Mus	ANCESTRAL SPECIES	21	ENSGT00940000153801.a	ENSGT00940000160286	ENSGT00940000160060 #7	ENSGT00390000017359 #8	ENSGT00940000156947 #9	ENSGT00940000161859 #10	ENSGT00390000006233.c.a.a #11	ENSGT00940000160198 #12	ENSGT00530000063694.a #13	ENSGT00950000183213.a.a.b #14	ENSGT00940000157079.a #17	ENSGT00940000159044 #18	ENSGT00530000063113.C #19	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00940000161735 #25	ENSGT00950000183180.a.b #26	ENSGT00390000017030.b.b #27	ENSGT00940000158438 #28	ENSGT00940000162408 #29	ENSGT01090000260100.A #31	ENSGT00390000006663 #30	ENSGT00940000157078 #32	ENSGT00510000048041 #33	ENSGT00940000160887 #34	ENSGT00940000160955 #35	ENSGT01030000234648.a.b.a.a.a #36	ENSGT00730000111329 #37	ENSGT00410000025882.b
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000153801.a	ENSGT00940000160286	ENSGT00940000160060 #7	ENSGT00390000017359 #8	ENSGT00940000156947 #9	ENSGT00940000161859 #10	ENSGT00390000006233.c.a.a #11	ENSGT00940000160198 #12	ENSGT00530000063694.a #13	ENSGT00950000183213.a.a.b #14	ENSGT00940000157079.a #17	ENSGT00940000159044 #18	ENSGT00530000063113.C #19	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00940000161735.k #25	ENSGT00950000183180.a.b #26	ENSGT00390000017030.b.b #27	ENSGT00940000158438 #28	ENSGT00940000162408 #29	ENSGT01090000260100.A #31	ENSGT00390000006663 #30	ENSGT00940000157078 #32	ENSGT00510000048041 #33	ENSGT00940000160887 #34	ENSGT00940000160955 #35	ENSGT01030000234648.a.b.a.a.a #36	ENSGT00730000111329 #37	ENSGT00410000025882.b
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000153801.a	ENSGT00940000160286	ENSGT00940000160060 #7	ENSGT00390000017359 #8	ENSGT00940000156947 #9	ENSGT00940000161859 #10	ENSGT00390000006233.c.a.a #11	ENSGT00940000160198 #12	ENSGT00530000063694.a #13	ENSGT00950000183213.a.a.b #14	ENSGT00940000157079.a #17	ENSGT00940000159044 #18	ENSGT00530000063113.C #19	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00940000161735.k #25	ENSGT00950000183180.a.b #26	ENSGT00390000017030.b.b #27	ENSGT00940000158438 #28	ENSGT00940000162408 #29	ENSGT01090000260100.A #31	ENSGT00390000006663 #30	ENSGT00940000157078 #32	ENSGT00510000048041 #33	ENSGT00940000160887 #34	ENSGT00940000160955 #35	ENSGT01030000234648.a.b.a.a.a #36	ENSGT00730000111329 #37	ENSGT00410000025882.b
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000153801.a	ENSGT00940000160286	ENSGT00940000160060 #7	ENSGT00390000017359 #8	ENSGT00940000156947 #9	ENSGT00940000161859 #10	ENSGT00390000006233.c.a.a #11	ENSGT00940000160198 #12	ENSGT00530000063694.a #13	ENSGT00950000183213.a.a.b #14	ENSGT00940000157079.a #17	ENSGT00940000159044 #18	ENSGT00530000063113.C #19	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00940000161735.k #25	ENSGT00950000183180.a.b #26	ENSGT00390000017030.b.b #27	ENSGT00940000158438 #28	ENSGT00940000162408 #29	ENSGT01090000260100.A #31	ENSGT00390000006663 #30	ENSGT00940000157078 #32	ENSGT00510000048041 #33	ENSGT00940000160887 #34	ENSGT00940000160955 #35	ENSGT01030000234648.a.b.a.a.a #36	ENSGT00730000111329 #37	ENSGT00410000025882.b
spretus	MODERN SPECIES	8	Pgap6 (MGP_SPRETEiJ_G0022183) #7	Mrpl28 (MGP_SPRETEiJ_G0022184) #8	Axin1 (MGP_SPRETEiJ_G0022185) #9	Pdia2 (MGP_SPRETEiJ_G0022186) #10	Arhgdig (MGP_SPRETEiJ_G0022187) #11	Rgs11 (MGP_SPRETEiJ_G0022188) #12	Fam234a (MGP_SPRETEiJ_G0022189) #13	Luc7l (MGP_SPRETEiJ_G0022190) #14	MGP_SPRETEiJ_G0022191 #15	MGP_SPRETEiJ_G0022192 #16	Neurl1b (MGP_SPRETEiJ_G0022193) #17	Dusp1 (MGP_SPRETEiJ_G0022194) #18	Ergic1 (MGP_SPRETEiJ_G0022195) #19	MGP_SPRETEiJ_G0022196 #20	Crebrf (MGP_SPRETEiJ_G0022197) #21	Bnip1 (MGP_SPRETEiJ_G0022198) #22	Nkx2-5 (MGP_SPRETEiJ_G0022199) #23	MGP_SPRETEiJ_G0022200 #24	MGP_SPRETEiJ_G0022201 #25	Phf1 (MGP_SPRETEiJ_G0022202) #26	Cuta (MGP_SPRETEiJ_G0022203) #27	Syngap1 (MGP_SPRETEiJ_G0022204) #28	Zbtb9 (MGP_SPRETEiJ_G0022205) #29	Ggnbp1 (MGP_SPRETEiJ_G0022206) #30	Bak1 (MGP_SPRETEiJ_G0022207) #31	Itpr3 (MGP_SPRETEiJ_G0022208) #32	Uqcc2 (MGP_SPRETEiJ_G0022209) #33	Ip6k3 (MGP_SPRETEiJ_G0022210) #34	Lemd2 (MGP_SPRETEiJ_G0022211) #35	Grm4 (MGP_SPRETEiJ_G0022212) #36	MGP_SPRETEiJ_G0022213 #37
Steppe mouse	MODERN SPECIES	2698	Mrpl28 (ENSMSIG00000023867) #8	Axin1 (ENSMSIG00000023878) #9	Arhgdig (ENSMSIG00000023904) #11	Pdia2 (ENSMSIG00000023925) #10	Rgs11 (ENSMSIG00000023974) #12	Fam234a (ENSMSIG00000024174) #13	Luc7l (ENSMSIG00000024237) #14	ENSMSIG00000024264 #16	Neurl1b (ENSMSIG00000025549) #17	ENSMSIG00000025563	Dusp1 (ENSMSIG00000025579) #18	ENSMSIG00000025591	Ergic1 (ENSMSIG00000025604) #19	ENSMSIG00000025620 #20	Crebrf (ENSMSIG00000025640) #21	Bnip1 (ENSMSIG00000025666) #22	Nkx2-5 (ENSMSIG00000025708) #23
Mouse	MODERN SPECIES	8	Decr2 (ENSMUSG00000036775)	Nme4 (ENSMUSG00000024177)	Pgap6 (ENSMUSG00000024180) #7	Mrpl28 (ENSMUSG00000024181) #8	Axin1 (ENSMUSG00000024182) #9	Pdia2 (ENSMUSG00000024184) #10	Arhgdig (ENSMUSG00000073433) #11	Rgs11 (ENSMUSG00000024186) #12	Fam234a (ENSMUSG00000024187) #13	Luc7l (ENSMUSG00000024188) #14	Neurl1b (ENSMUSG00000034413) #17	Dusp1 (ENSMUSG00000024190) #18	Ergic1 (ENSMUSG00000001576) #19	Atp6v0e (ENSMUSG00000015575) #20	Crebrf (ENSMUSG00000048249) #21	Bnip1 (ENSMUSG00000024191) #22	Nkx2-5 (ENSMUSG00000015579) #23	Kifc5b (ENSMUSG00000024301) #25	Phf1 (ENSMUSG00000024193) #26	Cuta (ENSMUSG00000024194) #27	Syngap1 (ENSMUSG00000067629) #28	Zbtb9 (ENSMUSG00000079605) #29	Ggnbp1 (ENSMUSG00000048731) #30	Bak1 (ENSMUSG00000057789) #31	Itpr3 (ENSMUSG00000042644) #32	Uqcc2 (ENSMUSG00000024208) #33	Ip6k3 (ENSMUSG00000024210) #34	Lemd2 (ENSMUSG00000044857) #35	Grm4 (ENSMUSG00000063239) #36	Hmga1 (ENSMUSG00000046711) #37	Smim29 (ENSMUSG00000062753)
Ryukyu mouse	MODERN SPECIES	8	MGP_CAROLIEiJ_G0021270	Nme4 (MGP_CAROLIEiJ_G0021271)	Pgap6 (MGP_CAROLIEiJ_G0021272) #7	Mrpl28 (MGP_CAROLIEiJ_G0021273) #8	Axin1 (MGP_CAROLIEiJ_G0021274) #9	Pdia2 (MGP_CAROLIEiJ_G0021275) #10	Arhgdig (MGP_CAROLIEiJ_G0021276) #11	Rgs11 (MGP_CAROLIEiJ_G0021277) #12	Fam234a (MGP_CAROLIEiJ_G0021278) #13	Luc7l (MGP_CAROLIEiJ_G0021279) #14	Neurl1b (MGP_CAROLIEiJ_G0021280) #17	Dusp1 (MGP_CAROLIEiJ_G0021281) #18	Ergic1 (MGP_CAROLIEiJ_G0021282) #19	MGP_CAROLIEiJ_G0021283 #20	Crebrf (MGP_CAROLIEiJ_G0021284) #21	Bnip1 (MGP_CAROLIEiJ_G0021285) #22	Nkx2-5 (MGP_CAROLIEiJ_G0021286) #23	MGP_CAROLIEiJ_G0021287 #25	Phf1 (MGP_CAROLIEiJ_G0021289) #26	Cuta (MGP_CAROLIEiJ_G0021290) #27	Syngap1 (MGP_CAROLIEiJ_G0021291) #28	Zbtb9 (MGP_CAROLIEiJ_G0021292) #29	Ggnbp1 (MGP_CAROLIEiJ_G0021293) #30	Bak1 (MGP_CAROLIEiJ_G0021294) #31	Itpr3 (MGP_CAROLIEiJ_G0021295) #32	Uqcc2 (MGP_CAROLIEiJ_G0021296) #33	Ip6k3 (MGP_CAROLIEiJ_G0021297) #34	Lemd2 (MGP_CAROLIEiJ_G0021298) #35	Grm4 (MGP_CAROLIEiJ_G0021299) #36	MGP_CAROLIEiJ_G0021300 #37	MGP_CAROLIEiJ_G0021301 #37
Shrew mouse	MODERN SPECIES	13	MGP_PahariEiJ_G0023588	Nme4 (MGP_PahariEiJ_G0023589)	Pgap6 (MGP_PahariEiJ_G0023590) #7	Mrpl28 (MGP_PahariEiJ_G0023591) #8	Axin1 (MGP_PahariEiJ_G0023592) #9	Pdia2 (MGP_PahariEiJ_G0023593) #10	Arhgdig (MGP_PahariEiJ_G0023594) #11	Rgs11 (MGP_PahariEiJ_G0023595) #12	MGP_PahariEiJ_G0023596	Luc7l (MGP_PahariEiJ_G0023597) #14	Neurl1b (MGP_PahariEiJ_G0023598) #17	Dusp1 (MGP_PahariEiJ_G0023599) #18	Ergic1 (MGP_PahariEiJ_G0023600) #19	MGP_PahariEiJ_G0023601 #20	Crebrf (MGP_PahariEiJ_G0023602) #21	Bnip1 (MGP_PahariEiJ_G0023603) #22	Nkx2-5 (MGP_PahariEiJ_G0023604) #23	MGP_PahariEiJ_G0023606 #25	MGP_PahariEiJ_G0023605 #25	Phf1 (MGP_PahariEiJ_G0023607) #26	Cuta (MGP_PahariEiJ_G0023608) #27	Syngap1 (MGP_PahariEiJ_G0023609) #28	Zbtb9 (MGP_PahariEiJ_G0023610) #29	Ggnbp1 (MGP_PahariEiJ_G0023611) #30	Bak1 (MGP_PahariEiJ_G0023612) #31	Itpr3 (MGP_PahariEiJ_G0023613) #32	Uqcc2 (MGP_PahariEiJ_G0023614) #33	Ip6k3 (MGP_PahariEiJ_G0023615) #34	Lemd2 (MGP_PahariEiJ_G0023616) #35	Grm4 (MGP_PahariEiJ_G0023617) #36	MGP_PahariEiJ_G0023618 #37