (ENSGFOG00000008133) #24	DIPK2A (ENSGFOG00000008145) #25
Passeroidea	ANCESTRAL SPECIES	13	ENSGT00940000160895	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT00950000185901	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT01070000254044	ENSGT00950000183090.C	ENSGT00940000159265	ENSGT00940000159409	ENSGT00940000156929
Zebra finch	MODERN SPECIES	31	TRIP12 (ENSTGUG00000008316)	ENSTGUG00000021578	SLC16A14 (ENSTGUG00000008367)	ZBTB38 (ENSTGUG00000008376) #8	RASA2 (ENSTGUG00000008379) #9	GRK7 (ENSTGUG00000008425)	ATP1B3 (ENSTGUG00000008432) #12	TFDP2 (ENSTGUG00000020710) #13	ENSTGUG00000023789	GK5 (ENSTGUG00000008478) #14	XRN1 (ENSTGUG00000008498) #15	ATR (ENSTGUG00000008533) #16	PLS1 (ENSTGUG00000008588) #18	TRPC1 (ENSTGUG00000008641) #19	PCOLCE2 (ENSTGUG00000008671) #20	U2SURP (ENSTGUG00000008687) #22	CHST2 (ENSTGUG00000008722) #23	SLC9A9 (ENSTGUG00000008723) #24	DIPK2A (ENSTGUG00000008760) #25	PLOD2 (ENSTGUG00000008767) #36	PLSCR1 (ENSTGUG00000008816)	PLSCR5 (ENSTGUG00000008835)	ZIC4 (ENSTGUG00000008837)	ZIC1 (ENSTGUG00000008838)	AGTR1 (ENSTGUG00000026547)	CPB1 (ENSTGUG00000008845)	ENSTGUG00000008864	ENSTGUG00000023902	ENSTGUG00000028211	MELTF (ENSTGUG00000008871)	DLG1 (ENSTGUG00000008892)
Common canary	MODERN SPECIES	10	TRIP12 (ENSSCAG00000001180)	SLC16A14 (ENSSCAG00000001152)	ZBTB38 (ENSSCAG00000001144) #8	RASA2 (ENSSCAG00000001119) #9	RNF7 (ENSSCAG00000001109) #11	GRK7 (ENSSCAG00000001105)	ATP1B3 (ENSSCAG00000001072) #12	TFDP2 (ENSSCAG00000001055) #13	GK5 (ENSSCAG00000000853) #14	XRN1 (ENSSCAG00000000804) #15	ATR (ENSSCAG00000000772) #16	PLS1 (ENSSCAG00000000757) #18	TRPC1 (ENSSCAG00000000743) #19	PCOLCE2 (ENSSCAG00000000701) #20	PAQR9 (ENSSCAG00000000693)	U2SURP (ENSSCAG00000000250) #22	SLC9A9 (ENSSCAG00000015576) #24	DIPK2A (ENSSCAG00000015570) #25	PLOD2 (ENSSCAG00000015557) #36	PLSCR1 (ENSSCAG00000015552)	PLSCR5 (ENSSCAG00000015535)	ZIC4 (ENSSCAG00000015517)	ZIC1 (ENSSCAG00000015511)	AGTR1 (ENSSCAG00000015509)	CPB1 (ENSSCAG00000015497)	ENSSCAG00000015490	ENSSCAG00000015488	MELTF (ENSSCAG00000015485)	DLG1 (ENSSCAG00000015484)	BDH1 (ENSSCAG00000015483)	ENSSCAG00000015482
Great tit	MODERN SPECIES	29	TRIP12 (ENSPMJG00000017232)	SLC16A14 (ENSPMJG00000018449)	ZBTB38 (ENSPMJG00000018450) #8	ENSPMJG00000018451	RASA2 (ENSPMJG00000018452) #9	RNF7 (ENSPMJG00000018453) #11	GRK7 (ENSPMJG00000018454)	ATP1B3 (ENSPMJG00000018455) #12	TFDP2 (ENSPMJG00000018456) #13	GK5 (ENSPMJG00000018478) #14	XRN1 (ENSPMJG00000018509) #15	PLS1 (ENSPMJG00000018592) #18	TRPC1 (ENSPMJG00000018593) #19	PCOLCE2 (ENSPMJG00000018594) #20	PAQR9 (ENSPMJG00000018595)	U2SURP (ENSPMJG00000018596) #22	CHST2 (ENSPMJG00000018597) #23	SLC9A9 (ENSPMJG00000018598) #24	DIPK2A (ENSPMJG00000018599) #25	PLOD2 (ENSPMJG00000018603) #36	PLSCR1 (ENSPMJG00000018604)	PLSCR5 (ENSPMJG00000018605)	ZIC4 (ENSPMJG00000018608)	ZIC1 (ENSPMJG00000018609)	AGTR1 (ENSPMJG00000018617)	CPB1 (ENSPMJG00000018618)	ENSPMJG00000018619	ENSPMJG00000018620	MELTF (ENSPMJG00000018621)	DLG1 (ENSPMJG00000018622)	BDH1 (ENSPMJG00000018623)
African ostrich	MODERN SPECIES	1075				ZBTB38 (ENSSCUG00000014505) #8	RASA2 (ENSSCUG00000014519) #9	RNF7 (ENSSCUG00000014549) #11	GRK7 (ENSSCUG00000014550)	ATP1B3 (ENSSCUG00000014552) #12	TFDP2 (ENSSCUG00000014555) #13	GK5 (ENSSCUG00000014571) #14	XRN1 (ENSSCUG00000014591) #15	ATR (ENSSCUG00000014616) #16	PLS1 (ENSSCUG00000014649) #18	TRPC1 (ENSSCUG00000014651) #19	PCOLCE2 (ENSSCUG00000014659) #20	U2SURP (ENSSCUG00000014671) #22	ENSSCUG00000014689	SLC9A9 (ENSSCUG00000014692) #24	DIPK2A (ENSSCUG00000014695) #25	PLOD2 (ENSSCUG00000014760) #36	PLSCR1 (ENSSCUG00000014909)	PLSCR5 (ENSSCUG00000014915)	ZIC4 (ENSSCUG00000014920)	ENSSCUG00000014923	AGTR1 (ENSSCUG00000014940)	CPB1 (ENSSCUG00000014945)	ENSSCUG00000014949	PIGZ (ENSSCUG00000014954)	MELTF (ENSSCUG00000014958)	DLG1 (ENSSCUG00000014976)	BDH1 (ENSSCUG00000015023)
Australian saltwater crocodile	MODERN SPECIES	30	ENSCPRG00005001850	ZBTB38 (ENSCPRG00005001840) #8	RASA2 (ENSCPRG00005001834) #9	RNF7 (ENSCPRG00005001821) #11	GRK7 (ENSCPRG00005001818)	ATP1B3 (ENSCPRG00005001815) #12	TFDP2 (ENSCPRG00005001811) #13	ENSCPRG00005001780	GK5 (ENSCPRG00005001775) #14	XRN1 (ENSCPRG00005001722) #15	ATR (ENSCPRG00005001241) #16	PLS1 (ENSCPRG00005000638) #18	TRPC1 (ENSCPRG00005000420) #19	PCOLCE2 (ENSCPRG00005000291) #20	PAQR9 (ENSCPRG00005000250)	U2SURP (ENSCPRG00005000199) #22	CHST2 (ENSCPRG00005000183) #23	ENSCPRG00005000176	SLC9A9 (ENSCPRG00005000144) #24	DIPK2A (ENSCPRG00005000080) #25	PLOD2 (ENSCPRG00005013762) #36	PLSCR1 (ENSCPRG00005013756)	PLSCR5 (ENSCPRG00005013751)	ZIC4 (ENSCPRG00005013747)	ZIC1 (ENSCPRG00005013746)	CPB1 (ENSCPRG00005013717)	ENSCPRG00005013708	DLG1 (ENSCPRG00005013601)	BDH1 (ENSCPRG00005013588)	ENSCPRG00005013587	ACADVL (ENSCPRG00005013499)
Cryptodira	ANCESTRAL SPECIES	16	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551.d	ENSGT00940000154674	ENSGT00910000144305	ENSGT01040000240444.A.b.a.b.gb	ENSGT01040000240444.A.b.a.a
Testudinoidea	ANCESTRAL SPECIES	9	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551.d	ENSGT00940000154674	ENSGT00910000144305	ENSGT01040000240444.A.b.a.a.a	ENSGT00950000182825.B
Emydidae	ANCESTRAL SPECIES	3	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551.d	ENSGT00940000154674	ENSGT00910000144305	ENSGT01040000240444.A.b.a.a.a	ENSGT00950000182825.B
painted turtle	MODERN SPECIES	768						ENSCPBG00000001731 #11	GRK7 (ENSCPBG00000001801)	ATP1B3 (ENSCPBG00000002160) #12	TFDP2 (ENSCPBG00000002199) #13	GK5 (ENSCPBG00000002311) #14	ATR (ENSCPBG00000008903) #16	PLS1 (ENSCPBG00000008914) #18	TRPC1 (ENSCPBG00000008916) #19	PCOLCE2 (ENSCPBG00000008919) #20	PAQR9 (ENSCPBG00000008921)	U2SURP (ENSCPBG00000008969) #22	CHST2 (ENSCPBG00000011801) #23	SLC9A9 (ENSCPBG00000011803) #24	DIPK2A (ENSCPBG00000011813) #25	PLOD2 (ENSCPBG00000011834) #36	PLSCR1 (ENSCPBG00000011847)	PLSCR5 (ENSCPBG00000011856)	ZIC4 (ENSCPBG00000011864)	ZIC1 (ENSCPBG00000011867)	AGTR1 (ENSCPBG00000011883)	CPB1 (ENSCPBG00000011887)	CPA3 (ENSCPBG00000011893)	GYG1 (ENSCPBG00000011895)
Three-toed box turtle	MODERN SPECIES	32	SLC16A14 (ENSTMTG00000017050)	ENSTMTG00000017056	RASA2 (ENSTMTG00000017225) #9	ENSTMTG00000019449	RNF7 (ENSTMTG00000019474) #11	GRK7 (ENSTMTG00000019502)	ATP1B3 (ENSTMTG00000019721) #12	TFDP2 (ENSTMTG00000019753) #13	GK5 (ENSTMTG00000019887) #14	XRN1 (ENSTMTG00000019913) #15	ATR (ENSTMTG00000019972) #16	PLS1 (ENSTMTG00000020021) #18	TRPC1 (ENSTMTG00000020038) #19	PCOLCE2 (ENSTMTG00000020055) #20	PAQR9 (ENSTMTG00000020066)	U2SURP (ENSTMTG00000020082) #22	CHST2 (ENSTMTG00000020129) #23	SLC9A9 (ENSTMTG00000020136) #24	DIPK2A (ENSTMTG00000020145) #25	PLOD2 (ENSTMTG00000020153) #36	PLSCR1 (ENSTMTG00000020194)	PLSCR5 (ENSTMTG00000020211)	ZIC4 (ENSTMTG00000020239)	ZIC1 (ENSTMTG00000020249)	AGTR1 (ENSTMTG00000020257)	CPB1 (ENSTMTG00000020261)	CPA3 (ENSTMTG00000020271)	GYG1 (ENSTMTG00000020282)	HLTF (ENSTMTG00000020293)	ENSTMTG00000020332	ENSTMTG00000020335
Testudinidae	ANCESTRAL SPECIES	7	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551.d	ENSGT00940000154674	ENSGT00910000144305	ENSGT01040000240444.A.b.a.a.a	ENSGT00950000182825.B
Abingdon island giant tortoise	MODERN SPECIES	2192						SNORC (ENSCABG00000018574)	NGEF (ENSCABG00000018573)	NEU2 (ENSCABG00000018571)	INPP5D (ENSCABG00000018570)	ATG16L1 (ENSCABG00000018566)	SAG (ENSCABG00000018564)	DGKD (ENSCABG00000018227)	ENSCABG00000018205	PCOLCE2 (ENSCABG00000018202) #20	PAQR9 (ENSCABG00000018199)	U2SURP (ENSCABG00000017539) #22	CHST2 (ENSCABG00000017499) #23	SLC9A9 (ENSCABG00000017493) #24	DIPK2A (ENSCABG00000017491) #25
Goode s thornscrub tortoise	MODERN SPECIES	23	ENSGEVG00005010729	ZBTB38 (ENSGEVG00005010689) #8	RASA2 (ENSGEVG00005010641) #9	RNF7 (ENSGEVG00005010596) #11	GRK7 (ENSGEVG00005010275)	ATP1B3 (ENSGEVG00005010202) #12	TFDP2 (ENSGEVG00005010169) #13	GK5 (ENSGEVG00005009438) #14	XRN1 (ENSGEVG00005009112) #15	ATR (ENSGEVG00005008879) #16	ENSGEVG00005008824	PLS1 (ENSGEVG00005008792) #18	TRPC1 (ENSGEVG00005008765) #19	PCOLCE2 (ENSGEVG00005008665) #20	PAQR9 (ENSGEVG00005008620)	U2SURP (ENSGEVG00005007971) #22	CHST2 (ENSGEVG00005007797) #23	SLC9A9 (ENSGEVG00005007763) #24	DIPK2A (ENSGEVG00005007746) #25	PLOD2 (ENSGEVG00005006208) #36	PLSCR1 (ENSGEVG00005005744)	PLSCR5 (ENSGEVG00005011532)	ZIC4 (ENSGEVG00005011456)	ZIC1 (ENSGEVG00005011414)	AGTR1 (ENSGEVG00005011402)	CPB1 (ENSGEVG00005011227)	CPA3 (ENSGEVG00005011172)	GYG1 (ENSGEVG00005011136)	HLTF (ENSGEVG00005011026)	ENSGEVG00005010957	ENSGEVG00005010818
Chinese turtle	MODERN SPECIES	1165	ENSPSIG00000008015	ENSPSIG00000007894	SETD7 (ENSPSIG00000007889)	ENSPSIG00000007868	MGST2 (ENSPSIG00000007863)	MAML3 (ENSPSIG00000007856)	ATP1B3 (ENSPSIG00000007680) #12	TFDP2 (ENSPSIG00000007519) #13	GK5 (ENSPSIG00000007285) #14	XRN1 (ENSPSIG00000018050) #15	ATR (ENSPSIG00000017887) #16	PLS1 (ENSPSIG00000017601) #18	TRPC1 (ENSPSIG00000017273) #19	PCOLCE2 (ENSPSIG00000017254) #20	PAQR9 (ENSPSIG00000000411)	U2SURP (ENSPSIG00000016578) #22	CHST2 (ENSPSIG00000016466) #23	ENSPSIG00000016413 #24	ENSPSIG00000016225 #24	DIPK2A (ENSPSIG00000016174) #25	ENSPSIG00000000404
Lepidosauria	ANCESTRAL SPECIES	12	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00910000147942	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551.c	ENSGT00940000161551.d	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458
Episquamata	ANCESTRAL SPECIES	2	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00910000147942	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334.c	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435.y.b	ENSGT00940000154435.y.a.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551.c	ENSGT00940000161551.d	ENSGT00940000154674	ENSGT00910000144305
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00910000147942	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334.c	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435.y.b	ENSGT00940000154435.y.a.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551.c	ENSGT00940000161551.d	ENSGT00940000154674	ENSGT00910000144305
Elapidae	ANCESTRAL SPECIES	4	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334.c	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435.y.b.c.a	ENSGT00940000154435.y.a.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551.c	ENSGT00940000161551.d	ENSGT00940000154674	ENSGT00910000144305
Elapidae_a	ANCESTRAL SPECIES		ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334.c	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435.y.b.c.a	ENSGT00940000154435.y.a.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551.c	ENSGT00940000161551.d	ENSGT00940000154674	ENSGT00910000144305
Blue-lipped sea krait	MODERN SPECIES	10918																U2SURP (ENSLLTG00000006972) #22
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334.c	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435.y.b.c.a	ENSGT00940000154435.y.a.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551.c	ENSGT00940000161551.d	ENSGT00940000154674	ENSGT00910000144305
Eastern brown snake	MODERN SPECIES	16	FBXO36 (ENSPTXG00000009745)	SLC16A14 (ENSPTXG00000009746)	ENSPTXG00000009748	ZBTB38 (ENSPTXG00000009749) #8	RASA2 (ENSPTXG00000009751) #9	RNF7 (ENSPTXG00000009753) #11	GRK7 (ENSPTXG00000009756)	ATP1B3 (ENSPTXG00000004130) #12	GK5 (ENSPTXG00000004131) #14	XRN1 (ENSPTXG00000004133) #15	ATR (ENSPTXG00000004144) #16	PLS1 (ENSPTXG00000004568) #18	TRPC1 (ENSPTXG00000004571) #19	PCOLCE2 (ENSPTXG00000004573) #20	PAQR9 (ENSPTXG00000004575)	U2SURP (ENSPTXG00000004578) #22	CHST2 (ENSPTXG00000004582) #23	SLC9A9 (ENSPTXG00000004584) #24	DIPK2A (ENSPTXG00000004588) #25	ENSPTXG00000004590	PLOD2 (ENSPTXG00000004593) #36	ENSPTXG00000004599	ENSPTXG00000004601	PLSCR5 (ENSPTXG00000004603)	ZIC4 (ENSPTXG00000004613)	ENSPTXG00000004615	ZIC1 (ENSPTXG00000004617)	AGTR1 (ENSPTXG00000004618)	CPB1 (ENSPTXG00000004621)	ENSPTXG00000004622	ENSPTXG00000004624
Mainland tiger snake	MODERN SPECIES		SLC16A14 (ENSNSUG00000017919)	ENSNSUG00000017920	ENSNSUG00000017921 #8	RASA2 (ENSNSUG00000017922) #9	RNF7 (ENSNSUG00000017923) #11	GRK7 (ENSNSUG00000017924)	ATP1B3 (ENSNSUG00000017925) #12	ENSNSUG00000017926	GK5 (ENSNSUG00000017927) #14	XRN1 (ENSNSUG00000017931) #15	ATR (ENSNSUG00000018159) #16	PLS1 (ENSNSUG00000018160) #18	TRPC1 (ENSNSUG00000018161) #19	PCOLCE2 (ENSNSUG00000018162) #20	PAQR9 (ENSNSUG00000018174)	U2SURP (ENSNSUG00000018175) #22	CHST2 (ENSNSUG00000018357) #23	SLC9A9 (ENSNSUG00000018359) #24	DIPK2A (ENSNSUG00000018360) #25	PLOD2 (ENSNSUG00000018362) #36	ENSNSUG00000018363	ENSNSUG00000018364	ENSNSUG00000018365	PLSCR5 (ENSNSUG00000018370)	ZIC4 (ENSNSUG00000018371)	ZIC1 (ENSNSUG00000018372)	AGTR1 (ENSNSUG00000018373)	CPB1 (ENSNSUG00000018374)	CPA3 (ENSNSUG00000018375)	GYG1 (ENSNSUG00000018376)	HLTF (ENSNSUG00000018377)
Indian cobra	MODERN SPECIES	3	TRIP12 (ENSNNAG00000010876)	FBXO36 (ENSNNAG00000011155)	SLC16A14 (ENSNNAG00000011174)	ENSNNAG00000011203	RASA2 (ENSNNAG00000011267) #9	RNF7 (ENSNNAG00000011407) #11	GRK7 (ENSNNAG00000011426)	ATP1B3 (ENSNNAG00000011441) #12	GK5 (ENSNNAG00000011468) #14	ENSNNAG00000011555 #15	ENSNNAG00000011684 #15	PLS1 (ENSNNAG00000011698) #18	TRPC1 (ENSNNAG00000011760) #19	PCOLCE2 (ENSNNAG00000011940) #20	PAQR9 (ENSNNAG00000011988)	U2SURP (ENSNNAG00000012126) #22	CHST2 (ENSNNAG00000013297) #23	SLC9A9 (ENSNNAG00000013322) #24	DIPK2A (ENSNNAG00000013354) #25	PLOD2 (ENSNNAG00000013369) #36	ENSNNAG00000013450	ENSNNAG00000013474	ENSNNAG00000013493	ENSNNAG00000013507	ENSNNAG00000013520	ENSNNAG00000013527	PLSCR5 (ENSNNAG00000013533)	ZIC4 (ENSNNAG00000013554)	ZIC1 (ENSNNAG00000013572)	AGTR1 (ENSNNAG00000013588)	CPB1 (ENSNNAG00000013598)
Lizard	MODERN SPECIES	2	ZBTB38 (ENSACAG00000005397) #8	RASA2 (ENSACAG00000005140) #9	ENSACAG00000045069	RNF7 (ENSACAG00000042179) #11	GRK7 (ENSACAG00000005127)	ENSACAG00000043689	ATP1B3 (ENSACAG00000005114) #12	TFDP2 (ENSACAG00000005086) #13	ENSACAG00000044984	GK5 (ENSACAG00000005041) #14	XRN1 (ENSACAG00000004985) #15	ATR (ENSACAG00000004915) #16	PLS1 (ENSACAG00000004791) #18	TRPC1 (ENSACAG00000004701) #19	PCOLCE2 (ENSACAG00000004684) #20	U2SURP (ENSACAG00000009512) #22	CHST2 (ENSACAG00000009603) #23	SLC9A9 (ENSACAG00000009684) #24	DIPK2A (ENSACAG00000009738) #25	ENSACAG00000006940	ZIC1 (ENSACAG00000006947)	AGTR1 (ENSACAG00000006959)	CPB1 (ENSACAG00000006963)	ENSACAG00000007060	ENSACAG00000029006	ENSACAG00000039045	GYG1 (ENSACAG00000007075)	HLTF (ENSACAG00000007116)	ENSACAG00000035614	CP (ENSACAG00000007356)	TM4SF18 (ENSACAG00000007503)
Laterata	ANCESTRAL SPECIES		ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00940000162334.c	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435.y.b	ENSGT00940000154435.y.a.a	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819.a	ENSGT00940000161551.c	ENSGT00940000161551.d	ENSGT00940000154674	ENSGT00910000144305
Common wall lizard	MODERN SPECIES	13	ENSPMRG00000008124	ZBTB38 (ENSPMRG00000008135) #8	RASA2 (ENSPMRG00000008165) #9	RNF7 (ENSPMRG00000008187) #11	GRK7 (ENSPMRG00000008216)	ATP1B3 (ENSPMRG00000008279) #12	TFDP2 (ENSPMRG00000008286) #13	GK5 (ENSPMRG00000008301) #14	XRN1 (ENSPMRG00000008330) #15	ENSPMRG00000008373 #16	PLS1 (ENSPMRG00000008379) #18	TRPC1 (ENSPMRG00000008398) #19	PCOLCE2 (ENSPMRG00000008409) #20	PAQR9 (ENSPMRG00000008415)	ENSPMRG00000008421	U2SURP (ENSPMRG00000008445) #22	CHST2 (ENSPMRG00000008667) #23	SLC9A9 (ENSPMRG00000008672) #24	DIPK2A (ENSPMRG00000008685) #25	PLOD2 (ENSPMRG00000008688) #36	ENSPMRG00000008693 ##29	ENSPMRG00000008706	PLSCR5 (ENSPMRG00000008724)	ZIC4 (ENSPMRG00000008741)	ZIC1 (ENSPMRG00000008754)	AGTR1 (ENSPMRG00000008764)	CPB1 (ENSPMRG00000008767)	ENSPMRG00000008774	ENSPMRG00000008780	HLTF (ENSPMRG00000008820)	GYG1 (ENSPMRG00000008885)
Argentine black and white tegu	MODERN SPECIES	19	SLC16A14 (ENSSMRG00000016380)	ENSSMRG00000016381	ZBTB38 (ENSSMRG00000016382) #8	RASA2 (ENSSMRG00000016383) #9	RNF7 (ENSSMRG00000016386) #11	GRK7 (ENSSMRG00000016387)	ATP1B3 (ENSSMRG00000016399) #12	TFDP2 (ENSSMRG00000016400) #13	GK5 (ENSSMRG00000016403) #14	XRN1 (ENSSMRG00000016406) #15	ATR (ENSSMRG00000016408) #16	PLS1 (ENSSMRG00000016409) #18	TRPC1 (ENSSMRG00000016410) #19	ENSSMRG00000016414 #20	PAQR9 (ENSSMRG00000016416)	U2SURP (ENSSMRG00000016420) #22	CHST2 (ENSSMRG00000017568) #23	SLC9A9 (ENSSMRG00000017575) #24	ENSSMRG00000017620	DIPK2A (ENSSMRG00000017621) #25	PLOD2 (ENSSMRG00000017624) #36	ENSSMRG00000017920	ENSSMRG00000017921	PLSCR5 (ENSSMRG00000017922)	ENSSMRG00000017933	ZIC4 (ENSSMRG00000017943)	ZIC1 (ENSSMRG00000017946)	ENSSMRG00000017951	AGTR1 (ENSSMRG00000017957)	CPB1 (ENSSMRG00000017959)	CPA3 (ENSSMRG00000017964)
tuatara	MODERN SPECIES	1415																U2SURP (ENSSPUG00000013871) #22	SLC9A9 (ENSSPUG00000013413) #24	DIPK2A (ENSSPUG00000013345) #25
Anura	ANCESTRAL SPECIES	13	ENSGT00940000160465	ENSGT00940000153664.B	ENSGT00940000154942	ENSGT00390000007965	ENSGT00390000010744	ENSGT00940000161579	ENSGT00890000139453.b	ENSGT00940000157469	ENSGT00940000165430	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649.w #20	ENSGT00940000162334	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000161728	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000161551.a	ENSGT00940000154674	ENSGT00910000144305	ENSGT00390000015458	ENSGT00940000155866
Frog	MODERN SPECIES	5	rhbdd1 (ENSXETG00000020088)	irs1 (ENSXETG00000020086)	ENSXETG00000047782	ENSXETG00000049437	nyap2 (ENSXETG00000005150)	dock10 (ENSXETG00000005142)	gucy1b2 (ENSXETG00000031936)	xrn1 (ENSXETG00000046350) #16	pls1 (ENSXETG00000000598) #18	trpc1 (ENSXETG00000000596) #19	pcolce2 (ENSXETG00000000593) #20	ENSXETG00000045587	paqr9 (ENSXETG00000046963)	ENSXETG00000043030	ENSXETG00000022137	u2surp (ENSXETG00000022133) #22	chst2 (ENSXETG00000022131) #23	ENSXETG00000048586	ENSXETG00000044419	slc9a9 (ENSXETG00000001625) #24	ENSXETG00000049327	dipk2a (ENSXETG00000001626) #25	plod2 (ENSXETG00000001628) #36	ENSXETG00000045404	plscr1 (ENSXETG00000015514)	plscr2 (ENSXETG00000001630)	plscr5 (ENSXETG00000034906)	zic4 (ENSXETG00000015475)	zic1 (ENSXETG00000015467)	agtr1 (ENSXETG00000034925)	cpb1 (ENSXETG00000016077)
Leishan spiny toad	MODERN SPECIES	7	NYAP2 (ENSLLEG00000012018)	ENSLLEG00000011994	ENSLLEG00000011979	DOCK10 (ENSLLEG00000011252)	ENSLLEG00000011131	ENSLLEG00000011113	XRN1 (ENSLLEG00000009818) #15	ATR (ENSLLEG00000009372) #16	PLS1 (ENSLLEG00000009077) #18	ENSLLEG00000009050	TRPC1 (ENSLLEG00000008837) #19	PCOLCE2 (ENSLLEG00000008677) #20	PAQR9 (ENSLLEG00000008630)	ENSLLEG00000008607	ENSLLEG00000008591	U2SURP (ENSLLEG00000008115) #22	CHST2 (ENSLLEG00000008080) #23	ENSLLEG00000008063	ENSLLEG00000008048	ENSLLEG00000008040	SLC9A9 (ENSLLEG00000007981) #24	ENSLLEG00000007970	ENSLLEG00000007964	ENSLLEG00000007961	DIPK2A (ENSLLEG00000007949) #25	ENSLLEG00000007935	ENSLLEG00000007911	ENSLLEG00000007904	ENSLLEG00000007868	PLOD2 (ENSLLEG00000007580) #36	ENSLLEG00000007543
Coelacanth	MODERN SPECIES	1069						RNF7 (ENSLACG00000004066) #11	GRK7 (ENSLACG00000004533)	ATP1B3 (ENSLACG00000005279) #12	TFDP2 (ENSLACG00000006246) #13	GK5 (ENSLACG00000008129) #14	XRN1 (ENSLACG00000009020) #15	ATR (ENSLACG00000009886) #16	PLS1 (ENSLACG00000011086) #18	TRPC1 (ENSLACG00000011455) #19	PCOLCE2 (ENSLACG00000011980) #20	U2SURP (ENSLACG00000012318) #22	CHST2 (ENSLACG00000012735) #23
Actinopterygii	ANCESTRAL SPECIES	41	ENSGT00390000001015	ENSGT00940000160895	ENSGT00510000050180	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000154435	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000154674	ENSGT00910000144305	ENSGT00940000156929	ENSGT00940000156601	ENSGT00940000153249.b.d.b	ENSGT00940000153249.b.d.a
Neopterygii	ANCESTRAL SPECIES	12	ENSGT00940000161449 #8	ENSGT00940000158201 #9	ENSGT00940000154035.a	ENSGT00940000160889	ENSGT00530000068221 #10	ENSGT00940000155481 #11	ENSGT00940000160511	ENSGT01030000234579.A.b #12	ENSGT00940000157909 #13	ENSGT01000000214434.A #14	ENSGT00670000098080 #15	ENSGT00940000155714 #16	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000161292 #23	ENSGT00940000160094 #24	ENSGT00520000055625.b #25	ENSGT01030000234558.A.a.b #36	ENSGT00940000165699.B	ENSGT00940000154200.B	ENSGT00940000160269	ENSGT01050000244888.b.a.c.b	ENSGT00940000157819	ENSGT00940000154674	ENSGT00910000144305	ENSGT00940000156929	ENSGT00940000156601	ENSGT00940000153249.b.d.b	ENSGT00940000153249.b.d.a
Osteoglossocephalai	ANCESTRAL SPECIES	142	ENSGT00940000154674.q.a	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000182355	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22
Clupeocephala	ANCESTRAL SPECIES	36	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000182355	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00970000197448	ENSGT00940000155714 #16	ENSGT00530000063529.C	ENSGT00940000160622.ab	ENSGT00390000005140.b.b	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00940000155667.b.a	ENSGT00400000023530.b	ENSGT00940000155252.fb.a	ENSGT00940000153601.a.b.c	ENSGT00940000160961	ENSGT00940000163532	ENSGT00940000163518	ENSGT00530000063786.a
Euteleosteomorpha	ANCESTRAL SPECIES	36	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000182355	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160622.ab	ENSGT00390000005140.b.b	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00940000155667.b.a	ENSGT00400000023530.b	ENSGT00940000155252.fb.a	ENSGT00940000153601.a.b.c	ENSGT00940000160961	ENSGT00530000063786.a	ENSGT00940000154535.D.vb.a	ENSGT00940000156998.j.a	ENSGT00950000182886.a.a.a.c	ENSGT00940000155624.a.a	ENSGT00950000183110.b.b.k.a
Acanthomorphata	ANCESTRAL SPECIES	17	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000182355	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Cod	MODERN SPECIES	15	ENSGMOG00000023226	ENSGMOG00000006315	ENSGMOG00000036160	ENSGMOG00000023929	ENSGMOG00000030613	ENSGMOG00000002334	L3MBTL4 (ENSGMOG00000012699)	ARHGAP28 (ENSGMOG00000022688)	LAMA1 (ENSGMOG00000031073)	ENSGMOG00000036880	plod2 (ENSGMOG00000017076) #36	dipk2ab (ENSGMOG00000014692) #25	CHST2 (ENSGMOG00000026024) #23	trpc1 (ENSGMOG00000002586) #19	pcolce2b (ENSGMOG00000002613) #20	U2SURP (ENSGMOG00000002641) #22	ACKR4 (ENSGMOG00000026042)	ACAD11 (ENSGMOG00000010092)	UBA5 (ENSGMOG00000010107)	NPHP3 (ENSGMOG00000010120)	arl8 (ENSGMOG00000033264)	ENSGMOG00000006751	plxdc2b (ENSGMOG00000004882)	ENSGMOG00000027734	ENSGMOG00000002509	zfand1 (ENSGMOG00000002529)	ENSGMOG00000024438	maf1b (ENSGMOG00000002546)	ENSGMOG00000033195	ENSGMOG00000025033	ENSGMOG00000029194
Euacanthomorphacea	ANCESTRAL SPECIES	16	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000182355	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Pinecone sodierfish	MODERN SPECIES	12	slc35g2b (ENSMMDG00005014833)	NCK1 (ENSMMDG00005014828)	bdh1 (ENSMMDG00005014824)	gyg1b (ENSMMDG00005014823)	cpb1 (ENSMMDG00005014820)	AGTR1 (ENSMMDG00005014819)	zic1 (ENSMMDG00005014818)	zic4 (ENSMMDG00005014816)	ENSMMDG00005014813	plod2 (ENSMMDG00005014786) #36	dipk2ab (ENSMMDG00005014766) #25	SLC9A9 (ENSMMDG00005014761) #24	CHST2 (ENSMMDG00005014757) #23	trpc1 (ENSMMDG00005014745) #19	pcolce2b (ENSMMDG00005014736) #20	u2surp (ENSMMDG00005013959) #22	ackr4b (ENSMMDG00005013941)	acad11 (ENSMMDG00005012190)	uba5 (ENSMMDG00005012121)	ENSMMDG00005012116	ENSMMDG00005012108	ENSMMDG00005012106	tgif1 (ENSMMDG00005012105)	DLGAP1 (ENSMMDG00005010891)	htr5ab (ENSMMDG00005010883)	insig1 (ENSMMDG00005010880)	en2a (ENSMMDG00005010878)	RBM33 (ENSMMDG00005010875)	shha (ENSMMDG00005010872)	rnf32 (ENSMMDG00005010870)	lmbr1 (ENSMMDG00005010829)
Percomorphaceae	ANCESTRAL SPECIES	24	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000182355	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Percomorphaceae_B	ANCESTRAL SPECIES	20	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000182355	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Percomorphaceae_C	ANCESTRAL SPECIES	21	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000182355	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Percomorphaceae_D	ANCESTRAL SPECIES	21	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000182355	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Carangaria	ANCESTRAL SPECIES	21	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000182355	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Carangaria_A	ANCESTRAL SPECIES	15	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Seriola	ANCESTRAL SPECIES	27	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000164635	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a
Greater amberjack	MODERN SPECIES	217				gyg1b (ENSSDUG00000005594)	cpb1 (ENSSDUG00000005637)	AGTR1 (ENSSDUG00000005676)	zic1 (ENSSDUG00000005680)	zic4 (ENSSDUG00000005702)	ENSSDUG00000005712	plod2 (ENSSDUG00000005733) #36	dipk2ab (ENSSDUG00000005818) #25	SLC9A9 (ENSSDUG00000005834) #24	CHST2 (ENSSDUG00000005866) #23	trpc1 (ENSSDUG00000005892) #19	pcolce2b (ENSSDUG00000005953) #20	u2surp (ENSSDUG00000006136) #22	acad11 (ENSSDUG00000006341)	ackr4b (ENSSDUG00000006395)	uba5 (ENSSDUG00000006405)	nphp3 (ENSSDUG00000006427)	ENSSDUG00000006491	ENSSDUG00000006516	ENSSDUG00000006636	tgif1 (ENSSDUG00000006649)	DLGAP1 (ENSSDUG00000006673)	htr5ab (ENSSDUG00000006689)	insig1 (ENSSDUG00000006701)	en2a (ENSSDUG00000006720)	ENSSDUG00000006739	shha (ENSSDUG00000006770)	rnf32 (ENSSDUG00000006783)
Yellowtail amberjack	MODERN SPECIES	3001											dipk2ab (ENSSLDG00000022834) #25	ENSSLDG00000022560 #24	CHST2 (ENSSLDG00000022514) #23	trpc1 (ENSSLDG00000022474) #19	pcolce2b (ENSSLDG00000022447) #20	u2surp (ENSSLDG00000022385) #22	ackr4b (ENSSLDG00000022372)	ENSSLDG00000022254	uba5 (ENSSLDG00000022220)	nphp3 (ENSSLDG00000022183)	ENSSLDG00000022170	ENSSLDG00000022096	ENSSLDG00000022077	tgif1 (ENSSLDG00000022071)	DLGAP1 (ENSSLDG00000022045)	htr5ab (ENSSLDG00000022034)	insig1 (ENSSLDG00000022011)	en2a (ENSSLDG00000022001)	ENSSLDG00000021965	shha (ENSSLDG00000021952)	rnf32 (ENSSLDG00000021888)
Barramundi perch	MODERN SPECIES	47	slc35g2b (ENSLCAG00010010143)	NCK1 (ENSLCAG00010010142)	bdh1 (ENSLCAG00010010140)	gyg1b (ENSLCAG00010010137)	cpb1 (ENSLCAG00010010131)	AGTR1 (ENSLCAG00010010122)	zic1 (ENSLCAG00010010119)	zic4 (ENSLCAG00010010115)	ENSLCAG00010010107	plod2 (ENSLCAG00010009358) #36	dipk2ab (ENSLCAG00010009218) #25	SLC9A9 (ENSLCAG00010009206) #24	CHST2 (ENSLCAG00010009204) #23	trpc1 (ENSLCAG00010009131) #19	pcolce2b (ENSLCAG00010009120) #20	u2surp (ENSLCAG00010008808) #22	ackr4b (ENSLCAG00010008720)	acad11 (ENSLCAG00010008341)	uba5 (ENSLCAG00010008144)	nphp3 (ENSLCAG00010008052)	CEP120 (ENSLCAG00010007992)	ZNF608 (ENSLCAG00010007977)	GRAMD2B (ENSLCAG00010007966)	ENSLCAG00010007962	ENSLCAG00010007956	ENSLCAG00010007954	ENSLCAG00010007952	ENSLCAG00010007950	ENSLCAG00010007945	ENSLCAG00010007944	SLC12A2 (ENSLCAG00010007623)
Pleuronectoidei	ANCESTRAL SPECIES	12	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000182355	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Tongue sole	MODERN SPECIES	13	tagln3b (ENSCSEG00000014898)	tagln3a (ENSCSEG00000014904)	c1qtnf9 (ENSCSEG00000014906)	ENSCSEG00000014915	ENSCSEG00000014923	ENSCSEG00000014938	ENSCSEG00000014944	ENSCSEG00000014950	flt1 (ENSCSEG00000014959)	ENSCSEG00000014990	plod2 (ENSCSEG00000015021) #36	dipk2ab (ENSCSEG00000015087) #25	CHST2 (ENSCSEG00000015090) #23	trpc1 (ENSCSEG00000015097) #19	pcolce2b (ENSCSEG00000015120) #20	u2surp (ENSCSEG00000015150) #22	irf9 (ENSCSEG00000015254)	ENSCSEG00000015262	psme2 (ENSCSEG00000015276)	lsm5 (ENSCSEG00000015286)	ENSCSEG00000015295	ENSCSEG00000015303	eif1axb (ENSCSEG00000015312)	rps6ka3b (ENSCSEG00000015334)	pdha1b (ENSCSEG00000015446)	acot9.2 (ENSCSEG00000015508)	SAT1 (ENSCSEG00000015551)	apoob (ENSCSEG00000015570)	ENSCSEG00000015582	klhl15 (ENSCSEG00000015599)	eif2s3 (ENSCSEG00000015632)
Turbot	MODERN SPECIES	13	slc35g2b (ENSSMAG00000013109)	ENSSMAG00000012993	bdh1 (ENSSMAG00000034427)	gyg1b (ENSSMAG00000012944)	cpb1 (ENSSMAG00000012888)	AGTR1 (ENSSMAG00000012881)	zic1 (ENSSMAG00000012869)	zic4 (ENSSMAG00000012856)	ENSSMAG00000012845	plod2 (ENSSMAG00000012723) #36	dipk2ab (ENSSMAG00000012685) #25	SLC9A9 (ENSSMAG00000012633) #24	CHST2 (ENSSMAG00000012627) #23	trpc1 (ENSSMAG00000012577) #19	pcolce2b (ENSSMAG00000012554) #20	U2SURP (ENSSMAG00000012475) #22	ACKR4 (ENSSMAG00000012469)	ACAD11 (ENSSMAG00000012381)	uba5 (ENSSMAG00000012314)	nphp3 (ENSSMAG00000012259)	ENSSMAG00000036433	ENSSMAG00000012090	tgif1 (ENSSMAG00000012077)	ENSSMAG00000012051	htr5ab (ENSSMAG00000010887)	insig1 (ENSSMAG00000010907)	en2a (ENSSMAG00000010933)	RBM33 (ENSSMAG00000010943)	shha (ENSSMAG00000010967)	rnf32 (ENSSMAG00000010975)	lmbr1 (ENSSMAG00000010987)
Anabantaria	ANCESTRAL SPECIES	22	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Zig-zag eel	MODERN SPECIES	12	ENSMAMG00000002468	slc35g2b (ENSMAMG00000002493)	ENSMAMG00000002509	bdh1 (ENSMAMG00000002524)	gyg1b (ENSMAMG00000002541)	cpb1 (ENSMAMG00000002592)	AGTR1 (ENSMAMG00000002624)	zic1 (ENSMAMG00000002634)	zic4 (ENSMAMG00000002664)	ENSMAMG00000002672	plod2 (ENSMAMG00000002720) #36	dipk2ab (ENSMAMG00000002858) #25	CHST2 (ENSMAMG00000002890) #23	trpc1 (ENSMAMG00000002921) #19	pcolce2b (ENSMAMG00000002967) #20	U2SURP (ENSMAMG00000003004) #22	ACAD11 (ENSMAMG00000003173)	ACKR4 (ENSMAMG00000003422)	uba5 (ENSMAMG00000003437)	nphp3 (ENSMAMG00000003466)	ENSMAMG00000003561	ENSMAMG00000003575	ENSMAMG00000003703	tgif1 (ENSMAMG00000003708)	ENSMAMG00000003718	htr5ab (ENSMAMG00000003749)	insig1 (ENSMAMG00000003761)	en2a (ENSMAMG00000003793)	ENSMAMG00000003808	shha (ENSMAMG00000003867)	rnf32 (ENSMAMG00000003885)
Anabantoidei	ANCESTRAL SPECIES	20	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Siamese fighting fish	MODERN SPECIES	15	slc35g2b (ENSBSLG00000004821)	NCK1 (ENSBSLG00000004829)	bdh1 (ENSBSLG00000004843)	gyg1b (ENSBSLG00000004860)	cpb1 (ENSBSLG00000004952)	AGTR1 (ENSBSLG00000005138)	zic1 (ENSBSLG00000005169)	zic4 (ENSBSLG00000005192)	ENSBSLG00000005238	plod2 (ENSBSLG00000005775) #36	dipk2ab (ENSBSLG00000008871) #25	SLC9A9 (ENSBSLG00000008879) #24	CHST2 (ENSBSLG00000008929) #23	trpc1 (ENSBSLG00000008993) #19	pcolce2b (ENSBSLG00000009239) #20	u2surp (ENSBSLG00000009395) #22	acad11 (ENSBSLG00000011006)	ackr4b (ENSBSLG00000011487)	uba5 (ENSBSLG00000011490)	nphp3 (ENSBSLG00000011516)	ENSBSLG00000012405	KIAA1217 (ENSBSLG00000000568)	ENSBSLG00000000695	tgif1 (ENSBSLG00000000697)	DLGAP1 (ENSBSLG00000000738)	htr5ab (ENSBSLG00000001206)	insig1 (ENSBSLG00000001232)	en2a (ENSBSLG00000001248)	RBM33 (ENSBSLG00000001275)	shha (ENSBSLG00000001307)	rnf32 (ENSBSLG00000001314)
Climbing perch	MODERN SPECIES	11	slc35g2b (ENSATEG00000007003)	ENSATEG00000006985	bdh1 (ENSATEG00000006964)	gyg1b (ENSATEG00000006946)	cpb1 (ENSATEG00000006905)	AGTR1 (ENSATEG00000006900)	zic1 (ENSATEG00000006702)	zic4 (ENSATEG00000006678)	ENSATEG00000026408	plod2 (ENSATEG00000006579) #36	dipk2ab (ENSATEG00000006549) #25	SLC9A9 (ENSATEG00000006532) #24	CHST2 (ENSATEG00000006518) #23	trpc1 (ENSATEG00000006446) #19	pcolce2b (ENSATEG00000006332) #20	U2SURP (ENSATEG00000006321) #22	ACKR4 (ENSATEG00000006308)	ACAD11 (ENSATEG00000006297)	uba5 (ENSATEG00000006252)	nphp3 (ENSATEG00000006119)	ENSATEG00000006086	ENSATEG00000006030	ENSATEG00000026723	tgif1 (ENSATEG00000005965)	ENSATEG00000005910	htr5ab (ENSATEG00000005887)	insig1 (ENSATEG00000028817)	en2a (ENSATEG00000027474)	RBM33 (ENSATEG00000005820)	shha (ENSATEG00000025820)	rnf32 (ENSATEG00000005689)
Eupercaria	ANCESTRAL SPECIES	20	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Tetraodontidae	ANCESTRAL SPECIES	18	ENSGT00390000008686.c.d	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Fugu	MODERN SPECIES	1	ENSTRUG00000022307	slc35g2b (ENSTRUG00000017727)	NCK1 (ENSTRUG00000017728)	bdh1 (ENSTRUG00000017729)	gyg1b (ENSTRUG00000017735)	cpb1 (ENSTRUG00000017742)	AGTR1 (ENSTRUG00000017757)	zic1 (ENSTRUG00000017760)	zic4 (ENSTRUG00000017765)	ENSTRUG00000017774	plod2 (ENSTRUG00000017777) #36	dipk2ab (ENSTRUG00000017793) #25	CHST2 (ENSTRUG00000023815) #23	trpc1 (ENSTRUG00000017798) #19	pcolce2b (ENSTRUG00000017807) #20	u2surp (ENSTRUG00000017810) #22	acad11 (ENSTRUG00000022835)	ackr4b (ENSTRUG00000017829)	uba5 (ENSTRUG00000017830)	nphp3 (ENSTRUG00000017819)	ENSTRUG00000017838	KIAA1217 (ENSTRUG00000017841)	ENSTRUG00000017846	tgif1 (ENSTRUG00000020687)	DLGAP1 (ENSTRUG00000017849)	htr5ab (ENSTRUG00000017860)	insig1 (ENSTRUG00000017863)	en2a (ENSTRUG00000017873)	RBM33 (ENSTRUG00000025359)	shha (ENSTRUG00000025705)	rnf32 (ENSTRUG00000010576)
Tetraodon	MODERN SPECIES	21	ENSTNIG00000012750	ENSTNIG00000012751	NCK1 (ENSTNIG00000012753)	bdh1 (ENSTNIG00000012754)	gyg1b (ENSTNIG00000012755)	cpb1 (ENSTNIG00000012756)	AGTR1 (ENSTNIG00000012757)	zic1 (ENSTNIG00000012758)	zic4 (ENSTNIG00000012759)	ENSTNIG00000012760	plod2 (ENSTNIG00000012762) #36	itga9 (ENSTNIG00000012761)	dipk2ab (ENSTNIG00000012763) #25	trpc1 (ENSTNIG00000012765) #19	pcolce2b (ENSTNIG00000012766) #20	u2surp (ENSTNIG00000012767) #22	ackr4b (ENSTNIG00000000194)	uba5 (ENSTNIG00000012768)	nphp3 (ENSTNIG00000012769)	ENSTNIG00000012770	KIAA1217 (ENSTNIG00000012771)	OTUD1 (ENSTNIG00000012772)	tgif1 (ENSTNIG00000012773)	DLGAP1 (ENSTNIG00000012774)	htr5ab (ENSTNIG00000012775)	insig1 (ENSTNIG00000012776)	en2a (ENSTNIG00000012777)	ENSTNIG00000012778	ENSTNIG00000012779	shha (ENSTNIG00000012780)	rnf32 (ENSTNIG00000012781)
Eupecaria_A	ANCESTRAL SPECIES	19	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Eupecaria_B	ANCESTRAL SPECIES	19	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Eupecaria_C	ANCESTRAL SPECIES	19	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	17	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
European seabass	MODERN SPECIES	8	ENSDLAG00005008701	TMEM22 (ENSDLAG00005033515)	NCK1 (ENSDLAG00005030071)	gyg1b (ENSDLAG00005008737)	cpb1 (ENSDLAG00005008791)	zic1 (ENSDLAG00005008883)	zic4 (ENSDLAG00005027916)	ENSDLAG00005032171	PLOD2 (ENSDLAG00005009017) #36	dipk2ab (ENSDLAG00005009352) #25	SLC9A9 (ENSDLAG00005009359) #24	CHST2 (ENSDLAG00005009391) #23	trpc1 (ENSDLAG00005009394) #19	pcolce2b (ENSDLAG00005009402) #20	ACAD11 (ENSDLAG00005009448)	ENSDLAG00005009833 #22	CCRL1A (ENSDLAG00005033569)	UBA5 (ENSDLAG00005010563)	NPHP3 (ENSDLAG00005010863)	ENSDLAG00005011090	ENSDLAG00005011100	ENSDLAG00005011208	tgif1 (ENSDLAG00005028645)	ENSDLAG00005011220	htr5ab (ENSDLAG00005011430)	INSIG1 (ENSDLAG00005011438)	en2a (ENSDLAG00005030214)	RBM33 (ENSDLAG00005011462)	shha (ENSDLAG00005011469)	lmbr1 (ENSDLAG00005011502)	nom1 (ENSDLAG00005011665)
Large yellow croaker	MODERN SPECIES	494	slc35g2b (ENSLCRG00005018815)	NCK1 (ENSLCRG00005018814)	bdh1 (ENSLCRG00005018813)	gyg1b (ENSLCRG00005018805)	cpb1 (ENSLCRG00005018788)	AGTR1 (ENSLCRG00005018786)	zic1 (ENSLCRG00005018785)	zic4 (ENSLCRG00005018783)	ENSLCRG00005018782	plod2 (ENSLCRG00005012767) #36	dipk2ab (ENSLCRG00005012698) #25	SLC9A9 (ENSLCRG00005012694) #24	CHST2 (ENSLCRG00005012693) #23	trpc1 (ENSLCRG00005012627) #19	pcolce2b (ENSLCRG00005012585) #20	u2surp (ENSLCRG00005012549) #22	ackr4b (ENSLCRG00005023248)	acad11 (ENSLCRG00005023156)	uba5 (ENSLCRG00005023126)	nphp3 (ENSLCRG00005023116)	ENSLCRG00005023114	ENSLCRG00005023094	ENSLCRG00005023086	tgif1 (ENSLCRG00005023084)	ENSLCRG00005023083	DLGAP1 (ENSLCRG00005023061)	htr5ab (ENSLCRG00005023060)	insig1 (ENSLCRG00005023059)	en2a (ENSLCRG00005023058)	RBM33 (ENSLCRG00005023057)	shha (ENSLCRG00005023055)
Gilthead seabream	MODERN SPECIES	10	ENSSAUG00010021839	slc35g2b (ENSSAUG00010021838)	NCK1 (ENSSAUG00010021837)	bdh1 (ENSSAUG00010021834)	gyg1b (ENSSAUG00010021832)	cpb1 (ENSSAUG00010021806)	zic1 (ENSSAUG00010021798)	zic4 (ENSSAUG00010021791)	ENSSAUG00010021788	plod2 (ENSSAUG00010016232) #36	dipk2ab (ENSSAUG00010016141) #25	SLC9A9 (ENSSAUG00010016137) #24	CHST2 (ENSSAUG00010016134) #23	trpc1 (ENSSAUG00010016036) #19	pcolce2b (ENSSAUG00010015811) #20	u2surp (ENSSAUG00010015790) #22	CCR11 (ENSSAUG00010015782)	acad11 (ENSSAUG00010013683)	uba5 (ENSSAUG00010013645)	nphp3 (ENSSAUG00010013640)	ENSSAUG00010013633	ENSSAUG00010013626	tgif1 (ENSSAUG00010013625)	DLGAP1 (ENSSAUG00010013463)	htr5ab (ENSSAUG00010013444)	insig1 (ENSSAUG00010013442)	en2a (ENSSAUG00010013440)	ENSSAUG00010013437	shha (ENSSAUG00010013434)	rnf32 (ENSSAUG00010013431)	lmbr1 (ENSSAUG00010013242)
Perciformes	ANCESTRAL SPECIES	21	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Cottioidei	ANCESTRAL SPECIES	21	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Stickleback	MODERN SPECIES	20	ENSGACG00000003604	slc35g2b (ENSGACG00000003606)	NCK1 (ENSGACG00000003608)	bdh1 (ENSGACG00000003614)	gyg1b (ENSGACG00000003621)	cpb1 (ENSGACG00000003626)	AGTR1 (ENSGACG00000003676)	zic1 (ENSGACG00000003678)	zic4 (ENSGACG00000003685)	ENSGACG00000003687	plod2 (ENSGACG00000003693) #36	dipk2ab (ENSGACG00000003735) #25	CHST2 (ENSGACG00000003738) #23	trpc1 (ENSGACG00000003740) #19	pcolce2b (ENSGACG00000003756) #20	u2surp (ENSGACG00000003763) #22	acad11 (ENSGACG00000003774)	ackr4b (ENSGACG00000003814)	uba5 (ENSGACG00000003816)	nphp3 (ENSGACG00000003823)	ENSGACG00000003837	KIAA1217 (ENSGACG00000003838)	OTUD1 (ENSGACG00000003846)	DLGAP1 (ENSGACG00000003847)	ENSGACG00000003857	htr5ab (ENSGACG00000003858)	insig1 (ENSGACG00000003865)	en2a (ENSGACG00000003888)	ENSGACG00000003889	ENSGACG00000003891	shha (ENSGACG00000003893)
Lumpfish	MODERN SPECIES	12	slc35g2b (ENSCLMG00005019651)	NCK1 (ENSCLMG00005019650)	bdh1 (ENSCLMG00005019649)	gyg1b (ENSCLMG00005019646)	cpb1 (ENSCLMG00005019643)	AGTR1 (ENSCLMG00005019642)	zic1 (ENSCLMG00005019641)	zic4 (ENSCLMG00005019640)	ENSCLMG00005019639	plod2 (ENSCLMG00005011841) #36	dipk2ab (ENSCLMG00005011788) #25	SLC9A9 (ENSCLMG00005011786) #24	CHST2 (ENSCLMG00005011785) #23	trpc1 (ENSCLMG00005011778) #19	pcolce2b (ENSCLMG00005011776) #20	u2surp (ENSCLMG00005009769) #22	ackr4b (ENSCLMG00005009762)	acad11 (ENSCLMG00005008776)	uba5 (ENSCLMG00005008750)	nphp3 (ENSCLMG00005008747)	ENSCLMG00005022236	ENSCLMG00005022235	tgif1 (ENSCLMG00005022234)	DLGAP1 (ENSCLMG00005022174)	htr5ab (ENSCLMG00005022165)	insig1 (ENSCLMG00005022163)	en2a (ENSCLMG00005022162)	ENSCLMG00005022161	shha (ENSCLMG00005022160)	rnf32 (ENSCLMG00005022159)	lmbr1 (ENSCLMG00005022138)
Perciformes_a	ANCESTRAL SPECIES	22	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Channel bull blenny	MODERN SPECIES	12	slc35g2b (ENSCGOG00000020489)	NCK1 (ENSCGOG00000020490)	bdh1 (ENSCGOG00000020495)	gyg1b (ENSCGOG00000020497)	cpb1 (ENSCGOG00000020513)	AGTR1 (ENSCGOG00000020598)	zic1 (ENSCGOG00000020600)	zic4 (ENSCGOG00000020604)	ENSCGOG00000020605	plod2 (ENSCGOG00000020724) #36	dipk2ab (ENSCGOG00000022562) #25	SLC9A9 (ENSCGOG00000022565) #24	CHST2 (ENSCGOG00000022571) #23	trpc1 (ENSCGOG00000022576) #19	pcolce2b (ENSCGOG00000022663) #20	u2surp (ENSCGOG00000022700) #22	acad11 (ENSCGOG00000023054)	ackr4b (ENSCGOG00000023143)	uba5 (ENSCGOG00000023152)	nphp3 (ENSCGOG00000023209)	ENSCGOG00000023250	ENSCGOG00000023254	ENSCGOG00000023262	ENSCGOG00000023266	DLGAP1 (ENSCGOG00000002386)	htr5ab (ENSCGOG00000002495)	insig1 (ENSCGOG00000002498)	en2a (ENSCGOG00000002509)	ENSCGOG00000002514	shha (ENSCGOG00000002520)	rnf32 (ENSCGOG00000002524)
Pike perch	MODERN SPECIES	197				gyg1b (ENSSLUG00000024220)	cpb1 (ENSSLUG00000024210)	AGTR1 (ENSSLUG00000024207)	zic1 (ENSSLUG00000024204)	zic4 (ENSSLUG00000024201)	ENSSLUG00000024194	plod2 (ENSSLUG00000020982) #36	dipk2ab (ENSSLUG00000020787) #25	SLC9A9 (ENSSLUG00000020779) #24	CHST2 (ENSSLUG00000020776) #23	trpc1 (ENSSLUG00000020768) #19	pcolce2b (ENSSLUG00000020764) #20	u2surp (ENSSLUG00000020069) #22	ackr4b (ENSSLUG00000020036)	acad11 (ENSSLUG00000019867)	uba5 (ENSSLUG00000019556)	nphp3 (ENSSLUG00000019530)	ENSSLUG00000019518	ENSSLUG00000019216	ENSSLUG00000019194	tgif1 (ENSSLUG00000019190)	DLGAP1 (ENSSLUG00000018955)	htr5ab (ENSSLUG00000018922)
Ballan wrasse	MODERN SPECIES	411											dipk2ab (ENSLBEG00000027111) #25	ENSLBEG00000026714 #24	CHST2 (ENSLBEG00000026459) #23	trpc1 (ENSLBEG00000026442) #19	pcolce2b (ENSLBEG00000026413) #20	u2surp (ENSLBEG00000026284) #22	ackr4b (ENSLBEG00000026206)	acad11 (ENSLBEG00000026175)	uba5 (ENSLBEG00000026148)	nphp3 (ENSLBEG00000026093)	ENSLBEG00000026070	KIAA1217 (ENSLBEG00000025978)	OTUD1 (ENSLBEG00000025942)	tgif1 (ENSLBEG00000025930)	ENSLBEG00000025911
Ovalentaria	ANCESTRAL SPECIES	21	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Atherinomorphae	ANCESTRAL SPECIES	19	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000164635	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a
Cyprinodontiformes	ANCESTRAL SPECIES	20	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Aplocheiloidei	ANCESTRAL SPECIES	18	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Mangrove rivulus	MODERN SPECIES	7	slc35g2b (ENSKMAG00000011557)	NCK1 (ENSKMAG00000011568)	bdh1 (ENSKMAG00000011581)	gyg1b (ENSKMAG00000011607)	cpb1 (ENSKMAG00000011653)	AGTR1 (ENSKMAG00000011672)	zic1 (ENSKMAG00000011689)	ENSKMAG00000011705	ENSKMAG00000011727	plod2 (ENSKMAG00000011768) #36	dipk2ab (ENSKMAG00000011842) #25	SLC9A9 (ENSKMAG00000011867) #24	CHST2 (ENSKMAG00000011898) #23	trpc1 (ENSKMAG00000011936) #19	pcolce2b (ENSKMAG00000012021) #20	u2surp (ENSKMAG00000012083) #22	acad11 (ENSKMAG00000012184)	ackr4b (ENSKMAG00000012223)	uba5 (ENSKMAG00000012251)	nphp3 (ENSKMAG00000012309)	ENSKMAG00000012381	ENSKMAG00000012406	ENSKMAG00000012444	tgif1 (ENSKMAG00000012452)	DLGAP1 (ENSKMAG00000012484)	htr5ab (ENSKMAG00000012536)	insig1 (ENSKMAG00000012561)	en2a (ENSKMAG00000012593)	ENSKMAG00000012618	shha (ENSKMAG00000012655)	rnf32 (ENSKMAG00000012674)
Turquoise killifish	MODERN SPECIES	1617	ENSNFUG00015020110	ZIC1 (ENSNFUG00015020105)	zic4 (ENSNFUG00015020101)	PLSCR1 (ENSNFUG00015020096)	PLOD2 (ENSNFUG00015011496) #36	ENSNFUG00015011003	ENSNFUG00015010998	ENSNFUG00015010996	ENSNFUG00015010991	nmt2 (ENSNFUG00015010976)	C3ORF58 (ENSNFUG00015010966) #25	SLC9A9 (ENSNFUG00015010934) #24	CHST2 (ENSNFUG00015010924) #23	TRPC1 (ENSNFUG00015010853) #19	pcolce2b (ENSNFUG00015010794) #20	U2SURP (ENSNFUG00015010506) #22	ENSNFUG00015010484	ENSNFUG00015010481	HECW1 (ENSNFUG00015009820)	ENSNFUG00015009729	VOPP1 (ENSNFUG00015009725)	lancl2 (ENSNFUG00015009679)	ENSNFUG00015009663	BAMBIA (ENSNFUG00015009648)	ENSNFUG00015009095	ENSNFUG00015009082	ENSNFUG00015009069	aoc1 (ENSNFUG00015009046)	ENSNFUG00015009003	ENSNFUG00015007851	zeb2a (ENSNFUG00015007743)
Cyprinodontoidei	ANCESTRAL SPECIES	27	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Poeciliinae	ANCESTRAL SPECIES	20	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Poecilia	ANCESTRAL SPECIES	17	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000007809.b
NAME_6	ANCESTRAL SPECIES	22	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000007809.b
Amazon molly	MODERN SPECIES	322	bdh1 (ENSPFOG00000013869)	gyg1b (ENSPFOG00000013901)	cpb1 (ENSPFOG00000024823)	AGTR1 (ENSPFOG00000020905)	ENSPFOG00000013971	zic1 (ENSPFOG00000013981)	zic4 (ENSPFOG00000014007)	ENSPFOG00000014059	plod2 (ENSPFOG00000014071) #36	dipk2ab (ENSPFOG00000014242) #25	SLC9A9 (ENSPFOG00000014256) #24	CHST2 (ENSPFOG00000020906) #23	trpc1 (ENSPFOG00000014387) #19	CHST2 (ENSPFOG00000020907) #23	pcolce2b (ENSPFOG00000014427) #20	u2surp (ENSPFOG00000014489) #22	acad11 (ENSPFOG00000014717)	ackr4b (ENSPFOG00000020908)	uba5 (ENSPFOG00000014892)	nphp3 (ENSPFOG00000014991)	ENSPFOG00000015120	ENSPFOG00000015234	ENSPFOG00000020909	tgif1 (ENSPFOG00000015236)	DLGAP1 (ENSPFOG00000015242)	ENSPFOG00000015303	htr5ab (ENSPFOG00000015321)	insig1 (ENSPFOG00000015325)	en2a (ENSPFOG00000015347)	ENSPFOG00000015364	shha (ENSPFOG00000015445)
Sailfin molly	MODERN SPECIES	937													CHST2 (ENSPLAG00000006934) #23	trpc1 (ENSPLAG00000006910) #19	pcolce2b (ENSPLAG00000006877) #20	u2surp (ENSPLAG00000006816) #22	acad11 (ENSPLAG00000006633)	ackr4b (ENSPLAG00000006558)	uba5 (ENSPLAG00000006551)	nphp3 (ENSPLAG00000006511)	ENSPLAG00000006435	ENSPLAG00000006428	ENSPLAG00000006412	ENSPLAG00000006389
Guppy	MODERN SPECIES	451	riok3 (ENSPREG00000010010)	ENSPREG00000009999	CLVS1 (ENSPREG00000009978)	ENSPREG00000009816	ENSPREG00000009768	ENSPREG00000009758	ENSPREG00000009709	ENSPREG00000009676	ENSPREG00000009643	plod2 (ENSPREG00000009580) #36	dipk2ab (ENSPREG00000009547) #25	SLC9A9 (ENSPREG00000009525) #24	CHST2 (ENSPREG00000009509) #23	trpc1 (ENSPREG00000009469) #19	pcolce2b (ENSPREG00000009420) #20	u2surp (ENSPREG00000009325) #22	ackr4b (ENSPREG00000009302)	acad11 (ENSPREG00000009273)	uba5 (ENSPREG00000009230)	nphp3 (ENSPREG00000009187)	ENSPREG00000009170	ENSPREG00000009159	ENSPREG00000009151	ENSPREG00000009145	ENSPREG00000009141	tgif1 (ENSPREG00000009131)	DLGAP1 (ENSPREG00000009076)	htr5ab (ENSPREG00000009048)	insig1 (ENSPREG00000009030)	ENSPREG00000008993	shha (ENSPREG00000008962)
Platyfish	MODERN SPECIES	13	ENSXMAG00000009210	slc35g2b (ENSXMAG00000020156)	NCK1 (ENSXMAG00000029896)	bdh1 (ENSXMAG00000009195)	gyg1b (ENSXMAG00000009188)	cpb1 (ENSXMAG00000009168)	AGTR1 (ENSXMAG00000020155)	zic1 (ENSXMAG00000029482)	zic4 (ENSXMAG00000009162)	ENSXMAG00000009159	plod2 (ENSXMAG00000009123) #36	dipk2ab (ENSXMAG00000029512) #25	CHST2 (ENSXMAG00000020056) #23	trpc1 (ENSXMAG00000002645) #19	pcolce2b (ENSXMAG00000002628) #20	u2surp (ENSXMAG00000002608) #22	ackr4b (ENSXMAG00000020055)	acad11 (ENSXMAG00000002591)	uba5 (ENSXMAG00000002572)	nphp3 (ENSXMAG00000002552)	ENSXMAG00000020054	ENSXMAG00000002535	ENSXMAG00000020053	tgif1 (ENSXMAG00000025259)	DLGAP1 (ENSXMAG00000002511)	htr5ab (ENSXMAG00000022057)	insig1 (ENSXMAG00000002501)	en2a (ENSXMAG00000002496)	ENSXMAG00000002488	shha (ENSXMAG00000024356)	ENSXMAG00000028484
NAME_4	ANCESTRAL SPECIES	38	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000007809.b
Mummichog	MODERN SPECIES	528					AGTR1 (ENSFHEG00000017333)	ENSFHEG00000017328	zic1 (ENSFHEG00000017308)	zic4 (ENSFHEG00000017296)	ENSFHEG00000017276	plod2 (ENSFHEG00000017237) #36	dipk2ab (ENSFHEG00000017172) #25	SLC9A9 (ENSFHEG00000017158) #24	CHST2 (ENSFHEG00000017120) #23	trpc1 (ENSFHEG00000017107) #19	pcolce2b (ENSFHEG00000017009) #20	u2surp (ENSFHEG00000016966) #22	acad11 (ENSFHEG00000016938)	ackr4b (ENSFHEG00000016909)	uba5 (ENSFHEG00000016904)	nphp3 (ENSFHEG00000016846)	ENSFHEG00000016490	ENSFHEG00000016470	ENSFHEG00000016458	ENSFHEG00000016445	OTUD1 (ENSFHEG00000016438)	tgif1 (ENSFHEG00000016432)	DLGAP1 (ENSFHEG00000016417)	htr5ab (ENSFHEG00000016185)	insig1 (ENSFHEG00000016170)	en2a (ENSFHEG00000016151)	ENSFHEG00000016130
Sheepshead minnow	MODERN SPECIES	602													CHST2 (ENSCVAG00000003027) #23	trpc1 (ENSCVAG00000003014) #19	pcolce2b (ENSCVAG00000002989) #20	u2surp (ENSCVAG00000002961) #22	acad11 (ENSCVAG00000002900)	ackr4b (ENSCVAG00000002846)	uba5 (ENSCVAG00000002839)	nphp3 (ENSCVAG00000002811)	ENSCVAG00000002781	KIAA1217 (ENSCVAG00000002769)	OTUD1 (ENSCVAG00000002712)	tgif1 (ENSCVAG00000002708)	DLGAP1 (ENSCVAG00000002696)	htr5ab (ENSCVAG00000002681)	insig1 (ENSCVAG00000002676)	en2a (ENSCVAG00000002672)
Oryzias	ANCESTRAL SPECIES	18	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000164635	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a
Oryzias_a	ANCESTRAL SPECIES	16	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759	ENSGT00390000007809.b
Japanese Medaka HdrR	MODERN SPECIES	12	slc35g2b (ENSORLG00000009906)	NCK1 (ENSORLG00000009923)	bdh1 (ENSORLG00000009948)	gyg1b (ENSORLG00000009975)	cpb1 (ENSORLG00000010032)	AGTR1 (ENSORLG00000010042)	zic1 (ENSORLG00000010050)	zic4 (ENSORLG00000010055)	ENSORLG00000024005	plod2 (ENSORLG00000010111) #36	dipk2ab (ENSORLG00000027166) #25	SLC9A9 (ENSORLG00000021970) #24	CHST2 (ENSORLG00000010131) #23	trpc1 (ENSORLG00000010171) #19	pcolce2b (ENSORLG00000010197) #20	u2surp (ENSORLG00000010235) #22	acad11 (ENSORLG00000010243)	ackr4b (ENSORLG00000010254)	uba5 (ENSORLG00000010294)	nphp3 (ENSORLG00000010314)	KIAA1217 (ENSORLG00000010340)	ENSORLG00000026921	tgif1 (ENSORLG00000027364)	DLGAP1 (ENSORLG00000010388)	htr5ab (ENSORLG00000025245)	ENSORLG00000022479	insig1 (ENSORLG00000010423)	en2a (ENSORLG00000010437)	ENSORLG00000010456	shha (ENSORLG00000010463)	rnf32 (ENSORLG00000010475)
Chinese medaka	MODERN SPECIES	1041	slc35g2b (ENSOSIG00000006938)	NCK1 (ENSOSIG00000006937)	bdh1 (ENSOSIG00000006936)	gyg1b (ENSOSIG00000006935)	cpb1 (ENSOSIG00000006883)	AGTR1 (ENSOSIG00000006881)	zic1 (ENSOSIG00000006864)	zic4 (ENSOSIG00000006861)	ENSOSIG00000006852	plod2 (ENSOSIG00000005985) #36	dipk2ab (ENSOSIG00000005976) #25	SLC9A9 (ENSOSIG00000005966) #24	CHST2 (ENSOSIG00000005963) #23	trpc1 (ENSOSIG00000005961) #19	pcolce2b (ENSOSIG00000005888) #20	u2surp (ENSOSIG00000005822) #22	ackr4b (ENSOSIG00000005816)	acad11 (ENSOSIG00000005803)	uba5 (ENSOSIG00000005393)	nphp3 (ENSOSIG00000005381)	ENSOSIG00000005343	ENSOSIG00000005338	tgif1 (ENSOSIG00000005337)	DLGAP1 (ENSOSIG00000005242)	htr5ab (ENSOSIG00000005237)	insig1 (ENSOSIG00000021095)
Oryzias_b	ANCESTRAL SPECIES	16	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000164635	ENSGT00940000156177	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Indian medaka	MODERN SPECIES	14	slc35g2b (ENSOMEG00000005515)	NCK1 (ENSOMEG00000005500)	bdh1 (ENSOMEG00000005468)	gyg1b (ENSOMEG00000005424)	cpb1 (ENSOMEG00000005307)	AGTR1 (ENSOMEG00000005283)	zic1 (ENSOMEG00000005271)	zic4 (ENSOMEG00000005244)	ENSOMEG00000005233	plod2 (ENSOMEG00000005197) #36	dipk2ab (ENSOMEG00000005108) #25	SLC9A9 (ENSOMEG00000005091) #24	CHST2 (ENSOMEG00000005071) #23	trpc1 (ENSOMEG00000005043) #19	pcolce2b (ENSOMEG00000004994) #20	u2surp (ENSOMEG00000004962) #22	acad11 (ENSOMEG00000004902)	ackr4b (ENSOMEG00000004884)	ENSOMEG00000004867	uba5 (ENSOMEG00000004831)	ENSOMEG00000004806	KIAA1217 (ENSOMEG00000004711)	ENSOMEG00000004512	tgif1 (ENSOMEG00000004498)	DLGAP1 (ENSOMEG00000004473)	HTR5A (ENSOMEG00000004444)	insig1 (ENSOMEG00000004418)	en2a (ENSOMEG00000004380)	ENSOMEG00000004361	shha (ENSOMEG00000004319)	rnf32 (ENSOMEG00000004304)
Ovalentaria_B	ANCESTRAL SPECIES	20	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Pomacentridae	ANCESTRAL SPECIES	11	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Pomacentridae_A	ANCESTRAL SPECIES	8	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Amphiprion	ANCESTRAL SPECIES	7	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000181016	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Clown anemonefish	MODERN SPECIES	2047													CHST2 (ENSAOCG00000003519) #23	trpc1 (ENSAOCG00000003538) #19	pcolce2b (ENSAOCG00000003551) #20	u2surp (ENSAOCG00000003589) #22	ackr4b (ENSAOCG00000003605)	acad11 (ENSAOCG00000003622)
Orange clownfish	MODERN SPECIES	14	NCK1 (ENSAPEG00000017248)	bdh1 (ENSAPEG00000017234)	gyg1b (ENSAPEG00000017210)	cpb1 (ENSAPEG00000017190)	AGTR1 (ENSAPEG00000017182)	zic1 (ENSAPEG00000017143)	zic4 (ENSAPEG00000017132)	ENSAPEG00000017122	ENSAPEG00000017115	plod2 (ENSAPEG00000017014) #36	dipk2ab (ENSAPEG00000016993) #25	SLC9A9 (ENSAPEG00000016845) #24	CHST2 (ENSAPEG00000016815) #23	pcolce2b (ENSAPEG00000016780) #20	trpc1 (ENSAPEG00000016726) #19	u2surp (ENSAPEG00000016652) #22	acad11 (ENSAPEG00000016555)	uba5 (ENSAPEG00000016490)	nphp3 (ENSAPEG00000016371)	ENSAPEG00000016339	ENSAPEG00000016317	tgif1 (ENSAPEG00000016310)	DLGAP1 (ENSAPEG00000016268)	htr5ab (ENSAPEG00000016248)	insig1 (ENSAPEG00000016227)	en2a (ENSAPEG00000016214)	ENSAPEG00000016208	ENSAPEG00000016186	shha (ENSAPEG00000016169)	rnf32 (ENSAPEG00000016124)	lmbr1 (ENSAPEG00000016028)
Spiny chromis	MODERN SPECIES	25						zic1 (ENSAPOG00000010942)	zic4 (ENSAPOG00000010956)	ENSAPOG00000010966	plod2 (ENSAPOG00000011061) #36	ENSAPOG00000000311	dipk2ab (ENSAPOG00000011108) #25	SLC9A9 (ENSAPOG00000011158) #24	CHST2 (ENSAPOG00000011185) #23	trpc1 (ENSAPOG00000011253) #19	pcolce2b (ENSAPOG00000000317) #20	u2surp (ENSAPOG00000011345) #22	ackr4b (ENSAPOG00000011367)	acad11 (ENSAPOG00000011442)	uba5 (ENSAPOG00000011497)	nphp3 (ENSAPOG00000011604)	ENSAPOG00000011619	ENSAPOG00000011635	ENSAPOG00000011667	tgif1 (ENSAPOG00000011675)	DLGAP1 (ENSAPOG00000011722)	htr5ab (ENSAPOG00000011758)	insig1 (ENSAPOG00000011784)	en2a (ENSAPOG00000011792)	ENSAPOG00000011836	ENSAPOG00000001010	shha (ENSAPOG00000011867)
Bicolor damselfish	MODERN SPECIES	1060											dipk2ab (ENSSPAG00000020297) #25	SLC9A9 (ENSSPAG00000020315) #24	CHST2 (ENSSPAG00000020337) #23	trpc1 (ENSSPAG00000020356) #19	pcolce2b (ENSSPAG00000020389) #20	u2surp (ENSSPAG00000020432) #22
Cichlidae	ANCESTRAL SPECIES	18	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000160993	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Pseudocrenilabrinae	ANCESTRAL SPECIES	20	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	19	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Lyretail cichlid	MODERN SPECIES	325	bdh1 (ENSNBRG00000017529)	gyg1b (ENSNBRG00000017513)	cpb1 (ENSNBRG00000017488)	AGTR1 (ENSNBRG00000017481)	zic1 (ENSNBRG00000017474)	zic4 (ENSNBRG00000017454)	ENSNBRG00000017440	plod2 (ENSNBRG00000017408) #36	ENSNBRG00000017398	ENSNBRG00000017392	dipk2ab (ENSNBRG00000017380) #25	ENSNBRG00000017362 #24	CHST2 (ENSNBRG00000017352) #23	trpc1 (ENSNBRG00000017334) #19	pcolce2b (ENSNBRG00000017290) #20	u2surp (ENSNBRG00000017162) #22	ackr4b (ENSNBRG00000017128)	acad11 (ENSNBRG00000017043)	uba5 (ENSNBRG00000017021)	nphp3 (ENSNBRG00000016979)	ENSNBRG00000016962	KIAA1217 (ENSNBRG00000016840)	ENSNBRG00000016814	tgif1 (ENSNBRG00000016803)	DLGAP1 (ENSNBRG00000016771)	ENSNBRG00000016758	htr5ab (ENSNBRG00000016748)	insig1 (ENSNBRG00000016730)	en2a (ENSNBRG00000016715)	ENSNBRG00000016686	shha (ENSNBRG00000016664)
Haplochromini	ANCESTRAL SPECIES	21	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Burton s mouthbrooder	MODERN SPECIES	270	bdh1 (ENSHBUG00000016069)	gyg1b (ENSHBUG00000016049)	cpb1 (ENSHBUG00000016024)	ENSHBUG00000016013	AGTR1 (ENSHBUG00000015996)	zic1 (ENSHBUG00000015990)	zic4 (ENSHBUG00000015971)	ENSHBUG00000015954	plod2 (ENSHBUG00000015944) #36	dipk2ab (ENSHBUG00000015830) #25	ENSHBUG00000015812	ENSHBUG00000015791	CHST2 (ENSHBUG00000015763) #23	trpc1 (ENSHBUG00000015757) #19	pcolce2b (ENSHBUG00000015693) #20	u2surp (ENSHBUG00000015530) #22	acad11 (ENSHBUG00000015330)	ackr4b (ENSHBUG00000015232)	uba5 (ENSHBUG00000015220)	nphp3 (ENSHBUG00000015187)	ENSHBUG00000015091	ENSHBUG00000014867	ENSHBUG00000014852	tgif1 (ENSHBUG00000014836)	DLGAP1 (ENSHBUG00000014827)	htr5ab (ENSHBUG00000014776)	insig1 (ENSHBUG00000014766)	en2a (ENSHBUG00000014756)	ENSHBUG00000014744	shha (ENSHBUG00000014721)	rnf32 (ENSHBUG00000014705)
Haplochromini_A	ANCESTRAL SPECIES	21	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
P. nyererei	MODERN SPECIES	302	bdh1 (ENSPNYG00000005851)	gyg1b (ENSPNYG00000005874)	cpb1 (ENSPNYG00000005935)	ENSPNYG00000005944	AGTR1 (ENSPNYG00000005957)	zic1 (ENSPNYG00000005972)	zic4 (ENSPNYG00000005991)	ENSPNYG00000006004	plod2 (ENSPNYG00000006024) #36	dipk2ab (ENSPNYG00000006091) #25	ENSPNYG00000006109 #24	ENSPNYG00000006133	CHST2 (ENSPNYG00000006156) #23	trpc1 (ENSPNYG00000006169) #19	pcolce2b (ENSPNYG00000006206) #20	u2surp (ENSPNYG00000006246) #22	acad11 (ENSPNYG00000006373)	ackr4b (ENSPNYG00000006435)	uba5 (ENSPNYG00000006446)	nphp3 (ENSPNYG00000006502)	ENSPNYG00000006568	KIAA1217 (ENSPNYG00000006597)	ENSPNYG00000006644	tgif1 (ENSPNYG00000006666)	DLGAP1 (ENSPNYG00000006690)	htr5ab (ENSPNYG00000006722)	insig1 (ENSPNYG00000006738)	en2a (ENSPNYG00000006771)	ENSPNYG00000006806	shha (ENSPNYG00000006829)	rnf32 (ENSPNYG00000006852)
Haplochromini_B	ANCESTRAL SPECIES	18	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b.i #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160993	ENSGT01030000234667.a.a.a.b.a	ENSGT00940000156177	ENSGT00940000156398	ENSGT01100000263537.b.a.a.b.b	ENSGT00940000156098.a	ENSGT00510000049635	ENSGT00940000155230	ENSGT00940000156220.k	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935.g.b	ENSGT00530000063891.cc	ENSGT00940000159119.b.f.a	ENSGT00390000003759
Zebra mbuna	MODERN SPECIES	1112	hhatlb (ENSMZEG00005019764)	klhl40b (ENSMZEG00005019769)	ZBTB47 (ENSMZEG00005019770)	ENSMZEG00005019775	ENSMZEG00005019777	ENSMZEG00005019781	SEC22C (ENSMZEG00005019783)	vipr1b (ENSMZEG00005019790)	ENSMZEG00005019800	plod2 (ENSMZEG00005019823) #36	dipk2ab (ENSMZEG00005021968) #25	SLC9A9 (ENSMZEG00005021971) #24	CHST2 (ENSMZEG00005021974) #23	trpc1 (ENSMZEG00005021979) #19	pcolce2b (ENSMZEG00005021986) #20	u2surp (ENSMZEG00005021991) #22	acad11 (ENSMZEG00005022006)	ackr4b (ENSMZEG00005022042)	uba5 (ENSMZEG00005022045)	nphp3 (ENSMZEG00005022048)	ENSMZEG00005022053	ENSMZEG00005022058	ENSMZEG00005022072	tgif1 (ENSMZEG00005022078)	DLGAP1 (ENSMZEG00005022080)	htr5ab (ENSMZEG00005022087)	insig1 (ENSMZEG00005022090)	en2a (ENSMZEG00005022094)	ENSMZEG00005022100	shha (ENSMZEG00005022108)	rnf32 (ENSMZEG00005000118)
Eastern happy	MODERN SPECIES	21	NCK1 (ENSACLG00000027352)	bdh1 (ENSACLG00000027355)	gyg1b (ENSACLG00000027360)	cpb1 (ENSACLG00000027369)	AGTR1 (ENSACLG00000027373)	ENSACLG00000027374	zic1 (ENSACLG00000027380)	zic4 (ENSACLG00000027396)	ENSACLG00000027409	plod2 (ENSACLG00000027422) #36	dipk2ab (ENSACLG00000027458) #25	SLC9A9 (ENSACLG00000027463) #24	CHST2 (ENSACLG00000027469) #23	trpc1 (ENSACLG00000027474) #19	pcolce2b (ENSACLG00000027486) #20	u2surp (ENSACLG00000027507) #22	acad11 (ENSACLG00000027542)	ackr4b (ENSACLG00000027556)	uba5 (ENSACLG00000027559)	nphp3 (ENSACLG00000027568)	ENSACLG00000027585	ENSACLG00000027588	ENSACLG00000027605	tgif1 (ENSACLG00000027611)	DLGAP1 (ENSACLG00000027612)	ENSACLG00000027618	htr5ab (ENSACLG00000027619)	insig1 (ENSACLG00000027622)	en2a (ENSACLG00000027625)	ENSACLG00000027629	shha (ENSACLG00000027636)
Nile tilapia	MODERN SPECIES	21	ENSONIG00000027784	slc35g2b (ENSONIG00000020453)	NCK1 (ENSONIG00000005858)	bdh1 (ENSONIG00000005863)	cpb1 (ENSONIG00000005865)	AGTR1 (ENSONIG00000033827)	zic1 (ENSONIG00000041800)	zic4 (ENSONIG00000035266)	ENSONIG00000005881	plod2 (ENSONIG00000005883) #36	dipk2ab (ENSONIG00000005895) #25	SLC9A9 (ENSONIG00000005897) #24	CHST2 (ENSONIG00000020455) #23	trpc1 (ENSONIG00000005900) #19	pcolce2b (ENSONIG00000005906) #20	u2surp (ENSONIG00000005909) #22	ackr4b (ENSONIG00000020456)	acad11 (ENSONIG00000005913)	uba5 (ENSONIG00000005917)	nphp3 (ENSONIG00000005921)	ENSONIG00000005929	ENSONIG00000005930	ENSONIG00000043116	tgif1 (ENSONIG00000032216)	DLGAP1 (ENSONIG00000005935)	htr5a (ENSONIG00000037517)	insig1 (ENSONIG00000005939)	en2a (ENSONIG00000032959)	RBM33 (ENSONIG00000005941)	shh (ENSONIG00000005944)	rnf32 (ENSONIG00000005948)
Midas cichlid	MODERN SPECIES	363	slc35g2b (ENSACIG00000019015)	NCK1 (ENSACIG00000019007)	bdh1 (ENSACIG00000018994)	gyg1b (ENSACIG00000018838)	cpb1 (ENSACIG00000018754)	AGTR1 (ENSACIG00000018743)	zic1 (ENSACIG00000018732)	zic4 (ENSACIG00000018721)	ENSACIG00000018708	plod2 (ENSACIG00000018677) #36	dipk2ab (ENSACIG00000018657) #25	SLC9A9 (ENSACIG00000018630) #24	CHST2 (ENSACIG00000018621) #23	trpc1 (ENSACIG00000018603) #19	pcolce2b (ENSACIG00000018585) #20	u2surp (ENSACIG00000018537) #22	ackr4b (ENSACIG00000018526)	acad11 (ENSACIG00000018487)	uba5 (ENSACIG00000018458)	nphp3 (ENSACIG00000018414)	ENSACIG00000018403	ENSACIG00000018317	ENSACIG00000018304	tgif1 (ENSACIG00000018293)	DLGAP1 (ENSACIG00000018274)	htr5ab (ENSACIG00000018260)	insig1 (ENSACIG00000018246)	en2a (ENSACIG00000018240)	ENSACIG00000018229	shha (ENSACIG00000018215)	shha (ENSACIG00000018203)
Tiger tail seahorse	MODERN SPECIES	62	insig1 (ENSHCOG00000011940)	en2a (ENSHCOG00000011924)	ENSHCOG00000011869	shha (ENSHCOG00000011853)	rnf32 (ENSHCOG00000011846)	lmbr1 (ENSHCOG00000011834)	ENSHCOG00000011797	ENSHCOG00000011790	nom1 (ENSHCOG00000011777)	mnx1 (ENSHCOG00000011761)	ube3c (ENSHCOG00000011748)	dnajb6b (ENSHCOG00000011709)	CHST2 (ENSHCOG00000011702) #23	trpc1 (ENSHCOG00000011693) #19	pcolce2b (ENSHCOG00000011660) #20	u2surp (ENSHCOG00000011508) #22	plxdc2b (ENSHCOG00000011395)
Protacanthopterygii	ANCESTRAL SPECIES	65	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a	ENSGT00940000158036	ENSGT00650000094897	ENSGT00390000011552	ENSGT00940000156700.c	ENSGT01040000240385.A.b.b.a.a.b.b	ENSGT00390000017498.d	ENSGT00940000159988.c	ENSGT00940000154847.n.a	ENSGT00640000091535	ENSGT00500000044993	ENSGT00940000158760	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000160622.ab	ENSGT00390000005140.b.b	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00940000155667.b.a	ENSGT00400000023530.b	ENSGT00940000155252.fb.a	ENSGT00940000153601.a.b.c	ENSGT00940000160961	ENSGT00940000163532	ENSGT00530000063786.a	ENSGT00940000154535.D.vb.a	ENSGT00940000156998.j.a	ENSGT00950000182886.a.a.a.c	ENSGT00940000155624.a.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	33	ENSGT00940000158036.i.a	ENSGT00650000094897.f	ENSGT00390000011552.k	ENSGT00940000156700.c.c	ENSGT01040000240385.A.b.b.a.a.b.b	ENSGT00990000211485	ENSGT00390000017498.d	ENSGT00940000159988.c	ENSGT00940000154847.n.a.c	ENSGT00640000091535	ENSGT00500000044993.e	ENSGT00940000158760.c	ENSGT00940000161292.g #23	ENSGT01060000248594.f #19	ENSGT00940000157649.e #20	ENSGT00390000010687.a.a.a #22	ENSGT00940000160622.ab.d	ENSGT00390000005140.b.b.m.b	ENSGT01030000234629.D.d	ENSGT00940000157975.y.a	ENSGT00940000155667.b.a.c	ENSGT00400000023530.b	ENSGT00940000155252.fb.a.f.a	ENSGT00940000155252.fb.a.e	ENSGT00940000153601.a.b.c.c	ENSGT00940000160961.j	ENSGT00940000163532	ENSGT00530000063786.a	ENSGT00940000154535.D.vb.a	ENSGT00940000156998.j.a.c	ENSGT00950000182886.a.a.a.c.g
Salmoninae_a	ANCESTRAL SPECIES	32	ENSGT00940000158036.i.a	ENSGT00650000094897.f	ENSGT00390000011552.k	ENSGT00940000156700.c.c	ENSGT01040000240385.A.b.b.a.a.b.b	ENSGT00990000211485.b	ENSGT00390000017498.d	ENSGT00940000159988.c.c	ENSGT00940000154847.n.a.c	ENSGT00640000091535	ENSGT00500000044993.e	ENSGT00940000158760.c	ENSGT00940000161292.g #23	ENSGT01060000248594.f #19	ENSGT00940000157649.e #20	ENSGT00390000010687.a.a.a #22	ENSGT00940000160622.ab.d	ENSGT00390000005140.b.b.m.b	ENSGT01030000234629.D.d	ENSGT00940000157975.y.a	ENSGT00940000155667.b.a.c	ENSGT00400000023530.b	ENSGT00940000155252.fb.a.f.a	ENSGT00940000153601.a.b.c.c	ENSGT00940000160961.j	ENSGT00940000163532	ENSGT00530000063786.a	ENSGT00940000154535.D.vb.a.o	ENSGT00940000156998.j.a.c	ENSGT00950000182886.a.a.a.c.g	ENSGT00940000155624.a.a
Salmo	ANCESTRAL SPECIES	3	ENSGT00650000094897.f	ENSGT00940000163587.a.b.b.f.b	ENSGT00390000011552.k	ENSGT00940000156700.c.c	ENSGT01040000240385.A.b.b.a.a.b.b	ENSGT00990000211485.b	ENSGT00390000017498.d	ENSGT00940000159988.c.c	ENSGT00940000154847.n.a.c	ENSGT00640000091535	ENSGT00500000044993.e	ENSGT00940000158760.c	ENSGT00940000161292.g #23	ENSGT01060000248594.f #19	ENSGT00940000157649.e #20	ENSGT00390000010687.a.a.a #22	ENSGT00940000160622.ab.d	ENSGT00390000005140.b.b.n	ENSGT01030000234629.D.d	ENSGT00940000157975.y.a	ENSGT00940000155667.b.a.c	ENSGT00400000023530.b	ENSGT00940000155252.fb.a.f.a	ENSGT00940000153601.a.b.c.c	ENSGT00940000160961.i.a	ENSGT00940000163532	ENSGT00530000063786.a	ENSGT00940000154535.D.vb.a.o	ENSGT00940000156998.j.a.c	ENSGT00950000182886.a.a.a.c.g	ENSGT00940000155624.a.a
Atlantic salmon	MODERN SPECIES	10	ENSSSAG00000084527	ENSSSAG00000084239	ENSSSAG00000079330	timm21 (ENSSSAG00000079343)	ENSSSAG00000083926	ENSSSAG00000096313	ENSSSAG00000100095	ENSSSAG00000079355	cbln2 (ENSSSAG00000079357)	SOCS6 (ENSSSAG00000079363)	RTTN (ENSSSAG00000079372)	dok6 (ENSSSAG00000079474)	chst2 (ENSSSAG00000106343) #23	trpc1 (ENSSSAG00000079482) #19	pcolce2b (ENSSSAG00000043446) #20	U2SURP (ENSSSAG00000099468) #22	ENSSSAG00000115362	ENSSSAG00000094163	ENSSSAG00000110660	ENSSSAG00000067624	fbxo45 (ENSSSAG00000103200)	LRC33 (ENSSSAG00000045541)	ENSSSAG00000045550	VAV3 (ENSSSAG00000045787)	NTNG1 (ENSSSAG00000113237)	prmt6 (ENSSSAG00000122141)	ENSSSAG00000052787	col11a1a (ENSSSAG00000055939)	olfm3 (ENSSSAG00000055961)	ENSSSAG00000116431	abca4a (ENSSSAG00000093050)
River trout	MODERN SPECIES	11	ENSSTUG00000049339	ENSSTUG00000049341	timm21 (ENSSTUG00000049344)	NETO1 (ENSSTUG00000049352)	ENSSTUG00000000052	ENSSTUG00000000085	ENSSTUG00000001162	cbln2b (ENSSTUG00000001177)	SOCS6 (ENSSTUG00000001215)	RTTN (ENSSTUG00000001248)	cd226 (ENSSTUG00000001296)	dok6 (ENSSTUG00000001301)	CHST2 (ENSSTUG00000001316) #23	trpc1 (ENSSTUG00000001332) #19	pcolce2b (ENSSTUG00000001407) #20	u2surp (ENSSTUG00000001466) #22	ENSSTUG00000001550	ENSSTUG00000001879	fam168b (ENSSTUG00000001882)	fbxo45 (ENSSTUG00000001885)	nrros (ENSSTUG00000001893)	sh3glb1a (ENSSTUG00000001902)	ENSSTUG00000001942	VAV3 (ENSSTUG00000002005)	ENSSTUG00000002392	NTNG1 (ENSSTUG00000002404)	prmt6 (ENSSTUG00000002410)	amy2a (ENSSTUG00000002464)	rnpc3 (ENSSTUG00000003257)	col11a1a (ENSSTUG00000003319)	olfm3a (ENSSTUG00000003354)
Oncorhynchus	ANCESTRAL SPECIES	28	ENSGT00940000155822.h	ENSGT00940000158036.i.b.a.a.a.a	ENSGT00650000094897.f	ENSGT00390000011552.k	ENSGT00940000156700.c.c	ENSGT01040000240385.A.b.b.a.a.b.b	ENSGT00390000017498.d	ENSGT00940000159988.c.c	ENSGT00940000154847.n.a.c	ENSGT00640000091535	ENSGT00500000044993.e	ENSGT00940000158760.c	ENSGT00940000161292.g #23	ENSGT01060000248594.f #19	ENSGT00940000157649.e #20	ENSGT00390000010687.a.a.a #22	ENSGT00940000160622.ab.d	ENSGT00390000005140.b.b.m.b	ENSGT01030000234629.D.d	ENSGT00940000157975.y.a	ENSGT00940000155667.b.a.c	ENSGT00400000023530.b	ENSGT00940000155252.fb.a.f.a	ENSGT00940000153601.a.b.c.c	ENSGT00940000160961.j	ENSGT00940000163532	ENSGT00530000063786.a	ENSGT00940000154535.D.vb.a.o	ENSGT00940000156998.j.a.c	ENSGT00950000182886.a.a.a.c.g	ENSGT00940000155624.a.a
Rainbow trout	MODERN SPECIES	2	ENSOMYG00000077419	ENSOMYG00000043882	SOCS6b2 (ENSOMYG00000010581)	RTTN (ENSOMYG00000010729)	ENSOMYG00000071290	cd226 (ENSOMYG00000011474)	dok6 (ENSOMYG00000011486)	ENSOMYG00000067073	ENSOMYG00000048974	ENSOMYG00000075743	ENSOMYG00000053933	ENSOMYG00000060580	ENSOMYG00000003615	trpc1 (ENSOMYG00000011536) #19	ENSOMYG00000011775 #20	U2SURP (ENSOMYG00000012004) #22	ENSOMYG00000013234	ENSOMYG00000013251	fbxo45 (ENSOMYG00000013259)	nrros (ENSOMYG00000013279)	sh3glb1a (ENSOMYG00000013333)	ENSOMYG00000013436	VAV3 (ENSOMYG00000013457)	NTNG1 (ENSOMYG00000013465)	prmt6 (ENSOMYG00000013468)	ENSOMYG00000056104	ENSOMYG00000013615	rnpc3 (ENSOMYG00000015006)	ENSOMYG00000060369	ENSOMYG00000015117	olfm3a (ENSOMYG00000015130)
Oncorhynchus_a	ANCESTRAL SPECIES	23	ENSGT00940000155822.h	ENSGT00940000158036.i.b.a.a.a.a	ENSGT00650000094897.f	ENSGT00390000011552.k	ENSGT00940000156700.c.c	ENSGT01040000240385.A.b.b.a.a.b.b	ENSGT00390000017498.d	ENSGT00940000159988.c.c	ENSGT00940000154847.n.a.c	ENSGT00640000091535	ENSGT00500000044993.e	ENSGT00940000158760.c	ENSGT00940000161292.g #23	ENSGT01060000248594.f #19	ENSGT00940000157649.e #20	ENSGT00390000010687.a.a.a #22	ENSGT00940000160622.ab.d	ENSGT00390000005140.b.b.m.b	ENSGT01030000234629.D.d	ENSGT00940000157975.y.a	ENSGT00940000155667.b.a.c	ENSGT00400000023530.b	ENSGT00940000155252.fb.a.f.a	ENSGT00940000153601.a.b.c.c	ENSGT00940000160961.j	ENSGT00940000163532	ENSGT00530000063786.a	ENSGT00940000154535.D.vb.a.o	ENSGT00940000156998.j.a.c	ENSGT00950000182886.a.a.a.c.g	ENSGT00940000155624.a.a
Coho salmon	MODERN SPECIES	9	timm21 (ENSOKIG00005047137)	ENSOKIG00005047133	ENSOKIG00005047125	ENSOKIG00005047121	NETO1 (ENSOKIG00005047096)	ENSOKIG00005047089	cbln2b (ENSOKIG00005047071)	SOCS6 (ENSOKIG00005047064)	ENSOKIG00005047061	RTTN (ENSOKIG00005047040)	cd226 (ENSOKIG00005047014)	dok6 (ENSOKIG00005047003)	CHST2 (ENSOKIG00005046997) #23	trpc1 (ENSOKIG00005046951) #19	pcolce2b (ENSOKIG00005046897) #20	u2surp (ENSOKIG00005046800) #22	ENSOKIG00005046763	ENSOKIG00005046745	fam168b (ENSOKIG00005046740)	fbxo45 (ENSOKIG00005046736)	nrros (ENSOKIG00005046733)	sh3glb1a (ENSOKIG00005046637)	ENSOKIG00005046608	ENSOKIG00005046604	VAV3 (ENSOKIG00005046520)	NTNG1 (ENSOKIG00005046492)	prmt6 (ENSOKIG00005046484)	amy2a (ENSOKIG00005045759)	rnpc3 (ENSOKIG00005045693)	ENSOKIG00005045652	olfm3a (ENSOKIG00005045636)
Chinook salmon	MODERN SPECIES	7	ENSOTSG00005023933	sema5a (ENSOTSG00005023934)	ENSOTSG00005023936	timm21 (ENSOTSG00005023939)	NETO1 (ENSOTSG00005023942)	ENSOTSG00005023946	ENSOTSG00005023947	cbln2b (ENSOTSG00005023949)	SOCS6 (ENSOTSG00005023968)	RTTN (ENSOTSG00005023969)	cd226 (ENSOTSG00005023986)	dok6 (ENSOTSG00005023987)	CHST2 (ENSOTSG00005023988) #23	trpc1 (ENSOTSG00005023991) #19	pcolce2b (ENSOTSG00005024068) #20	u2surp (ENSOTSG00005024071) #22	ENSOTSG00005024199	fam168b (ENSOTSG00005024201)	fbxo45 (ENSOTSG00005024203)	nrros (ENSOTSG00005024204)	sh3glb1a (ENSOTSG00005024213)	ENSOTSG00005024358	VAV3 (ENSOTSG00005024359)	NTNG1 (ENSOTSG00005024366)	prmt6 (ENSOTSG00005024367)	amy2a (ENSOTSG00005024379)	rnpc3 (ENSOTSG00005025861)	col11a1a (ENSOTSG00005025866)	olfm3a (ENSOTSG00005025875)	ENSOTSG00005025877	abca4a (ENSOTSG00005025904)
Huchen	MODERN SPECIES	2698													CHST2 (ENSHHUG00000045111) #23	trpc1 (ENSHHUG00000045115) #19	pcolce2b (ENSHHUG00000045177) #20	u2surp (ENSHHUG00000045212) #22
Salmoninae	ANCESTRAL SPECIES	777															ENSGT00940000157649.f #20	ENSGT00390000010687.a.a.b #22	ENSGT00940000160622.ab.c	ENSGT00390000005140.b.b.m.a	ENSGT01030000234629.D.c	ENSGT00940000157975.y.b	ENSGT00940000155667.b.a.d	ENSGT00940000155252.fb.a.f.b	ENSGT00940000153601.a.b.c.d	ENSGT00940000160961.i.b
Huchen	DUPLICATION
Huchen	MODERN SPECIES	6926																u2surp (ENSHHUG00000011677) #22
Huchen	MODERN SPECIES	6814														pcolce2b (ENSHHUG00000004524) #20	ENSHHUG00000004516	ENSHHUG00000004499 #22
Salmoninae_a	ANCESTRAL SPECIES	35	ENSGT00940000166463	ENSGT00390000001844.a.a.e	ENSGT00940000156371.c.a.a.b.b	ENSGT00550000074988.h	ENSGT00940000155822.g	ENSGT00940000158036.i.b.b	ENSGT00650000094897.e	ENSGT00390000011552.l	ENSGT00940000156700.c.d	ENSGT00940000159988.c.d	ENSGT00940000154847.n.a.d	ENSGT00500000044993.f	ENSGT00940000158760.d	ENSGT00940000161292.h #23	ENSGT00940000157649.f #20	ENSGT00390000010687.a.a.b #22	ENSGT00940000160622.ab.c	ENSGT00390000005140.b.b.m.a	ENSGT01030000234629.D.c	ENSGT00940000157975.y.b	ENSGT00940000155667.b.a.d	ENSGT00940000153601.a.b.c.d	ENSGT00940000160961.i.b	ENSGT01100000264448.a	ENSGT00940000154535.D.vb.a.p	ENSGT00940000156998.j.a.d	ENSGT00950000182886.a.a.a.c.h	ENSGT00950000183110.b.b.k.a.f.a	ENSGT00950000182955.a.a.a.g.e	ENSGT00390000016735.gb.b.b	ENSGT00390000012668.g.a.f
Salmo	ANCESTRAL SPECIES	67	ENSGT00390000010734.p	ENSGT00940000166463	ENSGT00390000001844.a.a.e	ENSGT00940000156371.c.a.a.b.b	ENSGT00550000074988.h	ENSGT00940000155822.g	ENSGT00940000158036.i.b.b	ENSGT00650000094897.e	ENSGT00390000011552.l	ENSGT00940000156700.c.d	ENSGT00940000159988.c.d	ENSGT00940000154847.n.a.d	ENSGT00940000158760.d.c	ENSGT00940000161292.h #23	ENSGT00940000157649.f #20	ENSGT00390000010687.a.a.b #22	ENSGT00940000160622.ab.c	ENSGT00390000005140.b.b.m.a	ENSGT01030000234629.D.c	ENSGT00940000157975.y.b	ENSGT00940000155667.b.a.d	ENSGT01100000263837.A	ENSGT00940000155252.fb.a.f.b	ENSGT00940000153601.a.b.c.d	ENSGT00940000160961.i.b	ENSGT01100000264772.a	ENSGT01100000264448.a	ENSGT00940000154535.D.vb.a.p	ENSGT00940000156998.j.a.d	ENSGT00950000182886.a.a.a.c.h	ENSGT00950000183110.b.b.k.a.f.a
River trout	MODERN SPECIES	36	ENSSTUG00000020983	ENSSTUG00000020968	cct5 (ENSSTUG00000020857)	ENSSTUG00000020571	sema5a (ENSSTUG00000020375)	ENSSTUG00000020349	timm21 (ENSSTUG00000020326)	NETO1 (ENSSTUG00000020305)	ENSSTUG00000020298	cbln2b (ENSSTUG00000020274)	SOCS6 (ENSSTUG00000020270)	ENSSTUG00000020261	dok6 (ENSSTUG00000020244)	CHST2 (ENSSTUG00000020238) #23	pcolce2b (ENSSTUG00000019985) #20	u2surp (ENSSTUG00000019917) #22	ENSSTUG00000019834	fam168b (ENSSTUG00000019826)	fbxo45 (ENSSTUG00000019816)	nrros (ENSSTUG00000019812)	ENSSTUG00000019807	ENSSTUG00000019803	VAV3 (ENSSTUG00000019568)	ENSSTUG00000019543	ENSSTUG00000019541	ENSSTUG00000019538	NTNG1 (ENSSTUG00000019528)	prmt6 (ENSSTUG00000019505)	ENSSTUG00000019471	ENSSTUG00000019460	ENSSTUG00000019443
Atlantic salmon	MODERN SPECIES	21	ENSSSAG00000103614	ENSSSAG00000065008	ENSSSAG00000065102	cct5 (ENSSSAG00000065040)	sema5a (ENSSSAG00000079002)	ENSSSAG00000067027	timm21 (ENSSSAG00000067028)	ENSSSAG00000117074	ENSSSAG00000087694	ENSSSAG00000013440	cbln2b (ENSSSAG00000067048)	ENSSSAG00000067058	SOCS6 (ENSSSAG00000115251)	ENSSSAG00000120699 #23	ENSSSAG00000067081 #20	ENSSSAG00000113722 #22	arhg4 (ENSSSAG00000067603)	ENSSSAG00000091470	ENSSSAG00000116299	ENSSSAG00000067646	ENSSSAG00000112101	VAV3 (ENSSSAG00000067657)	NTNG1 (ENSSSAG00000093541)	ENSSSAG00000067688	ENSSSAG00000067700	col11a1a (ENSSSAG00000091663)	olfm3a (ENSSSAG00000067706)	ENSSSAG00000009320	ARHGAP29 (ENSSSAG00000067720)	ABCD3 (ENSSSAG00000103268)	F3 (ENSSSAG00000067842)
Oncorhynchus	ANCESTRAL SPECIES	27	ENSGT00390000001844.a.a.e	ENSGT00940000156371.c.a.a.b.b.f	ENSGT00940000156371.c.a.a.b.b.e	ENSGT00550000074988.h	ENSGT00940000155822.g	ENSGT00940000158036.i.b.b	ENSGT00650000094897.e	ENSGT00940000156700.c.d	ENSGT00940000159988.c.d	ENSGT00940000154847.n.a.d	ENSGT00500000044993.f	ENSGT00940000158760.d	ENSGT00940000161292.h #23	ENSGT00940000179453	ENSGT00940000157649.f #20	ENSGT00390000010687.a.a.b #22	ENSGT00940000160622.ab.c	ENSGT00390000005140.b.b.m.a	ENSGT01030000234629.D.c	ENSGT00940000157975.y.b	ENSGT00940000153601.a.b.c.d	ENSGT01100000264448.a	ENSGT00940000154535.D.vb.a.p	ENSGT00940000156998.j.a.d	ENSGT00950000182886.a.a.a.c.h	ENSGT00950000182955.a.a.a.g.e	ENSGT00390000016735.gb.b.b	ENSGT00390000012668.g.a.f	ENSGT00940000154539.a.a.c.a	ENSGT00390000002579.c	ENSGT01010000222313.A.b.a.d.h.d
Rainbow trout	MODERN SPECIES	6	cct5 (ENSOMYG00000018431)	ENSOMYG00000018146	sema5a (ENSOMYG00000018117)	ENSOMYG00000048739	ENSOMYG00000062888	ENSOMYG00000018099	ENSOMYG00000073101	ENSOMYG00000018082	cbln2b (ENSOMYG00000018076)	SOCS6b1 (ENSOMYG00000018020)	ENSOMYG00000026569	dok6 (ENSOMYG00000018000)	ENSOMYG00000017995 #23	ENSOMYG00000017986	ENSOMYG00000017948 #20	ENSOMYG00000017935 #22	ENSOMYG00000017927	ENSOMYG00000055571	ENSOMYG00000050064	ENSOMYG00000053790	ENSOMYG00000017849	ENSOMYG00000076655	ENSOMYG00000050281	ENSOMYG00000017838	ENSOMYG00000010932	ENSOMYG00000076399	ENSOMYG00000017809	ENSOMYG00000017747	ENSOMYG00000059391	ENSOMYG00000059588	ENSOMYG00000077746
Oncorhynchus_a	ANCESTRAL SPECIES	89	ENSGT00390000001844.a.a.e	ENSGT00940000156371.c.a.a.b.b.f	ENSGT00940000156371.c.a.a.b.b.e	ENSGT00550000074988.h	ENSGT00940000155822.g	ENSGT00940000158036.i.b.b	ENSGT00650000094897.e	ENSGT00940000156700.c.d	ENSGT00940000159988.c.d	ENSGT00940000154847.n.a.d	ENSGT00500000044993.f	ENSGT00940000158760.d	ENSGT00940000161292.h #23	ENSGT00940000179453	ENSGT00940000157649.f #20	ENSGT00390000010687.a.a.b #22	ENSGT00940000160622.ab.c	ENSGT00390000005140.b.b.m.a	ENSGT01030000234629.D.c	ENSGT00940000157975.y.b	ENSGT00940000153601.a.b.c.d	ENSGT01100000264448.a	ENSGT00940000154535.D.vb.a.p	ENSGT00940000156998.j.a.d	ENSGT00950000182886.a.a.a.c.h	ENSGT00950000182955.a.a.a.g.e	ENSGT00390000016735.gb.b.b	ENSGT00390000012668.g.a.f	ENSGT00940000154539.a.a.c.a	ENSGT00390000002579.c	ENSGT01010000222313.A.b.a.d.h.d
Coho salmon	MODERN SPECIES	2	ENSOKIG00005001951	cct5 (ENSOKIG00005002025)	MTRR (ENSOKIG00005002199)	sema5a (ENSOKIG00005002375)	ENSOKIG00005002406	NETO1 (ENSOKIG00005002421)	cbln2b (ENSOKIG00005002429)	ENSOKIG00005002445	ENSOKIG00005002453	SOCS6 (ENSOKIG00005002466)	cd226 (ENSOKIG00005002472)	dok6 (ENSOKIG00005002484)	ENSOKIG00005002501	CHST2 (ENSOKIG00005002510) #23	PCOLCE2 (ENSOKIG00005002533) #20	U2SURP (ENSOKIG00005002680) #22	ENSOKIG00005002778	FAM168B (ENSOKIG00005002836)	fbxo45 (ENSOKIG00005002866)	nrros (ENSOKIG00005002882)	VAV3 (ENSOKIG00005002923)	ENSOKIG00005002950	NTNG1 (ENSOKIG00005002957)	ENSOKIG00005002971	ENSOKIG00005002977	col11a1a (ENSOKIG00005003044)	ENSOKIG00005003204	OLFM3 (ENSOKIG00005003217)	ENSOKIG00005003243	abcd3a (ENSOKIG00005003552)	acp5b (ENSOKIG00005005732)
Chinook salmon	MODERN SPECIES	21	hgd (ENSOTSG00005004583)	ndufb4 (ENSOTSG00005004572)	pomp (ENSOTSG00005004557)	ENSOTSG00005004555	cct5 (ENSOTSG00005004544)	ENSOTSG00005004541	MTRR (ENSOTSG00005004159)	sema5a (ENSOTSG00005004152)	ENSOTSG00005004149	cbln2b (ENSOTSG00005004143)	SOCS6 (ENSOTSG00005004141)	dok6 (ENSOTSG00005004138)	CHST2 (ENSOTSG00005004137) #23	ENSOTSG00005004136	pcolce2b (ENSOTSG00005003864) #20	u2surp (ENSOTSG00005003858) #22	ENSOTSG00005003856	fam168b (ENSOTSG00005003853)	fbxo45 (ENSOTSG00005003852)	nrros (ENSOTSG00005003850)	ENSOTSG00005003849	ENSOTSG00005003848	NTNG1 (ENSOTSG00005003847)	ENSOTSG00005003815	ENSOTSG00005003684	abcd3a (ENSOTSG00005003509)	acp5b (ENSOTSG00005003496)	f3a (ENSOTSG00005003494)	CNN3 (ENSOTSG00005003492)	alg14 (ENSOTSG00005003490)	TLCD4 (ENSOTSG00005003488)
Northern pike	MODERN SPECIES	20	MTRR (ENSELUG00000002064)	sema5a (ENSELUG00000002068)	ENSELUG00000002070	timm21 (ENSELUG00000002074)	NETO1 (ENSELUG00000002080)	ENSELUG00000002077	ENSELUG00000002086	cbln2b (ENSELUG00000002092)	SOCS6 (ENSELUG00000002095)	RTTN (ENSELUG00000002104)	cd226 (ENSELUG00000001049)	dok6 (ENSELUG00000002117)	CHST2 (ENSELUG00000002122) #23	trpc1 (ENSELUG00000002134) #19	pcolce2b (ENSELUG00000002141) #20	u2surp (ENSELUG00000002150) #22	ENSELUG00000002168	fam168b (ENSELUG00000002179)	nrros (ENSELUG00000002183)	sh3glb1a (ENSELUG00000002192)	ENSELUG00000002200	VAV3 (ENSELUG00000002208)	NTNG1 (ENSELUG00000002232)	prmt6 (ENSELUG00000002245)	ENSELUG00000002253	ENSELUG00000002247	rnpc3 (ENSELUG00000002264)	ENSELUG00000002283	olfm3a (ENSELUG00000002299)	ENSELUG00000002311	abca4a (ENSELUG00000002360)
Otomorpha	ANCESTRAL SPECIES	74	ENSGT00950000182972.a.a.a.b.l	ENSGT00940000153249.b.d.b	ENSGT00940000156601.s	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b.e	ENSGT00940000160269.f	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a #22	ENSGT00940000155714 #16	ENSGT00530000063529.C	ENSGT00940000160622.ab	ENSGT00390000005140.b.b	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00940000155667.b.a	ENSGT00400000023530.b	ENSGT00940000155252.fb.a	ENSGT00940000153601.a.b.c	ENSGT00940000160961	ENSGT00940000163518	ENSGT00530000063786.a	ENSGT00940000154535.D.vb.a	ENSGT00940000156998.j.a
Otophysi	ANCESTRAL SPECIES	5	ENSGT01060000248660	ENSGT00940000159311.d.a.b	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000164907.a	ENSGT00530000063408.B.c.a	ENSGT00940000154284.a	ENSGT00950000183056.B.b	ENSGT00940000153141.B.a	ENSGT00940000159497	ENSGT00940000158863	ENSGT00940000153886.a.b	ENSGT00940000153649.A	ENSGT00940000166547	ENSGT00940000159203	ENSGT00390000010687.a.a #22	ENSGT00390000008279.a	ENSGT00390000002727	ENSGT00390000010157.a	ENSGT00520000060044	ENSGT00390000014590	ENSGT00940000159218.a	ENSGT00940000164586.h	ENSGT00940000160852	ENSGT00390000012433.b.c.b	ENSGT00980000198608	ENSGT00940000159923	ENSGT00940000158429	ENSGT00950000183128.B	ENSGT00390000018077	ENSGT00940000160040.B.a.a
Characiphysae	ANCESTRAL SPECIES	77	ENSGT00940000158258.f	ENSGT00940000159311.d.a.b	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000164907.a	ENSGT00530000063408.B.c.a	ENSGT00940000154284.a	ENSGT00950000183056.B.b	ENSGT00940000153141.B.a	ENSGT00940000159497	ENSGT00940000158863	ENSGT00940000153886.a.b	ENSGT00940000153649.A	ENSGT00940000166547	ENSGT00940000159203	ENSGT00390000010687.a.a #22	ENSGT00390000008279.a	ENSGT00390000002727	ENSGT00390000010157.a	ENSGT00520000060044	ENSGT00390000014590
Characiphysae_b	ANCESTRAL SPECIES	63	ENSGT00940000158258.f	ENSGT00940000159311.d.a.b	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000164907.a	ENSGT00530000063408.B.c.a	ENSGT00940000154284.a	ENSGT00950000183056.B.b	ENSGT00940000153141.B.a	ENSGT00940000159497	ENSGT00940000158863	ENSGT00940000153886.a.b	ENSGT00940000153649.A	ENSGT00940000166547	ENSGT00940000159203	ENSGT00390000010687.a.a #22	ENSGT00390000008279.a	ENSGT00390000002727	ENSGT00390000010157.a	ENSGT00520000060044	ENSGT00390000014590	ENSGT00940000159218.a	ENSGT00940000164586.h	ENSGT00940000160852	ENSGT00980000198608	ENSGT00390000012433.b.c.b	ENSGT00940000159923	ENSGT00940000158429	ENSGT00950000183128.B	ENSGT00390000018077	ENSGT00940000160040.B.a.a
Characoidei	ANCESTRAL SPECIES	74	ENSGT00940000158258.f	ENSGT00940000159311.d.a.b	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000164907.a	ENSGT00530000063408.B.c.a	ENSGT00940000154284.a	ENSGT00950000183056.B.b	ENSGT00940000153141.B.a	ENSGT00940000159497	ENSGT00940000158863	ENSGT00940000153886.a.b	ENSGT00940000153649.A	ENSGT00940000166547	ENSGT00940000159203	ENSGT00390000010687.a.a #22	ENSGT00390000008279.a	ENSGT00390000002727	ENSGT00390000010157.a	ENSGT00520000060044	ENSGT00390000014590	ENSGT00940000159218.a	ENSGT00940000164586.h	ENSGT00940000160852	ENSGT00980000198608	ENSGT00390000012433.b.c.b	ENSGT00940000159923	ENSGT00940000158429	ENSGT00950000183128.B	ENSGT00390000018077	ENSGT00940000160040.B.a.a
Red-bellied piranha	MODERN SPECIES	119	HFM1 (ENSPNAG00000010865)	znf644a (ENSPNAG00000010912)	LRRC8D (ENSPNAG00000010924)	gtf2b (ENSPNAG00000001474)	PKN2 (ENSPNAG00000011044)	zgc:56628 (ENSPNAG00000011091)	hs2st1a (ENSPNAG00000011111)	selenof (ENSPNAG00000011122)	fam110b (ENSPNAG00000001549)	tox (ENSPNAG00000001566)	ca8 (ENSPNAG00000011177)	rab2a (ENSPNAG00000011193)	CHD7 (ENSPNAG00000011245)	asph (ENSPNAG00000001642)	ttpa (ENSPNAG00000001654)	u2surp (ENSPNAG00000001722) #22	tmem59 (ENSPNAG00000011421)	lrrc42 (ENSPNAG00000011453)	yipf1 (ENSPNAG00000001746)	zgc:113691 (ENSPNAG00000011465)	ndc1 (ENSPNAG00000011490)	ENSPNAG00000001767	ENSPNAG00000011527	BEST4 (ENSPNAG00000011559)	ENSPNAG00000005840	rps8a (ENSPNAG00000001823)	hectd3 (ENSPNAG00000011696)	acadm (ENSPNAG00000001895)	rabggtb (ENSPNAG00000001908)	ASB17 (ENSPNAG00000001913)	efna2a (ENSPNAG00000011774)
Mexicana tetra	MODERN SPECIES	134						hs2st1a (ENSAMXG00000041451)	selenof (ENSAMXG00000006147)	fam110b (ENSAMXG00000025926)	cyp7a1 (ENSAMXG00000006152)	tox (ENSAMXG00000029536)	ca8 (ENSAMXG00000006163)	rab2a (ENSAMXG00000036772)	ENSAMXG00000039157	CHD7 (ENSAMXG00000006180)	ttpa (ENSAMXG00000006185)	u2surp (ENSAMXG00000006189) #22	tmem59 (ENSAMXG00000029497)	lrrc42 (ENSAMXG00000006193)
Electric eel	MODERN SPECIES	124													CHD7 (ENSEEEG00000008549)	ENSEEEG00000008541	ttpa (ENSEEEG00000008537)	u2surp (ENSEEEG00000008214) #22	tmem59 (ENSEEEG00000008212)	lrrc42 (ENSEEEG00000008211)	yipf1 (ENSEEEG00000008210)	zgc:113691 (ENSEEEG00000008209)	ndc1 (ENSEEEG00000007930)	ENSEEEG00000007906	BEST4 (ENSEEEG00000007905)	ENSEEEG00000007898	rps8a (ENSEEEG00000007884)	hectd3 (ENSEEEG00000007753)	acadm (ENSEEEG00000007745)	rabggtb (ENSEEEG00000007672)	ENSEEEG00000007667	efna2a (ENSEEEG00000007666)	ptbp1a (ENSEEEG00000007160)
Channel catfish	MODERN SPECIES	8	SLC2A2 (ENSIPUG00000007086)	ENSIPUG00000007172	efna2a (ENSIPUG00000007182)	rabggtb (ENSIPUG00000007190)	ACADM (ENSIPUG00000007227)	hectd3 (ENSIPUG00000007255)	casp20 (ENSIPUG00000007315)	ENSIPUG00000007325	rps8a (ENSIPUG00000007345)	ENSIPUG00000007477	ENSIPUG00000007526	rab2a (ENSIPUG00000007539)	CHD7 (ENSIPUG00000007585)	ENSIPUG00000007698	ttpa (ENSIPUG00000007781)	u2surp (ENSIPUG00000007822) #22	tmem59 (ENSIPUG00000007919)	ENSIPUG00000007934	ENSIPUG00000007945	ENSIPUG00000007958	pld1a (ENSIPUG00000007981)	ghsra (ENSIPUG00000008055)	nceh1a (ENSIPUG00000008081)	pccb (ENSIPUG00000008096)	PPP2R3A (ENSIPUG00000008145)	slc35g2 (ENSIPUG00000008206)	gyg1a (ENSIPUG00000008224)	RAB3A (ENSIPUG00000008248)	ENSIPUG00000008264	ENSIPUG00000008279	bloc1s3 (ENSIPUG00000008288)
Cyprinoidei	ANCESTRAL SPECIES	63														ENSGT00940000156304.c.b	ENSGT00940000159203	ENSGT00390000010687.a.a #22	ENSGT00390000008279.a	ENSGT00390000002727	ENSGT00390000010157.a	ENSGT00520000060044	ENSGT00390000014590	ENSGT00940000159218.a	ENSGT00940000164586.h	ENSGT00940000160852.g	ENSGT00980000198608	ENSGT00940000160852.h	ENSGT00390000012433.b.c.b	ENSGT00940000159923	ENSGT00940000158429	ENSGT00950000183128.B	ENSGT00940000160040.B.a.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	8	ENSGT00940000158362.d	ENSGT01050000244838.B.a.l.a	ENSGT00510000049326.b.a.a	ENSGT00940000153167.B.a	ENSGT00940000158765.l	ENSGT00930000151022.b.b	ENSGT00390000006522.a.b.b	ENSGT00940000157031.l.b	ENSGT00530000064112.a.b	ENSGT00940000154634.d.b.m	ENSGT00940000157031.l.a	ENSGT00530000064112.a.a	ENSGT00940000154634.d.b.n	ENSGT00940000166547	ENSGT00940000159203.f	ENSGT00390000010687.a.a.c #22	ENSGT00390000008279.a.p	ENSGT00390000002727	ENSGT00390000010157.a	ENSGT00520000060044	ENSGT00390000014590.f	ENSGT00940000159218.a.a	ENSGT00940000164586.h.bb.a	ENSGT00940000160852.g	ENSGT00390000012433.b.c.b.b	ENSGT00980000198608.e	ENSGT00390000012433.b.c.b.a.a	ENSGT00940000159923.f	ENSGT00940000158429.s	ENSGT00950000183128.B.a.b	ENSGT00940000160040.B.a.a.a
Cyprininae_a	ANCESTRAL SPECIES	4	ENSGT00940000158011.i	ENSGT00390000018302.a.a	ENSGT00940000158362.c	ENSGT01050000244838.B.a.l.b	ENSGT00510000049326.b.a.b	ENSGT00940000167820	ENSGT00940000153167.B.b	ENSGT00940000158765.k	ENSGT00930000151022.b.a	ENSGT00390000006522.a.b.a	ENSGT00940000157031.l.a	ENSGT00530000064112.a.a	ENSGT00940000154634.d.b.n	ENSGT00940000166547	ENSGT00940000159203.f	ENSGT00390000010687.a.a.c #22	ENSGT00390000008279.a.p	ENSGT00390000002727	ENSGT00390000010157.a	ENSGT00520000060044	ENSGT00390000014590.f	ENSGT00940000159218.a.a	ENSGT00940000164586.h.bb.a	ENSGT00940000160852.g	ENSGT00390000012433.b.c.b.a.a	ENSGT00940000159923.f	ENSGT00940000158429.s	ENSGT00940000160040.B.a.a.a	ENSGT01050000244924.a.a.b.a.b.a	ENSGT00940000160580.b.c	ENSGT00940000160280.d.b
Golden-line barbel	MODERN SPECIES	4	tmem68 (ENSSGRG00000042572)	ENSSGRG00000042573	lyn (ENSSGRG00000042591)	urod (ENSSGRG00000044101)	zswim5 (ENSSGRG00000044164)	elovl8a (ENSSGRG00000044277)	tesk2 (ENSSGRG00000044278)	toe1 (ENSSGRG00000044282)	tmx3a (ENSSGRG00000044283)	ENSSGRG00000044285	cdh7a (ENSSGRG00000044286)	ENSSGRG00000044304	impa1 (ENSSGRG00000044306)	asph (ENSSGRG00000044340)	ttpa (ENSSGRG00000044342)	u2surp (ENSSGRG00000044346) #22	tmem59 (ENSSGRG00000044440)	lrrc42 (ENSSGRG00000044441)	ndc1 (ENSSGRG00000044444)	ENSSGRG00000044581	ENSSGRG00000044582	rps8a (ENSSGRG00000044583)	hectd3 (ENSSGRG00000044635)	ENSSGRG00000044724	acadm (ENSSGRG00000044730)	efna2a (ENSSGRG00000044885)	ptbp1a (ENSSGRG00000044906)	palm1b (ENSSGRG00000046619)	plppr3a (ENSSGRG00000046620)	GRIN3B (ENSSGRG00000046624)	cldn11a (ENSSGRG00000046626)
Common carp reference	MODERN SPECIES	29	lyn (ENSCCRG00000040006)	urod (ENSCCRG00000048752)	zswim5 (ENSCCRG00000015138)	selenop2 (ENSCCRG00000082621)	si:ch73-382f3.1 (ENSCCRG00000060395)	toe1 (ENSCCRG00000081519)	tesk2 (ENSCCRG00000059728)	tmx3a (ENSCCRG00000039837)	ENSCCRG00000060967	cdh7a (ENSCCRG00000001824)	ENSCCRG00000001193	ENSCCRG00000070550	impa1 (ENSCCRG00000001188)	asph (ENSCCRG00000067076)	ttpa (ENSCCRG00000075263)	u2surp (ENSCCRG00000063280) #22	tmem59 (ENSCCRG00000040323)	lrrc42 (ENSCCRG00000072959)	yipf1 (ENSCCRG00000040315)	zgc:113691 (ENSCCRG00000078370)	ndc1 (ENSCCRG00000040182)	ENSCCRG00000068872	ENSCCRG00000001522	ENSCCRG00000001565	rps8a (ENSCCRG00000076259)	hectd3 (ENSCCRG00000016833)	acadm (ENSCCRG00000057773)	rabggtb (ENSCCRG00000018033)	efna2a (ENSCCRG00000018045)	ptbp1a (ENSCCRG00000000560)	palm1b (ENSCCRG00000057164)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	19	cbln2a (ENSCARG00000049272)	ENSCARG00000049224	atpsckmt (ENSCARG00000049198)	MARCHF6 (ENSCARG00000049029)	ENSCARG00000048991	ctnnd2b (ENSCARG00000041553)	ENSCARG00000041153	ENSCARG00000041144	ENSCARG00000041126	cdc34b (ENSCARG00000041098)	KCNJ9 (ENSCARG00000041085)	ENSCARG00000041059	impa1 (ENSCARG00000041024)	ENSCARG00000040951	ttpa (ENSCARG00000040902)	u2surp (ENSCARG00000040262) #22	tmem59 (ENSCARG00000040212)	lrrc42 (ENSCARG00000040167)	yipf1 (ENSCARG00000040134)	zgc:113691 (ENSCARG00000040123)	ndc1 (ENSCARG00000039855)	ENSCARG00000039793	ENSCARG00000039774	BEST4 (ENSCARG00000039690)	ENSCARG00000039652	rps8a (ENSCARG00000039579)	hectd3 (ENSCARG00000038820)	acadm (ENSCARG00000037358)	rabggtb (ENSCARG00000037093)	efna2a (ENSCARG00000037045)	ptbp1a (ENSCARG00000035952)
Goldfish	MODERN SPECIES	2413															ttpa (ENSCARG00000060212)	u2surp (ENSCARG00000060249) #22	tmem59 (ENSCARG00000060914)	lrrc42 (ENSCARG00000060928)	yipf1 (ENSCARG00000060966)	ENSCARG00000060979
Cyprininae	ANCESTRAL SPECIES	502														ENSGT00940000156304.c.b	ENSGT00940000159203.e	ENSGT00390000010687.a.a.d #22	ENSGT00390000008279.a.o	ENSGT00390000014590.e	ENSGT00940000159218.a.b	ENSGT00940000164586.h.bb.b	ENSGT00940000160852.h	ENSGT00390000012433.b.c.b.a.b	ENSGT00980000198608.f	ENSGT00940000159923.e	ENSGT00940000158429.t	ENSGT00950000183128.B.b	ENSGT00940000160040.B.a.a.b	ENSGT01050000244924.a.a.b.a.b.b	ENSGT00940000160580.b.d	ENSGT00940000160280.d.a	ENSGT00940000161021.a.b.b
Cyprininae_a	ANCESTRAL SPECIES	193	ENSGT00390000018056.c	ENSGT00940000158011.j.a	ENSGT00390000018302.a.b	ENSGT00940000158362.d	ENSGT01050000244838.B.a.l.a	ENSGT00510000049326.b.a.a	ENSGT00940000153167.B.a	ENSGT00940000158765.l	ENSGT00930000151022.b.b	ENSGT00390000006522.a.b.b	ENSGT00940000157031.l.b	ENSGT00530000064112.a.b	ENSGT00940000154634.d.b.m	ENSGT00940000156304.c.b	ENSGT00940000159203.e	ENSGT00390000010687.a.a.d #22	ENSGT00390000008279.a.o	ENSGT00390000014590.e	ENSGT00940000159218.a.b	ENSGT00940000164586.h.bb.b	ENSGT00940000160852.h	ENSGT00390000012433.b.c.b.a.b	ENSGT00980000198608.f	ENSGT00940000159923.e	ENSGT00940000158429.t	ENSGT00950000183128.B.b	ENSGT00940000160040.B.a.a.b	ENSGT01050000244924.a.a.b.a.b.b	ENSGT00940000160580.b.d	ENSGT00940000160280.d.a	ENSGT00940000161021.a.b.b
Golden-line barbel	MODERN SPECIES	328	tmem68 (ENSSGRG00000013833)	TGS1 (ENSSGRG00000013834)	lyn (ENSSGRG00000013865)	zswim5 (ENSSGRG00000016912)	elovl8a (ENSSGRG00000017075)	selenop2 (ENSSGRG00000017078)	toe1 (ENSSGRG00000017080)	tesk2 (ENSSGRG00000017081)	tmx3a (ENSSGRG00000017125)	cdh7a (ENSSGRG00000017312)	ENSSGRG00000017329	ENSSGRG00000017330	impa1 (ENSSGRG00000017331)	ENSSGRG00000017337	ttpa (ENSSGRG00000017338)	u2surp (ENSSGRG00000017367) #22	tmem59 (ENSSGRG00000018465)	lrrc42 (ENSSGRG00000018467)	ndc1 (ENSSGRG00000018471)	ENSSGRG00000018499	ENSSGRG00000018501	ENSSGRG00000018502	hectd3 (ENSSGRG00000018511)	ENSSGRG00000019152	acadm (ENSSGRG00000019165)	efna2a (ENSSGRG00000019672)	ptbp1a (ENSSGRG00000019697)	palm1b (ENSSGRG00000021254)	plppr3a (ENSSGRG00000021256)	GRIN3B (ENSSGRG00000021259)
Common carp reference	MODERN SPECIES	21	urod (ENSCCRG00000048846)	zswim5 (ENSCCRG00000058029)	elovl8a (ENSCCRG00000050729)	selenop2 (ENSCCRG00000062820)	toe1 (ENSCCRG00000009202)	tesk2 (ENSCCRG00000006418)	tmx3a (ENSCCRG00000075582)	ENSCCRG00000054889	cdh7a (ENSCCRG00000001641)	ENSCCRG00000054044	ENSCCRG00000063813	ENSCCRG00000001593	impa1 (ENSCCRG00000062372)	ENSCCRG00000053742	ttpa (ENSCCRG00000040804)	u2surp (ENSCCRG00000061720) #22	tmem59 (ENSCCRG00000000743)	ndc1 (ENSCCRG00000000656)	ENSCCRG00000000630	ENSCCRG00000055038	ENSCCRG00000001509	rps8a (ENSCCRG00000001346)	ENSCCRG00000001497	hectd3 (ENSCCRG00000001240)	acadm (ENSCCRG00000068209)	rabggtb (ENSCCRG00000001200)	efna2a (ENSCCRG00000057809)	ptbp1a (ENSCCRG00000018069)	palm1b (ENSCCRG00000019778)	plppr3a (ENSCCRG00000019783)	ENSCCRG00000000508
Goldfish	MODERN SPECIES	11	tesk2 (ENSCARG00000063792)	toe1 (ENSCARG00000063513)	ENSCARG00000063465	elovl8a (ENSCARG00000063409)	ENSCARG00000063391	ENSCARG00000063379	zswim5 (ENSCARG00000062904)	urod (ENSCARG00000062747)	lyn (ENSCARG00000060386)	tmem68 (ENSCARG00000060332)	ENSCARG00000060319	impa1 (ENSCARG00000060209)	asph (ENSCARG00000060126)	ttpa (ENSCARG00000060094)	ttpa (ENSCARG00000060061)	u2surp (ENSCARG00000059446) #22	ndc1 (ENSCARG00000059176)	ENSCARG00000059153	ENSCARG00000059125	rps8a (ENSCARG00000059099)	hectd3 (ENSCARG00000057615)	acadm (ENSCARG00000056692)	rabggtb (ENSCARG00000056601)	efna2a (ENSCARG00000056580)	ptbp1a (ENSCARG00000054693)	palm1b (ENSCARG00000054612)	plppr3a (ENSCARG00000054589)	GRIN3B (ENSCARG00000054522)	cldn11a (ENSCARG00000054513)	slc7a14a (ENSCARG00000054474)	slc2a2 (ENSCARG00000054291)
Zebrafish	MODERN SPECIES	11	urod (ENSDARG00000006818)	zswim5 (ENSDARG00000055900)	ENSDARG00000114805	elovl8a (ENSDARG00000068551)	selenop2 (ENSDARG00000079727)	si:ch73-382f3.1 (ENSDARG00000093833)	toe1 (ENSDARG00000077544)	tesk2 (ENSDARG00000061450)	tmx3a (ENSDARG00000038894)	DSEL (ENSDARG00000061461)	cdh7a (ENSDARG00000023542)	ENSDARG00000078267	impa1 (ENSDARG00000003517)	asph (ENSDARG00000055945)	ttpa (ENSDARG00000027584)	u2surp (ENSDARG00000061490) #22	tmem59 (ENSDARG00000019033)	lrrc42 (ENSDARG00000030591)	yipf1 (ENSDARG00000014474)	zgc:113691 (ENSDARG00000038898)	ndc1 (ENSDARG00000021120)	ENSDARG00000068580	ENSDARG00000086052	BEST4 (ENSDARG00000078455)	ENSDARG00000113087	rps8a (ENSDARG00000055996)	hectd3 (ENSDARG00000038905)	acadm (ENSDARG00000038900)	rabggtb (ENSDARG00000068587)	efna2a (ENSDARG00000031372)	ptbp1a (ENSDARG00000019362)
Clupeiformes	DUPLICATION
Clupeiformes	ANCESTRAL SPECIES	51	ENSGT00940000164582.a	ENSGT00390000013463	ENSGT00940000159537	ENSGT00940000155265.a.h	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b.e	ENSGT00940000160269.f	ENSGT00940000154200.B	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b #36	ENSGT00520000055625.b #25	ENSGT00940000161292 #23	ENSGT01060000248594.f #19	ENSGT00940000157649 #20	ENSGT00390000010687.a.a.e #22	ENSGT00940000160622.ab	ENSGT00390000005140.b.b	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00940000155667.b.a	ENSGT00400000023530.b	ENSGT00940000155252.fb.a	ENSGT00940000153601.a.b.c	ENSGT00940000160961	ENSGT00940000163518	ENSGT00530000063786.a	ENSGT00940000154535.D.vb.a	ENSGT00940000156998.j.a	ENSGT00950000182886.a.a.a.c	ENSGT00940000155624.a.a
Atlantic herring	MODERN SPECIES	8	GPT (ENSCHAG00000027178)	gyg1b (ENSCHAG00000027144)	cpb1 (ENSCHAG00000027132)	cpb1 (ENSCHAG00000027127)	cpb1 (ENSCHAG00000027124)	AGTR1 (ENSCHAG00000027123)	zic1 (ENSCHAG00000027120)	zic4 (ENSCHAG00000027118)	ENSCHAG00000027114	ENSCHAG00000027111	plod2 (ENSCHAG00000025876) #36	dipk2ab (ENSCHAG00000025751) #25	CHST2 (ENSCHAG00000025745) #23	trpc1 (ENSCHAG00000025709) #19	pcolce2b (ENSCHAG00000025676) #20	u2surp (ENSCHAG00000025638) #22	ENSCHAG00000025564	fam168b (ENSCHAG00000025555)	fbxo45 (ENSCHAG00000025550)	nrros (ENSCHAG00000025548)	sh3glb1a (ENSCHAG00000025487)	ENSCHAG00000025480	VAV3 (ENSCHAG00000025339)	NTNG1 (ENSCHAG00000025304)	prmt6 (ENSCHAG00000025300)	ENSCHAG00000025015	rnpc3 (ENSCHAG00000024961)	col11a1a (ENSCHAG00000024891)	olfm3a (ENSCHAG00000024885)	ENSCHAG00000024679	abca4a (ENSCHAG00000014943)
Denticle herring	MODERN SPECIES	11	shrprbck1r (ENSDCDG00000027765)	oplah (ENSDCDG00000027712)	foxh1 (ENSDCDG00000027701)	GPT (ENSDCDG00000026198)	gyg1b (ENSDCDG00000026167)	cpb1 (ENSDCDG00000026164)	AGTR1 (ENSDCDG00000026162)	zic1 (ENSDCDG00000026159)	zic4 (ENSDCDG00000026155)	ENSDCDG00000026149	plod2 (ENSDCDG00000016314) #36	dipk2ab (ENSDCDG00000016000) #25	CHST2 (ENSDCDG00000015996) #23	trpc1 (ENSDCDG00000015968) #19	pcolce2b (ENSDCDG00000015930) #20	U2SURP (ENSDCDG00000015910) #22	ENSDCDG00000014608	fam168b (ENSDCDG00000014575)	fbxo45 (ENSDCDG00000014570)	nrros (ENSDCDG00000014566)	ENSDCDG00000014564	sh3glb1a (ENSDCDG00000014340)	ENSDCDG00000014289	VAV3 (ENSDCDG00000013988)	NTNG1 (ENSDCDG00000013847)	prmt6 (ENSDCDG00000025898)	ENSDCDG00000025189	rnpc3 (ENSDCDG00000025176)	ENSDCDG00000025173	col11a1a (ENSDCDG00000025131)	olfm3a (ENSDCDG00000025113)
Clupeiformes	ANCESTRAL SPECIES	389					ENSGT00940000158258.f	ENSGT01060000248660	ENSGT00950000183056.B.b	ENSGT00940000153141.B.a	ENSGT00940000159497	ENSGT00940000158863	ENSGT00940000153886.a.b	ENSGT00940000153649.A	ENSGT00940000166547	ENSGT00940000156304.c.b	ENSGT00940000159203	ENSGT00390000010687.a.a.f #22
Denticle herring	MODERN SPECIES	14	cyp7a1 (ENSDCDG00000001541)	tox (ENSDCDG00000001537)	ENSDCDG00000000679	sdr16c5a (ENSDCDG00000000411)	sdr16c5a (ENSDCDG00000000404)	penka (ENSDCDG00000000396)	bpnt2 (ENSDCDG00000000378)	fam110b (ENSDCDG00000000369)	cyp7a1 (ENSDCDG00000000356)	tox (ENSDCDG00000000324)	ca8 (ENSDCDG00000000282)	rab2a (ENSDCDG00000000242)	CHD7 (ENSDCDG00000026955)	ENSDCDG00000026932	ttpa (ENSDCDG00000026917)	u2surp (ENSDCDG00000026749) #22	ATR (ENSDCDG00000026671) #16	cdc20 (ENSDCDG00000026648)	CC2D1B (ENSDCDG00000026643)	ZFYVE9 (ENSDCDG00000026633)	atg9b (ENSDCDG00000026631)	ENSDCDG00000026624	pax3a (ENSDCDG00000026620)	ENSDCDG00000026617	ENSDCDG00000026608	FRMPD1 (ENSDCDG00000026596)	grhprb (ENSDCDG00000026493)	ZBTB5 (ENSDCDG00000026486)	polr1e (ENSDCDG00000026485)	FBXO10 (ENSDCDG00000026483)	ENSDCDG00000026059
Osteoglossiformes	ANCESTRAL SPECIES	157	ENSGT00910000144305	ENSGT00940000154674.q.a	ENSGT01050000244888.b.a.c.b	ENSGT00940000182355	ENSGT00940000160269.d	ENSGT00940000154200.B.p	ENSGT00940000165699.B.b	ENSGT00940000165699.A	ENSGT01030000234558.A.a.b.f #36	ENSGT00520000055625.b #25	ENSGT00940000160094 #24	ENSGT00940000161292.b #23	ENSGT00940000161292.a #23	ENSGT00950000183097.a.b #18	ENSGT01060000248594.f.a #19	ENSGT00390000010687.a.a #22
P. kingsleyae	MODERN SPECIES	205	bdh1 (ENSPKIG00000021518)	HLTF (ENSPKIG00000021535)	gyg1a (ENSPKIG00000021566)	AGTR1 (ENSPKIG00000021582)	ENSPKIG00000021588	ZIC1 (ENSPKIG00000021609)	zic4 (ENSPKIG00000021631)	si:ch211-71m22.1 (ENSPKIG00000021642)	plod2 (ENSPKIG00000021658) #36	dipk2aa (ENSPKIG00000021688) #25	ENSPKIG00000021703	CHST2 (ENSPKIG00000021712) #23	pls1 (ENSPKIG00000021730) #18	ENSPKIG00000021769 #19	PCOLCE2 (ENSPKIG00000021811) #20	u2surp (ENSPKIG00000021859) #22	ATR (ENSPKIG00000021904) #16
Asian bonytongue	MODERN SPECIES	18	bdh1 (ENSSFOG00015031023)	HLTF (ENSSFOG00015009816)	gyg1a (ENSSFOG00015009894)	AGTR1 (ENSSFOG00015009966)	ENSSFOG00015031549	ZIC1 (ENSSFOG00015009971)	zic4 (ENSSFOG00015009983)	ENSSFOG00015024668	si:ch211-71m22.1 (ENSSFOG00015010038)	plod2 (ENSSFOG00015010084) #36	ENSSFOG00015010299	dipk2aa (ENSSFOG00015010308) #25	CHST2 (ENSSFOG00015010324) #23	pls1 (ENSSFOG00015010344) #18	PCOLCE2 (ENSSFOG00015010419) #20	u2surp (ENSSFOG00015010470) #22	gpr160 (ENSSFOG00015010516)	nadkb (ENSSFOG00015030602)	ENSSFOG00015029937	sec62 (ENSSFOG00015010606)	samd7 (ENSSFOG00015010619)	apoda.1 (ENSSFOG00015010637)	ENSSFOG00015024808	otos (ENSSFOG00015010657)	cops9 (ENSSFOG00015027033)	and2 (ENSSFOG00015010681)	adipoqb (ENSSFOG00015010696)	tmtopsb (ENSSFOG00015010704)	ENSSFOG00015010731	tfr1a (ENSSFOG00015010794)	ENSSFOG00015010836
Spotted gar	MODERN SPECIES	652	ZBTB38 (ENSLOCG00000017408) #8	RASA2 (ENSLOCG00000008121) #9	ENSLOCG00000008107	ENSLOCG00000008084	ENSLOCG00000008075 #10	rnf7 (ENSLOCG00000008065) #11	grk7b (ENSLOCG00000008038)	atp1b3b (ENSLOCG00000008025) #12	tfdp2 (ENSLOCG00000008008) #13	gk5 (ENSLOCG00000007996) #14	xrn1 (ENSLOCG00000007944) #15	ATR (ENSLOCG00000007924) #16	pls1 (ENSLOCG00000007909) #18	trpc1 (ENSLOCG00000007889) #19	pcolce2b (ENSLOCG00000007866) #20	u2surp (ENSLOCG00000007828) #22	chst2a (ENSLOCG00000017407) #23	ENSLOCG00000007817	SLC9A9 (ENSLOCG00000007796) #24	dipk2aa (ENSLOCG00000007771) #25	plod2 (ENSLOCG00000007750) #36	ENSLOCG00000007741	si:ch211-71m22.1 (ENSLOCG00000007730)	zic4 (ENSLOCG00000007717)	zic1 (ENSLOCG00000007706)	AGTR1 (ENSLOCG00000017406)	cpb1 (ENSLOCG00000007688)	gyg1b (ENSLOCG00000007672)	HLTF (ENSLOCG00000007640)	bdh1 (ENSLOCG00000007627)	NCK1 (ENSLOCG00000007610)
Reedfish	MODERN SPECIES	10	SLC16A14 (ENSECRG00000014080)	ENSECRG00000014107	ENSECRG00000014120	ZBTB38 (ENSECRG00000014143) #8	RASA2 (ENSECRG00000014177) #9	ENSECRG00000014238	ENSECRG00000014260	rnf7 (ENSECRG00000014296) #11	grk7b (ENSECRG00000014322)	atp1b3b (ENSECRG00000014354) #12	TFDP2 (ENSECRG00000014401) #13	ENSECRG00000014447	pls1 (ENSECRG00000014473) #18	trpc1 (ENSECRG00000014535) #19	pcolce2b (ENSECRG00000014562) #20	u2surp (ENSECRG00000014625) #22	chst2a (ENSECRG00000014684) #23	CHST2 (ENSECRG00000014726) #23	dipk2aa (ENSECRG00000014866) #25	ENSECRG00000014894	plod2 (ENSECRG00000014947) #36	PLSCR1 (ENSECRG00000015050)	ENSECRG00000015112	zic4 (ENSECRG00000015234)	zic1 (ENSECRG00000015318)	AGTR1 (ENSECRG00000015345)	cpb1 (ENSECRG00000015379)	HLTF (ENSECRG00000015441)	gyg1b (ENSECRG00000015561)	bdh1 (ENSECRG00000015587)	NCK1 (ENSECRG00000015624)
Elephant shark	MODERN SPECIES	1486	fbxo36a (ENSCMIG00000008069)	trip12 (ENSCMIG00000007467)	DNER (ENSCMIG00000007234)	pid1 (ENSCMIG00000007230)	rnf7 (ENSCMIG00000007226) #11	grk7b (ENSCMIG00000007186)	atp1b3b (ENSCMIG00000007163) #12	TFDP2 (ENSCMIG00000007155) #13	gk5 (ENSCMIG00000007147) #14	xrn1 (ENSCMIG00000007051) #15	ATR (ENSCMIG00000006960) #16	PAQR9 (ENSCMIG00000006951)	pls1 (ENSCMIG00000006943) #18	trpc1 (ENSCMIG00000006917) #19	pcolce2b (ENSCMIG00000006877) #20	u2surp (ENSCMIG00000006777) #22	chst2a (ENSCMIG00000006759) #23	ENSCMIG00000006756 #24	ENSCMIG00000006753	dipk2aa (ENSCMIG00000006751) #25	plod2 (ENSCMIG00000006087) #36	PLSCR1 (ENSCMIG00000005744)	ENSCMIG00000005741	ENSCMIG00000005738	zic1 (ENSCMIG00000005733)	ENSCMIG00000005729	MME (ENSCMIG00000005621)	ENSCMIG00000005578	GPR149 (ENSCMIG00000005572)	dhx36 (ENSCMIG00000005505)	ARHGEF26 (ENSCMIG00000005402)