Boreoeutheria	ANCESTRAL SPECIES	12	ENSGT00940000170602	ENSGT00940000161716 #10	ENSGT00390000013187 #11	ENSGT00390000000592 #12	ENSGT00940000157650 #13	ENSGT00390000018426 #14	ENSGT01030000234558.A.a.a.a #15	ENSGT01030000234582.f.b.g	ENSGT00390000016398	ENSGT00390000017745 #16	ENSGT00970000193372.a.b #17	ENSGT00940000160621 #18	ENSGT00940000162489 #19	ENSGT00940000154419.a.a #20	ENSGT00940000154419.a.b #21	ENSGT00940000157637.b #22	ENSGT00940000162936 #24	ENSGT00390000005492 #23	ENSGT00940000154273.b #25	ENSGT00940000159400 #26	ENSGT00940000160057 #27	ENSGT00940000156850.a.a	ENSGT00390000017226 #28	ENSGT00510000048483 #29	ENSGT00940000159845 #30	ENSGT01000000214413.b.b #31	ENSGT00940000160860 #32	ENSGT01030000234598.a.a.b #33	ENSGT00940000162123 #34	ENSGT00940000159264 #35	ENSGT00390000017455 #36
Euarchontoglires	ANCESTRAL SPECIES	12	ENSGT00940000161811 #9	ENSGT00940000161716 #10	ENSGT00390000013187 #11	ENSGT00390000000592 #12	ENSGT00940000157650 #13	ENSGT00390000018426 #14	ENSGT01030000234558.A.a.a.a #15	ENSGT01030000234582.f.b.g	ENSGT00390000016398	ENSGT00390000017745 #16	ENSGT00970000193372.a.b #17	ENSGT00940000160621 #18	ENSGT00940000162489 #19	ENSGT00940000154419.a.a #20	ENSGT00940000154419.a.b #21	ENSGT00940000157637.b #22	ENSGT00940000162936 #24	ENSGT00390000005492 #23	ENSGT00940000154273.b #25	ENSGT00940000159400 #26	ENSGT00940000160057 #27	ENSGT00940000156850.a.a	ENSGT00390000017226 #28	ENSGT00510000048483 #29	ENSGT00940000159845 #30	ENSGT01000000214413.b.b #31	ENSGT00940000160860 #32	ENSGT01030000234598.a.a.b #33	ENSGT00940000162123 #34	ENSGT00940000159264 #35	ENSGT00390000017455 #36
Euarchontoglires_A	ANCESTRAL SPECIES	12	ENSGT00940000159751 #8	ENSGT00940000161811 #9	ENSGT00940000161716 #10	ENSGT00390000013187 #11	ENSGT00390000000592 #12	ENSGT00940000157650 #13	ENSGT00390000018426 #14	ENSGT01030000234558.A.a.a.a #15	ENSGT01030000234582.f.b.g	ENSGT00390000017745 #16	ENSGT00970000193372.a.b #17	ENSGT00940000160621 #18	ENSGT00940000162489 #19	ENSGT00940000154419.a.a #20	ENSGT00940000154419.a.b #21	ENSGT00940000157637.b #22	ENSGT00940000162936 #24	ENSGT00390000005492 #23	ENSGT00940000154273.b #25	ENSGT00940000159400 #26	ENSGT00940000160057 #27	ENSGT00940000156850.a.a	ENSGT00390000017226 #28	ENSGT00510000048483 #29	ENSGT00940000159845 #30	ENSGT01000000214413.b.b #31	ENSGT00940000160860 #32	ENSGT01030000234598.a.a.b #33	ENSGT00940000162123 #34	ENSGT00940000159264 #35	ENSGT00390000017455 #36
Glires	ANCESTRAL SPECIES	11	ENSGT00940000159751 #8	ENSGT00940000161811 #9	ENSGT00940000161716 #10	ENSGT00390000013187 #11	ENSGT00390000000592 #12	ENSGT00940000157650 #13	ENSGT00390000018426 #14	ENSGT01030000234558.A.a.a.a #15	ENSGT01030000234582.f.b.g	ENSGT00390000017745 #16	ENSGT00970000193372.a.b #17	ENSGT00940000160621 #18	ENSGT00940000162489 #19	ENSGT00940000154419.a.a #20	ENSGT00940000154419.a.b #21	ENSGT00940000157637.b #22	ENSGT00940000162936 #24	ENSGT00390000005492 #23	ENSGT00940000154273.b #25	ENSGT00940000159400 #26	ENSGT00940000160057 #27	ENSGT00940000156850.a.a	ENSGT00390000017226 #28	ENSGT00510000048483 #29	ENSGT00940000159845 #30	ENSGT01000000214413.b.b #31	ENSGT00940000160860 #32	ENSGT01030000234598.a.a.b #33	ENSGT00940000162123 #34	ENSGT00940000159264 #35	ENSGT00390000017455 #36
Rodentia	ANCESTRAL SPECIES	11	ENSGT00940000159751 #8	ENSGT00940000161811 #9	ENSGT00940000161716 #10	ENSGT00390000013187 #11	ENSGT00390000000592 #12	ENSGT00940000157650 #13	ENSGT00390000018426 #14	ENSGT01030000234558.A.a.a.a #15	ENSGT01030000234582.f.b.g	ENSGT00390000017745 #16	ENSGT00970000193372.a.b #17	ENSGT00940000160621 #18	ENSGT00940000162489 #19	ENSGT00940000154419.a.a #20	ENSGT00940000154419.a.b #21	ENSGT00940000157637.b #22	ENSGT00940000162936 #24	ENSGT00390000005492 #23	ENSGT00940000154273.b #25	ENSGT00940000159400 #26	ENSGT00940000160057 #27	ENSGT00940000156850.a.a	ENSGT00390000017226 #28	ENSGT00510000048483 #29	ENSGT00940000159845 #30	ENSGT01000000214413.b.b #31	ENSGT00940000160860 #32	ENSGT01030000234598.a.a.b #33	ENSGT00940000162123 #34	ENSGT00940000159264 #35	ENSGT00390000017455 #36
Rodentia_A	ANCESTRAL SPECIES	10	ENSGT00940000159751 #8	ENSGT00940000161811 #9	ENSGT00940000161716 #10	ENSGT00390000013187 #11	ENSGT00390000000592 #12	ENSGT00940000157650 #13	ENSGT00390000018426 #14	ENSGT01030000234558.A.a.a.a #15	ENSGT01030000234582.f.b.g	ENSGT00390000017745 #16	ENSGT00970000193372.a.b #17	ENSGT00940000160621 #18	ENSGT00940000162489 #19	ENSGT00940000154419.a.a #20	ENSGT00940000154419.a.b #21	ENSGT00940000157637.b #22	ENSGT00940000162936 #24	ENSGT00390000005492 #23	ENSGT00940000154273.b #25	ENSGT00940000159400 #26	ENSGT00940000160057 #27	ENSGT00940000156850.a.a	ENSGT00390000017226 #28	ENSGT00510000048483 #29	ENSGT00940000159845 #30	ENSGT01000000214413.b.b #31	ENSGT00940000160860 #32	ENSGT01030000234598.a.a.b #33	ENSGT00940000162123 #34	ENSGT00940000159264 #35	ENSGT00390000017455 #36
Hystricomorpha	ANCESTRAL SPECIES	17	ENSGT00940000163742	ENSGT00940000159751 #8	ENSGT00940000161811 #9	ENSGT00940000161716 #10	ENSGT00390000013187 #11	ENSGT00390000000592 #12	ENSGT00940000157650 #13	ENSGT00390000018426 #14	ENSGT01030000234558.A.a.a.a #15	ENSGT00390000017745 #16	ENSGT00970000193372.a.b #17	ENSGT00940000160621 #18	ENSGT00940000162489 #19	ENSGT00940000154419.a.a #20	ENSGT00940000154419.a.b #21	ENSGT00940000157637.b #22	ENSGT00940000162936 #24	ENSGT00390000005492 #23	ENSGT00940000154273.b #25	ENSGT00940000159400 #26	ENSGT00940000160057 #27	ENSGT00940000156850.a.a	ENSGT00390000017226 #28	ENSGT00510000048483 #29	ENSGT00940000159845 #30	ENSGT01000000214413.b.b #31	ENSGT00940000160860 #32	ENSGT01030000234598.a.a.b #33	ENSGT00940000162123 #34	ENSGT00940000159264 #35	ENSGT00390000017455 #36
Hystricomorpha_a	ANCESTRAL SPECIES	16	ENSGT00940000163742	ENSGT00940000159751 #8	ENSGT00940000161811 #9	ENSGT00940000161716 #10	ENSGT00390000013187 #11	ENSGT00390000000592 #12	ENSGT00940000157650 #13	ENSGT00390000018426 #14	ENSGT01030000234558.A.a.a.a #15	ENSGT00390000017745 #16	ENSGT00970000193372.a.b #17	ENSGT00940000160621 #18	ENSGT00940000162489 #19	ENSGT00940000154419.a.a #20	ENSGT00940000154419.a.b #21	ENSGT00940000157637.b #22	ENSGT00940000162936 #24	ENSGT00390000005492 #23	ENSGT00940000154273.b #25	ENSGT00940000159400 #26	ENSGT00940000160057 #27	ENSGT00940000156850.a.a	ENSGT00390000017226 #28	ENSGT00510000048483 #29	ENSGT00940000159845 #30	ENSGT01000000214413.b.b #31	ENSGT00940000160860 #32	ENSGT01030000234598.a.a.b #33	ENSGT00940000162123 #34	ENSGT00940000159264 #35	ENSGT00390000017455 #36
Guinea pig	MODERN SPECIES	30	SH2B2 (ENSCPOG00000007558) #7	CUX1 (ENSCPOG00000008564) #8	MYL10 (ENSCPOG00000022246) #9	COL26A1 (ENSCPOG00000032713) #10	IFT22 (ENSCPOG00000035118) #11	FIS1 (ENSCPOG00000021728) #12	CLDN15 (ENSCPOG00000026288) #13	ZNHIT1 (ENSCPOG00000032415) #14	PLOD3 (ENSCPOG00000002777) #15	VGF (ENSCPOG00000013537) #16	AP1S1 (ENSCPOG00000013536) #17	SERPINE1 (ENSCPOG00000000174) #18	TRIM56 (ENSCPOG00000034485) #19	ENSCPOG00000030234 #20	ENSCPOG00000038634 #21	ACHE (ENSCPOG00000001746) #22	SRRT (ENSCPOG00000001739) #23	UFSP1 (ENSCPOG00000001745) #24	TRIP6 (ENSCPOG00000001737) #25	SLC12A9 (ENSCPOG00000001735) #26	EPHB4 (ENSCPOG00000014491) #27	EPO (ENSCPOG00000021586) #28	POP7 (ENSCPOG00000005767) #29	GIGYF1 (ENSCPOG00000013604) #30	GNB2 (ENSCPOG00000019845) #31	ACTL6B (ENSCPOG00000005145) #32	TFR2 (ENSCPOG00000011162) #33	MOSPD3 (ENSCPOG00000006113) #34	PCOLCE (ENSCPOG00000025385) #35	FBXO24 (ENSCPOG00000006109) #36	LRCH4 (ENSCPOG00000006102) #37