Boreoeutheria	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i #22
Euarchontoglires	DUPLICATION
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a.m.a ##20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a.m.a ##20	ENSGT00940000164781 #19	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Glires	ANCESTRAL SPECIES		ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Rodentia	ANCESTRAL SPECIES		ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Rodentia_B	ANCESTRAL SPECIES		ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000164781 #19	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000164781 #19	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Muroidea	ANCESTRAL SPECIES	3	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000164781 #19	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000164781 #19	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Murinae	ANCESTRAL SPECIES	2	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000164781 #19	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00900000143263	ENSGT00390000016565 #31	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Mus	ANCESTRAL SPECIES	3	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000164781 #19	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00900000143263	ENSGT00390000016565 #31	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Mus_A	ANCESTRAL SPECIES	3	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000164781 #19	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00900000143263	ENSGT00390000016565 #31	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Mus_B	ANCESTRAL SPECIES	5	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000164781 #19	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00900000143263	ENSGT00390000016565 #31	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Mus_C	ANCESTRAL SPECIES	2	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000164781 #19	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00900000143263	ENSGT00390000016565 #31	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
spretus	DUPLICATION
spretus	MODERN SPECIES	13	Fam110d (MGP_SPRETEiJ_G0027596) #7	Gm30191 (MGP_SPRETEiJ_G0027595) #8	E130218I03Rik (MGP_SPRETEiJ_G0027594) #9	Zfp593 (MGP_SPRETEiJ_G0027593) #10	Cnksr1 (MGP_SPRETEiJ_G0027592) #11	Catsper4 (MGP_SPRETEiJ_G0027591) #12	Zpld2 (MGP_SPRETEiJ_G0027590) #13	Cep85 (MGP_SPRETEiJ_G0027589) #14	Sh3bgrl3 (MGP_SPRETEiJ_G0027588) #15	Ubxn11 (MGP_SPRETEiJ_G0027587) #16	Cd52 (MGP_SPRETEiJ_G0027586) #17	Crybg2 (MGP_SPRETEiJ_G0027585) #18	Zfp683 (MGP_SPRETEiJ_G0027584) #19	Lin28a (MGP_SPRETEiJ_G0027583) #20	Dhdds (MGP_SPRETEiJ_G0027582) #21	Hmgn2 (MGP_SPRETEiJ_G0027581) #22	Rps6ka1 (MGP_SPRETEiJ_G0027580) #23	Arid1a (MGP_SPRETEiJ_G0027579) #24	Pigv (MGP_SPRETEiJ_G0027578) #25	Zdhhc18 (MGP_SPRETEiJ_G0027577) #26	Gpn2 (MGP_SPRETEiJ_G0027576) #27	Gpatch3 (MGP_SPRETEiJ_G0027575) #28	Nr0b2 (MGP_SPRETEiJ_G0027574) #29	Nudc (MGP_SPRETEiJ_G0027573) #30	Kdf1 (MGP_SPRETEiJ_G0027572) #31	Trnp1 (MGP_SPRETEiJ_G0027571) #32	Tent5b (MGP_SPRETEiJ_G0027570) #33	Slc9a1 (MGP_SPRETEiJ_G0027569) #34	Wdtc1 (MGP_SPRETEiJ_G0027568) #35	Tmem222 (MGP_SPRETEiJ_G0027567) #36	Sytl1 (MGP_SPRETEiJ_G0027566) #37
spretus	MODERN SPECIES	4	Hapln1 (MGP_SPRETEiJ_G0019637)	Vcan (MGP_SPRETEiJ_G0019638)	Xrcc4 (MGP_SPRETEiJ_G0019639)	Tmem167 (MGP_SPRETEiJ_G0019640)	MGP_SPRETEiJ_G0019641	Atp6ap1l (MGP_SPRETEiJ_G0019642)	Rps23 (MGP_SPRETEiJ_G0019643)	Atg10 (MGP_SPRETEiJ_G0019644)	MGP_SPRETEiJ_G0019645	Ssbp2 (MGP_SPRETEiJ_G0019646)	Acot12 (MGP_SPRETEiJ_G0019647)	Zcchc9 (MGP_SPRETEiJ_G0019648)	Ckmt2 (MGP_SPRETEiJ_G0019649)	Rasgrf2 (MGP_SPRETEiJ_G0019650)	Msh3 (MGP_SPRETEiJ_G0019651)	MGP_SPRETEiJ_G0019652 ##22	Dhfr (MGP_SPRETEiJ_G0019653)	Ankrd34b (MGP_SPRETEiJ_G0019654)	Fam151b (MGP_SPRETEiJ_G0019655)	Zfyve16 (MGP_SPRETEiJ_G0019656)	Spz1 (MGP_SPRETEiJ_G0019657)	Serinc5 (MGP_SPRETEiJ_G0019658)	Thbs4 (MGP_SPRETEiJ_G0019659)	Mtx3 (MGP_SPRETEiJ_G0019660)	Cmya5 (MGP_SPRETEiJ_G0019661)	Tent2 (MGP_SPRETEiJ_G0019662)	Homer1 (MGP_SPRETEiJ_G0019663)	Jmy (MGP_SPRETEiJ_G0019664)	MGP_SPRETEiJ_G0019665	Bhmt2 (MGP_SPRETEiJ_G0019666)	Dmgdh (MGP_SPRETEiJ_G0019667)
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	114												Pmpcb (ENSMSIG00000023391)	Dnajc2 (ENSMSIG00000023328)	Psmc2 (ENSMSIG00000023312)	Slc26a5 (ENSMSIG00000023172)	ENSMSIG00000023109 #22	Reln (ENSMSIG00000022798)	Orc5 (ENSMSIG00000022758)
Steppe mouse	MODERN SPECIES	2877							ENSMSIG00000009539	ENSMSIG00000009557	Hrg (ENSMSIG00000009566)	Fetub (ENSMSIG00000009611)	Ahsg (ENSMSIG00000009633)	Dnajb11 (ENSMSIG00000009695)	Tbccd1 (ENSMSIG00000009718)	Crygs (ENSMSIG00000009778)	Dgkg (ENSMSIG00000009800)	ENSMSIG00000010017 #22	ENSMSIG00000010024	Tra2b (ENSMSIG00000010089)	Igf2bp2 (ENSMSIG00000010136)	ENSMSIG00000010168	Senp2 (ENSMSIG00000010175)	Liph (ENSMSIG00000010223)	Tmem41a (ENSMSIG00000010249)	Map3k13 (ENSMSIG00000010272)
Mouse	MODERN SPECIES	13	Fam110d (ENSMUSG00000050105) #7	Gm30191 (ENSMUSG00000108398) #8	E130218I03Rik (ENSMUSG00000086322) #9	Zfp593 (ENSMUSG00000028840) #10	Cnksr1 (ENSMUSG00000028841) #11	Catsper4 (ENSMUSG00000048003) #12	Zpld2 (ENSMUSG00000073747) #13	Cep85 (ENSMUSG00000037443) #14	Sh3bgrl3 (ENSMUSG00000028843) #15	Ubxn11 (ENSMUSG00000012126) #16	Cd52 (ENSMUSG00000000682) #17	Crybg2 (ENSMUSG00000012123) #18	Zfp683 (ENSMUSG00000049410) #19	Lin28a (ENSMUSG00000050966) #20	Dhdds (ENSMUSG00000012117) #21	Hmgn2 (ENSMUSG00000003038) #22	Rps6ka1 (ENSMUSG00000003644) #23	Arid1a (ENSMUSG00000007880) #24	Pigv (ENSMUSG00000043257) #25	Zdhhc18 (ENSMUSG00000037553) #26	Sfn (ENSMUSG00000047281)	Gpn2 (ENSMUSG00000028848) #27	Gpatch3 (ENSMUSG00000028850) #28	Nr0b2 (ENSMUSG00000037583) #29	Nudc (ENSMUSG00000028851) #30	Kdf1 (ENSMUSG00000037600) #31	Trnp1 (ENSMUSG00000056596) #32	Tent5b (ENSMUSG00000046694) #33	Slc9a1 (ENSMUSG00000028854) #34	Wdtc1 (ENSMUSG00000037622) #35	Tmem222 (ENSMUSG00000028857) #36
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000164781 #19	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000164781 #19	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35	ENSGT00390000007371 #36
Northern American deer mouse	MODERN SPECIES	11	Fam110d (ENSPEMG00000016313) #7	Gm30191 (ENSPEMG00000012736) #8	Zfp593 (ENSPEMG00000011884) #10	E130218I03Rik (ENSPEMG00000012827) #9	Cnksr1 (ENSPEMG00000008995) #11	Catsper4 (ENSPEMG00000006617) #12	ENSPEMG00000014772 #13	Cep85 (ENSPEMG00000020365) #14	Sh3bgrl3 (ENSPEMG00000028751) #15	Ubxn11 (ENSPEMG00000013530) #16	Cd52 (ENSPEMG00000026941) #17	Crybg2 (ENSPEMG00000016024) #18	Zfp683 (ENSPEMG00000015866) #19	Lin28a (ENSPEMG00000012419) #20	Dhdds (ENSPEMG00000015638) #21	Hmgn2 (ENSPEMG00000006552) #22	Rps6ka1 (ENSPEMG00000001640) #23	Arid1a (ENSPEMG00000009102) #24	Pigv (ENSPEMG00000000163) #25	Zdhhc18 (ENSPEMG00000022857) #26	Sfn (ENSPEMG00000004203)	Gpn2 (ENSPEMG00000020796) #27	Gpatch3 (ENSPEMG00000020632) #28	Nr0b2 (ENSPEMG00000020621) #29	Nudc (ENSPEMG00000020579) #30	Kdf1 (ENSPEMG00000010418) #31	ENSPEMG00000020456	ENSPEMG00000024927	Tent5b (ENSPEMG00000026289) #33	Slc9a1 (ENSPEMG00000008998) #34	Wdtc1 (ENSPEMG00000011264) #35
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b.c #14	ENSGT00620000087993.a.b.d #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00940000168930	ENSGT00940000157740 #18	ENSGT00940000164781 #19	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Chinese hamster chok1gshd	MODERN SPECIES	111	Fam110d (ENSCGRG00001002609) #7	Gm30191 (ENSCGRG00001023133) #8	Zfp593 (ENSCGRG00001010679) #10	E130218I03Rik (ENSCGRG00001011451) #9	Cnksr1 (ENSCGRG00001024045) #11	Catsper4 (ENSCGRG00001006536) #12	Zpld2 (ENSCGRG00001023657) #13	Cep85 (ENSCGRG00001013982) #14	Sh3bgrl3 (ENSCGRG00001017433) #15	Ubxn11 (ENSCGRG00001022013) #16	ENSCGRG00001020409	Crybg2 (ENSCGRG00001023744) #18	Zfp683 (ENSCGRG00001024633) #19	Lin28a (ENSCGRG00001017186) #20	Dhdds (ENSCGRG00001014342) #21	Hmgn2 (ENSCGRG00001020969) #22	Rps6ka1 (ENSCGRG00001024951) #23	Arid1a (ENSCGRG00001022343) #24	Pigv (ENSCGRG00001013693) #25	Zdhhc18 (ENSCGRG00001024788) #26	Sfn (ENSCGRG00001008371)	Gpn2 (ENSCGRG00001023875) #27	Gpatch3 (ENSCGRG00001002930) #28	Nr0b2 (ENSCGRG00001020066) #29	ENSCGRG00001022208 #30	Kdf1 (ENSCGRG00001003180) #31	ENSCGRG00001022474	Trnp1 (ENSCGRG00001024587) #32	Tent5b (ENSCGRG00001024770) #33	Slc9a1 (ENSCGRG00001002747) #34	Wdtc1 (ENSCGRG00001015126) #35
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	657																ENSMAUG00000009698 #22	ENSMAUG00000011993	Lrfn5 (ENSMAUG00000012313)	ENSMAUG00000012931	ENSMAUG00000018008	Gm527 (ENSMAUG00000013479)	Klhl28 (ENSMAUG00000013866)	Togaram1 (ENSMAUG00000019675)	Prpf39 (ENSMAUG00000003291)	Fkbp3 (ENSMAUG00000014997)	Fancm (ENSMAUG00000015450)	Mis18bp1 (ENSMAUG00000018267)	Garem2 (ENSMAUG00000019987)	Hadha (ENSMAUG00000004383)	Hadhb (ENSMAUG00000007811)	ENSMAUG00000009372
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	620	ENSMAUG00000020170	Msh3 (ENSMAUG00000021619)	Rasgrf2 (ENSMAUG00000016036)	Ckmt2 (ENSMAUG00000008773)	Zcchc9 (ENSMAUG00000022026)	Acot12 (ENSMAUG00000019809)	Ssbp2 (ENSMAUG00000010660)	Atg10 (ENSMAUG00000011026)	ENSMAUG00000011243	Atp6ap1l (ENSMAUG00000001232)	ENSMAUG00000001668	Tmem167 (ENSMAUG00000000975)	Xrcc4 (ENSMAUG00000006508)	ENSMAUG00000011125	Hapln1 (ENSMAUG00000008810)	ENSMAUG00000022083 #22	Edil3 (ENSMAUG00000009286)	Cox7c (ENSMAUG00000005056)	Rasa1 (ENSMAUG00000011139)	Ccnh (ENSMAUG00000017406)	Tmem161b (ENSMAUG00000014575)	ENSMAUG00000015735	Mef2c (ENSMAUG00000015018)	Cetn3 (ENSMAUG00000021390)	Mblac2 (ENSMAUG00000019084)	ENSMAUG00000008528	Lysmd3 (ENSMAUG00000001625)	ENSMAUG00000021704	ENSMAUG00000008116	ENSMAUG00000010057	Arrdc3 (ENSMAUG00000010410)
Golden Hamster	MODERN SPECIES	716	ENSMAUG00000006642	Pnn (ENSMAUG00000021942)	ENSMAUG00000016694	Trappc6b (ENSMAUG00000020817)	Gemin2 (ENSMAUG00000017447)	Sec23a (ENSMAUG00000008174)	ENSMAUG00000000784	Clec14a (ENSMAUG00000008282)	Ttc6 (ENSMAUG00000004751)	Foxa1 (ENSMAUG00000013476)	Mipol1 (ENSMAUG00000008618)	Slc25a21 (ENSMAUG00000003076)	Pax9 (ENSMAUG00000009067)	Nkx2-9 (ENSMAUG00000020382)	Nkx2-1 (ENSMAUG00000019963)	ENSMAUG00000012140 #22	Brms1l (ENSMAUG00000020210)	ENSMAUG00000009162	Ralgapa1 (ENSMAUG00000013201)	Insm2 (ENSMAUG00000003017)	Nfkbia (ENSMAUG00000006212)	Psma6 (ENSMAUG00000019916)	Prorp (ENSMAUG00000019281)	Ppp2r3c (ENSMAUG00000016875)	ENSMAUG00000010631	ENSMAUG00000014447	Baz1a (ENSMAUG00000012163)	Cfl2 (ENSMAUG00000000736)	ENSMAUG00000014794	Eapp (ENSMAUG00000011998)	Sptssa (ENSMAUG00000014218)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1320										Lrig3 (ENSNGAG00000017007)	ENSNGAG00000016710	Tafa2 (ENSNGAG00000016397)	Usp15 (ENSNGAG00000015079)	Mon2 (ENSNGAG00000011389)	Ppm1h (ENSNGAG00000005472)	ENSNGAG00000014384 #22	Avpr1a (ENSNGAG00000002648)
Lesser Egyptian jerboa	MODERN SPECIES	47	Gfm1 (ENSJJAG00000016447)	Lxn (ENSJJAG00000013889)	Mlf1 (ENSJJAG00000016680)	Rsrc1 (ENSJJAG00000013815)	ENSJJAG00000013277	Shox2 (ENSJJAG00000014041)	ENSJJAG00000014616	ENSJJAG00000016473	Veph1 (ENSJJAG00000014528)	Ptx3 (ENSJJAG00000022554)	ENSJJAG00000011566	Ccnl1 (ENSJJAG00000023702)	ENSJJAG00000021019	ENSJJAG00000017620	ENSJJAG00000016465	ENSJJAG00000003128 #22	Tiparp (ENSJJAG00000014369)	Ssr3 (ENSJJAG00000017278)	Kcnab1 (ENSJJAG00000018614)
Kangaroo rat	MODERN SPECIES	325	Trim63 (ENSDORG00000003824)	Pdik1l (ENSDORG00000028227)	Gm30191 (ENSDORG00000026074) #8	Zfp593 (ENSDORG00000028366) #10	E130218I03Rik (ENSDORG00000026750) #9	Cnksr1 (ENSDORG00000003511) #11	Catsper4 (ENSDORG00000003510) #12	Cep85 (ENSDORG00000011337) #14	Sh3bgrl3 (ENSDORG00000028188) #15	Ubxn11 (ENSDORG00000011339) #16	ENSDORG00000008372	ENSDORG00000008373 #18	ENSDORG00000027789	Lin28a (ENSDORG00000027432) #20	Dhdds (ENSDORG00000001776) #21	Hmgn2 (ENSDORG00000001787) #22	Rps6ka1 (ENSDORG00000007099) #23	Arid1a (ENSDORG00000002442) #24	Pigv (ENSDORG00000008243) #25	Zdhhc18 (ENSDORG00000012486) #26	Sfn (ENSDORG00000012487)	Gpn2 (ENSDORG00000005203) #27	ENSDORG00000005205 #28	Nr0b2 (ENSDORG00000023804) #29	Nudc (ENSDORG00000026035) #30	Kdf1 (ENSDORG00000023459) #31	ENSDORG00000030030	Tent5b (ENSDORG00000015648) #33	Slc9a1 (ENSDORG00000012211) #34	Wdtc1 (ENSDORG00000012982) #35	Tmem222 (ENSDORG00000009464) #36
Rodentia_A	ANCESTRAL SPECIES		ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Sciuridae	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	64																ENSSVLG00005021080 #22
Eurasian red squirrel	MODERN SPECIES	13	FBXL3 (ENSSVLG00005001661)	MYCBP2 (ENSSVLG00005001417)	ENSSVLG00005001299	SCEL (ENSSVLG00005001157)	ENSSVLG00005000937	EDNRB (ENSSVLG00005000870)	POU4F1 (ENSSVLG00005000848)	OBI1 (ENSSVLG00005000825)	RBM26 (ENSSVLG00005000683)	ENSSVLG00005000577	NDFIP2 (ENSSVLG00005000536)	ENSSVLG00005000512	ENSSVLG00005000442	SLITRK1 (ENSSVLG00005000428)	ENSSVLG00005000392	ENSSVLG00005000367 #22	SLITRK6 (ENSSVLG00005000356)	ENSSVLG00005000242	ENSSVLG00005000212	ENSSVLG00005020345	ENSSVLG00005020332	ENSSVLG00005020318	ENSSVLG00005019830	ENSSVLG00005019781	ENSSVLG00005019733	ENSSVLG00005019701	ENSSVLG00005019663	WASF3 (ENSSVLG00005019562)	ENSSVLG00005019373	CDK8 (ENSSVLG00005019288)	RNF6 (ENSSVLG00005019198)
Eurasian red squirrel	MODERN SPECIES	12	MBD5 (ENSSVLG00005003333)	EPC2 (ENSSVLG00005003372)	KIF5C (ENSSVLG00005003411)	LYPD6B (ENSSVLG00005003456)	LYPD6 (ENSSVLG00005003472)	MMADHC (ENSSVLG00005003507)	ENSSVLG00005003548	RND3 (ENSSVLG00005003560)	ENSSVLG00005003570	RBM43 (ENSSVLG00005003593)	ENSSVLG00005003611	ENSSVLG00005003622	TNFAIP6 (ENSSVLG00005003640)	RIF1 (ENSSVLG00005003716)	NEB (ENSSVLG00005004118)	ENSSVLG00005004729 #22	ENSSVLG00005004741	CACNB4 (ENSSVLG00005005336)	ENSSVLG00005007179	STAM2 (ENSSVLG00005007197)	FMNL2 (ENSSVLG00005007277)	ENSSVLG00005007428	PRPF40A (ENSSVLG00005007429)	ENSSVLG00005007524	RPRM (ENSSVLG00005007559)	ENSSVLG00005007594	KCNJ3 (ENSSVLG00005007729)	NR4A2 (ENSSVLG00005007787)	GPD2 (ENSSVLG00005007886)	ENSSVLG00005008042	ERMN (ENSSVLG00005008084)
Marmotini	ANCESTRAL SPECIES		ENSGT00940000158412	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT01090000260447	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Alpin marmot	MODERN SPECIES	11	SYN3 (ENSMMMG00000016926)	TIMP3 (ENSMMMG00000016936)	FBXO7 (ENSMMMG00000016939)	BPIFC (ENSMMMG00000016944)	RTCB (ENSMMMG00000016958)	PRDM4 (ENSMMMG00000016969)	PWP1 (ENSMMMG00000016996)	ABTB3 (ENSMMMG00000017014)	CRY1 (ENSMMMG00000017030)	MTERF2 (ENSMMMG00000017043)	TMEM263 (ENSMMMG00000017048)	RIC8B (ENSMMMG00000017060)	RFX4 (ENSMMMG00000017077)	ENSMMMG00000017101	POLR3B (ENSMMMG00000017120)	ENSMMMG00000017137 #22	TCP11L2 (ENSMMMG00000017141)	ENSMMMG00000017150	CKAP4 (ENSMMMG00000017154)	NUAK1 (ENSMMMG00000017169)	C12orf75 (ENSMMMG00000017181)	APPL2 (ENSMMMG00000017187)	WASHC4 (ENSMMMG00000017204)	ALDH1L2 (ENSMMMG00000017239)	NOPCHAP1 (ENSMMMG00000017266)	SLC41A2 (ENSMMMG00000017275)	CHST11 (ENSMMMG00000017290)	TXNRD1 (ENSMMMG00000017295)	ENSMMMG00000017345	NFYB (ENSMMMG00000017353)	HCFC2 (ENSMMMG00000017365)
Marmotini_b	ANCESTRAL SPECIES		ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00720000109135 #13	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT01090000260447	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35	ENSGT00390000007371 #36
Squirrel	MODERN SPECIES	74	TRIM63 (ENSSTOG00000004982)	PDIK1L (ENSSTOG00000004995)	FAM110D (ENSSTOG00000023295) #7	C1orf232 (ENSSTOG00000030099) #8	ZNF593 (ENSSTOG00000022153) #10	ZNF593OS (ENSSTOG00000032687) #9	CNKSR1 (ENSSTOG00000020206) #11	CATSPER4 (ENSSTOG00000028150) #12	ENSSTOG00000033310	CEP85 (ENSSTOG00000005057) #14	SH3BGRL3 (ENSSTOG00000005087) #15	UBXN11 (ENSSTOG00000005110) #16	CRYBG2 (ENSSTOG00000025229) #18	ENSSTOG00000004329 #20	DHDDS (ENSSTOG00000004335) #21	HMGN2 (ENSSTOG00000030691) #22	RPS6KA1 (ENSSTOG00000004355) #23	ENSSTOG00000022501 #24	ENSSTOG00000031355 #24	PIGV (ENSSTOG00000021148) #25	ZDHHC18 (ENSSTOG00000015208) #26	SFN (ENSSTOG00000015213)	GPN2 (ENSSTOG00000015216) #27	GPATCH3 (ENSSTOG00000015220) #28	NR0B2 (ENSSTOG00000024249) #29	NUDC (ENSSTOG00000021201) #30	KDF1 (ENSSTOG00000015233) #31	TENT5B (ENSSTOG00000022787) #33	ENSSTOG00000021677	ENSSTOG00000025429	SLC9A1 (ENSSTOG00000009815) #34
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00940000156072	ENSGT00940000156529	ENSGT00940000158412.j	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35	ENSGT00390000007371 #36
Naked mole-rat female	MODERN SPECIES	15	ENSHGLG00000011488	ENSHGLG00000012382	ENSHGLG00000016465	ENSHGLG00000046414	ITPRIPL2 (ENSHGLG00000037760)	COQ7 (ENSHGLG00000018991)	ENSHGLG00000018929	ENSHGLG00000010031	ENSHGLG00000040318	CCP110 (ENSHGLG00000018807)	VPS35L (ENSHGLG00000018818)	KNOP1 (ENSHGLG00000049260)	IQCK (ENSHGLG00000014331)	ENSHGLG00000049053	GPR139 (ENSHGLG00000034334)	ENSHGLG00000050561 #22	ENSHGLG00000009974	UMOD (ENSHGLG00000006685)	PDILT (ENSHGLG00000008450)	ACSM5 (ENSHGLG00000010732)	ENSHGLG00000011441	ENSHGLG00000037112	ENSHGLG00000012971	ENSHGLG00000006014	ENSHGLG00000049216	ENSHGLG00000007282	ENSHGLG00000049148	ENSHGLG00000007912	BFAR (ENSHGLG00000008907)	PARN (ENSHGLG00000010886)	MRTFB (ENSHGLG00000019009)
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00940000156072	ENSGT00940000156529	ENSGT00940000158412.j	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35	ENSGT00390000007371 #36
Hystricomorpha_b	ANCESTRAL SPECIES	7	ENSGT00940000156072	ENSGT00940000156529	ENSGT00940000158412.j	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a.n #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35	ENSGT00390000007371 #36
Long-tailed chinchilla	MODERN SPECIES	159	SLC30A2 (ENSCLAG00000010472)	TRIM63 (ENSCLAG00000009429)	PDIK1L (ENSCLAG00000010649)	FAM110D (ENSCLAG00000010682) #7	C1orf232 (ENSCLAG00000011904) #8	ZNF593 (ENSCLAG00000011066) #10	ZNF593OS (ENSCLAG00000010913) #9	CNKSR1 (ENSCLAG00000006569) #11	CEP85 (ENSCLAG00000008438) #14	UBXN11 (ENSCLAG00000009843) #16	SH3BGRL3 (ENSCLAG00000007979) #15	CRYBG2 (ENSCLAG00000009319) #18	ZNF683 (ENSCLAG00000014629)	LIN28A (ENSCLAG00000013508) #20	DHDDS (ENSCLAG00000009304) #21	HMGN2 (ENSCLAG00000008674) #22	RPS6KA1 (ENSCLAG00000012043) #23	ARID1A (ENSCLAG00000008499) #24	PIGV (ENSCLAG00000011353) #25	ZDHHC18 (ENSCLAG00000015099) #26	SFN (ENSCLAG00000018088)	GPN2 (ENSCLAG00000015368) #27	GPATCH3 (ENSCLAG00000012064) #28	NR0B2 (ENSCLAG00000012438) #29	NUDC (ENSCLAG00000008191) #30	KDF1 (ENSCLAG00000009636) #31	TENT5B (ENSCLAG00000010180) #33	SLC9A1 (ENSCLAG00000011250) #34	WDTC1 (ENSCLAG00000012710) #35	TMEM222 (ENSCLAG00000014379) #36	SYTL1 (ENSCLAG00000011750) #37
Guinea pig	MODERN SPECIES	25	SLC30A2 (ENSCPOG00000003475)	TRIM63 (ENSCPOG00000022922)	PDIK1L (ENSCPOG00000011692)	FAM110D (ENSCPOG00000039832) #7	C1orf232 (ENSCPOG00000030787) #8	ZNF593OS (ENSCPOG00000031348) #9	ZNF593 (ENSCPOG00000035949) #10	CNKSR1 (ENSCPOG00000007056) #11	CEP85 (ENSCPOG00000007069) #14	SH3BGRL3 (ENSCPOG00000007077) #15	UBXN11 (ENSCPOG00000024029) #16	CRYBG2 (ENSCPOG00000007086) #18	ZNF683 (ENSCPOG00000030245)	ENSCPOG00000019646 #20	DHDDS (ENSCPOG00000008087) #21	HMGN2 (ENSCPOG00000039945) #22	RPS6KA1 (ENSCPOG00000003945) #23	ENSCPOG00000021806	ARID1A (ENSCPOG00000010387) #24	ENSCPOG00000033509 #25	ZDHHC18 (ENSCPOG00000010395) #26	SFN (ENSCPOG00000035257)	GPN2 (ENSCPOG00000002848) #27	GPATCH3 (ENSCPOG00000010404) #28	NR0B2 (ENSCPOG00000010409) #29	NUDC (ENSCPOG00000010413) #30	KDF1 (ENSCPOG00000022999) #31	TENT5B (ENSCPOG00000032542) #33	SLC9A1 (ENSCPOG00000035897) #34	WDTC1 (ENSCPOG00000012347) #35	TMEM222 (ENSCPOG00000020198) #36
Lagomorpha	ANCESTRAL SPECIES	21	ENSGT00940000156529	ENSGT00940000158412	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a.m.a ##20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00950000182802.B.a.a.a.b.a.b ##22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35	ENSGT00390000007371 #36	ENSGT00940000160932 #37
Pika	MODERN SPECIES	3967	EXTL1 (ENSOPRG00000001366)	SLC30A2 (ENSOPRG00000001390)	TRIM63 (ENSOPRG00000001404)	PDIK1L (ENSOPRG00000001429)	FAM110D (ENSOPRG00000001433) #7	ZNF593 (ENSOPRG00000001439) #10	CNKSR1 (ENSOPRG00000001452) #11	ENSOPRG00000001487	CEP85 (ENSOPRG00000001515) #14	SH3BGRL3 (ENSOPRG00000001538) #15	ENSOPRG00000001544 #16	ENSOPRG00000001564 #18	ENSOPRG00000018194	LIN28A (ENSOPRG00000001591) #20	DHDDS (ENSOPRG00000001598) #21	HMGN2 (ENSOPRG00000001616) #22
Tree shrew	DUPLICATION
Tree shrew	DUPLICATION
Tree shrew	MODERN SPECIES	9946																ENSTBEG00000004536 #22
Tree shrew	MODERN SPECIES	3065								DHX57 (ENSTBEG00000005067)	GEMIN6 (ENSTBEG00000005016)	SRSF7 (ENSTBEG00000004604)	GALM (ENSTBEG00000003695)	HNRNPLL (ENSTBEG00000003191)	ATL2 (ENSTBEG00000002649)	CYP1B1 (ENSTBEG00000001857)	CDC42EP3 (ENSTBEG00000001606)	ENSTBEG00000001350 #22
Tree shrew	MODERN SPECIES	5532						EXOC6 (ENSTBEG00000003706)	ENSTBEG00000004431	CYP26A1 (ENSTBEG00000004596)	MYOF (ENSTBEG00000005063)	CEP55 (ENSTBEG00000006004)	ENSTBEG00000006397	ENSTBEG00000006747	PDE6C (ENSTBEG00000006962)	FRA10AC1 (ENSTBEG00000007620)	LGI1 (ENSTBEG00000008072)	ENSTBEG00000008293 #22	SLC35G1 (ENSTBEG00000008377)
Primates	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Strepsirrhini	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Lemuriformes	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Mouse lemur	MODERN SPECIES	22	OSGEP (ENSMICG00000047093)	KLHL33 (ENSMICG00000001522)	TEP1 (ENSMICG00000001497)	PARP2 (ENSMICG00000001491)	CCNB1IP1 (ENSMICG00000041696)	TTC5 (ENSMICG00000009403)	OR11H6 (ENSMICG00000033931)	ENSMICG00000029829	OR4K2 (ENSMICG00000042868)	OR4Q2 (ENSMICG00000002537)	ENSMICG00000042522	ENSMICG00000028340	ONECUT1 (ENSMICG00000029729)	WDR72 (ENSMICG00000003702)	UNC13C (ENSMICG00000047202)	ENSMICG00000046817 #22	RSL24D1 (ENSMICG00000036329)	RAB27A (ENSMICG00000002622)	PIGB (ENSMICG00000002623)	CCPG1 (ENSMICG00000035464)	PIERCE2 (ENSMICG00000030451)	ENSMICG00000032770	PYGO1 (ENSMICG00000035806)	ENSMICG00000046687	ENSMICG00000017806	ATOSA (ENSMICG00000011870)	ENSMICG00000044868	MYO5A (ENSMICG00000013517)	MYO5C (ENSMICG00000008381)	GNB5 (ENSMICG00000001204)	BCL2L10 (ENSMICG00000016608)
Haplorrhini	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	4960															ENSTSYG00000028787	ENSTSYG00000034784 #22	ENSTSYG00000032517	HNF4G (ENSTSYG00000002851)
Tarsier	MODERN SPECIES	4522															ENSTSYG00000032115	ENSTSYG00000030496 #22	CHEK2 (ENSTSYG00000003101)
Simiiformes	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Catarrhini	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a.m.a ##20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a ##22	ENSGT00990000203720.a.b.a.a.b	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00390000001376.bb.a.a	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Hominidae	ANCESTRAL SPECIES	3	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00620000087993.a.b #14	ENSGT00940000157260 #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a.m.a ##20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a ##22	ENSGT00950000182802.B.a.a.a.a.i.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00390000001376.bb.a.a	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Orangutan	MODERN SPECIES		C1orf232 (ENSPPYG00000031495) #8	ZNF593 (ENSPPYG00000001693) #10	ZNF593OS (ENSPPYG00000031753) #9	CNKSR1 (ENSPPYG00000001692) #11	CATSPER4 (ENSPPYG00000001691) #12	ENSPPYG00000008742	CEP85 (ENSPPYG00000001690) #14	SH3BGRL3 (ENSPPYG00000001689) #15	UBXN11 (ENSPPYG00000001688) #16	CD52 (ENSPPYG00000001687) #17	CRYBG2 (ENSPPYG00000001686) #18	ZNF683 (ENSPPYG00000001685)	LIN28A (ENSPPYG00000001684) ##20	ENSPPYG00000014748	DHDDS (ENSPPYG00000001683) #21	HMGN2 (ENSPPYG00000001682) #22	RPS6KA1 (ENSPPYG00000001681) #23	ARID1A (ENSPPYG00000001680) #24	PIGV (ENSPPYG00000001679) #25	ZDHHC18 (ENSPPYG00000001678) #26	SFN (ENSPPYG00000001677)	GPN2 (ENSPPYG00000001676) #27	GPATCH3 (ENSPPYG00000001675) #28	NR0B2 (ENSPPYG00000001674) #29	NUDC (ENSPPYG00000001673) #30	KDF1 (ENSPPYG00000001672) #31	TRNP1 (ENSPPYG00000036663) #32	TENT5B (ENSPPYG00000038825) #33	ENSPPYG00000033121	SLC9A1 (ENSPPYG00000001669) #34	ENSPPYG00000017919
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Olive baboon	MODERN SPECIES	14	ENSPANG00000046624	DBF4 (ENSPANG00000024063)	SLC25A40 (ENSPANG00000025953)	RUNDC3B (ENSPANG00000020857)	ABCB4 (ENSPANG00000017765)	CROT (ENSPANG00000017283)	TMEM243 (ENSPANG00000046663)	DMTF1 (ENSPANG00000011083)	ELAPOR2 (ENSPANG00000006018)	ENSPANG00000049327	GRM3 (ENSPANG00000020316)	ENSPANG00000030325	SEMA3D (ENSPANG00000010212)	ENSPANG00000043818	SEMA3A (ENSPANG00000010326)	ENSPANG00000034152 #22	ENSPANG00000034792	SEMA3E (ENSPANG00000014231)	PCLO (ENSPANG00000045135)	CACNA2D1 (ENSPANG00000011058)	HGF (ENSPANG00000016786)	SEMA3C (ENSPANG00000018074)	CD36 (ENSPANG00000024545)	GNAT3 (ENSPANG00000000495)	GNAI1 (ENSPANG00000018196)	ENSPANG00000048217	ENSPANG00000046036	MAGI2 (ENSPANG00000014539)	PHTF2 (ENSPANG00000008428)	TMEM60 (ENSPANG00000022872)	RSBN1L (ENSPANG00000024544)
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.b #22
Capuchin	MODERN SPECIES	215	CHST3 (ENSCCAG00000024311)	PSAP (ENSCCAG00000031808)	CDH23 (ENSCCAG00000024907)	ENSCCAG00000037741	SLC29A3 (ENSCCAG00000025265)	UNC5B (ENSCCAG00000037321)	PCBD1 (ENSCCAG00000026880)	SGPL1 (ENSCCAG00000022681)	ENSCCAG00000034244	TBATA (ENSCCAG00000022065)	ADAMTS14 (ENSCCAG00000034347)	PRF1 (ENSCCAG00000035533)	PALD1 (ENSCCAG00000030277)	NODAL (ENSCCAG00000032672)	EIF4EBP2 (ENSCCAG00000037637)	ENSCCAG00000008526 #22	LRRC20 (ENSCCAG00000023860)	NPFFR1 (ENSCCAG00000022929)	PPA1 (ENSCCAG00000032333)	SAR1A (ENSCCAG00000019722)	TYSND1 (ENSCCAG00000028714)	AIFM2 (ENSCCAG00000037129)	MACROH2A2 (ENSCCAG00000034612)	COL13A1 (ENSCCAG00000035276)	FAM241B (ENSCCAG00000032184)	TSPAN15 (ENSCCAG00000029490)	TACR2 (ENSCCAG00000022336)	ENSCCAG00000032765	HKDC1 (ENSCCAG00000027269)	SUPV3L1 (ENSCCAG00000033975)	VPS26A (ENSCCAG00000021117)
Bolivian squirrel monkey	MODERN SPECIES	228	CCDC103 (ENSSBOG00000030207)	GFAP (ENSSBOG00000020732)	KIF18B (ENSSBOG00000029491)	ENSSBOG00000029665	DCAKD (ENSSBOG00000027620)	ENSSBOG00000026353	PLCD3 (ENSSBOG00000026284)	ACBD4 (ENSSBOG00000029293)	HEXIM1 (ENSSBOG00000016824)	HEXIM2 (ENSSBOG00000021727)	FMNL1 (ENSSBOG00000030224)	SPATA32 (ENSSBOG00000028350)	MAP3K14 (ENSSBOG00000034027)	ARHGAP27 (ENSSBOG00000034994)	PLEKHM1 (ENSSBOG00000029615)	ENSSBOG00000029992 #22	ENSSBOG00000020588	RPRML (ENSSBOG00000009450)	GOSR2 (ENSSBOG00000026651)	WNT9B (ENSSBOG00000023584)	WNT3 (ENSSBOG00000032225)	NSF (ENSSBOG00000026872)
Euarchontoglires	DUPLICATION
Euarchontoglires	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.a ##22
Primates	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.a ##22
Haplorrhini	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.a ##22
Simiiformes	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.a ##22
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.a ##22
Mas night monkey	MODERN SPECIES	776						CROT (ENSANAG00000028065)	ABCB4 (ENSANAG00000022051)	ENSANAG00000028505	RUNDC3B (ENSANAG00000026218)	SLC25A40 (ENSANAG00000033214)	ENSANAG00000035490	ADAM22 (ENSANAG00000034950)	ENSANAG00000022466	STEAP4 (ENSANAG00000037956)	ZNF804B (ENSANAG00000035191)	ENSANAG00000019602 ##22	ENSANAG00000023207	ENSANAG00000022768	STEAP2 (ENSANAG00000029220)	CFAP69 (ENSANAG00000026248)	GTPBP10 (ENSANAG00000020267)	CLDN12 (ENSANAG00000019188)	CDK14 (ENSANAG00000034381)	MTERF1 (ENSANAG00000022640)	AKAP9 (ENSANAG00000035864)	CYP51A1 (ENSANAG00000036665)	LRRD1 (ENSANAG00000029885)	KRIT1 (ENSANAG00000034244)	ANKIB1 (ENSANAG00000038408)	GATAD1 (ENSANAG00000037321)	PEX1 (ENSANAG00000032378)
Tarsier	MODERN SPECIES	7338															NEK1 (ENSTSYG00000001460)	ENSTSYG00000025490 ##22
Euarchontoglires_A	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.a ##22
Glires	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.a ##22
Rodentia	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.a ##22
Rodentia_A	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.a ##22
Hystricomorpha	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.a ##22
Hystricomorpha_a	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.a ##22
Hystricomorpha_b	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.a ##22
Degu	MODERN SPECIES	78	SGK2 (ENSODEG00000014377)	ENSODEG00000015466	L3MBTL1 (ENSODEG00000014727)	ENSODEG00000016510	PTPRT (ENSODEG00000015540)	ENSODEG00000015100	ENSODEG00000016376	ENSODEG00000015660	ENSODEG00000014457	ENSODEG00000015358	EMILIN3 (ENSODEG00000014427)	LPIN3 (ENSODEG00000014914)	ENSODEG00000014057	ZHX3 (ENSODEG00000014535)	PLCG1 (ENSODEG00000015157)	ENSODEG00000020264 ##22	TOP1 (ENSODEG00000014384)	ENSODEG00000020525	DHX35 (ENSODEG00000015255)	ENSODEG00000014469	FAM83D (ENSODEG00000014195)	PPP1R16B (ENSODEG00000016247)	ACTR5 (ENSODEG00000016055)	SLC32A1 (ENSODEG00000014651)	RALGAPB (ENSODEG00000014771)	ENSODEG00000013713	LBP (ENSODEG00000013966)	KIAA1755 (ENSODEG00000013883)	TGM2 (ENSODEG00000014522)	RPRD1B (ENSODEG00000014735)	TTI1 (ENSODEG00000013968)
Tree shrew	MODERN SPECIES	8516																ENSTBEG00000007654 ##22
Euarchontoglires	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.b ##22
Euarchontoglires_A	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.a.b ##22
Tree shrew	MODERN SPECIES	5418														HELB (ENSTBEG00000008697)	IRAK3 (ENSTBEG00000008511)	ENSTBEG00000008422 ##22	TMBIM4 (ENSTBEG00000007979)
Laurasiatheria	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i #22
Laurasiatheria_a	DUPLICATION
Laurasiatheria_a	DUPLICATION
Laurasiatheria_a	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.a #22
Artiodactyla	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.a #22
Artiodactyla_a	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.a #22
Artiodactyla_b	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.a #22
Cetacea	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.a #22
Blue whale	MODERN SPECIES	6	SSC4D (ENSBMSG00010010259)	ENSBMSG00010010240	HSPB1 (ENSBMSG00010021026)	SRRM3 (ENSBMSG00010021008)	MDH2 (ENSBMSG00010020971)	STYXL1 (ENSBMSG00010020907)	TMEM120A (ENSBMSG00010020877)	POR (ENSBMSG00010020837)	RHBDD2 (ENSBMSG00010020799)	ENSBMSG00010020785	ENSBMSG00010020780	CCL24 (ENSBMSG00010020765)	CCL26 (ENSBMSG00010020754)	HIP1 (ENSBMSG00010020694)	ENSBMSG00010020565	ENSBMSG00010020459 #22	NSUN5 (ENSBMSG00010020440)	TRIM50 (ENSBMSG00010020388)	FKBP6 (ENSBMSG00010020326)	FZD9 (ENSBMSG00010020284)	BAZ1B (ENSBMSG00010020225)	BCL7B (ENSBMSG00010020176)	TBL2 (ENSBMSG00010020136)	MLXIPL (ENSBMSG00010019822)	VPS37D (ENSBMSG00010019763)	DNAJC30 (ENSBMSG00010019751)	BUD23 (ENSBMSG00010019711)	STX1A (ENSBMSG00010019671)	ABHD11 (ENSBMSG00010019563)	CLDN3 (ENSBMSG00010019496)	CLDN4 (ENSBMSG00010019478)
Pecora	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.a #22
Yarkand deer	MODERN SPECIES	9	ENSCHYG00000006144	ENSCHYG00000006128	NXPH1 (ENSCHYG00000006108)	ENSCHYG00000006079	ENSCHYG00000005872	ENSCHYG00000005812	ENSCHYG00000005763	RPA3 (ENSCHYG00000005704)	MIOS (ENSCHYG00000005648)	ENSCHYG00000005629	COL28A1 (ENSCHYG00000005593)	C1GALT1 (ENSCHYG00000005547)	ASNS (ENSCHYG00000005413)	ENSCHYG00000005370	TAC1 (ENSCHYG00000005255)	ENSCHYG00000005224 #22	ENSCHYG00000005190	DLX5 (ENSCHYG00000005150)	DLX6 (ENSCHYG00000005122)	SEM1 (ENSCHYG00000005072)	ENSCHYG00000004450	SLC25A13 (ENSCHYG00000022948)	DYNC1I1 (ENSCHYG00000022612)	PDK4 (ENSCHYG00000022505)	ASB4 (ENSCHYG00000022458)	ENSCHYG00000022429	PON2 (ENSCHYG00000022369)	PON3 (ENSCHYG00000022263)	PON1 (ENSCHYG00000022194)	PPP1R9A (ENSCHYG00000021788)	ENSCHYG00000021731
Suina	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.a #22
Chacoan peccary	MODERN SPECIES	107	ENSCWAG00000021724	TASL (ENSCWAG00000021731)	NR0B1 (ENSCWAG00000021733) ##29	ENSCWAG00000021734	MAGEB3 (ENSCWAG00000021738)	IL1RAPL1 (ENSCWAG00000021743)	ENSCWAG00000021751	ENSCWAG00000021756	ENSCWAG00000021764	ENSCWAG00000021767 ##35	PPP4R3C (ENSCWAG00000021770)	ENSCWAG00000000044	ENSCWAG00000000074	ENSCWAG00000000123	MAGEB18 (ENSCWAG00000000158)	ENSCWAG00000000180 #22	ARX (ENSCWAG00000000238)	POLA1 (ENSCWAG00000000286)	PCYT1B (ENSCWAG00000000445)	PDK3 (ENSCWAG00000000550)
Laurasiatheria_b	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.a #22
Carnivora	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.a #22
Caniformia	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.a #22
Canidae	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.a #22
Canis_lupus	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.a #22
Dog	MODERN SPECIES	22	SEL1L3 (ENSCAFG00845006276)	SLC34A2 (ENSCAFG00845006845)	ANAPC4 (ENSCAFG00845007014)	ZCCHC4 (ENSCAFG00845007308)	PI4K2B (ENSCAFG00845007474)	SEPSECS (ENSCAFG00845007550)	LGI2 (ENSCAFG00845007610)	CCDC149 (ENSCAFG00845007671)	SOD3 (ENSCAFG00845007800)	DHX15 (ENSCAFG00845007821)	PPARGC1A (ENSCAFG00845008311)	GBA3 (ENSCAFG00845008730)	ADGRA3 (ENSCAFG00845008840)	KCNIP4 (ENSCAFG00845009227)	PACRGL (ENSCAFG00845009809)	ENSCAFG00845010003 #22	SLIT2 (ENSCAFG00845010097)	ENSCAFG00845000335	LCORL (ENSCAFG00845000382)	NCAPG (ENSCAFG00845000445)	ENSCAFG00845000722	ENSCAFG00845000771	ENSCAFG00845000883	ENSCAFG00845000897	TMED11 (ENSCAFG00845000919)	ENSCAFG00845000939	ENSCAFG00845000968	FGFRL1 (ENSCAFG00845000982)	IDUA (ENSCAFG00845001029)	DGKQ (ENSCAFG00845001113)	TMEM175 (ENSCAFG00845001202)
Laurasiatheria_a	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Artiodactyla	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Suina	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Chacoan peccary	MODERN SPECIES	109	RS1 (ENSCWAG00000012171)	CDKL5 (ENSCWAG00000012250)	SCML2 (ENSCWAG00000012506)	RAI2 (ENSCWAG00000012729)	NHS (ENSCWAG00000012785)	REPS2 (ENSCWAG00000013113)	RBBP7 (ENSCWAG00000013432)	TXLNG (ENSCWAG00000013662)	SYAP1 (ENSCWAG00000013836)	CTPS2 (ENSCWAG00000013931)	S100G (ENSCWAG00000014113)	GRPR (ENSCWAG00000014142)	ENSCWAG00000014173	ZRSR2 (ENSCWAG00000014331)	CA5B (ENSCWAG00000014369)	ENSCWAG00000014482 #22	ENSCWAG00000014517	ACE2 (ENSCWAG00000014551)	BMX (ENSCWAG00000014724)	VEGFD (ENSCWAG00000014866)	PIGA (ENSCWAG00000015022)	ASB11 (ENSCWAG00000015177)	ASB9 (ENSCWAG00000015344)	MOSPD2 (ENSCWAG00000015465)	FANCB (ENSCWAG00000015559)	GLRA2 (ENSCWAG00000016032)	GEMIN8 (ENSCWAG00000016220)	GPM6B (ENSCWAG00000016254)	OFD1 (ENSCWAG00000016530)	ENSCWAG00000017861	RAB9A (ENSCWAG00000017898)
Artiodactyla_a	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Artiodactyla_b	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Pecora	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Yarkand deer	MODERN SPECIES	31	PLA2G5 (ENSCHYG00000004312)	ENSCHYG00000004304	ENSCHYG00000004290	ENSCHYG00000004262	PLA2G2E (ENSCHYG00000004226)	OTUD3 (ENSCHYG00000004205)	RNF186 (ENSCHYG00000004197)	TMCO4 (ENSCHYG00000004184)	ENSCHYG00000004172	NBL1 (ENSCHYG00000004159)	ENSCHYG00000004141	CAPZB (ENSCHYG00000004106)	ENSCHYG00000004089	MRTO4 (ENSCHYG00000004076)	EMC1 (ENSCHYG00000003769)	ENSCHYG00000003744 #22	UBR4 (ENSCHYG00000003524)	IFFO2 (ENSCHYG00000003462)	TAS1R2 (ENSCHYG00000003420)	PAX7 (ENSCHYG00000003410)	KLHDC7A (ENSCHYG00000003402)	IGSF21 (ENSCHYG00000003392)	ACTL8 (ENSCHYG00000003386)	ARHGEF10L (ENSCHYG00000003223)	RCC2 (ENSCHYG00000003175)	PADI6 (ENSCHYG00000003136)	PADI4 (ENSCHYG00000003013)	ENSCHYG00000002980	PADI2 (ENSCHYG00000002957)	SDHB (ENSCHYG00000002931)	ATP13A2 (ENSCHYG00000002652)
Cetacea	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Odontoceti	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Odontoceti_a	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Dolphin	MODERN SPECIES	2074													ZNF683 (ENSTTRG00000005677)	LIN28A (ENSTTRG00000005678) #20	DHDDS (ENSTTRG00000005679) #21	HMGN2 (ENSTTRG00000005681) #22
Laurasiatheria_b	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Carnivora	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Caniformia	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Canidae	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Red fox	MODERN SPECIES	8	SLC30A10 (ENSVVUG00000012860)	EPRS1 (ENSVVUG00000012841)	BPNT1 (ENSVVUG00000012834)	ENSVVUG00000012825	IARS2 (ENSVVUG00000012804)	RAB3GAP2 (ENSVVUG00000012742)	ENSVVUG00000012720	MARK1 (ENSVVUG00000010443)	ENSVVUG00000010404	ENSVVUG00000010400	MTARC2 (ENSVVUG00000010375)	ENSVVUG00000010371	ENSVVUG00000010364	HLX (ENSVVUG00000010359)	DUSP10 (ENSVVUG00000010349)	ENSVVUG00000010341 #22	ENSVVUG00000010329 #20	HHIPL2 (ENSVVUG00000010307)	TAF1A (ENSVVUG00000010281)	MIA3 (ENSVVUG00000010238)	AIDA (ENSVVUG00000010215)	BROX (ENSVVUG00000010206)	FAM177B (ENSVVUG00000010199)	ENSVVUG00000010193	FAM78B (ENSVVUG00000010186)	UCK2 (ENSVVUG00000010176)	ENSVVUG00000010169	ENSVVUG00000010155	MGST3 (ENSVVUG00000010150)	LRRC52 (ENSVVUG00000010146)	RXRG (ENSVVUG00000010121)
Canis_lupus	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Dog	MODERN SPECIES	14	ENSCAFG00845026699	ENSCAFG00845026714	ITM2B (ENSCAFG00845006529)	MED4 (ENSCAFG00845006629)	NUDT15 (ENSCAFG00845006770)	SUCLA2 (ENSCAFG00845006827)	ENSCAFG00845006932	ENSCAFG00845006950	ENSCAFG00845006976	HTR2A (ENSCAFG00845007028)	ESD (ENSCAFG00845007071)	LRCH1 (ENSCAFG00845007392)	RUBCNL (ENSCAFG00845007831)	LRRC63 (ENSCAFG00845008059)	LCP1 (ENSCAFG00845008232)	ENSCAFG00845008378 #22	CPB2 (ENSCAFG00845008419)	ZC3H13 (ENSCAFG00845008518)	SIAH3 (ENSCAFG00845008706)	CBY2 (ENSCAFG00845008753)	ERICH6B (ENSCAFG00845008814)	COG3 (ENSCAFG00845008880)	ENSCAFG00845009121	TPT1 (ENSCAFG00845009258)	GTF2F2 (ENSCAFG00845009386)	KCTD4 (ENSCAFG00845009422)	ENSCAFG00845009469	NUFIP1 (ENSCAFG00845009615)	TSC22D1 (ENSCAFG00845009733)	SERP2 (ENSCAFG00845009825)	SMIM2 (ENSCAFG00845009884)
Felidae	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Panthera	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.c.b #22
Tiger	MODERN SPECIES	111	PDIK1L (ENSPTIG00000015220)	ENSPTIG00000015215 #8	ZNF593 (ENSPTIG00000015187) #10	ZNF593OS (ENSPTIG00000015167) #9	ENSPTIG00000015163 #11	ENSPTIG00000015149 #11	CATSPER4 (ENSPTIG00000015133) #12	CEP85 (ENSPTIG00000015092) #14	SH3BGRL3 (ENSPTIG00000015073) #15	UBXN11 (ENSPTIG00000015065) #16	CD52 (ENSPTIG00000015054) #17	ENSPTIG00000015043 #18	ZNF683 (ENSPTIG00000015019)	LIN28A (ENSPTIG00000015007) #20	DHDDS (ENSPTIG00000014974) #21	HMGN2 (ENSPTIG00000014958) #22	RPS6KA1 (ENSPTIG00000014844) #23	ARID1A (ENSPTIG00000014743) #24	PIGV (ENSPTIG00000014722) #25	ZDHHC18 (ENSPTIG00000014713) #26	SFN (ENSPTIG00000009275)	ENSPTIG00000014705 #27	GPATCH3 (ENSPTIG00000014693) #28	NR0B2 (ENSPTIG00000014689) #29	NUDC (ENSPTIG00000014669) #30	KDF1 (ENSPTIG00000014656) #31	ENSPTIG00000014652	TENT5B (ENSPTIG00000014641) #33	SLC9A1 (ENSPTIG00000014613) #34	WDTC1 (ENSPTIG00000014587) #35	TMEM222 (ENSPTIG00000014570) #36
Laurasiatheria_a	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Laurasiatheria_b	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Carnivora	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Felidae	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Panthera	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Panthera_a	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
leopard	MODERN SPECIES	15	ENSPPRG00000017213	OR5AC2 (ENSPPRG00000008476)	ENSPPRG00000008103	ENSPPRG00000007292	ENSPPRG00000006993	ENSPPRG00000005494	ENSPPRG00000005088	OR5K4 (ENSPPRG00000016988)	OR5K3 (ENSPPRG00000016978)	CLDND1 (ENSPPRG00000003725)	GPR15 (ENSPPRG00000016756)	CPOX (ENSPPRG00000002075)	ENSPPRG00000001675	ST3GAL6 (ENSPPRG00000001553)	DCBLD2 (ENSPPRG00000000209)	ENSPPRG00000016601 #22	COL8A1 (ENSPPRG00000017511)	CMSS1 (ENSPPRG00000016767)	FILIP1L (ENSPPRG00000014344)	ENSPPRG00000012879	TBC1D23 (ENSPPRG00000011883)	NIT2 (ENSPPRG00000009685)	TOMM70 (ENSPPRG00000009283)	ENSPPRG00000016133	TMEM45A (ENSPPRG00000008950)	ADGRG7 (ENSPPRG00000008062)	TFG (ENSPPRG00000006943)	ABI3BP (ENSPPRG00000004230)	IMPG2 (ENSPPRG00000002457)	SENP7 (ENSPPRG00000001509)	ENSPPRG00000012526
Cat	MODERN SPECIES	252	ENSFCAG00000051042	ENSFCAG00000026303	ENSFCAG00000039628	PRR32 (ENSFCAG00000009525)	DCAF12L1 (ENSFCAG00000041282)	DCAF12L2 (ENSFCAG00000042396)	ENSFCAG00000001211	ENSFCAG00000049757	TENM1 (ENSFCAG00000008355)	SH2D1A (ENSFCAG00000008354)	STAG2 (ENSFCAG00000027633)	XIAP (ENSFCAG00000012037)	THOC2 (ENSFCAG00000008301)	GRIA3 (ENSFCAG00000008299)	ENSFCAG00000022782	ENSFCAG00000029778 #22	C1GALT1C1 (ENSFCAG00000010443)	MCTS1 (ENSFCAG00000038539)	CUL4B (ENSFCAG00000027979)	LAMP2 (ENSFCAG00000004533)	ENSFCAG00000050883	ATP1B4 (ENSFCAG00000041735)	TMEM255A (ENSFCAG00000014940)	ZBTB33 (ENSFCAG00000014939)	ENSFCAG00000049865	ENSFCAG00000049711	ENSFCAG00000053584	NKAP (ENSFCAG00000004392)	ENSFCAG00000048387	ENSFCAG00000036619	ENSFCAG00000025700
Caniformia	ANCESTRAL SPECIES	2	ENSGT00940000158412	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00620000087993.a.b #14	ENSGT00940000157260.f #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.d #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00940000158412	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00620000087993.a.b #14	ENSGT00940000157260.f #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000163172	ENSGT00940000153295.a #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.d #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a.b	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
Ursidae	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Ursus	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Polar bear	MODERN SPECIES	91																ENSUMAG00000021187 #22	FUNDC1 (ENSUMAG00000021185)	ENSUMAG00000021181	KDM6A (ENSUMAG00000011808)	ENSUMAG00000010469	ENSUMAG00000010460	SLC9A7 (ENSUMAG00000010328)	RP2 (ENSUMAG00000010302)	JADE3 (ENSUMAG00000010296)	RGN (ENSUMAG00000010289)	NDUFB11 (ENSUMAG00000010283)	UBA1 (ENSUMAG00000009061)	CDK16 (ENSUMAG00000008275)	ENSUMAG00000008147	ENSUMAG00000008141	ZNF157 (ENSUMAG00000008138)
American black bear	MODERN SPECIES	2211																ENSUAMG00000009387 #22	FUNDC1 (ENSUAMG00000009386)
Giant Panda	MODERN SPECIES	9	ENSAMEG00000019621	TTI2 (ENSAMEG00000002835)	MAK16 (ENSAMEG00000002852)	FUT10 (ENSAMEG00000002880)	NRG1 (ENSAMEG00000014160)	WRN (ENSAMEG00000000475)	PURG (ENSAMEG00000019352)	TEX15 (ENSAMEG00000024323)	PPP2CB (ENSAMEG00000028915)	UBXN8 (ENSAMEG00000001600)	GSR (ENSAMEG00000001554)	SMIM18 (ENSAMEG00000024577)	ENSAMEG00000031419	ENSAMEG00000001537	ENSAMEG00000001522	ENSAMEG00000019327 #22	ENSAMEG00000001497	MBOAT4 (ENSAMEG00000001495)	ENSAMEG00000024146	ENSAMEG00000001483	ENSAMEG00000006062	ENSAMEG00000005992	PPP1R3B (ENSAMEG00000019964)	ERI1 (ENSAMEG00000016002)	MFHAS1 (ENSAMEG00000000508)	ENSAMEG00000027636	ENSAMEG00000030052	ENSAMEG00000007160	ENSAMEG00000007166	ENSAMEG00000029087	C8orf48 (ENSAMEG00000019769)
Mustelinae	DUPLICATION
Mustelinae	DUPLICATION
Mustelinae	ANCESTRAL SPECIES	36													ENSGT00940000158708.b	ENSGT00940000158487	ENSGT00940000159270	ENSGT00950000182802.B.a.a.a.a.i.d.a.a #22	ENSGT00550000074827	ENSGT00390000011314	ENSGT00940000157796	ENSGT00940000159422	ENSGT00940000153533.a	ENSGT00940000155707	ENSGT00940000160380	ENSGT00950000182989.A	ENSGT00940000157327	ENSGT00940000160977	ENSGT00940000157737	ENSGT00940000159819	ENSGT00950000182965.a.b.b.b.h	ENSGT00940000160227	ENSGT00940000157599
Ferret	MODERN SPECIES	576													CHRNB4 (ENSMPUG00000010868)	CHRNA3 (ENSMPUG00000010873)	CHRNA5 (ENSMPUG00000010876)	ENSMPUG00000019921 #22	PSMA4 (ENSMPUG00000010971)	HYKK (ENSMPUG00000010975)	IREB2 (ENSMPUG00000010978)	ENSMPUG00000010986	CRABP1 (ENSMPUG00000010990)	SKIC8 (ENSMPUG00000011014)	ENSMPUG00000019922	DNAJA4 (ENSMPUG00000011024)	ACSBG1 (ENSMPUG00000011069)	ENSMPUG00000011142
American mink	MODERN SPECIES	199													CHRNB4 (ENSNVIG00000009721)	CHRNA3 (ENSNVIG00000009760)	CHRNA5 (ENSNVIG00000009811)	ENSNVIG00000009818 #22	PSMA4 (ENSNVIG00000009833)	HYKK (ENSNVIG00000009887)	IREB2 (ENSNVIG00000009909)	CRABP1 (ENSNVIG00000009940)	ENSNVIG00000009961	DNAJA4 (ENSNVIG00000010017)	ACSBG1 (ENSNVIG00000010039)	IDH3A (ENSNVIG00000010076)	CIB2 (ENSNVIG00000010089)	SH2D7 (ENSNVIG00000010097)	TBC1D2B (ENSNVIG00000010110)	ADAMTS7 (ENSNVIG00000010159)	MORF4L1 (ENSNVIG00000011337)	CTSH (ENSNVIG00000011460)	RASGRF1 (ENSNVIG00000011490)
Mustelinae	ANCESTRAL SPECIES		ENSGT00940000158412	ENSGT00950000183056.A.a #7	ENSGT00530000067301 #8	ENSGT00390000004173 #10	ENSGT01070000253847 #9	ENSGT00940000159599 #11	ENSGT00940000161879 #12	ENSGT00620000087993.a.b #14	ENSGT00940000157260.f #15	ENSGT00520000055567.b #16	ENSGT00860000134004 #17	ENSGT00940000157740 #18	ENSGT00940000164781 #19	ENSGT00940000153295.a #20	ENSGT00390000007879 #21	ENSGT00950000182802.B.a.a.a.a.i.d.a.b #22	ENSGT00940000159314 #23	ENSGT00940000155194 #24	ENSGT00390000013174 #25	ENSGT00940000156585 #26	ENSGT01090000260040.b.b.b.a.b	ENSGT00950000183172.B #27	ENSGT00390000004191 #28	ENSGT00390000015719.c #29	ENSGT00940000155361 #30	ENSGT00390000016565 #31	ENSGT00900000143263	ENSGT00390000017418 #32	ENSGT00940000160747 #33	ENSGT00940000156338 #34	ENSGT00950000182900.B #35
American mink	MODERN SPECIES	9	PDK1L (ENSNVIG00000023591)	FAM110D (ENSNVIG00000023596) #7	C1orf232 (ENSNVIG00000023599) #8	ZNF593 (ENSNVIG00000023603) #10	ZNF593OS (ENSNVIG00000023604) #9	CNKSR1 (ENSNVIG00000023607) #11	CATSPER4 (ENSNVIG00000023629) #12	CEP85 (ENSNVIG00000023633) #14	SH3BGRL3 (ENSNVIG00000023641) #15	UBXN11 (ENSNVIG00000023643) #16	CD52 (ENSNVIG00000023648) #17	E9PIR9 (ENSNVIG00000023650) #18	ENSNVIG00000023659 #19	LIN28A (ENSNVIG00000023660) #20	DHDDS (ENSNVIG00000023662) #21	ENSNVIG00000023682 #22	RPS6KA1 (ENSNVIG00000023687) #23	ARID1A (ENSNVIG00000023700) #24	PIGV (ENSNVIG00000023704) #25	SFN (ENSNVIG00000023710)	GPN2 (ENSNVIG00000023711) #27	GPATCH3 (ENSNVIG00000023714) #28	NR0B2 (ENSNVIG00000023716) #29	NUDC (ENSNVIG00000023719) #30	CA172 (ENSNVIG00000023720) #31	ENSNVIG00000023721	TRNP1 (ENSNVIG00000023723) #32	TENT5B (ENSNVIG00000023724) #33	SLC9A1 (ENSNVIG00000023725) #34	WDTC1 (ENSNVIG00000023727) #35	TMEM222 (ENSNVIG00000023737) #36
Mustelinae	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d.b #22
Ferret	MODERN SPECIES	185	SOCS2 (ENSMPUG00000007443)	ENSMPUG00000018718	CRADD (ENSMPUG00000007433)	ENSMPUG00000007427	ENSMPUG00000007413	ENSMPUG00000007401	CEP83 (ENSMPUG00000007387)	TMCC3 (ENSMPUG00000007383)	NDUFA12 (ENSMPUG00000007354)	NR2C1 (ENSMPUG00000007335)	FGD6 (ENSMPUG00000007314)	VEZT (ENSMPUG00000007304)	METAP2 (ENSMPUG00000007214)	USP44 (ENSMPUG00000007203)	NTN4 (ENSMPUG00000007194)	ENSMPUG00000018714 #22	SNRPF (ENSMPUG00000007176)	CCDC38 (ENSMPUG00000007131)	AMDHD1 (ENSMPUG00000007121)	HAL (ENSMPUG00000007091)	LTA4H (ENSMPUG00000007076)	ENSMPUG00000018712	ELK3 (ENSMPUG00000007067)	CDK17 (ENSMPUG00000007057)	ENSMPUG00000007052	ENSMPUG00000006986	NEDD1 (ENSMPUG00000006970)	COL5A3 (ENSMPUG00000006933)	RDH8 (ENSMPUG00000006924)	ENSMPUG00000006889	SHFL (ENSMPUG00000006886)
American mink	DUPLICATION
American mink	MODERN SPECIES	1004																ENSNVIG00000007767 #22
American mink	MODERN SPECIES	30	LRP2BP (ENSNVIG00000005813)	ANKRD37 (ENSNVIG00000005829)	UFSP2 (ENSNVIG00000005849)	CD047 (ENSNVIG00000005884)	ENSNVIG00000005900	PDLI3 (ENSNVIG00000005921)	SORBS2 (ENSNVIG00000005995)	ENSNVIG00000006303	TLR3 (ENSNVIG00000006317)	ENSNVIG00000006344	CYP4V2 (ENSNVIG00000006460)	GTF2E2 (ENSNVIG00000006478)	SMIM18 (ENSNVIG00000006483)	RBPMS (ENSNVIG00000006491)	ENSNVIG00000006516	ENSNVIG00000006524 #22	DCTN6 (ENSNVIG00000006540)	MBOAT4 (ENSNVIG00000006563)	LEPROTL1 (ENSNVIG00000006579)	SARAF (ENSNVIG00000006647)	DUSP4 (ENSNVIG00000006667)	TNKS (ENSNVIG00000006675)	ENSNVIG00000006731	PPR3B (ENSNVIG00000006738)	ERI1 (ENSNVIG00000006752)	MFHAS1 (ENSNVIG00000006769)	PRAG1 (ENSNVIG00000006792)	LONRF1 (ENSNVIG00000006805)	ENSNVIG00000006826	TRMT9B (ENSNVIG00000006837)	DLC1 (ENSNVIG00000006868)
Canidae	DUPLICATION
Canidae	DUPLICATION
Canidae	DUPLICATION
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000162328	ENSGT00940000154645.B	ENSGT00940000163010	ENSGT00940000160451	ENSGT00950000183047.d	ENSGT00940000158829	ENSGT00390000009787	ENSGT00950000182888.a.a.a.j.b	ENSGT00950000182888.a.a.a.j.a	ENSGT00390000011980.b.b	ENSGT00940000161643	ENSGT00390000006784	ENSGT00390000008371.b	ENSGT00390000004321	ENSGT00900000141021.b.a	ENSGT00950000182802.B.a.a.a.a.i.d.c.a.a #22	ENSGT00390000011500	ENSGT01060000248556.A.a.a.a	ENSGT00390000013112	ENSGT00390000008565.a	ENSGT00940000155841	ENSGT00390000005742	ENSGT00390000004067	ENSGT00390000006287	ENSGT00940000154043.A	ENSGT00940000158797	ENSGT00390000016537	ENSGT00940000160987	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00940000156902
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00960000189405	ENSGT00940000162328	ENSGT00940000154645.B	ENSGT00940000160451	ENSGT00950000183047.d	ENSGT00940000158829	ENSGT00390000009787	ENSGT00950000182888.a.a.a.j.b	ENSGT00950000182888.a.a.a.j.a	ENSGT00390000011980.b.b	ENSGT00940000161643	ENSGT00390000006784	ENSGT00390000008371.b	ENSGT00390000004321	ENSGT00900000141021.b.a	ENSGT00950000182802.B.a.a.a.a.i.d.c.a.a #22	ENSGT00390000011500	ENSGT01060000248556.A.a.a.a	ENSGT00390000013112	ENSGT00390000008565.a	ENSGT00940000155841	ENSGT00390000005742	ENSGT00390000004067	ENSGT00390000006287	ENSGT00940000154043.A	ENSGT00940000158797	ENSGT00390000016537	ENSGT00940000160987	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00940000156902
Dingo	MODERN SPECIES	327	ENSCAFG00020023994	ENSCAFG00020023990	NCS1 (ENSCAFG00020023988)	GPR107 (ENSCAFG00020023954)	FNBP1 (ENSCAFG00020023720)	USP20 (ENSCAFG00020023699)	C9orf78 (ENSCAFG00020023693)	TOR1A (ENSCAFG00020023689)	TOR1B (ENSCAFG00020023687)	PTGES (ENSCAFG00020023680)	PRRX2 (ENSCAFG00020023669)	ASB6 (ENSCAFG00020023653)	NTMT1 (ENSCAFG00020023651)	ENSCAFG00020023649	IER5L (ENSCAFG00020023645)	ENSCAFG00020023644 #22	ENSCAFG00020023642	ENSCAFG00020023640	CRAT (ENSCAFG00020023635)	DOLPP1 (ENSCAFG00020023632)	MIGA2 (ENSCAFG00020023580)	SH3GLB2 (ENSCAFG00020023573)	NUP188 (ENSCAFG00020023102)	DOLK (ENSCAFG00020023027)	PHYHD1 (ENSCAFG00020023006)	LRRC8A (ENSCAFG00020022997)	KYAT1 (ENSCAFG00020022992)	SPOUT1 (ENSCAFG00020022980)	ENDOG (ENSCAFG00020022974)	TBC1D13 (ENSCAFG00020022951)	ZER1 (ENSCAFG00020022864)
Dog	MODERN SPECIES	37	ASS1 (ENSCAFG00845021573)	ENSCAFG00845021728	ENSCAFG00845021859	GPR107 (ENSCAFG00845021950)	FNBP1 (ENSCAFG00845022336)	USP20 (ENSCAFG00845023043)	C9orf78 (ENSCAFG00845023258)	TOR1A (ENSCAFG00845023305)	TOR1B (ENSCAFG00845023333)	PTGES (ENSCAFG00845023377)	PRRX2 (ENSCAFG00845023411)	ASB6 (ENSCAFG00845023463)	NTMT1 (ENSCAFG00845023587)	C9orf50 (ENSCAFG00845023660)	IER5L (ENSCAFG00845023709)	ENSCAFG00845023733 #22	PTPA (ENSCAFG00845023830)	CRAT (ENSCAFG00845024111)	DOLPP1 (ENSCAFG00845024281)	MIGA2 (ENSCAFG00845024378)	SH3GLB2 (ENSCAFG00845024630)	NUP188 (ENSCAFG00845025077)	DOLK (ENSCAFG00845025311)	PHYHD1 (ENSCAFG00845025344)	LRRC8A (ENSCAFG00845025448)	KYAT1 (ENSCAFG00845025617)	SPOUT1 (ENSCAFG00845025964)	ENDOG (ENSCAFG00845026038)	TBC1D13 (ENSCAFG00845026099)	ZER1 (ENSCAFG00845026245)	ZDHHC12 (ENSCAFG00845026605)
Red fox	MODERN SPECIES	77	ASS1 (ENSVVUG00000027500)	ENSVVUG00000027466	GPR107 (ENSVVUG00000027461)	ENSVVUG00000027457	FNBP1 (ENSVVUG00000027452)	USP20 (ENSVVUG00000027434)	CUNH9orf78 (ENSVVUG00000027415)	TOR1A (ENSVVUG00000027408)	TOR1B (ENSVVUG00000027404)	PTGES (ENSVVUG00000027400)	PRRX2 (ENSVVUG00000027397)	ASB6 (ENSVVUG00000027390)	NTMT1 (ENSVVUG00000027389)	ENSVVUG00000027383	ENSVVUG00000027374	ENSVVUG00000027372 #22	PTPA (ENSVVUG00000027345)	CRAT (ENSVVUG00000027026)	DOLPP1 (ENSVVUG00000027005)	MIGA2 (ENSVVUG00000026980)	SH3GLB2 (ENSVVUG00000026951)	NUP188 (ENSVVUG00000026171)	DOLK (ENSVVUG00000026142)	PHYHD1 (ENSVVUG00000026059)	LRRC8A (ENSVVUG00000026053)	KYAT1 (ENSVVUG00000026017)	SPOUT1 (ENSVVUG00000025999)	ENDOG (ENSVVUG00000025998)	TBC1D13 (ENSVVUG00000025967)	ZER1 (ENSVVUG00000025838)	ZDHHC12 (ENSVVUG00000025833)
Canidae	ANCESTRAL SPECIES	7	ENSGT00940000154668	ENSGT00940000160020	ENSGT00390000006096.a.b	ENSGT00530000063923.a	ENSGT00390000003050	ENSGT00500000044987	ENSGT00940000153432.B	ENSGT00390000004624.a.a	ENSGT00940000158907	ENSGT00390000001442	ENSGT00950000182945.b.b.nb.a	ENSGT00940000158207	ENSGT00940000158944	ENSGT00930000151460	ENSGT00950000183129.b.a	ENSGT00950000182802.B.a.a.a.a.i.d.c.a.b #22	ENSGT00940000153731.a.a	ENSGT00390000016326	ENSGT00940000157646	ENSGT00940000156303	ENSGT00510000047669	ENSGT00940000157072	ENSGT00390000013835	ENSGT00940000156244	ENSGT00940000161247	ENSGT00940000157724	ENSGT00940000154091.a.a	ENSGT00390000018810	ENSGT00940000161886	ENSGT00940000165308	ENSGT00400000023784
Canis_lupus	ANCESTRAL SPECIES	12	ENSGT00940000154668	ENSGT00940000160020	ENSGT00390000006096.a.b	ENSGT00530000063923.a	ENSGT00390000003050	ENSGT00500000044987	ENSGT00940000153432.B	ENSGT00390000004624.a.a	ENSGT00940000158907	ENSGT00390000001442	ENSGT00950000182945.b.b.nb.a	ENSGT00940000158207	ENSGT00940000158944	ENSGT00930000151460	ENSGT00950000183129.b.a	ENSGT00950000182802.B.a.a.a.a.i.d.c.a.b #22	ENSGT00940000153731.a.a	ENSGT00940000160677.b	ENSGT00390000016326	ENSGT00940000157646	ENSGT00390000018085.a.b.b	ENSGT00940000156303	ENSGT00510000047669	ENSGT00940000157072	ENSGT00390000013835	ENSGT00940000156244	ENSGT00940000161247	ENSGT00940000157724	ENSGT00940000154091.a.a	ENSGT00390000018810	ENSGT00940000161886
Dog	MODERN SPECIES	32	HMGCS1 (ENSCAFG00845001633)	CCL28 (ENSCAFG00845001613)	TMEM267 (ENSCAFG00845001595)	ENSCAFG00845001580	C5orf34 (ENSCAFG00845001554)	PAIP1 (ENSCAFG00845001471)	NNT (ENSCAFG00845001372)	ENSCAFG00845001341	ENSCAFG00845001327	FGF10 (ENSCAFG00845001301)	MRPS30 (ENSCAFG00845001286)	HCN1 (ENSCAFG00845001252)	EMB (ENSCAFG00845001102)	ENSCAFG00845001054	PARP8 (ENSCAFG00845000833)	ENSCAFG00845000667 #22	ISL1 (ENSCAFG00845000645)	ENSCAFG00845000617	ITGA1 (ENSCAFG00845000521)	ENSCAFG00845000486	ITGA2 (ENSCAFG00845000432)	ENSCAFG00845000390	ENSCAFG00845000374	FST (ENSCAFG00845000357)	ENSCAFG00845000328	ARL15 (ENSCAFG00845000266)	ENSCAFG00845011675	SNX18 (ENSCAFG00845011602)	ENSCAFG00845011529	ESM1 (ENSCAFG00845011480)	GZMK (ENSCAFG00845011436)
Dingo	MODERN SPECIES	324	NIM1K (ENSCAFG00020022511)	HMGCS1 (ENSCAFG00020022512)	CCL28 (ENSCAFG00020022514)	ENSCAFG00020022515	C5orf34 (ENSCAFG00020022516)	ENSCAFG00020022518	PAIP1 (ENSCAFG00020022519)	NNT (ENSCAFG00020022539)	FGF10 (ENSCAFG00020023081)	MRPS30 (ENSCAFG00020023088)	ENSCAFG00020023093	HCN1 (ENSCAFG00020023097)	EMB (ENSCAFG00020023108)	ENSCAFG00020023110	PARP8 (ENSCAFG00020023116)	ENSCAFG00020023152 #22	ISL1 (ENSCAFG00020023153)	ENSCAFG00020023158	ITGA1 (ENSCAFG00020023171)	PELO (ENSCAFG00020023234)	ENSCAFG00020023235	ITGA2 (ENSCAFG00020023241)	MOCS2 (ENSCAFG00020023291)	FST (ENSCAFG00020023298)	ENSCAFG00020023309	ARL15 (ENSCAFG00020023332)	HSPB3 (ENSCAFG00020023339)	SNX18 (ENSCAFG00020023340)	ENSCAFG00020023344	ENSCAFG00020023347	ESM1 (ENSCAFG00020023350)
Red fox	MODERN SPECIES	131	NIM1K (ENSVVUG00000025384)	HMGCS1 (ENSVVUG00000025389)	CCL28 (ENSVVUG00000025397)	TMEM267 (ENSVVUG00000025399)	CUNH5orf34 (ENSVVUG00000025400)	PAIP1 (ENSVVUG00000025408)	NNT (ENSVVUG00000025440)	ENSVVUG00000025445	FGF10 (ENSVVUG00000025452)	MRPS30 (ENSVVUG00000025454)	ENSVVUG00000025455	HCN1 (ENSVVUG00000025456)	ENSVVUG00000025461	EMB (ENSVVUG00000025462)	PARP8 (ENSVVUG00000025465)	ENSVVUG00000025487 #22	ISL1 (ENSVVUG00000025489)	ENSVVUG00000025496	PELO (ENSVVUG00000025499)	ITGA1 (ENSVVUG00000025501)	ENSVVUG00000025502	ITGA2 (ENSVVUG00000025507)	MOCS2 (ENSVVUG00000025658)	ENSVVUG00000025661	FST (ENSVVUG00000025662)	NDUFS4 (ENSVVUG00000025663)	ARL15 (ENSVVUG00000025666)	ENSVVUG00000025670
Canidae	ANCESTRAL SPECIES	6	ENSGT00940000153769.C	ENSGT00940000154708.nb.b	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00940000162903.f	ENSGT00390000011354	ENSGT00390000017590.i.a	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00390000013639	ENSGT00940000154406.b.h	ENSGT00940000155080	ENSGT00940000164728	ENSGT00940000163741	ENSGT00950000182802.B.a.a.a.a.i.d.c.b #22	ENSGT00940000155081.D	ENSGT00390000002581	ENSGT00940000158276	ENSGT00940000157935	ENSGT00940000157565	ENSGT00390000009155	ENSGT00940000155884	ENSGT00940000159583	ENSGT00390000018730.B	ENSGT00940000155134	ENSGT00940000155933.b.a	ENSGT00940000154353.A	ENSGT00940000154353.B.`b	ENSGT00940000162601.s	ENSGT00940000162097
Canis_lupus	ANCESTRAL SPECIES	11	ENSGT00940000155008.C	ENSGT00390000016954	ENSGT00390000011354	ENSGT00390000017590.i.a	ENSGT00940000155064	ENSGT00390000009790	ENSGT00940000157134	ENSGT00390000008281.p	ENSGT00390000013639	ENSGT00940000154406.b.h	ENSGT00940000155080	ENSGT00940000161804.c.a.b	ENSGT00940000163741	ENSGT00390000010355.l	ENSGT00940000166528.b	ENSGT00950000182802.B.a.a.a.a.i.d.c.b #22	ENSGT00940000155081.D	ENSGT00390000002581	ENSGT00940000158276	ENSGT00940000157935	ENSGT00940000157565	ENSGT00390000009155	ENSGT00940000155884	ENSGT00940000159583	ENSGT00390000018730.B	ENSGT00940000155134	ENSGT00940000155933.b.a	ENSGT00940000154353.A	ENSGT00940000154353.B.`b	ENSGT00940000162601.s	ENSGT00940000162097
Dingo	MODERN SPECIES	370															ENSCAFG00020008110	ENSCAFG00020008127 #22	ENSCAFG00020008140	ENSCAFG00020008167	ENSCAFG00020008198	LMBRD1 (ENSCAFG00020008206)	ENSCAFG00020008319	FAM135A (ENSCAFG00020008381)	SDHAF4 (ENSCAFG00020009223)	ENSCAFG00020009226	SMAP1 (ENSCAFG00020009239)	ENSCAFG00020009243	ENSCAFG00020009249	OGFRL1 (ENSCAFG00020009281)	RIMS1 (ENSCAFG00020009359)	KCNQ5 (ENSCAFG00020009938)	ENSCAFG00020010018
Dog	MODERN SPECIES	3	BEND6 (ENSCAFG00845013601)	ZNF451 (ENSCAFG00845013682)	BAG2 (ENSCAFG00845013818)	RAB23 (ENSCAFG00845006719)	PRIM2 (ENSCAFG00845006773)	KHDRBS2 (ENSCAFG00845006902)	ENSCAFG00845007005	ENSCAFG00845007043	LGSN (ENSCAFG00845007217)	PTP4A1 (ENSCAFG00845007421)	PHF3 (ENSCAFG00845007530)	ENSCAFG00845007728	ENSCAFG00845007847	ENSCAFG00845007925	ENSCAFG00845007970	ENSCAFG00845007982 #22	ENSCAFG00845008005	ADGRB3 (ENSCAFG00845008060)	LMBRD1 (ENSCAFG00845008243)	COL19A1 (ENSCAFG00845008400)	COL9A1 (ENSCAFG00845008634)	FAM135A (ENSCAFG00845009022)	SDHAF4 (ENSCAFG00845009642)	SMAP1 (ENSCAFG00845009742)	B3GAT2 (ENSCAFG00845010055)	ENSCAFG00845010137	OGFRL1 (ENSCAFG00845010164)	RIMS1 (ENSCAFG00845010428)	KCNQ5 (ENSCAFG00845011313)	ENSCAFG00845011834	DPPA5 (ENSCAFG00845011867)
Red fox	MODERN SPECIES	7	RAB23 (ENSVVUG00000008535)	PRIM2 (ENSVVUG00000008584)	ENSVVUG00000008637	KHDRBS2 (ENSVVUG00000008652)	LGSN (ENSVVUG00000008700)	PTP4A1 (ENSVVUG00000008724)	PHF3 (ENSVVUG00000008751)	ENSVVUG00000008860	ENSVVUG00000008891	ENSVVUG00000008894	ENSVVUG00000008901	ENSVVUG00000008911	ENSVVUG00000008913	ENSVVUG00000008929	ENSVVUG00000008930	ENSVVUG00000008948 #22	ADGRB3 (ENSVVUG00000008980)	ENSVVUG00000009318	LMBRD1 (ENSVVUG00000009340)	COL19A1 (ENSVVUG00000009362)	ENSVVUG00000009380	FAM135A (ENSVVUG00000009408)	SDHAF4 (ENSVVUG00000009454)	SMAP1 (ENSVVUG00000009458)	ENSVVUG00000009464	B3GAT2 (ENSVVUG00000009508)	OGFRL1 (ENSVVUG00000009555)	ENSVVUG00000009573	ENSVVUG00000009586	RIMS1 (ENSVVUG00000009659)
Canidae	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d.d #22
Canis_lupus	DUPLICATION
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT00940000156578	ENSGT00390000018542.a	ENSGT00440000039203	ENSGT00940000154464.b	ENSGT00940000153840.a.b	ENSGT00940000155497	ENSGT00940000155618	ENSGT00940000153657.A	ENSGT00390000001347.v.c.a	ENSGT00920000149129	ENSGT00940000154272.B	ENSGT00950000182979.a.b.b.a	ENSGT00940000157282	ENSGT00950000183122.C	ENSGT00940000155813	ENSGT00950000182802.B.a.a.a.a.i.d.d.a #22	ENSGT00940000160998	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594	ENSGT00390000016774	ENSGT00530000063801.a	ENSGT00390000013127.a	ENSGT01030000234887	ENSGT00390000008221	ENSGT00510000048276	ENSGT00950000182935.B.b.c	ENSGT00390000017606.a.a.j.l.p	ENSGT00940000157367	ENSGT00940000158365	ENSGT00940000162772
Dog	MODERN SPECIES	1	TEF (ENSCAFG00845017239)	ZC3H7B (ENSCAFG00845017344)	RANGAP1 (ENSCAFG00845017556)	L3MBTL2 (ENSCAFG00845017974)	EP300 (ENSCAFG00845018383)	RBX1 (ENSCAFG00845019033)	XPNPEP3 (ENSCAFG00845019212)	ST13 (ENSCAFG00845019349)	SLC25A17 (ENSCAFG00845019500)	MDH2 (ENSCAFG00845019601)	MCHR1 (ENSCAFG00845019660)	MRTFA (ENSCAFG00845019751)	SGSM3 (ENSCAFG00845020097)	ADSL (ENSCAFG00845020328)	TNRC6B (ENSCAFG00845020617)	ENSCAFG00845020976 #22	FAM83F (ENSCAFG00845021004)	GRAP2 (ENSCAFG00845021051)	ENSCAFG00845021105	ENTHD1 (ENSCAFG00845021136)	CACNA1I (ENSCAFG00845021242)	ATF4 (ENSCAFG00845021497)	MIEF1 (ENSCAFG00845021530)	TAB1 (ENSCAFG00845021610)	ENSCAFG00845021674	SYNGR1 (ENSCAFG00845021779)	RPL3 (ENSCAFG00845021864)	PDGFB (ENSCAFG00845022039)	CBX7 (ENSCAFG00845022140)	APOBEC3Z3 (ENSCAFG00845022251)	APOBEC3Z1 (ENSCAFG00845022347)
Dingo	MODERN SPECIES	307	ZC3H7B (ENSCAFG00020002005)	RANGAP1 (ENSCAFG00020002019)	CHADL (ENSCAFG00020002027)	L3MBTL2 (ENSCAFG00020002034)	ENSCAFG00020002042	ENSCAFG00020002075	RBX1 (ENSCAFG00020002079)	XPNPEP3 (ENSCAFG00020002086)	ENSCAFG00020002103	SLC25A17 (ENSCAFG00020002111)	MCHR1 (ENSCAFG00020002114)	MRTFA (ENSCAFG00020002129)	SGSM3 (ENSCAFG00020002141)	ADSL (ENSCAFG00020002150)	TNRC6B (ENSCAFG00020002189)	ENSCAFG00020002329 #22	FAM83F (ENSCAFG00020002339)	GRAP2 (ENSCAFG00020002345)	ENSCAFG00020002362	ENTHD1 (ENSCAFG00020002369)	CACNA1I (ENSCAFG00020002384)	RPS19BP1 (ENSCAFG00020002454)	ATF4 (ENSCAFG00020002461)	MIEF1 (ENSCAFG00020002464)	ENSCAFG00020002487	MGAT3 (ENSCAFG00020002492)	TAB1 (ENSCAFG00020002497)	SYNGR1 (ENSCAFG00020002516)	ENSCAFG00020002524	PDGFB (ENSCAFG00020002561)	CBX7 (ENSCAFG00020002567)
Canis_lupus	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d.d.b #22
Dog	MODERN SPECIES		ENSCAFG00845001539	PGM5 (ENSCAFG00845001506)	TMEM252 (ENSCAFG00845001485)	PIP5K1B (ENSCAFG00845001394)	FXN (ENSCAFG00845001342)	TJP2 (ENSCAFG00845001062)	ENSCAFG00845000920	ENTREP1 (ENSCAFG00845000882)	APBA1 (ENSCAFG00845000845)	PTAR1 (ENSCAFG00845000783)	CFAP95 (ENSCAFG00845000762)	ENSCAFG00845000740	MAMDC2 (ENSCAFG00845000707)	ENSCAFG00845000666	KLF9 (ENSCAFG00845000628)	ENSCAFG00845000598 #22	TRPM3 (ENSCAFG00845000414)	CEMIP2 (ENSCAFG00845000165)	ABHD17B (ENSCAFG00845000123)	C9orf85 (ENSCAFG00845000099)	ENSCAFG00845000091	GDA (ENSCAFG00845000069)	ZFAND5 (ENSCAFG00845000056)	TMC1 (ENSCAFG00845000046)	ALDH1A1 (ENSCAFG00845000042)	ANXA1 (ENSCAFG00845000040)	ENSCAFG00845000037	ENSCAFG00845012398	RORB (ENSCAFG00845012330)	TRPM6 (ENSCAFG00845011822)	C1H9orf40 (ENSCAFG00845011724)
Laurasiatheria_c	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Chiroptera	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Microchiroptera	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Microbat	MODERN SPECIES	1198											GLIPR1 (ENSMLUG00000002333)	GLIPR1L2 (ENSMLUG00000002541)	GLIPR1L1 (ENSMLUG00000002538)	KCNC2 (ENSMLUG00000010813)	ATXN7L3B (ENSMLUG00000028404)	ENSMLUG00000024302 #22	ENSMLUG00000025896
Greater horseshoe bat	MODERN SPECIES	15	SNX5 (ENSRFEG00010008295)	MGME1 (ENSRFEG00010008379)	OVOL2 (ENSRFEG00010008405)	PET117 (ENSRFEG00010008472)	KAT14 (ENSRFEG00010008509)	ZNF133 (ENSRFEG00010008595)	ENSRFEG00010008604	DZANK1 (ENSRFEG00010008657)	POLR3F (ENSRFEG00010008934)	RBBP9 (ENSRFEG00010008976)	SEC23B (ENSRFEG00010009046)	SMIM26 (ENSRFEG00010009139)	DTD1 (ENSRFEG00010009168)	ENSRFEG00010009202	SLC24A3 (ENSRFEG00010009266)	ENSRFEG00010009294 #22	RIN2 (ENSRFEG00010009330)	NAA20 (ENSRFEG00010009410)	CRNKL1 (ENSRFEG00010009485)	CFAP61 (ENSRFEG00010009533)	INSM1 (ENSRFEG00010009617)	RALGAPA2 (ENSRFEG00010009655)	ENSRFEG00010009788	KIZ (ENSRFEG00010009832)	ENSRFEG00010010021	XRN2 (ENSRFEG00010010058)	NKX2-4 (ENSRFEG00010010146)	NKX2-2 (ENSRFEG00010010185)	PAX1 (ENSRFEG00010010205)	ENSRFEG00010010271	FOXA2 (ENSRFEG00010010354)
Equus	ANCESTRAL SPECIES	27	ENSGT00530000063168.a.a.b	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000161795	ENSGT01090000260962	ENSGT00950000182835.c.c	ENSGT00530000063540.a	ENSGT00940000159912	ENSGT00940000162389	ENSGT00940000162070	ENSGT00940000163245	ENSGT00390000008621.i	ENSGT00940000160559	ENSGT00950000182802.B.a.a.a.a.i.d #22	ENSGT00940000160940	ENSGT00940000159479	ENSGT00940000162262	ENSGT00940000160459	ENSGT00940000153313.C.a	ENSGT00940000153763.a	ENSGT00940000162674	ENSGT00940000153097.A	ENSGT00390000013859	ENSGT00940000161807	ENSGT00390000003809	ENSGT00940000159855	ENSGT01030000234637.b.c	ENSGT00940000153629.a.b	ENSGT00940000158528.y.a
Horse	MODERN SPECIES	480	FGD1 (ENSECAG00000000025)	GNL3L (ENSECAG00000000035)	ENSECAG00000059470	MAGED2 (ENSECAG00000000036)	ENSECAG00000057341	ENSECAG00000052462	PFKFB1 (ENSECAG00000000039)	APEX2 (ENSECAG00000026921)	ALAS2 (ENSECAG00000000068)	MAGED1 (ENSECAG00000040088)	GSPT2 (ENSECAG00000043139)	ENSECAG00000034424	ENSECAG00000029663	ENSECAG00000037493	NUDT11 (ENSECAG00000032305)	ENSECAG00000023638 #22	BMP15 (ENSECAG00000023233)	SHROOM4 (ENSECAG00000021309)	DGKK (ENSECAG00000015609)	CCNB3 (ENSECAG00000008787)	AKAP4 (ENSECAG00000024064)	CLCN5 (ENSECAG00000010745)	USP27X (ENSECAG00000009308)	ENSECAG00000037484	PPP1R3F (ENSECAG00000007296)	FOXP3 (ENSECAG00000022667)	CCDC22 (ENSECAG00000010680)	CACNA1F (ENSECAG00000016391)	SYP (ENSECAG00000015208)	PRICKLE3 (ENSECAG00000009597)	MAGIX (ENSECAG00000023295)
Donkey	DUPLICATION
Donkey	DUPLICATION
Donkey	MODERN SPECIES	25	TRIM63 (ENSEASG00005004036)	PDIK1L (ENSEASG00005027803)	FAM110D (ENSEASG00005004033) #7	C1orf232 (ENSEASG00005031359) #8	CNKSR1 (ENSEASG00005003974) #11	ZNF593OS (ENSEASG00005004026) #9	CATSPER4 (ENSEASG00005003966) #12	CEP85 (ENSEASG00005003964) #14	ENSEASG00005038458 #15	UBXN11 (ENSEASG00005003961) #16	ENSEASG00005003958 #17	CRYBG2 (ENSEASG00005003956) #18	ZNF683 (ENSEASG00005003952)	LIN28A (ENSEASG00005026912) #20	DHDDS (ENSEASG00005003944) #21	ENSEASG00005037497 #22	RPS6KA1 (ENSEASG00005003928) #23	ARID1A (ENSEASG00005008616) #24	PIGV (ENSEASG00005008625) #25	ZDHHC18 (ENSEASG00005038436) #26	SFN (ENSEASG00005008630)	GPN2 (ENSEASG00005033906) #27	GPATCH3 (ENSEASG00005008636) #28	NR0B2 (ENSEASG00005008640) #29	NUDC (ENSEASG00005008644) #30	KDF1 (ENSEASG00005008678) #31	TRNP1 (ENSEASG00005008681) #32	TENT5B (ENSEASG00005030650) #33	SLC9A1 (ENSEASG00005008683) #34	WDTC1 (ENSEASG00005008688) #35	TMEM222 (ENSEASG00005027327) #36
Donkey	MODERN SPECIES	36	SLC38A5 (ENSEASG00005008319)	ENSEASG00005008327	ENSEASG00005008331	ENSEASG00005010957	ENSEASG00005027313	ZNF182 (ENSEASG00005008334)	ZNF81 (ENSEASG00005011135)	UXT (ENSEASG00005036125)	ELK1 (ENSEASG00005033281)	CFP (ENSEASG00005004762)	ENSEASG00005004759	SYN1 (ENSEASG00005004719)	ENSEASG00005004712	ENSEASG00005023981	ENSEASG00005028533	ENSEASG00005030810 #22	ZNF157 (ENSEASG00005030147)	USP11 (ENSEASG00005014306)	CDK16 (ENSEASG00005014307)	UBA1 (ENSEASG00005014308)	NDUFB11 (ENSEASG00005031508)	RGN (ENSEASG00005014313)	ENSEASG00005014316	JADE3 (ENSEASG00005014315)	RP2 (ENSEASG00005014317)	SLC9A7 (ENSEASG00005022325)	CHST7 (ENSEASG00005022338)	ENSEASG00005036877	ENSEASG00005034878	ENSEASG00005036110	ENSEASG00005033130
Donkey	MODERN SPECIES	36	ENSEASG00005013849	TSR2 (ENSEASG00005034316)	FGD1 (ENSEASG00005013013)	GNL3L (ENSEASG00005006957)	MAGED2 (ENSEASG00005018726)	ENSEASG00005034501	PFKFB1 (ENSEASG00005022726)	APEX2 (ENSEASG00005011694)	ENSEASG00005011666	ENSEASG00005027347	ENSEASG00005018677	ENSEASG00005018541	ENSEASG00005037403	ENSEASG00005030435	ENSEASG00005027341	ENSEASG00005003940 #22	ENSEASG00005026757	ENSEASG00005037978	ENSEASG00005033094	ENSEASG00005007932	ENSEASG00005031889	ENSEASG00005000354	ENSEASG00005000390	ENSEASG00005029105	ENSEASG00005000434	ENSEASG00005000466	ENSEASG00005033957	ENSEASG00005007577	ENSEASG00005036903	ENSEASG00005000437 ##29	ENSEASG00005026705
Artiodactyla	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Suina	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Pig	MODERN SPECIES	14	FAM110D (ENSSSCG00000031074) #7	C1orf232 (ENSSSCG00000041671) #8	ZNF593 (ENSSSCG00000045776) #10	ZNF593OS (ENSSSCG00000059106) #9	CNKSR1 (ENSSSCG00000028387) #11	CATSPER4 (ENSSSCG00000026526) #12	ENSSSCG00000045528 #13	CEP85 (ENSSSCG00000026731) #14	UBXN11 (ENSSSCG00000033546) #16	SH3BGRL3 (ENSSSCG00000034937) #15	CD52 (ENSSSCG00000057268) #17	CRYBG2 (ENSSSCG00000033539) #18	ZNF683 (ENSSSCG00000040579)	LIN28A (ENSSSCG00000003557) #20	DHDDS (ENSSSCG00000033516) #21	HMGN2 (ENSSSCG00000003555) #22	RPS6KA1 (ENSSSCG00000003558) #23	ARID1A (ENSSSCG00000003559) #24	PIGV (ENSSSCG00000040007) #25	ZDHHC18 (ENSSSCG00000003561) #26	SFN (ENSSSCG00000062214)	GPN2 (ENSSSCG00000053928) #27	GPATCH3 (ENSSSCG00000003564) #28	NR0B2 (ENSSSCG00000003565) #29	NUDC (ENSSSCG00000003566) #30	KDF1 (ENSSSCG00000003567) #31	ENSSSCG00000040871	TRNP1 (ENSSSCG00000027325) #32	TENT5B (ENSSSCG00000036755) #33	SLC9A1 (ENSSSCG00000003569) #34	WDTC1 (ENSSSCG00000003570) #35
Artiodactyla_a	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Camelidae	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Alpaca	MODERN SPECIES	5713																ENSVPAG00000000776 #22
Artiodactyla_b	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Cetacea	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Odontoceti	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Odontoceti_a	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Odontoceti_b	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000159519	ENSGT00940000158261	ENSGT00990000203615.b.b	ENSGT01080000257365.b.a.b.a.b	ENSGT00940000154313.d	ENSGT00940000159663	ENSGT00940000157181	ENSGT00390000016213	ENSGT00940000158740	ENSGT00530000063252.a.a	ENSGT00940000155418.b	ENSGT00940000153306.A.b	ENSGT00940000159642	ENSGT00940000155801	ENSGT00950000182856.b	ENSGT00950000182802.B.a.a.a.a.i.d #22	ENSGT01010000222806	ENSGT00940000158679	ENSGT00940000160304	ENSGT00390000002749	ENSGT00940000155900	ENSGT00940000156937	ENSGT00940000153566.b	ENSGT00950000183064.a.b.a	ENSGT00390000013297	ENSGT00940000157590	ENSGT00950000182942.b.b	ENSGT00940000157165
Beluga whale	MODERN SPECIES	63	FLI1 (ENSDLEG00000019461)	KCNJ1 (ENSDLEG00000019453)	KCNJ5 (ENSDLEG00000019451)	ARHGAP32 (ENSDLEG00000019440)	BARX2 (ENSDLEG00000019433)	TMEM45B (ENSDLEG00000019429)	NFRKB (ENSDLEG00000019422)	PRDM10 (ENSDLEG00000019408)	ENSDLEG00000019400	APLP2 (ENSDLEG00000019378)	ST14 (ENSDLEG00000019363)	ZBTB44 (ENSDLEG00000019358)	ADAMTS8 (ENSDLEG00000019352)	ADAMTS15 (ENSDLEG00000019344)	SNX19 (ENSDLEG00000019307)	ENSDLEG00000019286 #22	ENSDLEG00000019279	NTM (ENSDLEG00000019231)	OPCML (ENSDLEG00000019213)	ENSDLEG00000019203	ENSDLEG00000019191	IGSF9B (ENSDLEG00000019127)	JAM3 (ENSDLEG00000019108)	NCAPD3 (ENSDLEG00000017964)	VPS26B (ENSDLEG00000017816)	THYN1 (ENSDLEG00000017777)	ACAD8 (ENSDLEG00000017695)	GLB1L2 (ENSDLEG00000016273)	B3GAT1 (ENSDLEG00000016177)
Narwhal	MODERN SPECIES	314	ETS1 (ENSMMNG00015020697)	FLI1 (ENSMMNG00015020645)	KCNJ1 (ENSMMNG00015020626)	KCNJ5 (ENSMMNG00015020608)	ARHGAP32 (ENSMMNG00015020492)	BARX2 (ENSMMNG00015020437)	TMEM45B (ENSMMNG00015020413)	NFRKB (ENSMMNG00015020374)	PRDM10 (ENSMMNG00015020228)	APLP2 (ENSMMNG00015020053)	ST14 (ENSMMNG00015019969)	ZBTB44 (ENSMMNG00015019947)	ADAMTS8 (ENSMMNG00015019919)	ADAMTS15 (ENSMMNG00015019884)	SNX19 (ENSMMNG00015019823)	ENSMMNG00015019768 #22	ENSMMNG00015019754	NTM (ENSMMNG00015019609)	OPCML (ENSMMNG00015019531)	SPATA19 (ENSMMNG00015019493)	IGSF9B (ENSMMNG00015019460)	JAM3 (ENSMMNG00015019275)	NCAPD3 (ENSMMNG00015019099)	VPS26B (ENSMMNG00015019066)	THYN1 (ENSMMNG00015019021)	ACAD8 (ENSMMNG00015018956)	GLB1L2 (ENSMMNG00015018837)	B3GAT1 (ENSMMNG00015018785)
Sperm whale	MODERN SPECIES		APP (ENSPCTG00005000709)	GABPA (ENSPCTG00005000558)	ATP5PF (ENSPCTG00005000538)	JAM2 (ENSPCTG00005000503)	MRPL39 (ENSPCTG00005000471)	ENSPCTG00005000440	ENSPCTG00005000423	NCAM2 (ENSPCTG00005000381)	ENSPCTG00005000328	ENSPCTG00005000315	TMPRSS15 (ENSPCTG00005000270)	CHODL (ENSPCTG00005021207)	C21orf91 (ENSPCTG00005021184)	BTG3 (ENSPCTG00005021168)	ENSPCTG00005021160 ##22	ENSPCTG00005021142 #22	CXADR (ENSPCTG00005021100)	ENSPCTG00005021061	USP25 (ENSPCTG00005020926)	ENSPCTG00005020890	NRIP1 (ENSPCTG00005020884)	SAMSN1 (ENSPCTG00005020754)	HSPA13 (ENSPCTG00005020678)	ENSPCTG00005020352	RBM11 (ENSPCTG00005020241)	LIPI (ENSPCTG00005020089)	ENSPCTG00005019983	ROBO2 (ENSPCTG00005019510)	ROBO1 (ENSPCTG00005018380)	GBE1 (ENSPCTG00005018274)	ENSPCTG00005018235
Pecora	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Percora_a	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Bovidae	ANCESTRAL SPECIES																	ENSGT00950000182802.B.a.a.a.a.i.d #22
Bovinae	ANCESTRAL SPECIES	35	ENSGT00530000064023.b	ENSGT00390000012924.a	ENSGT00940000158133	ENSGT00940000154481.a.b.bc	ENSGT00940000174968	ENSGT00940000165162	ENSGT00940000154481.a.b.ac.a	ENSGT00390000011642	ENSGT00950000183154.a	ENSGT00530000063692.b	ENSGT00940000155683	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a	ENSGT00950000182802.B.a.a.a.a.i.d #22	ENSGT00530000063946.b	ENSGT00940000161394.m.a	ENSGT00940000157012	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000160501	ENSGT00940000155634	ENSGT00390000008642	ENSGT00940000156483	ENSGT00940000156557	ENSGT01030000234597.a.a.i.a.d	ENSGT00940000160715	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000155913
Bos	ANCESTRAL SPECIES	19	ENSGT00530000064023.b	ENSGT00390000012924.a	ENSGT00940000158133	ENSGT00940000154481.a.b.bc	ENSGT00940000174968	ENSGT00940000165162	ENSGT00940000154481.a.b.ac.a	ENSGT00390000011642	ENSGT00950000183154.a	ENSGT00530000063692.b	ENSGT00940000155683	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a	ENSGT00950000182802.B.a.a.a.a.i.d #22	ENSGT00530000063946.b	ENSGT00940000161394.m.a	ENSGT00940000157012	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000160501	ENSGT00940000155634	ENSGT00390000008642	ENSGT00940000156483	ENSGT00940000156557	ENSGT01030000234597.a.a.i.a.d	ENSGT00940000160715	ENSGT00390000003560	ENSGT00390000004028	ENSGT00940000155913
Bos_a	ANCESTRAL SPECIES	54	ENSGT00730000111244	ENSGT00940000158401	ENSGT00390000013337	ENSGT00530000064023.b	ENSGT00390000012924.a	ENSGT00940000158133	ENSGT00940000154481.a.b.bc	ENSGT00390000011642	ENSGT00950000183154.a	ENSGT00530000063692.b	ENSGT00940000155683	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a	ENSGT00950000182802.B.a.a.a.a.i.d #22	ENSGT00530000063946.b	ENSGT00940000161394.m.a	ENSGT00940000157012	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000160501	ENSGT00940000153147.m.a.a.a.a.b	ENSGT00940000155634	ENSGT00390000008642	ENSGT00940000156483	ENSGT01030000235099	ENSGT00940000156557	ENSGT01030000234597.a.a.i.a.d	ENSGT00940000160715	ENSGT00390000003560
Wild yak	MODERN SPECIES	414	ZBTB2 (ENSBMUG00000022889)	RMND1 (ENSBMUG00000022921)	ARMT1 (ENSBMUG00000022940)	CCDC170 (ENSBMUG00000022950)	ENSBMUG00000022966	SYNE1 (ENSBMUG00000023407)	MYCT1 (ENSBMUG00000023638)	VIP (ENSBMUG00000023648)	FBXO5 (ENSBMUG00000023656)	MTRF1L (ENSBMUG00000023676)	RGS17 (ENSBMUG00000023688)	ENSBMUG00000023702	OPRM1 (ENSBMUG00000023738)	IPCEF1 (ENSBMUG00000023775)	CNKSR3 (ENSBMUG00000023803)	ENSBMUG00000023809 #22	SCAF8 (ENSBMUG00000023827)	ENSBMUG00000023830	TIAM2 (ENSBMUG00000023891)	TFB1M (ENSBMUG00000023932)	CLDN20 (ENSBMUG00000023939)	NOX3 (ENSBMUG00000023948)
Bos_b	ANCESTRAL SPECIES	42	ENSGT00390000013337	ENSGT00530000064023.b	ENSGT00390000012924.a	ENSGT00940000158133	ENSGT00940000154481.a.b.bc	ENSGT00940000165162	ENSGT00940000154481.a.b.ac.a	ENSGT00390000011642	ENSGT00950000183154.a	ENSGT00530000063692.b	ENSGT00940000155683	ENSGT00940000155393.d	ENSGT00940000158236	ENSGT00940000154428.b	ENSGT00940000154428.a	ENSGT00950000182802.B.a.a.a.a.i.d #22	ENSGT00740000117156.b.e.a	ENSGT00530000063946.b	ENSGT00940000161394.m.a	ENSGT00940000157012	ENSGT00950000183142.a.b.a.a	ENSGT00940000161252	ENSGT00940000160501	ENSGT00940000155634	ENSGT00390000008642	ENSGT00940000156483	ENSGT00940000156557	ENSGT01030000234597.a.a.i.a.d	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.b.a.a.a.a.b.a.b.a.a.b	ENSGT00940000160715	ENSGT00390000003560
Hybrid Bos Indicus	MODERN SPECIES	28	AKAP12 (ENSBIXG00005020718)	ZBTB2 (ENSBIXG00005020697)	RMND1 (ENSBIXG00005020664)	ARMT1 (ENSBIXG00005020618)	CCDC170 (ENSBIXG00005003477)	ENSBIXG00005020541	ESR1 (ENSBIXG00005020485)	SYNE1 (ENSBIXG00005007834)	MYCT1 (ENSBIXG00005019369)	VIP (ENSBIXG00005019364)	FBXO5 (ENSBIXG00005019333)	MTRF1L (ENSBIXG00005005667)	OPRM1 (ENSBIXG00005019182)	IPCEF1 (ENSBIXG00005019118)	CNKSR3 (ENSBIXG00005019050)	ENSBIXG00005019032 #22	ENSBIXG00005019017	SCAF8 (ENSBIXG00005005736)	ENSBIXG00005000047	TIAM2 (ENSBIXG00005018908)	TFB1M (ENSBIXG00005005435)	CLDN20 (ENSBIXG00005018824)	NOX3 (ENSBIXG00005018801)	ARID1B (ENSBIXG00005018627)	ENSBIXG00005017632	TMEM242 (ENSBIXG00005017618)	ZDHHC14 (ENSBIXG00005017525)	SNX9 (ENSBIXG00005017441)	ENSBIXG00005017357	ENSBIXG00005017343	SYNJ2 (ENSBIXG00005017312)
Cow	MODERN SPECIES	28	CCDC170 (ENSBTAG00000004099)	ESR1 (ENSBTAG00000007159)	SYNE1 (ENSBTAG00000009362)	ENSBTAG00000052949	ENSBTAG00000054309	ENSBTAG00000052173	ENSBTAG00000054597	MYCT1 (ENSBTAG00000043975)	VIP (ENSBTAG00000013400)	FBXO5 (ENSBTAG00000021193)	MTRF1L (ENSBTAG00000009275)	RGS17 (ENSBTAG00000009277)	OPRM1 (ENSBTAG00000019719)	IPCEF1 (ENSBTAG00000003489)	CNKSR3 (ENSBTAG00000012674)	ENSBTAG00000020723 #22	ENSBTAG00000049872	SCAF8 (ENSBTAG00000031917)	ENSBTAG00000048691	TIAM2 (ENSBTAG00000010047)	TFB1M (ENSBTAG00000031895)	CLDN20 (ENSBTAG00000046726)	NOX3 (ENSBTAG00000013551)	ARID1B (ENSBTAG00000002728)	ENSBTAG00000045772	TMEM242 (ENSBTAG00000007201)	ZDHHC14 (ENSBTAG00000018464)	SNX9 (ENSBTAG00000006323)	ENSBTAG00000052926	ENSBTAG00000048573	SYNJ2 (ENSBTAG00000000817)
American bison	MODERN SPECIES	3071	AKAP12 (ENSBBBG00000008737)	ZBTB2 (ENSBBBG00000012799)	RMND1 (ENSBBBG00000012797)	ARMT1 (ENSBBBG00000012777)	CCDC170 (ENSBBBG00000012772)	ENSBBBG00000008109	SYNE1 (ENSBBBG00000012707)	MYCT1 (ENSBBBG00000012062)	VIP (ENSBBBG00000012054)	FBXO5 (ENSBBBG00000012046)	MTRF1L (ENSBBBG00000012041)	RGS17 (ENSBBBG00000002257)	OPRM1 (ENSBBBG00000012004)	IPCEF1 (ENSBBBG00000011980)	CNKSR3 (ENSBBBG00000011968)	ENSBBBG00000011959 #22	SCAF8 (ENSBBBG00000002232)	ENSBBBG00000001962	TIAM2 (ENSBBBG00000002224)	TFB1M (ENSBBBG00000011905)	CLDN20 (ENSBBBG00000011901)	NOX3 (ENSBBBG00000011894)	ENSBBBG00000011886	ARID1B (ENSBBBG00000011875)	ENSBBBG00000002188	TMEM242 (ENSBBBG00000011763)	ZDHHC14 (ENSBBBG00000011752)	SNX9 (ENSBBBG00000011740)	ENSBBBG00000011725	SYNJ2 (ENSBBBG00000008492)	SERAC1 (ENSBBBG00000011692)
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	354	FAM110D (ENSMMSG00000005911) #7	C1orf232 (ENSMMSG00000005886) #8	ZNF593 (ENSMMSG00000005859) #10	ZNF593OS (ENSMMSG00000005838) #9	CNKSR1 (ENSMMSG00000005791) #11	CATSPER4 (ENSMMSG00000005745) #12	ENSMMSG00000005704 #13	CEP85 (ENSMMSG00000005638) #14	SH3BGRL3 (ENSMMSG00000005593) #15	UBXN11 (ENSMMSG00000005530) #16	ENSMMSG00000005483 #17	CRYBG2 (ENSMMSG00000005292) #18	ENSMMSG00000005241 #19	LIN28A (ENSMMSG00000005189) #20	DHDDS (ENSMMSG00000005089) #21	ENSMMSG00000005048 #22	RPS6KA1 (ENSMMSG00000004814) #23	ENSMMSG00000004735	ARID1A (ENSMMSG00000004679) #24	PIGV (ENSMMSG00000004638) #25	ZDHHC18 (ENSMMSG00000004577) #26	SFN (ENSMMSG00000019892)	GPN2 (ENSMMSG00000019861) #27	GPATCH3 (ENSMMSG00000019842) #28	NR0B2 (ENSMMSG00000019826) #29	NUDC (ENSMMSG00000019794) #30	KDF1 (ENSMMSG00000019780) #31	TRNP1 (ENSMMSG00000019769) #32	TENT5B (ENSMMSG00000019758) #33	SLC9A1 (ENSMMSG00000019705) #34	WDTC1 (ENSMMSG00000019642) #35
Siberian musk deer	MODERN SPECIES	103					TSPAN17 (ENSMMSG00000016419)	EIF4E1B (ENSMMSG00000016357)	SNCB (ENSMMSG00000016299)	GPRIN1 (ENSMMSG00000016287)	CDHR2 (ENSMMSG00000016128)	RNF44 (ENSMMSG00000016055)	FAF2 (ENSMMSG00000016013)	CLTB (ENSMMSG00000015978)	ENSMMSG00000015940	ENSMMSG00000015922	ARL10 (ENSMMSG00000015885)	ENSMMSG00000015877 #22	COMMD10 (ENSMMSG00000015842)	SEMA6A (ENSMMSG00000015790)	ENSMMSG00000015762
Siberian musk deer	MODERN SPECIES	354	C1QA (ENSMMSG00000009478)	EPHA8 (ENSMMSG00000009498)	ZBTB40 (ENSMMSG00000009593)	WNT4 (ENSMMSG00000009640)	CDC42 (ENSMMSG00000009676)	ENSMMSG00000009708	ENSMMSG00000009722	ENSMMSG00000009743	HSPG2 (ENSMMSG00000009773)	LDLRAD2 (ENSMMSG00000010168)	USP48 (ENSMMSG00000010237)	RAP1GAP (ENSMMSG00000010756)	ALPL (ENSMMSG00000010954)	ECE1 (ENSMMSG00000011034)	EIF4G3 (ENSMMSG00000011175)	ENSMMSG00000011489 #22	HP1BP3 (ENSMMSG00000011530)	SH2D5 (ENSMMSG00000011565)	KIF17 (ENSMMSG00000011594)	DDOST (ENSMMSG00000004561)	PINK1 (ENSMMSG00000004678)	CDA (ENSMMSG00000004851)	FAM43B (ENSMMSG00000004865)	ENSMMSG00000004879	MUL1 (ENSMMSG00000004894)	CAMK2N1 (ENSMMSG00000004914)	VWA5B1 (ENSMMSG00000004945)	UBXN10 (ENSMMSG00000005098)	PLA2G2C (ENSMMSG00000005111)	PLA2G2F (ENSMMSG00000005144)	PLA2G2D (ENSMMSG00000005192)