Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00940000153052.c.b.b.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00900000143489 #17	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537	ENSGT00940000160017
Primates	ANCESTRAL SPECIES	8	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00900000143489 #17	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537	ENSGT00940000160017
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.a.a.h.g ##18	ENSGT00940000163300	ENSGT00900000143489 #17	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537	ENSGT00940000160017
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00900000143489 #17	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537.f	ENSGT00940000160017
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00910000148172 #9	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00900000143489 #17	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a	ENSGT00940000159824.c #29	ENSGT00910000146891	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00910000148172 #9	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00900000143489 #17	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a	ENSGT00940000159824.c #29	ENSGT00910000146891	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37
Hominidae	ANCESTRAL SPECIES	7	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00910000148172 #9	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000155445.e.a.a	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00900000143489 #17	ENSGT00390000014165.c.b #18	ENSGT00390000017004.a.b.m.a.b #19	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a	ENSGT00940000159824.c #29	ENSGT00910000146891	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00910000148172 #9	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000155445.e.a.a	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00900000143489 #17	ENSGT00390000014165.c.b #18	ENSGT00390000017004.a.b.m.a.b #19	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824.c #29	ENSGT00910000146891	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537.f.a
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00910000148172 #9	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000155445.e.a.a	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00900000143489 #17	ENSGT00390000014165.c.b #18	ENSGT00390000017004.a.b.m.a.b #19	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824.c #29	ENSGT00910000146891	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537.f.a
Pan	ANCESTRAL SPECIES	10	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00910000148172 #9	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000155445.e.a.a	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00900000143489 #17	ENSGT00390000014165.c.b #18	ENSGT00390000017004.a.b.m.a.b #19	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824.c #29	ENSGT00910000146891	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000166141 #36	ENSGT00390000000360.q.b
Chimpanzee	MODERN SPECIES	18	FBXW11 (ENSPTRG00000017526) #7	STK10 (ENSPTRG00000017527) #8	ENSPTRG00000050304 #9	EFCAB9 (ENSPTRG00000034173) #10	UBTD2 (ENSPTRG00000044878) #11	SH3PXD2B (ENSPTRG00000017531) #12	NEURL1B (ENSPTRG00000033712) #13	ENSPTRG00000046003 #14	DUSP1 (ENSPTRG00000017534) #15	ERGIC1 (ENSPTRG00000017535) #16	ENSPTRG00000046007 #17	RPL26L1 (ENSPTRG00000043990) #18	ENSPTRG00000041040 #19	ATP6V0E1 (ENSPTRG00000017538) #20	CREBRF (ENSPTRG00000017540) #21	BNIP1 (ENSPTRG00000017541) #22	NKX2-5 (ENSPTRG00000017542) #23	STC2 (ENSPTRG00000017543) #24	BOD1 (ENSPTRG00000017544) #25	CPEB4 (ENSPTRG00000017545) #26	C5H5orf47 (ENSPTRG00000017546) #27	NSG2 (ENSPTRG00000017547) #28	MSX2 (ENSPTRG00000017548) #29	ENSPTRG00000048982 #30	DRD1 (ENSPTRG00000049206) #31	SFXN1 (ENSPTRG00000017550) #32	HRH2 (ENSPTRG00000017551) #33	CPLX2 (ENSPTRG00000048326) #34	THOC3 (ENSPTRG00000017594) #35	ENSPTRG00000017556 #36	SIMC1 (ENSPTRG00000017557) #37
Bonobo	MODERN SPECIES	18	FBXW11 (ENSPPAG00000041177) #7	STK10 (ENSPPAG00000017062) #8	ENSPPAG00000041942 #9	EFCAB9 (ENSPPAG00000037845) #10	UBTD2 (ENSPPAG00000040436) #11	SH3PXD2B (ENSPPAG00000028491) #12	ENSPPAG00000014966 #13	ENSPPAG00000030109	DUSP1 (ENSPPAG00000028299) #15	ERGIC1 (ENSPPAG00000030828) #16	ENSPPAG00000036347 #17	RPL26L1 (ENSPPAG00000029664) #18	ENSPPAG00000043282 #19	ATP6V0E1 (ENSPPAG00000037191) #20	CREBRF (ENSPPAG00000039864) #21	BNIP1 (ENSPPAG00000029895) #22	NKX2-5 (ENSPPAG00000031047) #23	STC2 (ENSPPAG00000042436) #24	BOD1 (ENSPPAG00000033401) #25	CPEB4 (ENSPPAG00000030599) #26	C5orf47 (ENSPPAG00000018189) #27	NSG2 (ENSPPAG00000028721) #28	MSX2 (ENSPPAG00000012688) #29	ENSPPAG00000030791	DRD1 (ENSPPAG00000015231) #31	SFXN1 (ENSPPAG00000036199) #32	HRH2 (ENSPPAG00000033874) #33	CPLX2 (ENSPPAG00000038071) #34	THOC3 (ENSPPAG00000006020) #35	SIMC1 (ENSPPAG00000042073) #37	ENSPPAG00000018818
Human	MODERN SPECIES	17	TLX3 (ENSG00000164438)	NPM1 (ENSG00000181163)	FGF18 (ENSG00000156427)	SMIM23 (ENSG00000185662)	FBXW11 (ENSG00000072803) #7	STK10 (ENSG00000072786) #8	EFCAB9 (ENSG00000214360) #10	UBTD2 (ENSG00000168246) #11	SH3PXD2B (ENSG00000174705) #12	NEURL1B (ENSG00000214357) #13	DUSP1 (ENSG00000120129) #15	ERGIC1 (ENSG00000113719) #16	RPL26L1 (ENSG00000037241) #18	ATP6V0E1 (ENSG00000113732) #20	CREBRF (ENSG00000164463) #21	BNIP1 (ENSG00000113734) #22	NKX2-5 (ENSG00000183072) #23	STC2 (ENSG00000113739) #24	BOD1 (ENSG00000145919) #25	CPEB4 (ENSG00000113742) #26	C5orf47 (ENSG00000185056) #27	NSG2 (ENSG00000170091) #28	MSX2 (ENSG00000120149) #29	DRD1 (ENSG00000184845) #31	SFXN1 (ENSG00000164466) #32	HRH2 (ENSG00000113749) #33	CPLX2 (ENSG00000145920) #34	THOC3 (ENSG00000051596) #35	SIMC1 (ENSG00000170085) #37	KIAA1191 (ENSG00000122203)	ARL10 (ENSG00000175414)
Gorilla	MODERN SPECIES	18	FGF18 (ENSGGOG00000007226)	SMIM23 (ENSGGOG00000004301)	FBXW11 (ENSGGOG00000007880) #7	STK10 (ENSGGOG00000012427) #8	EFCAB9 (ENSGGOG00000011373) #10	UBTD2 (ENSGGOG00000043610) #11	SH3PXD2B (ENSGGOG00000008765) #12	ENSGGOG00000004882 #13	DUSP1 (ENSGGOG00000007135) #15	ERGIC1 (ENSGGOG00000008455) #16	ENSGGOG00000044004 #17	RPL26L1 (ENSGGOG00000025582) #18	ENSGGOG00000038246 #19	ATP6V0E1 (ENSGGOG00000006701) #20	CREBRF (ENSGGOG00000011220) #21	BNIP1 (ENSGGOG00000002239) #22	NKX2-5 (ENSGGOG00000017092) #23	STC2 (ENSGGOG00000013736) #24	BOD1 (ENSGGOG00000010925) #25	CPEB4 (ENSGGOG00000010097) #26	C5orf47 (ENSGGOG00000013448) #27	NSG2 (ENSGGOG00000012927) #28	MSX2 (ENSGGOG00000025973) #29	ENSGGOG00000041720	DRD1 (ENSGGOG00000041060) #31	SFXN1 (ENSGGOG00000008195) #32	HRH2 (ENSGGOG00000010675) #33	CPLX2 (ENSGGOG00000039211) #34	ENSGGOG00000038538	SIMC1 (ENSGGOG00000005493) #37	ENSGGOG00000027093
Orangutan	MODERN SPECIES	18	FGF18 (ENSPPYG00000016038)	SMIM23 (ENSPPYG00000016039)	FBXW11 (ENSPPYG00000016040) #7	STK10 (ENSPPYG00000016041) #8	EFCAB9 (ENSPPYG00000016042) #10	UBTD2 (ENSPPYG00000040678) #11	SH3PXD2B (ENSPPYG00000016044) #12	NEURL1B (ENSPPYG00000016046) #13	ENSPPYG00000016047	DUSP1 (ENSPPYG00000016048) #15	ERGIC1 (ENSPPYG00000016049) #16	RPL26L1 (ENSPPYG00000025929) #18	ENSPPYG00000016051 #19	ATP6V0E1 (ENSPPYG00000039284) #20	CREBRF (ENSPPYG00000016053) #21	BNIP1 (ENSPPYG00000016054) #22	ENSPPYG00000039258 #23	STC2 (ENSPPYG00000031955) #24	ENSPPYG00000016057 #25	ENSPPYG00000031520 #26	C5orf47 (ENSPPYG00000016059) #27	NSG2 (ENSPPYG00000016060) #28	ENSPPYG00000038848	MSX2 (ENSPPYG00000016061) #29	DRD1 (ENSPPYG00000016062) #31	SFXN1 (ENSPPYG00000016063) #32	HRH2 (ENSPPYG00000016150) #33	CPLX2 (ENSPPYG00000016064) #34	THOC3 (ENSPPYG00000016066) #35	B4GALT7 (ENSPPYG00000038147)	TMED9 (ENSPPYG00000033004)
Gibbon	MODERN SPECIES	11	NPM1 (ENSNLEG00000000304)	ENSNLEG00000000334	ENSNLEG00000000336	FBXW11 (ENSNLEG00000000338) #7	ENSNLEG00000031400	STK10 (ENSNLEG00000000350) #8	EFCAB9 (ENSNLEG00000000378) #10	UBTD2 (ENSNLEG00000000381) #11	SH3PXD2B (ENSNLEG00000000384) #12	ENSNLEG00000000392 #13	DUSP1 (ENSNLEG00000035887) #15	ENSNLEG00000033458 #17	ERGIC1 (ENSNLEG00000000407) #16	ENSNLEG00000030031 #20	ENSNLEG00000000442 #21	BNIP1 (ENSNLEG00000000453) #22	NKX2-5 (ENSNLEG00000000457) #23	STC2 (ENSNLEG00000000463) #24	BOD1 (ENSNLEG00000000476) #25	CPEB4 (ENSNLEG00000000487) #26	C5orf47 (ENSNLEG00000027778) #27	NSG2 (ENSNLEG00000000522) #28	ENSNLEG00000033959	MSX2 (ENSNLEG00000000548) #29	ENSNLEG00000030116	DRD1 (ENSNLEG00000032546) #31	SFXN1 (ENSNLEG00000000555) #32	HRH2 (ENSNLEG00000000579) #33	CPLX2 (ENSNLEG00000000585) #34	THOC3 (ENSNLEG00000000593) #35	SIMC1 (ENSNLEG00000012464) #37
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00940000159553	ENSGT00620000089286	ENSGT00390000017300	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00910000148172 #9	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b.j #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00910000147916	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a	ENSGT00940000159824.c #29	ENSGT00910000146891	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000159553	ENSGT00620000089286	ENSGT00390000017300	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b.j #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824.c #29	ENSGT00910000146891	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537.f.a
Vervet Monkey	MODERN SPECIES	15	NPM1 (ENSCSAG00000009697)	FGF18 (ENSCSAG00000009667)	ENSCSAG00000009657	SMIM23 (ENSCSAG00000009650)	FBXW11 (ENSCSAG00000009643) #7	STK10 (ENSCSAG00000009634) #8	EFCAB9 (ENSCSAG00000009621) #10	UBTD2 (ENSCSAG00000009612) #11	SH3PXD2B (ENSCSAG00000009606) #12	NEURL1B (ENSCSAG00000009597) #13	DUSP1 (ENSCSAG00000009591) #15	ERGIC1 (ENSCSAG00000009579) #16	ENSCSAG00000009551 ##18	ATP6V0E1 (ENSCSAG00000009548) #20	CREBRF (ENSCSAG00000009545) #21	BNIP1 (ENSCSAG00000009541) #22	NKX2-5 (ENSCSAG00000009533) #23	STC2 (ENSCSAG00000009529) #24	BOD1 (ENSCSAG00000009522) #25	CPEB4 (ENSCSAG00000009516) #26	C5orf47 (ENSCSAG00000009504) #27	NSG2 (ENSCSAG00000009499) #28	MSX2 (ENSCSAG00000009496) #29	ENSCSAG00000019724	DRD1 (ENSCSAG00000009491) #31	SFXN1 (ENSCSAG00000009487) #32	HRH2 (ENSCSAG00000009468) #33	CPLX2 (ENSCSAG00000009460) #34	THOC3 (ENSCSAG00000009454) #35	SIMC1 (ENSCSAG00000009447) #37	KIAA1191 (ENSCSAG00000009441)
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000159553	ENSGT00620000089286	ENSGT00390000017300	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b.j #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00910000147916	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a	ENSGT00940000154276.hb.b	ENSGT00940000159824.c #29	ENSGT00910000146891	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34
Macaca	ANCESTRAL SPECIES	7	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000159553	ENSGT00620000089286	ENSGT00390000017300	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b.i.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00910000147916	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a	ENSGT00940000154276.hb.b	ENSGT00940000159824.c #29	ENSGT00910000146891	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34
Pig-tailed macaque	MODERN SPECIES	566	FGF18 (ENSMNEG00000039895)	ENSMNEG00000044745	SMIM23 (ENSMNEG00000029674)	FBXW11 (ENSMNEG00000033472) #7	STK10 (ENSMNEG00000029184) #8	EFCAB9 (ENSMNEG00000014910) #10	UBTD2 (ENSMNEG00000031278) #11	ENSMNEG00000035122	SH3PXD2B (ENSMNEG00000036165) #12	NEURL1B (ENSMNEG00000044968) #13	DUSP1 (ENSMNEG00000043275) #15	ERGIC1 (ENSMNEG00000031904) #16	RPL26L1 (ENSMNEG00000029899) #18	ATP6V0E1 (ENSMNEG00000036422) #20	CREBRF (ENSMNEG00000032133) #21	BNIP1 (ENSMNEG00000033003) #22	NKX2-5 (ENSMNEG00000016498) #23	STC2 (ENSMNEG00000032109) #24	BOD1 (ENSMNEG00000038516) #25	CPEB4 (ENSMNEG00000034689) #26	C5orf47 (ENSMNEG00000036162) #27	NSG2 (ENSMNEG00000030122) #28	ENSMNEG00000018921	ENSMNEG00000038634	ENSMNEG00000030903	MSX2 (ENSMNEG00000036098) #29	ENSMNEG00000040948	DRD1 (ENSMNEG00000011662) #31	SFXN1 (ENSMNEG00000043255) #32	HRH2 (ENSMNEG00000039778) #33	CPLX2 (ENSMNEG00000017663) #34
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.a.a.a	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000159553	ENSGT00620000089286	ENSGT00390000017300	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT01100000263493.a.b.a.b.b.b.a.a.a.a.b.a	ENSGT00390000005989.a #24	ENSGT00940000154979.s.b.b ##25	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00390000000483.a.a #28	ENSGT00940000159824.c #29	ENSGT00940000155491.d	ENSGT00910000146891	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35
Rhesus	MODERN SPECIES	16	ENSMMUG00000056310	NPM1 (ENSMMUG00000015781)	FGF18 (ENSMMUG00000019401)	SMIM23 (ENSMMUG00000057889)	FBXW11 (ENSMMUG00000016008) #7	STK10 (ENSMMUG00000006811) #8	ENSMMUG00000057388	EFCAB9 (ENSMMUG00000059414) #10	UBTD2 (ENSMMUG00000052139) #11	SH3PXD2B (ENSMMUG00000010102) #12	NEURL1B (ENSMMUG00000008848) #13	DUSP1 (ENSMMUG00000059336) #15	ERGIC1 (ENSMMUG00000003067) #16	ATP6V0E1 (ENSMMUG00000059290) #20	CREBRF (ENSMMUG00000005909) #21	BNIP1 (ENSMMUG00000014607) #22	NKX2-5 (ENSMMUG00000064883) #23	ENSMMUG00000055739	STC2 (ENSMMUG00000014782) #24	ENSMMUG00000054693	BOD1 (ENSMMUG00000013793) #25	CPEB4 (ENSMMUG00000019926) #26	NSG2 (ENSMMUG00000059444) #28	MSX2 (ENSMMUG00000004932) #29	ENSMMUG00000039572	DRD1 (ENSMMUG00000005147) #31	SFXN1 (ENSMMUG00000005148) #32	ENSMMUG00000052819	HRH2 (ENSMMUG00000014245) #33	THOC3 (ENSMMUG00000018737) #35	ENSMMUG00000041279 #36
Crab-eating macaque	MODERN SPECIES	16	FGF18 (ENSMFAG00000064381)	ENSMFAG00000039380	SMIM23 (ENSMFAG00000039057)	FBXW11 (ENSMFAG00000039918) #7	ENSMFAG00000047803	ENSMFAG00000057552 #9	STK10 (ENSMFAG00000033923) #8	ENSMFAG00000051726	EFCAB9 (ENSMFAG00000043157) #10	UBTD2 (ENSMFAG00000052150) #11	SH3PXD2B (ENSMFAG00000040954) #12	DUSP1 (ENSMFAG00000044045) #15	ERGIC1 (ENSMFAG00000037788) #16	ATP6V0E1 (ENSMFAG00000045429) #20	CREBRF (ENSMFAG00000036600) #21	BNIP1 (ENSMFAG00000037018) #22	NKX2-5 (ENSMFAG00000034569) #23	ENSMFAG00000060111	STC2 (ENSMFAG00000048596) #24	ENSMFAG00000003066 ##25	CPEB4 (ENSMFAG00000003075) #26	NSG2 (ENSMFAG00000033258) #28	ENSMFAG00000010780	MSX2 (ENSMFAG00000056450) #29	ENSMFAG00000062346	ENSMFAG00000010945	DRD1 (ENSMFAG00000015744) #31	SFXN1 (ENSMFAG00000040820) #32	HRH2 (ENSMFAG00000032099) #33	CPLX2 (ENSMFAG00000037899) #34	THOC3 (ENSMFAG00000034476) #35
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000159553	ENSGT00620000089286	ENSGT00390000017300	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b.j #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00910000147916	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a	ENSGT00940000154276.hb.b	ENSGT00940000159824.c #29	ENSGT00910000146891	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34
Olive baboon	MODERN SPECIES	15	TLX3 (ENSPANG00000000216)	NPM1 (ENSPANG00000000217)	FGF18 (ENSPANG00000017661)	SMIM23 (ENSPANG00000003366)	FBXW11 (ENSPANG00000006849) #7	STK10 (ENSPANG00000009341) #8	EFCAB9 (ENSPANG00000003762) #10	UBTD2 (ENSPANG00000002422) #11	SH3PXD2B (ENSPANG00000013857) #12	NEURL1B (ENSPANG00000001624) #13	ENSPANG00000049887 #15	ERGIC1 (ENSPANG00000023223) #16	RPL26L1 (ENSPANG00000012204) #18	ENSPANG00000011468 #20	CREBRF (ENSPANG00000013059) #21	BNIP1 (ENSPANG00000003761) #22	NKX2-5 (ENSPANG00000012362) #23	STC2 (ENSPANG00000045597) #24	BOD1 (ENSPANG00000005513) #25	CPEB4 (ENSPANG00000009300) #26	ENSPANG00000019682	ENSPANG00000045766	MSX2 (ENSPANG00000041175) #29	ENSPANG00000045235	ENSPANG00000043119	DRD1 (ENSPANG00000017071) #31	SFXN1 (ENSPANG00000023643) #32	HRH2 (ENSPANG00000019607) #33	CPLX2 (ENSPANG00000023733) #34	THOC3 (ENSPANG00000012114) #35	ENSPANG00000038898 #36
Cercopithecinae_d	ANCESTRAL SPECIES	53	ENSGT00940000153052.c.b.a.a.a.b	ENSGT00940000159553	ENSGT00620000089286	ENSGT00390000017300	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b.j #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a.d #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00910000147916	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a	ENSGT00940000154276.hb.b	ENSGT00940000159824.c #29	ENSGT00910000146891	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34
Sooty mangabey	MODERN SPECIES	597	NPM1 (ENSCATG00000013107)	FGF18 (ENSCATG00000040646)	ENSCATG00000040661	SMIM23 (ENSCATG00000031141)	FBXW11 (ENSCATG00000000142) #7	STK10 (ENSCATG00000036488) #8	EFCAB9 (ENSCATG00000042923) #10	UBTD2 (ENSCATG00000032931) #11	SH3PXD2B (ENSCATG00000043516) #12	NEURL1B (ENSCATG00000038257) #13	DUSP1 (ENSCATG00000027456) #15	ERGIC1 (ENSCATG00000041026) #16	RPL26L1 (ENSCATG00000029601) #18	ATP6V0E1 (ENSCATG00000036579) #20	CREBRF (ENSCATG00000040516) #21	BNIP1 (ENSCATG00000043162) #22	NKX2-5 (ENSCATG00000031410) #23	STC2 (ENSCATG00000030924) #24	ENSCATG00000005639 #25	CPEB4 (ENSCATG00000014550) #26	C5orf47 (ENSCATG00000012564) #27	NSG2 (ENSCATG00000029990) #28	ENSCATG00000011643	ENSCATG00000040643	ENSCATG00000040728	MSX2 (ENSCATG00000022593) #29	ENSCATG00000009773	DRD1 (ENSCATG00000006084) #31	SFXN1 (ENSCATG00000030378) #32	HRH2 (ENSCATG00000045358) #33	CPLX2 (ENSCATG00000044259) #34
Drill	MODERN SPECIES	960	FGF18 (ENSMLEG00000029867)	ENSMLEG00000040662	SMIM23 (ENSMLEG00000042760)	FBXW11 (ENSMLEG00000035049) #7	STK10 (ENSMLEG00000041182) #8	EFCAB9 (ENSMLEG00000038052) #10	UBTD2 (ENSMLEG00000038379) #11	SH3PXD2B (ENSMLEG00000029587) #12	NEURL1B (ENSMLEG00000033205) #13	DUSP1 (ENSMLEG00000039172) #15	ENSMLEG00000040155 #17	ERGIC1 (ENSMLEG00000029804) #16	ENSMLEG00000037483 ##18	ATP6V0E1 (ENSMLEG00000030149) #20	CREBRF (ENSMLEG00000000513) #21	BNIP1 (ENSMLEG00000039126) #22	NKX2-5 (ENSMLEG00000000339) #23	STC2 (ENSMLEG00000026461) #24	ENSMLEG00000030320 ##25
Rhinopithecus	ANCESTRAL SPECIES	118	ENSGT00940000159553	ENSGT00620000089286	ENSGT00390000017300	ENSGT00940000155898.c #7	ENSGT00940000156818 #8	ENSGT00910000148172 #9	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b.i.a #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00910000147916	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.a.a	ENSGT00940000159824.c #29
Black snub-nosed monkey	MODERN SPECIES	1977					STK10 (ENSRBIG00000037834) #8	ENSRBIG00000030762 #9	EFCAB9 (ENSRBIG00000031355) #10	UBTD2 (ENSRBIG00000037359) #11	SH3PXD2B (ENSRBIG00000036914) #12	NEURL1B (ENSRBIG00000037294) #13	DUSP1 (ENSRBIG00000037066) #15	ERGIC1 (ENSRBIG00000032953) #16	RPL26L1 (ENSRBIG00000029430) #18	ATP6V0E1 (ENSRBIG00000000223) #20	CREBRF (ENSRBIG00000041000) #21	BNIP1 (ENSRBIG00000024422) #22	NKX2-5 (ENSRBIG00000007305) #23	STC2 (ENSRBIG00000042135) #24	BOD1 (ENSRBIG00000027366) #25	ENSRBIG00000028275 #26
Golden snub-nosed monkey	MODERN SPECIES	1733	FGF18 (ENSRROG00000044210)	ENSRROG00000031061	SMIM23 (ENSRROG00000037550)	FBXW11 (ENSRROG00000042640) #7	STK10 (ENSRROG00000043810) #8	ENSRROG00000039795 #9	EFCAB9 (ENSRROG00000001287) #10	UBTD2 (ENSRROG00000038688) #11	SH3PXD2B (ENSRROG00000038290) #12	NEURL1B (ENSRROG00000043630) #13	DUSP1 (ENSRROG00000027680) #15	ERGIC1 (ENSRROG00000031072) #16	ENSRROG00000034464 #18	ATP6V0E1 (ENSRROG00000035355) #20	CREBRF (ENSRROG00000041689) #21	BNIP1 (ENSRROG00000035092) #22	NKX2-5 (ENSRROG00000043318) #23	STC2 (ENSRROG00000030679) #24	BOD1 (ENSRROG00000039526) #25	CPEB4 (ENSRROG00000029196) #26	NSG2 (ENSRROG00000032380) #28	C5orf47 (ENSRROG00000008119) #27	ENSRROG00000040238	MSX2 (ENSRROG00000036930) #29
Platyrrhini	ANCESTRAL SPECIES	19	ENSGT00940000153052.c.b.b.b.g.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00900000143489 #17	ENSGT00390000014165.c.b #18	ENSGT00940000156866.s #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537.f	ENSGT00940000160017
Cebidae	ANCESTRAL SPECIES	24	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b.g.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866.s #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537.f	ENSGT00940000160017
Cebidae_a	ANCESTRAL SPECIES	19	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b.g.b.a	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866.s #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979.s.a.a #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537.f	ENSGT00940000160017
Bolivian squirrel monkey	MODERN SPECIES	123	ENSSBOG00000033634	FGF18 (ENSSBOG00000024519)	SMIM23 (ENSSBOG00000018130)	FBXW11 (ENSSBOG00000023046) #7	STK10 (ENSSBOG00000033405) #8	EFCAB9 (ENSSBOG00000019620) #10	UBTD2 (ENSSBOG00000013274) #11	SH3PXD2B (ENSSBOG00000014112) #12	NEURL1B (ENSSBOG00000029939) #13	DUSP1 (ENSSBOG00000027324) #15	ERGIC1 (ENSSBOG00000032967) #16	RPL26L1 (ENSSBOG00000027992) #18	ATP6V0E1 (ENSSBOG00000031772) #20	CREBRF (ENSSBOG00000031151) #21	ENSSBOG00000026680	BNIP1 (ENSSBOG00000029104) #22	NKX2-5 (ENSSBOG00000024121) #23	STC2 (ENSSBOG00000035805) #24	ENSSBOG00000023774 ##25	CPEB4 (ENSSBOG00000002632) #26	C5orf47 (ENSSBOG00000011758) #27	NSG2 (ENSSBOG00000028874) #28	MSX2 (ENSSBOG00000032992) #29	DRD1 (ENSSBOG00000014839) #31	SFXN1 (ENSSBOG00000021468) #32	HRH2 (ENSSBOG00000032885) #33	CPLX2 (ENSSBOG00000031125) #34	THOC3 (ENSSBOG00000022663) #35	SIMC1 (ENSSBOG00000025281) #37	KIAA1191 (ENSSBOG00000026134)	ARL10 (ENSSBOG00000031819)
Capuchin	MODERN SPECIES	91														ENSCCAG00000027575 #21	ENSCCAG00000019031	BNIP1 (ENSCCAG00000034317) #22	NKX2-5 (ENSCCAG00000030136) #23	STC2 (ENSCCAG00000020916) #24	ENSCCAG00000031306 #25	CPEB4 (ENSCCAG00000037039) #26	C5orf47 (ENSCCAG00000038085) #27	ENSCCAG00000036672	NSG2 (ENSCCAG00000024923) #28	MSX2 (ENSCCAG00000037478) #29	ENSCCAG00000036905	AAMP (ENSCCAG00000016105)	PNKD (ENSCCAG00000036713)	TMBIM1 (ENSCCAG00000037987)	CATIP (ENSCCAG00000029357)	SLC11A1 (ENSCCAG00000036035)	CTDSP1 (ENSCCAG00000035606)
Marmoset	MODERN SPECIES	11	FGF18 (ENSCJAG00000019329)	SMIM23 (ENSCJAG00000019324)	FBXW11 (ENSCJAG00000019297) #7	ENSCJAG00000073693	STK10 (ENSCJAG00000019275) #8	ENSCJAG00000069688	ENSCJAG00000069421	EFCAB9 (ENSCJAG00000019273) #10	ENSCJAG00000047953	UBTD2 (ENSCJAG00000046779) #11	SH3PXD2B (ENSCJAG00000019258) #12	NEURL1B (ENSCJAG00000019254) #13	DUSP1 (ENSCJAG00000067622) #15	ERGIC1 (ENSCJAG00000019238) #16	CREBRF (ENSCJAG00000019193) #21	BNIP1 (ENSCJAG00000019186) #22	NKX2-5 (ENSCJAG00000078127) #23	STC2 (ENSCJAG00000054466) #24	ENSCJAG00000045816	ENSCJAG00000031971 #25	CPEB4 (ENSCJAG00000019166) #26	C5orf47 (ENSCJAG00000076312) #27	NSG2 (ENSCJAG00000019152) #28	ENSCJAG00000075851	ENSCJAG00000067799	MSX2 (ENSCJAG00000070729) #29	ENSCJAG00000022277	ENSCJAG00000084066	DRD1 (ENSCJAG00000046402) #31	ENSCJAG00000072817	SFXN1 (ENSCJAG00000005397) #32
Mas night monkey	MODERN SPECIES	610	SMIM23 (ENSANAG00000018501)	ENSANAG00000024342	FBXW11 (ENSANAG00000036790) #7	STK10 (ENSANAG00000027679) #8	EFCAB9 (ENSANAG00000032826) #10	UBTD2 (ENSANAG00000033217) #11	SH3PXD2B (ENSANAG00000014072) #12	NEURL1B (ENSANAG00000038171) #13	DUSP1 (ENSANAG00000027062) #15	ERGIC1 (ENSANAG00000037298) #16	ENSANAG00000033316 #17	RPL26L1 (ENSANAG00000034277) #18	ENSANAG00000025907 #20	CREBRF (ENSANAG00000029119) #21	ENSANAG00000026625	BNIP1 (ENSANAG00000033155) #22	NKX2-5 (ENSANAG00000024360) #23	STC2 (ENSANAG00000031511) #24	BOD1 (ENSANAG00000025713) #25	CPEB4 (ENSANAG00000038371) #26	C5orf47 (ENSANAG00000026045) #27	NSG2 (ENSANAG00000026283) #28	MSX2 (ENSANAG00000019738) #29
Tarsier	MODERN SPECIES	6497												ERGIC1 (ENSTSYG00000001652) #16	RPL26L1 (ENSTSYG00000029140) #18	ENSTSYG00000032150 #20	CREBRF (ENSTSYG00000003978) #21	BNIP1 (ENSTSYG00000004000) #22
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00940000160629	ENSGT00940000153052.c.b.a.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537	ENSGT00940000160017
Bushbaby	MODERN SPECIES	118	ENSOGAG00000013616	FGF18 (ENSOGAG00000013617)	ENSOGAG00000028434	SMIM23 (ENSOGAG00000025446)	FBXW11 (ENSOGAG00000011988) #7	STK10 (ENSOGAG00000011991) #8	EFCAB9 (ENSOGAG00000033621) #10	UBTD2 (ENSOGAG00000011997) #11	SH3PXD2B (ENSOGAG00000012721) #12	NEURL1B (ENSOGAG00000026783) #13	DUSP1 (ENSOGAG00000017064) #15	ERGIC1 (ENSOGAG00000017066) #16	ENSOGAG00000032228	ATP6V0E1 (ENSOGAG00000017071) #20	ENSOGAG00000030210 #21	BNIP1 (ENSOGAG00000007537) #22	NKX2-5 (ENSOGAG00000030259) #23	STC2 (ENSOGAG00000007539) #24	ENSOGAG00000001107 #25	CPEB4 (ENSOGAG00000004243) #26	NSG2 (ENSOGAG00000010238) #28	MSX2 (ENSOGAG00000032139) #29	DRD1 (ENSOGAG00000000909) #31	SFXN1 (ENSOGAG00000016576) #32	HRH2 (ENSOGAG00000030497) #33	CPLX2 (ENSOGAG00000029483) #34	ENSOGAG00000026269	THOC3 (ENSOGAG00000003503) #35	SIMC1 (ENSOGAG00000008279) #37	ENSOGAG00000008281	ARL10 (ENSOGAG00000000826)
Lemuriformes	ANCESTRAL SPECIES	70	ENSGT00940000160629	ENSGT00940000153052.c.b.b.a.a.a	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29
Lemuriformes_a	ANCESTRAL SPECIES	146	ENSGT00940000160629	ENSGT00940000153052.c.b.b.a.a.a	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00390000000483.a.a #28
Greater bamboo lemur	MODERN SPECIES	462												ERGIC1 (ENSPSMG00000016469) #16	RPL26L1 (ENSPSMG00000016402) #18	ENSPSMG00000016373 #20	CREBRF (ENSPSMG00000016349) #21	BNIP1 (ENSPSMG00000016333) #22	NKX2-5 (ENSPSMG00000016306) #23	STC2 (ENSPSMG00000016298) #24
Coquerels sifaka	MODERN SPECIES	428	ENSPCOG00000024038	FGF18 (ENSPCOG00000028662)	SMIM23 (ENSPCOG00000018006)	FBXW11 (ENSPCOG00000017113) #7	STK10 (ENSPCOG00000019111) #8	EFCAB9 (ENSPCOG00000015386) #10	UBTD2 (ENSPCOG00000014867) #11	ENSPCOG00000023430	SH3PXD2B (ENSPCOG00000021760) #12	NEURL1B (ENSPCOG00000025987) #13	DUSP1 (ENSPCOG00000025861) #15	ERGIC1 (ENSPCOG00000014528) #16	RPL26L1 (ENSPCOG00000016409) #18	ATP6V0E1 (ENSPCOG00000022516) #20	CREBRF (ENSPCOG00000024235) #21	BNIP1 (ENSPCOG00000018899) #22	NKX2-5 (ENSPCOG00000019525) #23	STC2 (ENSPCOG00000016688) #24	ENSPCOG00000017551 #25	CPEB4 (ENSPCOG00000004676) #26	NSG2 (ENSPCOG00000019558) #28	SPINK13 (ENSPCOG00000018652)
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	15	ATP10B (ENSMICG00000006366)	GABRB2 (ENSMICG00000015110)	GABRA6 (ENSMICG00000015140)	GABRA1 (ENSMICG00000029169)	GABRG2 (ENSMICG00000012558)	CCNG1 (ENSMICG00000030112)	ENSMICG00000029214	HMMR (ENSMICG00000005137)	MAT2B (ENSMICG00000005155)	NEURL1B (ENSMICG00000037429) #13	DUSP1 (ENSMICG00000031119) #15	ERGIC1 (ENSMICG00000011306) #16	RPL26L1 (ENSMICG00000002762) #18	ATP6V0E1 (ENSMICG00000011317) #20	CREBRF (ENSMICG00000030817) #21	ENSMICG00000017726 #22	ENSMICG00000009130	NKX2-5 (ENSMICG00000017468) #23	STC2 (ENSMICG00000032988) #24	ENSMICG00000035035 #25	CPEB4 (ENSMICG00000029322) #26	C5orf47 (ENSMICG00000047468) #27	NSG2 (ENSMICG00000035993) #28	MSX2 (ENSMICG00000026941) #29	ENSMICG00000028823	PLXND1 (ENSMICG00000008079)	H1-8 (ENSMICG00000030377)	RHO (ENSMICG00000047910)	IFT122 (ENSMICG00000008033)	MBD4 (ENSMICG00000008022)	EFCAB12 (ENSMICG00000008010)
Mouse lemur	MODERN SPECIES	1														SPTLC1 (ENSMICG00000004405)	ROR2 (ENSMICG00000013912)	ENSMICG00000026732 #22	AUH (ENSMICG00000045646)	SYK (ENSMICG00000000066)	DIRAS2 (ENSMICG00000041921)	ENSMICG00000036910	ENSMICG00000029651	GADD45G (ENSMICG00000030733)	SEMA4D (ENSMICG00000001178)	SECISBP2 (ENSMICG00000001176)	CKS2 (ENSMICG00000043815)	SHC3 (ENSMICG00000036874)	NXNL2 (ENSMICG00000045442)	SPIN1 (ENSMICG00000048058)	ENSMICG00000029452	ENSMICG00000011445	PHF2 (ENSMICG00000011463)
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537	ENSGT00940000160017
Tree shrew	MODERN SPECIES	524													ERGIC1 (ENSTBEG00000004802) #16	ATP6V0E1 (ENSTBEG00000005462) #20	CREBRF (ENSTBEG00000005791) #21	BNIP1 (ENSTBEG00000006534) #22
Glires	ANCESTRAL SPECIES	7	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537	ENSGT00940000160017
Lagomorpha	ANCESTRAL SPECIES	32	ENSGT00940000160629	ENSGT00940000153052.c.b.a.a.b.c.a	ENSGT00940000153052.c.b.a.a.b.d	ENSGT00940000159553	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537	ENSGT00940000160017	ENSGT00390000003426
Rabbit	MODERN SPECIES	14	TLX3 (ENSOCUG00000000918)	ENSOCUG00000011117	FGF18 (ENSOCUG00000011124)	FBXW11 (ENSOCUG00000007739) #7	STK10 (ENSOCUG00000005098) #8	EFCAB9 (ENSOCUG00000024250) #10	UBTD2 (ENSOCUG00000005108) #11	ENSOCUG00000034187	SH3PXD2B (ENSOCUG00000006784) #12	NEURL1B (ENSOCUG00000027790) #13	DUSP1 (ENSOCUG00000007999) #15	ERGIC1 (ENSOCUG00000029231) #16	RPL26L1 (ENSOCUG00000006172) #18	ATP6V0E1 (ENSOCUG00000006174) #20	CREBRF (ENSOCUG00000000038) #21	BNIP1 (ENSOCUG00000000040) #22	NKX2-5 (ENSOCUG00000000041) #23	STC2 (ENSOCUG00000007985) #24	ENSOCUG00000014283 #25	CPEB4 (ENSOCUG00000008971) #26	NSG2 (ENSOCUG00000038430) #28	MSX2 (ENSOCUG00000009161) #29	DRD1 (ENSOCUG00000004825) #31	SFXN1 (ENSOCUG00000004827) #32	HRH2 (ENSOCUG00000011627) #33	CPLX2 (ENSOCUG00000025615) #34	THOC3 (ENSOCUG00000016387) #35	SIMC1 (ENSOCUG00000012178) #37	KIAA1191 (ENSOCUG00000012191)	ENSOCUG00000016961	NOP16 (ENSOCUG00000013171)
Pika	MODERN SPECIES	4718											NEURL1B (ENSOPRG00000019143) #13	DUSP1 (ENSOPRG00000000658) #15	ERGIC1 (ENSOPRG00000000665) #16	ATP6V0E1 (ENSOPRG00000000673) #20	CREBRF (ENSOPRG00000000677) #21	BNIP1 (ENSOPRG00000000684) #22	ENSOPRG00000000689 #23
Rodentia	ANCESTRAL SPECIES	7	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537	ENSGT00940000160017
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b.d	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.a.b.b.b.q ##18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000167072	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537
Kangaroo rat	MODERN SPECIES	348											ENSDORG00000015744 #13	Dusp1 (ENSDORG00000023398) #15	Ergic1 (ENSDORG00000005547) #16	Atp6v0e (ENSDORG00000029864) #20	ENSDORG00000025737 #21	Bnip1 (ENSDORG00000023237) #22	Stc2 (ENSDORG00000004431) #24	ENSDORG00000029006	Msx2 (ENSDORG00000008104) #29	Drd1 (ENSDORG00000024953) #31	Sfxn1 (ENSDORG00000007979) #32	Hrh2 (ENSDORG00000029617) #33	Cplx2 (ENSDORG00000007090) #34	Thoc3 (ENSDORG00000014084) #35	ENSDORG00000023760 #37	ENSDORG00000028803	ENSDORG00000023592	Nop16 (ENSDORG00000008872)	Higd2a (ENSDORG00000028196)	Cltb (ENSDORG00000008875)	Faf2 (ENSDORG00000008675)
Myomorpha	ANCESTRAL SPECIES	28	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b.d	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.a.b.b.b.q ##18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	116	Nop16 (ENSJJAG00000017655)	Arl10 (ENSJJAG00000015006)	ENSJJAG00000010486	4833439L19Rik (ENSJJAG00000012444)	ENSJJAG00000013691 #37	Thoc3 (ENSJJAG00000010704) #35	Cplx2 (ENSJJAG00000010083) #34	Hrh2 (ENSJJAG00000021498) #33	ENSJJAG00000011748 #32	Drd1 (ENSJJAG00000014282) #31	Dusp1 (ENSJJAG00000010442) #15	Ergic1 (ENSJJAG00000006842) #16	ENSJJAG00000017961 #20	ENSJJAG00000017400 #21	ENSJJAG00000016719 #21	ENSJJAG00000016444 #22	Nkx2-5 (ENSJJAG00000015156) #23	Stc2 (ENSJJAG00000012335) #24	Bod1 (ENSJJAG00000007832) #25	Cpeb4 (ENSJJAG00000021518) #26	Nsg2 (ENSJJAG00000020822) #28	Msx2 (ENSJJAG00000016806) #29	Neurl1b (ENSJJAG00000016269) #13	Sh3pxd2b (ENSJJAG00000013982) #12	Ubtd2 (ENSJJAG00000010668) #11	Efcab9 (ENSJJAG00000009458) #10	Stk10 (ENSJJAG00000023041) #8	ENSJJAG00000021804 #7	Smim23 (ENSJJAG00000017456)	Fgf18 (ENSJJAG00000016780)	ENSJJAG00000014455
Lesser Egyptian jerboa	MODERN SPECIES	164	ENSJJAG00000021276	ENSJJAG00000020869	ENSJJAG00000012256	ENSJJAG00000012274	Ccdc85a (ENSJJAG00000020531)	Efemp1 (ENSJJAG00000019884)	ENSJJAG00000019708	Pnpt1 (ENSJJAG00000019227)	ENSJJAG00000018316	Ppp4r3b (ENSJJAG00000018078)	Cfap36 (ENSJJAG00000017803)	ENSJJAG00000017442	ENSJJAG00000017280	ENSJJAG00000015446	Prorsd1 (ENSJJAG00000021319)	ENSJJAG00000020305 #22	Mtif2 (ENSJJAG00000017300)	ENSJJAG00000016789	Clhc1 (ENSJJAG00000015620)	ENSJJAG00000015191	ENSJJAG00000015093	Eml6 (ENSJJAG00000000895)	Sptbn1 (ENSJJAG00000018403)	4930505A04Rik (ENSJJAG00000016821)	ENSJJAG00000014424
Muroidea	ANCESTRAL SPECIES	10	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b.d	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.a.b.b.b.q ##18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00510000049125	ENSGT00550000075071	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000154590	ENSGT00940000162598
Upper Galilee mountains blind mole rat	MODERN SPECIES	1546	Tlx3 (ENSNGAG00000011712)	ENSNGAG00000016679	Fgf18 (ENSNGAG00000001054)	Smim23 (ENSNGAG00000001372)	Fbxw11 (ENSNGAG00000006880) #7	Stk10 (ENSNGAG00000019942) #8	Efcab9 (ENSNGAG00000019506) #10	Ubtd2 (ENSNGAG00000000104) #11	Sh3pxd2b (ENSNGAG00000000827) #12	Neurl1b (ENSNGAG00000018472) #13	Dusp1 (ENSNGAG00000019520) #15	Ergic1 (ENSNGAG00000020608) #16	ENSNGAG00000002828 ##18	ENSNGAG00000003294 #20	ENSNGAG00000009349 #21	Bnip1 (ENSNGAG00000019475) #22	Nkx2-5 (ENSNGAG00000016164) #23	Stc2 (ENSNGAG00000016574) #24	ENSNGAG00000003484	Bod1 (ENSNGAG00000006127) #25	Cpeb4 (ENSNGAG00000010735) #26	4930524B15Rik (ENSNGAG00000012324) #27	Nsg2 (ENSNGAG00000013688) #28	Il9r (ENSNGAG00000020208)	Polr3k (ENSNGAG00000016438)	Snrnp25 (ENSNGAG00000016910)	Rhbdf1 (ENSNGAG00000017730)	Mpg (ENSNGAG00000020949)	Nprl3 (ENSNGAG00000003135)	Hba-x (ENSNGAG00000013746)	ENSNGAG00000014020
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000153139.B.b	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b.d	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000154590	ENSGT00940000162598	ENSGT00950000183213.a.a.b
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000153139.B.b	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b.d.d.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000154590	ENSGT00940000162598	ENSGT00950000183213.a.a.b
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000153139.B.b	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b.d.d.b.a	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000154590	ENSGT00940000162598	ENSGT00950000183213.a.a.b
Northern American deer mouse	MODERN SPECIES	21	ENSPEMG00000010032	Fgf18 (ENSPEMG00000027707)	ENSPEMG00000005862	Smim23 (ENSPEMG00000009648)	Fbxw11 (ENSPEMG00000014614) #7	Stk10 (ENSPEMG00000016749) #8	Efcab9 (ENSPEMG00000012516) #10	Ubtd2 (ENSPEMG00000028774) #11	Sh3pxd2b (ENSPEMG00000011209) #12	Neurl1b (ENSPEMG00000018647) #13	Dusp1 (ENSPEMG00000008974) #15	ENSPEMG00000029256	Ergic1 (ENSPEMG00000011371) #16	Atp6v0e (ENSPEMG00000016171) #20	Crebrf (ENSPEMG00000019136) #21	Bnip1 (ENSPEMG00000014579) #22	Nkx2-5 (ENSPEMG00000012263) #23	Stc2 (ENSPEMG00000031170) #24	ENSPEMG00000030821 #25	Cpeb4 (ENSPEMG00000025728) #26	4930524B15Rik (ENSPEMG00000016302) #27	Nsg2 (ENSPEMG00000029190) #28	Il9r (ENSPEMG00000015108)	Snrnp25 (ENSPEMG00000000454)	ENSPEMG00000025652	Mpg (ENSPEMG00000013129)	Nprl3 (ENSPEMG00000018260)	Hba-x (ENSPEMG00000011750)	ENSPEMG00000030709	ENSPEMG00000029677	ENSPEMG00000027669
Prairie vole	MODERN SPECIES	15											Neurl1b (ENSMOCG00000019556) #13	Dusp1 (ENSMOCG00000022124) #15	Ergic1 (ENSMOCG00000014403) #16	Atp6v0e (ENSMOCG00000003266) #20	ENSMOCG00000004676 #21	Bnip1 (ENSMOCG00000003864) #22	Nkx2-5 (ENSMOCG00000018760) #23	Stc2 (ENSMOCG00000008034) #24	Bod1 (ENSMOCG00000010082) #25	Cpeb4 (ENSMOCG00000022941) #26	Nsg2 (ENSMOCG00000013492) #28	Il9r (ENSMOCG00000015710)	Snrnp25 (ENSMOCG00000014142)	Rhbdf1 (ENSMOCG00000016377)	Mpg (ENSMOCG00000003994)	Nprl3 (ENSMOCG00000019243)	Hba-x (ENSMOCG00000014714)	ENSMOCG00000018254	ENSMOCG00000022598	ENSMOCG00000016063	ENSMOCG00000011391
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000153139.B.b	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b.d.d.a.a.a	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00390000000483.a.a #28	ENSGT00640000091672 #27	ENSGT00940000167072	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000162598	ENSGT00940000154590
Chinese hamster chok1gshd	MODERN SPECIES	229	Ranbp17 (ENSCGRG00001015450)	Tlx3 (ENSCGRG00001015510)	ENSCGRG00001001985	Fgf18 (ENSCGRG00001017188)	Smim23 (ENSCGRG00001015541)	Fbxw11 (ENSCGRG00001016029) #7	Stk10 (ENSCGRG00001013751) #8	Efcab9 (ENSCGRG00001001253) #10	Ubtd2 (ENSCGRG00001022026) #11	Sh3pxd2b (ENSCGRG00001010764) #12	Neurl1b (ENSCGRG00001022855) #13	Dusp1 (ENSCGRG00001019246) #15	Ergic1 (ENSCGRG00001024104) #16	Atp6v0e (ENSCGRG00001022946) #20	Crebrf (ENSCGRG00001007231) #21	Bnip1 (ENSCGRG00001000805) #22	Nkx2-5 (ENSCGRG00001024735) #23	Stc2 (ENSCGRG00001023337) #24	Bod1 (ENSCGRG00001023221) #25	Cpeb4 (ENSCGRG00001021805) #26	ENSCGRG00001019946	4930524B15Rik (ENSCGRG00001017897) #27	ENSCGRG00001013841	Nsg2 (ENSCGRG00001010888) #28	Il9r (ENSCGRG00001023103)	Snrnp25 (ENSCGRG00001020306)	Rhbdf1 (ENSCGRG00001001539)	Mpg (ENSCGRG00001016501)	Nprl3 (ENSCGRG00001009894)	Hba-x (ENSCGRG00001024784)	ENSCGRG00001024697
Golden Hamster	MODERN SPECIES	861								Efcab9 (ENSMAUG00000012647) #10	Ubtd2 (ENSMAUG00000000209) #11	ENSMAUG00000001948 #12	Neurl1b (ENSMAUG00000009175) #13	Dusp1 (ENSMAUG00000008804) #15	Ergic1 (ENSMAUG00000019097) #16	Atp6v0e (ENSMAUG00000013929) #20	Crebrf (ENSMAUG00000016495) #21	Bnip1 (ENSMAUG00000016525) #22	Nkx2-5 (ENSMAUG00000007694) #23	Stc2 (ENSMAUG00000008254) #24
Murinae	ANCESTRAL SPECIES	7	ENSGT00940000153139.B.b	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b.d.b.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00510000049125	ENSGT00390000002628	ENSGT00940000156278	ENSGT00390000009825	ENSGT00390000015916	ENSGT00940000158623	ENSGT00940000154590	ENSGT00940000162598	ENSGT00950000183213.a.a.b
Rat	MODERN SPECIES	1	Tlx3 (ENSRNOG00000004976)	Npm1 (ENSRNOG00000004616)	Fgf18 (ENSRNOG00000048389)	Smim23 (ENSRNOG00000027196)	Fbxw11 (ENSRNOG00000004395) #7	ENSRNOG00000066039	Stk10 (ENSRNOG00000004217) #8	Efcab9 (ENSRNOG00000004142) #10	Ubtd2 (ENSRNOG00000004137) #11	Sh3pxd2b (ENSRNOG00000004063) #12	Neurl1b (ENSRNOG00000027606) #13	ENSRNOG00000069024 #15	Ergic1 (ENSRNOG00000003508) #16	Atp6v0e1 (ENSRNOG00000003269) #20	Crebrf (ENSRNOG00000020769) #21	Bnip1 (ENSRNOG00000020753) #22	Nkx2-5 (ENSRNOG00000020747) #23	Stc2 (ENSRNOG00000020729) #24	Bod1 (ENSRNOG00000020717) #25	Cpeb4 (ENSRNOG00000033169) #26	RGD1311343 (ENSRNOG00000027852) #27	Nsg2 (ENSRNOG00000020644) #28	Il9r (ENSRNOG00000020630)	Snrnp25 (ENSRNOG00000020626)	Rhbdf1 (ENSRNOG00000020594)	Mpg (ENSRNOG00000020571)	Nprl3 (ENSRNOG00000020541)	Hbz (ENSRNOG00000020536)	Hba-a3 (ENSRNOG00000047321)	ENSRNOG00000070249	Hba-a1 (ENSRNOG00000029886)
Mus	ANCESTRAL SPECIES	21	ENSGT00940000153801.a	ENSGT00940000160286	ENSGT00940000160060	ENSGT00390000017359	ENSGT00940000156947	ENSGT00940000161859	ENSGT00390000006233.c.a.a	ENSGT00940000160198	ENSGT00530000063694.a	ENSGT00950000183213.a.a.b	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00940000161735	ENSGT00950000183180.a.b	ENSGT00390000017030.b.b	ENSGT00940000158438	ENSGT00940000162408	ENSGT01090000260100.A	ENSGT00390000006663	ENSGT00940000157078	ENSGT00510000048041	ENSGT00940000160887	ENSGT00940000160955	ENSGT01030000234648.a.b.a.a.a	ENSGT00730000111329	ENSGT00410000025882.b
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000153801.a	ENSGT00940000160286	ENSGT00940000160060	ENSGT00390000017359	ENSGT00940000156947	ENSGT00940000161859	ENSGT00390000006233.c.a.a	ENSGT00940000160198	ENSGT00530000063694.a	ENSGT00950000183213.a.a.b	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00940000161735.k	ENSGT00950000183180.a.b	ENSGT00390000017030.b.b	ENSGT00940000158438	ENSGT00940000162408	ENSGT01090000260100.A	ENSGT00390000006663	ENSGT00940000157078	ENSGT00510000048041	ENSGT00940000160887	ENSGT00940000160955	ENSGT01030000234648.a.b.a.a.a	ENSGT00730000111329	ENSGT00410000025882.b
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000153801.a	ENSGT00940000160286	ENSGT00940000160060	ENSGT00390000017359	ENSGT00940000156947	ENSGT00940000161859	ENSGT00390000006233.c.a.a	ENSGT00940000160198	ENSGT00530000063694.a	ENSGT00950000183213.a.a.b	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00940000161735.k	ENSGT00950000183180.a.b	ENSGT00390000017030.b.b	ENSGT00940000158438	ENSGT00940000162408	ENSGT01090000260100.A	ENSGT00390000006663	ENSGT00940000157078	ENSGT00510000048041	ENSGT00940000160887	ENSGT00940000160955	ENSGT01030000234648.a.b.a.a.a	ENSGT00730000111329	ENSGT00410000025882.b
Mouse	MODERN SPECIES	8	Decr2 (ENSMUSG00000036775)	Nme4 (ENSMUSG00000024177)	Pgap6 (ENSMUSG00000024180)	Mrpl28 (ENSMUSG00000024181)	Axin1 (ENSMUSG00000024182)	Pdia2 (ENSMUSG00000024184)	Arhgdig (ENSMUSG00000073433)	Rgs11 (ENSMUSG00000024186)	Fam234a (ENSMUSG00000024187)	Luc7l (ENSMUSG00000024188)	Neurl1b (ENSMUSG00000034413) #13	Dusp1 (ENSMUSG00000024190) #15	Ergic1 (ENSMUSG00000001576) #16	Atp6v0e (ENSMUSG00000015575) #20	Crebrf (ENSMUSG00000048249) #21	Bnip1 (ENSMUSG00000024191) #22	Nkx2-5 (ENSMUSG00000015579) #23	Kifc5b (ENSMUSG00000024301)	Phf1 (ENSMUSG00000024193)	Cuta (ENSMUSG00000024194)	Syngap1 (ENSMUSG00000067629)	Zbtb9 (ENSMUSG00000079605)	Ggnbp1 (ENSMUSG00000048731)	Bak1 (ENSMUSG00000057789)	Itpr3 (ENSMUSG00000042644)	Uqcc2 (ENSMUSG00000024208)	Ip6k3 (ENSMUSG00000024210)	Lemd2 (ENSMUSG00000044857)	Grm4 (ENSMUSG00000063239)	Hmga1 (ENSMUSG00000046711)	Smim29 (ENSMUSG00000062753)
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000153801.a	ENSGT00940000160286	ENSGT00940000160060	ENSGT00390000017359	ENSGT00940000156947	ENSGT00940000161859	ENSGT00390000006233.c.a.a	ENSGT00940000160198	ENSGT00530000063694.a	ENSGT00950000183213.a.a.b	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00940000161735.k	ENSGT00950000183180.a.b	ENSGT00390000017030.b.b	ENSGT00940000158438	ENSGT00940000162408	ENSGT01090000260100.A	ENSGT00390000006663	ENSGT00940000157078	ENSGT00510000048041	ENSGT00940000160887	ENSGT00940000160955	ENSGT01030000234648.a.b.a.a.a	ENSGT00730000111329	ENSGT00410000025882.b
spretus	MODERN SPECIES	8	Pgap6 (MGP_SPRETEiJ_G0022183)	Mrpl28 (MGP_SPRETEiJ_G0022184)	Axin1 (MGP_SPRETEiJ_G0022185)	Pdia2 (MGP_SPRETEiJ_G0022186)	Arhgdig (MGP_SPRETEiJ_G0022187)	Rgs11 (MGP_SPRETEiJ_G0022188)	Fam234a (MGP_SPRETEiJ_G0022189)	Luc7l (MGP_SPRETEiJ_G0022190)	MGP_SPRETEiJ_G0022191	MGP_SPRETEiJ_G0022192	Neurl1b (MGP_SPRETEiJ_G0022193) #13	Dusp1 (MGP_SPRETEiJ_G0022194) #15	Ergic1 (MGP_SPRETEiJ_G0022195) #16	MGP_SPRETEiJ_G0022196 #20	Crebrf (MGP_SPRETEiJ_G0022197) #21	Bnip1 (MGP_SPRETEiJ_G0022198) #22	Nkx2-5 (MGP_SPRETEiJ_G0022199) #23	MGP_SPRETEiJ_G0022200	MGP_SPRETEiJ_G0022201	Phf1 (MGP_SPRETEiJ_G0022202)	Cuta (MGP_SPRETEiJ_G0022203)	Syngap1 (MGP_SPRETEiJ_G0022204)	Zbtb9 (MGP_SPRETEiJ_G0022205)	Ggnbp1 (MGP_SPRETEiJ_G0022206)	Bak1 (MGP_SPRETEiJ_G0022207)	Itpr3 (MGP_SPRETEiJ_G0022208)	Uqcc2 (MGP_SPRETEiJ_G0022209)	Ip6k3 (MGP_SPRETEiJ_G0022210)	Lemd2 (MGP_SPRETEiJ_G0022211)	Grm4 (MGP_SPRETEiJ_G0022212)	MGP_SPRETEiJ_G0022213
Steppe mouse	MODERN SPECIES	2698	Mrpl28 (ENSMSIG00000023867)	Axin1 (ENSMSIG00000023878)	Arhgdig (ENSMSIG00000023904)	Pdia2 (ENSMSIG00000023925)	Rgs11 (ENSMSIG00000023974)	Fam234a (ENSMSIG00000024174)	Luc7l (ENSMSIG00000024237)	ENSMSIG00000024264	Neurl1b (ENSMSIG00000025549) #13	ENSMSIG00000025563	Dusp1 (ENSMSIG00000025579) #15	ENSMSIG00000025591	Ergic1 (ENSMSIG00000025604) #16	ENSMSIG00000025620 #20	Crebrf (ENSMSIG00000025640) #21	Bnip1 (ENSMSIG00000025666) #22	Nkx2-5 (ENSMSIG00000025708) #23
Ryukyu mouse	MODERN SPECIES	8	MGP_CAROLIEiJ_G0021270	Nme4 (MGP_CAROLIEiJ_G0021271)	Pgap6 (MGP_CAROLIEiJ_G0021272)	Mrpl28 (MGP_CAROLIEiJ_G0021273)	Axin1 (MGP_CAROLIEiJ_G0021274)	Pdia2 (MGP_CAROLIEiJ_G0021275)	Arhgdig (MGP_CAROLIEiJ_G0021276)	Rgs11 (MGP_CAROLIEiJ_G0021277)	Fam234a (MGP_CAROLIEiJ_G0021278)	Luc7l (MGP_CAROLIEiJ_G0021279)	Neurl1b (MGP_CAROLIEiJ_G0021280) #13	Dusp1 (MGP_CAROLIEiJ_G0021281) #15	Ergic1 (MGP_CAROLIEiJ_G0021282) #16	MGP_CAROLIEiJ_G0021283 #20	Crebrf (MGP_CAROLIEiJ_G0021284) #21	Bnip1 (MGP_CAROLIEiJ_G0021285) #22	Nkx2-5 (MGP_CAROLIEiJ_G0021286) #23	MGP_CAROLIEiJ_G0021287	Phf1 (MGP_CAROLIEiJ_G0021289)	Cuta (MGP_CAROLIEiJ_G0021290)	Syngap1 (MGP_CAROLIEiJ_G0021291)	Zbtb9 (MGP_CAROLIEiJ_G0021292)	Ggnbp1 (MGP_CAROLIEiJ_G0021293)	Bak1 (MGP_CAROLIEiJ_G0021294)	Itpr3 (MGP_CAROLIEiJ_G0021295)	Uqcc2 (MGP_CAROLIEiJ_G0021296)	Ip6k3 (MGP_CAROLIEiJ_G0021297)	Lemd2 (MGP_CAROLIEiJ_G0021298)	Grm4 (MGP_CAROLIEiJ_G0021299)	MGP_CAROLIEiJ_G0021300	MGP_CAROLIEiJ_G0021301
Shrew mouse	MODERN SPECIES	13	MGP_PahariEiJ_G0023588	Nme4 (MGP_PahariEiJ_G0023589)	Pgap6 (MGP_PahariEiJ_G0023590)	Mrpl28 (MGP_PahariEiJ_G0023591)	Axin1 (MGP_PahariEiJ_G0023592)	Pdia2 (MGP_PahariEiJ_G0023593)	Arhgdig (MGP_PahariEiJ_G0023594)	Rgs11 (MGP_PahariEiJ_G0023595)	MGP_PahariEiJ_G0023596	Luc7l (MGP_PahariEiJ_G0023597)	Neurl1b (MGP_PahariEiJ_G0023598) #13	Dusp1 (MGP_PahariEiJ_G0023599) #15	Ergic1 (MGP_PahariEiJ_G0023600) #16	MGP_PahariEiJ_G0023601 #20	Crebrf (MGP_PahariEiJ_G0023602) #21	Bnip1 (MGP_PahariEiJ_G0023603) #22	Nkx2-5 (MGP_PahariEiJ_G0023604) #23	MGP_PahariEiJ_G0023606	MGP_PahariEiJ_G0023605	Phf1 (MGP_PahariEiJ_G0023607)	Cuta (MGP_PahariEiJ_G0023608)	Syngap1 (MGP_PahariEiJ_G0023609)	Zbtb9 (MGP_PahariEiJ_G0023610)	Ggnbp1 (MGP_PahariEiJ_G0023611)	Bak1 (MGP_PahariEiJ_G0023612)	Itpr3 (MGP_PahariEiJ_G0023613)	Uqcc2 (MGP_PahariEiJ_G0023614)	Ip6k3 (MGP_PahariEiJ_G0023615)	Lemd2 (MGP_PahariEiJ_G0023616)	Grm4 (MGP_PahariEiJ_G0023617)	MGP_PahariEiJ_G0023618
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b #37	ENSGT00390000000537	ENSGT00940000160017
Hystricomorpha	ANCESTRAL SPECIES	30	ENSGT00940000160629	ENSGT00940000153052.c.b.a.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b.e #37	ENSGT00390000000537	ENSGT00940000160017	ENSGT00390000003426
Hystricomorpha_a	ANCESTRAL SPECIES	28	ENSGT00940000160629	ENSGT00940000153052.c.b.a.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b.e #37	ENSGT00390000000537	ENSGT00940000160017	ENSGT00390000003426
Guinea pig	MODERN SPECIES	17	ENSCPOG00000032195	TLX3 (ENSCPOG00000024190)	FGF18 (ENSCPOG00000006088)	SMIM23 (ENSCPOG00000006672)	FBXW11 (ENSCPOG00000009582) #7	STK10 (ENSCPOG00000006502) #8	EFCAB9 (ENSCPOG00000026758) #10	UBTD2 (ENSCPOG00000034425) #11	SH3PXD2B (ENSCPOG00000039072) #12	NEURL1B (ENSCPOG00000040777) #13	DUSP1 (ENSCPOG00000013344) #15	ERGIC1 (ENSCPOG00000012183) #16	RPL26L1 (ENSCPOG00000012188) #18	ATP6V0E1 (ENSCPOG00000040227) #20	CREBRF (ENSCPOG00000014384) #21	BNIP1 (ENSCPOG00000006752) #22	NKX2-5 (ENSCPOG00000026347) #23	STC2 (ENSCPOG00000034039) #24	ENSCPOG00000026033 #25	CPEB4 (ENSCPOG00000015530) #26	NSG2 (ENSCPOG00000037038) #28	MSX2 (ENSCPOG00000038944) #29	DRD1 (ENSCPOG00000039492) #31	SFXN1 (ENSCPOG00000010321) #32	HRH2 (ENSCPOG00000003473) #33	CPLX2 (ENSCPOG00000033149) #34	THOC3 (ENSCPOG00000025805) #35	ENSCPOG00000023337 #37	KIAA1191 (ENSCPOG00000039242)	ARL10 (ENSCPOG00000001642)	NOP16 (ENSCPOG00000026072)
Hystricomorpha_b	ANCESTRAL SPECIES	19	ENSGT00940000160629	ENSGT00940000153052.c.b.a.b	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00950000182938.a #34	ENSGT00940000158129 #35	ENSGT00940000153451.a.a.b.e #37	ENSGT00390000000537	ENSGT00940000160017	ENSGT00390000003426
Long-tailed chinchilla	MODERN SPECIES	115	TLX3 (ENSCLAG00000013094)	ENSCLAG00000014392	FGF18 (ENSCLAG00000013051)	SMIM23 (ENSCLAG00000012177)	FBXW11 (ENSCLAG00000013691) #7	STK10 (ENSCLAG00000015147) #8	EFCAB9 (ENSCLAG00000013040) #10	UBTD2 (ENSCLAG00000015134) #11	SH3PXD2B (ENSCLAG00000015389) #12	NEURL1B (ENSCLAG00000014210) #13	DUSP1 (ENSCLAG00000013473) #15	ERGIC1 (ENSCLAG00000014304) #16	RPL26L1 (ENSCLAG00000014524) #18	ATP6V0E1 (ENSCLAG00000014664) #20	CREBRF (ENSCLAG00000014588) #21	BNIP1 (ENSCLAG00000015919) #22	NKX2-5 (ENSCLAG00000013992) #23	STC2 (ENSCLAG00000013045) #24	ENSCLAG00000014408	ENSCLAG00000016125 #25	CPEB4 (ENSCLAG00000013156) #26	NSG2 (ENSCLAG00000014316) #28	MSX2 (ENSCLAG00000014001) #29	DRD1 (ENSCLAG00000014757) #31	SFXN1 (ENSCLAG00000016110) #32	HRH2 (ENSCLAG00000015189) #33	CPLX2 (ENSCLAG00000013505) #34	THOC3 (ENSCLAG00000015924) #35	ENSCLAG00000014990	ENSCLAG00000013733 #37	KIAA1191 (ENSCLAG00000013315)
Degu	MODERN SPECIES	253				SMIM23 (ENSODEG00000001818)	FBXW11 (ENSODEG00000001754) #7	STK10 (ENSODEG00000001477) #8	EFCAB9 (ENSODEG00000001416) #10	UBTD2 (ENSODEG00000001390) #11	SH3PXD2B (ENSODEG00000001294) #12	ENSODEG00000001166	NEURL1B (ENSODEG00000001134) #13	DUSP1 (ENSODEG00000001126) #15	ERGIC1 (ENSODEG00000001101) #16	ATP6V0E1 (ENSODEG00000001083) #20	CREBRF (ENSODEG00000002364) #21	BNIP1 (ENSODEG00000002196) #22	NKX2-5 (ENSODEG00000002184) #23	STC2 (ENSODEG00000002102) #24	ENSODEG00000018739	ENSODEG00000002042	ENSODEG00000001973 #25	CPEB4 (ENSODEG00000001934) #26	NSG2 (ENSODEG00000001862) #28	MSX2 (ENSODEG00000001847) #29
Naked mole-rat female	MODERN SPECIES	23	SMIM23 (ENSHGLG00000009367)	ENSHGLG00000032517	FBXW11 (ENSHGLG00000010874) #7	ENSHGLG00000048340	STK10 (ENSHGLG00000007426) #8	EFCAB9 (ENSHGLG00000006358) #10	UBTD2 (ENSHGLG00000044520) #11	SH3PXD2B (ENSHGLG00000009542) #12	NEURL1B (ENSHGLG00000039883) #13	DUSP1 (ENSHGLG00000012633) #15	ERGIC1 (ENSHGLG00000050911) #16	ENSHGLG00000017100	ENSHGLG00000018219 #20	ENSHGLG00000021190	ENSHGLG00000017817 #21	BNIP1 (ENSHGLG00000018031) #22	NKX2-5 (ENSHGLG00000017269) #23	STC2 (ENSHGLG00000017592) #24	ENSHGLG00000041881 #25	CPEB4 (ENSHGLG00000008897) #26	C5orf47 (ENSHGLG00000040572) #27	ENSHGLG00000049916	ENSHGLG00000041184	NSG2 (ENSHGLG00000006062) #28	MSX2 (ENSHGLG00000017569) #29	ENSHGLG00000049074	ENSHGLG00000036934	DRD1 (ENSHGLG00000016781) #31	SFXN1 (ENSHGLG00000045847) #32	HRH2 (ENSHGLG00000018733) #33	CPLX2 (ENSHGLG00000033963) #34
Sciuridae	ANCESTRAL SPECIES	33	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b.b.a	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00940000161175	ENSGT01100000263521.a.a.b.a.b.b	ENSGT00390000018500.a	ENSGT00570000079564	ENSGT00940000162246
Marmotini	ANCESTRAL SPECIES	38	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b.b.a	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00940000161175	ENSGT01100000263521.a.a.b.a.b.b	ENSGT00390000018500.a	ENSGT01090000259995.b.b.b	ENSGT00940000162246
Marmotini_b	ANCESTRAL SPECIES	127	ENSGT00940000160629	ENSGT00940000153052.c.b.b.b.b.a	ENSGT00940000159553	ENSGT00390000017300	ENSGT00940000155898 #7	ENSGT00940000156818 #8	ENSGT00390000007501 #10	ENSGT00940000156641 #11	ENSGT00940000158396 #12	ENSGT00940000157079.a #13	ENSGT00940000159044 #15	ENSGT00530000063113.C #16	ENSGT00390000014165.c.b #18	ENSGT00940000156866 #20	ENSGT00390000007125.b #21	ENSGT00390000014412 #22	ENSGT00940000158996 #23	ENSGT00390000005989.a #24	ENSGT00940000154979 #25	ENSGT00940000154998.a.a #26	ENSGT00640000091672 #27	ENSGT00390000000483.a.a #28	ENSGT00940000159824 #29	ENSGT00940000155857 #31	ENSGT01030000234641.b.a.b.a.b #32	ENSGT00940000158761 #33	ENSGT00940000161175	ENSGT01100000263521.a.a.b.a.b.b	ENSGT00390000018500.a	ENSGT00390000010671	ENSGT01090000259995.a.a.a
Arctic ground squirrel	MODERN SPECIES	242	RANBP17 (ENSUPAG00010022169)	TLX3 (ENSUPAG00010022175)	NPM1 (ENSUPAG00010022177)	FGF18 (ENSUPAG00010022179)	SMIM23 (ENSUPAG00010022182)	ENSUPAG00010022184 #7	STK10 (ENSUPAG00010022207) #8	EFCAB9 (ENSUPAG00010022210) #10	UBTD2 (ENSUPAG00010022213) #11	SH3PXD2B (ENSUPAG00010022216) #12	NEURL1B (ENSUPAG00010022219) #13	ERGIC1 (ENSUPAG00010022238) #16	RPL26L1 (ENSUPAG00010022239) #18	ATP6V0E1 (ENSUPAG00010022244) #20	CREBRF (ENSUPAG00010022247) #21	BNIP1 (ENSUPAG00010022250) #22	NKX2-5 (ENSUPAG00010022252) #23	STC2 (ENSUPAG00010022254) #24
Squirrel	MODERN SPECIES	209	TLX3 (ENSSTOG00000026927)	ENSSTOG00000014732	FGF18 (ENSSTOG00000023666)	SMIM23 (ENSSTOG00000024706)	FBXW11 (ENSSTOG00000023506) #7	STK10 (ENSSTOG00000026208) #8	EFCAB9 (ENSSTOG00000020218) #10	UBTD2 (ENSSTOG00000014298) #11	SH3PXD2B (ENSSTOG00000028124) #12	NEURL1B (ENSSTOG00000025420) #13	DUSP1 (ENSSTOG00000023698) #15	ERGIC1 (ENSSTOG00000025246) #16	RPL26L1 (ENSSTOG00000026876) #18	ATP6V0E1 (ENSSTOG00000025255) #20	CREBRF (ENSSTOG00000004368) #21	BNIP1 (ENSSTOG00000004393) #22	NKX2-5 (ENSSTOG00000004407) #23	STC2 (ENSSTOG00000004413) #24	ENSSTOG00000030887 #25	CPEB4 (ENSSTOG00000020645) #26	NSG2 (ENSSTOG00000011148) #28	MSX2 (ENSSTOG00000000399) #29	DRD1 (ENSSTOG00000029229) #31	SFXN1 (ENSSTOG00000028251) #32	HRH2 (ENSSTOG00000007422) #33	ZNF692 (ENSSTOG00000023210)	ENSSTOG00000027630	SH3BP5L (ENSSTOG00000022558)	ENSSTOG00000026307	ENSSTOG00000034328	ENSSTOG00000027395
Alpin marmot	MODERN SPECIES	31	RANBP17 (ENSMMMG00000010468)	TLX3 (ENSMMMG00000010459)	ENSMMMG00000010435	ENSMMMG00000010418	SMIM23 (ENSMMMG00000010399)	FBXW11 (ENSMMMG00000010309) #7	STK10 (ENSMMMG00000010286) #8	ENSMMMG00000010272 #10	UBTD2 (ENSMMMG00000010264) #11	SH3PXD2B (ENSMMMG00000010235) #12	NEURL1B (ENSMMMG00000010222) #13	ENSMMMG00000010217 #15	ERGIC1 (ENSMMMG00000010202) #16	RPL26L1 (ENSMMMG00000010196) #18	CREBRF (ENSMMMG00000010165) #21	BNIP1 (ENSMMMG00000010131) #22	NKX2-5 (ENSMMMG00000010122) #23	STC2 (ENSMMMG00000010105) #24	ENSMMMG00000010091 #25	CPEB4 (ENSMMMG00000010044) #26	NSG2 (ENSMMMG00000009989) #28	MSX2 (ENSMMMG00000009968) #29	DRD1 (ENSMMMG00000009915) #31	SFXN1 (ENSMMMG00000009889) #32	HRH2 (ENSMMMG00000009886) #33	ZNF692 (ENSMMMG00000009869)	ENSMMMG00000009866	SH3BP5L (ENSMMMG00000009857)	OR2AJ1 (ENSMMMG00000009826)	ENSMMMG00000009785	ENSMMMG00000009765
Eurasian red squirrel	MODERN SPECIES	15	RANBP17 (ENSSVLG00005015018)	TLX3 (ENSSVLG00005014955)	ENSSVLG00005014590	FGF18 (ENSSVLG00005014519)	FBXW11 (ENSSVLG00005014207) #7	STK10 (ENSSVLG00005014068) #8	EFCAB9 (ENSSVLG00005013993) #10	UBTD2 (ENSSVLG00005013934) #11	SH3PXD2B (ENSSVLG00005013894) #12	NEURL1B (ENSSVLG00005013785) #13	DUSP1 (ENSSVLG00005013587) #15	ERGIC1 (ENSSVLG00005013430) #16	RPL26L1 (ENSSVLG00005013228) #18	ATP6V0E1 (ENSSVLG00005013162) #20	CREBRF (ENSSVLG00005013005) #21	BNIP1 (ENSSVLG00005012932) #22	NKX2-5 (ENSSVLG00005012867) #23	STC2 (ENSSVLG00005012797) #24	ENSSVLG00005012611 #25	CPEB4 (ENSSVLG00005012332) #26	C5orf47 (ENSSVLG00005012218) #27	NSG2 (ENSSVLG00005012146) #28	MSX2 (ENSSVLG00005012101) #29	DRD1 (ENSSVLG00005012085) #31	ENSSVLG00005011926 #32	HRH2 (ENSSVLG00005011848) #33	ZNF692 (ENSSVLG00005011774)	ZNF672 (ENSSVLG00005011715)	SH3BP5L (ENSSVLG00005011666)	LYPD8 (ENSSVLG00005011575)	ENSSVLG00005011500