Tetrapoda	ANCESTRAL SPECIES	118					ENSGT00950000182932.A.b.a.a.b ##14	ENSGT00390000002231	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000179269	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00940000161043	ENSGT00940000161413	ENSGT00980000198740	ENSGT01100000263535.a.a	ENSGT00510000048167.b.a	ENSGT00390000005650
Amniota	ANCESTRAL SPECIES	2										ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT01100000263535.a.a	ENSGT00940000159032
Mammalia	ANCESTRAL SPECIES	85									ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00980000198740	ENSGT00940000161413	ENSGT00940000161043	ENSGT01100000263535.a.a
Theria	ANCESTRAL SPECIES	13							ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT01100000263535.a.a	ENSGT00940000159032
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Boreoeutheria	ANCESTRAL SPECIES	15	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Carnivora	ANCESTRAL SPECIES	19	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Caniformia	ANCESTRAL SPECIES	18	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Canidae	ANCESTRAL SPECIES	25	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a.g #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832.bb #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000011648.b #33	ENSGT00390000001969.a #34	ENSGT00940000160958 #35	ENSGT00390000018096 #36	ENSGT00940000157025 #37	ENSGT00940000158175
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a.g #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832.bb #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418.r ##31	ENSGT00390000011648.b #33	ENSGT00390000001969.a #34	ENSGT00940000160958 #35	ENSGT00390000018096 #36	ENSGT00940000157025 #37	ENSGT00940000158175
Dog	MODERN SPECIES	8	TET3 (ENSCAFG00845021981) #7	DGUOK (ENSCAFG00845022132) #8	DGUOK (ENSCAFG00845022216) #9	DGUOK (ENSCAFG00845016795) #10	C2orf78 (ENSCAFG00845016915) #11	DUSP11 (ENSCAFG00845016992) #12	TPRKB (ENSCAFG00845017028) #13	ENSCAFG00845017071 #14	ENSCAFG00845017265 #15	EGR4 (ENSCAFG00845017716) #16	CCT7 (ENSCAFG00845017858) #17	FBXO41 (ENSCAFG00845018174) #18	PRADC1 (ENSCAFG00845018255) #19	SMYD5 (ENSCAFG00845018316) #20	NOTO (ENSCAFG00845018376) #21	RAB11FIP5 (ENSCAFG00845018418) #22	SFXN5 (ENSCAFG00845018555) #23	EMX1 (ENSCAFG00845018828) #24	SPR (ENSCAFG00845018873) #25	EXOC6B (ENSCAFG00845018998) #26	CYP26B1 (ENSCAFG00845019592) #27	DYSF (ENSCAFG00845019878) #28	ZNF638 (ENSCAFG00845020789) #29	PAIP2B (ENSCAFG00845021756) #30	NAGK (ENSCAFG00845021892) #31	SSBP1 (ENSCAFG00845022014) #32	PHTF1 (ENSCAFG00845022110) #33	ENSCAFG00845022567 #34	PTPN22 (ENSCAFG00845022702) #35	BCL2L15 (ENSCAFG00845023051) #36	AP4B1 (ENSCAFG00845023163) #37
Dingo	MODERN SPECIES	223	ENSCAFG00020013826	TET3 (ENSCAFG00020013787) #7	DGUOK (ENSCAFG00020013777) #8	ACTG2 (ENSCAFG00020013771) #9	STAMBP (ENSCAFG00020013759) #10	C2orf78 (ENSCAFG00020013726) #11	DUSP11 (ENSCAFG00020013715) #12	TPRKB (ENSCAFG00020013709) #13	ENSCAFG00020013703 #14	ALMS1 (ENSCAFG00020013689) #15	EGR4 (ENSCAFG00020013678) #16	ENSCAFG00020013613 #17	PRADC1 (ENSCAFG00020013607) #19	SMYD5 (ENSCAFG00020013605) #20	NOTO (ENSCAFG00020013603) #21	ENSCAFG00020013586 #22	ENSCAFG00020013584 #23	ENSCAFG00020013580 #23	EMX1 (ENSCAFG00020013576) #24	SPR (ENSCAFG00020013573) #25	EXOC6B (ENSCAFG00020012878) #26	CYP26B1 (ENSCAFG00020012792) #27	DYSF (ENSCAFG00020003287) #28	ENSCAFG00020002913	ZNF638 (ENSCAFG00020001829) #29	PAIP2B (ENSCAFG00020001597) #30	ENSCAFG00020001496 ##31	PHTF1 (ENSCAFG00020001471) #33	RSBN1 (ENSCAFG00020001416) #34	ENSCAFG00020001395 #35	BCL2L15 (ENSCAFG00020001388) #36
Red fox	MODERN SPECIES	16	TET3 (ENSVVUG00000004693) #7	DGUOK (ENSVVUG00000004734) #8	ACTG2 (ENSVVUG00000004752) #9	STAMBP (ENSVVUG00000004755) #10	CUNH2orf78 (ENSVVUG00000004761) #11	DUSP11 (ENSVVUG00000004768) #12	TPRKB (ENSVVUG00000004786) #13	ENSVVUG00000004791 #14	ALMS1 (ENSVVUG00000004856) #15	ENSVVUG00000005256	EGR4 (ENSVVUG00000005259) #16	FBXO41 (ENSVVUG00000005266) #18	ENSVVUG00000005352 #17	PRADC1 (ENSVVUG00000006845) #19	SMYD5 (ENSVVUG00000006859) #20	RAB11FIP5 (ENSVVUG00000006886) #22	SFXN5 (ENSVVUG00000006892) #23	EMX1 (ENSVVUG00000006929) #24	SPR (ENSVVUG00000006933) #25	EXOC6B (ENSVVUG00000006974) #26	CYP26B1 (ENSVVUG00000007121) #27	DYSF (ENSVVUG00000007163) #28	ZNF638 (ENSVVUG00000007369) #29	PAIP2B (ENSVVUG00000007493) #30	NAGK (ENSVVUG00000007503) #31	PHTF1 (ENSVVUG00000007517) #33	RSBN1 (ENSVVUG00000007530) #34	PTPN22 (ENSVVUG00000007537) #35	BCL2L15 (ENSVVUG00000007555) #36	AP4B1 (ENSVVUG00000007559) #37	DCLRE1B (ENSVVUG00000007565)
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Mustelinae	ANCESTRAL SPECIES	16	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Ferret	MODERN SPECIES	169	DGUOK (ENSMPUG00000007798) #8	ACTG2 (ENSMPUG00000007760) #9	ENSMPUG00000007753 #10	ENSMPUG00000007749 #10	C2orf78 (ENSMPUG00000007746) #11	DUSP11 (ENSMPUG00000007736) #12	TPRKB (ENSMPUG00000007712) #13	ENSMPUG00000018830 #14	ALMS1 (ENSMPUG00000007690) #15	EGR4 (ENSMPUG00000007684) #16	FBXO41 (ENSMPUG00000007635) #18	ENSMPUG00000007625 #17	PRADC1 (ENSMPUG00000007600) #19	SMYD5 (ENSMPUG00000007594) #20	ENSMPUG00000007587 #21	RAB11FIP5 (ENSMPUG00000007579) #22	SFXN5 (ENSMPUG00000007567) #23	EMX1 (ENSMPUG00000007523) #24	SPR (ENSMPUG00000007518) #25	EXOC6B (ENSMPUG00000007497) #26	CYP26B1 (ENSMPUG00000007487) #27	DYSF (ENSMPUG00000007451) #28	ZNF638 (ENSMPUG00000007422) #29	PAIP2B (ENSMPUG00000007392) #30	NAGK (ENSMPUG00000007382) #31	TEX261 (ENSMPUG00000007372)	ANKRD53 (ENSMPUG00000007343)	ATP6V1B1 (ENSMPUG00000007327)	VAX2 (ENSMPUG00000007308)	CD207 (ENSMPUG00000007303)	CLEC4F (ENSMPUG00000007288)
American mink	MODERN SPECIES	8	DGUOK (ENSNVIG00000001569) #8	ENSNVIG00000001614 #9	ACTG2 (ENSNVIG00000001643) #9	STAMBP (ENSNVIG00000001652) #10	C2orf78 (ENSNVIG00000001681) #11	ENSNVIG00000001724 #12	TPRKB (ENSNVIG00000001758) #13	ENSNVIG00000001774 #14	ALMS1 (ENSNVIG00000001799) #15	EGR4 (ENSNVIG00000001884) #16	FBXO41 (ENSNVIG00000001892) #18	CCT7 (ENSNVIG00000001907) #17	ENSNVIG00000001955	PRADC1 (ENSNVIG00000001965) #19	SMYD5 (ENSNVIG00000001979) #20	RAB11FIP5 (ENSNVIG00000001990) #22	SFXN5 (ENSNVIG00000002039) #23	EMX1 (ENSNVIG00000002139) #24	SPR (ENSNVIG00000002152) #25	EXOC6B (ENSNVIG00000002176) #26	CYP26B1 (ENSNVIG00000002295) #27	DYSF (ENSNVIG00000002357) #28	ZNF638 (ENSNVIG00000002827) #29	PAIP2B (ENSNVIG00000002911) #30	ENSNVIG00000002919	NAGK (ENSNVIG00000002923) #31	TEX261 (ENSNVIG00000002954)	ENSNVIG00000002965	ATP6V1B1 (ENSNVIG00000002989)	VAX2 (ENSNVIG00000003033)	CD207 (ENSNVIG00000003052)
Ursidae	ANCESTRAL SPECIES	9	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Giant Panda	MODERN SPECIES	14	TET3 (ENSAMEG00000017366) #7	DGUOK (ENSAMEG00000017371) #8	ACTG2 (ENSAMEG00000028996) #9	STAMBP (ENSAMEG00000017396) #10	C2orf78 (ENSAMEG00000017402) #11	DUSP11 (ENSAMEG00000017403) #12	TPRKB (ENSAMEG00000017408) #13	ENSAMEG00000019286 #14	ALMS1 (ENSAMEG00000017415) #15	EGR4 (ENSAMEG00000026301) #16	FBXO41 (ENSAMEG00000015526) #18	CCT7 (ENSAMEG00000015536) #17	PRADC1 (ENSAMEG00000015564) #19	SMYD5 (ENSAMEG00000015577) #20	NOTO (ENSAMEG00000023952) #21	RAB11FIP5 (ENSAMEG00000015601) #22	SFXN5 (ENSAMEG00000015608) #23	EMX1 (ENSAMEG00000015623) #24	SPR (ENSAMEG00000015632) #25	EXOC6B (ENSAMEG00000015638) #26	CYP26B1 (ENSAMEG00000015648) #27	DYSF (ENSAMEG00000015669) #28	ENSAMEG00000015791 #29	ENSAMEG00000015825 #30	ENSAMEG00000015828 #31	TEX261 (ENSAMEG00000015850)	ANKRD53 (ENSAMEG00000015860)	ATP6V1B1 (ENSAMEG00000015864)	CD207 (ENSAMEG00000015917)	CLEC4F (ENSAMEG00000015928)	FIGLA (ENSAMEG00000015931)
Ursus	ANCESTRAL SPECIES	55	ENSGT01050000244898.b.a.d	ENSGT00390000013048	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01010000224802	ENSGT00950000186197
American black bear	MODERN SPECIES	4071												CCT7 (ENSUAMG00000027089) #17	PRADC1 (ENSUAMG00000027088) #19	SMYD5 (ENSUAMG00000027087) #20	NOTO (ENSUAMG00000027086) #21	RAB11FIP5 (ENSUAMG00000027083) #22	ENSUAMG00000027079	ENSUAMG00000027077
Polar bear	MODERN SPECIES	223	ENSUMAG00000001033	ENSUMAG00000001026	BOLA3 (ENSUMAG00000000994)	TET3 (ENSUMAG00000000860) #7	DGUOK (ENSUMAG00000000851) #8	ACTG2 (ENSUMAG00000000842) #9	STAMBP (ENSUMAG00000000830) #10	C2orf78 (ENSUMAG00000000783) #11	DUSP11 (ENSUMAG00000000773) #12	TPRKB (ENSUMAG00000000766) #13	ENSUMAG00000000732 #14	ALMS1 (ENSUMAG00000000241) #15	CCT7 (ENSUMAG00000000190) #17	PRADC1 (ENSUMAG00000000082) #19	SMYD5 (ENSUMAG00000022624) #20	ENSUMAG00000022616 #22	ENSUMAG00000022614	ENSUMAG00000022611	SFXN5 (ENSUMAG00000022607) #23	EXOC6B (ENSUMAG00000022588) #26	CYP26B1 (ENSUMAG00000022579) #27	DYSF (ENSUMAG00000022152) #28	ZNF638 (ENSUMAG00000021680) #29	PAIP2B (ENSUMAG00000021581) #30	NAGK (ENSUMAG00000021579) #31	TEX261 (ENSUMAG00000021576)	ANKRD53 (ENSUMAG00000021574)	ATP6V1B1 (ENSUMAG00000021544)	ENSUMAG00000021527	CD207 (ENSUMAG00000021512)	CLEC4F (ENSUMAG00000021505)
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Panthera	ANCESTRAL SPECIES	2	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
lion	MODERN SPECIES	3	TET3 (ENSPLOG00000007745) #7	DGUOK (ENSPLOG00000007822) #8	ACTG2 (ENSPLOG00000007866) #9	STAMBP (ENSPLOG00000007940) #10	C2orf78 (ENSPLOG00000007990) #11	DUSP11 (ENSPLOG00000008008) #12	TPRKB (ENSPLOG00000008033) #13	ENSPLOG00000008064 #14	ALMS1 (ENSPLOG00000008213) #15	ENSPLOG00000008687	EGR4 (ENSPLOG00000008716) #16	FBXO41 (ENSPLOG00000008768) #18	CCT7 (ENSPLOG00000008871) #17	PRADC1 (ENSPLOG00000009028) #19	SMYD5 (ENSPLOG00000009058) #20	RAB11FIP5 (ENSPLOG00000009184) #22	SFXN5 (ENSPLOG00000009249) #23	EMX1 (ENSPLOG00000009413) #24	SPR (ENSPLOG00000009441) #25	EXOC6B (ENSPLOG00000009485) #26	CYP26B1 (ENSPLOG00000009547) #27	DYSF (ENSPLOG00000009793) #28	ZNF638 (ENSPLOG00000010684) #29	PAIP2B (ENSPLOG00000010912) #30	NAGK (ENSPLOG00000010964) #31	ENSPLOG00000011032	ANKRD53 (ENSPLOG00000011085)	ATP6V1B1 (ENSPLOG00000011155)	VAX2 (ENSPLOG00000011369)	CD207 (ENSPLOG00000011422)	CLEC4F (ENSPLOG00000011489)
leopard	MODERN SPECIES		BOLA3 (ENSPPRG00000008520)	TET3 (ENSPPRG00000008582) #7	DGUOK (ENSPPRG00000008629) #8	ACTG2 (ENSPPRG00000008672) #9	STAMBP (ENSPPRG00000008689) #10	C2orf78 (ENSPPRG00000008697) #11	DUSP11 (ENSPPRG00000008784) #12	TPRKB (ENSPPRG00000008793) #13	ALMS1 (ENSPPRG00000009002) #15	EGR4 (ENSPPRG00000009035) #16	FBXO41 (ENSPPRG00000009048) #18	CCT7 (ENSPPRG00000009364) #17	PRADC1 (ENSPPRG00000009407) #19	SMYD5 (ENSPPRG00000009452) #20	NOTO (ENSPPRG00000009456) #21	RAB11FIP5 (ENSPPRG00000009467) #22	SFXN5 (ENSPPRG00000009560) #23	EMX1 (ENSPPRG00000009595) #24	SPR (ENSPPRG00000009602) #25	EXOC6B (ENSPPRG00000009694) #26	CYP26B1 (ENSPPRG00000009723) #27	DYSF (ENSPPRG00000010355) #28	ZNF638 (ENSPPRG00000010571) #29	PAIP2B (ENSPPRG00000010629) #30	NAGK (ENSPPRG00000010684) #31	TEX261 (ENSPPRG00000010712)	ANKRD53 (ENSPPRG00000010773)	ATP6V1B1 (ENSPPRG00000010881)	VAX2 (ENSPPRG00000010904)	CD207 (ENSPPRG00000010916)	CLEC4F (ENSPPRG00000010987)
Tiger	MODERN SPECIES	184	MOB1A (ENSPTIG00000013429)	BOLA3 (ENSPTIG00000013195)	TET3 (ENSPTIG00000011460) #7	DGUOK (ENSPTIG00000010602) #8	ACTG2 (ENSPTIG00000008364) #9	STAMBP (ENSPTIG00000006067) #10	C2orf78 (ENSPTIG00000005375) #11	DUSP11 (ENSPTIG00000002808) #12	TPRKB (ENSPTIG00000000176) #13	ALMS1 (ENSPTIG00000021587) #15	EGR4 (ENSPTIG00000021273) #16	FBXO41 (ENSPTIG00000016868) #18	CCT7 (ENSPTIG00000007785) #17	PRADC1 (ENSPTIG00000006855) #19	SMYD5 (ENSPTIG00000005714) #20	RAB11FIP5 (ENSPTIG00000020981) #22	SFXN5 (ENSPTIG00000018559) #23	SPR (ENSPTIG00000018155) #25	EXOC6B (ENSPTIG00000014700) #26	CYP26B1 (ENSPTIG00000013990) #27	DYSF (ENSPTIG00000003622) #28	ZNF638 (ENSPTIG00000019660) #29	PAIP2B (ENSPTIG00000019330) #30	NAGK (ENSPTIG00000018317) #31	TEX261 (ENSPTIG00000017566)	ANKRD53 (ENSPTIG00000014832)	ATP6V1B1 (ENSPTIG00000013454)	VAX2 (ENSPTIG00000012134)	CD207 (ENSPTIG00000011470)	CLEC4F (ENSPTIG00000008230)	FIGLA (ENSPTIG00000006679)
Cat	MODERN SPECIES	2	TET3 (ENSFCAG00000024678) #7	DGUOK (ENSFCAG00000012099) #8	ACTG2 (ENSFCAG00000012098) #9	STAMBP (ENSFCAG00000012097) #10	CA3H2orf78 (ENSFCAG00000026552) #11	DUSP11 (ENSFCAG00000019224) #12	TPRKB (ENSFCAG00000045186) #13	ENSFCAG00000046252 #14	ALMS1 (ENSFCAG00000008756) #15	EGR4 (ENSFCAG00000043837) #16	FBXO41 (ENSFCAG00000009398) #18	CCT7 (ENSFCAG00000013709) #17	PRADC1 (ENSFCAG00000009396) #19	SMYD5 (ENSFCAG00000009392) #20	NOTO (ENSFCAG00000044993) #21	RAB11FIP5 (ENSFCAG00000028676) #22	SFXN5 (ENSFCAG00000011407) #23	EMX1 (ENSFCAG00000046050) #24	SPR (ENSFCAG00000037792) #25	EXOC6B (ENSFCAG00000014559) #26	CYP26B1 (ENSFCAG00000026867) #27	DYSF (ENSFCAG00000004357) #28	ZNF638 (ENSFCAG00000004356) #29	PAIP2B (ENSFCAG00000033101) #30	NAGK (ENSFCAG00000028316) #31	TEX261 (ENSFCAG00000013457)	ANKRD53 (ENSFCAG00000013456)	ATP6V1B1 (ENSFCAG00000013451)	VAX2 (ENSFCAG00000013449)	CD207 (ENSFCAG00000013447)	CLEC4F (ENSFCAG00000025968)
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Equus	ANCESTRAL SPECIES	7	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208.k.b #11	ENSGT00390000014208.k.a.a #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.t #14	ENSGT00950000182932.A.a.s #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Horse	MODERN SPECIES	6	STAMBP (ENSECAG00000002320) #10	ENSECAG00000021118 #11	ENSECAG00000035927 #11	DUSP11 (ENSECAG00000023353) #12	ENSECAG00000023139 #11	TPRKB (ENSECAG00000007070) #13	ENSECAG00000031486 #14	ENSECAG00000035475 #14	ALMS1 (ENSECAG00000007763) #15	EGR4 (ENSECAG00000010604) #16	FBXO41 (ENSECAG00000011244) #18	CCT7 (ENSECAG00000017145) #17	PRADC1 (ENSECAG00000018201) #19	SMYD5 (ENSECAG00000022486) #20	NOTO (ENSECAG00000036299) #21	RAB11FIP5 (ENSECAG00000007084) #22	SFXN5 (ENSECAG00000008020) #23	EMX1 (ENSECAG00000038465) #24	SPR (ENSECAG00000018793) #25	EXOC6B (ENSECAG00000019424) #26	CYP26B1 (ENSECAG00000022724) #27	DYSF (ENSECAG00000006772) #28	ZNF638 (ENSECAG00000007715) #29	ENSECAG00000057557	PAIP2B (ENSECAG00000012841) #30	TEX261 (ENSECAG00000018768)	NAGK (ENSECAG00000013331) #31	ANKRD53 (ENSECAG00000022123)	VAX2 (ENSECAG00000019854)	CD207 (ENSECAG00000020972)	CLEC4F (ENSECAG00000023562)
Donkey	MODERN SPECIES	26	ENSEASG00005029327 #11	ENSEASG00005033720 #11	ENSEASG00005013799 #11	DUSP11 (ENSEASG00005015217) #12	TPRKB (ENSEASG00005015214) #13	ENSEASG00005015211 #14	ENSEASG00005028057 #14	ALMS1 (ENSEASG00005015195) #15	EGR4 (ENSEASG00005015188) #16	FBXO41 (ENSEASG00005015185) #18	ENSEASG00005035002	CCT7 (ENSEASG00005015184) #17	PRADC1 (ENSEASG00005015181) #19	SMYD5 (ENSEASG00005015177) #20	NOTO (ENSEASG00005015175) #21	RAB11FIP5 (ENSEASG00005015171) #22	SFXN5 (ENSEASG00005015165) #23	EMX1 (ENSEASG00005033310) #24	SPR (ENSEASG00005015160) #25	EXOC6B (ENSEASG00005015145) #26	CYP26B1 (ENSEASG00005015139) #27	DYSF (ENSEASG00005008484) #28	ENSEASG00005025089	ENSEASG00005007611 #29	ENSEASG00005007580 #30	ENSEASG00005007556 #31	TEX261 (ENSEASG00005027200)	ANKRD53 (ENSEASG00005037726)	ATP6V1B1 (ENSEASG00005007550)	VAX2 (ENSEASG00005036899)	CD207 (ENSEASG00005007545)
Chiroptera	ANCESTRAL SPECIES	10	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Microchiroptera	ANCESTRAL SPECIES	14	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Greater horseshoe bat	MODERN SPECIES	4	TET3 (ENSRFEG00010009872) #7	DGUOK (ENSRFEG00010009918) #8	ACTG2 (ENSRFEG00010010041) #9	STAMBP (ENSRFEG00010010151) #10	ENSRFEG00010010216 #14	ENSRFEG00010010234 #13	DUSP11 (ENSRFEG00010010274) #12	C2orf78 (ENSRFEG00010010460) #11	ALMS1 (ENSRFEG00010010872) #15	EGR4 (ENSRFEG00010010914) #16	FBXO41 (ENSRFEG00010010965) #18	CCT7 (ENSRFEG00010011024) #17	PRADC1 (ENSRFEG00010011293) #19	SMYD5 (ENSRFEG00010011342) #20	NOTO (ENSRFEG00010011407) #21	RAB11FIP5 (ENSRFEG00010011515) #22	SFXN5 (ENSRFEG00010011614) #23	EMX1 (ENSRFEG00010011714) #24	SPR (ENSRFEG00010011757) #25	EXOC6B (ENSRFEG00010011833) #26	CYP26B1 (ENSRFEG00010011956) #27	DYSF (ENSRFEG00010012159) #28	ZNF638 (ENSRFEG00010012797) #29	PAIP2B (ENSRFEG00010012864) #30	NAGK (ENSRFEG00010012908) #31	TEX261 (ENSRFEG00010013004)	ANKRD53 (ENSRFEG00010013070)	ATP6V1B1 (ENSRFEG00010013181)	VAX2 (ENSRFEG00010013606)	CD207 (ENSRFEG00010013735)	CLEC4F (ENSRFEG00010013827)
Microbat	MODERN SPECIES	1123	ENSMLUG00000026815 #7	DGUOK (ENSMLUG00000000589) #8	ACTG2 (ENSMLUG00000000582) #9	STAMBP (ENSMLUG00000000574) #10	ENSMLUG00000000581 #11	DUSP11 (ENSMLUG00000000561) #12	TPRKB (ENSMLUG00000000554) #13	ENSMLUG00000000550 #14	ENSMLUG00000000518 #15	ENSMLUG00000026289	FBXO41 (ENSMLUG00000013977) #18	CCT7 (ENSMLUG00000013970) #17	PRADC1 (ENSMLUG00000004590) #19	SMYD5 (ENSMLUG00000004578) #20	NOTO (ENSMLUG00000029720) #21	RAB11FIP5 (ENSMLUG00000015221) #22	SFXN5 (ENSMLUG00000015210) #23	EMX1 (ENSMLUG00000025017) #24	ENSMLUG00000014947 #25	ENSMLUG00000002040 #26	ENSMLUG00000025966	ENSMLUG00000024461 #26	CYP26B1 (ENSMLUG00000015136) #27	DYSF (ENSMLUG00000011942) #28	ZNF638 (ENSMLUG00000011904) #29
Megabat	MODERN SPECIES	87																RAB11FIP5 (ENSPVAG00000016388) #22	SFXN5 (ENSPVAG00000016385) #23	EMX1 (ENSPVAG00000016384) #24	SPR (ENSPVAG00000016383) #25
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Suina	ANCESTRAL SPECIES	13	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Pig	MODERN SPECIES	11	TET3 (ENSSSCG00000008292) #7	DGUOK (ENSSSCG00000008293) #8	ACTG2 (ENSSSCG00000008294) #9	STAMBP (ENSSSCG00000008300) #10	ENSSSCG00000008299 #11	DUSP11 (ENSSSCG00000008298) #12	TPRKB (ENSSSCG00000008297) #13	ENSSSCG00000021579 #14	ALMS1 (ENSSSCG00000037977) #15	EGR4 (ENSSSCG00000060151) #16	FBXO41 (ENSSSCG00000008302) #18	CCT7 (ENSSSCG00000008303) #17	PRADC1 (ENSSSCG00000008304) #19	SMYD5 (ENSSSCG00000008305) #20	NOTO (ENSSSCG00000059555) #21	RAB11FIP5 (ENSSSCG00000022162) #22	SFXN5 (ENSSSCG00000008307) #23	EMX1 (ENSSSCG00000008308) #24	SPR (ENSSSCG00000008309) #25	ENSSSCG00000036942	EXOC6B (ENSSSCG00000008310) #26	ENSSSCG00000048602	ENSSSCG00000047106	CYP26B1 (ENSSSCG00000008311) #27	DYSF (ENSSSCG00000008312) #28	ZNF638 (ENSSSCG00000022708) #29	PAIP2B (ENSSSCG00000038394) #30	NAGK (ENSSSCG00000008316) #31	TEX261 (ENSSSCG00000008317)	ANKRD53 (ENSSSCG00000058412)	ATP6V1B1 (ENSSSCG00000008314)
Chacoan peccary	MODERN SPECIES	777	BOLA3 (ENSCWAG00000015006)	TET3 (ENSCWAG00000014867) #7	DGUOK (ENSCWAG00000014788) #8	ACTG2 (ENSCWAG00000014708) #9	STAMBP (ENSCWAG00000014657) #10	C2orf78 (ENSCWAG00000014352) #11	DUSP11 (ENSCWAG00000014239) #12	TPRKB (ENSCWAG00000014197) #13	ALMS1 (ENSCWAG00000010464) #15	EGR4 (ENSCWAG00000010340) #16	FBXO41 (ENSCWAG00000010252) #18	CCT7 (ENSCWAG00000009988) #17	PRADC1 (ENSCWAG00000009950) #19	SMYD5 (ENSCWAG00000009863) #20	NOTO (ENSCWAG00000009831) #21	RAB11FIP5 (ENSCWAG00000009764) #22	SFXN5 (ENSCWAG00000009581) #23	EMX1 (ENSCWAG00000009546) #24	SPR (ENSCWAG00000009506) #25	ENSCWAG00000009475	EXOC6B (ENSCWAG00000009172) #26	CYP26B1 (ENSCWAG00000009021) #27	DYSF (ENSCWAG00000005228) #28	ZNF638 (ENSCWAG00000004725) #29	PAIP2B (ENSCWAG00000004640) #30	NAGK (ENSCWAG00000004572) #31	TEX261 (ENSCWAG00000004550)	ANKRD53 (ENSCWAG00000004514)	ATP6V1B1 (ENSCWAG00000004376)	VAX2 (ENSCWAG00000004344)	CD207 (ENSCWAG00000004304)
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Camelidae	ANCESTRAL SPECIES	12											ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161863	ENSGT01030000234575.d.c	ENSGT00440000033552
Arabian camel	MODERN SPECIES	6	ENSCDRG00005005318	DCTN1 (ENSCDRG00005004787)	ENSCDRG00005004727	ENSCDRG00005004694	ENSCDRG00005004682	ENSCDRG00005004675	ENSCDRG00005004644	ENSCDRG00005004616	ALMS1 (ENSCDRG00005004228) #15	EGR4 (ENSCDRG00005004141) #16	FBXO41 (ENSCDRG00005004046) #18	CCT7 (ENSCDRG00005003801) #17	PRADC1 (ENSCDRG00005003767) #19	SMYD5 (ENSCDRG00005003705) #20	NOTO (ENSCDRG00005003672) #21	RAB11FIP5 (ENSCDRG00005003613) #22	SFXN5 (ENSCDRG00005003439) #23	EMX1 (ENSCDRG00005018536) #24	SPR (ENSCDRG00005018514) #25	ENSCDRG00005018472	EXOC6B (ENSCDRG00005018306) #26	CYP26B1 (ENSCDRG00005018203) #27	DYSF (ENSCDRG00005012740) #28	ZNF638 (ENSCDRG00005011858) #29	PAIP2B (ENSCDRG00005011797) #30	NAGK (ENSCDRG00005011715) #31	ENSCDRG00005011551	ANKRD53 (ENSCDRG00005011486)	ATP6V1B1 (ENSCDRG00005011315)	CD207 (ENSCDRG00005011074)	CLEC4F (ENSCDRG00005011013)
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.c.a	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863
Cetacea	ANCESTRAL SPECIES	16	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT01010000228891	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00390000009426.c.b	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418.m.a #31	ENSGT00390000010888.c.a.a	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863
Odontoceti	ANCESTRAL SPECIES	15	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT01010000228891	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00390000009426.c.b.b	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418.m.a #31	ENSGT00390000010888.c.a.a	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208.h #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT01010000228891	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00390000009426.c.b.b	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418.m.a #31	ENSGT00390000010888.c.a.a	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863
Dolphin	MODERN SPECIES	3668																RAB11FIP5 (ENSTTRG00000008476) #22	SFXN5 (ENSTTRG00000008533) #23	EMX1 (ENSTTRG00000008543) #24	SPR (ENSTTRG00000008547) #25
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00390000018085.a.a.a.a	ENSGT00940000153710.a #10	ENSGT00390000014208.h.b #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT01010000228891	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00390000009426.c.b.b	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418.m.a #31	ENSGT00390000010888.c.a.a	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863
Vaquita	MODERN SPECIES	4	TPRKB (ENSPSNG00000011166) #13	ENSPSNG00000011132	ENSPSNG00000011057	ENSPSNG00000011021	ENSPSNG00000010962	ENSPSNG00000010914	ENSPSNG00000010874	ALMS1 (ENSPSNG00000010790) #15	EGR4 (ENSPSNG00000010696) #16	FBXO41 (ENSPSNG00000010548) #18	ENSPSNG00000010519	CCT7 (ENSPSNG00000010258) #17	PRADC1 (ENSPSNG00000010164) #19	SMYD5 (ENSPSNG00000010059) #20	NOTO (ENSPSNG00000009962) #21	RAB11FIP5 (ENSPSNG00000009877) #22	SFXN5 (ENSPSNG00000009721) #23	EMX1 (ENSPSNG00000009636) #24	SPR (ENSPSNG00000009589) #25	ENSPSNG00000009570	EXOC6B (ENSPSNG00000009461) #26	CYP26B1 (ENSPSNG00000009334) #27	ENSPSNG00000009207	DYSF (ENSPSNG00000008698) #28	ENSPSNG00000008483 #29	PAIP2B (ENSPSNG00000008453) #30	NAGK (ENSPSNG00000008384) #31	ENSPSNG00000008331	ANKRD53 (ENSPSNG00000008260)	ATP6V1B1 (ENSPSNG00000008092)	VAX2 (ENSPSNG00000008039)
Monodontidae	ANCESTRAL SPECIES	13	ENSGT00390000014208.h.a #11	ENSGT00390000012942.g.a #13	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT01010000223994	ENSGT00940000153123.B #15	ENSGT00390000012561.b.i.a.a	ENSGT00390000012561.b.j.a	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT01010000228891	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00390000009426.c.a.b	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418.m.a #31	ENSGT00390000010888.c.a.a	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863
Beluga whale	MODERN SPECIES	42						ENSDLEG00000003911	ALMS1 (ENSDLEG00000003921) #15	ENSDLEG00000003954	EGR4 (ENSDLEG00000003960) #16	FBXO41 (ENSDLEG00000003966) #18	ENSDLEG00000003974	CCT7 (ENSDLEG00000003980) #17	PRADC1 (ENSDLEG00000003988) #19	SMYD5 (ENSDLEG00000003997) #20	NOTO (ENSDLEG00000004007) #21	RAB11FIP5 (ENSDLEG00000004018) #22	SFXN5 (ENSDLEG00000004029) #23	EMX1 (ENSDLEG00000004042) #24	SPR (ENSDLEG00000004052) #25	EXOC6B (ENSDLEG00000004074) #26	CYP26B1 (ENSDLEG00000004123) #27	ENSDLEG00000004127	DYSF (ENSDLEG00000004368) #28	ZNF638 (ENSDLEG00000004993) #29	PAIP2B (ENSDLEG00000005089) #30	NAGK (ENSDLEG00000005095) #31	ENSDLEG00000005119	ANKRD53 (ENSDLEG00000005126)	ATP6V1B1 (ENSDLEG00000005137)	VAX2 (ENSDLEG00000005165)	CD207 (ENSDLEG00000005170)
Narwhal	MODERN SPECIES	305	ACTG2 (ENSMMNG00015013296) #9	ENSMMNG00015013317	STAMBP (ENSMMNG00015013326) #10	ENSMMNG00015013342 #12	TPRKB (ENSMMNG00015013348) #13	ALMS1 (ENSMMNG00015013394) #15	ENSMMNG00015013492	ENSMMNG00015013499	ENSMMNG00015013508	EGR4 (ENSMMNG00015013520) #16	FBXO41 (ENSMMNG00015013531) #18	CCT7 (ENSMMNG00015013559) #17	PRADC1 (ENSMMNG00015013596) #19	SMYD5 (ENSMMNG00015013607) #20	NOTO (ENSMMNG00015013617) #21	RAB11FIP5 (ENSMMNG00015013643) #22	SFXN5 (ENSMMNG00015013672) #23	EMX1 (ENSMMNG00015013703) #24	SPR (ENSMMNG00015013712) #25	EXOC6B (ENSMMNG00015013751) #26	CYP26B1 (ENSMMNG00015013831) #27	ENSMMNG00015013852	DYSF (ENSMMNG00015013972) #28	ZNF638 (ENSMMNG00015014187) #29	PAIP2B (ENSMMNG00015014287) #30	ENSMMNG00015014300 #31	ENSMMNG00015014313	ANKRD53 (ENSMMNG00015014327)	ATP6V1B1 (ENSMMNG00015014343)	VAX2 (ENSMMNG00015014367)	CD207 (ENSMMNG00015014384)
Sperm whale	MODERN SPECIES	3	TET3 (ENSPCTG00005007466) #7	DGUOK (ENSPCTG00005007374) #8	ACTG2 (ENSPCTG00005007286) #9	STAMBP (ENSPCTG00005007250) #10	ENSPCTG00005007161 #12	ENSPCTG00005007011 #13	TPRKB (ENSPCTG00005006749) #13	ENSPCTG00005006717	ALMS1 (ENSPCTG00005006700) #15	EGR4 (ENSPCTG00005006675) #16	FBXO41 (ENSPCTG00005006576) #18	CCT7 (ENSPCTG00005006424) #17	PRADC1 (ENSPCTG00005006391) #19	SMYD5 (ENSPCTG00005006336) #20	NOTO (ENSPCTG00005006292) #21	RAB11FIP5 (ENSPCTG00005006274) #22	SFXN5 (ENSPCTG00005006225) #23	EMX1 (ENSPCTG00005006165) #24	SPR (ENSPCTG00005006150) #25	EXOC6B (ENSPCTG00005005874) #26	CYP26B1 (ENSPCTG00005005754) #27	ENSPCTG00005005726	DYSF (ENSPCTG00005004614) #28	ZNF638 (ENSPCTG00005004319) #29	PAIP2B (ENSPCTG00005004274) #30	NAGK (ENSPCTG00005004254) #31	TEX261 (ENSPCTG00005004230)	ANKRD53 (ENSPCTG00005004213)	ATP6V1B1 (ENSPCTG00005004176)	VAX2 (ENSPCTG00005004162)	CD207 (ENSPCTG00005004140)
Blue whale	MODERN SPECIES	4	M1AP (ENSBMSG00010013224)	SEMA4F (ENSBMSG00010013318)	HK2 (ENSBMSG00010013404)	ENSBMSG00010013428	ENSBMSG00010013461 #15	ENSBMSG00010013474	ENSBMSG00010013482	EGR4 (ENSBMSG00010013491) #16	FBXO41 (ENSBMSG00010013510) #18	ENSBMSG00010013530	CCT7 (ENSBMSG00010013558) #17	PRADC1 (ENSBMSG00010013595) #19	SMYD5 (ENSBMSG00010013610) #20	NOTO (ENSBMSG00010013622) #21	ENSBMSG00010013631	ENSBMSG00010013646 #22	SFXN5 (ENSBMSG00010013670) #23	EMX1 (ENSBMSG00010013704) #24	SPR (ENSBMSG00010013719) #25	EXOC6B (ENSBMSG00010013741) #26	ENSBMSG00010013784	CYP26B1 (ENSBMSG00010013812) #27	ENSBMSG00010013855	DYSF (ENSBMSG00010014213) #28	ZNF638 (ENSBMSG00010015052) #29	PAIP2B (ENSBMSG00010015091) #30	ENSBMSG00010015119 #31	ENSBMSG00010015178	ANKRD53 (ENSBMSG00010015198)	ATP6V1B1 (ENSBMSG00010015230)	CD207 (ENSBMSG00010015467)
Pecora	ANCESTRAL SPECIES	5	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Yarkand deer	MODERN SPECIES	2	ACTG2 (ENSCHYG00000010088) #9	STAMBP (ENSCHYG00000010407) #10	C2orf78 (ENSCHYG00000010488) #11	DUSP11 (ENSCHYG00000010719) #12	ENSCHYG00000010771	ENSCHYG00000010826 #13	ENSCHYG00000010852 #14	ALMS1 (ENSCHYG00000010932) #15	ENSCHYG00000011197	EGR4 (ENSCHYG00000011226) #16	FBXO41 (ENSCHYG00000011257) #18	CCT7 (ENSCHYG00000011344) #17	PRADC1 (ENSCHYG00000011521) #19	SMYD5 (ENSCHYG00000011592) #20	NOTO (ENSCHYG00000011685) #21	RAB11FIP5 (ENSCHYG00000011726) #22	SFXN5 (ENSCHYG00000011857) #23	EMX1 (ENSCHYG00000012554) #24	SPR (ENSCHYG00000012570) #25	ENSCHYG00000012610	EXOC6B (ENSCHYG00000012675) #26	CYP26B1 (ENSCHYG00000013123) #27	DYSF (ENSCHYG00000013339) #28	ENSCHYG00000014827	ZNF638 (ENSCHYG00000014926) #29	PAIP2B (ENSCHYG00000015921) #30	NAGK (ENSCHYG00000016059) #31	TEX261 (ENSCHYG00000016319)	ANKRD53 (ENSCHYG00000016414)	ATP6V1B1 (ENSCHYG00000016500)	VAX2 (ENSCHYG00000016653)
Percora_a	ANCESTRAL SPECIES	13	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158351.v.b.a	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Bos	ANCESTRAL SPECIES	5	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158351.v.a.b	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Bos_a	ANCESTRAL SPECIES	6	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158351.v.a.b	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Domestic yak	MODERN SPECIES	28	DGUOK (ENSBGRG00000010750) #8	ACTG2 (ENSBGRG00000010869) #9	STAMBP (ENSBGRG00000010994) #10	C2orf78 (ENSBGRG00000011124) #11	DUSP11 (ENSBGRG00000011168) #12	TPRKB (ENSBGRG00000011257) #13	ENSBGRG00000011299 #14	ALMS1 (ENSBGRG00000011405) #15	EGR4 (ENSBGRG00000012063) #16	FBXO41 (ENSBGRG00000012107) #18	CCT7 (ENSBGRG00000012276) #17	PRADC1 (ENSBGRG00000012675) #19	SMYD5 (ENSBGRG00000012766) #20	NOTO (ENSBGRG00000012980) #21	ENSBGRG00000013039	ENSBGRG00000013061 #22	SFXN5 (ENSBGRG00000013201) #23	EMX1 (ENSBGRG00000013419) #24	SPR (ENSBGRG00000013480) #25	EXOC6B (ENSBGRG00000013557) #26	ENSBGRG00000014348	ENSBGRG00000014352	CYP26B1 (ENSBGRG00000014376) #27	DYSF (ENSBGRG00000003746) #28	ZNF638 (ENSBGRG00000004990) #29	PAIP2B (ENSBGRG00000005130) #30	NAGK (ENSBGRG00000005162) #31	TEX261 (ENSBGRG00000005392)	ANKRD53 (ENSBGRG00000005512)	ATP6V1B1 (ENSBGRG00000005559)	VAX2 (ENSBGRG00000005640)
Wild yak	MODERN SPECIES	1272									ALMS1 (ENSBMUG00000003903) #15	EGR4 (ENSBMUG00000003677) #16	FBXO41 (ENSBMUG00000003663) #18	CCT7 (ENSBMUG00000003628) #17	PRADC1 (ENSBMUG00000003592) #19	SMYD5 (ENSBMUG00000003571) #20	ENSBMUG00000003534	RAB11FIP5 (ENSBMUG00000003503) #22	SFXN5 (ENSBMUG00000003469) #23	EMX1 (ENSBMUG00000003409) #24	SPR (ENSBMUG00000003391) #25	ENSBMUG00000003369 #26	ENSBMUG00000003341
Bos_b	ANCESTRAL SPECIES	9	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158351.v.a.b	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.d	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Cow	MODERN SPECIES	2	DGUOK (ENSBTAG00000012037) #8	ACTG2 (ENSBTAG00000015441) #9	STAMBP (ENSBTAG00000009600) #10	C11H2orf78 (ENSBTAG00000039878) #11	DUSP11 (ENSBTAG00000033255) #12	TPRKB (ENSBTAG00000011176) #13	ENSBTAG00000047969 #14	ALMS1 (ENSBTAG00000011172) #15	EGR4 (ENSBTAG00000024058) #16	FBXO41 (ENSBTAG00000012759) #18	CCT7 (ENSBTAG00000012756) #17	PRADC1 (ENSBTAG00000008765) #19	SMYD5 (ENSBTAG00000008764) #20	NOTO (ENSBTAG00000024061) #21	ENSBTAG00000008035	RAB11FIP5 (ENSBTAG00000006162) #22	SFXN5 (ENSBTAG00000050078) #23	ENSBTAG00000049635	EMX1 (ENSBTAG00000001866) #24	SPR (ENSBTAG00000021961) #25	EXOC6B (ENSBTAG00000020799) #26	ENSBTAG00000048355	CYP26B1 (ENSBTAG00000012212) #27	DYSF (ENSBTAG00000013290) #28	ZNF638 (ENSBTAG00000009242) #29	PAIP2B (ENSBTAG00000054656) #30	NAGK (ENSBTAG00000014668) #31	ENSBTAG00000048791	TEX261 (ENSBTAG00000002105)	ANKRD53 (ENSBTAG00000010623)	ATP6V1B1 (ENSBTAG00000010620)
Hybrid Bos Indicus	MODERN SPECIES	2	ENSBIXG00005010102	DGUOK (ENSBIXG00005010162) #8	STAMBP (ENSBIXG00005010049) #10	C2orf78 (ENSBIXG00005005469) #11	DUSP11 (ENSBIXG00005000676) #12	TPRKB (ENSBIXG00005009889) #13	ENSBIXG00005000661 #14	ALMS1 (ENSBIXG00005009864) #15	ENSBIXG00005009859	FBXO41 (ENSBIXG00005009845) #18	CCT7 (ENSBIXG00005009807) #17	PRADC1 (ENSBIXG00005009712) #19	SMYD5 (ENSBIXG00005009681) #20	NOTO (ENSBIXG00005009646) #21	ENSBIXG00005009627	RAB11FIP5 (ENSBIXG00005009593) #22	SFXN5 (ENSBIXG00005000531) #23	EMX1 (ENSBIXG00005009453) #24	SPR (ENSBIXG00005009442) #25	EXOC6B (ENSBIXG00005009364) #26	ENSBIXG00005009192	ENSBIXG00005000410	CYP26B1 (ENSBIXG00005009171) #27	DYSF (ENSBIXG00005009051) #28	ZNF638 (ENSBIXG00005008942) #29	PAIP2B (ENSBIXG00005008888) #30	NAGK (ENSBIXG00005008869) #31	TEX261 (ENSBIXG00005008848)	ANKRD53 (ENSBIXG00005008823)	ATP6V1B1 (ENSBIXG00005000269)	VAX2 (ENSBIXG00005008783)
American bison	MODERN SPECIES	3359	DGUOK (ENSBBBG00000019810) #8	ACTG2 (ENSBBBG00000019783) #9	ENSBBBG00000007674	STAMBP (ENSBBBG00000005157) #10	C2orf78 (ENSBBBG00000019690) #11	DUSP11 (ENSBBBG00000019674) #12	TPRKB (ENSBBBG00000005177) #13	ENSBBBG00000005194 #14	ALMS1 (ENSBBBG00000019633) #15	EGR4 (ENSBBBG00000019517) #16	FBXO41 (ENSBBBG00000005271) #18	CCT7 (ENSBBBG00000005241) #17	PRADC1 (ENSBBBG00000007274) #19	SMYD5 (ENSBBBG00000019385) #20	ENSBBBG00000009181	ENSBBBG00000019370 #22	SFXN5 (ENSBBBG00000019365) #23	EMX1 (ENSBBBG00000008305) #24	SPR (ENSBBBG00000005020) #25	EXOC6B (ENSBBBG00000005014) #26	CYP26B1 (ENSBBBG00000009166) #27	DYSF (ENSBBBG00000004956) #28	ZNF638 (ENSBBBG00000004788) #29	PAIP2B (ENSBBBG00000004763) #30	NAGK (ENSBBBG00000018876) #31	TEX261 (ENSBBBG00000018828)	ANKRD53 (ENSBBBG00000018807)	ATP6V1B1 (ENSBBBG00000018794)	VAX2 (ENSBBBG00000018769)	CD207 (ENSBBBG00000018751)	CLEC4F (ENSBBBG00000004688)
Caprinae	ANCESTRAL SPECIES	9	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.h #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.c.a	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Rambouillet Sheep	MODERN SPECIES	19	DGUOK (ENSOARG00020009927) #8	ACTG2 (ENSOARG00020009750) #9	STAMBP (ENSOARG00020009700) #10	C2orf78 (ENSOARG00020009560) #11	ENSOARG00020009509	DUSP11 (ENSOARG00020009238) #12	TPRKB (ENSOARG00020009150) #13	ENSOARG00020009085 #14	ALMS1 (ENSOARG00020008667) #15	EGR4 (ENSOARG00020008633) #16	FBXO41 (ENSOARG00020008548) #18	CCT7 (ENSOARG00020008379) #17	PRADC1 (ENSOARG00020008311) #19	SMYD5 (ENSOARG00020008246) #20	NOTO (ENSOARG00020008177) #21	ENSOARG00020008104 #22	SFXN5 (ENSOARG00020007916) #23	EMX1 (ENSOARG00020007856) #24	SPR (ENSOARG00020007832) #25	ENSOARG00020007772	EXOC6B (ENSOARG00020007215) #26	CYP26B1 (ENSOARG00020007013) #27	DYSF (ENSOARG00020005927) #28	PAIP2B (ENSOARG00020005747) #30	NAGK (ENSOARG00020005719) #31	TEX261 (ENSOARG00020005704)	ANKRD53 (ENSOARG00020005675)	ATP6V1B1 (ENSOARG00020005560)	VAX2 (ENSOARG00020005545)	CD207 (ENSOARG00020005507)	ENSOARG00020005471
Goat	MODERN SPECIES	2	BOLA3 (ENSCHIG00000025591)	TET3 (ENSCHIG00000019208) #7	DGUOK (ENSCHIG00000025152) #8	ACTG2 (ENSCHIG00000009143) #9	STAMBP (ENSCHIG00000025246) #10	DUSP11 (ENSCHIG00000026150) #12	TPRKB (ENSCHIG00000022063) #13	ENSCHIG00000008140 #14	ALMS1 (ENSCHIG00000013766) #15	EGR4 (ENSCHIG00000013591) #16	FBXO41 (ENSCHIG00000021300) #18	CCT7 (ENSCHIG00000022849) #17	PRADC1 (ENSCHIG00000009849) #19	SMYD5 (ENSCHIG00000009046) #20	ENSCHIG00000017682	ENSCHIG00000015693 #22	SFXN5 (ENSCHIG00000019942) #23	EMX1 (ENSCHIG00000011767) #24	SPR (ENSCHIG00000024080) #25	ENSCHIG00000020964 #26	ENSCHIG00000017225 #26	ENSCHIG00000016045 #26	CYP26B1 (ENSCHIG00000017070) #27	DYSF (ENSCHIG00000007595) #28	ENSCHIG00000022714 #29	ENSCHIG00000003741 #29	PAIP2B (ENSCHIG00000021303) #30	NAGK (ENSCHIG00000025409) #31	TEX261 (ENSCHIG00000009683)	ATP6V1B1 (ENSCHIG00000014286)	VAX2 (ENSCHIG00000011015)
Siberian musk deer	MODERN SPECIES	245	STAMBP (ENSMMSG00000012623) #10	ENSMMSG00000012574 #11	DUSP11 (ENSMMSG00000012547) #12	TPRKB (ENSMMSG00000012516) #13	ENSMMSG00000012487 #14	ENSMMSG00000012476	ENSMMSG00000012460	ALMS1 (ENSMMSG00000012378) #15	EGR4 (ENSMMSG00000012345) #16	FBXO41 (ENSMMSG00000012296) #18	CCT7 (ENSMMSG00000012134) #17	PRADC1 (ENSMMSG00000012089) #19	SMYD5 (ENSMMSG00000012006) #20	NOTO (ENSMMSG00000011977) #21	ENSMMSG00000011960	RAB11FIP5 (ENSMMSG00000011911) #22	SFXN5 (ENSMMSG00000011865) #23	EMX1 (ENSMMSG00000011835) #24	SPR (ENSMMSG00000011817) #25	ENSMMSG00000011805	ENSMMSG00000011790	ENSMMSG00000011778	ENSMMSG00000011755	EXOC6B (ENSMMSG00000011692) #26	CYP26B1 (ENSMMSG00000011619) #27	ENSMMSG00000011602	DYSF (ENSMMSG00000010731) #28	ENSMMSG00000010478 #29	PAIP2B (ENSMMSG00000010442) #30	NAGK (ENSMMSG00000010350) #31	ENSMMSG00000010318
Eulipotyphla	ANCESTRAL SPECIES	620																ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00440000033609 #25
Hedgehog	MODERN SPECIES	1792																RAB11FIP5 (ENSEEUG00000006919) #22	SFXN5 (ENSEEUG00000006558) #23	SPR (ENSEEUG00000006492) #25
Common shrew	MODERN SPECIES	2425																ENSSARG00000005838 #22
Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Glires	ANCESTRAL SPECIES	13	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Lagomorpha	ANCESTRAL SPECIES	10									ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT00440000033552
Pika	MODERN SPECIES	1864																RAB11FIP5 (ENSOPRG00000015921) #22	SFXN5 (ENSOPRG00000015902) #23	EMX1 (ENSOPRG00000015897) #24	SPR (ENSOPRG00000015888) #25	ENSOPRG00000015853 #26
Rabbit	MODERN SPECIES	11	ENSOCUG00000007256 #11	ENSOCUG00000000210 #11	DUSP11 (ENSOCUG00000003647) #12	ENSOCUG00000011429	ENSOCUG00000016251 #13	ENSOCUG00000025827 #14	ENSOCUG00000038542 #14	ALMS1 (ENSOCUG00000006224) #15	ENSOCUG00000026003	ENSOCUG00000021825	EGR4 (ENSOCUG00000002443) #16	CCT7 (ENSOCUG00000002429) #17	PRADC1 (ENSOCUG00000002428) #19	SMYD5 (ENSOCUG00000002421) #20	NOTO (ENSOCUG00000005360) #21	RAB11FIP5 (ENSOCUG00000000837) #22	ENSOCUG00000027648	EMX1 (ENSOCUG00000008208) #24	SPR (ENSOCUG00000000835) #25	ENSOCUG00000002515	EXOC6B (ENSOCUG00000015311) #26	ENSOCUG00000031957	CYP26B1 (ENSOCUG00000007620) #27	DYSF (ENSOCUG00000010062) #28	ENSOCUG00000032009	ZNF638 (ENSOCUG00000010045) #29	ENSOCUG00000020930	PAIP2B (ENSOCUG00000022370) #30	NAGK (ENSOCUG00000008901) #31	TEX261 (ENSOCUG00000008898)	ANKRD53 (ENSOCUG00000008891)
Rodentia	ANCESTRAL SPECIES	15	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g #14	ENSGT00950000182932.A.a.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g #14	ENSGT00950000182932.A.a.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Myomorpha	ANCESTRAL SPECIES	37	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g #14	ENSGT00950000182932.A.a.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Muroidea	ANCESTRAL SPECIES	38	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g.e.b #14	ENSGT00950000182932.A.a.g.e.a #14	ENSGT00950000182932.A.a.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00940000155847 #12	ENSGT00950000182932.A.a.g.e.b #14	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g.e.a.b #14	ENSGT00950000182932.A.a.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00940000155847 #12	ENSGT00950000182932.A.a.g.e.b #14	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g.e.a.a.b #14	ENSGT00950000182932.A.a.g.f #14	ENSGT00950000182932.A.a.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418.k #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00940000155847 #12	ENSGT00950000182932.A.a.g.e.b #14	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g.e.a.b #14	ENSGT00950000182932.A.a.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418.k #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863
Northern American deer mouse	MODERN SPECIES	16	ENSPEMG00000029148 #14	ENSPEMG00000009923 #14	ENSPEMG00000031248 #14	ENSPEMG00000000789 #14	ENSPEMG00000028305	ENSPEMG00000000337 #14	ENSPEMG00000027653 #14	ENSPEMG00000012472 #14	Alms1 (ENSPEMG00000014972) #15	Egr4 (ENSPEMG00000007342) #16	Fbxo41 (ENSPEMG00000009003) #18	ENSPEMG00000013514 #17	Pradc1 (ENSPEMG00000018253) #19	Smyd5 (ENSPEMG00000014513) #20	Noto (ENSPEMG00000016373) #21	Rab11fip5 (ENSPEMG00000000746) #22	Sfxn5 (ENSPEMG00000010868) #23	Emx1 (ENSPEMG00000028156) #24	Spr (ENSPEMG00000003695) #25	ENSPEMG00000028573	Exoc6b (ENSPEMG00000009769) #26	Cyp26b1 (ENSPEMG00000012591) #27	Dysf (ENSPEMG00000008372) #28	Zfp638 (ENSPEMG00000010423) #29	Paip2b (ENSPEMG00000006571) #30	Nagk (ENSPEMG00000003498) #31	Tex261 (ENSPEMG00000027878)	Ankrd53 (ENSPEMG00000012530)	Atp6v1b1 (ENSPEMG00000017795)	Vax2 (ENSPEMG00000007032)	Clec4f (ENSPEMG00000015547)
Prairie vole	MODERN SPECIES	145							Nat8 (ENSMOCG00000012106) #14	ENSMOCG00000018982 #14	ENSMOCG00000000887	Egr4 (ENSMOCG00000002957) #16	Fbxo41 (ENSMOCG00000019901) #18	Cct7 (ENSMOCG00000014728) #17	Pradc1 (ENSMOCG00000010019) #19	Smyd5 (ENSMOCG00000015838) #20	Noto (ENSMOCG00000008483) #21	Rab11fip5 (ENSMOCG00000012533) #22	Sfxn5 (ENSMOCG00000017641) #23	Emx1 (ENSMOCG00000006842) #24	ENSMOCG00000018996 #25	Exoc6b (ENSMOCG00000015396) #26	Cyp26b1 (ENSMOCG00000007479) #27	Dysf (ENSMOCG00000018685) #28	Zfp638 (ENSMOCG00000017661) #29	Paip2b (ENSMOCG00000018425) #30	Nagk (ENSMOCG00000016195) #31	Tex261 (ENSMOCG00000010188)	Ankrd53 (ENSMOCG00000003049)	Atp6v1b1 (ENSMOCG00000000515)	Vax2 (ENSMOCG00000021003)	Cd207 (ENSMOCG00000015649)
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00940000153710.a #10	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g.e.b.d #14	ENSGT00950000182932.A.a.g.e.a.a.b #14	ENSGT00950000182932.A.a.g.f #14	ENSGT00950000182932.A.a.g.e.b.c #14	ENSGT00950000182932.A.a.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418.k #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Golden Hamster	MODERN SPECIES	643	Dguok (ENSMAUG00000008795) #8	Actg2 (ENSMAUG00000019911) #9	Stambp (ENSMAUG00000010903) #10	Dusp11 (ENSMAUG00000002283) #12	ENSMAUG00000018599 #13	ENSMAUG00000020746 #14	ENSMAUG00000011843 #14	ENSMAUG00000021417 #14	ENSMAUG00000000771 #14	Egr4 (ENSMAUG00000002784) #16	Fbxo41 (ENSMAUG00000020316) #18	Cct7 (ENSMAUG00000020816) #17	Pradc1 (ENSMAUG00000020472) #19	Smyd5 (ENSMAUG00000010932) #20	Noto (ENSMAUG00000016601) #21	Rab11fip5 (ENSMAUG00000008864) #22	Sfxn5 (ENSMAUG00000015708) #23	Emx1 (ENSMAUG00000013681) #24	ENSMAUG00000021026 #25	Exoc6b (ENSMAUG00000020372) #26	Cyp26b1 (ENSMAUG00000001649) #27	Dysf (ENSMAUG00000019802) #28	Zfp638 (ENSMAUG00000009740) #29	Paip2b (ENSMAUG00000018430) #30	Nagk (ENSMAUG00000003821) #31	Tex261 (ENSMAUG00000021571)	Ankrd53 (ENSMAUG00000013167)	Atp6v1b1 (ENSMAUG00000018630)	Vax2 (ENSMAUG00000012914)	Cd207 (ENSMAUG00000010110)	Clec4f (ENSMAUG00000015531)
Chinese hamster chok1gshd	MODERN SPECIES	258	ENSCGRG00001022516	Il23r (ENSCGRG00001014663)	Tacstd2 (ENSCGRG00001014553)	ENSCGRG00001005025 #14	ENSCGRG00001015659 #14	Nat8 (ENSCGRG00001014825) #14	ENSCGRG00001021071 #14	ENSCGRG00001014806 #14	Alms1 (ENSCGRG00001012187) #15	Egr4 (ENSCGRG00001019685) #16	Fbxo41 (ENSCGRG00001012368) #18	Cct7 (ENSCGRG00001010276) #17	Pradc1 (ENSCGRG00001000839) #19	Smyd5 (ENSCGRG00001020548) #20	Noto (ENSCGRG00001019719) #21	Rab11fip5 (ENSCGRG00001015733) #22	Sfxn5 (ENSCGRG00001017617) #23	Emx1 (ENSCGRG00001015420) #24	ENSCGRG00001011461 #25	Slc4a5 (ENSCGRG00001007193)	Mthfd2 (ENSCGRG00001000285)	Mob1a (ENSCGRG00001019249)	Bola3 (ENSCGRG00001007264)	Tet3 (ENSCGRG00001020178) #7	Dguok (ENSCGRG00001016409) #8	Actg2 (ENSCGRG00001019931) #9	Stambp (ENSCGRG00001016952) #10	Dusp11 (ENSCGRG00001011740) #12	ENSCGRG00001013871 #14	Tprkb (ENSCGRG00001002334) #13	ENSCGRG00001000694 #14
Murinae	ANCESTRAL SPECIES	4	ENSGT00440000033552	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g.e.b #14	ENSGT00950000182932.A.a.g.e.a.a.b #14	ENSGT00950000182932.A.a.g.e.a.b #14	ENSGT00950000182932.A.a.g.e.a.a.a #14	ENSGT00950000182932.A.a.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Mus	ANCESTRAL SPECIES	12	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g.e.b #14	ENSGT00950000182932.A.a.g.e.a.a.b.a #14	ENSGT00950000182932.A.a.g.e.a.a.b.b #14	ENSGT00950000182932.A.a.g.e.a.b #14	ENSGT00950000182932.A.a.g.e.a.a.a #14	ENSGT00950000182932.A.a.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g.e.b #14	ENSGT00950000182932.A.a.g.e.a.a.b.a #14	ENSGT00950000182932.A.a.g.e.a.a.b.b #14	ENSGT00950000182932.A.a.g.e.a.b #14	ENSGT00950000182932.A.a.g.e.a.a.a #14	ENSGT00950000182932.A.a.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Mus_B	ANCESTRAL SPECIES	15	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g.e.b #14	ENSGT00950000182932.A.a.g.e.a.a.b.a #14	ENSGT00950000182932.A.a.g.e.a.a.b.b #14	ENSGT00950000182932.A.a.g.e.a.b #14	ENSGT00950000182932.A.a.g.e.a.a.a #14	ENSGT00950000182932.A.a.h.a.a.b #14	ENSGT00950000182932.A.a.h.a.b #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Mus_C	ANCESTRAL SPECIES	18	ENSGT00440000033552	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g.e.b #14	ENSGT00950000182932.A.a.g.e.a.a.b.a #14	ENSGT00950000182932.A.a.g.e.a.b #14	ENSGT00950000182932.A.a.g.e.a.a.a #14	ENSGT00950000182932.A.a.h.a.a.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
spretus	MODERN SPECIES	15	Nat8f1 (MGP_SPRETEiJ_G0029597) #14	MGP_SPRETEiJ_G0029596 #14	MGP_SPRETEiJ_G0029595 #14	Nat8 (MGP_SPRETEiJ_G0029594) #14	Nat8f5 (MGP_SPRETEiJ_G0029593) #14	MGP_SPRETEiJ_G0029592 #14	MGP_SPRETEiJ_G0029591 #14	Nat8f6 (MGP_SPRETEiJ_G0029590) #14	Alms1 (MGP_SPRETEiJ_G0029589) #15	Egr4 (MGP_SPRETEiJ_G0029588) #16	Fbxo41 (MGP_SPRETEiJ_G0029587) #18	Cct7 (MGP_SPRETEiJ_G0029586) #17	Pradc1 (MGP_SPRETEiJ_G0029585) #19	Smyd5 (MGP_SPRETEiJ_G0029584) #20	Noto (MGP_SPRETEiJ_G0029583) #21	Rab11fip5 (MGP_SPRETEiJ_G0029582) #22	Sfxn5 (MGP_SPRETEiJ_G0029581) #23	Emx1 (MGP_SPRETEiJ_G0029580) #24	Spr (MGP_SPRETEiJ_G0029579) #25	Exoc6b (MGP_SPRETEiJ_G0029577) #26	Cyp26b1 (MGP_SPRETEiJ_G0029576) #27	Dysf (MGP_SPRETEiJ_G0029575) #28	Zfp638 (MGP_SPRETEiJ_G0029574) #29	Paip2b (MGP_SPRETEiJ_G0029573) #30	Nagk (MGP_SPRETEiJ_G0029572) #31	Tex261 (MGP_SPRETEiJ_G0029571)	Ankrd53 (MGP_SPRETEiJ_G0029570)	Atp6v1b1 (MGP_SPRETEiJ_G0029569)	Vax2 (MGP_SPRETEiJ_G0029568)	Cd207 (MGP_SPRETEiJ_G0029567)	Clec4f (MGP_SPRETEiJ_G0029566)
Steppe mouse	MODERN SPECIES	2735									Alms1 (ENSMSIG00000032091) #15	Egr4 (ENSMSIG00000032092) #16	Fbxo41 (ENSMSIG00000032093) #18	Cct7 (ENSMSIG00000032094) #17	Pradc1 (ENSMSIG00000032095) #19	Smyd5 (ENSMSIG00000032096) #20	Noto (ENSMSIG00000032097) #21	Rab11fip5 (ENSMSIG00000032098) #22	Sfxn5 (ENSMSIG00000032100) #23	Emx1 (ENSMSIG00000032101) #24	Spr (ENSMSIG00000032103) #25	ENSMSIG00000032105	Exoc6b (ENSMSIG00000032106) #26
Mouse	MODERN SPECIES	15	Nat8f1 (ENSMUSG00000057103) #14	Nat8f4 (ENSMUSG00000068299) #14	Nat8f2 (ENSMUSG00000033634) #14	Nat8 (ENSMUSG00000030004) #14	Nat8f5 (ENSMUSG00000079494) #14	Nat8f6 (ENSMUSG00000079495) #14	Nat8f3 (ENSMUSG00000051262) #14	Nat8f7 (ENSMUSG00000089694) #14	Alms1 (ENSMUSG00000063810) #15	Egr4 (ENSMUSG00000071341) #16	Fbxo41 (ENSMUSG00000047013) #18	Cct7 (ENSMUSG00000030007) #17	Pradc1 (ENSMUSG00000030008) #19	Smyd5 (ENSMUSG00000033706) #20	Noto (ENSMUSG00000068302) #21	Rab11fip5 (ENSMUSG00000051343) #22	Sfxn5 (ENSMUSG00000033720) #23	Emx1 (ENSMUSG00000033726) #24	Spr (ENSMUSG00000033735) #25	Exoc6b (ENSMUSG00000033769) #26	Cyp26b1 (ENSMUSG00000063415) #27	Dysf (ENSMUSG00000033788) #28	Zfp638 (ENSMUSG00000030016) #29	Paip2b (ENSMUSG00000045896) #30	Nagk (ENSMUSG00000034744) #31	Tex261 (ENSMUSG00000014748)	Ankrd53 (ENSMUSG00000014747)	Atp6v1b1 (ENSMUSG00000006269)	Vax2 (ENSMUSG00000034777)	Cd207 (ENSMUSG00000034783)	Clec4f (ENSMUSG00000014542)
Ryukyu mouse	MODERN SPECIES	15	Add2 (MGP_CAROLIEiJ_G0028590)	MGP_CAROLIEiJ_G0028589	MGP_CAROLIEiJ_G0028588 #12	MGP_CAROLIEiJ_G0028587 #13	Nat8f1 (MGP_CAROLIEiJ_G0028586) #14	MGP_CAROLIEiJ_G0028584 #14	MGP_CAROLIEiJ_G0028585 #14	MGP_CAROLIEiJ_G0028583 #14	MGP_CAROLIEiJ_G0028582 #15	Egr4 (MGP_CAROLIEiJ_G0028581) #16	Fbxo41 (MGP_CAROLIEiJ_G0028580) #18	MGP_CAROLIEiJ_G0028579 #17	MGP_CAROLIEiJ_G0028578 #19	Smyd5 (MGP_CAROLIEiJ_G0028577) #20	Noto (MGP_CAROLIEiJ_G0028576) #21	Rab11fip5 (MGP_CAROLIEiJ_G0028575) #22	Sfxn5 (MGP_CAROLIEiJ_G0028574) #23	Emx1 (MGP_CAROLIEiJ_G0028573) #24	MGP_CAROLIEiJ_G0028572 #25	Exoc6b (MGP_CAROLIEiJ_G0028571) #26	Cyp26b1 (MGP_CAROLIEiJ_G0028570) #27	Dysf (MGP_CAROLIEiJ_G0028569) #28	Zfp638 (MGP_CAROLIEiJ_G0028568) #29	Paip2b (MGP_CAROLIEiJ_G0028567) #30	Nagk (MGP_CAROLIEiJ_G0028566) #31	Tex261 (MGP_CAROLIEiJ_G0028565)	Ankrd53 (MGP_CAROLIEiJ_G0028564)	Atp6v1b1 (MGP_CAROLIEiJ_G0028563)	Vax2 (MGP_CAROLIEiJ_G0028562)	Cd207 (MGP_CAROLIEiJ_G0028561)	Clec4f (MGP_CAROLIEiJ_G0028560)
Shrew mouse	MODERN SPECIES	11	MGP_PahariEiJ_G0022325 #14	MGP_PahariEiJ_G0022324 #14	Nat8f1 (MGP_PahariEiJ_G0022323) #14	Tprkb (MGP_PahariEiJ_G0022322) #13	Dusp11 (MGP_PahariEiJ_G0022321) #12	Nat8 (MGP_PahariEiJ_G0022320) #14	MGP_PahariEiJ_G0022319 #14	MGP_PahariEiJ_G0022318 #14	MGP_PahariEiJ_G0022317 #14	Alms1 (MGP_PahariEiJ_G0022316) #15	Egr4 (MGP_PahariEiJ_G0022315) #16	Fbxo41 (MGP_PahariEiJ_G0022314) #18	Cct7 (MGP_PahariEiJ_G0022313) #17	Smyd5 (MGP_PahariEiJ_G0022312) #20	Noto (MGP_PahariEiJ_G0022311) #21	Rab11fip5 (MGP_PahariEiJ_G0022310) #22	Sfxn5 (MGP_PahariEiJ_G0022309) #23	Emx1 (MGP_PahariEiJ_G0022308) #24	Spr (MGP_PahariEiJ_G0022307) #25	Exoc6b (MGP_PahariEiJ_G0022306) #26	Cyp26b1 (MGP_PahariEiJ_G0022305) #27	Dysf (MGP_PahariEiJ_G0022304) #28	Zfp638 (MGP_PahariEiJ_G0022303) #29	Paip2b (MGP_PahariEiJ_G0022302) #30	Nagk (MGP_PahariEiJ_G0022301) #31	Tex261 (MGP_PahariEiJ_G0022300)	Ankrd53 (MGP_PahariEiJ_G0022299)	Atp6v1b1 (MGP_PahariEiJ_G0022298)	Vax2 (MGP_PahariEiJ_G0022297)	Cd207 (MGP_PahariEiJ_G0022296)	Clec4f (MGP_PahariEiJ_G0022295)
Rat	MODERN SPECIES	14	Nat8b (ENSRNOG00000056962) #14	Tprkb (ENSRNOG00000050645) #13	Nat8f1 (ENSRNOG00000015799) #14	Nat8f4 (ENSRNOG00000070875) #14	Nat8f2 (ENSRNOG00000069710) #14	Nat8 (ENSRNOG00000063398) #14	Nat8f5 (ENSRNOG00000015768) #14	Nat8f3 (ENSRNOG00000067962) #14	Alms1 (ENSRNOG00000022343) #15	Egr4 (ENSRNOG00000015719) #16	Fbxo41 (ENSRNOG00000033202) #18	Cct7 (ENSRNOG00000015630) #17	Pradc1 (ENSRNOG00000050483) #19	Smyd5 (ENSRNOG00000015589) #20	Noto (ENSRNOG00000037863) #21	Rab11fip5 (ENSRNOG00000056009) #22	Sfxn5 (ENSRNOG00000037871) #23	Emx1 (ENSRNOG00000015493) #24	Spr-ps1 (ENSRNOG00000028235) #25	Spr (ENSRNOG00000015455) #25	Exoc6b (ENSRNOG00000059615) #26	Cyp26b1 (ENSRNOG00000015076) #27	Dysf (ENSRNOG00000032788) #28	Zfp638 (ENSRNOG00000014501) #29	Paip2b (ENSRNOG00000070386) #30	Nagk (ENSRNOG00000013911) #31	Ankrd53 (ENSRNOG00000021402)	Tex261 (ENSRNOG00000013712)	Atp6v1b1 (ENSRNOG00000013573)	Vax2 (ENSRNOG00000013261)	Cd207 (ENSRNOG00000013222)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1871	Tlx2 (ENSNGAG00000022815)	Dqx1 (ENSNGAG00000022609)	Aup1 (ENSNGAG00000021192)	Htra2 (ENSNGAG00000020588)	ENSNGAG00000007181	Dok1 (ENSNGAG00000004316)	M1ap (ENSNGAG00000024114)	Sema4f (ENSNGAG00000022767)	Hk2 (ENSNGAG00000013722)	Egr4 (ENSNGAG00000002193) #16	Fbxo41 (ENSNGAG00000019168) #18	Cct7 (ENSNGAG00000018805) #17	Pradc1 (ENSNGAG00000022973) #19	Smyd5 (ENSNGAG00000011517) #20	Noto (ENSNGAG00000005430) #21	Rab11fip5 (ENSNGAG00000015746) #22	Sfxn5 (ENSNGAG00000022575) #23	Emx1 (ENSNGAG00000019661) #24	ENSNGAG00000019431 #25	ENSNGAG00000022373	ENSNGAG00000012614	Exoc6b (ENSNGAG00000022129) #26	Cyp26b1 (ENSNGAG00000012506) #27	Dysf (ENSNGAG00000021698) #28	Zfp638 (ENSNGAG00000010848) #29	ENSNGAG00000023162	Paip2b (ENSNGAG00000017186) #30	Nagk (ENSNGAG00000013472) #31	Tex261 (ENSNGAG00000011378)	Ankrd53 (ENSNGAG00000018178)	Atp6v1b1 (ENSNGAG00000006115)
Lesser Egyptian jerboa	MODERN SPECIES	152	Tet3 (ENSJJAG00000016359) #7	Dguok (ENSJJAG00000021610) #8	Actg2 (ENSJJAG00000023277) #9	Dusp11 (ENSJJAG00000020134) #12	ENSJJAG00000020984	ENSJJAG00000000191 #13	ENSJJAG00000009627	ENSJJAG00000016602 #15	ENSJJAG00000007328	ENSJJAG00000011587	Egr4 (ENSJJAG00000011684) #16	Fbxo41 (ENSJJAG00000011920) #18	Cct7 (ENSJJAG00000014045) #17	Pradc1 (ENSJJAG00000017990) #19	Smyd5 (ENSJJAG00000014238) #20	ENSJJAG00000019618 #22	ENSJJAG00000000602 #23	Emx1 (ENSJJAG00000020514) #24	Spr (ENSJJAG00000021269) #25	Exoc6b (ENSJJAG00000010950) #26	Cyp26b1 (ENSJJAG00000012428) #27	ENSJJAG00000014474	Dysf (ENSJJAG00000018879) #28	Zfp638 (ENSJJAG00000016049) #29	Paip2b (ENSJJAG00000013814) #30	ENSJJAG00000014764	Nagk (ENSJJAG00000022896) #31	Tex261 (ENSJJAG00000000197)	Ankrd53 (ENSJJAG00000017497)	Atp6v1b1 (ENSJJAG00000020347)	Vax2 (ENSJJAG00000023332)
Kangaroo rat	MODERN SPECIES	536			Dusp11 (ENSDORG00000012506) #12	Tprkb (ENSDORG00000006518) #13	ENSDORG00000026079 #14	ENSDORG00000025913 #14	ENSDORG00000026462	ENSDORG00000013982 #14	Alms1 (ENSDORG00000014407) #15	Egr4 (ENSDORG00000024302) #16	Fbxo41 (ENSDORG00000015142) #18	Cct7 (ENSDORG00000015139) #17	Pradc1 (ENSDORG00000015138) #19	Smyd5 (ENSDORG00000015135) #20	Noto (ENSDORG00000015133) #21	ENSDORG00000024898 #22	Sfxn5 (ENSDORG00000006952) #23	Emx1 (ENSDORG00000006951) #24	ENSDORG00000009709 #26	ENSDORG00000014357	ENSDORG00000028668 #26	Cyp26b1 (ENSDORG00000005272) #27	Dysf (ENSDORG00000015056) #28	Zfp638 (ENSDORG00000007360) #29	ENSDORG00000025621
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g #14	ENSGT00950000182932.A.a.h.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A.r #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Sciuridae	ANCESTRAL SPECIES	16	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.u.a #13	ENSGT00950000182932.A.a.h.g #14	ENSGT00950000182932.A.a.g #14	ENSGT00950000182932.A.a.h.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A.r #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.b	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Marmotini	ANCESTRAL SPECIES	14			ENSGT00390000014208.u.b #11	ENSGT00940000155847 #12	ENSGT00390000012942.u.a #13	ENSGT00950000182932.A.a.h.g.a.a #14	ENSGT00950000182932.A.a.h.g.b.a #14	ENSGT00950000182932.A.a.g #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609.q #25	ENSGT00440000033609.r #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A.r #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.b	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863
Marmotini_b	ANCESTRAL SPECIES	44			ENSGT00390000014208.u.b #11	ENSGT00940000155847 #12	ENSGT00390000012942.u.a #13	ENSGT00950000182932.A.a.h.g.a.b #14	ENSGT00950000182932.A.a.h.g.a.a #14	ENSGT00950000182932.A.a.g #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609.q #25	ENSGT00440000033609.r #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A.r #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888.b	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863
Arctic ground squirrel	MODERN SPECIES	503							ENSUPAG00010002688 #14	ENSUPAG00010002708 #14	ENSUPAG00010002764 #15	EGR4 (ENSUPAG00010002783) #16	FBXO41 (ENSUPAG00010002791) #18	CCT7 (ENSUPAG00010002816) #17	PRADC1 (ENSUPAG00010002853) #19	SMYD5 (ENSUPAG00010002892) #20	NOTO (ENSUPAG00010002900) #21	RAB11FIP5 (ENSUPAG00010002906) #22	SFXN5 (ENSUPAG00010002916) #23	EMX1 (ENSUPAG00010002955) #24	ENSUPAG00010002962 #25	ENSUPAG00010002987 #25	EXOC6B (ENSUPAG00010002993) #26
Squirrel	MODERN SPECIES	91		ENSSTOG00000030943	ENSSTOG00000030163	DUSP11 (ENSSTOG00000022917) #12	TPRKB (ENSSTOG00000016406) #13	ENSSTOG00000034740 #14	ENSSTOG00000034715 #14	ENSSTOG00000031128 #14	ENSSTOG00000031710 #14	EGR4 (ENSSTOG00000023961) #16	FBXO41 (ENSSTOG00000011361) #18	CCT7 (ENSSTOG00000011349) #17	PRADC1 (ENSSTOG00000011345) #19	SMYD5 (ENSSTOG00000011336) #20	NOTO (ENSSTOG00000021867) #21	RAB11FIP5 (ENSSTOG00000023937) #22	SFXN5 (ENSSTOG00000002337) #23	EMX1 (ENSSTOG00000027476) #24	ENSSTOG00000031889 #25	ENSSTOG00000030144	ENSSTOG00000015385 #25	EXOC6B (ENSSTOG00000025926) #26	CYP26B1 (ENSSTOG00000021898) #27	DYSF (ENSSTOG00000015993) #28	ZNF638 (ENSSTOG00000003995) #29	PAIP2B (ENSSTOG00000003986) #30	NAGK (ENSSTOG00000003976) #31	TEX261 (ENSSTOG00000022032)	ATP6V1B1 (ENSSTOG00000007606)	VAX2 (ENSSTOG00000007595)	CD207 (ENSSTOG00000022452)
Alpin marmot	MODERN SPECIES	6	ENSMMMG00000023779 #11	ENSMMMG00000023788 #11	DUSP11 (ENSMMMG00000023792) #12	TPRKB (ENSMMMG00000023795) #13	ENSMMMG00000023800 #14	ENSMMMG00000023802 #14	ENSMMMG00000023805 #14	ENSMMMG00000023807 #14	ALMS1 (ENSMMMG00000000014) #15	EGR4 (ENSMMMG00000000036) #16	FBXO41 (ENSMMMG00000000040) #18	CCT7 (ENSMMMG00000000061) #17	PRADC1 (ENSMMMG00000000122) #19	SMYD5 (ENSMMMG00000000161) #20	NOTO (ENSMMMG00000000180) #21	RAB11FIP5 (ENSMMMG00000000200) #22	SFXN5 (ENSMMMG00000000237) #23	SPR (ENSMMMG00000000283) #25	EXOC6B (ENSMMMG00000000339) #26	ENSMMMG00000000391	CYP26B1 (ENSMMMG00000000421) #27	ENSMMMG00000000440	DYSF (ENSMMMG00000000630) #28	ZNF638 (ENSMMMG00000003356) #29	PAIP2B (ENSMMMG00000004342) #30	NAGK (ENSMMMG00000004369) #31	TEX261 (ENSMMMG00000004388)	ANKRD53 (ENSMMMG00000004397)	ATP6V1B1 (ENSMMMG00000004412)	VAX2 (ENSMMMG00000004432)	CD207 (ENSMMMG00000004444)
Eurasian red squirrel	MODERN SPECIES	5	ENSSVLG00005021441 #13	ENSSVLG00005021409 #14	ENSSVLG00005021369 #14	ENSSVLG00005021343 #14	ENSSVLG00005021303 #14	ENSSVLG00005021254 #14	ENSSVLG00005021211 #14	ENSSVLG00005021183 #14	ALMS1 (ENSSVLG00005020411) #15	EGR4 (ENSSVLG00005020282) #16	FBXO41 (ENSSVLG00005020161) #18	CCT7 (ENSSVLG00005019914) #17	PRADC1 (ENSSVLG00005019854) #19	SMYD5 (ENSSVLG00005019806) #20	NOTO (ENSSVLG00005019745) #21	RAB11FIP5 (ENSSVLG00005019671) #22	SFXN5 (ENSSVLG00005019474) #23	EMX1 (ENSSVLG00005019276) #24	ENSSVLG00005019237 #25	ENSSVLG00005019184 #25	ENSSVLG00005019111 #25	ENSSVLG00005019053 #25	ENSSVLG00005018987 #25	EXOC6B (ENSSVLG00005018863) #26	ENSSVLG00005018636 #27	ENSSVLG00005018496 #27	DYSF (ENSSVLG00005018248) #28	ZNF638 (ENSSVLG00005018146) #29	PAIP2B (ENSSVLG00005018040) #30	NAGK (ENSSVLG00005017949) #31	TEX261 (ENSSVLG00005017917)
Hystricomorpha	ANCESTRAL SPECIES	8	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g.b #14	ENSGT00950000182932.A.a.h.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832.w #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A.r #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Hystricomorpha_a	ANCESTRAL SPECIES	35	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g.b #14	ENSGT00950000182932.A.a.h.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832.w #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A.r #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Guinea pig	MODERN SPECIES	37	TET3 (ENSCPOG00000006855) #7	DGUOK (ENSCPOG00000006850) #8	ACTG2 (ENSCPOG00000030493) #9	STAMBP (ENSCPOG00000026090) #10	DUSP11 (ENSCPOG00000022539) #12	ENSCPOG00000031401 #13	ENSCPOG00000020957 #14	ENSCPOG00000002231 #14	ALMS1 (ENSCPOG00000037862) #15	EGR4 (ENSCPOG00000012218) #16	FBXO41 (ENSCPOG00000013056) #18	ENSCPOG00000019869 #17	PRADC1 (ENSCPOG00000013054) #19	SMYD5 (ENSCPOG00000013050) #20	NOTO (ENSCPOG00000032457) #21	ENSCPOG00000026289 #22	SFXN5 (ENSCPOG00000031020) #23	EMX1 (ENSCPOG00000033088) #24	SPR (ENSCPOG00000027095) #25	EXOC6B (ENSCPOG00000010694) #26	ENSCPOG00000033484	CYP26B1 (ENSCPOG00000006456) #27	DYSF (ENSCPOG00000010197) #28	ENSCPOG00000030713 #29	ENSCPOG00000031084	PAIP2B (ENSCPOG00000013310) #30	NAGK (ENSCPOG00000013306) #31	TEX261 (ENSCPOG00000036856)	ENSCPOG00000010451	ATP6V1B1 (ENSCPOG00000010441)	VAX2 (ENSCPOG00000019567)
Hystricomorpha_b	ANCESTRAL SPECIES	33	ENSGT00390000013048	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.g.b #14	ENSGT00950000182932.A.a.h.h #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832.w #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A.r #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Degu	MODERN SPECIES	99	MTHFD2 (ENSODEG00000012642)	MOB1A (ENSODEG00000011741)	BOLA3 (ENSODEG00000011150)	ENSODEG00000011131 #7	DGUOK (ENSODEG00000010133) #8	ACTG2 (ENSODEG00000010332) #9	STAMBP (ENSODEG00000009792) #10	DUSP11 (ENSODEG00000010512) #12	TPRKB (ENSODEG00000010574) #13	ENSODEG00000010127 #14	EGR4 (ENSODEG00000012949) #16	FBXO41 (ENSODEG00000009958) #18	ENSODEG00000010231 #17	PRADC1 (ENSODEG00000010022) #19	SMYD5 (ENSODEG00000010726) #20	ENSODEG00000010350 #22	SFXN5 (ENSODEG00000010566) #23	EMX1 (ENSODEG00000010819) #24	SPR (ENSODEG00000010527) #25	ENSODEG00000011087	EXOC6B (ENSODEG00000010227) #26	CYP26B1 (ENSODEG00000010299) #27	DYSF (ENSODEG00000011285) #28	ENSODEG00000019737	ZNF638 (ENSODEG00000010319) #29	PAIP2B (ENSODEG00000010177) #30	NAGK (ENSODEG00000014054) #31	TEX261 (ENSODEG00000009340)	ANKRD53 (ENSODEG00000010439)	ATP6V1B1 (ENSODEG00000011868)	VAX2 (ENSODEG00000009023)
Long-tailed chinchilla	MODERN SPECIES	131	DGUOK (ENSCLAG00000012038) #8	ACTG2 (ENSCLAG00000012485) #9	STAMBP (ENSCLAG00000008694) #10	ENSCLAG00000009482 #14	TPRKB (ENSCLAG00000007331) #13	DUSP11 (ENSCLAG00000008372) #12	ENSCLAG00000010601 #14	ENSCLAG00000011873 #14	ENSCLAG00000013225 #14	ALMS1 (ENSCLAG00000005052) #15	EGR4 (ENSCLAG00000007008) #16	FBXO41 (ENSCLAG00000007924) #18	ENSCLAG00000006963 #17	PRADC1 (ENSCLAG00000015320) #19	SMYD5 (ENSCLAG00000006061) #20	ENSCLAG00000007292 #22	SFXN5 (ENSCLAG00000007969) #23	EMX1 (ENSCLAG00000014206) #24	SPR (ENSCLAG00000017303) #25	ENSCLAG00000013672	ENSCLAG00000013568	EXOC6B (ENSCLAG00000014097) #26	CYP26B1 (ENSCLAG00000009262) #27	DYSF (ENSCLAG00000010254) #28	ZNF638 (ENSCLAG00000006418) #29	PAIP2B (ENSCLAG00000007720) #30	NAGK (ENSCLAG00000007916) #31	TEX261 (ENSCLAG00000008662)	ANKRD53 (ENSCLAG00000006293)	ATP6V1B1 (ENSCLAG00000007116)	VAX2 (ENSCLAG00000007615)
Naked mole-rat female	MODERN SPECIES	23	MOB1A (ENSHGLG00000008427)	BOLA3 (ENSHGLG00000004956)	TET3 (ENSHGLG00000006091) #7	DGUOK (ENSHGLG00000009167) #8	ACTG2 (ENSHGLG00000012685) #9	STAMBP (ENSHGLG00000014430) #10	ENSHGLG00000012325	DUSP11 (ENSHGLG00000012958) #12	ENSHGLG00000044724 #14	ENSHGLG00000039055 #14	EGR4 (ENSHGLG00000009021) #16	FBXO41 (ENSHGLG00000010102) #18	CCT7 (ENSHGLG00000011761) #17	PRADC1 (ENSHGLG00000015353) #19	SMYD5 (ENSHGLG00000015439) #20	RAB11FIP5 (ENSHGLG00000016021) #22	SFXN5 (ENSHGLG00000007851) #23	EMX1 (ENSHGLG00000036309) #24	SPR (ENSHGLG00000041182) #25	ENSHGLG00000006121	ENSHGLG00000040821	ENSHGLG00000032593	ENSHGLG00000039406	EXOC6B (ENSHGLG00000011639) #26	CYP26B1 (ENSHGLG00000016604) #27	ENSHGLG00000043383	DYSF (ENSHGLG00000007256) #28	ZNF638 (ENSHGLG00000015789) #29	ENSHGLG00000050708	ENSHGLG00000039175 #30	ENSHGLG00000015917 #31
Primates	ANCESTRAL SPECIES	14	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Haplorrhini	ANCESTRAL SPECIES	15	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Simiiformes	ANCESTRAL SPECIES	14	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT00910000147403	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00910000147533	ENSGT00550000074832 #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT00910000147403	ENSGT01030000234641.a.a #23	ENSGT00860000135756	ENSGT00910000148799	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a	ENSGT00510000047418 #31	ENSGT00390000010888
Hominoidea	ANCESTRAL SPECIES	18	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00910000147533	ENSGT00550000074832 #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT00910000147403	ENSGT01030000234641.a.a #23	ENSGT00860000135756	ENSGT00910000148799	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a	ENSGT00510000047418 #31	ENSGT00390000010888
Hominidae	ANCESTRAL SPECIES	19	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.l #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00910000147533	ENSGT00550000074832 #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT00910000147403	ENSGT01030000234641.a.a #23	ENSGT00860000135756	ENSGT00910000148799	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a	ENSGT00510000047418 #31	ENSGT00390000010888
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	18	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.l #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00910000147533	ENSGT00550000074832 #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT00910000147403	ENSGT01030000234641.a.a #23	ENSGT00860000135756	ENSGT00910000148799	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a	ENSGT00510000047418 #31	ENSGT00390000010888
Gorilla	MODERN SPECIES	14	DGUOK (ENSGGOG00000004004) #8	ACTG2 (ENSGGOG00000004001) #9	STAMBP (ENSGGOG00000002360) #10	C2orf78 (ENSGGOG00000004686) #11	DUSP11 (ENSGGOG00000010122) #12	TPRKB (ENSGGOG00000009062) #13	NAT8 (ENSGGOG00000013202) #14	ALMS1 (ENSGGOG00000013184) #15	EGR4 (ENSGGOG00000007221) #16	FBXO41 (ENSGGOG00000007779) #18	ENSGGOG00000037166	CCT7 (ENSGGOG00000007766) #17	PRADC1 (ENSGGOG00000007761) #19	SMYD5 (ENSGGOG00000007750) #20	NOTO (ENSGGOG00000014578) #21	RAB11FIP5 (ENSGGOG00000005265) #22	ENSGGOG00000037818	SFXN5 (ENSGGOG00000005256) #23	ENSGGOG00000042960	SPR (ENSGGOG00000005682) #25	EXOC6B (ENSGGOG00000000465) #26	CYP26B1 (ENSGGOG00000004577) #27	DYSF (ENSGGOG00000007201) #28	ZNF638 (ENSGGOG00000012511) #29	PAIP2B (ENSGGOG00000037950) #30	MPHOSPH10 (ENSGGOG00000003905)	MCEE (ENSGGOG00000024541)	NAGK (ENSGGOG00000012027) #31	TEX261 (ENSGGOG00000009565)	ANKRD53 (ENSGGOG00000009559)	ATP6V1B1 (ENSGGOG00000007294)
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.l #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00910000147533	ENSGT00550000074832 #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00910000147403	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00910000148799	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413
Pan	ANCESTRAL SPECIES	17	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.l #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00910000147533	ENSGT00550000074832 #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00910000147403	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00910000148799	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413
Chimpanzee	MODERN SPECIES	14	ACTG2 (ENSPTRG00000047394) #9	STAMBP (ENSPTRG00000012071) #10	C2AH2orf78 (ENSPTRG00000012070) #11	DUSP11 (ENSPTRG00000012069) #12	TPRKB (ENSPTRG00000012066) #13	NAT8 (ENSPTRG00000012064) #14	ALMS1 (ENSPTRG00000012063) #15	EGR4 (ENSPTRG00000012062) #16	ENSPTRG00000052465	FBXO41 (ENSPTRG00000012061) #18	CCT7 (ENSPTRG00000012060) #17	PRADC1 (ENSPTRG00000012059) #19	SMYD5 (ENSPTRG00000012058) #20	NOTO (ENSPTRG00000033777) #21	ENSPTRG00000048823	RAB11FIP5 (ENSPTRG00000012057) #22	ENSPTRG00000045407	SFXN5 (ENSPTRG00000012056) #23	EMX1 (ENSPTRG00000012055) #24	SPR (ENSPTRG00000050402) #25	EXOC6B (ENSPTRG00000012052) #26	CYP26B1 (ENSPTRG00000012051) #27	DYSF (ENSPTRG00000012049) #28	ZNF638 (ENSPTRG00000012048) #29	PAIP2B (ENSPTRG00000012046) #30	MPHOSPH10 (ENSPTRG00000012045)	MCEE (ENSPTRG00000012044)	NAGK (ENSPTRG00000012043) #31	TEX261 (ENSPTRG00000012040)	ANKRD53 (ENSPTRG00000012039)	ATP6V1B1 (ENSPTRG00000012038)
Bonobo	MODERN SPECIES	14	ACTG2 (ENSPPAG00000029255) #9	STAMBP (ENSPPAG00000009082) #10	C2orf78 (ENSPPAG00000037217) #11	DUSP11 (ENSPPAG00000040378) #12	TPRKB (ENSPPAG00000032257) #13	NAT8B (ENSPPAG00000029351) #14	NAT8 (ENSPPAG00000008679) #14	ALMS1 (ENSPPAG00000037321) #15	EGR4 (ENSPPAG00000034601) #16	FBXO41 (ENSPPAG00000014982) #18	ENSPPAG00000039050	CCT7 (ENSPPAG00000031783) #17	PRADC1 (ENSPPAG00000038026) #19	SMYD5 (ENSPPAG00000036998) #20	NOTO (ENSPPAG00000035881) #21	RAB11FIP5 (ENSPPAG00000029522) #22	ENSPPAG00000028544	ENSPPAG00000023177	ENSPPAG00000041216	ENSPPAG00000038563	ENSPPAG00000036394 #23	ENSPPAG00000001045 #24	SPR (ENSPPAG00000040168) #25	EXOC6B (ENSPPAG00000020760) #26	CYP26B1 (ENSPPAG00000031389) #27	ENSPPAG00000018681	DYSF (ENSPPAG00000035819) #28	ZNF638 (ENSPPAG00000039298) #29	PAIP2B (ENSPPAG00000037708) #30	MPHOSPH10 (ENSPPAG00000031855)	MCEE (ENSPPAG00000023678)
Human	MODERN SPECIES	11	DGUOK (ENSG00000114956) #8	ACTG2 (ENSG00000163017) #9	STAMBP (ENSG00000124356) #10	C2orf78 (ENSG00000187833) #11	DUSP11 (ENSG00000144048) #12	TPRKB (ENSG00000144034) #13	NAT8B (ENSG00000204872) #14	NAT8 (ENSG00000144035) #14	ALMS1 (ENSG00000116127) #15	EGR4 (ENSG00000135625) #16	FBXO41 (ENSG00000163013) #18	CCT7 (ENSG00000135624) #17	PRADC1 (ENSG00000135617) #19	SMYD5 (ENSG00000135632) #20	NOTO (ENSG00000214513) #21	RAB11FIP5 (ENSG00000135631) #22	SFXN5 (ENSG00000144040) #23	EMX1 (ENSG00000135638) #24	SPR (ENSG00000116096) #25	EXOC6B (ENSG00000144036) #26	CYP26B1 (ENSG00000003137) #27	DYSF (ENSG00000135636) #28	ZNF638 (ENSG00000075292) #29	PAIP2B (ENSG00000124374) #30	MPHOSPH10 (ENSG00000124383)	MCEE (ENSG00000124370)	NAGK (ENSG00000124357) #31	ANKRD53 (ENSG00000144031)	TEX261 (ENSG00000144043)	ENSG00000258881	ATP6V1B1 (ENSG00000116039)
Orangutan	MODERN SPECIES	14	ACTG2 (ENSPPYG00000012288) #9	STAMBP (ENSPPYG00000037955) #10	C2orf78 (ENSPPYG00000012290) #11	DUSP11 (ENSPPYG00000012291) #12	TPRKB (ENSPPYG00000012292) #13	ENSPPYG00000031594 #14	ENSPPYG00000038061 #14	NAT8 (ENSPPYG00000032222) #14	ALMS1 (ENSPPYG00000012294) #15	EGR4 (ENSPPYG00000034109) #16	FBXO41 (ENSPPYG00000012296) #18	CCT7 (ENSPPYG00000012297) #17	ENSPPYG00000033080 #19	SMYD5 (ENSPPYG00000036794) #20	NOTO (ENSPPYG00000041238) #21	RAB11FIP5 (ENSPPYG00000031548) #22	SFXN5 (ENSPPYG00000031025) #23	EMX1 (ENSPPYG00000012303) #24	SPR (ENSPPYG00000012304) #25	EXOC6B (ENSPPYG00000012306) #26	CYP26B1 (ENSPPYG00000031073) #27	DYSF (ENSPPYG00000012308) #28	ZNF638 (ENSPPYG00000029854) #29	PAIP2B (ENSPPYG00000030536) #30	MPHOSPH10 (ENSPPYG00000012310)	MCEE (ENSPPYG00000012311)	NAGK (ENSPPYG00000012312) #31	ENSPPYG00000037247	TEX261 (ENSPPYG00000012314)	ANKRD53 (ENSPPYG00000012315)	ATP6V1B1 (ENSPPYG00000012316)
Gibbon	MODERN SPECIES	4	SPECC1 (ENSNLEG00000013362)	PRPSAP2 (ENSNLEG00000013396)	ENSNLEG00000030347	ENSNLEG00000010480	SLC47A1 (ENSNLEG00000010765)	ALDH3A2 (ENSNLEG00000010712)	SLC47A2 (ENSNLEG00000010596)	ALDH3A1 (ENSNLEG00000010561)	ENSNLEG00000031018	ENSNLEG00000010557 #16	ENSNLEG00000010548 #18	CCT7 (ENSNLEG00000010414) #17	PRADC1 (ENSNLEG00000010408) #19	SMYD5 (ENSNLEG00000010394) #20	NOTO (ENSNLEG00000010391) #21	ENSNLEG00000010389 #22	SFXN5 (ENSNLEG00000027519) #23	EMX1 (ENSNLEG00000010370) #24	SPR (ENSNLEG00000035593) #25	EXOC6B (ENSNLEG00000010353) #26	CYP26B1 (ENSNLEG00000010340) #27	DYSF (ENSNLEG00000010311) #28	ZNF638 (ENSNLEG00000010274) #29	PAIP2B (ENSNLEG00000031125) #30	MPHOSPH10 (ENSNLEG00000010266)	MCEE (ENSNLEG00000010264)	NAGK (ENSNLEG00000027715) #31	TEX261 (ENSNLEG00000010250)	ANKRD53 (ENSNLEG00000010246)	ATP6V1B1 (ENSNLEG00000010231)	VAX2 (ENSNLEG00000010227)
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832.s #17	ENSGT00910000147533	ENSGT00550000074832.r.b #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT00910000147403	ENSGT01030000234641.a.a #23	ENSGT00860000135756	ENSGT00910000148799	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00390000003248.b.f	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a.g	ENSGT00510000047418 #31
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832.r.b #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT00910000147403	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00390000003248.b.f	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a.g	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832.r.b #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT00910000147403	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000013558.n	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00390000003248.b.f	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a.g	ENSGT00510000047418 #31	ENSGT00390000010888
Macaca	ANCESTRAL SPECIES	17	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832.r.b #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000013558.n	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a.g	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413
Pig-tailed macaque	MODERN SPECIES	341	TET3 (ENSMNEG00000028532) #7	DGUOK (ENSMNEG00000039030) #8	ACTG2 (ENSMNEG00000044375) #9	STAMBP (ENSMNEG00000044714) #10	C2orf78 (ENSMNEG00000040886) #11	DUSP11 (ENSMNEG00000043607) #12	TPRKB (ENSMNEG00000036522) #13	ENSMNEG00000042214 ##15	ENSMNEG00000029508	EGR4 (ENSMNEG00000041602) #16	FBXO41 (ENSMNEG00000044980) #18	CCT7 (ENSMNEG00000040196) #17	PRADC1 (ENSMNEG00000043405) #19	SMYD5 (ENSMNEG00000044171) #20	NOTO (ENSMNEG00000034604) #21	RAB11FIP5 (ENSMNEG00000032292) #22	SFXN5 (ENSMNEG00000041349) #23	EMX1 (ENSMNEG00000031712) #24	SPR (ENSMNEG00000031794) #25	EXOC6B (ENSMNEG00000033540) #26	ENSMNEG00000021497	CYP26B1 (ENSMNEG00000037957) #27	ENSMNEG00000008309	ENSMNEG00000041639	DYSF (ENSMNEG00000039503) #28	ZNF638 (ENSMNEG00000028987) #29	PAIP2B (ENSMNEG00000028146) #30	MPHOSPH10 (ENSMNEG00000043591)	ENSMNEG00000043964	NAGK (ENSMNEG00000001946) #31	TEX261 (ENSMNEG00000003947)
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832.r.b #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.a.a.a.a.d.a.b.a	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000013558.n	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a.g	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413
Crab-eating macaque	MODERN SPECIES	4	ENSMFAG00000057899	DUSP11 (ENSMFAG00000035803) #12	TPRKB (ENSMFAG00000043761) #13	ENSMFAG00000052664 #14	ENSMFAG00000063588 #15	ENSMFAG00000054883	ENSMFAG00000038592 #15	ENSMFAG00000055983	EGR4 (ENSMFAG00000051388) #16	FBXO41 (ENSMFAG00000042911) #18	CCT7 (ENSMFAG00000039286) #17	PRADC1 (ENSMFAG00000043171) #19	SMYD5 (ENSMFAG00000000968) #20	NOTO (ENSMFAG00000054075) #21	ENSMFAG00000050657	RAB11FIP5 (ENSMFAG00000026056) #22	SFXN5 (ENSMFAG00000000876) #23	ENSMFAG00000003754	SPR (ENSMFAG00000041573) #25	ENSMFAG00000001840	EXOC6B (ENSMFAG00000032926) #26	CYP26B1 (ENSMFAG00000039784) #27	DYSF (ENSMFAG00000032232) #28	ENSMFAG00000018634	ZNF638 (ENSMFAG00000034359) #29	PAIP2B (ENSMFAG00000027132) #30	MPHOSPH10 (ENSMFAG00000039444)	ENSMFAG00000038402	NAGK (ENSMFAG00000043524) #31	TEX261 (ENSMFAG00000041883)	ANKRD53 (ENSMFAG00000031224)
Rhesus	MODERN SPECIES	4	ACTG2 (ENSMMUG00000017683) #9	STAMBP (ENSMMUG00000010864) #10	C13H2orf78 (ENSMMUG00000010863) #11	DUSP11 (ENSMMUG00000021537) #12	TPRKB (ENSMMUG00000030805) #13	ENSMMUG00000048536 #14	ALMS1 (ENSMMUG00000002819) #15	ENSMMUG00000052447	EGR4 (ENSMMUG00000061319) #16	FBXO41 (ENSMMUG00000047722) #18	CCT7 (ENSMMUG00000012448) #17	PRADC1 (ENSMMUG00000063492) #19	SMYD5 (ENSMMUG00000012445) #20	NOTO (ENSMMUG00000041984) #21	ENSMMUG00000051301	RAB11FIP5 (ENSMMUG00000002301) #22	SFXN5 (ENSMMUG00000002300) #23	EMX1 (ENSMMUG00000057034) #24	SPR (ENSMMUG00000009485) #25	ENSMMUG00000050077	EXOC6B (ENSMMUG00000046512) #26	CYP26B1 (ENSMMUG00000012141) #27	DYSF (ENSMMUG00000007176) #28	ZNF638 (ENSMMUG00000007175) #29	PAIP2B (ENSMMUG00000006330) #30	MPHOSPH10 (ENSMMUG00000008397)	ENSMMUG00000008396	NAGK (ENSMMUG00000002096) #31	TEX261 (ENSMMUG00000002093)	ANKRD53 (ENSMMUG00000055845)	ATP6V1B1 (ENSMMUG00000002090)
Cercopithecinae_b	ANCESTRAL SPECIES	15	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832.r.b #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT00910000147403	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000013558.n	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00390000003248.b.f	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a.g	ENSGT00510000047418 #31	ENSGT00390000010888
Olive baboon	MODERN SPECIES	5	DGUOK (ENSPANG00000006183) #8	ACTG2 (ENSPANG00000008205) #9	STAMBP (ENSPANG00000017543) #10	C2orf78 (ENSPANG00000022011) #11	TPRKB (ENSPANG00000030686) #13	ENSPANG00000038360 #14	ALMS1 (ENSPANG00000014233) #15	ENSPANG00000041355	EGR4 (ENSPANG00000017488) #16	FBXO41 (ENSPANG00000004970) #18	CCT7 (ENSPANG00000021594) #17	PRADC1 (ENSPANG00000010036) #19	SMYD5 (ENSPANG00000008239) #20	NOTO (ENSPANG00000038929) #21	ENSPANG00000029385	RAB11FIP5 (ENSPANG00000025001) #22	EMX1 (ENSPANG00000021694) #24	SPR (ENSPANG00000040672) #25	ENSPANG00000038697	EXOC6B (ENSPANG00000006923) #26	CYP26B1 (ENSPANG00000007513) #27	ENSPANG00000042949	ENSPANG00000045392	DYSF (ENSPANG00000001068) #28	ZNF638 (ENSPANG00000016789) #29	PAIP2B (ENSPANG00000030889) #30	MPHOSPH10 (ENSPANG00000020408)	ENSPANG00000029235	NAGK (ENSPANG00000006889) #31	TEX261 (ENSPANG00000021726)	ANKRD53 (ENSPANG00000021641)
Cercopithecinae_d	ANCESTRAL SPECIES	32	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00390000017606.a.a.i.b.a.a.e.c.b	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832.r.b #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT00910000147403	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000013558.n	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00950000182857.a.a.b.a.r.a.b.b.a.b.d.b	ENSGT00390000003248.b.f	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a.g	ENSGT00510000047418 #31
Sooty mangabey	MODERN SPECIES	494					DUSP11 (ENSCATG00000039066) #12	TPRKB (ENSCATG00000038145) #13	ENSCATG00000018308	ENSCATG00000037583	ALMS1 (ENSCATG00000042992) #15	EGR4 (ENSCATG00000041090) #16	FBXO41 (ENSCATG00000045372) #18	ENSCATG00000041777 #17	PRADC1 (ENSCATG00000029853) #19	SMYD5 (ENSCATG00000041216) #20	NOTO (ENSCATG00000023664) #21	RAB11FIP5 (ENSCATG00000008095) #22	SFXN5 (ENSCATG00000034111) #23	EMX1 (ENSCATG00000031824) #24	SPR (ENSCATG00000040755) #25	ENSCATG00000038635	ENSCATG00000028328	EXOC6B (ENSCATG00000033450) #26	CYP26B1 (ENSCATG00000034632) #27	ENSCATG00000015118	ENSCATG00000015448	DYSF (ENSCATG00000007511) #28	ZNF638 (ENSCATG00000032207) #29	PAIP2B (ENSCATG00000033205) #30	MPHOSPH10 (ENSCATG00000034155)	ENSCATG00000033210	NAGK (ENSCATG00000040675) #31
Drill	MODERN SPECIES	796	DGUOK (ENSMLEG00000031515) #8	ACTG2 (ENSMLEG00000042164) #9	STAMBP (ENSMLEG00000037056) #10	C2orf78 (ENSMLEG00000043810) #11	DUSP11 (ENSMLEG00000039657) #12	TPRKB (ENSMLEG00000037340) #13	ENSMLEG00000030469	ALMS1 (ENSMLEG00000031288) #15	EGR4 (ENSMLEG00000025207) #16	FBXO41 (ENSMLEG00000038426) #18	CCT7 (ENSMLEG00000020457) #17	PRADC1 (ENSMLEG00000040457) #19	SMYD5 (ENSMLEG00000033572) #20	NOTO (ENSMLEG00000032880) #21	ENSMLEG00000032711	RAB11FIP5 (ENSMLEG00000030423) #22	SFXN5 (ENSMLEG00000044055) #23	SPR (ENSMLEG00000029513) #25	ENSMLEG00000008015	EXOC6B (ENSMLEG00000039745) #26	CYP26B1 (ENSMLEG00000034445) #27	ENSMLEG00000020137	ENSMLEG00000025390	DYSF (ENSMLEG00000001121) #28	ZNF638 (ENSMLEG00000037705) #29	PAIP2B (ENSMLEG00000044277) #30	MPHOSPH10 (ENSMLEG00000031602)	ENSMLEG00000026278	NAGK (ENSMLEG00000037999) #31	TEX261 (ENSMLEG00000037228)	ANKRD53 (ENSMLEG00000042301)
Vervet Monkey	MODERN SPECIES	5	DGUOK (ENSCSAG00000015509) #8	ACTG2 (ENSCSAG00000015505) #9	STAMBP (ENSCSAG00000015498) #10	C2orf78 (ENSCSAG00000015495) #11	DUSP11 (ENSCSAG00000015490) #12	TPRKB (ENSCSAG00000015483) #13	ENSCSAG00000019439 #14	ALMS1 (ENSCSAG00000015478) #15	ENSCSAG00000015462	EGR4 (ENSCSAG00000015449) #16	FBXO41 (ENSCSAG00000015442) #18	CCT7 (ENSCSAG00000015413) #17	ENSCSAG00000015374 #19	SMYD5 (ENSCSAG00000015370) #20	NOTO (ENSCSAG00000015364) #21	ENSCSAG00000015359 #22	SFXN5 (ENSCSAG00000015340) #23	EMX1 (ENSCSAG00000015316) #24	SPR (ENSCSAG00000015312) #25	EXOC6B (ENSCSAG00000015307) #26	CYP26B1 (ENSCSAG00000015298) #27	DYSF (ENSCSAG00000015285) #28	ZNF638 (ENSCSAG00000015261) #29	PAIP2B (ENSCSAG00000015251) #30	MPHOSPH10 (ENSCSAG00000015247)	MCEE (ENSCSAG00000015239)	NAGK (ENSCSAG00000015234) #31	TEX261 (ENSCSAG00000015229)	ANKRD53 (ENSCSAG00000015223)	ATP6V1B1 (ENSCSAG00000015215)	VAX2 (ENSCSAG00000015202)
Rhinopithecus	ANCESTRAL SPECIES	69					ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00910000147533	ENSGT00550000074832.r.b #17	ENSGT00390000009837.a.a #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00910000147403	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00910000148799	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00390000003248.b.f	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a.g	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650
Golden snub-nosed monkey	MODERN SPECIES	999					DUSP11 (ENSRROG00000016041) #12	TPRKB (ENSRROG00000036023) #13	ALMS1 (ENSRROG00000027374) #15	EGR4 (ENSRROG00000029452) #16	ENSRROG00000041441	FBXO41 (ENSRROG00000042428) #18	CCT7 (ENSRROG00000031363) #17	PRADC1 (ENSRROG00000035723) #19	SMYD5 (ENSRROG00000033940) #20	NOTO (ENSRROG00000033350) #21	ENSRROG00000044838	RAB11FIP5 (ENSRROG00000032067) #22	ENSRROG00000038179	SFXN5 (ENSRROG00000032816) #23	EMX1 (ENSRROG00000038528) #24	ENSRROG00000040482	SPR (ENSRROG00000032259) #25	EXOC6B (ENSRROG00000033874) #26	CYP26B1 (ENSRROG00000040831) #27	ENSRROG00000020035	DYSF (ENSRROG00000044878) #28	ZNF638 (ENSRROG00000045431) #29	PAIP2B (ENSRROG00000029773) #30	MPHOSPH10 (ENSRROG00000034061)	ENSRROG00000019685	NAGK (ENSRROG00000045580) #31	TEX261 (ENSRROG00000030003)
Black snub-nosed monkey	MODERN SPECIES	72						DUSP11 (ENSRBIG00000037962) #12	TPRKB (ENSRBIG00000019356) #13	ALMS1 (ENSRBIG00000032961) #15	EGR4 (ENSRBIG00000044205) #16	FBXO41 (ENSRBIG00000041422) #18	ENSRBIG00000041433	CCT7 (ENSRBIG00000038914) #17	PRADC1 (ENSRBIG00000039300) #19	SMYD5 (ENSRBIG00000039103) #20	NOTO (ENSRBIG00000025760) #21	RAB11FIP5 (ENSRBIG00000005040) #22	SFXN5 (ENSRBIG00000031888) #23	EMX1 (ENSRBIG00000033682) #24	SPR (ENSRBIG00000027986) #25	EXOC6B (ENSRBIG00000039253) #26	CYP26B1 (ENSRBIG00000043185) #27
Platyrrhini	ANCESTRAL SPECIES	13	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT00910000147403	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359	ENSGT00940000153941.a.a	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413
Cebidae	ANCESTRAL SPECIES	15	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208.s #11	ENSGT00940000155847 #12	ENSGT00390000012942.l #13	ENSGT00390000012942.k.a.a.a #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT00910000147403	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359.f	ENSGT00940000153941.a.a	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413
Cebidae_a	ANCESTRAL SPECIES	30	ENSGT00390000013048	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208.s #11	ENSGT00940000155847 #12	ENSGT00390000012942.l #13	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT00910000147403	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00390000011359.f	ENSGT00940000153941.a.a	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413
Bolivian squirrel monkey	DUPLICATION
Bolivian squirrel monkey	MODERN SPECIES	48	STAMBP (ENSSBOG00000033392) #10	ENSSBOG00000021444	ENSSBOG00000033730	C2orf78 (ENSSBOG00000028427) #11	DUSP11 (ENSSBOG00000032096) #12	ENSSBOG00000030645 #13	ENSSBOG00000026761 #13	ALMS1 (ENSSBOG00000035813) #15	EGR4 (ENSSBOG00000027561) #16	FBXO41 (ENSSBOG00000031597) #18	CCT7 (ENSSBOG00000027045) #17	PRADC1 (ENSSBOG00000032609) #19	SMYD5 (ENSSBOG00000021682) #20	NOTO (ENSSBOG00000026637) #21	ENSSBOG00000010276	ENSSBOG00000025116 #22	ENSSBOG00000023663	SFXN5 (ENSSBOG00000030638) #23	ENSSBOG00000034639	SPR (ENSSBOG00000025250) #25	EXOC6B (ENSSBOG00000033977) #26	CYP26B1 (ENSSBOG00000035317) #27	DYSF (ENSSBOG00000027510) #28	ZNF638 (ENSSBOG00000029960) #29	ENSSBOG00000033804	PAIP2B (ENSSBOG00000026065) #30	ENSSBOG00000022102	MCEE (ENSSBOG00000033189)	NAGK (ENSSBOG00000034842) #31	TEX261 (ENSSBOG00000031616)	ANKRD53 (ENSSBOG00000036175)
Bolivian squirrel monkey	MODERN SPECIES	71	CGGBP1 (ENSSBOG00000016247)	ZNF654 (ENSSBOG00000018458)	C3orf38 (ENSSBOG00000031553)	EPHA3 (ENSSBOG00000035210)	PROS1 (ENSSBOG00000034702)	ARL13B (ENSSBOG00000028083)	NSUN3 (ENSSBOG00000029999)	ENSSBOG00000031875	ENSSBOG00000017639	ENSSBOG00000019683	EPHA6 (ENSSBOG00000028512)	ARL6 (ENSSBOG00000031045)	CRYBG3 (ENSSBOG00000023182)	RIOX2 (ENSSBOG00000035025)	GABRR3 (ENSSBOG00000034776)	ENSSBOG00000022258 #22	ENSSBOG00000014685	ENSSBOG00000024216	POLR3K (ENSSBOG00000013108)	SNRNP25 (ENSSBOG00000027397)	RHBDF1 (ENSSBOG00000031357)	MPG (ENSSBOG00000031429)	NPRL3 (ENSSBOG00000035460)	HBZ (ENSSBOG00000022580)	HBM (ENSSBOG00000030367)	ENSSBOG00000025868	LUC7L (ENSSBOG00000019983)	ENSSBOG00000020237	FAM234A (ENSSBOG00000034126)	RGS11 (ENSSBOG00000024523)	ARHGDIG (ENSSBOG00000018019)
Capuchin	MODERN SPECIES	23						ENSCCAG00000036541 #13	DUSP11 (ENSCCAG00000019956) #12	ENSCCAG00000036333 #13	ALMS1 (ENSCCAG00000034634) #15	EGR4 (ENSCCAG00000037704) #16	FBXO41 (ENSCCAG00000033266) #18	ENSCCAG00000027148	PRADC1 (ENSCCAG00000028676) #19	SMYD5 (ENSCCAG00000032948) #20	NOTO (ENSCCAG00000029209) #21	RAB11FIP5 (ENSCCAG00000025378) #22	SFXN5 (ENSCCAG00000036686) #23	EMX1 (ENSCCAG00000035193) #24	SPR (ENSCCAG00000028340) #25	EXOC6B (ENSCCAG00000030488) #26	CYP26B1 (ENSCCAG00000032938) #27	DYSF (ENSCCAG00000021995) #28	ZNF638 (ENSCCAG00000028170) #29	PAIP2B (ENSCCAG00000000020) #30	ENSCCAG00000032514	ENSCCAG00000037954	MCEE (ENSCCAG00000022477)	NAGK (ENSCCAG00000033331) #31	TEX261 (ENSCCAG00000026931)	ANKRD53 (ENSCCAG00000022187)	ATP6V1B1 (ENSCCAG00000028478)
Marmoset	MODERN SPECIES	5	ENSCJAG00000085191 #11	ENSCJAG00000070391 #11	ENSCJAG00000078195	ENSCJAG00000084972	DUSP11 (ENSCJAG00000038705) #12	ENSCJAG00000004162 #13	ENSCJAG00000072474 #13	ENSCJAG00000043277 #14	ALMS1 (ENSCJAG00000004144) #15	EGR4 (ENSCJAG00000052100) #16	FBXO41 (ENSCJAG00000004115) #18	CCT7 (ENSCJAG00000003978) #17	PRADC1 (ENSCJAG00000003970) #19	SMYD5 (ENSCJAG00000003966) #20	NOTO (ENSCJAG00000043188) #21	RAB11FIP5 (ENSCJAG00000003950) #22	SFXN5 (ENSCJAG00000003886) #23	EMX1 (ENSCJAG00000039703) #24	SPR (ENSCJAG00000073980) #25	EXOC6B (ENSCJAG00000003846) #26	CYP26B1 (ENSCJAG00000072683) #27	ENSCJAG00000074990	DYSF (ENSCJAG00000003605) #28	ENSCJAG00000082822	ENSCJAG00000075497	ENSCJAG00000011364 #14	STAMBP (ENSCJAG00000017897) #10	ACTG2 (ENSCJAG00000017882) #9	DGUOK (ENSCJAG00000017868) #8	TET3 (ENSCJAG00000017853) #7	ENSCJAG00000017844
Mas night monkey	MODERN SPECIES	498									EGR4 (ENSANAG00000030720) #16	FBXO41 (ENSANAG00000023150) #18	CCT7 (ENSANAG00000021472) #17	PRADC1 (ENSANAG00000029693) #19	SMYD5 (ENSANAG00000034878) #20	NOTO (ENSANAG00000029289) #21	ENSANAG00000023962	RAB11FIP5 (ENSANAG00000021273) #22	SFXN5 (ENSANAG00000028731) #23	EMX1 (ENSANAG00000024149) #24	SPR (ENSANAG00000023077) #25	EXOC6B (ENSANAG00000032385) #26	CYP26B1 (ENSANAG00000019618) #27	DYSF (ENSANAG00000025117) #28	ENSANAG00000002807	ZNF638 (ENSANAG00000027400) #29	TPRKB (ENSANAG00000026124) #13	PAIP2B (ENSANAG00000034035) #30	MPHOSPH10 (ENSANAG00000025905)	MCEE (ENSANAG00000030635)	NAGK (ENSANAG00000029222) #31	TEX261 (ENSANAG00000031586)	ANKRD53 (ENSANAG00000002448)
Tarsier	MODERN SPECIES	2934															ENSTSYG00000029868	RAB11FIP5 (ENSTSYG00000026075) #22	SFXN5 (ENSTSYG00000008081) #23	SPR (ENSTSYG00000028379) #25
Strepsirrhini	ANCESTRAL SPECIES	13	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.i #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT00440000033552
Lemuriformes	ANCESTRAL SPECIES	19	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942.i #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT00440000033552
Lemuriformes_a	ANCESTRAL SPECIES	52										ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT00440000033552
Coquerels sifaka	MODERN SPECIES	350								ENSPCOG00000024220 #13	ENSPCOG00000025184 ##15	EGR4 (ENSPCOG00000028054) #16	FBXO41 (ENSPCOG00000021708) #18	ENSPCOG00000023685 #17	PRADC1 (ENSPCOG00000013031) #19	SMYD5 (ENSPCOG00000027194) #20	NOTO (ENSPCOG00000022940) #21	RAB11FIP5 (ENSPCOG00000021663) #22	SFXN5 (ENSPCOG00000025873) #23	EMX1 (ENSPCOG00000021905) #24	SPR (ENSPCOG00000007624) #25	EXOC6B (ENSPCOG00000014201) #26	CYP26B1 (ENSPCOG00000014259) #27	DYSF (ENSPCOG00000023137) #28	ZNF638 (ENSPCOG00000015676) #29	PAIP2B (ENSPCOG00000014555) #30	NAGK (ENSPCOG00000016475) #31	TEX261 (ENSPCOG00000014930)	ANKRD53 (ENSPCOG00000015426)	ATP6V1B1 (ENSPCOG00000017795)	VAX2 (ENSPCOG00000027713)	CD207 (ENSPCOG00000008642)	FIGLA (ENSPCOG00000020922)
Greater bamboo lemur	MODERN SPECIES	114					TPRKB (ENSPSMG00000018746) #13	ENSPSMG00000018749	ENSPSMG00000018752 #14	ENSPSMG00000018754 ##15	EGR4 (ENSPSMG00000018764) #16	FBXO41 (ENSPSMG00000018787) #18	ENSPSMG00000018797	CCT7 (ENSPSMG00000018896) #17	PRADC1 (ENSPSMG00000018980) #19	SMYD5 (ENSPSMG00000018998) #20	NOTO (ENSPSMG00000019003) #21	RAB11FIP5 (ENSPSMG00000019034) #22	SFXN5 (ENSPSMG00000019079) #23	EMX1 (ENSPSMG00000019089) #24	SPR (ENSPSMG00000019095) #25	ENSPSMG00000019101	EXOC6B (ENSPSMG00000019184) #26	ENSPSMG00000019315	CYP26B1 (ENSPSMG00000019340) #27	DYSF (ENSPSMG00000020356) #28	ZNF638 (ENSPSMG00000020849) #29	ENSPSMG00000020863	PAIP2B (ENSPSMG00000020867) #30	NAGK (ENSPSMG00000020912) #31	TEX261 (ENSPSMG00000020922)	ENSPSMG00000020925	ANKRD53 (ENSPSMG00000020949)
Mouse lemur	MODERN SPECIES	26	BOLA3 (ENSMICG00000028730)	TET3 (ENSMICG00000011291) #7	DGUOK (ENSMICG00000006034) #8	ACTG2 (ENSMICG00000006029) #9	STAMBP (ENSMICG00000014755) #10	C2orf78 (ENSMICG00000044504) #11	DUSP11 (ENSMICG00000045101) #12	TPRKB (ENSMICG00000044266) #13	ALMS1 (ENSMICG00000015556) #15	EGR4 (ENSMICG00000032274) #16	FBXO41 (ENSMICG00000015538) #18	ENSMICG00000015499 #17	PRADC1 (ENSMICG00000015486) #19	SMYD5 (ENSMICG00000015464) #20	NOTO (ENSMICG00000031204) #21	RAB11FIP5 (ENSMICG00000028189) #22	SFXN5 (ENSMICG00000011287) #23	EMX1 (ENSMICG00000032816) #24	SPR (ENSMICG00000032624) #25	ENSMICG00000011277	EXOC6B (ENSMICG00000011255) #26	CYP26B1 (ENSMICG00000016464) #27	DYSF (ENSMICG00000010232) #28	ZNF638 (ENSMICG00000005419) #29	PAIP2B (ENSMICG00000030507) #30	NAGK (ENSMICG00000007070) #31	TEX261 (ENSMICG00000031861)	ANKRD53 (ENSMICG00000007049)	ATP6V1B1 (ENSMICG00000005270)	VAX2 (ENSMICG00000046942)	CD207 (ENSMICG00000000713)
Bushbaby	MODERN SPECIES	183	ACTG2 (ENSOGAG00000006438) #9	STAMBP (ENSOGAG00000006062) #10	C2orf78 (ENSOGAG00000029274) #11	ENSOGAG00000027917	DUSP11 (ENSOGAG00000005999) #12	TPRKB (ENSOGAG00000032893) #13	ENSOGAG00000007732 #14	ENSOGAG00000027847	ALMS1 (ENSOGAG00000005978) #15	EGR4 (ENSOGAG00000030923) #16	FBXO41 (ENSOGAG00000009166) #18	CCT7 (ENSOGAG00000009162) #17	PRADC1 (ENSOGAG00000009159) #19	SMYD5 (ENSOGAG00000009153) #20	NOTO (ENSOGAG00000034740) #21	RAB11FIP5 (ENSOGAG00000009150) #22	SFXN5 (ENSOGAG00000009144) #23	EMX1 (ENSOGAG00000032418) #24	SPR (ENSOGAG00000012959) #25	EXOC6B (ENSOGAG00000012954) #26	CYP26B1 (ENSOGAG00000005819) #27	ENSOGAG00000027232	DYSF (ENSOGAG00000001155) #28	ZNF638 (ENSOGAG00000001152) #29	PAIP2B (ENSOGAG00000029745) #30	NAGK (ENSOGAG00000034374) #31	TEX261 (ENSOGAG00000015331)	ANKRD53 (ENSOGAG00000015328)	ATP6V1B1 (ENSOGAG00000015321)	VAX2 (ENSOGAG00000015318)	CD207 (ENSOGAG00000000726)
Atlantogenata	ANCESTRAL SPECIES	43	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Xenarthra	ANCESTRAL SPECIES	484												ENSGT00940000162199 #16	ENSGT00550000074832 #17	ENSGT00530000063713.b.a #18	ENSGT00510000047420 #20	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27
Armadillo	MODERN SPECIES	2246												EGR4 (ENSDNOG00000047413) #16	FBXO41 (ENSDNOG00000009100) #18	CCT7 (ENSDNOG00000009084) #17	SMYD5 (ENSDNOG00000043321) #20	ENSDNOG00000037773 #22	SFXN5 (ENSDNOG00000017652) #23	EMX1 (ENSDNOG00000048933) #24	SPR (ENSDNOG00000010699) #25	ENSDNOG00000038217 #26	ENSDNOG00000040895 #26	CYP26B1 (ENSDNOG00000044570) #27
Afrotheria	ANCESTRAL SPECIES	46	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B.d #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Tenrec	MODERN SPECIES	3970																ENSETEG00000014108 #22	ENSETEG00000014105 #23
Afrotheria_a	ANCESTRAL SPECIES	45	ENSGT00940000157631 #7	ENSGT00940000159627 #8	ENSGT00940000154148.a.b #9	ENSGT00940000153710.a #10	ENSGT00390000014208 #11	ENSGT00940000155847 #12	ENSGT00390000012942 #13	ENSGT00950000182932.A.a #14	ENSGT00940000153123.B.d #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT00940000161863	ENSGT01030000234575.d.c
Hyrax	MODERN SPECIES	2554																RAB11FIP5 (ENSPCAG00000015796) #22	SFXN5 (ENSPCAG00000015701) #23	EMX1 (ENSPCAG00000015677) #24
Elephant	MODERN SPECIES	278	ACTG2 (ENSLAFG00000012628) #9	STAMBP (ENSLAFG00000014459) #10	C2orf78 (ENSLAFG00000021801) #11	DUSP11 (ENSLAFG00000001637) #12	TPRKB (ENSLAFG00000011965) #13	ENSLAFG00000010449 #14	ENSLAFG00000010447 #14	ENSLAFG00000027463 #14	ALMS1 (ENSLAFG00000010438) #15	EGR4 (ENSLAFG00000008635) #16	FBXO41 (ENSLAFG00000023198) #18	CCT7 (ENSLAFG00000003995) #17	PRADC1 (ENSLAFG00000009800) #19	SMYD5 (ENSLAFG00000009438) #20	NOTO (ENSLAFG00000025649) #21	RAB11FIP5 (ENSLAFG00000031092) #22	SFXN5 (ENSLAFG00000016927) #23	EMX1 (ENSLAFG00000007063) #24	SPR (ENSLAFG00000007059) #25	ENSLAFG00000028784	EXOC6B (ENSLAFG00000018118) #26	ENSLAFG00000025551 #26	CYP26B1 (ENSLAFG00000012208) #27	DYSF (ENSLAFG00000016001) #28	ZNF638 (ENSLAFG00000008513) #29	PAIP2B (ENSLAFG00000007696) #30	NAGK (ENSLAFG00000012745) #31	TEX261 (ENSLAFG00000012734)	ANKRD53 (ENSLAFG00000012729)	ATP6V1B1 (ENSLAFG00000005643)	VAX2 (ENSLAFG00000005639)
Marsupialia	ANCESTRAL SPECIES	26	ENSGT00950000182932.A.a.b #14	ENSGT01030000234575.d.c	ENSGT00940000154447.a.b.b	ENSGT00940000154447.a.a	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.a.a #14	ENSGT00950000182932.A.a.a.b #14	ENSGT00940000161863.a.b.b.a	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609.i #25	ENSGT00440000033609.j #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT01100000263475.e.f.a
Marsupialia_b	ANCESTRAL SPECIES	23	ENSGT00940000154447.a.b.a.b	ENSGT00940000154447.a.a	ENSGT01030000234575.d.c.d	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.a.a #14	ENSGT00950000182932.A.a.a.b #14	ENSGT00940000161863.a.b.b.a	ENSGT00940000161863.a.b.a	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609.i #25	ENSGT00440000033609.j #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT01100000263475.e.f.a
Diprotodontia	ANCESTRAL SPECIES	35	ENSGT01030000234575.d.c.c	ENSGT00940000154447.a.b.b	ENSGT00940000154447.a.b.a.b	ENSGT00940000154447.a.a	ENSGT01030000234575.d.c.d	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.a.a #14	ENSGT00950000182932.A.a.a.b #14	ENSGT00940000161863.a.b.a	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609.i #25	ENSGT00440000033609.j #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00980000198740	ENSGT00940000161413	ENSGT00940000161043
Wallaby	MODERN SPECIES	4154																RAB11FIP5 (ENSMEUG00000015725) #22
Diprotodontia_a	ANCESTRAL SPECIES	34	ENSGT01030000234575.d.c.c	ENSGT00940000154447.a.b.b	ENSGT00940000154447.a.b.a.b	ENSGT00940000154447.a.a	ENSGT01030000234575.d.c.d	ENSGT00390000012942 #13	ENSGT00950000182932.A.a.a.a #14	ENSGT00950000182932.A.a.a.b #14	ENSGT00940000161863.a.b.a	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609.i #25	ENSGT00440000033609.j #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00980000198740	ENSGT00940000161413	ENSGT00940000161043
koala	MODERN SPECIES	88	ENSPCIG00000031966	ENSPCIG00000001932	ENSPCIG00000029499	TPRKB (ENSPCIG00000029497) #13	ENSPCIG00000029495 #14	ENSPCIG00000029494 #14	ENSPCIG00000032980	ENSPCIG00000029485	EGR4 (ENSPCIG00000031435) #16	FBXO41 (ENSPCIG00000029473) #18	CCT7 (ENSPCIG00000029472) #17	PRADC1 (ENSPCIG00000029471) #19	SMYD5 (ENSPCIG00000029470) #20	ENSPCIG00000029469 #21	ENSPCIG00000029468	ENSPCIG00000029467 #22	SFXN5 (ENSPCIG00000036509) #23	EMX1 (ENSPCIG00000029464) #24	ENSPCIG00000029463 #25	ENSPCIG00000031837 #25	EXOC6B (ENSPCIG00000029460) #26	CYP26B1 (ENSPCIG00000017628) #27	DYSF (ENSPCIG00000013799) #28	ZNF638 (ENSPCIG00000013410) #29	ENSPCIG00000015895 #30	NAGK (ENSPCIG00000015892) #31	TEX261 (ENSPCIG00000015890)	ENSPCIG00000015888	ENSPCIG00000015886	ATP6V1B1 (ENSPCIG00000015885)	VAX2 (ENSPCIG00000015884)
Common wonbat	MODERN SPECIES	1069	ENSVURG00010000769	ENSVURG00010000758	ENSVURG00010000745	ENSVURG00010000739	ENSVURG00010000714	TPRKB (ENSVURG00010000698) #13	ENSVURG00010000689 #14	ENSVURG00010000666 #14	ENSVURG00010000631	ENSVURG00010000624	EGR4 (ENSVURG00010000602) #16	FBXO41 (ENSVURG00010000551) #18	CCT7 (ENSVURG00010000401) #17	PRADC1 (ENSVURG00010000367) #19	SMYD5 (ENSVURG00010000302) #20	ENSVURG00010000284 #22	SFXN5 (ENSVURG00010000246) #23	EMX1 (ENSVURG00010000209) #24	SPR (ENSVURG00010000201) #25	EXOC6B (ENSVURG00010000156) #26	CYP26B1 (ENSVURG00010020891) #27	DYSF (ENSVURG00010020833) #28	ZNF638 (ENSVURG00010020801) #29	PAIP2B (ENSVURG00010020793) #30	NAGK (ENSVURG00010020789) #31	TEX261 (ENSVURG00010020786)	ENSVURG00010020781	ENSVURG00010020774	ATP6V1B1 (ENSVURG00010020220)	VAX2 (ENSVURG00010020169)	ENSVURG00010020162
Platypus	MODERN SPECIES	9	ENSOANG00000012295	ENSOANG00000008657	ENSOANG00000007216	ENSOANG00000045080	ENSOANG00000051276	ATP6V1B1 (ENSOANG00000038037)	ENSOANG00000047351	TEX261 (ENSOANG00000040789)	NAGK (ENSOANG00000050109) #31	PAIP2B (ENSOANG00000039160) #30	ENSOANG00000013007 #29	DYSF (ENSOANG00000013009) #28	CYP26B1 (ENSOANG00000001810) #27	EXOC6B (ENSOANG00000041145) #26	SPR (ENSOANG00000038096) #25	ENSOANG00000049271 #22	SFXN5 (ENSOANG00000021070) #23	EMX1 (ENSOANG00000037932) #24	SMYD5 (ENSOANG00000050059) #20	ENSOANG00000044978 #19	CCT7 (ENSOANG00000041775) #17	FBXO41 (ENSOANG00000048874) #18	NIPA2 (ENSOANG00000036039)	NIPA1 (ENSOANG00000013091)	HERC2 (ENSOANG00000014542)	OCA2 (ENSOANG00000031582)	ENSOANG00000005813	ENSOANG00000030619	GABRA5 (ENSOANG00000009524)	GABRB3 (ENSOANG00000009525)	ENSOANG00000009526
Sauria	ANCESTRAL SPECIES	6	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00940000165596	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000179269	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00510000048167.b.a	ENSGT00940000161413	ENSGT00940000161043	ENSGT00960000189762
Archelosauria	ANCESTRAL SPECIES	4	ENSGT00730000112302	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00940000165596	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00980000198740	ENSGT00940000161413	ENSGT00940000161043	ENSGT00960000189762
Cryptodira	ANCESTRAL SPECIES	2	ENSGT00730000112302	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00940000165596	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT01100000263535.a.a	ENSGT00940000159032
Testudinoidea	ANCESTRAL SPECIES	37	ENSGT00730000112302	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00940000165596	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT01100000263535.a.a	ENSGT00940000159032	ENSGT00390000008711
Emydidae	ANCESTRAL SPECIES	1	ENSGT00730000112302	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00940000165596	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT00940000161043	ENSGT01100000263535.a.a	ENSGT00940000159032	ENSGT00390000008711
Three-toed box turtle	MODERN SPECIES	308							GFRA4 (ENSTMTG00000016272)	ENSTMTG00000016292	ENSTMTG00000016310	EGR4 (ENSTMTG00000016328) #16	FBXO41 (ENSTMTG00000016355) #18	CCT7 (ENSTMTG00000016391) #17	PRADC1 (ENSTMTG00000016422) #19	SMYD5 (ENSTMTG00000016451) #20	ENSTMTG00000016646 #21	RAB11FIP5 (ENSTMTG00000016661) #22	SFXN5 (ENSTMTG00000016689) #23	EMX1 (ENSTMTG00000016714) #24	EXOC6B (ENSTMTG00000016760) #26	CYP26B1 (ENSTMTG00000017389) #27	DYSF (ENSTMTG00000017408) #28	ENSTMTG00000017458 #29	ENSTMTG00000017470 #29	PAIP2B (ENSTMTG00000017480) #30	NAGK (ENSTMTG00000017489) #31	TEX261 (ENSTMTG00000017510)	ENSTMTG00000017536	ENSTMTG00000017658	VAX2 (ENSTMTG00000019236)	SIGLEC1 (ENSTMTG00000019256)	HSPA12B (ENSTMTG00000019318)
painted turtle	MODERN SPECIES	722	ENSCPBG00000024548	SLC4A11 (ENSCPBG00000024543)	ENSCPBG00000024539	DNAAF9 (ENSCPBG00000024533)	ATRN (ENSCPBG00000024528)	GFRA4 (ENSCPBG00000024526)	ADAM33 (ENSCPBG00000024521)	ENSCPBG00000024520 #15	EGR4 (ENSCPBG00000024519) #16	FBXO41 (ENSCPBG00000024517) #18	CCT7 (ENSCPBG00000024515) #17	PRADC1 (ENSCPBG00000024514) #19	SMYD5 (ENSCPBG00000024513) #20	ENSCPBG00000024512 #21	ENSCPBG00000024511 #21	RAB11FIP5 (ENSCPBG00000024510) #22	SFXN5 (ENSCPBG00000024508) #23	EMX1 (ENSCPBG00000024507) #24	ENSCPBG00000024505	EXOC6B (ENSCPBG00000024503) #26	CYP26B1 (ENSCPBG00000024502) #27	DYSF (ENSCPBG00000020149) #28	ZNF638 (ENSCPBG00000019903) #29	PAIP2B (ENSCPBG00000019898) #30	NAGK (ENSCPBG00000019895) #31	TEX261 (ENSCPBG00000019893)	ATP6V1B1 (ENSCPBG00000019887)	VAX2 (ENSCPBG00000019886)	SIGLEC1 (ENSCPBG00000019883)	ENSCPBG00000019882	ADISSP (ENSCPBG00000019875)
Testudinidae	ANCESTRAL SPECIES	31	ENSGT00940000169304	ENSGT00730000112302	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000007636	ENSGT00940000161253	ENSGT00940000162540.b	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154	ENSGT00940000157856
Goode s thornscrub tortoise	MODERN SPECIES	19	ENSGEVG00005020872	ENSGEVG00005020869	SLC4A11 (ENSGEVG00005020858)	DNAAF9 (ENSGEVG00005020841)	ATRN (ENSGEVG00005020826)	GFRA4 (ENSGEVG00005020816)	ADAM33 (ENSGEVG00005020788)	ENSGEVG00005020764 #15	ENSGEVG00005020761 #16	FBXO41 (ENSGEVG00005020758) #18	CCT7 (ENSGEVG00005020754) #17	PRADC1 (ENSGEVG00005020752) #19	SMYD5 (ENSGEVG00005020747) #20	ENSGEVG00005020742 #21	ENSGEVG00005020741 #21	RAB11FIP5 (ENSGEVG00005020732) #22	SFXN5 (ENSGEVG00005020722) #23	EMX1 (ENSGEVG00005020716) #24	ENSGEVG00005020708 #26	ENSGEVG00005020702 #26	CYP26B1 (ENSGEVG00005020698) #27	DYSF (ENSGEVG00005016804) #28	ZNF638 (ENSGEVG00005014419) #29	PAIP2B (ENSGEVG00005014351) #30	NAGK (ENSGEVG00005014320) #31	ENSGEVG00005014275	ENSGEVG00005014198	TEX261 (ENSGEVG00005014128)	ENSGEVG00005013866	VAX2 (ENSGEVG00005013800)	SIGLEC1 (ENSGEVG00005012651)
Abingdon island giant tortoise	MODERN SPECIES	2486								ENSCABG00000020228 ##15	EGR4 (ENSCABG00000020227) #16	FBXO41 (ENSCABG00000020226) #18	CCT7 (ENSCABG00000020224) #17	PRADC1 (ENSCABG00000020223) #19	SMYD5 (ENSCABG00000020221) #20	ENSCABG00000020218 #21	ENSCABG00000020217 #21	RAB11FIP5 (ENSCABG00000020215) #22	SFXN5 (ENSCABG00000020212) #23	EMX1 (ENSCABG00000020211) #24	ENSCABG00000020208 #26
Chinese turtle	MODERN SPECIES	1328																ENSPSIG00000014265 #22	SFXN5 (ENSPSIG00000014036) #23	EMX1 (ENSPSIG00000014030) #24	ENSPSIG00000013998 #25	EXOC6B (ENSPSIG00000013469) #26	CYP26B1 (ENSPSIG00000013313) #27	ENSPSIG00000013303	DYSF (ENSPSIG00000012173) #28	ZNF638 (ENSPSIG00000011267) #29	PAIP2B (ENSPSIG00000011250) #30	NAGK (ENSPSIG00000011022) #31	TEX261 (ENSPSIG00000011018)	ANKRD53 (ENSPSIG00000010797)	ENSPSIG00000010274	ENSPSIG00000010269	ENSPSIG00000001668
Archosauria	ANCESTRAL SPECIES	1	ENSGT00730000112302	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00940000165596	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00980000198740	ENSGT00940000161413	ENSGT00940000161043	ENSGT00960000189762	ENSGT01100000263535.a.a
Aves	ANCESTRAL SPECIES	3	ENSGT00390000017193	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00940000165596	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00980000198740	ENSGT00940000161413	ENSGT00940000161043	ENSGT00960000189762	ENSGT01100000263535.a.a
Neognathae	ANCESTRAL SPECIES	5	ENSGT00390000017193	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00940000165596	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A.ab #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00980000198740	ENSGT00940000161413	ENSGT00940000161043	ENSGT00960000189762.a	ENSGT01100000263535.a.a
Galloanserae	ANCESTRAL SPECIES	5	ENSGT00390000017193	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00940000165596	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A.`b.a #29	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00980000198740	ENSGT00940000161413	ENSGT00940000161043	ENSGT01100000263535.a.a	ENSGT00940000159032	ENSGT00390000008711
Anatidae	ANCESTRAL SPECIES	2	ENSGT00940000154078.b	ENSGT00940000169304	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A.`b.a #29
Duck	DUPLICATION
Duck	MODERN SPECIES	2932																ENSAPLG00000019901 #22
Duck	MODERN SPECIES	22	ENSAPLG00000003359	ENSAPLG00000027783	ENSAPLG00000025526	UBOX5 (ENSAPLG00000004151)	ENSAPLG00000026990	ENSAPLG00000028920	SLC4A11 (ENSAPLG00000004523)	DNAAF9 (ENSAPLG00000004579)	ATRN (ENSAPLG00000004965)	GFRA4 (ENSAPLG00000005430)	ADAM33 (ENSAPLG00000005645)	ENSAPLG00000021920 #15	ENSAPLG00000023116 #16	FBXO41 (ENSAPLG00000014918) #18	ENSAPLG00000021748 #21	ENSAPLG00000018305 #22	ENSAPLG00000027296	SFXN5 (ENSAPLG00000005231) #23	ENSAPLG00000018061 #25	EXOC6B (ENSAPLG00000006898) #26	ZNF638 (ENSAPLG00000019837) #29	DCTD (ENSAPLG00000002602)	ENSAPLG00000016426	ENSAPLG00000016422	ENSAPLG00000031221	AGA (ENSAPLG00000013364)	NEIL3 (ENSAPLG00000013305)	VEGFC (ENSAPLG00000005470)	SPCS3 (ENSAPLG00000005667)	ASB5 (ENSAPLG00000005751)	SPATA4 (ENSAPLG00000006032)
Phasianidae	ANCESTRAL SPECIES	2	ENSGT00390000017193	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00940000165596	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28
Japanese quail	MODERN SPECIES	22	ENSCJPG00005007602	SLC4A11 (ENSCJPG00005007604)	ENSCJPG00005007615	DNAAF9 (ENSCJPG00005007625)	ATRN (ENSCJPG00005007640)	GFRA4 (ENSCJPG00005007641)	ADAM33 (ENSCJPG00005007650)	ENSCJPG00005007741 #15	EGR4 (ENSCJPG00005007745) #16	FBXO41 (ENSCJPG00005007747) #18	CCT7 (ENSCJPG00005007831) #17	PRADC1 (ENSCJPG00005007832) #19	SMYD5 (ENSCJPG00005007833) #20	ENSCJPG00005007887 #21	ENSCJPG00005007890 #21	RAB11FIP5 (ENSCJPG00005007893) #22	SFXN5 (ENSCJPG00005007895) #23	EMX1 (ENSCJPG00005007896) #24	SPR (ENSCJPG00005007898) #25	ENSCJPG00005007903 #26	ENSCJPG00005007915 #26	CYP26B1 (ENSCJPG00005007916) #27	DYSF (ENSCJPG00005007968) #28
Phasianidae_b	ANCESTRAL SPECIES	4	ENSGT00390000017193	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00940000165596	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00390000007636	ENSGT00940000161253	ENSGT00940000153710.a #10	ENSGT00940000154148.a.b #9	ENSGT00940000159627 #8	ENSGT00940000157631 #7	ENSGT00390000013048	ENSGT01050000244898.b.a	ENSGT00940000154863
Turkey	DUPLICATION
Turkey	MODERN SPECIES	24	AQP5 (ENSMGAG00000010678)	ENSMGAG00000016656	SLC4A8 (ENSMGAG00000010683)	GALNT6 (ENSMGAG00000010723)	CELA1 (ENSMGAG00000001752)	BIN2 (ENSMGAG00000001776)	ENSMGAG00000013322 #27	ENSMGAG00000022422 #26	ENSMGAG00000013317 #26	ENSMGAG00000020706 #26	ENSMGAG00000013315 #25	ENSMGAG00000022921	ENSMGAG00000013296 #23	ENSMGAG00000018045	ENSMGAG00000021849 #22	ENSMGAG00000021557 #22	ENSMGAG00000013290 #21	ENSMGAG00000013285 #20	ENSMGAG00000022598 #21	ENSMGAG00000019976 #17	PRADC1 (ENSMGAG00000013283) #19	ENSMGAG00000013313 #17	ENSMGAG00000013308 #16	ENSMGAG00000013309 #18	ENSMGAG00000020261 #15	ENSMGAG00000022938	ENSMGAG00000013267	ENSMGAG00000022530	ENSMGAG00000013263	ENSMGAG00000013246	ENSMGAG00000013244
Turkey	MODERN SPECIES	24	AQP2 (ENSMGAG00000011160)	AQP5 (ENSMGAG00000010678)	ENSMGAG00000016656	SLC4A8 (ENSMGAG00000010683)	GALNT6 (ENSMGAG00000010723)	CELA1 (ENSMGAG00000001752)	BIN2 (ENSMGAG00000001776)	ENSMGAG00000013322 #27	ENSMGAG00000022422 #26	ENSMGAG00000013317 #26	ENSMGAG00000020706 #26	ENSMGAG00000013315 #25	ENSMGAG00000022921	ENSMGAG00000013296 #23	ENSMGAG00000018045	ENSMGAG00000021849 #22	ENSMGAG00000021557 #22	ENSMGAG00000013290 #21	ENSMGAG00000013285 #20	ENSMGAG00000022598 #21	ENSMGAG00000019976 #17	PRADC1 (ENSMGAG00000013283) #19	ENSMGAG00000013313 #17	ENSMGAG00000013308 #16	ENSMGAG00000013309 #18	ENSMGAG00000020261 #15	ENSMGAG00000022938	ENSMGAG00000013267	ENSMGAG00000022530	ENSMGAG00000013263	ENSMGAG00000013246
Chicken	MODERN SPECIES	33	HTR7L (ENSGALG00010017901)	SLC4A11 (ENSGALG00010017983)	ENSGALG00010017995	DNAAF9 (ENSGALG00010018007)	ATRN (ENSGALG00010018021)	GFRA4 (ENSGALG00010018048)	ADAM33 (ENSGALG00010018068)	ENSGALG00010018087 #15	EGR4 (ENSGALG00010018098) #16	FBXO41 (ENSGALG00010018124) #18	CCT7 (ENSGALG00010018163) #17	PRADC1 (ENSGALG00010018179) #19	SMYD5 (ENSGALG00010018231) #20	NOTO (ENSGALG00010018247) #21	GNOT2 (ENSGALG00010018266) #21	RAB11FIP5 (ENSGALG00010018302) #22	SFXN5 (ENSGALG00010018344) #23	EMX1 (ENSGALG00010018362) #24	SPR (ENSGALG00010018385) #25	EXOC6B (ENSGALG00010018410) #26	CYP26B1 (ENSGALG00010018425) #27	DYSF (ENSGALG00010018466) #28	ENSGALG00010018495	ENSGALG00010018500	ENSGALG00010018545	ENSGALG00010018506 #31	ENSGALG00010018521 #29	ENSGALG00010018536	ENSGALG00010015915	EBF4 (ENSGALG00010016322)	ENSGALG00010018538
Neognathae_b	ANCESTRAL SPECIES	4	ENSGT00940000154078.b	ENSGT00390000017193	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000179269	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A.ab #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00980000198740	ENSGT00510000048167.b.a	ENSGT00940000161413	ENSGT00940000161043	ENSGT00960000189762.a
Neognathae_c	ANCESTRAL SPECIES	3	ENSGT00940000154078.b	ENSGT00390000017193	ENSGT01010000222287.B.a.a.b	ENSGT00940000154894	ENSGT00390000003692	ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000179269	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A.ab #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00980000198740	ENSGT00510000048167.b.a	ENSGT00940000161413	ENSGT00940000161043	ENSGT01100000263535.a.a
Golden eagle	MODERN SPECIES		DDRGK1 (ENSACCG00020000044)	ENSACCG00020000043	SLC4A11 (ENSACCG00020000042)	DNAAF9 (ENSACCG00020000041)	ENSACCG00020000040	ATRN (ENSACCG00020000039)	GFRA4 (ENSACCG00020000038)	ADAM33 (ENSACCG00020000037)	ENSACCG00020000036	EGR4 (ENSACCG00020000035) #16	FBXO41 (ENSACCG00020000034) #18	CCT7 (ENSACCG00020000033) #17	PRADC1 (ENSACCG00020000032) #19	SMYD5 (ENSACCG00020000031) #20	ENSACCG00020000030 #21	RAB11FIP5 (ENSACCG00020000029) #22	SFXN5 (ENSACCG00020000028) #23	EMX1 (ENSACCG00020000027) #24	SPR (ENSACCG00020000026) #25	EXOC6B (ENSACCG00020000025) #26	CYP26B1 (ENSACCG00020000024) #27	ENSACCG00020000023	DYSF (ENSACCG00020000022) #28	ZNF638 (ENSACCG00020000021) #29	PAIP2B (ENSACCG00020000020) #30	NAGK (ENSACCG00020000019) #31	TEX261 (ENSACCG00020000018)	ENSACCG00020000017	ATP6V1B1 (ENSACCG00020000016)	ENSACCG00020000015	VAX2 (ENSACCG00020000014)
Kakapo	MODERN SPECIES	24	DDRGK1 (ENSSHBG00005020356)	ENSSHBG00005020351	SLC4A11 (ENSSHBG00005020277)	DNAAF9 (ENSSHBG00005020232)	ATRN (ENSSHBG00005020216)	GFRA4 (ENSSHBG00005020203)	ADAM33 (ENSSHBG00005020182)	ENSSHBG00005020173	EGR4 (ENSSHBG00005020171) #16	FBXO41 (ENSSHBG00005020167) #18	CCT7 (ENSSHBG00005020163) #17	PRADC1 (ENSSHBG00005020157) #19	SMYD5 (ENSSHBG00005020154) #20	ENSSHBG00005020152 #21	ENSSHBG00005020150 #21	RAB11FIP5 (ENSSHBG00005020146) #22	SFXN5 (ENSSHBG00005020144) #23	EMX1 (ENSSHBG00005020138) #24	SPR (ENSSHBG00005020134) #25	EXOC6B (ENSSHBG00005020116) #26	CYP26B1 (ENSSHBG00005020098) #27	DYSF (ENSSHBG00005013952) #28	ZNF638 (ENSSHBG00005012138) #29	PAIP2B (ENSSHBG00005012094) #30	NAGK (ENSSHBG00005012077) #31	TEX261 (ENSSHBG00005012047)	ENSSHBG00005012016	ENSSHBG00005011990	VAX2 (ENSSHBG00005011973)	SIGLEC1 (ENSSHBG00005011760)	HSPA12B (ENSSHBG00005011630)
Passeriformes	DUPLICATION
Passeriformes	DUPLICATION
Passeriformes	ANCESTRAL SPECIES	4						ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000162199 #16	ENSGT00530000063713.b.a.h #18	ENSGT00530000063713.b.a.g #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783.i.a #22	ENSGT00940000158783.j #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00950000182859.A.a.a.a	ENSGT00910000144159.A.a	ENSGT00390000008711	ENSGT00940000159032	ENSGT01100000263535.a.a	ENSGT00960000189762.a	ENSGT00940000161043	ENSGT00940000161413
Great tit	MODERN SPECIES	295													CCT7 (ENSPMJG00000004156) #17	PRADC1 (ENSPMJG00000004153) #19	SMYD5 (ENSPMJG00000004150) #20	RAB11FIP5 (ENSPMJG00000004142) #22
Passeriformes_d	ANCESTRAL SPECIES	4						ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000162199 #16	ENSGT00530000063713.b.a.h #18	ENSGT00530000063713.b.a.g #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783.i.a #22	ENSGT00940000158783.j #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00950000182859.A.a.a.a	ENSGT00910000144159.A.a	ENSGT00390000008711	ENSGT00940000159032	ENSGT01100000263535.a.a	ENSGT00940000161043	ENSGT00940000161413	ENSGT00390000010888
Passeriformes_g	ANCESTRAL SPECIES	156															ENSGT00940000154361.B #21	ENSGT00940000158783.i.a #22
Passeroidea	ANCESTRAL SPECIES	174															ENSGT00940000154361.B #21	ENSGT00940000158783.i.a #22
Zebra finch	MODERN SPECIES	25	ENSTGUG00000019865	ADAM33 (ENSTGUG00000019919)	ENSTGUG00000029724	EGR4 (ENSTGUG00000023104) #16	ENSTGUG00000029166 #18	ENSTGUG00000015356 #18	CCT7 (ENSTGUG00000025484) #17	PRADC1 (ENSTGUG00000015425) #19	SMYD5 (ENSTGUG00000015434) #20	ENSTGUG00000026057 #22	ENSTGUG00000024934	ENSTGUG00000015459 #23	ENSTGUG00000024799 #24	ENSTGUG00000022247 #25	ENSTGUG00000015491 #26	ENSTGUG00000019785 #22	ENSTGUG00000025354	ENSTGUG00000025586 #23	ENSTGUG00000021645 #23	ENSTGUG00000019090	ENSTGUG00000025867 #24	ENSTGUG00000026873 #25	ENSTGUG00000029577 #26	ENSTGUG00000028265	CYP26B1 (ENSTGUG00000029374) #27	DYSF (ENSTGUG00000015557) #28	EBF4 (ENSTGUG00000023041)	SPEF1 (ENSTGUG00000021168)	C4H20orf27 (ENSTGUG00000029136)	HSPA12B (ENSTGUG00000029036)	ENSTGUG00000028681
Common canary	MODERN SPECIES	141											FBXO41 (ENSSCAG00000016057) #18	CCT7 (ENSSCAG00000016054) #17	PRADC1 (ENSSCAG00000016050) #19	SMYD5 (ENSSCAG00000016029) #20	ENSSCAG00000016019 #21	ENSSCAG00000016017 #22	ENSSCAG00000016015
Medium ground finch	MODERN SPECIES	346													PRADC1 (ENSGFOG00000002514) #19	SMYD5 (ENSGFOG00000002543) #20	ENSGFOG00000002630 #21	ENSGFOG00000002641 #22	ENSGFOG00000002660	SFXN5 (ENSGFOG00000002677) #23	SPR (ENSGFOG00000002691) #25
Passeriformes	ANCESTRAL SPECIES																	ENSGT00940000158783.i.b #22
Passeriformes_d	ANCESTRAL SPECIES																	ENSGT00940000158783.i.b #22
Passeriformes_g	ANCESTRAL SPECIES	5							ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000162199 #16	ENSGT00530000063713.b.a.h #18	ENSGT00530000063713.b.a.g #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000158783.i.b #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00950000182859.A.a.a.a	ENSGT00910000144159.A.a	ENSGT00390000008711	ENSGT00940000159032	ENSGT01100000263535.a.a	ENSGT00960000189762.a	ENSGT00940000161043	ENSGT00940000161413	ENSGT00390000010888
Passeroidea	ANCESTRAL SPECIES	4							ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000162199 #16	ENSGT00530000063713.b.a.h #18	ENSGT00530000063713.b.a.g #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000158783.i.b #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00950000182859.A.a.a.a	ENSGT00910000144159.A.a	ENSGT00390000008711	ENSGT00940000159032	ENSGT01100000263535.a.a	ENSGT00960000189762.a	ENSGT00940000161043	ENSGT00940000161413	ENSGT00390000010888
Zebra finch	MODERN SPECIES	25						ATRN (ENSTGUG00000015245)	ENSTGUG00000019865	ADAM33 (ENSTGUG00000019919)	ENSTGUG00000029724	EGR4 (ENSTGUG00000023104) #16	ENSTGUG00000029166 #18	ENSTGUG00000015356 #18	CCT7 (ENSTGUG00000025484) #17	PRADC1 (ENSTGUG00000015425) #19	SMYD5 (ENSTGUG00000015434) #20	ENSTGUG00000026057 #22	ENSTGUG00000024934	ENSTGUG00000015459 #23	ENSTGUG00000024799 #24	ENSTGUG00000022247 #25	ENSTGUG00000015491 #26	ENSTGUG00000019785 #22	ENSTGUG00000025354	ENSTGUG00000025586 #23	ENSTGUG00000021645 #23	ENSTGUG00000019090	ENSTGUG00000025867 #24	ENSTGUG00000026873 #25	ENSTGUG00000029577 #26	ENSTGUG00000028265	CYP26B1 (ENSTGUG00000029374) #27
Passeriformes	ANCESTRAL SPECIES	4					ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000162199 #16	ENSGT00530000063713.b.a.h #18	ENSGT00530000063713.b.a.g #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783.i.a #22	ENSGT00940000158783.j #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00950000182859.A.a.a.a	ENSGT00910000144159.A.a	ENSGT00390000008711	ENSGT00940000159032	ENSGT01100000263535.a.a	ENSGT00960000189762.a	ENSGT00940000161043	ENSGT00940000161413	ENSGT00390000010888
Passeriformes_d	ANCESTRAL SPECIES	4					ENSGT00940000157346	ENSGT00940000160491	ENSGT00940000158971	ENSGT00940000162199 #16	ENSGT00530000063713.b.a.h #18	ENSGT00530000063713.b.a.g #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00510000047420 #20	ENSGT00940000154361.B #21	ENSGT00940000158783.i.a #22	ENSGT00940000158783.j #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00950000182859.A.a.a.a	ENSGT00910000144159.A.a	ENSGT00390000008711	ENSGT00940000159032	ENSGT01100000263535.a.a	ENSGT00940000161043	ENSGT00940000161413	ENSGT00390000010888	ENSGT00510000047418 #31
Flycatcher	DUPLICATION
Flycatcher	DUPLICATION
Flycatcher	MODERN SPECIES	260					ATRN (ENSFALG00000012728)	ENSFALG00000026859	ENSFALG00000026785	ADAM33 (ENSFALG00000012682)	ENSFALG00000025938	EGR4 (ENSFALG00000012652) #16	ENSFALG00000027959 #18	ENSFALG00000012636 #18	CCT7 (ENSFALG00000012575) #17	ENSFALG00000012513	SMYD5 (ENSFALG00000012493) #20	ENSFALG00000012471 #22	ENSFALG00000027281 #22	ENSFALG00000023429 #22	SFXN5 (ENSFALG00000012459) #23	ENSFALG00000024880	SPR (ENSFALG00000012445) #25
Flycatcher	MODERN SPECIES	260				ATRN (ENSFALG00000012728)	ENSFALG00000026859	ENSFALG00000026785	ADAM33 (ENSFALG00000012682)	ENSFALG00000025938	EGR4 (ENSFALG00000012652) #16	ENSFALG00000027959 #18	ENSFALG00000012636 #18	CCT7 (ENSFALG00000012575) #17	ENSFALG00000012513	SMYD5 (ENSFALG00000012493) #20	ENSFALG00000012471 #22	ENSFALG00000027281 #22	ENSFALG00000023429 #22	SFXN5 (ENSFALG00000012459) #23	ENSFALG00000024880	SPR (ENSFALG00000012445) #25
Flycatcher	MODERN SPECIES	260			ATRN (ENSFALG00000012728)	ENSFALG00000026859	ENSFALG00000026785	ADAM33 (ENSFALG00000012682)	ENSFALG00000025938	EGR4 (ENSFALG00000012652) #16	ENSFALG00000027959 #18	ENSFALG00000012636 #18	CCT7 (ENSFALG00000012575) #17	ENSFALG00000012513	SMYD5 (ENSFALG00000012493) #20	ENSFALG00000012471 #22	ENSFALG00000027281 #22	ENSFALG00000023429 #22	SFXN5 (ENSFALG00000012459) #23	ENSFALG00000024880	SPR (ENSFALG00000012445) #25
African ostrich	MODERN SPECIES	842	DDRGK1 (ENSSCUG00000017586)	ENSSCUG00000017588	ENSSCUG00000017590	SLC4A11 (ENSSCUG00000017591)	DNAAF9 (ENSSCUG00000017600)	ATRN (ENSSCUG00000017656)	GFRA4 (ENSSCUG00000017696)	ADAM33 (ENSSCUG00000017697)	ENSSCUG00000017703 #15	ENSSCUG00000017706	FBXO41 (ENSSCUG00000017710) #18	CCT7 (ENSSCUG00000017714) #17	PRADC1 (ENSSCUG00000017718) #19	SMYD5 (ENSSCUG00000017720) #20	ENSSCUG00000017721 #21	RAB11FIP5 (ENSSCUG00000017722) #22	SFXN5 (ENSSCUG00000017728) #23	SPR (ENSSCUG00000017738) #25	EXOC6B (ENSSCUG00000017743) #26	CYP26B1 (ENSSCUG00000017748) #27	DYSF (ENSSCUG00000017953) #28	ZNF638 (ENSSCUG00000018174) #29	PAIP2B (ENSSCUG00000018175) #30
Australian saltwater crocodile	MODERN SPECIES	65	ENSCPRG00005018819	ENSCPRG00005018817	ENSCPRG00005018815	SLC4A11 (ENSCPRG00005018809)	DNAAF9 (ENSCPRG00005018802)	ATRN (ENSCPRG00005018799)	GFRA4 (ENSCPRG00005018797)	ADAM33 (ENSCPRG00005018796)	ENSCPRG00005018791 #15	EGR4 (ENSCPRG00005018790) #16	FBXO41 (ENSCPRG00005018789) #18	CCT7 (ENSCPRG00005018781) #17	PRADC1 (ENSCPRG00005018767) #19	SMYD5 (ENSCPRG00005018764) #20	ENSCPRG00005018762 #21	RAB11FIP5 (ENSCPRG00005018760) #22	SFXN5 (ENSCPRG00005018757) #23	ENSCPRG00005018756 #24	SPR (ENSCPRG00005018755) #25	EXOC6B (ENSCPRG00005018754) #26	CYP26B1 (ENSCPRG00005018750) #27
Lepidosauria	ANCESTRAL SPECIES	25	ENSGT00390000015948.a	ENSGT00390000017452	ENSGT00950000183109.d	ENSGT00390000001754	ENSGT00940000158491	ENSGT00940000166263	ENSGT00940000164944	ENSGT00390000014530	ENSGT00390000014979	ENSGT00940000163763	ENSGT01030000235337	ENSGT00940000155378.d	ENSGT00940000153534.B	ENSGT00950000182989.D.a.b	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00510000048167.b.a	ENSGT00940000161413	ENSGT00940000161043	ENSGT00960000189762
tuatara	MODERN SPECIES	705											ENSSPUG00000001479	ENSSPUG00000001504	DCTN1 (ENSSPUG00000001520)	NOP56 (ENSSPUG00000001535)	IDH3B (ENSSPUG00000001560)	ENSSPUG00000001583 #22	SFXN5 (ENSSPUG00000001597) #23	ENSSPUG00000001651 #21	SPR (ENSSPUG00000001660) #25	EXOC6B (ENSSPUG00000001675) #26	CYP26B1 (ENSSPUG00000001759) #27
Episquamata	ANCESTRAL SPECIES	3	ENSGT00390000015948.a	ENSGT00390000017452	ENSGT00950000183109.d	ENSGT00390000001754	ENSGT00940000158491	ENSGT00940000166263	ENSGT00940000164944	ENSGT00390000014530	ENSGT00390000014979	ENSGT00940000163763	ENSGT01030000235337	ENSGT00940000155378.d	ENSGT00940000153534.B	ENSGT00950000182989.D.a.b	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00510000048167.b.a	ENSGT00940000161413	ENSGT00940000161043	ENSGT00960000189762
Laterata	ANCESTRAL SPECIES	9	ENSGT00390000015948.a	ENSGT00390000017452	ENSGT00950000183109.d	ENSGT00390000001754	ENSGT00940000158491	ENSGT00940000166263	ENSGT00940000164944	ENSGT00390000014530	ENSGT00390000014979	ENSGT00940000163763	ENSGT01030000235337	ENSGT00940000155378.d	ENSGT00940000153534.B	ENSGT00950000182989.D.a.b	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00510000048167.b.a	ENSGT00940000161413	ENSGT00940000161043	ENSGT00960000189762
Common wall lizard	MODERN SPECIES	17	CCDC142 (ENSPMRG00000016418)	ENSPMRG00000016414	ENSPMRG00000016407	WBP1 (ENSPMRG00000016385)	INO80B (ENSPMRG00000016380)	ENSPMRG00000016376	ENSPMRG00000016363	ENSPMRG00000016351	WDR54 (ENSPMRG00000016308)	DCTN1 (ENSPMRG00000016261)	NOP56 (ENSPMRG00000016227)	IDH3B (ENSPMRG00000016220)	ENSPMRG00000016213	ENSPMRG00000016209	ENSPMRG00000016206 #21	RAB11FIP5 (ENSPMRG00000016200) #22	SFXN5 (ENSPMRG00000016190) #23	EMX1 (ENSPMRG00000016184) #24	SPR (ENSPMRG00000016175) #25	ENSPMRG00000016173	EXOC6B (ENSPMRG00000016153) #26	CYP26B1 (ENSPMRG00000016137) #27	DYSF (ENSPMRG00000011495) #28	ZNF638 (ENSPMRG00000010839) #29	ENSPMRG00000010823	ENSPMRG00000010816 ##29	PAIP2B (ENSPMRG00000010806) #30	NAGK (ENSPMRG00000010797) #31	TEX261 (ENSPMRG00000010788)	ANKRD53 (ENSPMRG00000010779)	ENSPMRG00000010768
Argentine black and white tegu	MODERN SPECIES	93	CCDC142 (ENSSMRG00000015199)	ENSSMRG00000015200	MOGS (ENSSMRG00000015202)	WBP1 (ENSSMRG00000015203)	INO80B (ENSSMRG00000015204)	RTKN (ENSSMRG00000015205)	ENSSMRG00000015206	ENSSMRG00000015207	C2orf81 (ENSSMRG00000015208)	ENSSMRG00000015209	ENSSMRG00000015210	DCTN1 (ENSSMRG00000015211)	NOP56 (ENSSMRG00000015212)	IDH3B (ENSSMRG00000015215)	ENSSMRG00000015216 #21	RAB11FIP5 (ENSSMRG00000015217) #22	SFXN5 (ENSSMRG00000015218) #23	EMX1 (ENSSMRG00000015219) #24	SPR (ENSSMRG00000015223) #25	EXOC6B (ENSSMRG00000015270) #26	CYP26B1 (ENSSMRG00000015271) #27	DYSF (ENSSMRG00000015274) #28	ZNF638 (ENSSMRG00000015275) #29	PAIP2B (ENSSMRG00000015278) #30	NAGK (ENSSMRG00000015279) #31	TEX261 (ENSSMRG00000015283)	ENSSMRG00000015284	ENSSMRG00000015285	ENSSMRG00000015286	VAX2 (ENSSMRG00000015287)	ENSSMRG00000015288
Toxicofera	ANCESTRAL SPECIES	42	ENSGT00390000015948.a	ENSGT00390000017452	ENSGT00950000183109.d	ENSGT00390000001754	ENSGT00940000158491.g	ENSGT00940000166263	ENSGT00940000164944	ENSGT00390000014530	ENSGT00390000014979	ENSGT00940000163763	ENSGT01030000235337	ENSGT00940000155378.d	ENSGT00940000153534.B	ENSGT00950000182989.D.a.b	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT01030000235675	ENSGT00960000189762	ENSGT01100000263535.a.a	ENSGT00940000159032
Elapidae	ANCESTRAL SPECIES	11	ENSGT00390000015948.a	ENSGT00390000017452	ENSGT00950000183109.d	ENSGT00390000001754	ENSGT00940000158491.g	ENSGT00940000166263	ENSGT00940000164944	ENSGT00390000014530	ENSGT00390000014979	ENSGT00940000163763	ENSGT01030000235337	ENSGT00940000155378.d	ENSGT00940000153534.B.a	ENSGT00950000182989.D.a.b	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a.mb.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00390000010888	ENSGT00390000005650	ENSGT00940000161413	ENSGT01030000235675	ENSGT00960000189762	ENSGT01100000263535.a.a	ENSGT00940000159032
Elapidae_a	ANCESTRAL SPECIES	55	ENSGT00390000015948.a	ENSGT00390000017452	ENSGT00950000183109.d	ENSGT00390000001754	ENSGT00940000158491.g	ENSGT00940000166263	ENSGT00940000164944	ENSGT00390000014530	ENSGT00390000014979	ENSGT00940000163763	ENSGT01030000235337	ENSGT00940000155378.d	ENSGT00940000153534.B.a	ENSGT00950000182989.D.a.b	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a.nb #26	ENSGT00390000005739.a.a.mb.a #26	ENSGT00800000124060.A.a #27
Blue-lipped sea krait	MODERN SPECIES	2975																ENSLLTG00000011799 #22
Acanthophiinae	ANCESTRAL SPECIES	56	ENSGT00940000161036.A	ENSGT00390000015948.a	ENSGT00390000017452	ENSGT00950000183109.d	ENSGT00390000001754	ENSGT00940000158491.g	ENSGT00940000166263	ENSGT00940000164944	ENSGT00390000014530	ENSGT00390000014979	ENSGT00940000163763	ENSGT00940000155378.d	ENSGT00940000153534.B.a	ENSGT00950000182989.D.a.b	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a.mb.b #26	ENSGT00390000005739.a.a.mb.a #26	ENSGT00800000124060.A.a #27
Eastern brown snake	MODERN SPECIES	91	ENSPTXG00000017854	ENSPTXG00000017853	MOGS (ENSPTXG00000017852)	WBP1 (ENSPTXG00000017851)	INO80B (ENSPTXG00000017850)	RTKN (ENSPTXG00000017847)	ENSPTXG00000017846	ENSPTXG00000017845	WDR54 (ENSPTXG00000017844)	ENSPTXG00000017842	ENSPTXG00000017840	DCTN1 (ENSPTXG00000011269)	ENSPTXG00000011223	IDH3B (ENSPTXG00000011221)	ENSPTXG00000011220 #21	ENSPTXG00000011219 #22	SFXN5 (ENSPTXG00000011218) #23	EMX1 (ENSPTXG00000011217) #24	SPR (ENSPTXG00000011216) #25	ENSPTXG00000011215 #26	ENSPTXG00000011214 #26	CYP26B1 (ENSPTXG00000011213) #27
Mainland tiger snake	MODERN SPECIES	2847																ENSNSUG00000000279 #22
Indian cobra	MODERN SPECIES	3	ENSNNAG00000015095	ENSNNAG00000015071	MOGS (ENSNNAG00000015062)	WBP1 (ENSNNAG00000015007)	INO80B (ENSNNAG00000014975)	RTKN (ENSNNAG00000014868)	ENSNNAG00000014831	WDR54 (ENSNNAG00000014818)	ENSNNAG00000014797	ENSNNAG00000014779	ENSNNAG00000014758	DCTN1 (ENSNNAG00000009368)	NOP56 (ENSNNAG00000008978)	IDH3B (ENSNNAG00000008921)	ENSNNAG00000008888 #21	ENSNNAG00000008858 #22	SFXN5 (ENSNNAG00000008747) #23	EMX1 (ENSNNAG00000008712) #24	SPR (ENSNNAG00000008683) #25	EXOC6B (ENSNNAG00000007718) #26	CYP26B1 (ENSNNAG00000007608) #27	ENSNNAG00000007581 #29	ENSNNAG00000007554 #31	PAIP2B (ENSNNAG00000015136) #30	ENSNNAG00000015114 #31	TEX261 (ENSNNAG00000015099)	ANKRD53 (ENSNNAG00000015086)	ENSNNAG00000015054	ENSNNAG00000015044	SPEF1 (ENSNNAG00000015036)	ENSNNAG00000014979
Lizard	MODERN SPECIES	1412																ENSACAG00000036507 #22	ENSACAG00000043717	ENSACAG00000008008 #23	ENSACAG00000037873
Anura	ANCESTRAL SPECIES	164										ENSGT00940000153123.B #15	ENSGT00940000162199 #16	ENSGT00530000063713.b.a #18	ENSGT00550000074832 #17	ENSGT00390000009837 #19	ENSGT00940000154361.B #21	ENSGT00940000158783 #22	ENSGT01030000234641.a.a #23	ENSGT00940000161476 #24	ENSGT00440000033609 #25	ENSGT00390000005739.a.a #26	ENSGT00800000124060.A.a #27	ENSGT00940000156187 #28	ENSGT00940000153322.A #29	ENSGT00390000017284.a.b #30	ENSGT00510000047418 #31	ENSGT00940000161043	ENSGT00940000161413	ENSGT00510000048167.b.a	ENSGT00390000005650	ENSGT00980000198740	ENSGT00390000010888
Frog	MODERN SPECIES		ENSXETG00000042875	ENSXETG00000045599	ENSXETG00000043622	ENSXETG00000038109	alms1 (ENSXETG00000036288) #15	ENSXETG00000046718	ENSXETG00000048938	mgc108497 (ENSXETG00000033502)	egr4 (ENSXETG00000040986) #16	fbxo41 (ENSXETG00000011776) #18	cct7 (ENSXETG00000011778) #17	pradc1 (ENSXETG00000011777) #19	glod5 (ENSXETG00000039015)	ENSXETG00000043433	not (ENSXETG00000011780) #21	rab11fip5 (ENSXETG00000011781) #22	sfxn5 (ENSXETG00000011782) #23	ENSXETG00000039136	emx1 (ENSXETG00000048254) #24	spr (ENSXETG00000044997) #25	ENSXETG00000047352	ENSXETG00000046522	ptcd3 (ENSXETG00000017970)	immt (ENSXETG00000017971)	reep1 (ENSXETG00000036231)	kdm3a (ENSXETG00000017975)	chmp3 (ENSXETG00000017980)	chmp3 (ENSXETG00000034440)	rmnd5a (ENSXETG00000001924)	CD8A (ENSXETG00000041717)	XB989856 [provisional] (ENSXETG00000042065)
Leishan spiny toad	MODERN SPECIES		GFRA4 (ENSLLEG00000027570)	ENSLLEG00000027547	ATRN (ENSLLEG00000027210)	DNAAF9 (ENSLLEG00000026980)	ENSLLEG00000026896	ENSLLEG00000026871	SLC4A11 (ENSLLEG00000026555)	ENSLLEG00000026501	ENSLLEG00000026488	ENSLLEG00000026465	DDRGK1 (ENSLLEG00000026398)	ENSLLEG00000026355 #21	ENSLLEG00000026339	ENSLLEG00000026275	ENSLLEG00000026258	ENSLLEG00000026173 #22	SFXN5 (ENSLLEG00000026011) #23	EMX1 (ENSLLEG00000025953) #24	ENSLLEG00000025907 #25	ENSLLEG00000025891	EXOC6B (ENSLLEG00000023945) #26	ENSLLEG00000023814	CYP26B1 (ENSLLEG00000023718) #27	ENSLLEG00000023693	ENSLLEG00000023679	ENSLLEG00000023659	ENSLLEG00000023625	ENSLLEG00000023166	ENSLLEG00000023075	DYSF (ENSLLEG00000022637) #28	ENSLLEG00000021927 #29