Euarchontoglires DUPLICATION Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000163172 #18 ENSGT00940000153295.a.m.a #19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00900000143263 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Primates ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Simiiformes ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Catarrhini ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Hominoidea ANCESTRAL SPECIES 3 ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000163172 #18 ENSGT00940000153295.a.m.a #19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a ##22 ENSGT00990000203720.a.b.a.a.b ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00390000001376.bb.a.a ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Hominidae ANCESTRAL SPECIES 3 ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000163172 #18 ENSGT00940000153295.a.m.a #19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a ##22 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00390000001376.bb.a.a ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Orangutan MODERN SPECIES C1orf232 (ENSPPYG00000031495) #7 ZNF593 (ENSPPYG00000001693) #8 ZNF593OS (ENSPPYG00000031753) #9 CNKSR1 (ENSPPYG00000001692) #10 CATSPER4 (ENSPPYG00000001691) #11 ENSPPYG00000008742 #12 CEP85 (ENSPPYG00000001690) #13 SH3BGRL3 (ENSPPYG00000001689) #14 UBXN11 (ENSPPYG00000001688) #15 CD52 (ENSPPYG00000001687) #16 CRYBG2 (ENSPPYG00000001686) #17 ZNF683 (ENSPPYG00000001685) #18 LIN28A (ENSPPYG00000001684) #19 ENSPPYG00000014748 #20 DHDDS (ENSPPYG00000001683) #21 HMGN2 (ENSPPYG00000001682) #22 RPS6KA1 (ENSPPYG00000001681) #23 ARID1A (ENSPPYG00000001680) #24 PIGV (ENSPPYG00000001679) #25 ZDHHC18 (ENSPPYG00000001678) #26 SFN (ENSPPYG00000001677) #27 GPN2 (ENSPPYG00000001676) #28 GPATCH3 (ENSPPYG00000001675) #29 NR0B2 (ENSPPYG00000001674) #30 NUDC (ENSPPYG00000001673) #31 KDF1 (ENSPPYG00000001672) #32 TRNP1 (ENSPPYG00000036663) #33 TENT5B (ENSPPYG00000038825) #34 ENSPPYG00000033121 #35 SLC9A1 (ENSPPYG00000001669) #36 ENSPPYG00000017919 #37 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Olive baboon MODERN SPECIES 14 ENSPANG00000046624 DBF4 (ENSPANG00000024063) SLC25A40 (ENSPANG00000025953) RUNDC3B (ENSPANG00000020857) ABCB4 (ENSPANG00000017765) CROT (ENSPANG00000017283) TMEM243 (ENSPANG00000046663) DMTF1 (ENSPANG00000011083) ELAPOR2 (ENSPANG00000006018) ENSPANG00000049327 GRM3 (ENSPANG00000020316) ENSPANG00000030325 SEMA3D (ENSPANG00000010212) ENSPANG00000043818 SEMA3A (ENSPANG00000010326) ENSPANG00000034152 #22 ENSPANG00000034792 SEMA3E (ENSPANG00000014231) PCLO (ENSPANG00000045135) CACNA2D1 (ENSPANG00000011058) HGF (ENSPANG00000016786) SEMA3C (ENSPANG00000018074) CD36 (ENSPANG00000024545) GNAT3 (ENSPANG00000000495) GNAI1 (ENSPANG00000018196) ENSPANG00000048217 ENSPANG00000046036 MAGI2 (ENSPANG00000014539) PHTF2 (ENSPANG00000008428) TMEM60 (ENSPANG00000022872) RSBN1L (ENSPANG00000024544) Platyrrhini ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Cebidae ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Cebidae_a ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Capuchin MODERN SPECIES 215 CHST3 (ENSCCAG00000024311) PSAP (ENSCCAG00000031808) CDH23 (ENSCCAG00000024907) ENSCCAG00000037741 SLC29A3 (ENSCCAG00000025265) UNC5B (ENSCCAG00000037321) PCBD1 (ENSCCAG00000026880) SGPL1 (ENSCCAG00000022681) ENSCCAG00000034244 TBATA (ENSCCAG00000022065) ADAMTS14 (ENSCCAG00000034347) PRF1 (ENSCCAG00000035533) PALD1 (ENSCCAG00000030277) NODAL (ENSCCAG00000032672) EIF4EBP2 (ENSCCAG00000037637) ENSCCAG00000008526 #22 LRRC20 (ENSCCAG00000023860) NPFFR1 (ENSCCAG00000022929) PPA1 (ENSCCAG00000032333) SAR1A (ENSCCAG00000019722) TYSND1 (ENSCCAG00000028714) AIFM2 (ENSCCAG00000037129) MACROH2A2 (ENSCCAG00000034612) COL13A1 (ENSCCAG00000035276) FAM241B (ENSCCAG00000032184) TSPAN15 (ENSCCAG00000029490) TACR2 (ENSCCAG00000022336) ENSCCAG00000032765 HKDC1 (ENSCCAG00000027269) SUPV3L1 (ENSCCAG00000033975) VPS26A (ENSCCAG00000021117) Bolivian squirrel monkey MODERN SPECIES 228 CCDC103 (ENSSBOG00000030207) GFAP (ENSSBOG00000020732) KIF18B (ENSSBOG00000029491) ENSSBOG00000029665 DCAKD (ENSSBOG00000027620) ENSSBOG00000026353 PLCD3 (ENSSBOG00000026284) ACBD4 (ENSSBOG00000029293) HEXIM1 (ENSSBOG00000016824) HEXIM2 (ENSSBOG00000021727) FMNL1 (ENSSBOG00000030224) SPATA32 (ENSSBOG00000028350) MAP3K14 (ENSSBOG00000034027) ARHGAP27 (ENSSBOG00000034994) PLEKHM1 (ENSSBOG00000029615) ENSSBOG00000029992 #22 ENSSBOG00000020588 RPRML (ENSSBOG00000009450) GOSR2 (ENSSBOG00000026651) WNT9B (ENSSBOG00000023584) WNT3 (ENSSBOG00000032225) NSF (ENSSBOG00000026872) Tarsier DUPLICATION Tarsier MODERN SPECIES 4960 ENSTSYG00000028787 ENSTSYG00000034784 #22 ENSTSYG00000032517 HNF4G (ENSTSYG00000002851) Tarsier MODERN SPECIES 4522 ENSTSYG00000032115 ENSTSYG00000030496 #22 CHEK2 (ENSTSYG00000003101) Strepsirrhini ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Lemuriformes ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Mouse lemur MODERN SPECIES 22 OSGEP (ENSMICG00000047093) KLHL33 (ENSMICG00000001522) TEP1 (ENSMICG00000001497) PARP2 (ENSMICG00000001491) CCNB1IP1 (ENSMICG00000041696) TTC5 (ENSMICG00000009403) OR11H6 (ENSMICG00000033931) ENSMICG00000029829 OR4K2 (ENSMICG00000042868) OR4Q2 (ENSMICG00000002537) ENSMICG00000042522 ENSMICG00000028340 ONECUT1 (ENSMICG00000029729) WDR72 (ENSMICG00000003702) UNC13C (ENSMICG00000047202) ENSMICG00000046817 #22 RSL24D1 (ENSMICG00000036329) RAB27A (ENSMICG00000002622) PIGB (ENSMICG00000002623) CCPG1 (ENSMICG00000035464) PIERCE2 (ENSMICG00000030451) ENSMICG00000032770 PYGO1 (ENSMICG00000035806) ENSMICG00000046687 ENSMICG00000017806 ATOSA (ENSMICG00000011870) ENSMICG00000044868 MYO5A (ENSMICG00000013517) MYO5C (ENSMICG00000008381) GNB5 (ENSMICG00000001204) BCL2L10 (ENSMICG00000016608) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000163172 #18 ENSGT00940000153295.a.m.a #19 ENSGT00940000164781 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00900000143263 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew MODERN SPECIES 9946 ENSTBEG00000004536 #22 Tree shrew MODERN SPECIES 3065 DHX57 (ENSTBEG00000005067) GEMIN6 (ENSTBEG00000005016) SRSF7 (ENSTBEG00000004604) GALM (ENSTBEG00000003695) HNRNPLL (ENSTBEG00000003191) ATL2 (ENSTBEG00000002649) CYP1B1 (ENSTBEG00000001857) CDC42EP3 (ENSTBEG00000001606) ENSTBEG00000001350 #22 Tree shrew MODERN SPECIES 5532 EXOC6 (ENSTBEG00000003706) ENSTBEG00000004431 CYP26A1 (ENSTBEG00000004596) MYOF (ENSTBEG00000005063) CEP55 (ENSTBEG00000006004) ENSTBEG00000006397 ENSTBEG00000006747 PDE6C (ENSTBEG00000006962) FRA10AC1 (ENSTBEG00000007620) LGI1 (ENSTBEG00000008072) ENSTBEG00000008293 #22 SLC35G1 (ENSTBEG00000008377) Glires ANCESTRAL SPECIES ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000163172 #18 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00900000143263 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Lagomorpha ANCESTRAL SPECIES 21 ENSGT00940000156529 ENSGT00940000158412 ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00940000157740 #17 ENSGT00940000163172 #18 ENSGT00940000153295.a.m.a #19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00950000182802.B.a.a.a.b.a.b ##22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B ENSGT00390000007371 ENSGT00940000160932 Pika MODERN SPECIES 3967 EXTL1 (ENSOPRG00000001366) SLC30A2 (ENSOPRG00000001390) TRIM63 (ENSOPRG00000001404) PDIK1L (ENSOPRG00000001429) FAM110D (ENSOPRG00000001433) ZNF593 (ENSOPRG00000001439) #8 CNKSR1 (ENSOPRG00000001452) #10 ENSOPRG00000001487 CEP85 (ENSOPRG00000001515) #13 SH3BGRL3 (ENSOPRG00000001538) #14 ENSOPRG00000001544 #15 ENSOPRG00000001564 #17 ENSOPRG00000018194 LIN28A (ENSOPRG00000001591) ##19 DHDDS (ENSOPRG00000001598) #21 HMGN2 (ENSOPRG00000001616) #22 Rodentia ANCESTRAL SPECIES ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000163172 #18 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00900000143263 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Rodentia_A ANCESTRAL SPECIES ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000163172 #18 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00900000143263 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Sciuridae ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.b #22 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 64 ENSSVLG00005021080 #22 Eurasian red squirrel MODERN SPECIES 13 FBXL3 (ENSSVLG00005001661) MYCBP2 (ENSSVLG00005001417) ENSSVLG00005001299 SCEL (ENSSVLG00005001157) ENSSVLG00005000937 EDNRB (ENSSVLG00005000870) POU4F1 (ENSSVLG00005000848) OBI1 (ENSSVLG00005000825) RBM26 (ENSSVLG00005000683) ENSSVLG00005000577 NDFIP2 (ENSSVLG00005000536) ENSSVLG00005000512 ENSSVLG00005000442 SLITRK1 (ENSSVLG00005000428) ENSSVLG00005000392 ENSSVLG00005000367 #22 SLITRK6 (ENSSVLG00005000356) ENSSVLG00005000242 ENSSVLG00005000212 ENSSVLG00005020345 ENSSVLG00005020332 ENSSVLG00005020318 ENSSVLG00005019830 ENSSVLG00005019781 ENSSVLG00005019733 ENSSVLG00005019701 ENSSVLG00005019663 WASF3 (ENSSVLG00005019562) ENSSVLG00005019373 CDK8 (ENSSVLG00005019288) RNF6 (ENSSVLG00005019198) Eurasian red squirrel MODERN SPECIES 12 MBD5 (ENSSVLG00005003333) EPC2 (ENSSVLG00005003372) KIF5C (ENSSVLG00005003411) LYPD6B (ENSSVLG00005003456) LYPD6 (ENSSVLG00005003472) MMADHC (ENSSVLG00005003507) ENSSVLG00005003548 RND3 (ENSSVLG00005003560) ENSSVLG00005003570 RBM43 (ENSSVLG00005003593) ENSSVLG00005003611 ENSSVLG00005003622 TNFAIP6 (ENSSVLG00005003640) RIF1 (ENSSVLG00005003716) NEB (ENSSVLG00005004118) ENSSVLG00005004729 #22 ENSSVLG00005004741 CACNB4 (ENSSVLG00005005336) ENSSVLG00005007179 STAM2 (ENSSVLG00005007197) FMNL2 (ENSSVLG00005007277) ENSSVLG00005007428 PRPF40A (ENSSVLG00005007429) ENSSVLG00005007524 RPRM (ENSSVLG00005007559) ENSSVLG00005007594 KCNJ3 (ENSSVLG00005007729) NR4A2 (ENSSVLG00005007787) GPD2 (ENSSVLG00005007886) ENSSVLG00005008042 ERMN (ENSSVLG00005008084) Marmotini ANCESTRAL SPECIES ENSGT00940000158412 ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT01090000260447 ENSGT00940000157740 #17 ENSGT00940000163172 #18 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00900000143263 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Alpin marmot MODERN SPECIES 11 SYN3 (ENSMMMG00000016926) TIMP3 (ENSMMMG00000016936) FBXO7 (ENSMMMG00000016939) BPIFC (ENSMMMG00000016944) RTCB (ENSMMMG00000016958) PRDM4 (ENSMMMG00000016969) PWP1 (ENSMMMG00000016996) ABTB3 (ENSMMMG00000017014) CRY1 (ENSMMMG00000017030) MTERF2 (ENSMMMG00000017043) TMEM263 (ENSMMMG00000017048) RIC8B (ENSMMMG00000017060) RFX4 (ENSMMMG00000017077) ENSMMMG00000017101 POLR3B (ENSMMMG00000017120) ENSMMMG00000017137 #22 TCP11L2 (ENSMMMG00000017141) ENSMMMG00000017150 CKAP4 (ENSMMMG00000017154) NUAK1 (ENSMMMG00000017169) C12orf75 (ENSMMMG00000017181) APPL2 (ENSMMMG00000017187) WASHC4 (ENSMMMG00000017204) ALDH1L2 (ENSMMMG00000017239) NOPCHAP1 (ENSMMMG00000017266) SLC41A2 (ENSMMMG00000017275) CHST11 (ENSMMMG00000017290) TXNRD1 (ENSMMMG00000017295) ENSMMMG00000017345 NFYB (ENSMMMG00000017353) HCFC2 (ENSMMMG00000017365) Marmotini_b ANCESTRAL SPECIES ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT01090000260447 ENSGT00940000157740 #17 ENSGT00940000163172 #18 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B ENSGT00390000007371 Squirrel MODERN SPECIES 74 TRIM63 (ENSSTOG00000004982) PDIK1L (ENSSTOG00000004995) FAM110D (ENSSTOG00000023295) C1orf232 (ENSSTOG00000030099) #7 ZNF593 (ENSSTOG00000022153) #8 ZNF593OS (ENSSTOG00000032687) #9 CNKSR1 (ENSSTOG00000020206) #10 CATSPER4 (ENSSTOG00000028150) #11 ENSSTOG00000033310 CEP85 (ENSSTOG00000005057) #13 SH3BGRL3 (ENSSTOG00000005087) #14 UBXN11 (ENSSTOG00000005110) #15 CRYBG2 (ENSSTOG00000025229) #17 ENSSTOG00000004329 ##19 DHDDS (ENSSTOG00000004335) #21 HMGN2 (ENSSTOG00000030691) #22 RPS6KA1 (ENSSTOG00000004355) #23 ENSSTOG00000022501 #24 ENSSTOG00000031355 #24 PIGV (ENSSTOG00000021148) #25 ZDHHC18 (ENSSTOG00000015208) #26 SFN (ENSSTOG00000015213) #27 GPN2 (ENSSTOG00000015216) #28 GPATCH3 (ENSSTOG00000015220) #29 NR0B2 (ENSSTOG00000024249) #30 NUDC (ENSSTOG00000021201) #31 KDF1 (ENSSTOG00000015233) #32 TENT5B (ENSSTOG00000022787) #34 ENSSTOG00000021677 ENSSTOG00000025429 SLC9A1 (ENSSTOG00000009815) #36 Hystricomorpha ANCESTRAL SPECIES 4 ENSGT00940000156072 ENSGT00940000156529 ENSGT00940000158412.j ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00940000157740 #17 ENSGT00940000163172 #18 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B ENSGT00390000007371 Naked mole-rat female MODERN SPECIES 15 ENSHGLG00000011488 ENSHGLG00000012382 ENSHGLG00000016465 ENSHGLG00000046414 ITPRIPL2 (ENSHGLG00000037760) COQ7 (ENSHGLG00000018991) ENSHGLG00000018929 ENSHGLG00000010031 ENSHGLG00000040318 CCP110 (ENSHGLG00000018807) VPS35L (ENSHGLG00000018818) KNOP1 (ENSHGLG00000049260) IQCK (ENSHGLG00000014331) ENSHGLG00000049053 GPR139 (ENSHGLG00000034334) ENSHGLG00000050561 #22 ENSHGLG00000009974 UMOD (ENSHGLG00000006685) PDILT (ENSHGLG00000008450) ACSM5 (ENSHGLG00000010732) ENSHGLG00000011441 ENSHGLG00000037112 ENSHGLG00000012971 ENSHGLG00000006014 ENSHGLG00000049216 ENSHGLG00000007282 ENSHGLG00000049148 ENSHGLG00000007912 BFAR (ENSHGLG00000008907) PARN (ENSHGLG00000010886) MRTFB (ENSHGLG00000019009) Hystricomorpha_a ANCESTRAL SPECIES 1 ENSGT00940000156072 ENSGT00940000156529 ENSGT00940000158412.j ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00940000157740 #17 ENSGT00940000163172 #18 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B ENSGT00390000007371 Hystricomorpha_b ANCESTRAL SPECIES 7 ENSGT00940000156072 ENSGT00940000156529 ENSGT00940000158412.j ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00940000157740 #17 ENSGT00940000163172 #18 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B ENSGT00390000007371 Long-tailed chinchilla MODERN SPECIES 159 SLC30A2 (ENSCLAG00000010472) TRIM63 (ENSCLAG00000009429) PDIK1L (ENSCLAG00000010649) FAM110D (ENSCLAG00000010682) C1orf232 (ENSCLAG00000011904) #7 ZNF593 (ENSCLAG00000011066) #8 ZNF593OS (ENSCLAG00000010913) #9 CNKSR1 (ENSCLAG00000006569) #10 CEP85 (ENSCLAG00000008438) #13 UBXN11 (ENSCLAG00000009843) #15 SH3BGRL3 (ENSCLAG00000007979) #14 CRYBG2 (ENSCLAG00000009319) #17 ZNF683 (ENSCLAG00000014629) #18 LIN28A (ENSCLAG00000013508) ##19 DHDDS (ENSCLAG00000009304) #21 HMGN2 (ENSCLAG00000008674) #22 RPS6KA1 (ENSCLAG00000012043) #23 ARID1A (ENSCLAG00000008499) #24 PIGV (ENSCLAG00000011353) #25 ZDHHC18 (ENSCLAG00000015099) #26 SFN (ENSCLAG00000018088) #27 GPN2 (ENSCLAG00000015368) #28 GPATCH3 (ENSCLAG00000012064) #29 NR0B2 (ENSCLAG00000012438) #30 NUDC (ENSCLAG00000008191) #31 KDF1 (ENSCLAG00000009636) #32 TENT5B (ENSCLAG00000010180) #34 SLC9A1 (ENSCLAG00000011250) #36 WDTC1 (ENSCLAG00000012710) TMEM222 (ENSCLAG00000014379) SYTL1 (ENSCLAG00000011750) Guinea pig MODERN SPECIES 25 SLC30A2 (ENSCPOG00000003475) TRIM63 (ENSCPOG00000022922) PDIK1L (ENSCPOG00000011692) FAM110D (ENSCPOG00000039832) C1orf232 (ENSCPOG00000030787) #7 ZNF593OS (ENSCPOG00000031348) #9 ZNF593 (ENSCPOG00000035949) #8 CNKSR1 (ENSCPOG00000007056) #10 CEP85 (ENSCPOG00000007069) #13 SH3BGRL3 (ENSCPOG00000007077) #14 UBXN11 (ENSCPOG00000024029) #15 CRYBG2 (ENSCPOG00000007086) #17 ZNF683 (ENSCPOG00000030245) #18 ENSCPOG00000019646 ##19 DHDDS (ENSCPOG00000008087) #21 HMGN2 (ENSCPOG00000039945) #22 RPS6KA1 (ENSCPOG00000003945) #23 ENSCPOG00000021806 ARID1A (ENSCPOG00000010387) #24 ENSCPOG00000033509 #25 ZDHHC18 (ENSCPOG00000010395) #26 SFN (ENSCPOG00000035257) #27 GPN2 (ENSCPOG00000002848) #28 GPATCH3 (ENSCPOG00000010404) #29 NR0B2 (ENSCPOG00000010409) #30 NUDC (ENSCPOG00000010413) #31 KDF1 (ENSCPOG00000022999) #32 TENT5B (ENSCPOG00000032542) #34 SLC9A1 (ENSCPOG00000035897) #36 WDTC1 (ENSCPOG00000012347) TMEM222 (ENSCPOG00000020198) Rodentia_B ANCESTRAL SPECIES ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000164781 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00900000143263 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Kangaroo rat MODERN SPECIES 325 Trim63 (ENSDORG00000003824) Pdik1l (ENSDORG00000028227) Gm30191 (ENSDORG00000026074) #7 Zfp593 (ENSDORG00000028366) #8 E130218I03Rik (ENSDORG00000026750) #9 Cnksr1 (ENSDORG00000003511) #10 Catsper4 (ENSDORG00000003510) #11 Cep85 (ENSDORG00000011337) #13 Sh3bgrl3 (ENSDORG00000028188) #14 Ubxn11 (ENSDORG00000011339) #15 ENSDORG00000008372 ENSDORG00000008373 #17 ENSDORG00000027789 #18 Lin28a (ENSDORG00000027432) ##19 Dhdds (ENSDORG00000001776) #21 Hmgn2 (ENSDORG00000001787) #22 Rps6ka1 (ENSDORG00000007099) #23 Arid1a (ENSDORG00000002442) #24 Pigv (ENSDORG00000008243) #25 Zdhhc18 (ENSDORG00000012486) #26 Sfn (ENSDORG00000012487) #27 Gpn2 (ENSDORG00000005203) #28 ENSDORG00000005205 #29 Nr0b2 (ENSDORG00000023804) #30 Nudc (ENSDORG00000026035) #31 Kdf1 (ENSDORG00000023459) #32 ENSDORG00000030030 Tent5b (ENSDORG00000015648) #34 Slc9a1 (ENSDORG00000012211) #36 Wdtc1 (ENSDORG00000012982) Tmem222 (ENSDORG00000009464) Myomorpha ANCESTRAL SPECIES 3 ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000164781 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00900000143263 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Lesser Egyptian jerboa MODERN SPECIES 47 Gfm1 (ENSJJAG00000016447) Lxn (ENSJJAG00000013889) Mlf1 (ENSJJAG00000016680) Rsrc1 (ENSJJAG00000013815) ENSJJAG00000013277 Shox2 (ENSJJAG00000014041) ENSJJAG00000014616 ENSJJAG00000016473 Veph1 (ENSJJAG00000014528) Ptx3 (ENSJJAG00000022554) ENSJJAG00000011566 Ccnl1 (ENSJJAG00000023702) ENSJJAG00000021019 ENSJJAG00000017620 ENSJJAG00000016465 ENSJJAG00000003128 #22 Tiparp (ENSJJAG00000014369) Ssr3 (ENSJJAG00000017278) Kcnab1 (ENSJJAG00000018614) Muroidea ANCESTRAL SPECIES 3 ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000164781 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00900000143263 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Upper Galilee mountains blind mole rat MODERN SPECIES 1320 Lrig3 (ENSNGAG00000017007) ENSNGAG00000016710 Tafa2 (ENSNGAG00000016397) Usp15 (ENSNGAG00000015079) Mon2 (ENSNGAG00000011389) Ppm1h (ENSNGAG00000005472) ENSNGAG00000014384 #22 Avpr1a (ENSNGAG00000002648) Muroidea_A ANCESTRAL SPECIES 3 ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000164781 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00900000143263 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Murinae ANCESTRAL SPECIES 2 ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000164781 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00900000143263 ENSGT00390000016565 #32 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Mus ANCESTRAL SPECIES 3 ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000164781 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00900000143263 ENSGT00390000016565 #32 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Mus_A ANCESTRAL SPECIES 3 ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000164781 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00900000143263 ENSGT00390000016565 #32 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Mus_B ANCESTRAL SPECIES 5 ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000164781 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00900000143263 ENSGT00390000016565 #32 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Mouse MODERN SPECIES 13 Fam110d (ENSMUSG00000050105) Gm30191 (ENSMUSG00000108398) #7 E130218I03Rik (ENSMUSG00000086322) #9 Zfp593 (ENSMUSG00000028840) #8 Cnksr1 (ENSMUSG00000028841) #10 Catsper4 (ENSMUSG00000048003) #11 Zpld2 (ENSMUSG00000073747) Cep85 (ENSMUSG00000037443) #13 Sh3bgrl3 (ENSMUSG00000028843) #14 Ubxn11 (ENSMUSG00000012126) #15 Cd52 (ENSMUSG00000000682) #16 Crybg2 (ENSMUSG00000012123) #17 Zfp683 (ENSMUSG00000049410) Lin28a (ENSMUSG00000050966) ##19 Dhdds (ENSMUSG00000012117) #21 Hmgn2 (ENSMUSG00000003038) #22 Rps6ka1 (ENSMUSG00000003644) #23 Arid1a (ENSMUSG00000007880) #24 Pigv (ENSMUSG00000043257) #25 Zdhhc18 (ENSMUSG00000037553) #26 Sfn (ENSMUSG00000047281) #27 Gpn2 (ENSMUSG00000028848) #28 Gpatch3 (ENSMUSG00000028850) #29 Nr0b2 (ENSMUSG00000037583) #30 Nudc (ENSMUSG00000028851) #31 Kdf1 (ENSMUSG00000037600) #32 Trnp1 (ENSMUSG00000056596) #33 Tent5b (ENSMUSG00000046694) #34 Slc9a1 (ENSMUSG00000028854) #36 Wdtc1 (ENSMUSG00000037622) Tmem222 (ENSMUSG00000028857) Mus_C ANCESTRAL SPECIES 2 ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000164781 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00900000143263 ENSGT00390000016565 #32 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 114 Pmpcb (ENSMSIG00000023391) Dnajc2 (ENSMSIG00000023328) Psmc2 (ENSMSIG00000023312) Slc26a5 (ENSMSIG00000023172) ENSMSIG00000023109 #22 Reln (ENSMSIG00000022798) Orc5 (ENSMSIG00000022758) Steppe mouse MODERN SPECIES 2877 ENSMSIG00000009539 ENSMSIG00000009557 Hrg (ENSMSIG00000009566) Fetub (ENSMSIG00000009611) Ahsg (ENSMSIG00000009633) Dnajb11 (ENSMSIG00000009695) Tbccd1 (ENSMSIG00000009718) Crygs (ENSMSIG00000009778) Dgkg (ENSMSIG00000009800) ENSMSIG00000010017 #22 ENSMSIG00000010024 Tra2b (ENSMSIG00000010089) Igf2bp2 (ENSMSIG00000010136) ENSMSIG00000010168 Senp2 (ENSMSIG00000010175) Liph (ENSMSIG00000010223) Tmem41a (ENSMSIG00000010249) Map3k13 (ENSMSIG00000010272) spretus DUPLICATION spretus MODERN SPECIES 4 Hapln1 (MGP_SPRETEiJ_G0019637) Vcan (MGP_SPRETEiJ_G0019638) Xrcc4 (MGP_SPRETEiJ_G0019639) Tmem167 (MGP_SPRETEiJ_G0019640) MGP_SPRETEiJ_G0019641 Atp6ap1l (MGP_SPRETEiJ_G0019642) Rps23 (MGP_SPRETEiJ_G0019643) Atg10 (MGP_SPRETEiJ_G0019644) MGP_SPRETEiJ_G0019645 Ssbp2 (MGP_SPRETEiJ_G0019646) Acot12 (MGP_SPRETEiJ_G0019647) Zcchc9 (MGP_SPRETEiJ_G0019648) Ckmt2 (MGP_SPRETEiJ_G0019649) Rasgrf2 (MGP_SPRETEiJ_G0019650) Msh3 (MGP_SPRETEiJ_G0019651) MGP_SPRETEiJ_G0019652 #22 Dhfr (MGP_SPRETEiJ_G0019653) Ankrd34b (MGP_SPRETEiJ_G0019654) Fam151b (MGP_SPRETEiJ_G0019655) Zfyve16 (MGP_SPRETEiJ_G0019656) Spz1 (MGP_SPRETEiJ_G0019657) Serinc5 (MGP_SPRETEiJ_G0019658) Thbs4 (MGP_SPRETEiJ_G0019659) Mtx3 (MGP_SPRETEiJ_G0019660) Cmya5 (MGP_SPRETEiJ_G0019661) Tent2 (MGP_SPRETEiJ_G0019662) Homer1 (MGP_SPRETEiJ_G0019663) Jmy (MGP_SPRETEiJ_G0019664) MGP_SPRETEiJ_G0019665 Bhmt2 (MGP_SPRETEiJ_G0019666) Dmgdh (MGP_SPRETEiJ_G0019667) spretus MODERN SPECIES 13 Fam110d (MGP_SPRETEiJ_G0027596) Gm30191 (MGP_SPRETEiJ_G0027595) #7 E130218I03Rik (MGP_SPRETEiJ_G0027594) #9 Zfp593 (MGP_SPRETEiJ_G0027593) #8 Cnksr1 (MGP_SPRETEiJ_G0027592) #10 Catsper4 (MGP_SPRETEiJ_G0027591) #11 Zpld2 (MGP_SPRETEiJ_G0027590) Cep85 (MGP_SPRETEiJ_G0027589) #13 Sh3bgrl3 (MGP_SPRETEiJ_G0027588) #14 Ubxn11 (MGP_SPRETEiJ_G0027587) #15 Cd52 (MGP_SPRETEiJ_G0027586) #16 Crybg2 (MGP_SPRETEiJ_G0027585) #17 Zfp683 (MGP_SPRETEiJ_G0027584) Lin28a (MGP_SPRETEiJ_G0027583) ##19 Dhdds (MGP_SPRETEiJ_G0027582) #21 Hmgn2 (MGP_SPRETEiJ_G0027581) #22 Rps6ka1 (MGP_SPRETEiJ_G0027580) #23 Arid1a (MGP_SPRETEiJ_G0027579) #24 Pigv (MGP_SPRETEiJ_G0027578) #25 Zdhhc18 (MGP_SPRETEiJ_G0027577) #26 Gpn2 (MGP_SPRETEiJ_G0027576) #28 Gpatch3 (MGP_SPRETEiJ_G0027575) #29 Nr0b2 (MGP_SPRETEiJ_G0027574) #30 Nudc (MGP_SPRETEiJ_G0027573) #31 Kdf1 (MGP_SPRETEiJ_G0027572) #32 Trnp1 (MGP_SPRETEiJ_G0027571) #33 Tent5b (MGP_SPRETEiJ_G0027570) #34 Slc9a1 (MGP_SPRETEiJ_G0027569) #36 Wdtc1 (MGP_SPRETEiJ_G0027568) Tmem222 (MGP_SPRETEiJ_G0027567) Sytl1 (MGP_SPRETEiJ_G0027566) Cricetidae ANCESTRAL SPECIES 2 ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000164781 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00900000143263 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00950000183056.A.a ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00860000134004 #16 ENSGT00940000157740 #17 ENSGT00940000164781 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B ENSGT00390000007371 Northern American deer mouse MODERN SPECIES 11 Fam110d (ENSPEMG00000016313) Gm30191 (ENSPEMG00000012736) #7 Zfp593 (ENSPEMG00000011884) #8 E130218I03Rik (ENSPEMG00000012827) #9 Cnksr1 (ENSPEMG00000008995) #10 Catsper4 (ENSPEMG00000006617) #11 ENSPEMG00000014772 Cep85 (ENSPEMG00000020365) #13 Sh3bgrl3 (ENSPEMG00000028751) #14 Ubxn11 (ENSPEMG00000013530) #15 Cd52 (ENSPEMG00000026941) #16 Crybg2 (ENSPEMG00000016024) #17 Zfp683 (ENSPEMG00000015866) Lin28a (ENSPEMG00000012419) ##19 Dhdds (ENSPEMG00000015638) #21 Hmgn2 (ENSPEMG00000006552) #22 Rps6ka1 (ENSPEMG00000001640) #23 Arid1a (ENSPEMG00000009102) #24 Pigv (ENSPEMG00000000163) #25 Zdhhc18 (ENSPEMG00000022857) #26 Sfn (ENSPEMG00000004203) #27 Gpn2 (ENSPEMG00000020796) #28 Gpatch3 (ENSPEMG00000020632) #29 Nr0b2 (ENSPEMG00000020621) #30 Nudc (ENSPEMG00000020579) #31 Kdf1 (ENSPEMG00000010418) #32 ENSPEMG00000020456 ENSPEMG00000024927 Tent5b (ENSPEMG00000026289) #34 Slc9a1 (ENSPEMG00000008998) #36 Wdtc1 (ENSPEMG00000011264) Cricetinae ANCESTRAL SPECIES 5 ENSGT00530000067301 #7 ENSGT00390000004173 #8 ENSGT01070000253847 #9 ENSGT00940000159599 #10 ENSGT00940000161879 #11 ENSGT00720000109135 ENSGT00620000087993.a.b.c #13 ENSGT00620000087993.a.b.d #13 ENSGT00940000157260 #14 ENSGT00520000055567.b #15 ENSGT00940000168930 ENSGT00940000157740 #17 ENSGT00940000164781 ENSGT00940000153295.a.n ##19 ENSGT00390000007879 #21 ENSGT00950000182802.B.a.a.a.a.i.b #22 ENSGT00940000159314 #23 ENSGT00940000155194 #24 ENSGT00390000013174 #25 ENSGT00940000156585 #26 ENSGT01090000260040.b.b.b.a #27 ENSGT00950000183172.B #28 ENSGT00390000004191 #29 ENSGT00390000015719.c #30 ENSGT00940000155361 #31 ENSGT00390000016565 #32 ENSGT00900000143263 ENSGT00390000017418 #33 ENSGT00940000160747 #34 ENSGT00940000156338 #36 ENSGT00950000182900.B Chinese hamster chok1gshd MODERN SPECIES 111 Fam110d (ENSCGRG00001002609) Gm30191 (ENSCGRG00001023133) #7 Zfp593 (ENSCGRG00001010679) #8 E130218I03Rik (ENSCGRG00001011451) #9 Cnksr1 (ENSCGRG00001024045) #10 Catsper4 (ENSCGRG00001006536) #11 Zpld2 (ENSCGRG00001023657) Cep85 (ENSCGRG00001013982) #13 Sh3bgrl3 (ENSCGRG00001017433) #14 Ubxn11 (ENSCGRG00001022013) #15 ENSCGRG00001020409 Crybg2 (ENSCGRG00001023744) #17 Zfp683 (ENSCGRG00001024633) Lin28a (ENSCGRG00001017186) ##19 Dhdds (ENSCGRG00001014342) #21 Hmgn2 (ENSCGRG00001020969) #22 Rps6ka1 (ENSCGRG00001024951) #23 Arid1a (ENSCGRG00001022343) #24 Pigv (ENSCGRG00001013693) #25 Zdhhc18 (ENSCGRG00001024788) #26 Sfn (ENSCGRG00001008371) #27 Gpn2 (ENSCGRG00001023875) #28 Gpatch3 (ENSCGRG00001002930) #29 Nr0b2 (ENSCGRG00001020066) #30 ENSCGRG00001022208 #31 Kdf1 (ENSCGRG00001003180) #32 ENSCGRG00001022474 Trnp1 (ENSCGRG00001024587) #33 Tent5b (ENSCGRG00001024770) #34 Slc9a1 (ENSCGRG00001002747) #36 Wdtc1 (ENSCGRG00001015126) Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 657 ENSMAUG00000009698 #22 ENSMAUG00000011993 Lrfn5 (ENSMAUG00000012313) ENSMAUG00000012931 ENSMAUG00000018008 Gm527 (ENSMAUG00000013479) Klhl28 (ENSMAUG00000013866) Togaram1 (ENSMAUG00000019675) Prpf39 (ENSMAUG00000003291) Fkbp3 (ENSMAUG00000014997) Fancm (ENSMAUG00000015450) Mis18bp1 (ENSMAUG00000018267) Garem2 (ENSMAUG00000019987) Hadha (ENSMAUG00000004383) Hadhb (ENSMAUG00000007811) ENSMAUG00000009372 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 620 ENSMAUG00000020170 Msh3 (ENSMAUG00000021619) Rasgrf2 (ENSMAUG00000016036) Ckmt2 (ENSMAUG00000008773) Zcchc9 (ENSMAUG00000022026) Acot12 (ENSMAUG00000019809) Ssbp2 (ENSMAUG00000010660) Atg10 (ENSMAUG00000011026) ENSMAUG00000011243 Atp6ap1l (ENSMAUG00000001232) ENSMAUG00000001668 Tmem167 (ENSMAUG00000000975) Xrcc4 (ENSMAUG00000006508) ENSMAUG00000011125 Hapln1 (ENSMAUG00000008810) ENSMAUG00000022083 #22 Edil3 (ENSMAUG00000009286) Cox7c (ENSMAUG00000005056) Rasa1 (ENSMAUG00000011139) Ccnh (ENSMAUG00000017406) Tmem161b (ENSMAUG00000014575) ENSMAUG00000015735 Mef2c (ENSMAUG00000015018) Cetn3 (ENSMAUG00000021390) Mblac2 (ENSMAUG00000019084) ENSMAUG00000008528 Lysmd3 (ENSMAUG00000001625) ENSMAUG00000021704 ENSMAUG00000008116 ENSMAUG00000010057 Arrdc3 (ENSMAUG00000010410) Golden Hamster MODERN SPECIES 716 ENSMAUG00000006642 Pnn (ENSMAUG00000021942) ENSMAUG00000016694 Trappc6b (ENSMAUG00000020817) Gemin2 (ENSMAUG00000017447) Sec23a (ENSMAUG00000008174) ENSMAUG00000000784 Clec14a (ENSMAUG00000008282) Ttc6 (ENSMAUG00000004751) Foxa1 (ENSMAUG00000013476) Mipol1 (ENSMAUG00000008618) Slc25a21 (ENSMAUG00000003076) Pax9 (ENSMAUG00000009067) Nkx2-9 (ENSMAUG00000020382) Nkx2-1 (ENSMAUG00000019963) ENSMAUG00000012140 #22 Brms1l (ENSMAUG00000020210) ENSMAUG00000009162 Ralgapa1 (ENSMAUG00000013201) Insm2 (ENSMAUG00000003017) Nfkbia (ENSMAUG00000006212) Psma6 (ENSMAUG00000019916) Prorp (ENSMAUG00000019281) Ppp2r3c (ENSMAUG00000016875) ENSMAUG00000010631 ENSMAUG00000014447 Baz1a (ENSMAUG00000012163) Cfl2 (ENSMAUG00000000736) ENSMAUG00000014794 Eapp (ENSMAUG00000011998) Sptssa (ENSMAUG00000014218) Euarchontoglires DUPLICATION Euarchontoglires ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.a ##22 Primates ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.a ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.a ##22 Mas night monkey MODERN SPECIES 776 CROT (ENSANAG00000028065) ABCB4 (ENSANAG00000022051) ENSANAG00000028505 RUNDC3B (ENSANAG00000026218) SLC25A40 (ENSANAG00000033214) ENSANAG00000035490 ADAM22 (ENSANAG00000034950) ENSANAG00000022466 STEAP4 (ENSANAG00000037956) ZNF804B (ENSANAG00000035191) ENSANAG00000019602 ##22 ENSANAG00000023207 ENSANAG00000022768 STEAP2 (ENSANAG00000029220) CFAP69 (ENSANAG00000026248) GTPBP10 (ENSANAG00000020267) CLDN12 (ENSANAG00000019188) CDK14 (ENSANAG00000034381) MTERF1 (ENSANAG00000022640) AKAP9 (ENSANAG00000035864) CYP51A1 (ENSANAG00000036665) LRRD1 (ENSANAG00000029885) KRIT1 (ENSANAG00000034244) ANKIB1 (ENSANAG00000038408) GATAD1 (ENSANAG00000037321) PEX1 (ENSANAG00000032378) Tarsier MODERN SPECIES 7338 NEK1 (ENSTSYG00000001460) ENSTSYG00000025490 ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.a ##22 Glires ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.a ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.a ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.a ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.a ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.a ##22 Degu MODERN SPECIES 78 SGK2 (ENSODEG00000014377) ENSODEG00000015466 L3MBTL1 (ENSODEG00000014727) ENSODEG00000016510 PTPRT (ENSODEG00000015540) ENSODEG00000015100 ENSODEG00000016376 ENSODEG00000015660 ENSODEG00000014457 ENSODEG00000015358 EMILIN3 (ENSODEG00000014427) LPIN3 (ENSODEG00000014914) ENSODEG00000014057 ZHX3 (ENSODEG00000014535) PLCG1 (ENSODEG00000015157) ENSODEG00000020264 ##22 TOP1 (ENSODEG00000014384) ENSODEG00000020525 DHX35 (ENSODEG00000015255) ENSODEG00000014469 FAM83D (ENSODEG00000014195) PPP1R16B (ENSODEG00000016247) ACTR5 (ENSODEG00000016055) SLC32A1 (ENSODEG00000014651) RALGAPB (ENSODEG00000014771) ENSODEG00000013713 LBP (ENSODEG00000013966) KIAA1755 (ENSODEG00000013883) TGM2 (ENSODEG00000014522) RPRD1B (ENSODEG00000014735) TTI1 (ENSODEG00000013968) Tree shrew MODERN SPECIES 8516 ENSTBEG00000007654 ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182802.B.a.a.a.a.i.a.b ##22 Tree shrew MODERN SPECIES 5418 HELB (ENSTBEG00000008697) IRAK3 (ENSTBEG00000008511) ENSTBEG00000008422 ##22 TMBIM4 (ENSTBEG00000007979)