Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Primates	ANCESTRAL SPECIES	18	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Catarrhini	ANCESTRAL SPECIES		ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Rhinopithecus	ANCESTRAL SPECIES	87	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00910000146348 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Golden snub-nosed monkey	MODERN SPECIES	1817	DOT1L (ENSRROG00000045004) #7	AP3D1 (ENSRROG00000031773) #8	ENSRROG00000041314 #9	IZUMO4 (ENSRROG00000042338) #10	MOB3A (ENSRROG00000039364) #11	MKNK2 (ENSRROG00000030837) #12	BTBD2 (ENSRROG00000029615) #13	ENSRROG00000045271 #14	SCAMP4 (ENSRROG00000043168) #15	ENSRROG00000036651 #16	ABHD17A (ENSRROG00000045474) #17	ENSRROG00000044138 #18	REXO1 (ENSRROG00000022002) #19	ATP8B3 (ENSRROG00000039383) #20	ENSRROG00000031907 #21	TCF3 (ENSRROG00000033174) #22	ENSRROG00000042612 #23	MBD3 (ENSRROG00000043725) #24	PLK5 (ENSRROG00000016360) #25	ADAMTSL5 (ENSRROG00000032945) #26	REEP6 (ENSRROG00000032802) #27	PCSK4 (ENSRROG00000035340) #28	C19orf25 (ENSRROG00000044642) #29	APC2 (ENSRROG00000034571) #30	ENSRROG00000038546 #31	DAZAP1 (ENSRROG00000037347) #32	GAMT (ENSRROG00000031478) #33	NDUFS7 (ENSRROG00000027740) #34	PWWP3A (ENSRROG00000033246) #35	EFNA2 (ENSRROG00000037148) #36	FAM174C (ENSRROG00000043456) #37
Black snub-nosed monkey	MODERN SPECIES	439												ABHD17A (ENSRBIG00000025506) #17	ENSRBIG00000037970 #18	REXO1 (ENSRBIG00000002136) #19	ATP8B3 (ENSRBIG00000042350) #20	TCF3 (ENSRBIG00000029950) #22	UQCR11 (ENSRBIG00000044179)	MBD3 (ENSRBIG00000033012) #24	ENSRBIG00000035383	ADAMTSL5 (ENSRBIG00000034521) #26	REEP6 (ENSRBIG00000036585) #27	PCSK4 (ENSRBIG00000035920) #28	C19orf25 (ENSRBIG00000030704) #29	APC2 (ENSRBIG00000035694) #30	ENSRBIG00000041908 #31	DAZAP1 (ENSRBIG00000032485) #32	GAMT (ENSRBIG00000033371) #33	NDUFS7 (ENSRBIG00000038827) #34	PWWP3A (ENSRBIG00000036575) #35	ENSRBIG00000028328 #36	FAM174C (ENSRBIG00000042672) #37
Cercopithecinae	DUPLICATION
Cercopithecinae	DUPLICATION
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036.c.a #22	ENSGT00910000146348 #23	ENSGT00940000157036.d #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036.c.a #22	ENSGT00940000157036.d #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036.c.a #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Cercopithecinae_d	ANCESTRAL SPECIES	22	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036.c.a #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Sooty mangabey	MODERN SPECIES	177	ENSCATG00000010390	DOT1L (ENSCATG00000038916) #7	ENSCATG00000043416 #9	AP3D1 (ENSCATG00000033383) #8	IZUMO4 (ENSCATG00000037484) #10	MOB3A (ENSCATG00000009409) #11	MKNK2 (ENSCATG00000042358) #12	BTBD2 (ENSCATG00000008762) #13	CSNK1G2 (ENSCATG00000033382) #14	SCAMP4 (ENSCATG00000031098) #15	ABHD17A (ENSCATG00000002146) #17	KLF16 (ENSCATG00000037745) #18	REXO1 (ENSCATG00000030746) #19	ATP8B3 (ENSCATG00000031064) #20	ONECUT3 (ENSCATG00000041421) #21	ENSCATG00000012828 #22	UQCR11 (ENSCATG00000044468)	MBD3 (ENSCATG00000044174) #24	MEX3D (ENSCATG00000029350)	PLK5 (ENSCATG00000031596) #25	ADAMTSL5 (ENSCATG00000014430) #26	REEP6 (ENSCATG00000043506) #27	PCSK4 (ENSCATG00000045251) #28	C19orf25 (ENSCATG00000044531) #29	APC2 (ENSCATG00000042966) #30	ENSCATG00000042597 #31	DAZAP1 (ENSCATG00000029559) #32	GAMT (ENSCATG00000040885) #33	NDUFS7 (ENSCATG00000038305) #34	PWWP3A (ENSCATG00000031659) #35	EFNA2 (ENSCATG00000034129) #36
Macaca	ANCESTRAL SPECIES	24	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036.d #22	ENSGT00910000146348 #23	ENSGT00940000157036.c.a #22	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36	ENSGT00530000064649 #37
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036.d #22	ENSGT00910000146348 #23	ENSGT00940000157036.c.a #22	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00530000063749.c.a #30	ENSGT00390000007991 #29	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36	ENSGT00530000064649 #37
Rhesus	MODERN SPECIES	10	DOT1L (ENSMMUG00000010107) #7	AP3D1 (ENSMMUG00000015663) #8	IZUMO4 (ENSMMUG00000015660) #10	MOB3A (ENSMMUG00000010984) #11	MKNK2 (ENSMMUG00000011265) #12	ENSMMUG00000059725 #13	CSNK1G2 (ENSMMUG00000006620) #14	ADAT3 (ENSMMUG00000049496)	SCAMP4 (ENSMMUG00000013747) #15	ABHD17A (ENSMMUG00000016539) #17	KLF16 (ENSMMUG00000047855) #18	REXO1 (ENSMMUG00000002847) #19	ATP8B3 (ENSMMUG00000002846) #20	ONECUT3 (ENSMMUG00000058741) #21	ENSMMUG00000062449	TCF3 (ENSMMUG00000009017) #22	MBD3 (ENSMMUG00000009014) #24	MEX3D (ENSMMUG00000053206)	ENSMMUG00000048694 #25	ADAMTSL5 (ENSMMUG00000003815) #26	REEP6 (ENSMMUG00000003060) #27	PCSK4 (ENSMMUG00000003056) #28	APC2 (ENSMMUG00000003053) #30	RPS15 (ENSMMUG00000061470) #31	GAMT (ENSMMUG00000003046) #33	NDUFS7 (ENSMMUG00000003045) #34	PWWP3A (ENSMMUG00000003043) #35	EFNA2 (ENSMMUG00000051284) #36	FAM174C (ENSMMUG00000022104) #37	DAZAP1 (ENSMMUG00000003047) #32	MIDN (ENSMMUG00000022100)
Vervet Monkey	MODERN SPECIES	25	SF3A2 (ENSCSAG00000011717)	PLEKHJ1 (ENSCSAG00000011738)	DOT1L (ENSCSAG00000011808) #7	AP3D1 (ENSCSAG00000011851) #8	IZUMO4 (ENSCSAG00000011863) #10	MOB3A (ENSCSAG00000011866) #11	MKNK2 (ENSCSAG00000011875) #12	BTBD2 (ENSCSAG00000011880) #13	CSNK1G2 (ENSCSAG00000011891) #14	SCAMP4 (ENSCSAG00000011900) #15	ABHD17A (ENSCSAG00000011907) #17	KLF16 (ENSCSAG00000011915) #18	REXO1 (ENSCSAG00000011926) #19	ATP8B3 (ENSCSAG00000011946) #20	ONECUT3 (ENSCSAG00000011954) #21	TCF3 (ENSCSAG00000011964) #22	ENSCSAG00000011969 #23	MBD3 (ENSCSAG00000011976) #24	MEX3D (ENSCSAG00000011984)	PLK5 (ENSCSAG00000011990) #25	ADAMTSL5 (ENSCSAG00000012011) #26	ENSCSAG00000012019	PCSK4 (ENSCSAG00000012070) #28	C19orf25 (ENSCSAG00000012103) #29	APC2 (ENSCSAG00000018458) #30	RPS15 (ENSCSAG00000012113) #31	DAZAP1 (ENSCSAG00000012126) #32	GAMT (ENSCSAG00000012137) #33	NDUFS7 (ENSCSAG00000012149) #34	PWWP3A (ENSCSAG00000012203) #35	EFNA2 (ENSCSAG00000012229) #36
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00940000157036.c.b #22
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00940000157036.c.b #22
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00940000157036.c.b #22
Cercopithecinae_d	ANCESTRAL SPECIES																	ENSGT00940000157036.c.b #22
Drill	MODERN SPECIES	376																ENSMLEG00000029168 #22
Sooty mangabey	MODERN SPECIES	533																ENSCATG00000014725 #22
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036.c.a #22	ENSGT00910000146348 #23	ENSGT00940000157036.d #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00550000075067 #8	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036.c.a #22	ENSGT00940000157036.d #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Macaca	ANCESTRAL SPECIES	24	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036.d #22	ENSGT00910000146348 #23	ENSGT00940000157036.c.a #22	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35
Pig-tailed macaque	MODERN SPECIES	76	ENSMNEG00000031778	DOT1L (ENSMNEG00000029107) #7	AP3D1 (ENSMNEG00000031993) #8	IZUMO4 (ENSMNEG00000039524) #10	MOB3A (ENSMNEG00000020359) #11	MKNK2 (ENSMNEG00000005449) #12	BTBD2 (ENSMNEG00000044787) #13	CSNK1G2 (ENSMNEG00000037071) #14	SCAMP4 (ENSMNEG00000038725) #15	ADAT3 (ENSMNEG00000014696)	ABHD17A (ENSMNEG00000018607) #17	KLF16 (ENSMNEG00000044693) #18	REXO1 (ENSMNEG00000028828) #19	ATP8B3 (ENSMNEG00000033361) #20	ONECUT3 (ENSMNEG00000032588) #21	TCF3 (ENSMNEG00000030490) #22	ENSMNEG00000031435 #23	MBD3 (ENSMNEG00000034026) #24	MEX3D (ENSMNEG00000043766)	PLK5 (ENSMNEG00000032883) #25	ADAMTSL5 (ENSMNEG00000026449) #26	REEP6 (ENSMNEG00000035742) #27	PCSK4 (ENSMNEG00000027452) #28	C19orf25 (ENSMNEG00000041395) #29	APC2 (ENSMNEG00000032973) #30	ENSMNEG00000028419 #31	DAZAP1 (ENSMNEG00000040014) #32	GAMT (ENSMNEG00000043692) #33	NDUFS7 (ENSMNEG00000038929) #34	PWWP3A (ENSMNEG00000018556) #35	EFNA2 (ENSMNEG00000039786) #36
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036.d #22	ENSGT00910000146348 #23	ENSGT00940000157036.c.a #22	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00530000063749.c.a #30	ENSGT00390000007991 #29	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35
Crab-eating macaque	MODERN SPECIES	10	SF3A2 (ENSMFAG00000002638)	PLEKHJ1 (ENSMFAG00000034618)	ENSMFAG00000049331 #7	AP3D1 (ENSMFAG00000033202) #8	IZUMO4 (ENSMFAG00000044044) #10	ENSMFAG00000003334 #11	MKNK2 (ENSMFAG00000037079) #12	BTBD2 (ENSMFAG00000003638) #13	ENSMFAG00000060215	ENSMFAG00000062602	SCAMP4 (ENSMFAG00000047177) #15	ENSMFAG00000051795 #18	ENSMFAG00000000498 #19	ATP8B3 (ENSMFAG00000030115) #20	ENSMFAG00000052194	TCF3 (ENSMFAG00000032612) #22	ENSMFAG00000057699 #23	MBD3 (ENSMFAG00000044264) #24	PLK5 (ENSMFAG00000002051) #25	ENSMFAG00000036443 #26	REEP6 (ENSMFAG00000046016) #27	ENSMFAG00000027143 #29	ENSMFAG00000031749 #31	DAZAP1 (ENSMFAG00000000789) #32	GAMT (ENSMFAG00000041341) #33	ENSMFAG00000002461 #34	PWWP3A (ENSMFAG00000039690) #35	EFNA2 (ENSMFAG00000036658) #36	FAM174C (ENSMFAG00000043438) #37	CIRBP (ENSMFAG00000034048)	MIDN (ENSMFAG00000043242)
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00940000157036.d #22
Cercopithecinae_d	ANCESTRAL SPECIES																	ENSGT00940000157036.d #22
Drill	MODERN SPECIES	1236	OAZ1 (ENSMLEG00000031485)	JSRP1 (ENSMLEG00000043114)	ENSMLEG00000016225	PLEKHJ1 (ENSMLEG00000025106)	DOT1L (ENSMLEG00000039660) #7	AP3D1 (ENSMLEG00000029244) #8	ENSMLEG00000034447 #9	IZUMO4 (ENSMLEG00000032686) #10	MKNK2 (ENSMLEG00000034344) #12	BTBD2 (ENSMLEG00000000820) #13	CSNK1G2 (ENSMLEG00000028648) #14	SCAMP4 (ENSMLEG00000034450) #15	ABHD17A (ENSMLEG00000042961) #17	REXO1 (ENSMLEG00000040971) #19	ATP8B3 (ENSMLEG00000030996) #20	ENSMLEG00000027602 #22	UQCR11 (ENSMLEG00000032134)	MBD3 (ENSMLEG00000038720) #24	ENSMLEG00000026857 #25	ADAMTSL5 (ENSMLEG00000039148) #26	PCSK4 (ENSMLEG00000019265) #28	C19orf25 (ENSMLEG00000042233) #29	APC2 (ENSMLEG00000036443) #30	ENSMLEG00000016828 #31	DAZAP1 (ENSMLEG00000035079) #32	GAMT (ENSMLEG00000036015) #33	NDUFS7 (ENSMLEG00000022660) #34	PWWP3A (ENSMLEG00000034210) #35	CIRBP (ENSMLEG00000038347)	MIDN (ENSMLEG00000043732)	ATP5F1D (ENSMLEG00000003687)
Hominoidea	ANCESTRAL SPECIES		ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb.t.b #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00910000148644	ENSGT00390000001700.a.a #35
Gibbon	MODERN SPECIES	7	PEAK3 (ENSNLEG00000002255)	OAZ1 (ENSNLEG00000002179)	JSRP1 (ENSNLEG00000002155)	ENSNLEG00000028884	ENSNLEG00000033384	ENSNLEG00000002134	ENSNLEG00000002122 #7	AP3D1 (ENSNLEG00000002065) #8	ENSNLEG00000031927 #9	IZUMO4 (ENSNLEG00000002023) #10	MOB3A (ENSNLEG00000002016) #11	ENSNLEG00000002013 #12	ADAT3 (ENSNLEG00000001999)	REXO1 (ENSNLEG00000001908) #19	ENSNLEG00000001905 #20	TCF3 (ENSNLEG00000001742) #22	UQCR11 (ENSNLEG00000032464)	MBD3 (ENSNLEG00000001734) #24	ENSNLEG00000001719	PLK5 (ENSNLEG00000001698) #25	ADAMTSL5 (ENSNLEG00000001690) #26	ENSNLEG00000030458 #27	ENSNLEG00000001682 #28	ENSNLEG00000001680 #29	APC2 (ENSNLEG00000001665) #30	ENSNLEG00000034934 #31	DAZAP1 (ENSNLEG00000001563) #32	ENSNLEG00000028017 #34	PWWP3A (ENSNLEG00000028938) #35	ENSNLEG00000001551	ENSNLEG00000036106 #36
Hominidae	ANCESTRAL SPECIES		ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb.t.b #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00910000148644	ENSGT00390000001700.a.a #35
Orangutan	MODERN SPECIES	10	ENSPPYG00000009341	DOT1L (ENSPPYG00000009340) #7	AP3D1 (ENSPPYG00000009339) #8	IZUMO4 (ENSPPYG00000009338) #10	MOB3A (ENSPPYG00000009337) #11	MKNK2 (ENSPPYG00000009336) #12	BTBD2 (ENSPPYG00000009335) #13	CSNK1G2 (ENSPPYG00000009334) #14	ENSPPYG00000009333	SCAMP4 (ENSPPYG00000009332) #15	ABHD17A (ENSPPYG00000009331) #17	ENSPPYG00000035888 #18	REXO1 (ENSPPYG00000009330) #19	ATP8B3 (ENSPPYG00000009329) #20	ONECUT3 (ENSPPYG00000040175) #21	TCF3 (ENSPPYG00000009327) #22	UQCR (ENSPPYG00000009326) #23	MBD3 (ENSPPYG00000034186) #24	MEX3D (ENSPPYG00000009324)	PLK5 (ENSPPYG00000009323) #25	ADAMTSL5 (ENSPPYG00000009322) #26	REEP6 (ENSPPYG00000009321) #27	PCSK4 (ENSPPYG00000009320) #28	C19orf25 (ENSPPYG00000030407) #29	APC2 (ENSPPYG00000009318) #30	RPS15 (ENSPPYG00000040762) #31	DAZAP1 (ENSPPYG00000009316) #32	GAMT (ENSPPYG00000009315) #33	NDUFS7 (ENSPPYG00000009314) #34	ENSPPYG00000031336	PWWP3A (ENSPPYG00000029807) #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00550000075067 #8	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p.b.b #17	ENSGT00940000155854.p.b.a.a #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb.t.b #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Gorilla	MODERN SPECIES	10	DOT1L (ENSGGOG00000006592) #7	ENSGGOG00000037964 #9	AP3D1 (ENSGGOG00000006580) #8	IZUMO4 (ENSGGOG00000006577) #10	MOB3A (ENSGGOG00000011201) #11	MKNK2 (ENSGGOG00000027137) #12	ENSGGOG00000007717 #13	ENSGGOG00000006155	ENSGGOG00000039429	SCAMP4 (ENSGGOG00000024198) #15	ENSGGOG00000037562 #17	ENSGGOG00000038452 #18	REXO1 (ENSGGOG00000009009) #19	ATP8B3 (ENSGGOG00000008991) #20	ENSGGOG00000008983 #21	TCF3 (ENSGGOG00000003667) #22	ENSGGOG00000002757 #23	ENSGGOG00000012396 #24	ENSGGOG00000001083	PLK5 (ENSGGOG00000012910) #25	ADAMTSL5 (ENSGGOG00000011619) #26	REEP6 (ENSGGOG00000007316) #27	ENSGGOG00000007307 #28	ENSGGOG00000002832 #29	APC2 (ENSGGOG00000002822) #30	ENSGGOG00000002818 #31	DAZAP1 (ENSGGOG00000002814) #32	ENSGGOG00000002809 #33	ENSGGOG00000002804 #34	PWWP3A (ENSGGOG00000002798) #35	ENSGGOG00000002341 #36
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00550000075067 #8	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p.b.b #17	ENSGT00940000155854.p.b.a.a #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb.u.e #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Human	MODERN SPECIES	10	PLEKHJ1 (ENSG00000104886)	DOT1L (ENSG00000104885) #7	AP3D1 (ENSG00000065000) #8	IZUMO4 (ENSG00000099840) #10	MOB3A (ENSG00000172081) #11	MKNK2 (ENSG00000099875) #12	BTBD2 (ENSG00000133243) #13	CSNK1G2 (ENSG00000133275) #14	ADAT3 (ENSG00000213638)	SCAMP4 (ENSG00000227500) #15	ABHD17A (ENSG00000129968) #17	KLF16 (ENSG00000129911) #18	REXO1 (ENSG00000079313) #19	ATP8B3 (ENSG00000130270) #20	ONECUT3 (ENSG00000205922) #21	TCF3 (ENSG00000071564) #22	UQCR11 (ENSG00000127540)	MBD3 (ENSG00000071655) #24	MEX3D (ENSG00000181588)	PLK5 (ENSG00000185988) #25	ADAMTSL5 (ENSG00000185761) #26	REEP6 (ENSG00000115255) #27	PCSK4 (ENSG00000115257) #28	C19orf25 (ENSG00000119559) #29	APC2 (ENSG00000115266) #30	RPS15 (ENSG00000115268) #31	DAZAP1 (ENSG00000071626) #32	GAMT (ENSG00000130005) #33	NDUFS7 (ENSG00000115286) #34	PWWP3A (ENSG00000160953) #35	EFNA2 (ENSG00000099617) #36
Pan	ANCESTRAL SPECIES	14	ENSGT00550000075067 #8	ENSGT00910000147114 #9	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00910000146653	ENSGT01050000245447	ENSGT00940000162150 #15	ENSGT00940000155854.p.b.a.a #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00910000146348 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb.t.b #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Chimpanzee	MODERN SPECIES	10	AP3D1 (ENSPTRG00000010223) #8	IZUMO4 (ENSPTRG00000010222) #10	MOB3A (ENSPTRG00000010221) #11	MKNK2 (ENSPTRG00000010220) #12	BTBD2 (ENSPTRG00000010219) #13	ENSPTRG00000010217	CSNK1G2 (ENSPTRG00000010218) #14	ENSPTRG00000049845	SCAMP4 (ENSPTRG00000042465) #15	ABHD17A (ENSPTRG00000010215) #17	ENSPTRG00000049033 #18	REXO1 (ENSPTRG00000010213) #19	ATP8B3 (ENSPTRG00000047280) #20	ONECUT3 (ENSPTRG00000045423) #21	ENSPTRG00000050650	TCF3 (ENSPTRG00000010211) #22	ENSPTRG00000010210 #23	MBD3 (ENSPTRG00000010209) #24	MEX3D (ENSPTRG00000010208)	PLK5 (ENSPTRG00000052226) #25	ADAMTSL5 (ENSPTRG00000023147) #26	PCSK4 (ENSPTRG00000010204) #28	ENSPTRG00000010203	APC2 (ENSPTRG00000051842) #30	ENSPTRG00000010200 #31	DAZAP1 (ENSPTRG00000010199) #32	GAMT (ENSPTRG00000010198) #33	NDUFS7 (ENSPTRG00000010196) #34	PWWP3A (ENSPTRG00000010195) #35	EFNA2 (ENSPTRG00000029192) #36	FAM174C (ENSPTRG00000010194) #37
Bonobo	MODERN SPECIES	10	DOT1L (ENSPPAG00000033986) #7	AP3D1 (ENSPPAG00000037152) #8	ENSPPAG00000029806 #9	IZUMO4 (ENSPPAG00000042151) #10	MOB3A (ENSPPAG00000040771) #11	MKNK2 (ENSPPAG00000041658) #12	ENSPPAG00000034042 #13	ENSPPAG00000026831 #14	ENSPPAG00000034367	ENSPPAG00000030727	SCAMP4 (ENSPPAG00000030995) #15	ADAT3 (ENSPPAG00000041771)	ENSPPAG00000034069 #17	REXO1 (ENSPPAG00000035735) #19	ENSPPAG00000043448 #20	TCF3 (ENSPPAG00000040276) #22	ENSPPAG00000030284 #23	MBD3 (ENSPPAG00000031282) #24	PLK5 (ENSPPAG00000025685) #25	ENSPPAG00000042942 #26	REEP6 (ENSPPAG00000030448) #27	PCSK4 (ENSPPAG00000034233) #28	ENSPPAG00000027336 #29	ENSPPAG00000013749 #30	ENSPPAG00000015902 #31	DAZAP1 (ENSPPAG00000033205) #32	ENSPPAG00000039491 #33	NDUFS7 (ENSPPAG00000005538) #34	PWWP3A (ENSPPAG00000025003) #35	ENSPPAG00000044080	ENSPPAG00000044065
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00720000108823.g	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067.z #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470.i #14	ENSGT00940000162150 #15	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613.b	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565.g #34	ENSGT00390000001700.a.a.i #35	ENSGT00940000160040.B #36
Mas night monkey	MODERN SPECIES	937	AMH (ENSANAG00000031784)	ENSANAG00000029477	PLEKHJ1 (ENSANAG00000038348)	DOT1L (ENSANAG00000026868) #7	AP3D1 (ENSANAG00000028148) #8	IZUMO4 (ENSANAG00000030921) #10	MOB3A (ENSANAG00000038176) #11	MKNK2 (ENSANAG00000037709) #12	BTBD2 (ENSANAG00000026816) #13	CSNK1G2 (ENSANAG00000034726) #14	SCAMP4 (ENSANAG00000031779) #15	ABHD17A (ENSANAG00000028521) #17	KLF16 (ENSANAG00000030532) #18	REXO1 (ENSANAG00000036896) #19	ENSANAG00000031845 #20	TCF3 (ENSANAG00000021796) #22	UQCR11 (ENSANAG00000026019)	MBD3 (ENSANAG00000026084) #24	ENSANAG00000029352	ADAMTSL5 (ENSANAG00000024837) #26	REEP6 (ENSANAG00000028787) #27	PCSK4 (ENSANAG00000024353) #28	C19orf25 (ENSANAG00000032897) #29	APC2 (ENSANAG00000037775) #30	ENSANAG00000034317 #31	DAZAP1 (ENSANAG00000036160) #32	GAMT (ENSANAG00000035363) #33	ENSANAG00000029757 #34	PWWP3A (ENSANAG00000026888) #35	EFNA2 (ENSANAG00000022997) #36	FAM174C (ENSANAG00000020672) #37
Cebidae	ANCESTRAL SPECIES	20	ENSGT00720000108823.g	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067.z #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470.i #14	ENSGT00940000162150 #15	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613.b	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565.g #34	ENSGT00390000001700.a.a.j #35	ENSGT00390000001700.a.a.i #35
Cebidae_a	ANCESTRAL SPECIES	9	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067.z #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470.i #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854.p #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613.a	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565.g #34	ENSGT00390000001700.a.a.j #35	ENSGT00940000160040.B #36
Capuchin	MODERN SPECIES	523			AP3D1 (ENSCCAG00000029351) #8	IZUMO4 (ENSCCAG00000020629) #10	MOB3A (ENSCCAG00000033887) #11	MKNK2 (ENSCCAG00000024690) #12	BTBD2 (ENSCCAG00000034374) #13	ENSCCAG00000037256 #14	SCAMP4 (ENSCCAG00000022838) #15	ENSCCAG00000037251	ABHD17A (ENSCCAG00000015020) #17	KLF16 (ENSCCAG00000032470) #18	REXO1 (ENSCCAG00000023485) #19	ATP8B3 (ENSCCAG00000035977) #20	ONECUT3 (ENSCCAG00000021408) #21	TCF3 (ENSCCAG00000034519) #22	UQCR11 (ENSCCAG00000035945)	MBD3 (ENSCCAG00000026526) #24	MEX3D (ENSCCAG00000028942)	PLK5 (ENSCCAG00000027893) #25	ADAMTSL5 (ENSCCAG00000030768) #26	ENSCCAG00000027022	PCSK4 (ENSCCAG00000034282) #28	C19orf25 (ENSCCAG00000030708) #29	APC2 (ENSCCAG00000032921) #30	ENSCCAG00000037411 #31	DAZAP1 (ENSCCAG00000023519) #32	GAMT (ENSCCAG00000015858) #33	NDUFS7 (ENSCCAG00000022281) #34	PWWP3A (ENSCCAG00000033218) #35	FAM174C (ENSCCAG00000013971) #37
Bolivian squirrel monkey	MODERN SPECIES	257																TCF3 (ENSSBOG00000030851) #22	UQCR11 (ENSSBOG00000032342)	MBD3 (ENSSBOG00000031286) #24	ADAMTSL5 (ENSSBOG00000021903) #26	REEP6 (ENSSBOG00000020437) #27	PCSK4 (ENSSBOG00000024249) #28	C19orf25 (ENSSBOG00000010299) #29	APC2 (ENSSBOG00000021621) #30	ENSSBOG00000024826 #31	DAZAP1 (ENSSBOG00000021919) #32	GAMT (ENSSBOG00000027810) #33	NDUFS7 (ENSSBOG00000019157) #34	ENSSBOG00000021211 #35	EFNA2 (ENSSBOG00000022012) #36	CIRBP (ENSSBOG00000021043)	MIDN (ENSSBOG00000029421)
Marmoset	MODERN SPECIES	14	JSRP1 (ENSCJAG00000013217)	AMH (ENSCJAG00000013212)	SF3A2 (ENSCJAG00000013206)	PLEKHJ1 (ENSCJAG00000041206)	DOT1L (ENSCJAG00000013182) #7	AP3D1 (ENSCJAG00000013091) #8	IZUMO4 (ENSCJAG00000013059) #10	MOB3A (ENSCJAG00000013051) #11	MKNK2 (ENSCJAG00000000539) #12	BTBD2 (ENSCJAG00000021486) #13	SCAMP4 (ENSCJAG00000021478) #15	ABHD17A (ENSCJAG00000036983) #17	KLF16 (ENSCJAG00000042076) #18	REXO1 (ENSCJAG00000021468) #19	ATP8B3 (ENSCJAG00000082985) #20	TCF3 (ENSCJAG00000004642) #22	UQCR11 (ENSCJAG00000075823)	MBD3 (ENSCJAG00000073603) #24	MEX3D (ENSCJAG00000084941)	ENSCJAG00000084898 #25	ADAMTSL5 (ENSCJAG00000038452) #26	REEP6 (ENSCJAG00000005705) #27	C19orf25 (ENSCJAG00000038129) #29	APC2 (ENSCJAG00000075116) #30	RPS15 (ENSCJAG00000005632) #31	GAMT (ENSCJAG00000005596) #33	NDUFS7 (ENSCJAG00000005587) #34	PWWP3A (ENSCJAG00000005556) #35	EFNA2 (ENSCJAG00000086835) #36	FAM174C (ENSCJAG00000005541) #37	ENSCJAG00000005609
Strepsirrhini	ANCESTRAL SPECIES	26	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT01030000235617	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565.e #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Lemuriformes	ANCESTRAL SPECIES	22	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT01030000235617	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565.e #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Mouse lemur	MODERN SPECIES	16	SF3A2 (ENSMICG00000015443)	PLEKHJ1 (ENSMICG00000015433)	DOT1L (ENSMICG00000015405) #7	AP3D1 (ENSMICG00000015375) #8	IZUMO4 (ENSMICG00000015347) #10	MOB3A (ENSMICG00000033261) #11	MKNK2 (ENSMICG00000033378) #12	BTBD2 (ENSMICG00000011570) #13	CSNK1G2 (ENSMICG00000004391) #14	SCAMP4 (ENSMICG00000047295) #15	ABHD17A (ENSMICG00000013508) #17	KLF16 (ENSMICG00000044271) #18	REXO1 (ENSMICG00000013476) #19	ATP8B3 (ENSMICG00000013417) #20	ONECUT3 (ENSMICG00000031491) #21	TCF3 (ENSMICG00000008921) #22	UQCR11 (ENSMICG00000047280)	MBD3 (ENSMICG00000000808) #24	MEX3D (ENSMICG00000036648)	ENSMICG00000034085 #25	ADAMTSL5 (ENSMICG00000031338) #26	REEP6 (ENSMICG00000032194) #27	PCSK4 (ENSMICG00000038124) #28	ENSMICG00000016127	APC2 (ENSMICG00000029619) #30	ENSMICG00000003586 #31	DAZAP1 (ENSMICG00000003579) #32	GAMT (ENSMICG00000044941) #33	NDUFS7 (ENSMICG00000032987) #34	PWWP3A (ENSMICG00000003892) #35	EFNA2 (ENSMICG00000027470) #36
Lemuriformes_a	ANCESTRAL SPECIES	17	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT01030000235617	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565.e #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Greater bamboo lemur	MODERN SPECIES	235							ENSPSMG00000009200 #14	SCAMP4 (ENSPSMG00000009192) #15	ADAT3 (ENSPSMG00000009175)	ABHD17A (ENSPSMG00000009170) #17	ENSPSMG00000009166 #18	REXO1 (ENSPSMG00000009153) #19	ENSPSMG00000009131	ENSPSMG00000009127 #20	ONECUT3 (ENSPSMG00000009114) #21	TCF3 (ENSPSMG00000008945) #22	UQCR11 (ENSPSMG00000008817)	MBD3 (ENSPSMG00000008812) #24	MEX3D (ENSPSMG00000008800)	ENSPSMG00000008787 #25	ENSPSMG00000008744 #25	ADAMTSL5 (ENSPSMG00000008733) #26	REEP6 (ENSPSMG00000008710) #27	PCSK4 (ENSPSMG00000008688) #28	ENSPSMG00000008671	APC2 (ENSPSMG00000008665) #30	RPS15 (ENSPSMG00000008637) #31	DAZAP1 (ENSPSMG00000008439) #32	ENSPSMG00000008216 #33	ENSPSMG00000008197 #34
Coquerels sifaka	MODERN SPECIES	334	JSRP1 (ENSPCOG00000022471)	AMH (ENSPCOG00000026957)	SF3A2 (ENSPCOG00000020295)	PLEKHJ1 (ENSPCOG00000025927)	DOT1L (ENSPCOG00000021587) #7	AP3D1 (ENSPCOG00000024123) #8	IZUMO4 (ENSPCOG00000024028) #10	MOB3A (ENSPCOG00000010544) #11	MKNK2 (ENSPCOG00000022360) #12	BTBD2 (ENSPCOG00000025411) #13	CSNK1G2 (ENSPCOG00000015810) #14	SCAMP4 (ENSPCOG00000018936) #15	ABHD17A (ENSPCOG00000023714) #17	REXO1 (ENSPCOG00000019892) #19	ATP8B3 (ENSPCOG00000025605) #20	TCF3 (ENSPCOG00000027425) #22	UQCR11 (ENSPCOG00000026328)	MBD3 (ENSPCOG00000021647) #24	MEX3D (ENSPCOG00000021111)	PLK5 (ENSPCOG00000005454) #25	ADAMTSL5 (ENSPCOG00000020535) #26	REEP6 (ENSPCOG00000000661) #27	PCSK4 (ENSPCOG00000024565) #28	ENSPCOG00000016037	APC2 (ENSPCOG00000023694) #30	ENSPCOG00000026500 #31	DAZAP1 (ENSPCOG00000028522) #32	GAMT (ENSPCOG00000027611) #33	NDUFS7 (ENSPCOG00000016946) #34	PWWP3A (ENSPCOG00000015144) #35	EFNA2 (ENSPCOG00000018875) #36
Bushbaby	MODERN SPECIES	144	PLEKHJ1 (ENSOGAG00000016478)	DOT1L (ENSOGAG00000003711) #7	AP3D1 (ENSOGAG00000014366) #8	IZUMO4 (ENSOGAG00000014364) #10	MOB3A (ENSOGAG00000014362) #11	MKNK2 (ENSOGAG00000008046) #12	BTBD2 (ENSOGAG00000005659) #13	ENSOGAG00000013248 #14	SCAMP4 (ENSOGAG00000028724) #15	ADAT3 (ENSOGAG00000013214)	ABHD17A (ENSOGAG00000013209) #17	KLF16 (ENSOGAG00000034621) #18	REXO1 (ENSOGAG00000027475) #19	ATP8B3 (ENSOGAG00000015639) #20	ONECUT3 (ENSOGAG00000030667) #21	TCF3 (ENSOGAG00000003587) #22	UQCR11 (ENSOGAG00000003586)	MBD3 (ENSOGAG00000024563) #24	MEX3D (ENSOGAG00000032843)	ENSOGAG00000027767 #25	ADAMTSL5 (ENSOGAG00000000237) #26	REEP6 (ENSOGAG00000000236) #27	PCSK4 (ENSOGAG00000029851) #28	APC2 (ENSOGAG00000031543) #30	ENSOGAG00000015776 #31	DAZAP1 (ENSOGAG00000000232) #32	GAMT (ENSOGAG00000032687) #33	NDUFS7 (ENSOGAG00000034777) #34	PWWP3A (ENSOGAG00000003403) #35	EFNA2 (ENSOGAG00000003380) #36	CIRBP (ENSOGAG00000029550)
Euarchontoglires_A	ANCESTRAL SPECIES	24	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000162150 #15	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Glires	ANCESTRAL SPECIES	25	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000162150 #15	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Lagomorpha	ANCESTRAL SPECIES	395																ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613
Pika	MODERN SPECIES	3857																ENSOPRG00000008737 #22	UQCR11 (ENSOPRG00000008731)	MBD3 (ENSOPRG00000008719) #24	ENSOPRG00000008708
Rabbit	MODERN SPECIES	773														ENSOCUG00000036144	ENSOCUG00000029562	ENSOCUG00000024177 #22
Rodentia	ANCESTRAL SPECIES	17	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Sciuridae	ANCESTRAL SPECIES	23	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Marmotini	ANCESTRAL SPECIES	24	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a.e #35	ENSGT00940000160040.B #36
Marmotini_b	ANCESTRAL SPECIES	9	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a.e #35	ENSGT00940000160040.B #36
Squirrel	MODERN SPECIES	188	SF3A2 (ENSSTOG00000007495)	PLEKHJ1 (ENSSTOG00000026258)	DOT1L (ENSSTOG00000011582) #7	AP3D1 (ENSSTOG00000014617) #8	IZUMO4 (ENSSTOG00000027805) #10	MOB3A (ENSSTOG00000024368) #11	MKNK2 (ENSSTOG00000012438) #12	BTBD2 (ENSSTOG00000024537) #13	CSNK1G2 (ENSSTOG00000022495) #14	SCAMP4 (ENSSTOG00000028842) #15	ABHD17A (ENSSTOG00000004712) #17	ENSSTOG00000033169 #18	REXO1 (ENSSTOG00000003257) #19	ATP8B3 (ENSSTOG00000021249) #20	ONECUT3 (ENSSTOG00000027380) #21	TCF3 (ENSSTOG00000010293) #22	UQCR11 (ENSSTOG00000021241)	MBD3 (ENSSTOG00000015870) #24	MEX3D (ENSSTOG00000025299)	ENSSTOG00000028771 #25	ADAMTSL5 (ENSSTOG00000009230) #26	REEP6 (ENSSTOG00000033173) #27	PCSK4 (ENSSTOG00000021951) #28	ENSSTOG00000027373 #29	APC2 (ENSSTOG00000024833) #30	RPS15 (ENSSTOG00000006423) #31	DAZAP1 (ENSSTOG00000006401) #32	GAMT (ENSSTOG00000022698) #33	NDUFS7 (ENSSTOG00000020105) #34	PWWP3A (ENSSTOG00000000148) #35	EFNA2 (ENSSTOG00000026755) #36
Arctic ground squirrel	MODERN SPECIES	603																TCF3 (ENSUPAG00010013147) #22	UQCR11 (ENSUPAG00010013177)	MBD3 (ENSUPAG00010013180) #24	MEX3D (ENSUPAG00010013193)	ENSUPAG00010013203 #25	ADAMTSL5 (ENSUPAG00010013226) #26	PCSK4 (ENSUPAG00010013254) #28	REEP6 (ENSUPAG00010013266) #27	C19orf25 (ENSUPAG00010013296) #29	APC2 (ENSUPAG00010013306) #30	RPS15 (ENSUPAG00010013359) #31	DAZAP1 (ENSUPAG00010013372) #32	NDUFS7 (ENSUPAG00010013413) #34	GAMT (ENSUPAG00010013430) #33	PWWP3A (ENSUPAG00010013442) #35	EFNA2 (ENSUPAG00010013457) #36
Eurasian red squirrel	MODERN SPECIES	7	ENSSVLG00005020712 #8	AP3D1 (ENSSVLG00005020646) #8	IZUMO4 (ENSSVLG00005020559) #10	MOB3A (ENSSVLG00005020512) #11	MKNK2 (ENSSVLG00005020381) #12	BTBD2 (ENSSVLG00005020278) #13	CSNK1G2 (ENSSVLG00005020222) #14	SCAMP4 (ENSSVLG00005020123) #15	ABHD17A (ENSSVLG00005020039) #17	KLF16 (ENSSVLG00005019996) #18	ENSSVLG00005019938	ENSSVLG00005019814 #19	ENSSVLG00005019753 #20	ENSSVLG00005019621 #20	ONECUT3 (ENSSVLG00005019576) #21	TCF3 (ENSSVLG00005019501) #22	UQCR11 (ENSSVLG00005019254)	MBD3 (ENSSVLG00005019133) #24	MEX3D (ENSSVLG00005019086)	PLK5 (ENSSVLG00005018817) #25	ADAMTSL5 (ENSSVLG00005018762) #26	REEP6 (ENSSVLG00005018721) #27	PCSK4 (ENSSVLG00005018300) #28	C19orf25 (ENSSVLG00005018258) #29	APC2 (ENSSVLG00005017604) #30	RPS15 (ENSSVLG00005017411) #31	DAZAP1 (ENSSVLG00005017301) #32	GAMT (ENSSVLG00005017199) #33	NDUFS7 (ENSSVLG00005016984) #34	ENSSVLG00005016943 #35	EFNA2 (ENSSVLG00005016887) #36
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Naked mole-rat female	MODERN SPECIES	21	DOT1L (ENSHGLG00000013977) #7	AP3D1 (ENSHGLG00000018179) #8	IZUMO4 (ENSHGLG00000045153) #10	MOB3A (ENSHGLG00000033345) #11	ENSHGLG00000040780	MKNK2 (ENSHGLG00000045644) #12	BTBD2 (ENSHGLG00000013706) #13	ENSHGLG00000040593	CSNK1G2 (ENSHGLG00000013947) #14	SCAMP4 (ENSHGLG00000017794) #15	ABHD17A (ENSHGLG00000047885) #17	KLF16 (ENSHGLG00000032359) #18	REXO1 (ENSHGLG00000009363) #19	ATP8B3 (ENSHGLG00000012356) #20	ONECUT3 (ENSHGLG00000006096) #21	TCF3 (ENSHGLG00000006992) #22	UQCR11 (ENSHGLG00000042586)	MBD3 (ENSHGLG00000018023) #24	MEX3D (ENSHGLG00000043689)	ENSHGLG00000032262	ENSHGLG00000015198 #25	ADAMTSL5 (ENSHGLG00000005884) #26	REEP6 (ENSHGLG00000008175) #27	PCSK4 (ENSHGLG00000047722) #28	C19orf25 (ENSHGLG00000010653) #29	APC2 (ENSHGLG00000018187) #30	RPS15 (ENSHGLG00000046613) #31	DAZAP1 (ENSHGLG00000017518) #32	GAMT (ENSHGLG00000017891) #33	NDUFS7 (ENSHGLG00000035555) #34	PWWP3A (ENSHGLG00000007232) #35
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb.ec #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Hystricomorpha_b	ANCESTRAL SPECIES	17	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb.ec #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Long-tailed chinchilla	MODERN SPECIES	202	SF3A2 (ENSCLAG00000008987)	PLEKHJ1 (ENSCLAG00000009663)	DOT1L (ENSCLAG00000014227) #7	AP3D1 (ENSCLAG00000011465) #8	IZUMO4 (ENSCLAG00000014821) #10	MOB3A (ENSCLAG00000014306) #11	MKNK2 (ENSCLAG00000011365) #12	BTBD2 (ENSCLAG00000011757) #13	CSNK1G2 (ENSCLAG00000013855) #14	SCAMP4 (ENSCLAG00000006742) #15	ABHD17A (ENSCLAG00000007148) #17	ENSCLAG00000007739 #18	REXO1 (ENSCLAG00000013515) #19	ATP8B3 (ENSCLAG00000010582) #20	MBD3 (ENSCLAG00000008294) #24	TCF3 (ENSCLAG00000012013) #22	UQCR11 (ENSCLAG00000015392)	ENSCLAG00000017344 #25	PCSK4 (ENSCLAG00000008632) #28	C19orf25 (ENSCLAG00000007022) #29	APC2 (ENSCLAG00000009831) #30	ENSCLAG00000007248 #31	DAZAP1 (ENSCLAG00000009221) #32	GAMT (ENSCLAG00000007529) #33	NDUFS7 (ENSCLAG00000006766) #34	PWWP3A (ENSCLAG00000007894) #35	EFNA2 (ENSCLAG00000010919) #36	FAM174C (ENSCLAG00000015738) #37	CIRBP (ENSCLAG00000016087)	ENSCLAG00000006930	ATP5F1D (ENSCLAG00000008150)
Degu	MODERN SPECIES	91	ENSODEG00000020086	AP3D1 (ENSODEG00000013899) #8	IZUMO4 (ENSODEG00000013972) #10	MOB3A (ENSODEG00000013513) #11	MKNK2 (ENSODEG00000013380) #12	BTBD2 (ENSODEG00000012981) #13	CSNK1G2 (ENSODEG00000012762) #14	SCAMP4 (ENSODEG00000015959) #15	ADAT3 (ENSODEG00000013157)	ABHD17A (ENSODEG00000014511) #17	ENSODEG00000013602 #18	REXO1 (ENSODEG00000013331) #19	ATP8B3 (ENSODEG00000013054) #20	ENSODEG00000014280 #21	ENSODEG00000012942	TCF3 (ENSODEG00000014758) #22	UQCR11 (ENSODEG00000013639)	MBD3 (ENSODEG00000012920) #24	MEX3D (ENSODEG00000012631)	ENSODEG00000013655 #25	ADAMTSL5 (ENSODEG00000013936) #26	REEP6 (ENSODEG00000014025) #27	PCSK4 (ENSODEG00000013088) #28	C19orf25 (ENSODEG00000012919) #29	APC2 (ENSODEG00000014479) #30	ENSODEG00000013650 #31	DAZAP1 (ENSODEG00000013797) #32	GAMT (ENSODEG00000012437) #33	NDUFS7 (ENSODEG00000012622) #34	PWWP3A (ENSODEG00000012451) #35	ENSODEG00000020201
Guinea pig	MODERN SPECIES	260																TCF3 (ENSCPOG00000023586) #22	UQCR11 (ENSCPOG00000010438)	MBD3 (ENSCPOG00000026210) #24	ENSCPOG00000009268 #25	ADAMTSL5 (ENSCPOG00000035531) #26	REEP6 (ENSCPOG00000006605) #27	PCSK4 (ENSCPOG00000009029) #28	C19orf25 (ENSCPOG00000036334) #29	APC2 (ENSCPOG00000021628) #30	ENSCPOG00000003968 #31	DAZAP1 (ENSCPOG00000020185) #32	GAMT (ENSCPOG00000036361) #33	NDUFS7 (ENSCPOG00000036781) #34	PWWP3A (ENSCPOG00000034775) #35	EFNA2 (ENSCPOG00000019291) #36	FAM174C (ENSCPOG00000038035) #37
Rodentia_B	ANCESTRAL SPECIES	28	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Kangaroo rat	MODERN SPECIES	383	Amh (ENSDORG00000014447)	Sf3a2 (ENSDORG00000014445)	Plekhj1 (ENSDORG00000024741)	Dot1l (ENSDORG00000014438) #7	Ap3d1 (ENSDORG00000009038) #8	Izumo4 (ENSDORG00000009034) #10	Mknk2 (ENSDORG00000011101) #12	Btbd2 (ENSDORG00000012931) #13	Csnk1g2 (ENSDORG00000012930) #14	ENSDORG00000028187	Scamp4 (ENSDORG00000023142) #15	Abhd17a (ENSDORG00000016211) #17	ENSDORG00000026084 #18	Rexo1 (ENSDORG00000013381) #19	Atp8b3 (ENSDORG00000013377) #20	Tcf3 (ENSDORG00000004745) #22	Uqcr11 (ENSDORG00000004744)	Mbd3 (ENSDORG00000004743) #24	Plk5 (ENSDORG00000029254) #25	Adamtsl5 (ENSDORG00000016445) #26	ENSDORG00000027460 #28	2310011J03Rik (ENSDORG00000026640) #29	Apc2 (ENSDORG00000029142) #30	ENSDORG00000029404 #31	Dazap1 (ENSDORG00000010038) #32	Gamt (ENSDORG00000010036) #33	Ndufs7 (ENSDORG00000030112) #34	Pwwp3a (ENSDORG00000010033) #35	Efna2 (ENSDORG00000006110) #36	Fam174c (ENSDORG00000029721) #37	Cirbp (ENSDORG00000023540)
Myomorpha	ANCESTRAL SPECIES	27	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Muroidea	ANCESTRAL SPECIES	32	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Muroidea_A	ANCESTRAL SPECIES	25	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Cricetidae	ANCESTRAL SPECIES	25	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Chinese hamster chok1gshd	MODERN SPECIES	2	Plekhj1 (ENSCGRG00001024439)	Dot1l (ENSCGRG00001023955) #7	Ap3d1 (ENSCGRG00001021701) #8	Izumo4 (ENSCGRG00001016288) #10	Mob3a (ENSCGRG00001013206) #11	Mknk2 (ENSCGRG00001006935) #12	Btbd2 (ENSCGRG00001020887) #13	Csnk1g2 (ENSCGRG00001023282) #14	Scamp4 (ENSCGRG00001019580) #15	ENSCGRG00001009781	Abhd17a (ENSCGRG00001015688) #17	Klf16 (ENSCGRG00001014949) #18	Rexo1 (ENSCGRG00001020072) #19	Atp8b3 (ENSCGRG00001016607) #20	Onecut3 (ENSCGRG00001015182) #21	Tcf3 (ENSCGRG00001007778) #22	Uqcr11 (ENSCGRG00001000921)	Mbd3 (ENSCGRG00001024592) #24	Mex3d (ENSCGRG00001023775)	Plk5 (ENSCGRG00001006053) #25	Adamtsl5 (ENSCGRG00001002103) #26	ENSCGRG00001013695 #27	Pcsk4 (ENSCGRG00001009900) #28	2310011J03Rik (ENSCGRG00001006969) #29	Apc2 (ENSCGRG00001006203) #30	ENSCGRG00001000902 #31	Gamt (ENSCGRG00001024338) #33	Ndufs7 (ENSCGRG00001016749) #34	Pwwp3a (ENSCGRG00001015037) #35	Efna2 (ENSCGRG00001006684) #36	Fam174c (ENSCGRG00001002716) #37
Golden Hamster	MODERN SPECIES	764	ENSMAUG00000016155	Dot1l (ENSMAUG00000020881) #7	Ap3d1 (ENSMAUG00000013821) #8	Izumo4 (ENSMAUG00000003317) #10	Mob3a (ENSMAUG00000020852) #11	Mknk2 (ENSMAUG00000010327) #12	Btbd2 (ENSMAUG00000016518) #13	Csnk1g2 (ENSMAUG00000008196) #14	Scamp4 (ENSMAUG00000010303) #15	ENSMAUG00000003412	Abhd17a (ENSMAUG00000018289) #17	Klf16 (ENSMAUG00000013135) #18	Rexo1 (ENSMAUG00000007218) #19	Atp8b3 (ENSMAUG00000007365) #20	Onecut3 (ENSMAUG00000020813) #21	Tcf3 (ENSMAUG00000016223) #22	Uqcr11 (ENSMAUG00000015805)	Mbd3 (ENSMAUG00000020118) #24	Mex3d (ENSMAUG00000014977)	Plk5 (ENSMAUG00000008809) #25	Adamtsl5 (ENSMAUG00000005571) #26	ENSMAUG00000011771 #27	Pcsk4 (ENSMAUG00000020195) #28	2310011J03Rik (ENSMAUG00000016300) #29	Apc2 (ENSMAUG00000021769) #30	Rps15 (ENSMAUG00000004679) #31	Dazap1 (ENSMAUG00000012188) #32	Gamt (ENSMAUG00000002429) #33	Ndufs7 (ENSMAUG00000021038) #34	Pwwp3a (ENSMAUG00000015348) #35	Efna2 (ENSMAUG00000022232) #36
Cricetidae_B	ANCESTRAL SPECIES	27	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Northern American deer mouse	MODERN SPECIES	14	Plekhj1 (ENSPEMG00000022829)	Dot1l (ENSPEMG00000023341) #7	Ap3d1 (ENSPEMG00000010230) #8	Izumo4 (ENSPEMG00000022820) #10	Mob3a (ENSPEMG00000013596) #11	Mknk2 (ENSPEMG00000023115) #12	Btbd2 (ENSPEMG00000022495) #13	Csnk1g2 (ENSPEMG00000022269) #14	Scamp4 (ENSPEMG00000018690) #15	ENSPEMG00000012417	Abhd17a (ENSPEMG00000022512) #17	ENSPEMG00000022678 #18	ENSPEMG00000021711 #19	Atp8b3 (ENSPEMG00000022146) #20	ENSPEMG00000031308 ##21	Tcf3 (ENSPEMG00000021449) #22	ENSPEMG00000028742	Mbd3 (ENSPEMG00000021768) #24	ENSPEMG00000029465	Plk5 (ENSPEMG00000022788) #25	Adamtsl5 (ENSPEMG00000023093) #26	ENSPEMG00000022173 #27	Pcsk4 (ENSPEMG00000022618) #28	2310011J03Rik (ENSPEMG00000026611) #29	Apc2 (ENSPEMG00000028979) #30	ENSPEMG00000021829 #31	Dazap1 (ENSPEMG00000022548) #32	Gamt (ENSPEMG00000021744) #33	Ndufs7 (ENSPEMG00000022966) #34	Pwwp3a (ENSPEMG00000023645) #35	Efna2 (ENSPEMG00000023699) #36
Prairie vole	MODERN SPECIES	349	Plekhj1 (ENSMOCG00000021610)	Dot1l (ENSMOCG00000019264) #7	Ap3d1 (ENSMOCG00000001862) #8	Izumo4 (ENSMOCG00000019193) #10	Mob3a (ENSMOCG00000013082) #11	Mknk2 (ENSMOCG00000012080) #12	Btbd2 (ENSMOCG00000000475) #13	Csnk1g2 (ENSMOCG00000012005) #14	Scamp4 (ENSMOCG00000010362) #15	ENSMOCG00000017384	Abhd17a (ENSMOCG00000017992) #17	Klf16 (ENSMOCG00000018828) #18	Rexo1 (ENSMOCG00000022026) #19	Atp8b3 (ENSMOCG00000005048) #20	Onecut3 (ENSMOCG00000007601) #21	Tcf3 (ENSMOCG00000014260) #22	Uqcr11 (ENSMOCG00000021141)	Mbd3 (ENSMOCG00000021527) #24	Mex3d (ENSMOCG00000010308)	Plk5 (ENSMOCG00000012878) #25	Adamtsl5 (ENSMOCG00000017103) #26	ENSMOCG00000019981 #27	Pcsk4 (ENSMOCG00000006638) #28	2310011J03Rik (ENSMOCG00000001752) #29	Apc2 (ENSMOCG00000018457) #30	Rps15 (ENSMOCG00000019754) #31	Dazap1 (ENSMOCG00000016931) #32	Gamt (ENSMOCG00000009137) #33	Ndufs7 (ENSMOCG00000020025) #34	Pwwp3a (ENSMOCG00000016458) #35	Efna2 (ENSMOCG00000018128) #36
Murinae	ANCESTRAL SPECIES	25	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Mus	ANCESTRAL SPECIES	15	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590.n #19	ENSGT00940000158590.m #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Mus_A	ANCESTRAL SPECIES	11	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590.n #19	ENSGT00940000158590.m #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Mus_B	ANCESTRAL SPECIES	10	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590.m #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Mouse	MODERN SPECIES	1	Dot1l (ENSMUSG00000061589) #7	Ap3d1 (ENSMUSG00000020198) #8	Izumo4 (ENSMUSG00000055862) #10	Mob3a (ENSMUSG00000003348) #11	Mknk2 (ENSMUSG00000020190) #12	Btbd2 (ENSMUSG00000003344) #13	Csnk1g2 (ENSMUSG00000003345) #14	Gm49322 (ENSMUSG00000035370)	Adat3 (ENSMUSG00000113640)	Scamp4 (ENSMUSG00000113949) #15	Abhd17a (ENSMUSG00000003346) #17	Klf16 (ENSMUSG00000035397) #18	Rexo1 (ENSMUSG00000047417) #19	Atp8b3 (ENSMUSG00000003341) #20	Onecut3 (ENSMUSG00000045518) #21	Tcf3 (ENSMUSG00000020167) #22	Uqcr11 (ENSMUSG00000020163)	Mbd3 (ENSMUSG00000035478) #24	Mex3d (ENSMUSG00000048696)	Plk5 (ENSMUSG00000035486) #25	Adamtsl5 (ENSMUSG00000043822) #26	Reep6 (ENSMUSG00000035504)	Pcsk4 (ENSMUSG00000020131) #28	2310011J03Rik (ENSMUSG00000020133) #29	Apc2 (ENSMUSG00000020135) #30	Rps15 (ENSMUSG00000063457) #31	Dazap1 (ENSMUSG00000069565) #32	Gamt (ENSMUSG00000020150) #33	Ndufs7 (ENSMUSG00000020153) #34	Pwwp3a (ENSMUSG00000020156) #35	Efna2 (ENSMUSG00000003070) #36
Mus_C	ANCESTRAL SPECIES	7	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590.m #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.sb.cc #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Steppe mouse	MODERN SPECIES	2340																Tcf3 (ENSMSIG00000007567) #22	Uqcr11 (ENSMSIG00000007525)	Mbd3 (ENSMSIG00000007464) #24	ENSMSIG00000007457	Plk5 (ENSMSIG00000007311) #25	Adamtsl5 (ENSMSIG00000007286) #26	Reep6 (ENSMSIG00000007219)	Pcsk4 (ENSMSIG00000007185) #28	2310011J03Rik (ENSMSIG00000007172) #29	Apc2 (ENSMSIG00000007080) #30	ENSMSIG00000007049 #31	Dazap1 (ENSMSIG00000007017) #32	Gamt (ENSMSIG00000006976) #33	Ndufs7 (ENSMSIG00000006928) #34	Pwwp3a (ENSMSIG00000006900) #35	Efna2 (ENSMSIG00000006880) #36
spretus	MODERN SPECIES	1	Dot1l (MGP_SPRETEiJ_G0016418) #7	Ap3d1 (MGP_SPRETEiJ_G0016417) #8	Izumo4 (MGP_SPRETEiJ_G0016416) #10	Mob3a (MGP_SPRETEiJ_G0016415) #11	Mknk2 (MGP_SPRETEiJ_G0016414) #12	Btbd2 (MGP_SPRETEiJ_G0016413) #13	Csnk1g2 (MGP_SPRETEiJ_G0016412) #14	Scamp4 (MGP_SPRETEiJ_G0016411) #15	MGP_SPRETEiJ_G0016410	Abhd17a (MGP_SPRETEiJ_G0016409) #17	Klf16 (MGP_SPRETEiJ_G0016408) #18	MGP_SPRETEiJ_G0016407 #19	Rexo1 (MGP_SPRETEiJ_G0016406) #19	Atp8b3 (MGP_SPRETEiJ_G0016405) #20	Onecut3 (MGP_SPRETEiJ_G0016404) #21	Tcf3 (MGP_SPRETEiJ_G0016403) #22	Uqcr11 (MGP_SPRETEiJ_G0016402)	Mbd3 (MGP_SPRETEiJ_G0016401) #24	Mex3d (MGP_SPRETEiJ_G0016400)	Plk5 (MGP_SPRETEiJ_G0016399) #25	Adamtsl5 (MGP_SPRETEiJ_G0016398) #26	MGP_SPRETEiJ_G0016397 #27	Pcsk4 (MGP_SPRETEiJ_G0016396) #28	2310011J03Rik (MGP_SPRETEiJ_G0016395) #29	Apc2 (MGP_SPRETEiJ_G0016394) #30	Rps15 (MGP_SPRETEiJ_G0016393) #31	Dazap1 (MGP_SPRETEiJ_G0016392) #32	Gamt (MGP_SPRETEiJ_G0016391) #33	Ndufs7 (MGP_SPRETEiJ_G0016390) #34	Pwwp3a (MGP_SPRETEiJ_G0016389) #35	Efna2 (MGP_SPRETEiJ_G0016388) #36
Ryukyu mouse	MODERN SPECIES	1	Dot1l (MGP_CAROLIEiJ_G0015600) #7	Ap3d1 (MGP_CAROLIEiJ_G0015599) #8	Izumo4 (MGP_CAROLIEiJ_G0015598) #10	Mob3a (MGP_CAROLIEiJ_G0015597) #11	Mknk2 (MGP_CAROLIEiJ_G0015596) #12	Btbd2 (MGP_CAROLIEiJ_G0015595) #13	Csnk1g2 (MGP_CAROLIEiJ_G0015594) #14	Scamp4 (MGP_CAROLIEiJ_G0015593) #15	MGP_CAROLIEiJ_G0015592	Abhd17a (MGP_CAROLIEiJ_G0015591) #17	Klf16 (MGP_CAROLIEiJ_G0015590) #18	MGP_CAROLIEiJ_G0015589 #19	Rexo1 (MGP_CAROLIEiJ_G0015588) #19	Atp8b3 (MGP_CAROLIEiJ_G0015587) #20	Onecut3 (MGP_CAROLIEiJ_G0015586) #21	Tcf3 (MGP_CAROLIEiJ_G0015585) #22	Uqcr11 (MGP_CAROLIEiJ_G0015584)	Mbd3 (MGP_CAROLIEiJ_G0015583) #24	Mex3d (MGP_CAROLIEiJ_G0015582)	Plk5 (MGP_CAROLIEiJ_G0015581) #25	Adamtsl5 (MGP_CAROLIEiJ_G0015580) #26	MGP_CAROLIEiJ_G0015579 #27	Pcsk4 (MGP_CAROLIEiJ_G0015578) #28	2310011J03Rik (MGP_CAROLIEiJ_G0015577) #29	Apc2 (MGP_CAROLIEiJ_G0015576) #30	Rps15 (MGP_CAROLIEiJ_G0015575) #31	Dazap1 (MGP_CAROLIEiJ_G0015574) #32	Gamt (MGP_CAROLIEiJ_G0015573) #33	Ndufs7 (MGP_CAROLIEiJ_G0015572) #34	Pwwp3a (MGP_CAROLIEiJ_G0015571) #35	Efna2 (MGP_CAROLIEiJ_G0015570) #36
Shrew mouse	MODERN SPECIES	22	Dot1l (MGP_PahariEiJ_G0031013) #7	Ap3d1 (MGP_PahariEiJ_G0031012) #8	Izumo4 (MGP_PahariEiJ_G0031011) #10	Mob3a (MGP_PahariEiJ_G0031010) #11	Mknk2 (MGP_PahariEiJ_G0031009) #12	Btbd2 (MGP_PahariEiJ_G0031008) #13	Csnk1g2 (MGP_PahariEiJ_G0031007) #14	Scamp4 (MGP_PahariEiJ_G0031006) #15	MGP_PahariEiJ_G0031005	Abhd17a (MGP_PahariEiJ_G0031004) #17	Klf16 (MGP_PahariEiJ_G0031003) #18	MGP_PahariEiJ_G0031002 #19	Rexo1 (MGP_PahariEiJ_G0031001) #19	Atp8b3 (MGP_PahariEiJ_G0031000) #20	Onecut3 (MGP_PahariEiJ_G0030999) #21	Tcf3 (MGP_PahariEiJ_G0030998) #22	Uqcr11 (MGP_PahariEiJ_G0030997)	Mbd3 (MGP_PahariEiJ_G0030996) #24	MGP_PahariEiJ_G0030995	Plk5 (MGP_PahariEiJ_G0030994) #25	Adamtsl5 (MGP_PahariEiJ_G0030993) #26	MGP_PahariEiJ_G0030992 #27	MGP_PahariEiJ_G0030991 #28	2310011J03Rik (MGP_PahariEiJ_G0030990) #29	Apc2 (MGP_PahariEiJ_G0030989) #30	Rps15 (MGP_PahariEiJ_G0030988) #31	Dazap1 (MGP_PahariEiJ_G0030987) #32	Gamt (MGP_PahariEiJ_G0030986) #33	Ndufs7 (MGP_PahariEiJ_G0030985) #34	Pwwp3a (MGP_PahariEiJ_G0030984) #35	Efna2 (MGP_PahariEiJ_G0030983) #36
Rat	MODERN SPECIES	17	Sf3a2 (ENSRNOG00000019349)	Dot1l (ENSRNOG00000032546) #7	Ap3d1 (ENSRNOG00000018977) #8	Izumo4 (ENSRNOG00000031950) #10	Mob3a (ENSRNOG00000018971) #11	Mknk2 (ENSRNOG00000029028) #12	Btbd2 (ENSRNOG00000018788) #13	Csnk1g2 (ENSRNOG00000018529) #14	Adat3 (ENSRNOG00000063591)	Scamp4 (ENSRNOG00000018271) #15	Abhd17a (ENSRNOG00000018212) #17	Klf16 (ENSRNOG00000033694) #18	Rexo1 (ENSRNOG00000017916) #19	Atp8b3 (ENSRNOG00000024975) #20	Onecut3 (ENSRNOG00000068848) #21	Tcf3 (ENSRNOG00000051499) #22	Mbd3 (ENSRNOG00000028956) #24	Mex3d (ENSRNOG00000030830)	Plk5 (ENSRNOG00000034102) #25	Adamtsl5 (ENSRNOG00000033787) #26	Reep6 (ENSRNOG00000033262) #27	Pcsk4 (ENSRNOG00000016405) #28	Apc2 (ENSRNOG00000033791) #30	Rps15 (ENSRNOG00000024603) #31	Cirbp (ENSRNOG00000031387) #32	Gamt (ENSRNOG00000024577) #33	Ndufs7 (ENSRNOG00000024568) #34	Pwwp3a (ENSRNOG00000024549) #35	Efna2 (ENSRNOG00000016203) #36	Midn (ENSRNOG00000015434)	Atp5f1d (ENSRNOG00000014625)
Upper Galilee mountains blind mole rat	MODERN SPECIES	975	Plekhj1 (ENSNGAG00000021814)	Dot1l (ENSNGAG00000022514) #7	Ap3d1 (ENSNGAG00000022567) #8	Izumo4 (ENSNGAG00000023033) #10	Mob3a (ENSNGAG00000003413) #11	Mknk2 (ENSNGAG00000007032) #12	Btbd2 (ENSNGAG00000009736) #13	Csnk1g2 (ENSNGAG00000014089) #14	Scamp4 (ENSNGAG00000023044) #15	ENSNGAG00000022254	Abhd17a (ENSNGAG00000022493) #17	Klf16 (ENSNGAG00000022068) #18	Rexo1 (ENSNGAG00000022034) #19	Atp8b3 (ENSNGAG00000021845) #20	Onecut3 (ENSNGAG00000022721) #21	Tcf3 (ENSNGAG00000008392) #22	Uqcr11 (ENSNGAG00000023282)	Mbd3 (ENSNGAG00000022652) #24	Mex3d (ENSNGAG00000021771)	Plk5 (ENSNGAG00000022869) #25	Adamtsl5 (ENSNGAG00000022185) #26	ENSNGAG00000023057 #27	Pcsk4 (ENSNGAG00000004063) #28	2310011J03Rik (ENSNGAG00000023280) #29	Apc2 (ENSNGAG00000005168) #30	Rps15 (ENSNGAG00000023415) #31	Dazap1 (ENSNGAG00000003560) #32	Gamt (ENSNGAG00000023290) #33	Ndufs7 (ENSNGAG00000001514) #34	Pwwp3a (ENSNGAG00000022211) #35	Efna2 (ENSNGAG00000023274) #36
Lesser Egyptian jerboa	MODERN SPECIES	55	Amh (ENSJJAG00000022991)	Sf3a2 (ENSJJAG00000010635)	Plekhj1 (ENSJJAG00000024092)	Dot1l (ENSJJAG00000023313) #7	Ap3d1 (ENSJJAG00000005990) #8	Izumo4 (ENSJJAG00000001324) #10	Mob3a (ENSJJAG00000014754) #11	Mknk2 (ENSJJAG00000016386) #12	ENSJJAG00000015554 #13	Csnk1g2 (ENSJJAG00000012257) #14	Scamp4 (ENSJJAG00000024085) #15	Abhd17a (ENSJJAG00000021626) #17	Klf16 (ENSJJAG00000013835) #18	Rexo1 (ENSJJAG00000023213) #19	Atp8b3 (ENSJJAG00000016029) #20	Tcf3 (ENSJJAG00000024381) #22	Uqcr11 (ENSJJAG00000005524)	Mbd3 (ENSJJAG00000013343) #24	Mex3d (ENSJJAG00000024350)	Adamtsl5 (ENSJJAG00000017720) #26	ENSJJAG00000001649 #27	Pcsk4 (ENSJJAG00000024344) #28	2310011J03Rik (ENSJJAG00000019517) #29	Apc2 (ENSJJAG00000011530) #30	Rps15 (ENSJJAG00000010009) #31	Dazap1 (ENSJJAG00000000715) #32	Gamt (ENSJJAG00000020674) #33	Ndufs7 (ENSJJAG00000021001) #34	Pwwp3a (ENSJJAG00000015661) #35	Efna2 (ENSJJAG00000011477) #36	ENSJJAG00000021928 #37
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Artiodactyla	ANCESTRAL SPECIES	23	ENSGT00390000012911	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Suina	ANCESTRAL SPECIES	16	ENSGT00390000006337	ENSGT00390000012911	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Chacoan peccary	MODERN SPECIES	770	SF3A2 (ENSCWAG00000016402)	AMH (ENSCWAG00000016349)	JSRP1 (ENSCWAG00000016309)	AP3D1 (ENSCWAG00000016236) #8	IZUMO4 (ENSCWAG00000015925) #10	MOB3A (ENSCWAG00000015887) #11	MKNK2 (ENSCWAG00000015852) #12	BTBD2 (ENSCWAG00000015791) #13	CSNK1G2 (ENSCWAG00000015761) #14	SCAMP4 (ENSCWAG00000015682) #15	ABHD17A (ENSCWAG00000015617) #17	KLF16 (ENSCWAG00000015558) #18	REXO1 (ENSCWAG00000015439) #19	ENSCWAG00000014928 #20	ONECUT3 (ENSCWAG00000014770) #21	TCF3 (ENSCWAG00000014525) #22	UQCR11 (ENSCWAG00000014466)	MBD3 (ENSCWAG00000014384) #24	MEX3D (ENSCWAG00000014340)	PLK5 (ENSCWAG00000014192) #25	ADAMTSL5 (ENSCWAG00000014096) #26	REEP6 (ENSCWAG00000014026) #27	PCSK4 (ENSCWAG00000013794) #28	C19orf25 (ENSCWAG00000013761) #29	ENSCWAG00000013722	APC2 (ENSCWAG00000013268) #30	RPS15 (ENSCWAG00000013141) #31	DAZAP1 (ENSCWAG00000013027) #32	GAMT (ENSCWAG00000012935) #33	NDUFS7 (ENSCWAG00000012869) #34	PWWP3A (ENSCWAG00000012809) #35
Pig	MODERN SPECIES	10	AMH (ENSSSCG00000035812)	JSRP1 (ENSSSCG00000031899)	AP3D1 (ENSSSCG00000040157) #8	IZUMO4 (ENSSSCG00000013455) #10	MOB3A (ENSSSCG00000032366) #11	MKNK2 (ENSSSCG00000013448) #12	BTBD2 (ENSSSCG00000013444) #13	CSNK1G2 (ENSSSCG00000013445) #14	SCAMP4 (ENSSSCG00000013446) #15	ADAT3 (ENSSSCG00000038810)	ABHD17A (ENSSSCG00000013442) #17	KLF16 (ENSSSCG00000024672) #18	REXO1 (ENSSSCG00000040624) #19	ATP8B3 (ENSSSCG00000013440) #20	ONECUT3 (ENSSSCG00000013439) #21	TCF3 (ENSSSCG00000013437) #22	UQCR11 (ENSSSCG00000013436)	MBD3 (ENSSSCG00000013435) #24	MEX3D (ENSSSCG00000021750)	ENSSSCG00000013434 #25	ADAMTSL5 (ENSSSCG00000013433) #26	ENSSSCG00000026387	PCSK4 (ENSSSCG00000024379) #28	C19orf25 (ENSSSCG00000022265) #29	APC2 (ENSSSCG00000023329) #30	RPS15 (ENSSSCG00000033169) #31	DAZAP1 (ENSSSCG00000013427) #32	GAMT (ENSSSCG00000023142) #33	ENSSSCG00000024144 #34	PWWP3A (ENSSSCG00000013426) #35	EFNA2 (ENSSSCG00000038701) #36
Artiodactyla_a	ANCESTRAL SPECIES	24	ENSGT00390000012911	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Artiodactyla_b	ANCESTRAL SPECIES	25	ENSGT00390000012911	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000012911	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299.db	ENSGT00950000183005.b.d #24	ENSGT00390000001201	ENSGT00940000160384	ENSGT00940000160036	ENSGT00940000159258	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a	ENSGT00730000111899	ENSGT00390000003420.b	ENSGT00940000161213	ENSGT00390000005318.a	ENSGT00390000004282	ENSGT00950000183104.B.a.a	ENSGT00500000044957
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00390000012911	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299.db	ENSGT00950000183005.b.d #24	ENSGT00390000001201	ENSGT00940000160384	ENSGT00940000160036	ENSGT00940000159258	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a	ENSGT00730000111899	ENSGT00390000003420.b	ENSGT00940000161213	ENSGT00390000005318.a	ENSGT00390000004282	ENSGT00950000183104.B.a.a	ENSGT00500000044957
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00390000006337	ENSGT00390000012911	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299.db	ENSGT00950000183005.b.d #24	ENSGT00390000001201	ENSGT00940000160384	ENSGT00940000160036	ENSGT00940000159258	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a	ENSGT00730000111899	ENSGT00390000003420.b	ENSGT00940000161213	ENSGT00390000005318.a	ENSGT00390000004282.d	ENSGT00950000183104.B.a.a	ENSGT00500000044957
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00390000006337	ENSGT00390000012911	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299.db	ENSGT00950000183005.b.d #24	ENSGT00390000001201	ENSGT00940000160384	ENSGT00940000160036	ENSGT00940000159258	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a	ENSGT00730000111899	ENSGT00390000003420.b	ENSGT00940000161213	ENSGT00390000005318.a	ENSGT00390000004282.d	ENSGT00950000183104.B.a.a	ENSGT00500000044957
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00720000108823	ENSGT00390000006337	ENSGT01000000221461	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299.db	ENSGT00950000183005.b.d #24	ENSGT00390000001201	ENSGT00940000160384	ENSGT00940000160036	ENSGT00940000159258	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a	ENSGT00730000111899	ENSGT00390000003420.b	ENSGT00940000161213	ENSGT00390000005318.a	ENSGT00390000004282.d	ENSGT00950000183104.B.a.a	ENSGT00500000044957
Narwhal	MODERN SPECIES	298	PLEKHJ1 (ENSMMNG00015003331)	SF3A2 (ENSMMNG00015003365)	AMH (ENSMMNG00015003387)	ENSMMNG00015003406	AP3D1 (ENSMMNG00015003439) #8	IZUMO4 (ENSMMNG00015003549) #10	MOB3A (ENSMMNG00015003604) #11	MKNK2 (ENSMMNG00015003637) #12	BTBD2 (ENSMMNG00015003741) #13	CSNK1G2 (ENSMMNG00015003886) #14	SCAMP4 (ENSMMNG00015000070) #15	ENSMMNG00015000114 #17	ENSMMNG00015000140 #18	REXO1 (ENSMMNG00015000180) #19	ENSMMNG00015000241 #20	TCF3 (ENSMMNG00015000337) #22	ENSMMNG00015000426	MBD3 (ENSMMNG00015000454) #24	MRPL54 (ENSMMNG00015000490)	APBA3 (ENSMMNG00015000514)	TJP3 (ENSMMNG00015000585)	PIP5K1C (ENSMMNG00015000718)	CACTIN (ENSMMNG00015000805)	TBXA2R (ENSMMNG00015000841)	ENSMMNG00015000865	GIPC3 (ENSMMNG00015000888)	HMG20B (ENSMMNG00015000925)	MFSD12 (ENSMMNG00015000990)	TEKTIP1 (ENSMMNG00015001041)	FZR1 (ENSMMNG00015001082)	DOHH (ENSMMNG00015001138)
Beluga whale	MODERN SPECIES	62	AMH (ENSDLEG00000015995)	ENSDLEG00000015965	ENSDLEG00000015955	AP3D1 (ENSDLEG00000015906) #8	IZUMO4 (ENSDLEG00000015890) #10	MOB3A (ENSDLEG00000015881) #11	MKNK2 (ENSDLEG00000015840) #12	BTBD2 (ENSDLEG00000015821) #13	CSNK1G2 (ENSDLEG00000015733) #14	SCAMP4 (ENSDLEG00000015708) #15	ABHD17A (ENSDLEG00000015692) #17	KLF16 (ENSDLEG00000015688) #18	REXO1 (ENSDLEG00000015623) #19	ENSDLEG00000015609 #20	ONECUT3 (ENSDLEG00000015601) #21	TCF3 (ENSDLEG00000015541) #22	ENSDLEG00000015534	MBD3 (ENSDLEG00000015523) #24	MRPL54 (ENSDLEG00000015510)	APBA3 (ENSDLEG00000015494)	TJP3 (ENSDLEG00000015460)	PIP5K1C (ENSDLEG00000015428)	CACTIN (ENSDLEG00000015406)	TBXA2R (ENSDLEG00000015397)	GIPC3 (ENSDLEG00000015384)	HMG20B (ENSDLEG00000015376)	MFSD12 (ENSDLEG00000015360)	ENSDLEG00000015356	FZR1 (ENSDLEG00000020434)	DOHH (ENSDLEG00000020431)	ENSDLEG00000020426
Vaquita	MODERN SPECIES	14	SF3A2 (ENSPSNG00000017010)	AMH (ENSPSNG00000017056)	JSRP1 (ENSPSNG00000017139)	AP3D1 (ENSPSNG00000017249) #8	ENSPSNG00000017407 #10	MOB3A (ENSPSNG00000017473) #11	MKNK2 (ENSPSNG00000017526) #12	BTBD2 (ENSPSNG00000017611) #13	CSNK1G2 (ENSPSNG00000017726) #14	SCAMP4 (ENSPSNG00000017791) #15	ADAT3 (ENSPSNG00000017868)	ENSPSNG00000017887 #17	KLF16 (ENSPSNG00000017960) #18	REXO1 (ENSPSNG00000018002) #19	ONECUT3 (ENSPSNG00000018126) #21	TCF3 (ENSPSNG00000018208) #22	MBD3 (ENSPSNG00000018406) #24	MRPL54 (ENSPSNG00000018508)	APBA3 (ENSPSNG00000018571)	TJP3 (ENSPSNG00000018690)	PIP5K1C (ENSPSNG00000019044)	CACTIN (ENSPSNG00000019192)	TBXA2R (ENSPSNG00000019240)	ENSPSNG00000009640	GIPC3 (ENSPSNG00000009792)	HMG20B (ENSPSNG00000009908)	MFSD12 (ENSPSNG00000009980)	TEKTIP1 (ENSPSNG00000010156)	FZR1 (ENSPSNG00000010251)	DOHH (ENSPSNG00000010352)	NFIC (ENSPSNG00000010514)
Dolphin	MODERN SPECIES	3261																TCF3 (ENSTTRG00000004417) #22	ENSTTRG00000004414	MBD3 (ENSTTRG00000004412) #24	MRPL54 (ENSTTRG00000004410)	APBA3 (ENSTTRG00000004405)	TJP3 (ENSTTRG00000004394)
Sperm whale	MODERN SPECIES	11	LMNB2 (ENSPCTG00005020173)	OAZ1 (ENSPCTG00005020113)	DOT1L (ENSPCTG00005020060) #7	PLEKHJ1 (ENSPCTG00005019976)	ENSPCTG00005019945	AMH (ENSPCTG00005019873)	JSRP1 (ENSPCTG00005019813)	CSNK1G2 (ENSPCTG00005019775) #14	BTBD2 (ENSPCTG00005019674) #13	MOB3A (ENSPCTG00005019638) #11	ENSPCTG00005019585 #15	ADAT3 (ENSPCTG00005019576)	ABHD17A (ENSPCTG00005019527) #17	KLF16 (ENSPCTG00005019503) #18	ONECUT3 (ENSPCTG00005019483) #21	TCF3 (ENSPCTG00005019427) #22	ENSPCTG00005019396	MBD3 (ENSPCTG00005019289) #24	MRPL54 (ENSPCTG00005019236)	APBA3 (ENSPCTG00005019206)	ENSPCTG00005019177	ENSPCTG00005019154 #15	PIP5K1C (ENSPCTG00005019009)	TLE2 (ENSPCTG00005018210)	TLE5 (ENSPCTG00005018020)	ENSPCTG00005017955	DOHH (ENSPCTG00005017916)	SMIM24 (ENSPCTG00005017813)	NFIC (ENSPCTG00005017610)	ENSPCTG00005017573	ENSPCTG00005017562
Blue whale	MODERN SPECIES	14	PLEKHJ1 (ENSBMSG00010009086)	SF3A2 (ENSBMSG00010009060)	AMH (ENSBMSG00010009045)	JSRP1 (ENSBMSG00010009029)	AP3D1 (ENSBMSG00010008996) #8	IZUMO4 (ENSBMSG00010008921) #10	MOB3A (ENSBMSG00010008890) #11	MKNK2 (ENSBMSG00010008792) #12	BTBD2 (ENSBMSG00010008773) #13	CSNK1G2 (ENSBMSG00010008746) #14	SCAMP4 (ENSBMSG00010008730) #15	ENSBMSG00010008713 #17	REXO1 (ENSBMSG00010008687) #19	ATP8B3 (ENSBMSG00010008534) #20	ONECUT3 (ENSBMSG00010008489) #21	TCF3 (ENSBMSG00010008426) #22	MBD3 (ENSBMSG00010008380) #24	MRPL54 (ENSBMSG00010008367)	APBA3 (ENSBMSG00010008350)	TJP3 (ENSBMSG00010008320)	PIP5K1C (ENSBMSG00010008234)	CACTIN (ENSBMSG00010008209)	TBXA2R (ENSBMSG00010008203)	GIPC3 (ENSBMSG00010008191)	HMG20B (ENSBMSG00010008175)	MFSD12 (ENSBMSG00010008150)	FZR1 (ENSBMSG00010008072)	DOHH (ENSBMSG00010008048)	ENSBMSG00010007983	NFIC (ENSBMSG00010007764)	CELF5 (ENSBMSG00010007695)
Pecora	ANCESTRAL SPECIES		ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Yarkand deer	MODERN SPECIES	32	HSPA4 (ENSCHYG00000013342)	ENSCHYG00000013195	AFF4 (ENSCHYG00000012961)	LEAP2 (ENSCHYG00000012912)	UQCRQ (ENSCHYG00000012886)	GDF9 (ENSCHYG00000012848)	SHROOM1 (ENSCHYG00000012543)	SOWAHA (ENSCHYG00000012503)	BTBD2 (ENSCHYG00000012402) #13	CSNK1G2 (ENSCHYG00000012240) #14	SCAMP4 (ENSCHYG00000012163) #15	ABHD17A (ENSCHYG00000012056) #17	ENSCHYG00000012027 #18	REXO1 (ENSCHYG00000011774) #19	ATP8B3 (ENSCHYG00000011251) #20	TCF3 (ENSCHYG00000010747) #22	MBD3 (ENSCHYG00000010565) #24	MEX3D (ENSCHYG00000010512)	ENSCHYG00000010460 #25	ADAMTSL5 (ENSCHYG00000010336) #26	REEP6 (ENSCHYG00000010281) #27	PCSK4 (ENSCHYG00000010186) #28	ENSCHYG00000010126 #29	APC2 (ENSCHYG00000009962) #30	ENSCHYG00000009799 #31	DAZAP1 (ENSCHYG00000009522) #32	GAMT (ENSCHYG00000009404) #33	NDUFS7 (ENSCHYG00000009337) #34	PWWP3A (ENSCHYG00000009248) #35	EFNA2 (ENSCHYG00000009190) #36	FAM174C (ENSCHYG00000009148) #37
Percora_a	ANCESTRAL SPECIES		ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299.bb	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Siberian musk deer	MODERN SPECIES	49	ZCCHC10 (ENSMMSG00000015618)	AFF4 (ENSMMSG00000015669)	LEAP2 (ENSMMSG00000015759)	UQCRQ (ENSMMSG00000015786)	GDF9 (ENSMMSG00000015798)	SHROOM1 (ENSMMSG00000015817)	ENSMMSG00000015926	BTBD2 (ENSMMSG00000015949) #13	CSNK1G2 (ENSMMSG00000015996) #14	SCAMP4 (ENSMMSG00000016040) #15	ABHD17A (ENSMMSG00000016084) #17	KLF16 (ENSMMSG00000016148) #18	REXO1 (ENSMMSG00000016192) #19	ATP8B3 (ENSMMSG00000016278) #20	ONECUT3 (ENSMMSG00000016423) #21	TCF3 (ENSMMSG00000016463) #22	ENSMMSG00000016694	MBD3 (ENSMMSG00000016718) #24	MEX3D (ENSMMSG00000016790)	ENSMMSG00000016838 #25	ADAMTSL5 (ENSMMSG00000016856) #26	REEP6 (ENSMMSG00000016902) #27	PCSK4 (ENSMMSG00000016961) #28	C19orf25 (ENSMMSG00000017161) #29	APC2 (ENSMMSG00000017190) #30	ENSMMSG00000017271 #31	DAZAP1 (ENSMMSG00000017306) #32	GAMT (ENSMMSG00000017365) #33	NDUFS7 (ENSMMSG00000017433) #34	PWWP3A (ENSMMSG00000017461) #35	EFNA2 (ENSMMSG00000017476) #36
Bovidae	ANCESTRAL SPECIES		ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299.bb	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.ac #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Caprinae	ANCESTRAL SPECIES	3	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00390000018299.cb	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00390000010706	ENSGT00940000162150 #15	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299.bb	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.ac #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Rambouillet Sheep	MODERN SPECIES	21	ZCCHC10 (ENSOARG00020021393)	AFF4 (ENSOARG00020021183)	LEAP2 (ENSOARG00020021152)	UQCRQ (ENSOARG00020021124)	GDF9 (ENSOARG00020021050)	SHROOM1 (ENSOARG00020020980)	ENSOARG00020020953	BTBD2 (ENSOARG00020020888) #13	CSNK1G2 (ENSOARG00020020862) #14	ADAT3 (ENSOARG00020020822)	SCAMP4 (ENSOARG00020020721) #15	ABHD17A (ENSOARG00020020656) #17	ENSOARG00020020598 #18	ATP8B3 (ENSOARG00020019584) #20	ONECUT3 (ENSOARG00020019503) #21	TCF3 (ENSOARG00020018273) #22	ENSOARG00020018193	MBD3 (ENSOARG00020018029) #24	MEX3D (ENSOARG00020017996)	ADAMTSL5 (ENSOARG00020017613) #26	REEP6 (ENSOARG00020017523) #27	PCSK4 (ENSOARG00020016665) #28	C19orf25 (ENSOARG00020016595) #29	APC2 (ENSOARG00020016161) #30	ENSOARG00020016079 #31	DAZAP1 (ENSOARG00020015974) #32	GAMT (ENSOARG00020015902) #33	NDUFS7 (ENSOARG00020015840) #34	PWWP3A (ENSOARG00020015787) #35	EFNA2 (ENSOARG00020015712) #36	FAM174C (ENSOARG00020015682) #37
Goat	MODERN SPECIES	26	ZCCHC10 (ENSCHIG00000021529)	AFF4 (ENSCHIG00000015153)	LEAP2 (ENSCHIG00000006437)	UQCRQ (ENSCHIG00000017488)	GDF9 (ENSCHIG00000008167)	SHROOM1 (ENSCHIG00000018420)	ENSCHIG00000023876	ENSCHIG00000010758	BTBD2 (ENSCHIG00000025498) #13	CSNK1G2 (ENSCHIG00000012053) #14	SCAMP4 (ENSCHIG00000026658) #15	ABHD17A (ENSCHIG00000017282) #17	KLF16 (ENSCHIG00000010020) #18	REXO1 (ENSCHIG00000021165) #19	ATP8B3 (ENSCHIG00000016005) #20	TCF3 (ENSCHIG00000012431) #22	UQCR11 (ENSCHIG00000008372)	MBD3 (ENSCHIG00000024579) #24	MEX3D (ENSCHIG00000012929)	ENSCHIG00000023770 #25	ENSCHIG00000017961 #26	ENSCHIG00000010385 #26	REEP6 (ENSCHIG00000025412) #27	PCSK4 (ENSCHIG00000017924) #28	C19orf25 (ENSCHIG00000015419) #29	APC2 (ENSCHIG00000017061) #30	ENSCHIG00000023211 #31	DAZAP1 (ENSCHIG00000024694) #32	GAMT (ENSCHIG00000009917) #33	NDUFS7 (ENSCHIG00000008587) #34	PWWP3A (ENSCHIG00000021735) #35
Bovinae	ANCESTRAL SPECIES	2	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463.r #20	ENSGT00940000160463.q #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299.bb	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.ac #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
American bison	MODERN SPECIES	3121	AFF4 (ENSBBBG00000007509)	LEAP2 (ENSBBBG00000018954)	UQCRQ (ENSBBBG00000004808)	GDF9 (ENSBBBG00000018948)	SHROOM1 (ENSBBBG00000004801)	BTBD2 (ENSBBBG00000004795) #13	CSNK1G2 (ENSBBBG00000018897) #14	SCAMP4 (ENSBBBG00000018882) #15	ADAT3 (ENSBBBG00000018851)	ABHD17A (ENSBBBG00000018838) #17	ENSBBBG00000004740 #18	ENSBBBG00000018815	ENSBBBG00000018805 #19	ENSBBBG00000009151 #20	ENSBBBG00000004709 #20	TCF3 (ENSBBBG00000004690) #22	UQCR11 (ENSBBBG00000018581)	MBD3 (ENSBBBG00000004588) #24	ENSBBBG00000004581 #25	ADAMTSL5 (ENSBBBG00000004574) #26	REEP6 (ENSBBBG00000018528) #27	PCSK4 (ENSBBBG00000004562) #28	C19orf25 (ENSBBBG00000018509) #29	APC2 (ENSBBBG00000018500) #30	ENSBBBG00000018471 #31	DAZAP1 (ENSBBBG00000004531) #32	GAMT (ENSBBBG00000018451) #33	NDUFS7 (ENSBBBG00000004517) #34	PWWP3A (ENSBBBG00000004507) #35	EFNA2 (ENSBBBG00000018411) #36	FAM174C (ENSBBBG00000008938) #37
Bos	ANCESTRAL SPECIES	3	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463.r #20	ENSGT00940000160463.q #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299.bb	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.ac #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Bos_b	ANCESTRAL SPECIES	2	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463.q #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299.bb	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.ac #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Cow	MODERN SPECIES	26	HSPA4 (ENSBTAG00000015683)	ZCCHC10 (ENSBTAG00000030616)	AFF4 (ENSBTAG00000009482)	LEAP2 (ENSBTAG00000018926)	UQCRQ (ENSBTAG00000009479)	GDF9 (ENSBTAG00000009478)	SHROOM1 (ENSBTAG00000014676)	BTBD2 (ENSBTAG00000016108) #13	CSNK1G2 (ENSBTAG00000016797) #14	SCAMP4 (ENSBTAG00000045762) #15	ABHD17A (ENSBTAG00000025277) #17	KLF16 (ENSBTAG00000038055) #18	REXO1 (ENSBTAG00000020232) #19	ATP8B3 (ENSBTAG00000020229) #20	ONECUT3 (ENSBTAG00000047578) #21	TCF3 (ENSBTAG00000008695) #22	UQCR11 (ENSBTAG00000008692)	MBD3 (ENSBTAG00000038409) #24	MEX3D (ENSBTAG00000040334)	ENSBTAG00000012150 #25	ADAMTSL5 (ENSBTAG00000046263) #26	REEP6 (ENSBTAG00000002311) #27	PCSK4 (ENSBTAG00000002305) #28	C7H19orf25 (ENSBTAG00000051357) #29	APC2 (ENSBTAG00000015433) #30	RPS15 (ENSBTAG00000019718) #31	DAZAP1 (ENSBTAG00000019714) #32	GAMT (ENSBTAG00000004112) #33	NDUFS7 (ENSBTAG00000019419) #34	PWWP3A (ENSBTAG00000030839) #35	EFNA2 (ENSBTAG00000038221) #36
Hybrid Bos Indicus	MODERN SPECIES	26	ZCCHC10 (ENSBIXG00005009861)	AFF4 (ENSBIXG00005009834)	LEAP2 (ENSBIXG00005000606)	UQCRQ (ENSBIXG00005000603)	ENSBIXG00005009763	SHROOM1 (ENSBIXG00005009751)	BTBD2 (ENSBIXG00005006410) #13	CSNK1G2 (ENSBIXG00005009637) #14	SCAMP4 (ENSBIXG00005009612) #15	ADAT3 (ENSBIXG00005009585)	ABHD17A (ENSBIXG00005000539) #17	KLF16 (ENSBIXG00005009542) #18	REXO1 (ENSBIXG00005009514) #19	ATP8B3 (ENSBIXG00005009458) #20	ONECUT3 (ENSBIXG00005009373) #21	TCF3 (ENSBIXG00005009347) #22	UQCR11 (ENSBIXG00005000460)	MBD3 (ENSBIXG00005000445) #24	MEX3D (ENSBIXG00005009245)	ENSBIXG00005000436 #25	ADAMTSL5 (ENSBIXG00005000429) #26	REEP6 (ENSBIXG00005000422) #27	PCSK4 (ENSBIXG00005009196) #28	C19orf25 (ENSBIXG00005009184) #29	APC2 (ENSBIXG00005009161) #30	RPS15 (ENSBIXG00005009132) #31	DAZAP1 (ENSBIXG00005009054) #32	GAMT (ENSBIXG00005009015) #33	ENSBIXG00005008985 #34	PWWP3A (ENSBIXG00005000323) #35	ENSBIXG00005000319 #36
Bos_a	ANCESTRAL SPECIES	2	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463.r #20	ENSGT00940000160463.q #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299.bb	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475.ac #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Domestic yak	MODERN SPECIES	27	GDF9 (ENSBGRG00000000431)	SHROOM1 (ENSBGRG00000000396)	SOWAHA (ENSBGRG00000018725)	ENSBGRG00000018649 #13	ENSBGRG00000018562 #13	CSNK1G2 (ENSBGRG00000018491) #14	ENSBGRG00000018385 #15	ENSBGRG00000018347	ABHD17A (ENSBGRG00000018270) #17	ENSBGRG00000018212 #18	ENSBGRG00000018133	ENSBGRG00000017850 #19	ENSBGRG00000017775 #20	ENSBGRG00000017718 #20	ONECUT3 (ENSBGRG00000017622) #21	TCF3 (ENSBGRG00000017293) #22	UQCR11 (ENSBGRG00000017215)	MBD3 (ENSBGRG00000016990) #24	MEX3D (ENSBGRG00000016912)	ENSBGRG00000016857 #25	ADAMTSL5 (ENSBGRG00000016801) #26	REEP6 (ENSBGRG00000016730) #27	PCSK4 (ENSBGRG00000016652) #28	ENSBGRG00000016616 #29	APC2 (ENSBGRG00000016072) #30	RPS15 (ENSBGRG00000015856) #31	DAZAP1 (ENSBGRG00000015677) #32	GAMT (ENSBGRG00000015533) #33	NDUFS7 (ENSBGRG00000015309) #34	PWWP3A (ENSBGRG00000015207) #35	ENSBGRG00000015098 #36
Wild yak	MODERN SPECIES	321				LEAP2 (ENSBMUG00000002519)	ENSBMUG00000002537	GDF9 (ENSBMUG00000002563)	SHROOM1 (ENSBMUG00000002597)	BTBD2 (ENSBMUG00000002669) #13	CSNK1G2 (ENSBMUG00000002714) #14	SCAMP4 (ENSBMUG00000002748) #15	ABHD17A (ENSBMUG00000002786) #17	ENSBMUG00000002805 #18	ENSBMUG00000002816 #19	ENSBMUG00000002836 #19	ATP8B3 (ENSBMUG00000002908) #20	TCF3 (ENSBMUG00000003152) #22	UQCR11 (ENSBMUG00000003220)	MBD3 (ENSBMUG00000003285) #24
Camelidae	ANCESTRAL SPECIES	36	ENSGT00390000005235	ENSGT00720000108823	ENSGT00390000012911	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT00940000180698	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000160463 #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36	ENSGT00940000153524.a
Arabian camel	MODERN SPECIES	14	JSRP1 (ENSCDRG00005010818)	ENSCDRG00005010886 #8	ENSCDRG00005010908 #8	IZUMO4 (ENSCDRG00005010985) #10	ENSCDRG00005011219	MKNK2 (ENSCDRG00005011258) #12	BTBD2 (ENSCDRG00005011331) #13	CSNK1G2 (ENSCDRG00005011384) #14	SCAMP4 (ENSCDRG00005011441) #15	ADAT3 (ENSCDRG00005011651)	ENSCDRG00005011681 #17	ENSCDRG00005011721 #18	ENSCDRG00005009175 #20	ENSCDRG00005009229 #20	ONECUT3 (ENSCDRG00005009294) #21	TCF3 (ENSCDRG00005009370) #22	UQCR11 (ENSCDRG00005009563)	MBD3 (ENSCDRG00005009596) #24	PLK5 (ENSCDRG00005010335) #25	ADAMTSL5 (ENSCDRG00005010436) #26	REEP6 (ENSCDRG00005010646) #27	PCSK4 (ENSCDRG00005010737) #28	C19orf25 (ENSCDRG00005011088) #29	APC2 (ENSCDRG00005011138) #30	ENSCDRG00005011488 #31	ENSCDRG00005011748 #32	GAMT (ENSCDRG00005011779) #33	NDUFS7 (ENSCDRG00005011846) #34	PWWP3A (ENSCDRG00005011921) #35	EFNA2 (ENSCDRG00005012098) #36	ENSCDRG00005012160
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463.n #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Carnivora	ANCESTRAL SPECIES	6	ENSGT00390000012911	ENSGT00390000006337	ENSGT00720000108823	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000160463.n #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Felidae	ANCESTRAL SPECIES	21	ENSGT00390000012911	ENSGT00390000006337	ENSGT00720000108823	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000160463.n #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Panthera	ANCESTRAL SPECIES	15	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000160463.n #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Panthera_a	ANCESTRAL SPECIES	41	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463.n #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
leopard	MODERN SPECIES	160	SF3A2 (ENSPPRG00000007798)	PLEKHJ1 (ENSPPRG00000007711)	DOT1L (ENSPPRG00000007334) #7	AP3D1 (ENSPPRG00000006942) #8	IZUMO4 (ENSPPRG00000005640) #10	MOB3A (ENSPPRG00000004839) #11	ENSPPRG00000004730 #12	ENSPPRG00000004193 #12	ENSPPRG00000004148 #13	SCAMP4 (ENSPPRG00000003391) #15	ABHD17A (ENSPPRG00000002596) #17	ENSPPRG00000002397 #18	REXO1 (ENSPPRG00000001819) #19	ATP8B3 (ENSPPRG00000001146) #20	ONECUT3 (ENSPPRG00000023224) #21	TCF3 (ENSPPRG00000023512) #22	UQCR11 (ENSPPRG00000023799)	MBD3 (ENSPPRG00000023894) #24	MEX3D (ENSPPRG00000024256)	PLK5 (ENSPPRG00000024463) #25	ADAMTSL5 (ENSPPRG00000020291) #26	REEP6 (ENSPPRG00000019745) #27	C19orf25 (ENSPPRG00000017306) #29	APC2 (ENSPPRG00000014741) #30	ENSPPRG00000013868 #31	DAZAP1 (ENSPPRG00000012584) #32	GAMT (ENSPPRG00000010816) #33	NDUFS7 (ENSPPRG00000010776) #34	PWWP3A (ENSPPRG00000010398) #35	EFNA2 (ENSPPRG00000009178) #36	FAM174C (ENSPPRG00000009094) #37
lion	MODERN SPECIES	2	SF3A2 (ENSPLOG00000005300)	PLEKHJ1 (ENSPLOG00000005236)	DOT1L (ENSPLOG00000005203) #7	AP3D1 (ENSPLOG00000005164) #8	IZUMO4 (ENSPLOG00000005008) #10	MOB3A (ENSPLOG00000004961) #11	MKNK2 (ENSPLOG00000004931) #12	CSNK1G2 (ENSPLOG00000004910) #14	SCAMP4 (ENSPLOG00000004893) #15	ADAT3 (ENSPLOG00000004891)	ABHD17A (ENSPLOG00000004876) #17	ENSPLOG00000004863 #18	ENSPLOG00000004852	ENSPLOG00000004835 #19	ATP8B3 (ENSPLOG00000004775) #20	TCF3 (ENSPLOG00000004719) #22	UQCR11 (ENSPLOG00000004693)	MBD3 (ENSPLOG00000004686) #24	MEX3D (ENSPLOG00000004682)	PLK5 (ENSPLOG00000004671) #25	ADAMTSL5 (ENSPLOG00000004655) #26	REEP6 (ENSPLOG00000004645) #27	PCSK4 (ENSPLOG00000004631) #28	C19orf25 (ENSPLOG00000004623) #29	APC2 (ENSPLOG00000004610) #30	ENSPLOG00000004578 #31	DAZAP1 (ENSPLOG00000004550) #32	GAMT (ENSPLOG00000004531) #33	NDUFS7 (ENSPLOG00000004518) #34	PWWP3A (ENSPLOG00000004495) #35	FAM174C (ENSPLOG00000007983) #37
Cat	MODERN SPECIES	1	PLEKHJ1 (ENSFCAG00000045112)	DOT1L (ENSFCAG00000008606) #7	AP3D1 (ENSFCAG00000033810) #8	IZUMO4 (ENSFCAG00000012090) #10	MOB3A (ENSFCAG00000006047) #11	MKNK2 (ENSFCAG00000012087) #12	BTBD2 (ENSFCAG00000031271) #13	CSNK1G2 (ENSFCAG00000027920) #14	SCAMP4 (ENSFCAG00000038494) #15	ABHD17A (ENSFCAG00000002443) #17	KLF16 (ENSFCAG00000046707) #18	ENSFCAG00000047008	ENSFCAG00000035720 #19	ATP8B3 (ENSFCAG00000002436) #20	ONECUT3 (ENSFCAG00000043452) #21	TCF3 (ENSFCAG00000023514) #22	UQCR11 (ENSFCAG00000002620)	MBD3 (ENSFCAG00000000763) #24	MEX3D (ENSFCAG00000043755)	ENSFCAG00000001784 #25	ADAMTSL5 (ENSFCAG00000001783) #26	REEP6 (ENSFCAG00000023492) #27	PCSK4 (ENSFCAG00000042231) #28	CA2H19orf25 (ENSFCAG00000001782) #29	APC2 (ENSFCAG00000040625) #30	ENSFCAG00000038889 #31	DAZAP1 (ENSFCAG00000010767) #32	NDUFS7 (ENSFCAG00000032042) #34	GAMT (ENSFCAG00000010765) #33	PWWP3A (ENSFCAG00000009428) #35	EFNA2 (ENSFCAG00000042105) #36
Caniformia	ANCESTRAL SPECIES	4	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463.n #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Canidae	DUPLICATION
Canidae	ANCESTRAL SPECIES		ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463.n #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036.a #22	ENSGT00940000160463.m.b #20	ENSGT00940000157036.b #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00720000108823	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463.n #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036.a #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Dingo	MODERN SPECIES	112	AMH (ENSCAFG00020018157)	SF3A2 (ENSCAFG00020018153)	PLEKHJ1 (ENSCAFG00020018140)	DOT1L (ENSCAFG00020017984) #7	AP3D1 (ENSCAFG00020017366) #8	IZUMO4 (ENSCAFG00020017320) #10	MOB3A (ENSCAFG00020017318) #11	MKNK2 (ENSCAFG00020017316) #12	BTBD2 (ENSCAFG00020017301) #13	CSNK1G2 (ENSCAFG00020017292) #14	ENSCAFG00020017287 #15	ABHD17A (ENSCAFG00020017284) #17	KLF16 (ENSCAFG00020017282) #18	REXO1 (ENSCAFG00020017276) #19	ENSCAFG00020017270 #20	TCF3 (ENSCAFG00020017249) #22	UQCR11 (ENSCAFG00020017248)	MBD3 (ENSCAFG00020017247) #24	MEX3D (ENSCAFG00020017245)	ENSCAFG00020017233 #25	ADAMTSL5 (ENSCAFG00020017226) #26	ENSCAFG00020017223 #27	PCSK4 (ENSCAFG00020017206) #28	C19orf25 (ENSCAFG00020017204) #29	APC2 (ENSCAFG00020017201) #30	ENSCAFG00020017177 #31	DAZAP1 (ENSCAFG00020017166) #32	GAMT (ENSCAFG00020017160) #33	NDUFS7 (ENSCAFG00020017154) #34	ENSCAFG00020017148 #35	EFNA2 (ENSCAFG00020017145) #36
Dog	MODERN SPECIES	12	SF3A2 (ENSCAFG00845012454)	PLEKHJ1 (ENSCAFG00845012497)	DOT1L (ENSCAFG00845012642) #7	AP3D1 (ENSCAFG00845013005) #8	IZUMO4 (ENSCAFG00845013212) #10	MOB3A (ENSCAFG00845013271) #11	MKNK2 (ENSCAFG00845013328) #12	BTBD2 (ENSCAFG00845013407) #13	CSNK1G2 (ENSCAFG00845013481) #14	ENSCAFG00845013591 #15	ABHD17A (ENSCAFG00845013636) #17	ENSCAFG00845013662 #18	REXO1 (ENSCAFG00845013697) #19	ENSCAFG00845013801 #20	ONECUT3 (ENSCAFG00845013993) #21	TCF3 (ENSCAFG00845014070) #22	UQCR11 (ENSCAFG00845014167)	MBD3 (ENSCAFG00845014226) #24	MEX3D (ENSCAFG00845014280)	PLK5 (ENSCAFG00845014316) #25	ENSCAFG00845011859 #26	REEP6 (ENSCAFG00845011929) #27	PCSK4 (ENSCAFG00845012009) #28	C20H19orf25 (ENSCAFG00845012299) #29	APC2 (ENSCAFG00845012329) #30	ENSCAFG00845012383 #31	DAZAP1 (ENSCAFG00845012456) #32	GAMT (ENSCAFG00845012536) #33	NDUFS7 (ENSCAFG00845012618) #34	PWWP3A (ENSCAFG00845012692) #35	EFNA2 (ENSCAFG00845012831) #36
Red fox	MODERN SPECIES	488																ENSVVUG00000003022 #22
Canidae	ANCESTRAL SPECIES		ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463.n #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036.a #22	ENSGT00940000160463.m.b #20	ENSGT00940000157036.b #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Red fox	MODERN SPECIES	163	PLEKHJ1 (ENSVVUG00000002554)	DOT1L (ENSVVUG00000002530) #7	AP3D1 (ENSVVUG00000002492) #8	IZUMO4 (ENSVVUG00000002473) #10	MOB3A (ENSVVUG00000002458) #11	MKNK2 (ENSVVUG00000002443) #12	ENSVVUG00000002430 #13	CSNK1G2 (ENSVVUG00000002295) #14	SCAMP4 (ENSVVUG00000002257) #15	ADAT3 (ENSVVUG00000002254)	ABHD17A (ENSVVUG00000002249) #17	ENSVVUG00000002241 #18	REXO1 (ENSVVUG00000001385) #19	ENSVVUG00000023553 #20	ENSVVUG00000023546 #20	ENSVVUG00000022985 #22	UQCR11 (ENSVVUG00000022949)	MBD3 (ENSVVUG00000022947) #24	ENSVVUG00000022924 #25	ADAMTSL5 (ENSVVUG00000022913) #26	REEP6 (ENSVVUG00000022911) #27	PCSK4 (ENSVVUG00000022904) #28	ENSVVUG00000022901	APC2 (ENSVVUG00000022884) #30	ENSVVUG00000022875 #31	DAZAP1 (ENSVVUG00000022865) #32	GAMT (ENSVVUG00000022859) #33	ENSVVUG00000022856 #34	PWWP3A (ENSVVUG00000022851) #35	EFNA2 (ENSVVUG00000022847) #36	FAM174C (ENSVVUG00000022846) #37
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00720000108823	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463.n #20	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493.n #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00530000064649 #37	ENSGT00940000153524.a
Mustelinae	ANCESTRAL SPECIES	19	ENSGT00720000108823	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463.n #20	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493.n #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000153524.a	ENSGT00510000049027.c	ENSGT00390000017576
American mink	MODERN SPECIES	175	AMH (ENSNVIG00000005195)	SF3A2 (ENSNVIG00000005193)	ENSNVIG00000005138	DOT1L (ENSNVIG00000005125) #7	AP3D1 (ENSNVIG00000005089) #8	IZUMO4 (ENSNVIG00000005013) #10	ENSNVIG00000005005 #11	MKNK2 (ENSNVIG00000004977) #12	ENSNVIG00000004964	CSNK1G2 (ENSNVIG00000004949) #14	SCAMP4 (ENSNVIG00000004947) #15	ABHD17A (ENSNVIG00000004930) #17	ENSNVIG00000004925 #18	REXO1 (ENSNVIG00000004894) #19	ATP8B3 (ENSNVIG00000004776) #20	TCF3 (ENSNVIG00000004526) #22	UQCR11 (ENSNVIG00000004502)	MBD3 (ENSNVIG00000004491) #24	PLK5 (ENSNVIG00000004473) #25	ADAMTSL5 (ENSNVIG00000004460) #26	ENSNVIG00000004400 #27	C19orf25 (ENSNVIG00000004386) #29	PCSK4 (ENSNVIG00000004231) #28	APC2 (ENSNVIG00000004214) #30	DAZAP1 (ENSNVIG00000004159) #32	GAMT (ENSNVIG00000004135) #33	NDUFS7 (ENSNVIG00000004129) #34	PWWP3A (ENSNVIG00000004076) #35	ENSNVIG00000004065	MIDN (ENSNVIG00000004052)	ATP5F1D (ENSNVIG00000004033)
Ferret	MODERN SPECIES	427	DOT1L (ENSMPUG00000006962) #7	ENSMPUG00000006983	AP3D1 (ENSMPUG00000006989) #8	IZUMO4 (ENSMPUG00000007007) #10	MOB3A (ENSMPUG00000007042) #11	MKNK2 (ENSMPUG00000007049) #12	ENSMPUG00000007157 #13	CSNK1G2 (ENSMPUG00000007278) #14	ENSMPUG00000019982	SCAMP4 (ENSMPUG00000007438) #15	ADAT3 (ENSMPUG00000019983)	ABHD17A (ENSMPUG00000007482) #17	ENSMPUG00000007504	REXO1 (ENSMPUG00000007507) #19	ATP8B3 (ENSMPUG00000007522) #20	TCF3 (ENSMPUG00000008024) #22	ENSMPUG00000019985	ENSMPUG00000008040	MBD3 (ENSMPUG00000008045) #24	ENSMPUG00000008059	ENSMPUG00000008064 #25	ADAMTSL5 (ENSMPUG00000008077) #26	REEP6 (ENSMPUG00000008119) #27	PCSK4 (ENSMPUG00000008172) #28	C19orf25 (ENSMPUG00000008182) #29	APC2 (ENSMPUG00000008189) #30	DAZAP1 (ENSMPUG00000008203) #32	GAMT (ENSMPUG00000008211) #33	NDUFS7 (ENSMPUG00000008260) #34	PWWP3A (ENSMPUG00000008330) #35	ENSMPUG00000008455
Ursidae	ANCESTRAL SPECIES	20	ENSGT00960000190456	ENSGT01040000242195	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00950000185514	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00390000010706	ENSGT00940000162150 #15	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463.n #20	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493.n #27	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565.d #34	ENSGT00390000001700.a.a #35	ENSGT00530000064649 #37	ENSGT00940000153524.a	ENSGT00510000049027.c
Ursus	ANCESTRAL SPECIES	16	ENSGT00390000012911	ENSGT00720000108823	ENSGT00960000190456	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00950000185514	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00940000155854 #17	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463.n #20	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493.n #27	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000164065.b	ENSGT00910000148474	ENSGT00940000154389.a	ENSGT00390000000217	ENSGT00940000153259.a.b	ENSGT00940000160405.b	ENSGT00940000155238
American black bear	MODERN SPECIES	195																TCF3 (ENSUAMG00000014722) #22	UQCR11 (ENSUAMG00000014717)	MBD3 (ENSUAMG00000014715) #24
Polar bear	MODERN SPECIES	455	GADD45B (ENSUMAG00000006840)	ENSUMAG00000006827	ENSUMAG00000006808	SPPL2B (ENSUMAG00000006607)	LSM7 (ENSUMAG00000006556)	SF3A2 (ENSUMAG00000006547)	AP3D1 (ENSUMAG00000006248) #8	ENSUMAG00000006190	MOB3A (ENSUMAG00000006173) #11	MKNK2 (ENSUMAG00000006047) #12	SCAMP4 (ENSUMAG00000006028) #15	ABHD17A (ENSUMAG00000006008) #17	ENSUMAG00000005999	ENSUMAG00000005985 #19	ENSUMAG00000005937 #20	TCF3 (ENSUMAG00000005911) #22	ENSUMAG00000005903	MBD3 (ENSUMAG00000005895) #24	ENSUMAG00000005885 #26	ENSUMAG00000005882	C19orf25 (ENSUMAG00000005875) #29	DAZAP1 (ENSUMAG00000005845) #32	GAMT (ENSUMAG00000005814) #33	ENSUMAG00000005808 #34	ENSUMAG00000005803 #35	ENSUMAG00000005800 #35	ENSUMAG00000005798	CIRBP (ENSUMAG00000005794)	ATP5F1D (ENSUMAG00000005780)	STK11 (ENSUMAG00000005728)	SBNO2 (ENSUMAG00000005695)
Giant Panda	MODERN SPECIES	14	ENSAMEG00000030008	AMH (ENSAMEG00000005474)	SF3A2 (ENSAMEG00000005469)	ENSAMEG00000031083	DOT1L (ENSAMEG00000005436) #7	IZUMO4 (ENSAMEG00000005317) #10	AP3D1 (ENSAMEG00000005331) #8	MKNK2 (ENSAMEG00000005272) #12	ENSAMEG00000029694 #13	CSNK1G2 (ENSAMEG00000005228) #14	ADAT3 (ENSAMEG00000005218)	ABHD17A (ENSAMEG00000005209) #17	ENSAMEG00000025986 #18	REXO1 (ENSAMEG00000005178) #19	ATP8B3 (ENSAMEG00000005122) #20	TCF3 (ENSAMEG00000003503) #22	UQCR11 (ENSAMEG00000003502)	MBD3 (ENSAMEG00000003491) #24	PLK5 (ENSAMEG00000026228) #25	ADAMTSL5 (ENSAMEG00000003454) #26	REEP6 (ENSAMEG00000003018) #27	C19orf25 (ENSAMEG00000003409) #29	APC2 (ENSAMEG00000024057) #30	RPS15 (ENSAMEG00000026624) #31	DAZAP1 (ENSAMEG00000003364) #32	GAMT (ENSAMEG00000003350) #33	NDUFS7 (ENSAMEG00000003326) #34	PWWP3A (ENSAMEG00000003299) #35	CIRBP (ENSAMEG00000003278)	MIDN (ENSAMEG00000029090)	ATP5F1D (ENSAMEG00000003263)
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463.n #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Equus	ANCESTRAL SPECIES	34	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00950000185823	ENSGT00940000158590 #19	ENSGT00940000160463.n #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00390000000475 #31	ENSGT00940000156757 #32	ENSGT00390000018061 #33	ENSGT00390000006565 #34	ENSGT00390000001700.a.a #35	ENSGT00940000160040.B #36
Horse	MODERN SPECIES	28	ENSECAG00000054366	DOT1L (ENSECAG00000013711) #7	AP3D1 (ENSECAG00000014724) #8	IZUMO4 (ENSECAG00000009516) #10	MOB3A (ENSECAG00000007444) #11	MKNK2 (ENSECAG00000025008) #12	BTBD2 (ENSECAG00000020996) #13	CSNK1G2 (ENSECAG00000014371) #14	SCAMP4 (ENSECAG00000008326) #15	ADAT3 (ENSECAG00000054522)	ABHD17A (ENSECAG00000038761) #17	KLF16 (ENSECAG00000034102) #18	REXO1 (ENSECAG00000012976) #19	ATP8B3 (ENSECAG00000022680) #20	ONECUT3 (ENSECAG00000037649) #21	TCF3 (ENSECAG00000000623) #22	ENSECAG00000029020	MEX3D (ENSECAG00000030546)	ENSECAG00000045516	ENSECAG00000011955 #25	ADAMTSL5 (ENSECAG00000009642) #26	REEP6 (ENSECAG00000033446) #27	PCSK4 (ENSECAG00000036064) #28	APC2 (ENSECAG00000032416) #30	RPS15 (ENSECAG00000040878) #31	DAZAP1 (ENSECAG00000011805) #32	GAMT (ENSECAG00000009689) #33	NDUFS7 (ENSECAG00000000402) #34	PWWP3A (ENSECAG00000022936) #35	EFNA2 (ENSECAG00000036611) #36	FAM174C (ENSECAG00000039910) #37
Donkey	MODERN SPECIES	12	DOT1L (ENSEASG00005021961) #7	AP3D1 (ENSEASG00005021906) #8	IZUMO4 (ENSEASG00005021873) #10	MOB3A (ENSEASG00005021870) #11	MKNK2 (ENSEASG00005021865) #12	BTBD2 (ENSEASG00005021861) #13	CSNK1G2 (ENSEASG00005030231) #14	SCAMP4 (ENSEASG00005021857) #15	ADAT3 (ENSEASG00005023754)	ABHD17A (ENSEASG00005021853) #17	KLF16 (ENSEASG00005029124) #18	ENSEASG00005029806	ENSEASG00005035652 #19	ATP8B3 (ENSEASG00005021801) #20	ONECUT3 (ENSEASG00005037648) #21	TCF3 (ENSEASG00005023833) #22	UQCR11 (ENSEASG00005021754)	ENSEASG00005031649	MBD3 (ENSEASG00005021748) #24	MEX3D (ENSEASG00005033167)	ENSEASG00005021738 #25	ENSEASG00005021735 #26	ENSEASG00005021732 #27	PCSK4 (ENSEASG00005028118) #28	C19orf25 (ENSEASG00005033060) #29	APC2 (ENSEASG00005031862) #30	ENSEASG00005035902	ENSEASG00005034668 #31	DAZAP1 (ENSEASG00005021718) #32	GAMT (ENSEASG00005021717) #33	NDUFS7 (ENSEASG00005021708) #34
Chiroptera	ANCESTRAL SPECIES	31	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463.m.a #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30
Microchiroptera	ANCESTRAL SPECIES	30	ENSGT00390000005235	ENSGT00390000013515 #7	ENSGT00550000075067 #8	ENSGT00390000015418 #10	ENSGT01050000244898.a.a.a.a #11	ENSGT00940000154587.a.b #12	ENSGT00940000159179 #13	ENSGT00940000156470 #14	ENSGT00940000162150 #15	ENSGT00390000010706	ENSGT00940000155854 #17	ENSGT00940000163280 #18	ENSGT00940000158590 #19	ENSGT00940000160463.m.a #20	ENSGT00950000183103.d.b #21	ENSGT00940000157036 #22	ENSGT00390000018299	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321 #25	ENSGT00940000160456 #26	ENSGT00940000161493 #27	ENSGT00940000161989 #28	ENSGT00390000007991 #29	ENSGT00530000063749.c.a #30	ENSGT00940000156757 #32	ENSGT00390000000475 #31	ENSGT00940000158050	ENSGT00390000009230	ENSGT00390000017576	ENSGT00510000049027.c
Greater horseshoe bat	MODERN SPECIES	9	SF3A2 (ENSRFEG00010009670)	PLEKHJ1 (ENSRFEG00010009727)	DOT1L (ENSRFEG00010009913) #7	AP3D1 (ENSRFEG00010009987) #8	IZUMO4 (ENSRFEG00010010079) #10	MOB3A (ENSRFEG00010010154) #11	MKNK2 (ENSRFEG00010010204) #12	BTBD2 (ENSRFEG00010010280) #13	CSNK1G2 (ENSRFEG00010010373) #14	SCAMP4 (ENSRFEG00010010459) #15	ABHD17A (ENSRFEG00010010571) #17	KLF16 (ENSRFEG00010010682) #18	REXO1 (ENSRFEG00010010744) #19	ATP8B3 (ENSRFEG00010010956) #20	ONECUT3 (ENSRFEG00010011366) #21	TCF3 (ENSRFEG00010011422) #22	UQCR11 (ENSRFEG00010011530)	MBD3 (ENSRFEG00010011620) #24	MEX3D (ENSRFEG00010011693)	ENSRFEG00010011755	PLK5 (ENSRFEG00010011783) #25	ADAMTSL5 (ENSRFEG00010012057) #26	REEP6 (ENSRFEG00010012076) #27	PCSK4 (ENSRFEG00010012138) #28	C19orf25 (ENSRFEG00010012169) #29	APC2 (ENSRFEG00010012212) #30	DAZAP1 (ENSRFEG00010012277) #32	RPS15 (ENSRFEG00010012434) #31	STK11 (ENSRFEG00010012568)	CBARP (ENSRFEG00010012839)	ENSRFEG00010012895
Microbat	MODERN SPECIES	1320																TCF3 (ENSMLUG00000011221) #22	ENSMLUG00000006169	MBD3 (ENSMLUG00000016725) #24	MEX3D (ENSMLUG00000017018)	ENSMLUG00000003768 #25	ADAMTSL5 (ENSMLUG00000003755) #26	REEP6 (ENSMLUG00000003752) #27	PCSK4 (ENSMLUG00000003738) #28	C19orf25 (ENSMLUG00000003735) #29	APC2 (ENSMLUG00000003726) #30	DAZAP1 (ENSMLUG00000014975) #32	STK11 (ENSMLUG00000014986)	CBARP (ENSMLUG00000014991)	ATP5F1D (ENSMLUG00000015004)	ENSMLUG00000023248	CIRBP (ENSMLUG00000015007)
Megabat	MODERN SPECIES	2421																TCF3 (ENSPVAG00000014587) #22