Amniota	ANCESTRAL SPECIES	23	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000161905	ENSGT00940000155402.a.a	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00500000044957 #37	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.B ##29
Mammalia	ANCESTRAL SPECIES	61	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT01000000216439	ENSGT00500000044957 #37	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.B ##29	ENSGT00940000159258 #28
Theria	ANCESTRAL SPECIES	31	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613
Eutheria	ANCESTRAL SPECIES	34	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Artiodactyla	ANCESTRAL SPECIES	23	ENSGT00390000012911	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Artiodactyla_a	ANCESTRAL SPECIES	24	ENSGT00390000012911	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Artiodactyla_b	ANCESTRAL SPECIES	25	ENSGT00390000012911	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000012911	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299.db #23	ENSGT00950000183005.b.d #24	ENSGT00390000001201 #25	ENSGT00940000160384 #26	ENSGT00940000160036 #27	ENSGT00940000159258 #28	ENSGT00950000183102.A.a #29	ENSGT01030000234559.a.a.a #30	ENSGT00730000111899 #31	ENSGT00390000003420.b #32	ENSGT00940000161213 #33	ENSGT00390000005318.a #34	ENSGT00390000004282 #35	ENSGT00950000183104.B.a.a #36	ENSGT00500000044957 #37
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00390000012911	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299.db #23	ENSGT00950000183005.b.d #24	ENSGT00390000001201 #25	ENSGT00940000160384 #26	ENSGT00940000160036 #27	ENSGT00940000159258 #28	ENSGT00950000183102.A.a #29	ENSGT01030000234559.a.a.a #30	ENSGT00730000111899 #31	ENSGT00390000003420.b #32	ENSGT00940000161213 #33	ENSGT00390000005318.a #34	ENSGT00390000004282 #35	ENSGT00950000183104.B.a.a #36	ENSGT00500000044957 #37
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00390000006337 #9	ENSGT00390000012911	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299.db #23	ENSGT00950000183005.b.d #24	ENSGT00390000001201 #25	ENSGT00940000160384 #26	ENSGT00940000160036 #27	ENSGT00940000159258 #28	ENSGT00950000183102.A.a #29	ENSGT01030000234559.a.a.a #30	ENSGT00730000111899 #31	ENSGT00390000003420.b #32	ENSGT00940000161213 #33	ENSGT00390000005318.a #34	ENSGT00390000004282.d #35	ENSGT00950000183104.B.a.a #36	ENSGT00500000044957 #37
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00390000006337 #9	ENSGT00390000012911	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299.db #23	ENSGT00950000183005.b.d #24	ENSGT00390000001201 #25	ENSGT00940000160384 #26	ENSGT00940000160036 #27	ENSGT00940000159258 #28	ENSGT00950000183102.A.a #29	ENSGT01030000234559.a.a.a #30	ENSGT00730000111899 #31	ENSGT00390000003420.b #32	ENSGT00940000161213 #33	ENSGT00390000005318.a #34	ENSGT00390000004282.d #35	ENSGT00950000183104.B.a.a #36	ENSGT00500000044957 #37
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00720000108823 #8	ENSGT00390000006337 #9	ENSGT01000000221461 #10	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299.db #23	ENSGT00950000183005.b.d #24	ENSGT00390000001201 #25	ENSGT00940000160384 #26	ENSGT00940000160036 #27	ENSGT00940000159258 #28	ENSGT00950000183102.A.a #29	ENSGT01030000234559.a.a.a #30	ENSGT00730000111899 #31	ENSGT00390000003420.b #32	ENSGT00940000161213 #33	ENSGT00390000005318.a #34	ENSGT00390000004282.d #35	ENSGT00950000183104.B.a.a #36	ENSGT00500000044957 #37
Narwhal	MODERN SPECIES	298	PLEKHJ1 (ENSMMNG00015003331) #7	SF3A2 (ENSMMNG00015003365) #8	AMH (ENSMMNG00015003387) #9	ENSMMNG00015003406 #10	AP3D1 (ENSMMNG00015003439) #11	IZUMO4 (ENSMMNG00015003549) #12	MOB3A (ENSMMNG00015003604) #13	MKNK2 (ENSMMNG00015003637) #14	BTBD2 (ENSMMNG00015003741) #15	CSNK1G2 (ENSMMNG00015003886) #16	SCAMP4 (ENSMMNG00015000070) #17	ENSMMNG00015000114 #18	ENSMMNG00015000140 #19	REXO1 (ENSMMNG00015000180) #20	ENSMMNG00015000241 #21	TCF3 (ENSMMNG00015000337) #22	ENSMMNG00015000426 #23	MBD3 (ENSMMNG00015000454) #24	MRPL54 (ENSMMNG00015000490) #25	APBA3 (ENSMMNG00015000514) #26	TJP3 (ENSMMNG00015000585) #27	PIP5K1C (ENSMMNG00015000718) #28	CACTIN (ENSMMNG00015000805) #29	TBXA2R (ENSMMNG00015000841) #30	ENSMMNG00015000865 #31	GIPC3 (ENSMMNG00015000888) #32	HMG20B (ENSMMNG00015000925) #33	MFSD12 (ENSMMNG00015000990) #34	TEKTIP1 (ENSMMNG00015001041) #35	FZR1 (ENSMMNG00015001082) #36	DOHH (ENSMMNG00015001138) #37
Beluga whale	MODERN SPECIES	62	AMH (ENSDLEG00000015995) #9	ENSDLEG00000015965	ENSDLEG00000015955 #10	AP3D1 (ENSDLEG00000015906) #11	IZUMO4 (ENSDLEG00000015890) #12	MOB3A (ENSDLEG00000015881) #13	MKNK2 (ENSDLEG00000015840) #14	BTBD2 (ENSDLEG00000015821) #15	CSNK1G2 (ENSDLEG00000015733) #16	SCAMP4 (ENSDLEG00000015708) #17	ABHD17A (ENSDLEG00000015692) #18	KLF16 (ENSDLEG00000015688) #19	REXO1 (ENSDLEG00000015623) #20	ENSDLEG00000015609 #21	ONECUT3 (ENSDLEG00000015601)	TCF3 (ENSDLEG00000015541) #22	ENSDLEG00000015534 #23	MBD3 (ENSDLEG00000015523) #24	MRPL54 (ENSDLEG00000015510) #25	APBA3 (ENSDLEG00000015494) #26	TJP3 (ENSDLEG00000015460) #27	PIP5K1C (ENSDLEG00000015428) #28	CACTIN (ENSDLEG00000015406) #29	TBXA2R (ENSDLEG00000015397) #30	GIPC3 (ENSDLEG00000015384) #32	HMG20B (ENSDLEG00000015376) #33	MFSD12 (ENSDLEG00000015360) #34	ENSDLEG00000015356 #35	FZR1 (ENSDLEG00000020434) #36	DOHH (ENSDLEG00000020431) #37	ENSDLEG00000020426
Vaquita	MODERN SPECIES	14	SF3A2 (ENSPSNG00000017010) #8	AMH (ENSPSNG00000017056) #9	JSRP1 (ENSPSNG00000017139)	AP3D1 (ENSPSNG00000017249) #11	ENSPSNG00000017407 #12	MOB3A (ENSPSNG00000017473) #13	MKNK2 (ENSPSNG00000017526) #14	BTBD2 (ENSPSNG00000017611) #15	CSNK1G2 (ENSPSNG00000017726) #16	SCAMP4 (ENSPSNG00000017791) #17	ADAT3 (ENSPSNG00000017868)	ENSPSNG00000017887 #18	KLF16 (ENSPSNG00000017960) #19	REXO1 (ENSPSNG00000018002) #20	ONECUT3 (ENSPSNG00000018126)	TCF3 (ENSPSNG00000018208) #22	MBD3 (ENSPSNG00000018406) #24	MRPL54 (ENSPSNG00000018508) #25	APBA3 (ENSPSNG00000018571) #26	TJP3 (ENSPSNG00000018690) #27	PIP5K1C (ENSPSNG00000019044) #28	CACTIN (ENSPSNG00000019192) #29	TBXA2R (ENSPSNG00000019240) #30	ENSPSNG00000009640 #31	GIPC3 (ENSPSNG00000009792) #32	HMG20B (ENSPSNG00000009908) #33	MFSD12 (ENSPSNG00000009980) #34	TEKTIP1 (ENSPSNG00000010156) #35	FZR1 (ENSPSNG00000010251) #36	DOHH (ENSPSNG00000010352) #37	NFIC (ENSPSNG00000010514)
Dolphin	MODERN SPECIES	3261																TCF3 (ENSTTRG00000004417) #22	ENSTTRG00000004414	MBD3 (ENSTTRG00000004412) #24	MRPL54 (ENSTTRG00000004410) #25	APBA3 (ENSTTRG00000004405) #26	TJP3 (ENSTTRG00000004394) #27
Sperm whale	MODERN SPECIES	11	LMNB2 (ENSPCTG00005020173)	OAZ1 (ENSPCTG00005020113)	DOT1L (ENSPCTG00005020060)	PLEKHJ1 (ENSPCTG00005019976) #7	ENSPCTG00005019945 #8	AMH (ENSPCTG00005019873) #9	JSRP1 (ENSPCTG00005019813)	CSNK1G2 (ENSPCTG00005019775) #16	BTBD2 (ENSPCTG00005019674) #15	MOB3A (ENSPCTG00005019638) #13	ENSPCTG00005019585 #17	ADAT3 (ENSPCTG00005019576)	ABHD17A (ENSPCTG00005019527) #18	KLF16 (ENSPCTG00005019503) #19	ONECUT3 (ENSPCTG00005019483)	TCF3 (ENSPCTG00005019427) #22	ENSPCTG00005019396 #23	MBD3 (ENSPCTG00005019289) #24	MRPL54 (ENSPCTG00005019236) #25	APBA3 (ENSPCTG00005019206) #26	ENSPCTG00005019177	ENSPCTG00005019154 #17	PIP5K1C (ENSPCTG00005019009) #28	TLE2 (ENSPCTG00005018210)	TLE5 (ENSPCTG00005018020)	ENSPCTG00005017955	DOHH (ENSPCTG00005017916) #37	SMIM24 (ENSPCTG00005017813)	NFIC (ENSPCTG00005017610)	ENSPCTG00005017573	ENSPCTG00005017562
Blue whale	MODERN SPECIES	14	PLEKHJ1 (ENSBMSG00010009086) #7	SF3A2 (ENSBMSG00010009060) #8	AMH (ENSBMSG00010009045) #9	JSRP1 (ENSBMSG00010009029)	AP3D1 (ENSBMSG00010008996) #11	IZUMO4 (ENSBMSG00010008921) #12	MOB3A (ENSBMSG00010008890) #13	MKNK2 (ENSBMSG00010008792) #14	BTBD2 (ENSBMSG00010008773) #15	CSNK1G2 (ENSBMSG00010008746) #16	SCAMP4 (ENSBMSG00010008730) #17	ENSBMSG00010008713 #18	REXO1 (ENSBMSG00010008687) #20	ATP8B3 (ENSBMSG00010008534) #21	ONECUT3 (ENSBMSG00010008489)	TCF3 (ENSBMSG00010008426) #22	MBD3 (ENSBMSG00010008380) #24	MRPL54 (ENSBMSG00010008367) #25	APBA3 (ENSBMSG00010008350) #26	TJP3 (ENSBMSG00010008320) #27	PIP5K1C (ENSBMSG00010008234) #28	CACTIN (ENSBMSG00010008209) #29	TBXA2R (ENSBMSG00010008203) #30	GIPC3 (ENSBMSG00010008191) #32	HMG20B (ENSBMSG00010008175) #33	MFSD12 (ENSBMSG00010008150) #34	FZR1 (ENSBMSG00010008072) #36	DOHH (ENSBMSG00010008048) #37	ENSBMSG00010007983	NFIC (ENSBMSG00010007764)	CELF5 (ENSBMSG00010007695)
Pecora	ANCESTRAL SPECIES		ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Yarkand deer	MODERN SPECIES	32	HSPA4 (ENSCHYG00000013342)	ENSCHYG00000013195	AFF4 (ENSCHYG00000012961)	LEAP2 (ENSCHYG00000012912)	UQCRQ (ENSCHYG00000012886)	GDF9 (ENSCHYG00000012848)	SHROOM1 (ENSCHYG00000012543)	SOWAHA (ENSCHYG00000012503)	BTBD2 (ENSCHYG00000012402) #15	CSNK1G2 (ENSCHYG00000012240) #16	SCAMP4 (ENSCHYG00000012163) #17	ABHD17A (ENSCHYG00000012056) #18	ENSCHYG00000012027 #19	REXO1 (ENSCHYG00000011774) #20	ATP8B3 (ENSCHYG00000011251) #21	TCF3 (ENSCHYG00000010747) #22	MBD3 (ENSCHYG00000010565) #24	MEX3D (ENSCHYG00000010512)	ENSCHYG00000010460	ADAMTSL5 (ENSCHYG00000010336)	REEP6 (ENSCHYG00000010281)	PCSK4 (ENSCHYG00000010186)	ENSCHYG00000010126	APC2 (ENSCHYG00000009962)	ENSCHYG00000009799	DAZAP1 (ENSCHYG00000009522)	GAMT (ENSCHYG00000009404)	NDUFS7 (ENSCHYG00000009337)	PWWP3A (ENSCHYG00000009248)	EFNA2 (ENSCHYG00000009190)	FAM174C (ENSCHYG00000009148)
Percora_a	ANCESTRAL SPECIES		ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299.bb #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Siberian musk deer	MODERN SPECIES	49	ZCCHC10 (ENSMMSG00000015618)	AFF4 (ENSMMSG00000015669)	LEAP2 (ENSMMSG00000015759)	UQCRQ (ENSMMSG00000015786)	GDF9 (ENSMMSG00000015798)	SHROOM1 (ENSMMSG00000015817)	ENSMMSG00000015926 #23	BTBD2 (ENSMMSG00000015949) #15	CSNK1G2 (ENSMMSG00000015996) #16	SCAMP4 (ENSMMSG00000016040) #17	ABHD17A (ENSMMSG00000016084) #18	KLF16 (ENSMMSG00000016148) #19	REXO1 (ENSMMSG00000016192) #20	ATP8B3 (ENSMMSG00000016278) #21	ONECUT3 (ENSMMSG00000016423)	TCF3 (ENSMMSG00000016463) #22	ENSMMSG00000016694 #23	MBD3 (ENSMMSG00000016718) #24	MEX3D (ENSMMSG00000016790)	ENSMMSG00000016838	ADAMTSL5 (ENSMMSG00000016856)	REEP6 (ENSMMSG00000016902)	PCSK4 (ENSMMSG00000016961)	C19orf25 (ENSMMSG00000017161)	APC2 (ENSMMSG00000017190)	ENSMMSG00000017271	DAZAP1 (ENSMMSG00000017306)	GAMT (ENSMMSG00000017365)	NDUFS7 (ENSMMSG00000017433)	PWWP3A (ENSMMSG00000017461)	EFNA2 (ENSMMSG00000017476)
Bovidae	ANCESTRAL SPECIES		ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299.bb #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.ac	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Caprinae	ANCESTRAL SPECIES	3	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00390000018299.cb #23	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00390000010706	ENSGT00940000162150 #17	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299.bb #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.ac	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Rambouillet Sheep	MODERN SPECIES	21	ZCCHC10 (ENSOARG00020021393)	AFF4 (ENSOARG00020021183)	LEAP2 (ENSOARG00020021152)	UQCRQ (ENSOARG00020021124)	GDF9 (ENSOARG00020021050)	SHROOM1 (ENSOARG00020020980)	ENSOARG00020020953 #23	BTBD2 (ENSOARG00020020888) #15	CSNK1G2 (ENSOARG00020020862) #16	ADAT3 (ENSOARG00020020822)	SCAMP4 (ENSOARG00020020721) #17	ABHD17A (ENSOARG00020020656) #18	ENSOARG00020020598 #19	ATP8B3 (ENSOARG00020019584) #21	ONECUT3 (ENSOARG00020019503)	TCF3 (ENSOARG00020018273) #22	ENSOARG00020018193 #23	MBD3 (ENSOARG00020018029) #24	MEX3D (ENSOARG00020017996)	ADAMTSL5 (ENSOARG00020017613)	REEP6 (ENSOARG00020017523)	PCSK4 (ENSOARG00020016665)	C19orf25 (ENSOARG00020016595)	APC2 (ENSOARG00020016161)	ENSOARG00020016079	DAZAP1 (ENSOARG00020015974)	GAMT (ENSOARG00020015902)	NDUFS7 (ENSOARG00020015840)	PWWP3A (ENSOARG00020015787)	EFNA2 (ENSOARG00020015712)	FAM174C (ENSOARG00020015682)
Goat	MODERN SPECIES	26	ZCCHC10 (ENSCHIG00000021529)	AFF4 (ENSCHIG00000015153)	LEAP2 (ENSCHIG00000006437)	UQCRQ (ENSCHIG00000017488)	GDF9 (ENSCHIG00000008167)	SHROOM1 (ENSCHIG00000018420)	ENSCHIG00000023876	ENSCHIG00000010758	BTBD2 (ENSCHIG00000025498) #15	CSNK1G2 (ENSCHIG00000012053) #16	SCAMP4 (ENSCHIG00000026658) #17	ABHD17A (ENSCHIG00000017282) #18	KLF16 (ENSCHIG00000010020) #19	REXO1 (ENSCHIG00000021165) #20	ATP8B3 (ENSCHIG00000016005) #21	TCF3 (ENSCHIG00000012431) #22	UQCR11 (ENSCHIG00000008372) #23	MBD3 (ENSCHIG00000024579) #24	MEX3D (ENSCHIG00000012929)	ENSCHIG00000023770	ENSCHIG00000017961	ENSCHIG00000010385	REEP6 (ENSCHIG00000025412)	PCSK4 (ENSCHIG00000017924)	C19orf25 (ENSCHIG00000015419)	APC2 (ENSCHIG00000017061)	ENSCHIG00000023211	DAZAP1 (ENSCHIG00000024694)	GAMT (ENSCHIG00000009917)	NDUFS7 (ENSCHIG00000008587)	PWWP3A (ENSCHIG00000021735)
Bovinae	ANCESTRAL SPECIES	2	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463.r #21	ENSGT00940000160463.q #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299.bb #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.ac	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
American bison	MODERN SPECIES	3121	AFF4 (ENSBBBG00000007509)	LEAP2 (ENSBBBG00000018954)	UQCRQ (ENSBBBG00000004808)	GDF9 (ENSBBBG00000018948)	SHROOM1 (ENSBBBG00000004801)	BTBD2 (ENSBBBG00000004795) #15	CSNK1G2 (ENSBBBG00000018897) #16	SCAMP4 (ENSBBBG00000018882) #17	ADAT3 (ENSBBBG00000018851)	ABHD17A (ENSBBBG00000018838) #18	ENSBBBG00000004740 #19	ENSBBBG00000018815	ENSBBBG00000018805 #20	ENSBBBG00000009151 #21	ENSBBBG00000004709 #21	TCF3 (ENSBBBG00000004690) #22	UQCR11 (ENSBBBG00000018581) #23	MBD3 (ENSBBBG00000004588) #24	ENSBBBG00000004581	ADAMTSL5 (ENSBBBG00000004574)	REEP6 (ENSBBBG00000018528)	PCSK4 (ENSBBBG00000004562)	C19orf25 (ENSBBBG00000018509)	APC2 (ENSBBBG00000018500)	ENSBBBG00000018471	DAZAP1 (ENSBBBG00000004531)	GAMT (ENSBBBG00000018451)	NDUFS7 (ENSBBBG00000004517)	PWWP3A (ENSBBBG00000004507)	EFNA2 (ENSBBBG00000018411)	FAM174C (ENSBBBG00000008938)
Bos	ANCESTRAL SPECIES	3	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463.r #21	ENSGT00940000160463.q #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299.bb #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.ac	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Bos_b	ANCESTRAL SPECIES	2	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463.q #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299.bb #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.ac	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Cow	MODERN SPECIES	26	HSPA4 (ENSBTAG00000015683)	ZCCHC10 (ENSBTAG00000030616)	AFF4 (ENSBTAG00000009482)	LEAP2 (ENSBTAG00000018926)	UQCRQ (ENSBTAG00000009479)	GDF9 (ENSBTAG00000009478)	SHROOM1 (ENSBTAG00000014676)	BTBD2 (ENSBTAG00000016108) #15	CSNK1G2 (ENSBTAG00000016797) #16	SCAMP4 (ENSBTAG00000045762) #17	ABHD17A (ENSBTAG00000025277) #18	KLF16 (ENSBTAG00000038055) #19	REXO1 (ENSBTAG00000020232) #20	ATP8B3 (ENSBTAG00000020229) #21	ONECUT3 (ENSBTAG00000047578)	TCF3 (ENSBTAG00000008695) #22	UQCR11 (ENSBTAG00000008692) #23	MBD3 (ENSBTAG00000038409) #24	MEX3D (ENSBTAG00000040334)	ENSBTAG00000012150	ADAMTSL5 (ENSBTAG00000046263)	REEP6 (ENSBTAG00000002311)	PCSK4 (ENSBTAG00000002305)	C7H19orf25 (ENSBTAG00000051357)	APC2 (ENSBTAG00000015433)	RPS15 (ENSBTAG00000019718)	DAZAP1 (ENSBTAG00000019714)	GAMT (ENSBTAG00000004112)	NDUFS7 (ENSBTAG00000019419)	PWWP3A (ENSBTAG00000030839)	EFNA2 (ENSBTAG00000038221)
Hybrid Bos Indicus	MODERN SPECIES	26	ZCCHC10 (ENSBIXG00005009861)	AFF4 (ENSBIXG00005009834)	LEAP2 (ENSBIXG00005000606)	UQCRQ (ENSBIXG00005000603)	ENSBIXG00005009763	SHROOM1 (ENSBIXG00005009751)	BTBD2 (ENSBIXG00005006410) #15	CSNK1G2 (ENSBIXG00005009637) #16	SCAMP4 (ENSBIXG00005009612) #17	ADAT3 (ENSBIXG00005009585)	ABHD17A (ENSBIXG00005000539) #18	KLF16 (ENSBIXG00005009542) #19	REXO1 (ENSBIXG00005009514) #20	ATP8B3 (ENSBIXG00005009458) #21	ONECUT3 (ENSBIXG00005009373)	TCF3 (ENSBIXG00005009347) #22	UQCR11 (ENSBIXG00005000460) #23	MBD3 (ENSBIXG00005000445) #24	MEX3D (ENSBIXG00005009245)	ENSBIXG00005000436	ADAMTSL5 (ENSBIXG00005000429)	REEP6 (ENSBIXG00005000422)	PCSK4 (ENSBIXG00005009196)	C19orf25 (ENSBIXG00005009184)	APC2 (ENSBIXG00005009161)	RPS15 (ENSBIXG00005009132)	DAZAP1 (ENSBIXG00005009054)	GAMT (ENSBIXG00005009015)	ENSBIXG00005008985	PWWP3A (ENSBIXG00005000323)	ENSBIXG00005000319
Bos_a	ANCESTRAL SPECIES	2	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463.r #21	ENSGT00940000160463.q #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299.bb #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.ac	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Domestic yak	MODERN SPECIES	27	GDF9 (ENSBGRG00000000431)	SHROOM1 (ENSBGRG00000000396)	SOWAHA (ENSBGRG00000018725)	ENSBGRG00000018649 #15	ENSBGRG00000018562 #15	CSNK1G2 (ENSBGRG00000018491) #16	ENSBGRG00000018385 #17	ENSBGRG00000018347	ABHD17A (ENSBGRG00000018270) #18	ENSBGRG00000018212 #19	ENSBGRG00000018133	ENSBGRG00000017850 #20	ENSBGRG00000017775 #21	ENSBGRG00000017718 #21	ONECUT3 (ENSBGRG00000017622)	TCF3 (ENSBGRG00000017293) #22	UQCR11 (ENSBGRG00000017215) #23	MBD3 (ENSBGRG00000016990) #24	MEX3D (ENSBGRG00000016912)	ENSBGRG00000016857	ADAMTSL5 (ENSBGRG00000016801)	REEP6 (ENSBGRG00000016730)	PCSK4 (ENSBGRG00000016652)	ENSBGRG00000016616	APC2 (ENSBGRG00000016072)	RPS15 (ENSBGRG00000015856)	DAZAP1 (ENSBGRG00000015677)	GAMT (ENSBGRG00000015533)	NDUFS7 (ENSBGRG00000015309)	PWWP3A (ENSBGRG00000015207)	ENSBGRG00000015098
Wild yak	MODERN SPECIES	321				LEAP2 (ENSBMUG00000002519)	ENSBMUG00000002537	GDF9 (ENSBMUG00000002563)	SHROOM1 (ENSBMUG00000002597)	BTBD2 (ENSBMUG00000002669) #15	CSNK1G2 (ENSBMUG00000002714) #16	SCAMP4 (ENSBMUG00000002748) #17	ABHD17A (ENSBMUG00000002786) #18	ENSBMUG00000002805 #19	ENSBMUG00000002816 #20	ENSBMUG00000002836 #20	ATP8B3 (ENSBMUG00000002908) #21	TCF3 (ENSBMUG00000003152) #22	UQCR11 (ENSBMUG00000003220) #23	MBD3 (ENSBMUG00000003285) #24
Camelidae	ANCESTRAL SPECIES	36	ENSGT00390000005235 #7	ENSGT00720000108823 #8	ENSGT00390000012911	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT00940000180698	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B	ENSGT00940000153524.a
Arabian camel	MODERN SPECIES	14	JSRP1 (ENSCDRG00005010818)	ENSCDRG00005010886 #11	ENSCDRG00005010908 #11	IZUMO4 (ENSCDRG00005010985) #12	ENSCDRG00005011219	MKNK2 (ENSCDRG00005011258) #14	BTBD2 (ENSCDRG00005011331) #15	CSNK1G2 (ENSCDRG00005011384) #16	SCAMP4 (ENSCDRG00005011441) #17	ADAT3 (ENSCDRG00005011651)	ENSCDRG00005011681 #18	ENSCDRG00005011721 #19	ENSCDRG00005009175 #21	ENSCDRG00005009229 #21	ONECUT3 (ENSCDRG00005009294)	TCF3 (ENSCDRG00005009370) #22	UQCR11 (ENSCDRG00005009563) #23	MBD3 (ENSCDRG00005009596) #24	PLK5 (ENSCDRG00005010335)	ADAMTSL5 (ENSCDRG00005010436)	REEP6 (ENSCDRG00005010646)	PCSK4 (ENSCDRG00005010737)	C19orf25 (ENSCDRG00005011088)	APC2 (ENSCDRG00005011138)	ENSCDRG00005011488	ENSCDRG00005011748	GAMT (ENSCDRG00005011779)	NDUFS7 (ENSCDRG00005011846)	PWWP3A (ENSCDRG00005011921)	EFNA2 (ENSCDRG00005012098)	ENSCDRG00005012160
Suina	ANCESTRAL SPECIES	16	ENSGT00390000006337 #9	ENSGT00390000012911	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Chacoan peccary	MODERN SPECIES	770	SF3A2 (ENSCWAG00000016402) #8	AMH (ENSCWAG00000016349) #9	JSRP1 (ENSCWAG00000016309)	AP3D1 (ENSCWAG00000016236) #11	IZUMO4 (ENSCWAG00000015925) #12	MOB3A (ENSCWAG00000015887) #13	MKNK2 (ENSCWAG00000015852) #14	BTBD2 (ENSCWAG00000015791) #15	CSNK1G2 (ENSCWAG00000015761) #16	SCAMP4 (ENSCWAG00000015682) #17	ABHD17A (ENSCWAG00000015617) #18	KLF16 (ENSCWAG00000015558) #19	REXO1 (ENSCWAG00000015439) #20	ENSCWAG00000014928 #21	ONECUT3 (ENSCWAG00000014770)	TCF3 (ENSCWAG00000014525) #22	UQCR11 (ENSCWAG00000014466) #23	MBD3 (ENSCWAG00000014384) #24	MEX3D (ENSCWAG00000014340)	PLK5 (ENSCWAG00000014192)	ADAMTSL5 (ENSCWAG00000014096)	REEP6 (ENSCWAG00000014026)	PCSK4 (ENSCWAG00000013794)	C19orf25 (ENSCWAG00000013761)	ENSCWAG00000013722	APC2 (ENSCWAG00000013268)	RPS15 (ENSCWAG00000013141)	DAZAP1 (ENSCWAG00000013027)	GAMT (ENSCWAG00000012935)	NDUFS7 (ENSCWAG00000012869)	PWWP3A (ENSCWAG00000012809)
Pig	MODERN SPECIES	10	AMH (ENSSSCG00000035812) #9	JSRP1 (ENSSSCG00000031899)	AP3D1 (ENSSSCG00000040157) #11	IZUMO4 (ENSSSCG00000013455) #12	MOB3A (ENSSSCG00000032366) #13	MKNK2 (ENSSSCG00000013448) #14	BTBD2 (ENSSSCG00000013444) #15	CSNK1G2 (ENSSSCG00000013445) #16	SCAMP4 (ENSSSCG00000013446) #17	ADAT3 (ENSSSCG00000038810)	ABHD17A (ENSSSCG00000013442) #18	KLF16 (ENSSSCG00000024672) #19	REXO1 (ENSSSCG00000040624) #20	ATP8B3 (ENSSSCG00000013440) #21	ONECUT3 (ENSSSCG00000013439)	TCF3 (ENSSSCG00000013437) #22	UQCR11 (ENSSSCG00000013436) #23	MBD3 (ENSSSCG00000013435) #24	MEX3D (ENSSSCG00000021750)	ENSSSCG00000013434	ADAMTSL5 (ENSSSCG00000013433)	ENSSSCG00000026387	PCSK4 (ENSSSCG00000024379)	C19orf25 (ENSSSCG00000022265)	APC2 (ENSSSCG00000023329)	RPS15 (ENSSSCG00000033169)	DAZAP1 (ENSSSCG00000013427)	GAMT (ENSSSCG00000023142)	ENSSSCG00000024144	PWWP3A (ENSSSCG00000013426)	EFNA2 (ENSSSCG00000038701)
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463.n #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Carnivora	ANCESTRAL SPECIES	6	ENSGT00390000012911	ENSGT00390000006337 #9	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000160463.n #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Felidae	ANCESTRAL SPECIES	21	ENSGT00390000012911	ENSGT00390000006337 #9	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000160463.n #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Panthera	ANCESTRAL SPECIES	15	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000160463.n #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Panthera_a	ANCESTRAL SPECIES	41	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463.n #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
leopard	MODERN SPECIES	160	SF3A2 (ENSPPRG00000007798) #8	PLEKHJ1 (ENSPPRG00000007711) #7	DOT1L (ENSPPRG00000007334)	AP3D1 (ENSPPRG00000006942) #11	IZUMO4 (ENSPPRG00000005640) #12	MOB3A (ENSPPRG00000004839) #13	ENSPPRG00000004730 #14	ENSPPRG00000004193 #14	ENSPPRG00000004148 #15	SCAMP4 (ENSPPRG00000003391) #17	ABHD17A (ENSPPRG00000002596) #18	ENSPPRG00000002397 #19	REXO1 (ENSPPRG00000001819) #20	ATP8B3 (ENSPPRG00000001146) #21	ONECUT3 (ENSPPRG00000023224)	TCF3 (ENSPPRG00000023512) #22	UQCR11 (ENSPPRG00000023799) #23	MBD3 (ENSPPRG00000023894) #24	MEX3D (ENSPPRG00000024256)	PLK5 (ENSPPRG00000024463)	ADAMTSL5 (ENSPPRG00000020291)	REEP6 (ENSPPRG00000019745)	C19orf25 (ENSPPRG00000017306)	APC2 (ENSPPRG00000014741)	ENSPPRG00000013868	DAZAP1 (ENSPPRG00000012584)	GAMT (ENSPPRG00000010816)	NDUFS7 (ENSPPRG00000010776)	PWWP3A (ENSPPRG00000010398)	EFNA2 (ENSPPRG00000009178)	FAM174C (ENSPPRG00000009094)
lion	MODERN SPECIES	2	SF3A2 (ENSPLOG00000005300) #8	PLEKHJ1 (ENSPLOG00000005236) #7	DOT1L (ENSPLOG00000005203)	AP3D1 (ENSPLOG00000005164) #11	IZUMO4 (ENSPLOG00000005008) #12	MOB3A (ENSPLOG00000004961) #13	MKNK2 (ENSPLOG00000004931) #14	CSNK1G2 (ENSPLOG00000004910) #16	SCAMP4 (ENSPLOG00000004893) #17	ADAT3 (ENSPLOG00000004891)	ABHD17A (ENSPLOG00000004876) #18	ENSPLOG00000004863 #19	ENSPLOG00000004852	ENSPLOG00000004835 #20	ATP8B3 (ENSPLOG00000004775) #21	TCF3 (ENSPLOG00000004719) #22	UQCR11 (ENSPLOG00000004693) #23	MBD3 (ENSPLOG00000004686) #24	MEX3D (ENSPLOG00000004682)	PLK5 (ENSPLOG00000004671)	ADAMTSL5 (ENSPLOG00000004655)	REEP6 (ENSPLOG00000004645)	PCSK4 (ENSPLOG00000004631)	C19orf25 (ENSPLOG00000004623)	APC2 (ENSPLOG00000004610)	ENSPLOG00000004578	DAZAP1 (ENSPLOG00000004550)	GAMT (ENSPLOG00000004531)	NDUFS7 (ENSPLOG00000004518)	PWWP3A (ENSPLOG00000004495)	FAM174C (ENSPLOG00000007983)
Cat	MODERN SPECIES	1	PLEKHJ1 (ENSFCAG00000045112) #7	DOT1L (ENSFCAG00000008606)	AP3D1 (ENSFCAG00000033810) #11	IZUMO4 (ENSFCAG00000012090) #12	MOB3A (ENSFCAG00000006047) #13	MKNK2 (ENSFCAG00000012087) #14	BTBD2 (ENSFCAG00000031271) #15	CSNK1G2 (ENSFCAG00000027920) #16	SCAMP4 (ENSFCAG00000038494) #17	ABHD17A (ENSFCAG00000002443) #18	KLF16 (ENSFCAG00000046707) #19	ENSFCAG00000047008	ENSFCAG00000035720 #20	ATP8B3 (ENSFCAG00000002436) #21	ONECUT3 (ENSFCAG00000043452)	TCF3 (ENSFCAG00000023514) #22	UQCR11 (ENSFCAG00000002620) #23	MBD3 (ENSFCAG00000000763) #24	MEX3D (ENSFCAG00000043755)	ENSFCAG00000001784	ADAMTSL5 (ENSFCAG00000001783)	REEP6 (ENSFCAG00000023492)	PCSK4 (ENSFCAG00000042231)	CA2H19orf25 (ENSFCAG00000001782)	APC2 (ENSFCAG00000040625)	ENSFCAG00000038889	DAZAP1 (ENSFCAG00000010767)	NDUFS7 (ENSFCAG00000032042)	GAMT (ENSFCAG00000010765)	PWWP3A (ENSFCAG00000009428)	EFNA2 (ENSFCAG00000042105)
Caniformia	ANCESTRAL SPECIES	4	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463.n #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Canidae	DUPLICATION
Canidae	ANCESTRAL SPECIES		ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463.n #21	ENSGT00950000183103.d.b	ENSGT00940000157036.a #22	ENSGT00940000160463.m.b #21	ENSGT00940000157036.b #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463.n #21	ENSGT00950000183103.d.b	ENSGT00940000157036.a #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Dingo	MODERN SPECIES	112	AMH (ENSCAFG00020018157) #9	SF3A2 (ENSCAFG00020018153) #8	PLEKHJ1 (ENSCAFG00020018140) #7	DOT1L (ENSCAFG00020017984)	AP3D1 (ENSCAFG00020017366) #11	IZUMO4 (ENSCAFG00020017320) #12	MOB3A (ENSCAFG00020017318) #13	MKNK2 (ENSCAFG00020017316) #14	BTBD2 (ENSCAFG00020017301) #15	CSNK1G2 (ENSCAFG00020017292) #16	ENSCAFG00020017287 #17	ABHD17A (ENSCAFG00020017284) #18	KLF16 (ENSCAFG00020017282) #19	REXO1 (ENSCAFG00020017276) #20	ENSCAFG00020017270 #21	TCF3 (ENSCAFG00020017249) #22	UQCR11 (ENSCAFG00020017248) #23	MBD3 (ENSCAFG00020017247) #24	MEX3D (ENSCAFG00020017245)	ENSCAFG00020017233	ADAMTSL5 (ENSCAFG00020017226)	ENSCAFG00020017223	PCSK4 (ENSCAFG00020017206)	C19orf25 (ENSCAFG00020017204)	APC2 (ENSCAFG00020017201)	ENSCAFG00020017177	DAZAP1 (ENSCAFG00020017166)	GAMT (ENSCAFG00020017160)	NDUFS7 (ENSCAFG00020017154)	ENSCAFG00020017148	EFNA2 (ENSCAFG00020017145)
Dog	MODERN SPECIES	12	SF3A2 (ENSCAFG00845012454) #8	PLEKHJ1 (ENSCAFG00845012497) #7	DOT1L (ENSCAFG00845012642)	AP3D1 (ENSCAFG00845013005) #11	IZUMO4 (ENSCAFG00845013212) #12	MOB3A (ENSCAFG00845013271) #13	MKNK2 (ENSCAFG00845013328) #14	BTBD2 (ENSCAFG00845013407) #15	CSNK1G2 (ENSCAFG00845013481) #16	ENSCAFG00845013591 #17	ABHD17A (ENSCAFG00845013636) #18	ENSCAFG00845013662 #19	REXO1 (ENSCAFG00845013697) #20	ENSCAFG00845013801 #21	ONECUT3 (ENSCAFG00845013993)	TCF3 (ENSCAFG00845014070) #22	UQCR11 (ENSCAFG00845014167) #23	MBD3 (ENSCAFG00845014226) #24	MEX3D (ENSCAFG00845014280)	PLK5 (ENSCAFG00845014316)	ENSCAFG00845011859	REEP6 (ENSCAFG00845011929)	PCSK4 (ENSCAFG00845012009)	C20H19orf25 (ENSCAFG00845012299)	APC2 (ENSCAFG00845012329)	ENSCAFG00845012383	DAZAP1 (ENSCAFG00845012456)	GAMT (ENSCAFG00845012536)	NDUFS7 (ENSCAFG00845012618)	PWWP3A (ENSCAFG00845012692)	EFNA2 (ENSCAFG00845012831)
Red fox	MODERN SPECIES	488																ENSVVUG00000003022 #22
Canidae	ANCESTRAL SPECIES		ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463.n #21	ENSGT00950000183103.d.b	ENSGT00940000157036.a #22	ENSGT00940000160463.m.b #21	ENSGT00940000157036.b #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Red fox	MODERN SPECIES	163	PLEKHJ1 (ENSVVUG00000002554) #7	DOT1L (ENSVVUG00000002530)	AP3D1 (ENSVVUG00000002492) #11	IZUMO4 (ENSVVUG00000002473) #12	MOB3A (ENSVVUG00000002458) #13	MKNK2 (ENSVVUG00000002443) #14	ENSVVUG00000002430 #15	CSNK1G2 (ENSVVUG00000002295) #16	SCAMP4 (ENSVVUG00000002257) #17	ADAT3 (ENSVVUG00000002254)	ABHD17A (ENSVVUG00000002249) #18	ENSVVUG00000002241 #19	REXO1 (ENSVVUG00000001385) #20	ENSVVUG00000023553 #21	ENSVVUG00000023546 #21	ENSVVUG00000022985 #22	UQCR11 (ENSVVUG00000022949) #23	MBD3 (ENSVVUG00000022947) #24	ENSVVUG00000022924	ADAMTSL5 (ENSVVUG00000022913)	REEP6 (ENSVVUG00000022911)	PCSK4 (ENSVVUG00000022904)	ENSVVUG00000022901	APC2 (ENSVVUG00000022884)	ENSVVUG00000022875	DAZAP1 (ENSVVUG00000022865)	GAMT (ENSVVUG00000022859)	ENSVVUG00000022856	PWWP3A (ENSVVUG00000022851)	EFNA2 (ENSVVUG00000022847)	FAM174C (ENSVVUG00000022846)
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463.n #21	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493.n	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00530000064649	ENSGT00940000153524.a
Mustelinae	ANCESTRAL SPECIES	19	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463.n #21	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493.n	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000153524.a	ENSGT00510000049027.c	ENSGT00390000017576
American mink	MODERN SPECIES	175	AMH (ENSNVIG00000005195) #9	SF3A2 (ENSNVIG00000005193) #8	ENSNVIG00000005138 #7	DOT1L (ENSNVIG00000005125)	AP3D1 (ENSNVIG00000005089) #11	IZUMO4 (ENSNVIG00000005013) #12	ENSNVIG00000005005 #13	MKNK2 (ENSNVIG00000004977) #14	ENSNVIG00000004964	CSNK1G2 (ENSNVIG00000004949) #16	SCAMP4 (ENSNVIG00000004947) #17	ABHD17A (ENSNVIG00000004930) #18	ENSNVIG00000004925 #19	REXO1 (ENSNVIG00000004894) #20	ATP8B3 (ENSNVIG00000004776) #21	TCF3 (ENSNVIG00000004526) #22	UQCR11 (ENSNVIG00000004502) #23	MBD3 (ENSNVIG00000004491) #24	PLK5 (ENSNVIG00000004473)	ADAMTSL5 (ENSNVIG00000004460)	ENSNVIG00000004400	C19orf25 (ENSNVIG00000004386)	PCSK4 (ENSNVIG00000004231)	APC2 (ENSNVIG00000004214)	DAZAP1 (ENSNVIG00000004159)	GAMT (ENSNVIG00000004135)	NDUFS7 (ENSNVIG00000004129)	PWWP3A (ENSNVIG00000004076)	ENSNVIG00000004065	MIDN (ENSNVIG00000004052)	ATP5F1D (ENSNVIG00000004033)
Ferret	MODERN SPECIES	427	DOT1L (ENSMPUG00000006962)	ENSMPUG00000006983	AP3D1 (ENSMPUG00000006989) #11	IZUMO4 (ENSMPUG00000007007) #12	MOB3A (ENSMPUG00000007042) #13	MKNK2 (ENSMPUG00000007049) #14	ENSMPUG00000007157 #15	CSNK1G2 (ENSMPUG00000007278) #16	ENSMPUG00000019982	SCAMP4 (ENSMPUG00000007438) #17	ADAT3 (ENSMPUG00000019983)	ABHD17A (ENSMPUG00000007482) #18	ENSMPUG00000007504	REXO1 (ENSMPUG00000007507) #20	ATP8B3 (ENSMPUG00000007522) #21	TCF3 (ENSMPUG00000008024) #22	ENSMPUG00000019985	ENSMPUG00000008040	MBD3 (ENSMPUG00000008045) #24	ENSMPUG00000008059	ENSMPUG00000008064	ADAMTSL5 (ENSMPUG00000008077)	REEP6 (ENSMPUG00000008119)	PCSK4 (ENSMPUG00000008172)	C19orf25 (ENSMPUG00000008182)	APC2 (ENSMPUG00000008189)	DAZAP1 (ENSMPUG00000008203)	GAMT (ENSMPUG00000008211)	NDUFS7 (ENSMPUG00000008260)	PWWP3A (ENSMPUG00000008330)	ENSMPUG00000008455
Ursidae	ANCESTRAL SPECIES	20	ENSGT00960000190456	ENSGT01040000242195	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00950000185514	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00390000010706	ENSGT00940000162150 #17	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463.n #21	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493.n	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565.d	ENSGT00390000001700.a.a	ENSGT00530000064649	ENSGT00940000153524.a	ENSGT00510000049027.c
Ursus	ANCESTRAL SPECIES	16	ENSGT00390000012911	ENSGT00720000108823 #8	ENSGT00960000190456	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00950000185514	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000155854 #18	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463.n #21	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493.n	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000164065.b	ENSGT00910000148474	ENSGT00940000154389.a	ENSGT00390000000217	ENSGT00940000153259.a.b	ENSGT00940000160405.b	ENSGT00940000155238
American black bear	MODERN SPECIES	195																TCF3 (ENSUAMG00000014722) #22	UQCR11 (ENSUAMG00000014717) #23	MBD3 (ENSUAMG00000014715) #24
Polar bear	MODERN SPECIES	455	GADD45B (ENSUMAG00000006840)	ENSUMAG00000006827	ENSUMAG00000006808	SPPL2B (ENSUMAG00000006607)	LSM7 (ENSUMAG00000006556)	SF3A2 (ENSUMAG00000006547) #8	AP3D1 (ENSUMAG00000006248) #11	ENSUMAG00000006190	MOB3A (ENSUMAG00000006173) #13	MKNK2 (ENSUMAG00000006047) #14	SCAMP4 (ENSUMAG00000006028) #17	ABHD17A (ENSUMAG00000006008) #18	ENSUMAG00000005999	ENSUMAG00000005985 #20	ENSUMAG00000005937 #21	TCF3 (ENSUMAG00000005911) #22	ENSUMAG00000005903	MBD3 (ENSUMAG00000005895) #24	ENSUMAG00000005885	ENSUMAG00000005882	C19orf25 (ENSUMAG00000005875)	DAZAP1 (ENSUMAG00000005845)	GAMT (ENSUMAG00000005814)	ENSUMAG00000005808	ENSUMAG00000005803	ENSUMAG00000005800	ENSUMAG00000005798	CIRBP (ENSUMAG00000005794)	ATP5F1D (ENSUMAG00000005780)	STK11 (ENSUMAG00000005728)	SBNO2 (ENSUMAG00000005695)
Giant Panda	MODERN SPECIES	14	ENSAMEG00000030008 #10	AMH (ENSAMEG00000005474) #9	SF3A2 (ENSAMEG00000005469) #8	ENSAMEG00000031083	DOT1L (ENSAMEG00000005436)	IZUMO4 (ENSAMEG00000005317) #12	AP3D1 (ENSAMEG00000005331) #11	MKNK2 (ENSAMEG00000005272) #14	ENSAMEG00000029694 #15	CSNK1G2 (ENSAMEG00000005228) #16	ADAT3 (ENSAMEG00000005218)	ABHD17A (ENSAMEG00000005209) #18	ENSAMEG00000025986 #19	REXO1 (ENSAMEG00000005178) #20	ATP8B3 (ENSAMEG00000005122) #21	TCF3 (ENSAMEG00000003503) #22	UQCR11 (ENSAMEG00000003502) #23	MBD3 (ENSAMEG00000003491) #24	PLK5 (ENSAMEG00000026228)	ADAMTSL5 (ENSAMEG00000003454)	REEP6 (ENSAMEG00000003018)	C19orf25 (ENSAMEG00000003409)	APC2 (ENSAMEG00000024057)	RPS15 (ENSAMEG00000026624)	DAZAP1 (ENSAMEG00000003364)	GAMT (ENSAMEG00000003350)	NDUFS7 (ENSAMEG00000003326)	PWWP3A (ENSAMEG00000003299)	CIRBP (ENSAMEG00000003278)	MIDN (ENSAMEG00000029090)	ATP5F1D (ENSAMEG00000003263)
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463.n #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Equus	ANCESTRAL SPECIES	34	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463.n #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Horse	MODERN SPECIES	28	ENSECAG00000054366 #7	DOT1L (ENSECAG00000013711)	AP3D1 (ENSECAG00000014724) #11	IZUMO4 (ENSECAG00000009516) #12	MOB3A (ENSECAG00000007444) #13	MKNK2 (ENSECAG00000025008) #14	BTBD2 (ENSECAG00000020996) #15	CSNK1G2 (ENSECAG00000014371) #16	SCAMP4 (ENSECAG00000008326) #17	ADAT3 (ENSECAG00000054522)	ABHD17A (ENSECAG00000038761) #18	KLF16 (ENSECAG00000034102) #19	REXO1 (ENSECAG00000012976) #20	ATP8B3 (ENSECAG00000022680) #21	ONECUT3 (ENSECAG00000037649)	TCF3 (ENSECAG00000000623) #22	ENSECAG00000029020	MEX3D (ENSECAG00000030546)	ENSECAG00000045516	ENSECAG00000011955	ADAMTSL5 (ENSECAG00000009642)	REEP6 (ENSECAG00000033446)	PCSK4 (ENSECAG00000036064)	APC2 (ENSECAG00000032416)	RPS15 (ENSECAG00000040878)	DAZAP1 (ENSECAG00000011805)	GAMT (ENSECAG00000009689)	NDUFS7 (ENSECAG00000000402)	PWWP3A (ENSECAG00000022936)	EFNA2 (ENSECAG00000036611)	FAM174C (ENSECAG00000039910)
Donkey	MODERN SPECIES	12	DOT1L (ENSEASG00005021961)	AP3D1 (ENSEASG00005021906) #11	IZUMO4 (ENSEASG00005021873) #12	MOB3A (ENSEASG00005021870) #13	MKNK2 (ENSEASG00005021865) #14	BTBD2 (ENSEASG00005021861) #15	CSNK1G2 (ENSEASG00005030231) #16	SCAMP4 (ENSEASG00005021857) #17	ADAT3 (ENSEASG00005023754)	ABHD17A (ENSEASG00005021853) #18	KLF16 (ENSEASG00005029124) #19	ENSEASG00005029806	ENSEASG00005035652 #20	ATP8B3 (ENSEASG00005021801) #21	ONECUT3 (ENSEASG00005037648)	TCF3 (ENSEASG00005023833) #22	UQCR11 (ENSEASG00005021754) #23	ENSEASG00005031649	MBD3 (ENSEASG00005021748) #24	MEX3D (ENSEASG00005033167)	ENSEASG00005021738	ENSEASG00005021735	ENSEASG00005021732	PCSK4 (ENSEASG00005028118)	C19orf25 (ENSEASG00005033060)	APC2 (ENSEASG00005031862)	ENSEASG00005035902	ENSEASG00005034668	DAZAP1 (ENSEASG00005021718)	GAMT (ENSEASG00005021717)	NDUFS7 (ENSEASG00005021708)
Chiroptera	ANCESTRAL SPECIES	31	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463.m.a #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a
Microchiroptera	ANCESTRAL SPECIES	30	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463.m.a #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00940000156757	ENSGT00390000000475	ENSGT00940000158050	ENSGT00390000009230	ENSGT00390000017576	ENSGT00510000049027.c
Greater horseshoe bat	MODERN SPECIES	9	SF3A2 (ENSRFEG00010009670) #8	PLEKHJ1 (ENSRFEG00010009727) #7	DOT1L (ENSRFEG00010009913)	AP3D1 (ENSRFEG00010009987) #11	IZUMO4 (ENSRFEG00010010079) #12	MOB3A (ENSRFEG00010010154) #13	MKNK2 (ENSRFEG00010010204) #14	BTBD2 (ENSRFEG00010010280) #15	CSNK1G2 (ENSRFEG00010010373) #16	SCAMP4 (ENSRFEG00010010459) #17	ABHD17A (ENSRFEG00010010571) #18	KLF16 (ENSRFEG00010010682) #19	REXO1 (ENSRFEG00010010744) #20	ATP8B3 (ENSRFEG00010010956) #21	ONECUT3 (ENSRFEG00010011366)	TCF3 (ENSRFEG00010011422) #22	UQCR11 (ENSRFEG00010011530) #23	MBD3 (ENSRFEG00010011620) #24	MEX3D (ENSRFEG00010011693)	ENSRFEG00010011755	PLK5 (ENSRFEG00010011783)	ADAMTSL5 (ENSRFEG00010012057)	REEP6 (ENSRFEG00010012076)	PCSK4 (ENSRFEG00010012138)	C19orf25 (ENSRFEG00010012169)	APC2 (ENSRFEG00010012212)	DAZAP1 (ENSRFEG00010012277)	RPS15 (ENSRFEG00010012434)	STK11 (ENSRFEG00010012568)	CBARP (ENSRFEG00010012839)	ENSRFEG00010012895
Microbat	MODERN SPECIES	1320																TCF3 (ENSMLUG00000011221) #22	ENSMLUG00000006169 #23	MBD3 (ENSMLUG00000016725) #24	MEX3D (ENSMLUG00000017018)	ENSMLUG00000003768	ADAMTSL5 (ENSMLUG00000003755)	REEP6 (ENSMLUG00000003752)	PCSK4 (ENSMLUG00000003738)	C19orf25 (ENSMLUG00000003735)	APC2 (ENSMLUG00000003726)	DAZAP1 (ENSMLUG00000014975)	STK11 (ENSMLUG00000014986)	CBARP (ENSMLUG00000014991)	ATP5F1D (ENSMLUG00000015004)	ENSMLUG00000023248	CIRBP (ENSMLUG00000015007)
Megabat	MODERN SPECIES	2421																TCF3 (ENSPVAG00000014587) #22
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Primates	ANCESTRAL SPECIES	18	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Strepsirrhini	ANCESTRAL SPECIES	26	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT01030000235617	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565.e	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Lemuriformes	ANCESTRAL SPECIES	22	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT01030000235617	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565.e	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Mouse lemur	MODERN SPECIES	16	SF3A2 (ENSMICG00000015443) #8	PLEKHJ1 (ENSMICG00000015433) #7	DOT1L (ENSMICG00000015405)	AP3D1 (ENSMICG00000015375) #11	IZUMO4 (ENSMICG00000015347) #12	MOB3A (ENSMICG00000033261) #13	MKNK2 (ENSMICG00000033378) #14	BTBD2 (ENSMICG00000011570) #15	CSNK1G2 (ENSMICG00000004391) #16	SCAMP4 (ENSMICG00000047295) #17	ABHD17A (ENSMICG00000013508) #18	KLF16 (ENSMICG00000044271) #19	REXO1 (ENSMICG00000013476) #20	ATP8B3 (ENSMICG00000013417) #21	ONECUT3 (ENSMICG00000031491)	TCF3 (ENSMICG00000008921) #22	UQCR11 (ENSMICG00000047280) #23	MBD3 (ENSMICG00000000808) #24	MEX3D (ENSMICG00000036648)	ENSMICG00000034085	ADAMTSL5 (ENSMICG00000031338)	REEP6 (ENSMICG00000032194)	PCSK4 (ENSMICG00000038124)	ENSMICG00000016127	APC2 (ENSMICG00000029619)	ENSMICG00000003586	DAZAP1 (ENSMICG00000003579)	GAMT (ENSMICG00000044941)	NDUFS7 (ENSMICG00000032987)	PWWP3A (ENSMICG00000003892)	EFNA2 (ENSMICG00000027470)
Lemuriformes_a	ANCESTRAL SPECIES	17	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT01030000235617	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565.e	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Greater bamboo lemur	MODERN SPECIES	235							ENSPSMG00000009200 #16	SCAMP4 (ENSPSMG00000009192) #17	ADAT3 (ENSPSMG00000009175)	ABHD17A (ENSPSMG00000009170) #18	ENSPSMG00000009166 #19	REXO1 (ENSPSMG00000009153) #20	ENSPSMG00000009131	ENSPSMG00000009127 #21	ONECUT3 (ENSPSMG00000009114)	TCF3 (ENSPSMG00000008945) #22	UQCR11 (ENSPSMG00000008817) #23	MBD3 (ENSPSMG00000008812) #24	MEX3D (ENSPSMG00000008800)	ENSPSMG00000008787	ENSPSMG00000008744	ADAMTSL5 (ENSPSMG00000008733)	REEP6 (ENSPSMG00000008710)	PCSK4 (ENSPSMG00000008688)	ENSPSMG00000008671	APC2 (ENSPSMG00000008665)	RPS15 (ENSPSMG00000008637)	DAZAP1 (ENSPSMG00000008439)	ENSPSMG00000008216	ENSPSMG00000008197
Coquerels sifaka	MODERN SPECIES	334	JSRP1 (ENSPCOG00000022471)	AMH (ENSPCOG00000026957) #9	SF3A2 (ENSPCOG00000020295) #8	PLEKHJ1 (ENSPCOG00000025927) #7	DOT1L (ENSPCOG00000021587)	AP3D1 (ENSPCOG00000024123) #11	IZUMO4 (ENSPCOG00000024028) #12	MOB3A (ENSPCOG00000010544) #13	MKNK2 (ENSPCOG00000022360) #14	BTBD2 (ENSPCOG00000025411) #15	CSNK1G2 (ENSPCOG00000015810) #16	SCAMP4 (ENSPCOG00000018936) #17	ABHD17A (ENSPCOG00000023714) #18	REXO1 (ENSPCOG00000019892) #20	ATP8B3 (ENSPCOG00000025605) #21	TCF3 (ENSPCOG00000027425) #22	UQCR11 (ENSPCOG00000026328) #23	MBD3 (ENSPCOG00000021647) #24	MEX3D (ENSPCOG00000021111)	PLK5 (ENSPCOG00000005454)	ADAMTSL5 (ENSPCOG00000020535)	REEP6 (ENSPCOG00000000661)	PCSK4 (ENSPCOG00000024565)	ENSPCOG00000016037	APC2 (ENSPCOG00000023694)	ENSPCOG00000026500	DAZAP1 (ENSPCOG00000028522)	GAMT (ENSPCOG00000027611)	NDUFS7 (ENSPCOG00000016946)	PWWP3A (ENSPCOG00000015144)	EFNA2 (ENSPCOG00000018875)
Bushbaby	MODERN SPECIES	144	PLEKHJ1 (ENSOGAG00000016478) #7	DOT1L (ENSOGAG00000003711)	AP3D1 (ENSOGAG00000014366) #11	IZUMO4 (ENSOGAG00000014364) #12	MOB3A (ENSOGAG00000014362) #13	MKNK2 (ENSOGAG00000008046) #14	BTBD2 (ENSOGAG00000005659) #15	ENSOGAG00000013248 #16	SCAMP4 (ENSOGAG00000028724) #17	ADAT3 (ENSOGAG00000013214)	ABHD17A (ENSOGAG00000013209) #18	KLF16 (ENSOGAG00000034621) #19	REXO1 (ENSOGAG00000027475) #20	ATP8B3 (ENSOGAG00000015639) #21	ONECUT3 (ENSOGAG00000030667)	TCF3 (ENSOGAG00000003587) #22	UQCR11 (ENSOGAG00000003586) #23	MBD3 (ENSOGAG00000024563) #24	MEX3D (ENSOGAG00000032843)	ENSOGAG00000027767	ADAMTSL5 (ENSOGAG00000000237)	REEP6 (ENSOGAG00000000236)	PCSK4 (ENSOGAG00000029851)	APC2 (ENSOGAG00000031543)	ENSOGAG00000015776	DAZAP1 (ENSOGAG00000000232)	GAMT (ENSOGAG00000032687)	NDUFS7 (ENSOGAG00000034777)	PWWP3A (ENSOGAG00000003403)	EFNA2 (ENSOGAG00000003380)	CIRBP (ENSOGAG00000029550)
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Catarrhini	ANCESTRAL SPECIES		ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Rhinopithecus	ANCESTRAL SPECIES	87	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00910000146348	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Black snub-nosed monkey	MODERN SPECIES	439												ABHD17A (ENSRBIG00000025506) #18	ENSRBIG00000037970 #19	REXO1 (ENSRBIG00000002136) #20	ATP8B3 (ENSRBIG00000042350) #21	TCF3 (ENSRBIG00000029950) #22	UQCR11 (ENSRBIG00000044179) #23	MBD3 (ENSRBIG00000033012) #24	ENSRBIG00000035383	ADAMTSL5 (ENSRBIG00000034521)	REEP6 (ENSRBIG00000036585)	PCSK4 (ENSRBIG00000035920)	C19orf25 (ENSRBIG00000030704)	APC2 (ENSRBIG00000035694)	ENSRBIG00000041908	DAZAP1 (ENSRBIG00000032485)	GAMT (ENSRBIG00000033371)	NDUFS7 (ENSRBIG00000038827)	PWWP3A (ENSRBIG00000036575)	ENSRBIG00000028328	FAM174C (ENSRBIG00000042672)
Golden snub-nosed monkey	MODERN SPECIES	1817	DOT1L (ENSRROG00000045004)	AP3D1 (ENSRROG00000031773) #11	ENSRROG00000041314	IZUMO4 (ENSRROG00000042338) #12	MOB3A (ENSRROG00000039364) #13	MKNK2 (ENSRROG00000030837) #14	BTBD2 (ENSRROG00000029615) #15	ENSRROG00000045271 #16	SCAMP4 (ENSRROG00000043168) #17	ENSRROG00000036651	ABHD17A (ENSRROG00000045474) #18	ENSRROG00000044138 #19	REXO1 (ENSRROG00000022002) #20	ATP8B3 (ENSRROG00000039383) #21	ENSRROG00000031907	TCF3 (ENSRROG00000033174) #22	ENSRROG00000042612	MBD3 (ENSRROG00000043725) #24	PLK5 (ENSRROG00000016360)	ADAMTSL5 (ENSRROG00000032945)	REEP6 (ENSRROG00000032802)	PCSK4 (ENSRROG00000035340)	C19orf25 (ENSRROG00000044642)	APC2 (ENSRROG00000034571)	ENSRROG00000038546	DAZAP1 (ENSRROG00000037347)	GAMT (ENSRROG00000031478)	NDUFS7 (ENSRROG00000027740)	PWWP3A (ENSRROG00000033246)	EFNA2 (ENSRROG00000037148)	FAM174C (ENSRROG00000043456)
Cercopithecinae	DUPLICATION
Cercopithecinae	DUPLICATION
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036.c.a #22	ENSGT00910000146348	ENSGT00940000157036.d #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036.c.a #22	ENSGT00940000157036.d #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036.c.a #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Cercopithecinae_d	ANCESTRAL SPECIES	22	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036.c.a #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Sooty mangabey	MODERN SPECIES	177	ENSCATG00000010390 #7	DOT1L (ENSCATG00000038916)	ENSCATG00000043416	AP3D1 (ENSCATG00000033383) #11	IZUMO4 (ENSCATG00000037484) #12	MOB3A (ENSCATG00000009409) #13	MKNK2 (ENSCATG00000042358) #14	BTBD2 (ENSCATG00000008762) #15	CSNK1G2 (ENSCATG00000033382) #16	SCAMP4 (ENSCATG00000031098) #17	ABHD17A (ENSCATG00000002146) #18	KLF16 (ENSCATG00000037745) #19	REXO1 (ENSCATG00000030746) #20	ATP8B3 (ENSCATG00000031064) #21	ONECUT3 (ENSCATG00000041421)	ENSCATG00000012828 #22	UQCR11 (ENSCATG00000044468) #23	MBD3 (ENSCATG00000044174) #24	MEX3D (ENSCATG00000029350)	PLK5 (ENSCATG00000031596)	ADAMTSL5 (ENSCATG00000014430)	REEP6 (ENSCATG00000043506)	PCSK4 (ENSCATG00000045251)	C19orf25 (ENSCATG00000044531)	APC2 (ENSCATG00000042966)	ENSCATG00000042597	DAZAP1 (ENSCATG00000029559)	GAMT (ENSCATG00000040885)	NDUFS7 (ENSCATG00000038305)	PWWP3A (ENSCATG00000031659)	EFNA2 (ENSCATG00000034129)
Macaca	ANCESTRAL SPECIES	24	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036.d #22	ENSGT00910000146348	ENSGT00940000157036.c.a #22	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B	ENSGT00530000064649
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036.d #22	ENSGT00910000146348	ENSGT00940000157036.c.a #22	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00530000063749.c.a	ENSGT00390000007991	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B	ENSGT00530000064649
Rhesus	MODERN SPECIES	10	DOT1L (ENSMMUG00000010107)	AP3D1 (ENSMMUG00000015663) #11	IZUMO4 (ENSMMUG00000015660) #12	MOB3A (ENSMMUG00000010984) #13	MKNK2 (ENSMMUG00000011265) #14	ENSMMUG00000059725 #15	CSNK1G2 (ENSMMUG00000006620) #16	ADAT3 (ENSMMUG00000049496)	SCAMP4 (ENSMMUG00000013747) #17	ABHD17A (ENSMMUG00000016539) #18	KLF16 (ENSMMUG00000047855) #19	REXO1 (ENSMMUG00000002847) #20	ATP8B3 (ENSMMUG00000002846) #21	ONECUT3 (ENSMMUG00000058741)	ENSMMUG00000062449	TCF3 (ENSMMUG00000009017) #22	MBD3 (ENSMMUG00000009014) #24	MEX3D (ENSMMUG00000053206)	ENSMMUG00000048694	ADAMTSL5 (ENSMMUG00000003815)	REEP6 (ENSMMUG00000003060)	PCSK4 (ENSMMUG00000003056)	APC2 (ENSMMUG00000003053)	RPS15 (ENSMMUG00000061470)	GAMT (ENSMMUG00000003046)	NDUFS7 (ENSMMUG00000003045)	PWWP3A (ENSMMUG00000003043)	EFNA2 (ENSMMUG00000051284)	FAM174C (ENSMMUG00000022104)	DAZAP1 (ENSMMUG00000003047)	MIDN (ENSMMUG00000022100)
Vervet Monkey	MODERN SPECIES	25	SF3A2 (ENSCSAG00000011717) #8	PLEKHJ1 (ENSCSAG00000011738) #7	DOT1L (ENSCSAG00000011808)	AP3D1 (ENSCSAG00000011851) #11	IZUMO4 (ENSCSAG00000011863) #12	MOB3A (ENSCSAG00000011866) #13	MKNK2 (ENSCSAG00000011875) #14	BTBD2 (ENSCSAG00000011880) #15	CSNK1G2 (ENSCSAG00000011891) #16	SCAMP4 (ENSCSAG00000011900) #17	ABHD17A (ENSCSAG00000011907) #18	KLF16 (ENSCSAG00000011915) #19	REXO1 (ENSCSAG00000011926) #20	ATP8B3 (ENSCSAG00000011946) #21	ONECUT3 (ENSCSAG00000011954)	TCF3 (ENSCSAG00000011964) #22	ENSCSAG00000011969	MBD3 (ENSCSAG00000011976) #24	MEX3D (ENSCSAG00000011984)	PLK5 (ENSCSAG00000011990)	ADAMTSL5 (ENSCSAG00000012011)	ENSCSAG00000012019	PCSK4 (ENSCSAG00000012070)	C19orf25 (ENSCSAG00000012103)	APC2 (ENSCSAG00000018458)	RPS15 (ENSCSAG00000012113)	DAZAP1 (ENSCSAG00000012126)	GAMT (ENSCSAG00000012137)	NDUFS7 (ENSCSAG00000012149)	PWWP3A (ENSCSAG00000012203)	EFNA2 (ENSCSAG00000012229)
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00940000157036.c.b #22
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00940000157036.c.b #22
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00940000157036.c.b #22
Cercopithecinae_d	ANCESTRAL SPECIES																	ENSGT00940000157036.c.b #22
Drill	MODERN SPECIES	376																ENSMLEG00000029168 #22
Sooty mangabey	MODERN SPECIES	533																ENSCATG00000014725 #22
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036.c.a #22	ENSGT00910000146348	ENSGT00940000157036.d #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00550000075067 #11	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036.c.a #22	ENSGT00940000157036.d #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Macaca	ANCESTRAL SPECIES	24	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036.d #22	ENSGT00910000146348	ENSGT00940000157036.c.a #22	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a
Pig-tailed macaque	MODERN SPECIES	76	ENSMNEG00000031778 #7	DOT1L (ENSMNEG00000029107)	AP3D1 (ENSMNEG00000031993) #11	IZUMO4 (ENSMNEG00000039524) #12	MOB3A (ENSMNEG00000020359) #13	MKNK2 (ENSMNEG00000005449) #14	BTBD2 (ENSMNEG00000044787) #15	CSNK1G2 (ENSMNEG00000037071) #16	SCAMP4 (ENSMNEG00000038725) #17	ADAT3 (ENSMNEG00000014696)	ABHD17A (ENSMNEG00000018607) #18	KLF16 (ENSMNEG00000044693) #19	REXO1 (ENSMNEG00000028828) #20	ATP8B3 (ENSMNEG00000033361) #21	ONECUT3 (ENSMNEG00000032588)	TCF3 (ENSMNEG00000030490) #22	ENSMNEG00000031435	MBD3 (ENSMNEG00000034026) #24	MEX3D (ENSMNEG00000043766)	PLK5 (ENSMNEG00000032883)	ADAMTSL5 (ENSMNEG00000026449)	REEP6 (ENSMNEG00000035742)	PCSK4 (ENSMNEG00000027452)	C19orf25 (ENSMNEG00000041395)	APC2 (ENSMNEG00000032973)	ENSMNEG00000028419	DAZAP1 (ENSMNEG00000040014)	GAMT (ENSMNEG00000043692)	NDUFS7 (ENSMNEG00000038929)	PWWP3A (ENSMNEG00000018556)	EFNA2 (ENSMNEG00000039786)
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036.d #22	ENSGT00910000146348	ENSGT00940000157036.c.a #22	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00530000063749.c.a	ENSGT00390000007991	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a
Crab-eating macaque	MODERN SPECIES	10	SF3A2 (ENSMFAG00000002638) #8	PLEKHJ1 (ENSMFAG00000034618) #7	ENSMFAG00000049331	AP3D1 (ENSMFAG00000033202) #11	IZUMO4 (ENSMFAG00000044044) #12	ENSMFAG00000003334 #13	MKNK2 (ENSMFAG00000037079) #14	BTBD2 (ENSMFAG00000003638) #15	ENSMFAG00000060215	ENSMFAG00000062602	SCAMP4 (ENSMFAG00000047177) #17	ENSMFAG00000051795 #19	ENSMFAG00000000498 #20	ATP8B3 (ENSMFAG00000030115) #21	ENSMFAG00000052194	TCF3 (ENSMFAG00000032612) #22	ENSMFAG00000057699	MBD3 (ENSMFAG00000044264) #24	PLK5 (ENSMFAG00000002051)	ENSMFAG00000036443	REEP6 (ENSMFAG00000046016)	ENSMFAG00000027143	ENSMFAG00000031749	DAZAP1 (ENSMFAG00000000789)	GAMT (ENSMFAG00000041341)	ENSMFAG00000002461	PWWP3A (ENSMFAG00000039690)	EFNA2 (ENSMFAG00000036658)	FAM174C (ENSMFAG00000043438)	CIRBP (ENSMFAG00000034048)	MIDN (ENSMFAG00000043242)
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00940000157036.d #22
Cercopithecinae_d	ANCESTRAL SPECIES																	ENSGT00940000157036.d #22
Drill	MODERN SPECIES	1236	OAZ1 (ENSMLEG00000031485)	JSRP1 (ENSMLEG00000043114)	ENSMLEG00000016225 #8	PLEKHJ1 (ENSMLEG00000025106) #7	DOT1L (ENSMLEG00000039660)	AP3D1 (ENSMLEG00000029244) #11	ENSMLEG00000034447	IZUMO4 (ENSMLEG00000032686) #12	MKNK2 (ENSMLEG00000034344) #14	BTBD2 (ENSMLEG00000000820) #15	CSNK1G2 (ENSMLEG00000028648) #16	SCAMP4 (ENSMLEG00000034450) #17	ABHD17A (ENSMLEG00000042961) #18	REXO1 (ENSMLEG00000040971) #20	ATP8B3 (ENSMLEG00000030996) #21	ENSMLEG00000027602 #22	UQCR11 (ENSMLEG00000032134) #23	MBD3 (ENSMLEG00000038720) #24	ENSMLEG00000026857	ADAMTSL5 (ENSMLEG00000039148)	PCSK4 (ENSMLEG00000019265)	C19orf25 (ENSMLEG00000042233)	APC2 (ENSMLEG00000036443)	ENSMLEG00000016828	DAZAP1 (ENSMLEG00000035079)	GAMT (ENSMLEG00000036015)	NDUFS7 (ENSMLEG00000022660)	PWWP3A (ENSMLEG00000034210)	CIRBP (ENSMLEG00000038347)	MIDN (ENSMLEG00000043732)	ATP5F1D (ENSMLEG00000003687)
Hominoidea	ANCESTRAL SPECIES		ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb.t.b	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00910000148644	ENSGT00390000001700.a.a
Gibbon	MODERN SPECIES	7	PEAK3 (ENSNLEG00000002255)	OAZ1 (ENSNLEG00000002179)	JSRP1 (ENSNLEG00000002155)	ENSNLEG00000028884 #9	ENSNLEG00000033384 #8	ENSNLEG00000002134 #7	ENSNLEG00000002122	AP3D1 (ENSNLEG00000002065) #11	ENSNLEG00000031927	IZUMO4 (ENSNLEG00000002023) #12	MOB3A (ENSNLEG00000002016) #13	ENSNLEG00000002013 #14	ADAT3 (ENSNLEG00000001999)	REXO1 (ENSNLEG00000001908) #20	ENSNLEG00000001905 #21	TCF3 (ENSNLEG00000001742) #22	UQCR11 (ENSNLEG00000032464) #23	MBD3 (ENSNLEG00000001734) #24	ENSNLEG00000001719	PLK5 (ENSNLEG00000001698)	ADAMTSL5 (ENSNLEG00000001690)	ENSNLEG00000030458	ENSNLEG00000001682	ENSNLEG00000001680	APC2 (ENSNLEG00000001665)	ENSNLEG00000034934	DAZAP1 (ENSNLEG00000001563)	ENSNLEG00000028017	PWWP3A (ENSNLEG00000028938)	ENSNLEG00000001551	ENSNLEG00000036106
Hominidae	ANCESTRAL SPECIES		ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb.t.b	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00910000148644	ENSGT00390000001700.a.a
Orangutan	MODERN SPECIES	10	ENSPPYG00000009341 #7	DOT1L (ENSPPYG00000009340)	AP3D1 (ENSPPYG00000009339) #11	IZUMO4 (ENSPPYG00000009338) #12	MOB3A (ENSPPYG00000009337) #13	MKNK2 (ENSPPYG00000009336) #14	BTBD2 (ENSPPYG00000009335) #15	CSNK1G2 (ENSPPYG00000009334) #16	ENSPPYG00000009333	SCAMP4 (ENSPPYG00000009332) #17	ABHD17A (ENSPPYG00000009331) #18	ENSPPYG00000035888 #19	REXO1 (ENSPPYG00000009330) #20	ATP8B3 (ENSPPYG00000009329) #21	ONECUT3 (ENSPPYG00000040175)	TCF3 (ENSPPYG00000009327) #22	UQCR (ENSPPYG00000009326)	MBD3 (ENSPPYG00000034186) #24	MEX3D (ENSPPYG00000009324)	PLK5 (ENSPPYG00000009323)	ADAMTSL5 (ENSPPYG00000009322)	REEP6 (ENSPPYG00000009321)	PCSK4 (ENSPPYG00000009320)	C19orf25 (ENSPPYG00000030407)	APC2 (ENSPPYG00000009318)	RPS15 (ENSPPYG00000040762)	DAZAP1 (ENSPPYG00000009316)	GAMT (ENSPPYG00000009315)	NDUFS7 (ENSPPYG00000009314)	ENSPPYG00000031336	PWWP3A (ENSPPYG00000029807)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00550000075067 #11	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p.b.b #18	ENSGT00940000155854.p.b.a.a #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb.t.b	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Gorilla	MODERN SPECIES	10	DOT1L (ENSGGOG00000006592)	ENSGGOG00000037964	AP3D1 (ENSGGOG00000006580) #11	IZUMO4 (ENSGGOG00000006577) #12	MOB3A (ENSGGOG00000011201) #13	MKNK2 (ENSGGOG00000027137) #14	ENSGGOG00000007717 #15	ENSGGOG00000006155	ENSGGOG00000039429	SCAMP4 (ENSGGOG00000024198) #17	ENSGGOG00000037562 #18	ENSGGOG00000038452 #19	REXO1 (ENSGGOG00000009009) #20	ATP8B3 (ENSGGOG00000008991) #21	ENSGGOG00000008983	TCF3 (ENSGGOG00000003667) #22	ENSGGOG00000002757	ENSGGOG00000012396 #24	ENSGGOG00000001083	PLK5 (ENSGGOG00000012910)	ADAMTSL5 (ENSGGOG00000011619)	REEP6 (ENSGGOG00000007316)	ENSGGOG00000007307	ENSGGOG00000002832	APC2 (ENSGGOG00000002822)	ENSGGOG00000002818	DAZAP1 (ENSGGOG00000002814)	ENSGGOG00000002809	ENSGGOG00000002804	PWWP3A (ENSGGOG00000002798)	ENSGGOG00000002341
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00550000075067 #11	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p.b.b #18	ENSGT00940000155854.p.b.a.a #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb.u.e	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Human	MODERN SPECIES	10	PLEKHJ1 (ENSG00000104886) #7	DOT1L (ENSG00000104885)	AP3D1 (ENSG00000065000) #11	IZUMO4 (ENSG00000099840) #12	MOB3A (ENSG00000172081) #13	MKNK2 (ENSG00000099875) #14	BTBD2 (ENSG00000133243) #15	CSNK1G2 (ENSG00000133275) #16	ADAT3 (ENSG00000213638)	SCAMP4 (ENSG00000227500) #17	ABHD17A (ENSG00000129968) #18	KLF16 (ENSG00000129911) #19	REXO1 (ENSG00000079313) #20	ATP8B3 (ENSG00000130270) #21	ONECUT3 (ENSG00000205922)	TCF3 (ENSG00000071564) #22	UQCR11 (ENSG00000127540) #23	MBD3 (ENSG00000071655) #24	MEX3D (ENSG00000181588)	PLK5 (ENSG00000185988)	ADAMTSL5 (ENSG00000185761)	REEP6 (ENSG00000115255)	PCSK4 (ENSG00000115257)	C19orf25 (ENSG00000119559)	APC2 (ENSG00000115266)	RPS15 (ENSG00000115268)	DAZAP1 (ENSG00000071626)	GAMT (ENSG00000130005)	NDUFS7 (ENSG00000115286)	PWWP3A (ENSG00000160953)	EFNA2 (ENSG00000099617)
Pan	ANCESTRAL SPECIES	14	ENSGT00550000075067 #11	ENSGT00910000147114	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00910000146653	ENSGT01050000245447	ENSGT00940000162150 #17	ENSGT00940000155854.p.b.a.a #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00910000146348	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb.t.b	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Chimpanzee	MODERN SPECIES	10	AP3D1 (ENSPTRG00000010223) #11	IZUMO4 (ENSPTRG00000010222) #12	MOB3A (ENSPTRG00000010221) #13	MKNK2 (ENSPTRG00000010220) #14	BTBD2 (ENSPTRG00000010219) #15	ENSPTRG00000010217	CSNK1G2 (ENSPTRG00000010218) #16	ENSPTRG00000049845	SCAMP4 (ENSPTRG00000042465) #17	ABHD17A (ENSPTRG00000010215) #18	ENSPTRG00000049033 #19	REXO1 (ENSPTRG00000010213) #20	ATP8B3 (ENSPTRG00000047280) #21	ONECUT3 (ENSPTRG00000045423)	ENSPTRG00000050650	TCF3 (ENSPTRG00000010211) #22	ENSPTRG00000010210	MBD3 (ENSPTRG00000010209) #24	MEX3D (ENSPTRG00000010208)	PLK5 (ENSPTRG00000052226)	ADAMTSL5 (ENSPTRG00000023147)	PCSK4 (ENSPTRG00000010204)	ENSPTRG00000010203	APC2 (ENSPTRG00000051842)	ENSPTRG00000010200	DAZAP1 (ENSPTRG00000010199)	GAMT (ENSPTRG00000010198)	NDUFS7 (ENSPTRG00000010196)	PWWP3A (ENSPTRG00000010195)	EFNA2 (ENSPTRG00000029192)	FAM174C (ENSPTRG00000010194)
Bonobo	MODERN SPECIES	10	DOT1L (ENSPPAG00000033986)	AP3D1 (ENSPPAG00000037152) #11	ENSPPAG00000029806	IZUMO4 (ENSPPAG00000042151) #12	MOB3A (ENSPPAG00000040771) #13	MKNK2 (ENSPPAG00000041658) #14	ENSPPAG00000034042 #15	ENSPPAG00000026831 #16	ENSPPAG00000034367	ENSPPAG00000030727	SCAMP4 (ENSPPAG00000030995) #17	ADAT3 (ENSPPAG00000041771)	ENSPPAG00000034069 #18	REXO1 (ENSPPAG00000035735) #20	ENSPPAG00000043448 #21	TCF3 (ENSPPAG00000040276) #22	ENSPPAG00000030284	MBD3 (ENSPPAG00000031282) #24	PLK5 (ENSPPAG00000025685)	ENSPPAG00000042942	REEP6 (ENSPPAG00000030448)	PCSK4 (ENSPPAG00000034233)	ENSPPAG00000027336	ENSPPAG00000013749	ENSPPAG00000015902	DAZAP1 (ENSPPAG00000033205)	ENSPPAG00000039491	NDUFS7 (ENSPPAG00000005538)	PWWP3A (ENSPPAG00000025003)	ENSPPAG00000044080	ENSPPAG00000044065
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00720000108823.g #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067.z #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470.i #16	ENSGT00940000162150 #17	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613.b	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565.g	ENSGT00390000001700.a.a.i	ENSGT00940000160040.B
Mas night monkey	MODERN SPECIES	937	AMH (ENSANAG00000031784) #9	ENSANAG00000029477 #8	PLEKHJ1 (ENSANAG00000038348) #7	DOT1L (ENSANAG00000026868)	AP3D1 (ENSANAG00000028148) #11	IZUMO4 (ENSANAG00000030921) #12	MOB3A (ENSANAG00000038176) #13	MKNK2 (ENSANAG00000037709) #14	BTBD2 (ENSANAG00000026816) #15	CSNK1G2 (ENSANAG00000034726) #16	SCAMP4 (ENSANAG00000031779) #17	ABHD17A (ENSANAG00000028521) #18	KLF16 (ENSANAG00000030532) #19	REXO1 (ENSANAG00000036896) #20	ENSANAG00000031845 #21	TCF3 (ENSANAG00000021796) #22	UQCR11 (ENSANAG00000026019) #23	MBD3 (ENSANAG00000026084) #24	ENSANAG00000029352	ADAMTSL5 (ENSANAG00000024837)	REEP6 (ENSANAG00000028787)	PCSK4 (ENSANAG00000024353)	C19orf25 (ENSANAG00000032897)	APC2 (ENSANAG00000037775)	ENSANAG00000034317	DAZAP1 (ENSANAG00000036160)	GAMT (ENSANAG00000035363)	ENSANAG00000029757	PWWP3A (ENSANAG00000026888)	EFNA2 (ENSANAG00000022997)	FAM174C (ENSANAG00000020672)
Cebidae	ANCESTRAL SPECIES	20	ENSGT00720000108823.g #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067.z #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470.i #16	ENSGT00940000162150 #17	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613.b	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565.g	ENSGT00390000001700.a.a.j	ENSGT00390000001700.a.a.i
Cebidae_a	ANCESTRAL SPECIES	9	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067.z #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470.i #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854.p #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613.a	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565.g	ENSGT00390000001700.a.a.j	ENSGT00940000160040.B
Capuchin	MODERN SPECIES	523			AP3D1 (ENSCCAG00000029351) #11	IZUMO4 (ENSCCAG00000020629) #12	MOB3A (ENSCCAG00000033887) #13	MKNK2 (ENSCCAG00000024690) #14	BTBD2 (ENSCCAG00000034374) #15	ENSCCAG00000037256 #16	SCAMP4 (ENSCCAG00000022838) #17	ENSCCAG00000037251	ABHD17A (ENSCCAG00000015020) #18	KLF16 (ENSCCAG00000032470) #19	REXO1 (ENSCCAG00000023485) #20	ATP8B3 (ENSCCAG00000035977) #21	ONECUT3 (ENSCCAG00000021408)	TCF3 (ENSCCAG00000034519) #22	UQCR11 (ENSCCAG00000035945) #23	MBD3 (ENSCCAG00000026526) #24	MEX3D (ENSCCAG00000028942)	PLK5 (ENSCCAG00000027893)	ADAMTSL5 (ENSCCAG00000030768)	ENSCCAG00000027022	PCSK4 (ENSCCAG00000034282)	C19orf25 (ENSCCAG00000030708)	APC2 (ENSCCAG00000032921)	ENSCCAG00000037411	DAZAP1 (ENSCCAG00000023519)	GAMT (ENSCCAG00000015858)	NDUFS7 (ENSCCAG00000022281)	PWWP3A (ENSCCAG00000033218)	FAM174C (ENSCCAG00000013971)
Bolivian squirrel monkey	MODERN SPECIES	257																TCF3 (ENSSBOG00000030851) #22	UQCR11 (ENSSBOG00000032342) #23	MBD3 (ENSSBOG00000031286) #24	ADAMTSL5 (ENSSBOG00000021903)	REEP6 (ENSSBOG00000020437)	PCSK4 (ENSSBOG00000024249)	C19orf25 (ENSSBOG00000010299)	APC2 (ENSSBOG00000021621)	ENSSBOG00000024826	DAZAP1 (ENSSBOG00000021919)	GAMT (ENSSBOG00000027810)	NDUFS7 (ENSSBOG00000019157)	ENSSBOG00000021211	EFNA2 (ENSSBOG00000022012)	CIRBP (ENSSBOG00000021043)	MIDN (ENSSBOG00000029421)
Marmoset	MODERN SPECIES	14	JSRP1 (ENSCJAG00000013217)	AMH (ENSCJAG00000013212) #9	SF3A2 (ENSCJAG00000013206) #8	PLEKHJ1 (ENSCJAG00000041206) #7	DOT1L (ENSCJAG00000013182)	AP3D1 (ENSCJAG00000013091) #11	IZUMO4 (ENSCJAG00000013059) #12	MOB3A (ENSCJAG00000013051) #13	MKNK2 (ENSCJAG00000000539) #14	BTBD2 (ENSCJAG00000021486) #15	SCAMP4 (ENSCJAG00000021478) #17	ABHD17A (ENSCJAG00000036983) #18	KLF16 (ENSCJAG00000042076) #19	REXO1 (ENSCJAG00000021468) #20	ATP8B3 (ENSCJAG00000082985) #21	TCF3 (ENSCJAG00000004642) #22	UQCR11 (ENSCJAG00000075823) #23	MBD3 (ENSCJAG00000073603) #24	MEX3D (ENSCJAG00000084941)	ENSCJAG00000084898	ADAMTSL5 (ENSCJAG00000038452)	REEP6 (ENSCJAG00000005705)	C19orf25 (ENSCJAG00000038129)	APC2 (ENSCJAG00000075116)	RPS15 (ENSCJAG00000005632)	GAMT (ENSCJAG00000005596)	NDUFS7 (ENSCJAG00000005587)	PWWP3A (ENSCJAG00000005556)	EFNA2 (ENSCJAG00000086835)	FAM174C (ENSCJAG00000005541)	ENSCJAG00000005609
Euarchontoglires_A	ANCESTRAL SPECIES	24	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000162150 #17	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Glires	ANCESTRAL SPECIES	25	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000162150 #17	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Lagomorpha	ANCESTRAL SPECIES	395																ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613
Pika	MODERN SPECIES	3857																ENSOPRG00000008737 #22	UQCR11 (ENSOPRG00000008731) #23	MBD3 (ENSOPRG00000008719) #24	ENSOPRG00000008708
Rabbit	MODERN SPECIES	773														ENSOCUG00000036144	ENSOCUG00000029562	ENSOCUG00000024177 #22
Rodentia	ANCESTRAL SPECIES	17	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Sciuridae	ANCESTRAL SPECIES	23	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Marmotini	ANCESTRAL SPECIES	24	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a.e	ENSGT00940000160040.B
Marmotini_b	ANCESTRAL SPECIES	9	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a.e	ENSGT00940000160040.B
Squirrel	MODERN SPECIES	188	SF3A2 (ENSSTOG00000007495) #8	PLEKHJ1 (ENSSTOG00000026258) #7	DOT1L (ENSSTOG00000011582)	AP3D1 (ENSSTOG00000014617) #11	IZUMO4 (ENSSTOG00000027805) #12	MOB3A (ENSSTOG00000024368) #13	MKNK2 (ENSSTOG00000012438) #14	BTBD2 (ENSSTOG00000024537) #15	CSNK1G2 (ENSSTOG00000022495) #16	SCAMP4 (ENSSTOG00000028842) #17	ABHD17A (ENSSTOG00000004712) #18	ENSSTOG00000033169 #19	REXO1 (ENSSTOG00000003257) #20	ATP8B3 (ENSSTOG00000021249) #21	ONECUT3 (ENSSTOG00000027380)	TCF3 (ENSSTOG00000010293) #22	UQCR11 (ENSSTOG00000021241) #23	MBD3 (ENSSTOG00000015870) #24	MEX3D (ENSSTOG00000025299)	ENSSTOG00000028771	ADAMTSL5 (ENSSTOG00000009230)	REEP6 (ENSSTOG00000033173)	PCSK4 (ENSSTOG00000021951)	ENSSTOG00000027373	APC2 (ENSSTOG00000024833)	RPS15 (ENSSTOG00000006423)	DAZAP1 (ENSSTOG00000006401)	GAMT (ENSSTOG00000022698)	NDUFS7 (ENSSTOG00000020105)	PWWP3A (ENSSTOG00000000148)	EFNA2 (ENSSTOG00000026755)
Arctic ground squirrel	MODERN SPECIES	603																TCF3 (ENSUPAG00010013147) #22	UQCR11 (ENSUPAG00010013177) #23	MBD3 (ENSUPAG00010013180) #24	MEX3D (ENSUPAG00010013193)	ENSUPAG00010013203	ADAMTSL5 (ENSUPAG00010013226)	PCSK4 (ENSUPAG00010013254)	REEP6 (ENSUPAG00010013266)	C19orf25 (ENSUPAG00010013296)	APC2 (ENSUPAG00010013306)	RPS15 (ENSUPAG00010013359)	DAZAP1 (ENSUPAG00010013372)	NDUFS7 (ENSUPAG00010013413)	GAMT (ENSUPAG00010013430)	PWWP3A (ENSUPAG00010013442)	EFNA2 (ENSUPAG00010013457)
Eurasian red squirrel	MODERN SPECIES	7	ENSSVLG00005020712 #11	AP3D1 (ENSSVLG00005020646) #11	IZUMO4 (ENSSVLG00005020559) #12	MOB3A (ENSSVLG00005020512) #13	MKNK2 (ENSSVLG00005020381) #14	BTBD2 (ENSSVLG00005020278) #15	CSNK1G2 (ENSSVLG00005020222) #16	SCAMP4 (ENSSVLG00005020123) #17	ABHD17A (ENSSVLG00005020039) #18	KLF16 (ENSSVLG00005019996) #19	ENSSVLG00005019938	ENSSVLG00005019814 #20	ENSSVLG00005019753 #21	ENSSVLG00005019621 #21	ONECUT3 (ENSSVLG00005019576)	TCF3 (ENSSVLG00005019501) #22	UQCR11 (ENSSVLG00005019254) #23	MBD3 (ENSSVLG00005019133) #24	MEX3D (ENSSVLG00005019086)	PLK5 (ENSSVLG00005018817)	ADAMTSL5 (ENSSVLG00005018762)	REEP6 (ENSSVLG00005018721)	PCSK4 (ENSSVLG00005018300)	C19orf25 (ENSSVLG00005018258)	APC2 (ENSSVLG00005017604)	RPS15 (ENSSVLG00005017411)	DAZAP1 (ENSSVLG00005017301)	GAMT (ENSSVLG00005017199)	NDUFS7 (ENSSVLG00005016984)	ENSSVLG00005016943	EFNA2 (ENSSVLG00005016887)
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Naked mole-rat female	MODERN SPECIES	21	DOT1L (ENSHGLG00000013977)	AP3D1 (ENSHGLG00000018179) #11	IZUMO4 (ENSHGLG00000045153) #12	MOB3A (ENSHGLG00000033345) #13	ENSHGLG00000040780	MKNK2 (ENSHGLG00000045644) #14	BTBD2 (ENSHGLG00000013706) #15	ENSHGLG00000040593	CSNK1G2 (ENSHGLG00000013947) #16	SCAMP4 (ENSHGLG00000017794) #17	ABHD17A (ENSHGLG00000047885) #18	KLF16 (ENSHGLG00000032359) #19	REXO1 (ENSHGLG00000009363) #20	ATP8B3 (ENSHGLG00000012356) #21	ONECUT3 (ENSHGLG00000006096)	TCF3 (ENSHGLG00000006992) #22	UQCR11 (ENSHGLG00000042586) #23	MBD3 (ENSHGLG00000018023) #24	MEX3D (ENSHGLG00000043689)	ENSHGLG00000032262	ENSHGLG00000015198	ADAMTSL5 (ENSHGLG00000005884)	REEP6 (ENSHGLG00000008175)	PCSK4 (ENSHGLG00000047722)	C19orf25 (ENSHGLG00000010653)	APC2 (ENSHGLG00000018187)	RPS15 (ENSHGLG00000046613)	DAZAP1 (ENSHGLG00000017518)	GAMT (ENSHGLG00000017891)	NDUFS7 (ENSHGLG00000035555)	PWWP3A (ENSHGLG00000007232)
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb.ec	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Hystricomorpha_b	ANCESTRAL SPECIES	17	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb.ec	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Long-tailed chinchilla	MODERN SPECIES	202	SF3A2 (ENSCLAG00000008987) #8	PLEKHJ1 (ENSCLAG00000009663) #7	DOT1L (ENSCLAG00000014227)	AP3D1 (ENSCLAG00000011465) #11	IZUMO4 (ENSCLAG00000014821) #12	MOB3A (ENSCLAG00000014306) #13	MKNK2 (ENSCLAG00000011365) #14	BTBD2 (ENSCLAG00000011757) #15	CSNK1G2 (ENSCLAG00000013855) #16	SCAMP4 (ENSCLAG00000006742) #17	ABHD17A (ENSCLAG00000007148) #18	ENSCLAG00000007739 #19	REXO1 (ENSCLAG00000013515) #20	ATP8B3 (ENSCLAG00000010582) #21	MBD3 (ENSCLAG00000008294) #24	TCF3 (ENSCLAG00000012013) #22	UQCR11 (ENSCLAG00000015392) #23	ENSCLAG00000017344	PCSK4 (ENSCLAG00000008632)	C19orf25 (ENSCLAG00000007022)	APC2 (ENSCLAG00000009831)	ENSCLAG00000007248	DAZAP1 (ENSCLAG00000009221)	GAMT (ENSCLAG00000007529)	NDUFS7 (ENSCLAG00000006766)	PWWP3A (ENSCLAG00000007894)	EFNA2 (ENSCLAG00000010919)	FAM174C (ENSCLAG00000015738)	CIRBP (ENSCLAG00000016087)	ENSCLAG00000006930	ATP5F1D (ENSCLAG00000008150)
Degu	MODERN SPECIES	91	ENSODEG00000020086	AP3D1 (ENSODEG00000013899) #11	IZUMO4 (ENSODEG00000013972) #12	MOB3A (ENSODEG00000013513) #13	MKNK2 (ENSODEG00000013380) #14	BTBD2 (ENSODEG00000012981) #15	CSNK1G2 (ENSODEG00000012762) #16	SCAMP4 (ENSODEG00000015959) #17	ADAT3 (ENSODEG00000013157)	ABHD17A (ENSODEG00000014511) #18	ENSODEG00000013602 #19	REXO1 (ENSODEG00000013331) #20	ATP8B3 (ENSODEG00000013054) #21	ENSODEG00000014280	ENSODEG00000012942	TCF3 (ENSODEG00000014758) #22	UQCR11 (ENSODEG00000013639) #23	MBD3 (ENSODEG00000012920) #24	MEX3D (ENSODEG00000012631)	ENSODEG00000013655	ADAMTSL5 (ENSODEG00000013936)	REEP6 (ENSODEG00000014025)	PCSK4 (ENSODEG00000013088)	C19orf25 (ENSODEG00000012919)	APC2 (ENSODEG00000014479)	ENSODEG00000013650	DAZAP1 (ENSODEG00000013797)	GAMT (ENSODEG00000012437)	NDUFS7 (ENSODEG00000012622)	PWWP3A (ENSODEG00000012451)	ENSODEG00000020201
Guinea pig	MODERN SPECIES	260																TCF3 (ENSCPOG00000023586) #22	UQCR11 (ENSCPOG00000010438) #23	MBD3 (ENSCPOG00000026210) #24	ENSCPOG00000009268	ADAMTSL5 (ENSCPOG00000035531)	REEP6 (ENSCPOG00000006605)	PCSK4 (ENSCPOG00000009029)	C19orf25 (ENSCPOG00000036334)	APC2 (ENSCPOG00000021628)	ENSCPOG00000003968	DAZAP1 (ENSCPOG00000020185)	GAMT (ENSCPOG00000036361)	NDUFS7 (ENSCPOG00000036781)	PWWP3A (ENSCPOG00000034775)	EFNA2 (ENSCPOG00000019291)	FAM174C (ENSCPOG00000038035)
Rodentia_B	ANCESTRAL SPECIES	28	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Kangaroo rat	MODERN SPECIES	383	Amh (ENSDORG00000014447) #9	Sf3a2 (ENSDORG00000014445) #8	Plekhj1 (ENSDORG00000024741) #7	Dot1l (ENSDORG00000014438)	Ap3d1 (ENSDORG00000009038) #11	Izumo4 (ENSDORG00000009034) #12	Mknk2 (ENSDORG00000011101) #14	Btbd2 (ENSDORG00000012931) #15	Csnk1g2 (ENSDORG00000012930) #16	ENSDORG00000028187	Scamp4 (ENSDORG00000023142) #17	Abhd17a (ENSDORG00000016211) #18	ENSDORG00000026084 #19	Rexo1 (ENSDORG00000013381) #20	Atp8b3 (ENSDORG00000013377) #21	Tcf3 (ENSDORG00000004745) #22	Uqcr11 (ENSDORG00000004744) #23	Mbd3 (ENSDORG00000004743) #24	Plk5 (ENSDORG00000029254)	Adamtsl5 (ENSDORG00000016445)	ENSDORG00000027460	2310011J03Rik (ENSDORG00000026640)	Apc2 (ENSDORG00000029142)	ENSDORG00000029404	Dazap1 (ENSDORG00000010038)	Gamt (ENSDORG00000010036)	Ndufs7 (ENSDORG00000030112)	Pwwp3a (ENSDORG00000010033)	Efna2 (ENSDORG00000006110)	Fam174c (ENSDORG00000029721)	Cirbp (ENSDORG00000023540)
Myomorpha	ANCESTRAL SPECIES	27	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Muroidea	ANCESTRAL SPECIES	32	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Muroidea_A	ANCESTRAL SPECIES	25	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Cricetidae	ANCESTRAL SPECIES	25	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Chinese hamster chok1gshd	MODERN SPECIES	2	Plekhj1 (ENSCGRG00001024439) #7	Dot1l (ENSCGRG00001023955)	Ap3d1 (ENSCGRG00001021701) #11	Izumo4 (ENSCGRG00001016288) #12	Mob3a (ENSCGRG00001013206) #13	Mknk2 (ENSCGRG00001006935) #14	Btbd2 (ENSCGRG00001020887) #15	Csnk1g2 (ENSCGRG00001023282) #16	Scamp4 (ENSCGRG00001019580) #17	ENSCGRG00001009781	Abhd17a (ENSCGRG00001015688) #18	Klf16 (ENSCGRG00001014949) #19	Rexo1 (ENSCGRG00001020072) #20	Atp8b3 (ENSCGRG00001016607) #21	Onecut3 (ENSCGRG00001015182)	Tcf3 (ENSCGRG00001007778) #22	Uqcr11 (ENSCGRG00001000921) #23	Mbd3 (ENSCGRG00001024592) #24	Mex3d (ENSCGRG00001023775)	Plk5 (ENSCGRG00001006053)	Adamtsl5 (ENSCGRG00001002103)	ENSCGRG00001013695	Pcsk4 (ENSCGRG00001009900)	2310011J03Rik (ENSCGRG00001006969)	Apc2 (ENSCGRG00001006203)	ENSCGRG00001000902	Gamt (ENSCGRG00001024338)	Ndufs7 (ENSCGRG00001016749)	Pwwp3a (ENSCGRG00001015037)	Efna2 (ENSCGRG00001006684)	Fam174c (ENSCGRG00001002716)
Golden Hamster	MODERN SPECIES	764	ENSMAUG00000016155 #7	Dot1l (ENSMAUG00000020881)	Ap3d1 (ENSMAUG00000013821) #11	Izumo4 (ENSMAUG00000003317) #12	Mob3a (ENSMAUG00000020852) #13	Mknk2 (ENSMAUG00000010327) #14	Btbd2 (ENSMAUG00000016518) #15	Csnk1g2 (ENSMAUG00000008196) #16	Scamp4 (ENSMAUG00000010303) #17	ENSMAUG00000003412	Abhd17a (ENSMAUG00000018289) #18	Klf16 (ENSMAUG00000013135) #19	Rexo1 (ENSMAUG00000007218) #20	Atp8b3 (ENSMAUG00000007365) #21	Onecut3 (ENSMAUG00000020813)	Tcf3 (ENSMAUG00000016223) #22	Uqcr11 (ENSMAUG00000015805) #23	Mbd3 (ENSMAUG00000020118) #24	Mex3d (ENSMAUG00000014977)	Plk5 (ENSMAUG00000008809)	Adamtsl5 (ENSMAUG00000005571)	ENSMAUG00000011771	Pcsk4 (ENSMAUG00000020195)	2310011J03Rik (ENSMAUG00000016300)	Apc2 (ENSMAUG00000021769)	Rps15 (ENSMAUG00000004679)	Dazap1 (ENSMAUG00000012188)	Gamt (ENSMAUG00000002429)	Ndufs7 (ENSMAUG00000021038)	Pwwp3a (ENSMAUG00000015348)	Efna2 (ENSMAUG00000022232)
Cricetidae_B	ANCESTRAL SPECIES	27	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Northern American deer mouse	MODERN SPECIES	14	Plekhj1 (ENSPEMG00000022829) #7	Dot1l (ENSPEMG00000023341)	Ap3d1 (ENSPEMG00000010230) #11	Izumo4 (ENSPEMG00000022820) #12	Mob3a (ENSPEMG00000013596) #13	Mknk2 (ENSPEMG00000023115) #14	Btbd2 (ENSPEMG00000022495) #15	Csnk1g2 (ENSPEMG00000022269) #16	Scamp4 (ENSPEMG00000018690) #17	ENSPEMG00000012417	Abhd17a (ENSPEMG00000022512) #18	ENSPEMG00000022678 #19	ENSPEMG00000021711 #20	Atp8b3 (ENSPEMG00000022146) #21	ENSPEMG00000031308	Tcf3 (ENSPEMG00000021449) #22	ENSPEMG00000028742 #23	Mbd3 (ENSPEMG00000021768) #24	ENSPEMG00000029465	Plk5 (ENSPEMG00000022788)	Adamtsl5 (ENSPEMG00000023093)	ENSPEMG00000022173	Pcsk4 (ENSPEMG00000022618)	2310011J03Rik (ENSPEMG00000026611)	Apc2 (ENSPEMG00000028979)	ENSPEMG00000021829	Dazap1 (ENSPEMG00000022548)	Gamt (ENSPEMG00000021744)	Ndufs7 (ENSPEMG00000022966)	Pwwp3a (ENSPEMG00000023645)	Efna2 (ENSPEMG00000023699)
Prairie vole	MODERN SPECIES	349	Plekhj1 (ENSMOCG00000021610) #7	Dot1l (ENSMOCG00000019264)	Ap3d1 (ENSMOCG00000001862) #11	Izumo4 (ENSMOCG00000019193) #12	Mob3a (ENSMOCG00000013082) #13	Mknk2 (ENSMOCG00000012080) #14	Btbd2 (ENSMOCG00000000475) #15	Csnk1g2 (ENSMOCG00000012005) #16	Scamp4 (ENSMOCG00000010362) #17	ENSMOCG00000017384	Abhd17a (ENSMOCG00000017992) #18	Klf16 (ENSMOCG00000018828) #19	Rexo1 (ENSMOCG00000022026) #20	Atp8b3 (ENSMOCG00000005048) #21	Onecut3 (ENSMOCG00000007601)	Tcf3 (ENSMOCG00000014260) #22	Uqcr11 (ENSMOCG00000021141) #23	Mbd3 (ENSMOCG00000021527) #24	Mex3d (ENSMOCG00000010308)	Plk5 (ENSMOCG00000012878)	Adamtsl5 (ENSMOCG00000017103)	ENSMOCG00000019981	Pcsk4 (ENSMOCG00000006638)	2310011J03Rik (ENSMOCG00000001752)	Apc2 (ENSMOCG00000018457)	Rps15 (ENSMOCG00000019754)	Dazap1 (ENSMOCG00000016931)	Gamt (ENSMOCG00000009137)	Ndufs7 (ENSMOCG00000020025)	Pwwp3a (ENSMOCG00000016458)	Efna2 (ENSMOCG00000018128)
Murinae	ANCESTRAL SPECIES	25	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Mus	ANCESTRAL SPECIES	15	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590.n #20	ENSGT00940000158590.m #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Mus_A	ANCESTRAL SPECIES	11	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590.n #20	ENSGT00940000158590.m #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Mus_B	ANCESTRAL SPECIES	10	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590.m #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Mouse	MODERN SPECIES	1	Dot1l (ENSMUSG00000061589)	Ap3d1 (ENSMUSG00000020198) #11	Izumo4 (ENSMUSG00000055862) #12	Mob3a (ENSMUSG00000003348) #13	Mknk2 (ENSMUSG00000020190) #14	Btbd2 (ENSMUSG00000003344) #15	Csnk1g2 (ENSMUSG00000003345) #16	Gm49322 (ENSMUSG00000035370)	Adat3 (ENSMUSG00000113640)	Scamp4 (ENSMUSG00000113949) #17	Abhd17a (ENSMUSG00000003346) #18	Klf16 (ENSMUSG00000035397) #19	Rexo1 (ENSMUSG00000047417) #20	Atp8b3 (ENSMUSG00000003341) #21	Onecut3 (ENSMUSG00000045518)	Tcf3 (ENSMUSG00000020167) #22	Uqcr11 (ENSMUSG00000020163) #23	Mbd3 (ENSMUSG00000035478) #24	Mex3d (ENSMUSG00000048696)	Plk5 (ENSMUSG00000035486)	Adamtsl5 (ENSMUSG00000043822)	Reep6 (ENSMUSG00000035504)	Pcsk4 (ENSMUSG00000020131)	2310011J03Rik (ENSMUSG00000020133)	Apc2 (ENSMUSG00000020135)	Rps15 (ENSMUSG00000063457)	Dazap1 (ENSMUSG00000069565)	Gamt (ENSMUSG00000020150)	Ndufs7 (ENSMUSG00000020153)	Pwwp3a (ENSMUSG00000020156)	Efna2 (ENSMUSG00000003070)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590.m #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00940000161493	ENSGT00940000161989	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475.sb.cc	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00940000160040.B
Steppe mouse	MODERN SPECIES	2340																Tcf3 (ENSMSIG00000007567) #22	Uqcr11 (ENSMSIG00000007525) #23	Mbd3 (ENSMSIG00000007464) #24	ENSMSIG00000007457	Plk5 (ENSMSIG00000007311)	Adamtsl5 (ENSMSIG00000007286)	Reep6 (ENSMSIG00000007219)	Pcsk4 (ENSMSIG00000007185)	2310011J03Rik (ENSMSIG00000007172)	Apc2 (ENSMSIG00000007080)	ENSMSIG00000007049	Dazap1 (ENSMSIG00000007017)	Gamt (ENSMSIG00000006976)	Ndufs7 (ENSMSIG00000006928)	Pwwp3a (ENSMSIG00000006900)	Efna2 (ENSMSIG00000006880)
spretus	MODERN SPECIES	1	Dot1l (MGP_SPRETEiJ_G0016418)	Ap3d1 (MGP_SPRETEiJ_G0016417) #11	Izumo4 (MGP_SPRETEiJ_G0016416) #12	Mob3a (MGP_SPRETEiJ_G0016415) #13	Mknk2 (MGP_SPRETEiJ_G0016414) #14	Btbd2 (MGP_SPRETEiJ_G0016413) #15	Csnk1g2 (MGP_SPRETEiJ_G0016412) #16	Scamp4 (MGP_SPRETEiJ_G0016411) #17	MGP_SPRETEiJ_G0016410	Abhd17a (MGP_SPRETEiJ_G0016409) #18	Klf16 (MGP_SPRETEiJ_G0016408) #19	MGP_SPRETEiJ_G0016407 #20	Rexo1 (MGP_SPRETEiJ_G0016406) #20	Atp8b3 (MGP_SPRETEiJ_G0016405) #21	Onecut3 (MGP_SPRETEiJ_G0016404)	Tcf3 (MGP_SPRETEiJ_G0016403) #22	Uqcr11 (MGP_SPRETEiJ_G0016402) #23	Mbd3 (MGP_SPRETEiJ_G0016401) #24	Mex3d (MGP_SPRETEiJ_G0016400)	Plk5 (MGP_SPRETEiJ_G0016399)	Adamtsl5 (MGP_SPRETEiJ_G0016398)	MGP_SPRETEiJ_G0016397	Pcsk4 (MGP_SPRETEiJ_G0016396)	2310011J03Rik (MGP_SPRETEiJ_G0016395)	Apc2 (MGP_SPRETEiJ_G0016394)	Rps15 (MGP_SPRETEiJ_G0016393)	Dazap1 (MGP_SPRETEiJ_G0016392)	Gamt (MGP_SPRETEiJ_G0016391)	Ndufs7 (MGP_SPRETEiJ_G0016390)	Pwwp3a (MGP_SPRETEiJ_G0016389)	Efna2 (MGP_SPRETEiJ_G0016388)
Ryukyu mouse	MODERN SPECIES	1	Dot1l (MGP_CAROLIEiJ_G0015600)	Ap3d1 (MGP_CAROLIEiJ_G0015599) #11	Izumo4 (MGP_CAROLIEiJ_G0015598) #12	Mob3a (MGP_CAROLIEiJ_G0015597) #13	Mknk2 (MGP_CAROLIEiJ_G0015596) #14	Btbd2 (MGP_CAROLIEiJ_G0015595) #15	Csnk1g2 (MGP_CAROLIEiJ_G0015594) #16	Scamp4 (MGP_CAROLIEiJ_G0015593) #17	MGP_CAROLIEiJ_G0015592	Abhd17a (MGP_CAROLIEiJ_G0015591) #18	Klf16 (MGP_CAROLIEiJ_G0015590) #19	MGP_CAROLIEiJ_G0015589 #20	Rexo1 (MGP_CAROLIEiJ_G0015588) #20	Atp8b3 (MGP_CAROLIEiJ_G0015587) #21	Onecut3 (MGP_CAROLIEiJ_G0015586)	Tcf3 (MGP_CAROLIEiJ_G0015585) #22	Uqcr11 (MGP_CAROLIEiJ_G0015584) #23	Mbd3 (MGP_CAROLIEiJ_G0015583) #24	Mex3d (MGP_CAROLIEiJ_G0015582)	Plk5 (MGP_CAROLIEiJ_G0015581)	Adamtsl5 (MGP_CAROLIEiJ_G0015580)	MGP_CAROLIEiJ_G0015579	Pcsk4 (MGP_CAROLIEiJ_G0015578)	2310011J03Rik (MGP_CAROLIEiJ_G0015577)	Apc2 (MGP_CAROLIEiJ_G0015576)	Rps15 (MGP_CAROLIEiJ_G0015575)	Dazap1 (MGP_CAROLIEiJ_G0015574)	Gamt (MGP_CAROLIEiJ_G0015573)	Ndufs7 (MGP_CAROLIEiJ_G0015572)	Pwwp3a (MGP_CAROLIEiJ_G0015571)	Efna2 (MGP_CAROLIEiJ_G0015570)
Shrew mouse	MODERN SPECIES	22	Dot1l (MGP_PahariEiJ_G0031013)	Ap3d1 (MGP_PahariEiJ_G0031012) #11	Izumo4 (MGP_PahariEiJ_G0031011) #12	Mob3a (MGP_PahariEiJ_G0031010) #13	Mknk2 (MGP_PahariEiJ_G0031009) #14	Btbd2 (MGP_PahariEiJ_G0031008) #15	Csnk1g2 (MGP_PahariEiJ_G0031007) #16	Scamp4 (MGP_PahariEiJ_G0031006) #17	MGP_PahariEiJ_G0031005	Abhd17a (MGP_PahariEiJ_G0031004) #18	Klf16 (MGP_PahariEiJ_G0031003) #19	MGP_PahariEiJ_G0031002 #20	Rexo1 (MGP_PahariEiJ_G0031001) #20	Atp8b3 (MGP_PahariEiJ_G0031000) #21	Onecut3 (MGP_PahariEiJ_G0030999)	Tcf3 (MGP_PahariEiJ_G0030998) #22	Uqcr11 (MGP_PahariEiJ_G0030997) #23	Mbd3 (MGP_PahariEiJ_G0030996) #24	MGP_PahariEiJ_G0030995	Plk5 (MGP_PahariEiJ_G0030994)	Adamtsl5 (MGP_PahariEiJ_G0030993)	MGP_PahariEiJ_G0030992	MGP_PahariEiJ_G0030991	2310011J03Rik (MGP_PahariEiJ_G0030990)	Apc2 (MGP_PahariEiJ_G0030989)	Rps15 (MGP_PahariEiJ_G0030988)	Dazap1 (MGP_PahariEiJ_G0030987)	Gamt (MGP_PahariEiJ_G0030986)	Ndufs7 (MGP_PahariEiJ_G0030985)	Pwwp3a (MGP_PahariEiJ_G0030984)	Efna2 (MGP_PahariEiJ_G0030983)
Rat	MODERN SPECIES	17	Sf3a2 (ENSRNOG00000019349) #8	Dot1l (ENSRNOG00000032546)	Ap3d1 (ENSRNOG00000018977) #11	Izumo4 (ENSRNOG00000031950) #12	Mob3a (ENSRNOG00000018971) #13	Mknk2 (ENSRNOG00000029028) #14	Btbd2 (ENSRNOG00000018788) #15	Csnk1g2 (ENSRNOG00000018529) #16	Adat3 (ENSRNOG00000063591)	Scamp4 (ENSRNOG00000018271) #17	Abhd17a (ENSRNOG00000018212) #18	Klf16 (ENSRNOG00000033694) #19	Rexo1 (ENSRNOG00000017916) #20	Atp8b3 (ENSRNOG00000024975) #21	Onecut3 (ENSRNOG00000068848)	Tcf3 (ENSRNOG00000051499) #22	Mbd3 (ENSRNOG00000028956) #24	Mex3d (ENSRNOG00000030830)	Plk5 (ENSRNOG00000034102)	Adamtsl5 (ENSRNOG00000033787)	Reep6 (ENSRNOG00000033262)	Pcsk4 (ENSRNOG00000016405)	Apc2 (ENSRNOG00000033791)	Rps15 (ENSRNOG00000024603)	Cirbp (ENSRNOG00000031387)	Gamt (ENSRNOG00000024577)	Ndufs7 (ENSRNOG00000024568)	Pwwp3a (ENSRNOG00000024549)	Efna2 (ENSRNOG00000016203)	Midn (ENSRNOG00000015434)	Atp5f1d (ENSRNOG00000014625)
Upper Galilee mountains blind mole rat	MODERN SPECIES	975	Plekhj1 (ENSNGAG00000021814) #7	Dot1l (ENSNGAG00000022514)	Ap3d1 (ENSNGAG00000022567) #11	Izumo4 (ENSNGAG00000023033) #12	Mob3a (ENSNGAG00000003413) #13	Mknk2 (ENSNGAG00000007032) #14	Btbd2 (ENSNGAG00000009736) #15	Csnk1g2 (ENSNGAG00000014089) #16	Scamp4 (ENSNGAG00000023044) #17	ENSNGAG00000022254	Abhd17a (ENSNGAG00000022493) #18	Klf16 (ENSNGAG00000022068) #19	Rexo1 (ENSNGAG00000022034) #20	Atp8b3 (ENSNGAG00000021845) #21	Onecut3 (ENSNGAG00000022721)	Tcf3 (ENSNGAG00000008392) #22	Uqcr11 (ENSNGAG00000023282) #23	Mbd3 (ENSNGAG00000022652) #24	Mex3d (ENSNGAG00000021771)	Plk5 (ENSNGAG00000022869)	Adamtsl5 (ENSNGAG00000022185)	ENSNGAG00000023057	Pcsk4 (ENSNGAG00000004063)	2310011J03Rik (ENSNGAG00000023280)	Apc2 (ENSNGAG00000005168)	Rps15 (ENSNGAG00000023415)	Dazap1 (ENSNGAG00000003560)	Gamt (ENSNGAG00000023290)	Ndufs7 (ENSNGAG00000001514)	Pwwp3a (ENSNGAG00000022211)	Efna2 (ENSNGAG00000023274)
Lesser Egyptian jerboa	MODERN SPECIES	55	Amh (ENSJJAG00000022991) #9	Sf3a2 (ENSJJAG00000010635) #8	Plekhj1 (ENSJJAG00000024092) #7	Dot1l (ENSJJAG00000023313)	Ap3d1 (ENSJJAG00000005990) #11	Izumo4 (ENSJJAG00000001324) #12	Mob3a (ENSJJAG00000014754) #13	Mknk2 (ENSJJAG00000016386) #14	ENSJJAG00000015554 #15	Csnk1g2 (ENSJJAG00000012257) #16	Scamp4 (ENSJJAG00000024085) #17	Abhd17a (ENSJJAG00000021626) #18	Klf16 (ENSJJAG00000013835) #19	Rexo1 (ENSJJAG00000023213) #20	Atp8b3 (ENSJJAG00000016029) #21	Tcf3 (ENSJJAG00000024381) #22	Uqcr11 (ENSJJAG00000005524) #23	Mbd3 (ENSJJAG00000013343) #24	Mex3d (ENSJJAG00000024350)	Adamtsl5 (ENSJJAG00000017720)	ENSJJAG00000001649	Pcsk4 (ENSJJAG00000024344)	2310011J03Rik (ENSJJAG00000019517)	Apc2 (ENSJJAG00000011530)	Rps15 (ENSJJAG00000010009)	Dazap1 (ENSJJAG00000000715)	Gamt (ENSJJAG00000020674)	Ndufs7 (ENSJJAG00000021001)	Pwwp3a (ENSJJAG00000015661)	Efna2 (ENSJJAG00000011477)	ENSJJAG00000021928
Atlantogenata	ANCESTRAL SPECIES	75								ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000162321	ENSGT00940000160456	ENSGT00470000042565	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000018061	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00530000064649	ENSGT00940000153524.a
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000157036 #22
Armadillo	MODERN SPECIES	1180																ENSDNOG00000042880 #22
Afrotheria	ANCESTRAL SPECIES	90								ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162321	ENSGT00940000160456	ENSGT00470000042565	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00530000064649	ENSGT00940000153524.a	ENSGT00510000049027.c	ENSGT00390000017576
Tenrec	MODERN SPECIES	6045																TCF3 (ENSETEG00000015388) #22
Afrotheria_a	ANCESTRAL SPECIES	91								ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00390000010706	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.d #24	ENSGT00940000162321	ENSGT00940000160456	ENSGT00470000042565	ENSGT00390000007991	ENSGT00530000063749.c.a	ENSGT00390000000475	ENSGT00940000156757	ENSGT00390000006565	ENSGT00390000001700.a.a	ENSGT00530000064649	ENSGT00940000153524.a	ENSGT00510000049027.c	ENSGT00390000017576
Elephant	MODERN SPECIES	115															ENSLAFG00000030572 #21	TCF3 (ENSLAFG00000026277) #22	UQCR11 (ENSLAFG00000005758) #23	MBD3 (ENSLAFG00000005756) #24	ENSLAFG00000027173	ENSLAFG00000026414	ENSLAFG00000022208	C19orf25 (ENSLAFG00000027904)	APC2 (ENSLAFG00000006602)	ENSLAFG00000008738	DAZAP1 (ENSLAFG00000018103)	ENSLAFG00000028915	ENSLAFG00000032671	NDUFS7 (ENSLAFG00000027030)	PWWP3A (ENSLAFG00000013451)	FAM174C (ENSLAFG00000005697)	ENSLAFG00000032156
Hyrax	MODERN SPECIES	5865																TCF3 (ENSPCAG00000000152) #22
Marsupialia	ANCESTRAL SPECIES	25	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000155854.d #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a	ENSGT00940000158163	ENSGT00390000002913	ENSGT00410000025695.b	ENSGT00940000167763	ENSGT00940000158081	ENSGT00730000111231	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00940000162926
Marsupialia_b	ANCESTRAL SPECIES	24	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000155854.d #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a	ENSGT00940000158163	ENSGT00390000002913	ENSGT00410000025695.b	ENSGT00940000167763	ENSGT00940000158081	ENSGT00730000111231	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00940000162926
Diprotodontia	ANCESTRAL SPECIES	54											ENSGT00940000155854.d #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a	ENSGT00940000158163	ENSGT00390000002913	ENSGT00410000025695.b	ENSGT00940000167763	ENSGT00940000158081	ENSGT00730000111231	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00940000162926
Diprotodontia_a	ANCESTRAL SPECIES	53											ENSGT00940000155854.d #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a	ENSGT00940000158163	ENSGT00390000002913	ENSGT00410000025695.b	ENSGT00940000167763	ENSGT00940000158081	ENSGT00730000111231	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00940000162926
Common wonbat	MODERN SPECIES	626	PLEKHJ1 (ENSVURG00010015697) #7	DOT1L (ENSVURG00010015667)	AP3D1 (ENSVURG00010015641) #11	MOB3A (ENSVURG00010015634) #13	MKNK2 (ENSVURG00010015612) #14	BTBD2 (ENSVURG00010015605) #15	ENSVURG00010015600 #16	SCAMP4 (ENSVURG00010015592) #17	ENSVURG00010015582	ENSVURG00010015577	ABHD17A (ENSVURG00010015569) #18	KLF16 (ENSVURG00010015560) #19	REXO1 (ENSVURG00010015541) #20	ATP8B3 (ENSVURG00010015529) #21	ONECUT3 (ENSVURG00010015518)	TCF3 (ENSVURG00010015477) #22	ENSVURG00010015467 #23	ENSVURG00010015463 ##24	MEX3D (ENSVURG00010015379)	ENSVURG00010015363	MEF2B (ENSVURG00010015357)	TMEM161A (ENSVURG00010015346)	SLC25A42 (ENSVURG00010015339)	ARMC6 (ENSVURG00010015325)	SUGP2 (ENSVURG00010015311)	HOMER3 (ENSVURG00010015278)	DDX49 (ENSVURG00010015248)	COPE (ENSVURG00010015238)	CERS1 (ENSVURG00010015235)	ENSVURG00010015230	UPF1 (ENSVURG00010015221)
koala	MODERN SPECIES	133	PLEKHJ1 (ENSPCIG00000030461) #7	DOT1L (ENSPCIG00000030462)	AP3D1 (ENSPCIG00000030490) #11	MOB3A (ENSPCIG00000001533) #13	MKNK2 (ENSPCIG00000013141) #14	BTBD2 (ENSPCIG00000035693) #15	CSNK1G2 (ENSPCIG00000030508) #16	SCAMP4 (ENSPCIG00000030510) #17	ENSPCIG00000030514	ENSPCIG00000031601	ENSPCIG00000021249 #18	KLF16 (ENSPCIG00000005422) #19	REXO1 (ENSPCIG00000013942) #20	ATP8B3 (ENSPCIG00000000575) #21	ONECUT3 (ENSPCIG00000000607)	TCF3 (ENSPCIG00000000701) #22	ENSPCIG00000000759	ENSPCIG00000000769	ENSPCIG00000000783 ##24	MEX3D (ENSPCIG00000000826)	ENSPCIG00000000833	MEF2B (ENSPCIG00000000841)	TMEM161A (ENSPCIG00000000862)	SLC25A42 (ENSPCIG00000033976)	ARMC6 (ENSPCIG00000000957)	SUGP2 (ENSPCIG00000000974)	ENSPCIG00000000990	HOMER3 (ENSPCIG00000001019)	DDX49 (ENSPCIG00000001050)	COPE (ENSPCIG00000001137)	CERS1 (ENSPCIG00000006153)
Wallaby	MODERN SPECIES	8369																TCF3 (ENSMEUG00000014058) #22
Tasmanian devil	MODERN SPECIES		DOT1L (ENSSHAG00000010977)	AP3D1 (ENSSHAG00000009537) #11	ENSSHAG00000026403	MOB3A (ENSSHAG00000008911) #13	MKNK2 (ENSSHAG00000028602) #14	BTBD2 (ENSSHAG00000020860) #15	CSNK1G2 (ENSSHAG00000006727) #16	SCAMP4 (ENSSHAG00000028703) #17	ENSSHAG00000024353	ENSSHAG00000031510	ABHD17A (ENSSHAG00000025789) #18	KLF16 (ENSSHAG00000028587) #19	REXO1 (ENSSHAG00000026227) #20	ENSSHAG00000014873 #21	ONECUT3 (ENSSHAG00000031650)	TCF3 (ENSSHAG00000013735) #22	ENSSHAG00000013346 ##24	ENSSHAG00000024607	ENSSHAG00000030655	ENSSHAG00000012631	TMEM161A (ENSSHAG00000012380)	SLC25A42 (ENSSHAG00000021004)	SUGP2 (ENSSHAG00000011705)	ARMC6 (ENSSHAG00000011840)	ENSSHAG00000011270	HOMER3 (ENSSHAG00000011091)	DDX49 (ENSSHAG00000010982)	COPE (ENSSHAG00000010821)	ENSSHAG00000030192	CERS1 (ENSSHAG00000010705)	UPF1 (ENSSHAG00000010499)
Opossum	MODERN SPECIES	2	PLEKHJ1 (ENSMODG00000004671) #7	DOT1L (ENSMODG00000004662)	AP3D1 (ENSMODG00000004631) #11	MOB3A (ENSMODG00000004569) #13	MKNK2 (ENSMODG00000004561) #14	BTBD2 (ENSMODG00000004538) #15	CSNK1G2 (ENSMODG00000004527) #16	SCAMP4 (ENSMODG00000043612) #17	ENSMODG00000004462	ENSMODG00000004426	ENSMODG00000004421 #18	ENSMODG00000038677 #19	REXO1 (ENSMODG00000004395) #20	ATP8B3 (ENSMODG00000004209) #21	ONECUT3 (ENSMODG00000004149)	TCF3 (ENSMODG00000004143) #22	UQCR11 (ENSMODG00000004132) #23	ENSMODG00000004125 ##24	MEX3D (ENSMODG00000004116)	MEF2B (ENSMODG00000004105)	TMEM161A (ENSMODG00000004083)	SLC25A42 (ENSMODG00000045593)	ARMC6 (ENSMODG00000004028)	SUGP2 (ENSMODG00000003992)	ENSMODG00000043314	HOMER3 (ENSMODG00000003771)	DDX49 (ENSMODG00000003745)	COPE (ENSMODG00000003729)	CERS1 (ENSMODG00000023939)	GDF1 (ENSMODG00000049198)	UPF1 (ENSMODG00000003689)
Platypus	MODERN SPECIES	85	CLEC3A (ENSOANG00000045685)	MAF (ENSOANG00000004812)	ENSOANG00000004813	ENSOANG00000046017	ENSOANG00000050850	SCAMP4 (ENSOANG00000042246) #17	CSNK1G2 (ENSOANG00000009333) #16	BTBD2 (ENSOANG00000041316) #15	ENSOANG00000042189	ENSOANG00000039838	ABHD17A (ENSOANG00000036622) #18	ENSOANG00000042009	REXO1 (ENSOANG00000036110) #20	ENSOANG00000014921 #21	ONECUT3 (ENSOANG00000004576)	TCF3 (ENSOANG00000014335) #22	UQCR11 (ENSOANG00000003834) #23	ENSOANG00000003672 ##24	MEX3D (ENSOANG00000011764)	ENSOANG00000037185	ENSOANG00000046986	NFIC (ENSOANG00000042636)	ENSOANG00000043849	DOHH (ENSOANG00000041341) #37	FZR1 (ENSOANG00000007656) #36	ENSOANG00000015682 #35	ENSOANG00000014325 #34	HMG20B (ENSOANG00000013515) #33	TBXA2R (ENSOANG00000037569) #30	PIP5K1C (ENSOANG00000006295) #28	TJP3 (ENSOANG00000006294) #27
Sauria	ANCESTRAL SPECIES	20	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000155505.b	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000161905	ENSGT00940000155402.a.a	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00500000044957 #37	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30
Archelosauria	ANCESTRAL SPECIES	20	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000155505.b	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000161905	ENSGT00940000155402.a.a	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32
Archosauria	ANCESTRAL SPECIES	16	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000155505.b	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000161905	ENSGT00940000155402.a.a	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32
Aves	ANCESTRAL SPECIES	20	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000156165.l	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000161905	ENSGT00940000155402.a.a	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32
Neognathae	ANCESTRAL SPECIES	21	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000156165.l	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000161905	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30
Neognathae_b	ANCESTRAL SPECIES	22	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000156165.l	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000161905	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT01010000224514	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30
Passeriformes	ANCESTRAL SPECIES	27	ENSGT00720000108823.a.a #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000156165.l	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000161905	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT01010000224514	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30
Passeriformes_d	ANCESTRAL SPECIES	28	ENSGT00720000108823.a.a #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000156165.l	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000161905	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT01010000224514	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30
Passeriformes_g	ANCESTRAL SPECIES	29	ENSGT00720000108823.b #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000156165.l	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT01100000264330	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000161905	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT01010000224514	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30
Passeroidea	ANCESTRAL SPECIES	29	ENSGT00720000108823.b #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000156165.l	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT01100000264330	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000161905	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT01010000224514	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30
Zebra finch	MODERN SPECIES	21	SF3A2 (ENSTGUG00000000305) #8	PLEKHJ1 (ENSTGUG00000021961) #7	DOT1L (ENSTGUG00000000295)	AP3D1 (ENSTGUG00000000284) #11	MOB3A (ENSTGUG00000000281) #13	MKNK2 (ENSTGUG00000000278) #14	BTBD2 (ENSTGUG00000000274) #15	CSNK1G2 (ENSTGUG00000014183) #16	SCAMP4 (ENSTGUG00000027166) #17	ENSTGUG00000000264	ABHD17A (ENSTGUG00000029122) #18	REXO1 (ENSTGUG00000000250) #20	ATP8B3 (ENSTGUG00000000215) #21	ONECUT3 (ENSTGUG00000000213)	ENSTGUG00000024129	TCF3 (ENSTGUG00000000208) #22	ENSTGUG00000028830	ENSTGUG00000027738	ENSTGUG00000000202 ##24	MEX3D (ENSTGUG00000000201)	ENSTGUG00000000189	NFIC (ENSTGUG00000000182)	FZR1 (ENSTGUG00000000181) #36	DOHH (ENSTGUG00000022298) #37	ENSTGUG00000021145	ENSTGUG00000023440	MFSD12 (ENSTGUG00000000177) #34	HMG20B (ENSTGUG00000000169) #33	ENSTGUG00000000168 #32	TBXA2R (ENSTGUG00000000167) #30	ENSTGUG00000000163 ##29
Common canary	MODERN SPECIES	44	OAZ1 (ENSSCAG00000002364)	SF3A2 (ENSSCAG00000002348) #8	PLEKHJ1 (ENSSCAG00000002343) #7	DOT1L (ENSSCAG00000002326)	AP3D1 (ENSSCAG00000002302) #11	MOB3A (ENSSCAG00000002296) #13	MKNK2 (ENSSCAG00000002284) #14	BTBD2 (ENSSCAG00000002272) #15	CSNK1G2 (ENSSCAG00000002257) #16	SCAMP4 (ENSSCAG00000002247) #17	ENSSCAG00000002241	ENSSCAG00000002237	ENSSCAG00000002235	ABHD17A (ENSSCAG00000002228) #18	REXO1 (ENSSCAG00000002218) #20	TCF3 (ENSSCAG00000002157) #22	ENSSCAG00000002149	ENSSCAG00000002147 ##24	MEX3D (ENSSCAG00000002143)	UNC13A (ENSSCAG00000001566)	NFIC (ENSSCAG00000001320)	ENSSCAG00000001314	DOHH (ENSSCAG00000001308) #37	ENSSCAG00000001302	FZR1 (ENSSCAG00000001289) #36	ENSSCAG00000001281	MFSD12 (ENSSCAG00000001269) #34	HMG20B (ENSSCAG00000001244) #33	ENSSCAG00000001232 #32	TBXA2R (ENSSCAG00000001225) #30	ENSSCAG00000001185 ##29
Medium ground finch	MODERN SPECIES	144	AMH (ENSGFOG00000011380) #9	SF3A2 (ENSGFOG00000011388) #8	PLEKHJ1 (ENSGFOG00000011393) #7	DOT1L (ENSGFOG00000011399)	AP3D1 (ENSGFOG00000011448) #11	MOB3A (ENSGFOG00000011581) #13	MKNK2 (ENSGFOG00000011586) #14	BTBD2 (ENSGFOG00000011590) #15	CSNK1G2 (ENSGFOG00000011595) #16	SCAMP4 (ENSGFOG00000011599) #17	ENSGFOG00000011608	ENSGFOG00000011616	ABHD17A (ENSGFOG00000011621) #18	REXO1 (ENSGFOG00000011627) #20	ATP8B3 (ENSGFOG00000011643) #21	TCF3 (ENSGFOG00000011869) #22	ENSGFOG00000011894	ENSGFOG00000011901 ##24	ENSGFOG00000011913	NFIC (ENSGFOG00000011961)	DOHH (ENSGFOG00000011973) #37	ENSGFOG00000011976	FZR1 (ENSGFOG00000011979) #36	MFSD12 (ENSGFOG00000011989) #34	HMG20B (ENSGFOG00000011992) #33	GIPC3 (ENSGFOG00000011999) #32	TBXA2R (ENSGFOG00000012003) #30	ENSGFOG00000012009 ##29	PIP5K1C (ENSGFOG00000012030) #28	TJP3 (ENSGFOG00000012394) #27	APBA3 (ENSGFOG00000012404) #26
Flycatcher	MODERN SPECIES	20	ENSFALG00000025653 #8	ENSFALG00000013780 #7	DOT1L (ENSFALG00000013775)	AP3D1 (ENSFALG00000013760) #11	MOB3A (ENSFALG00000013754) #13	MKNK2 (ENSFALG00000013750) #14	BTBD2 (ENSFALG00000013747) #15	CSNK1G2 (ENSFALG00000013745) #16	SCAMP4 (ENSFALG00000024926) #17	ENSFALG00000013742	ENSFALG00000024952	ABHD17A (ENSFALG00000013738) #18	REXO1 (ENSFALG00000013737) #20	ATP8B3 (ENSFALG00000013734) #21	ONECUT3 (ENSFALG00000011399)	TCF3 (ENSFALG00000011409) #22	UQCR11 (ENSFALG00000011419) #23	ENSFALG00000011424 ##24	MEX3D (ENSFALG00000026265)	ENSFALG00000011460	NFIC (ENSFALG00000011533)	ENSFALG00000022936	DOHH (ENSFALG00000011564) #37	ENSFALG00000011571	FZR1 (ENSFALG00000024069) #36	ENSFALG00000011585	MFSD12 (ENSFALG00000011597) #34	HMG20B (ENSFALG00000025880) #33	ENSFALG00000023251 #32	TBXA2R (ENSFALG00000011627) #30	ENSFALG00000011629 ##29
Great tit	MODERN SPECIES	21	ENSPMJG00000010595 #11	ENSPMJG00000010588 #11	MOB3A (ENSPMJG00000010587) #13	MKNK2 (ENSPMJG00000010190) #14	BTBD2 (ENSPMJG00000010186) #15	CSNK1G2 (ENSPMJG00000010185) #16	SCAMP4 (ENSPMJG00000010183) #17	ENSPMJG00000010181	ENSPMJG00000010180	ENSPMJG00000010179	ABHD17A (ENSPMJG00000010178) #18	REXO1 (ENSPMJG00000010174) #20	ENSPMJG00000010168	ENSPMJG00000010161 #21	ONECUT3 (ENSPMJG00000010159)	TCF3 (ENSPMJG00000010156) #22	ENSPMJG00000010155	ENSPMJG00000010147 ##24	MEX3D (ENSPMJG00000010140)	ENSPMJG00000004858	NFIC (ENSPMJG00000004825)	DOHH (ENSPMJG00000004816) #37	ENSPMJG00000004812	FZR1 (ENSPMJG00000004796) #36	ENSPMJG00000004792	MFSD12 (ENSPMJG00000004783) #34	HMG20B (ENSPMJG00000004780) #33	GIPC3 (ENSPMJG00000004693) #32	TBXA2R (ENSPMJG00000004691) #30	ENSPMJG00000004684 ##29	PIP5K1C (ENSPMJG00000004656) #28
Neognathae_c	ANCESTRAL SPECIES	24	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000164939	ENSGT00940000156165.l	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000155347.b	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT01010000224514	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30
Kakapo	MODERN SPECIES	13	SF3A2 (ENSSHBG00005014304) #8	PLEKHJ1 (ENSSHBG00005014296) #7	DOT1L (ENSSHBG00005014169)	AP3D1 (ENSSHBG00005013969) #11	MOB3A (ENSSHBG00005001083) #13	MKNK2 (ENSSHBG00005001077) #14	BTBD2 (ENSSHBG00005001073) #15	CSNK1G2 (ENSSHBG00005001071) #16	SCAMP4 (ENSSHBG00005001069) #17	ENSSHBG00005001068	ABHD17A (ENSSHBG00005009093) #18	ENSSHBG00005009078	REXO1 (ENSSHBG00005009060) #20	ATP8B3 (ENSSHBG00005008890) #21	ONECUT3 (ENSSHBG00005008818)	TCF3 (ENSSHBG00005008806) #22	UQCR11 (ENSSHBG00005008754) #23	ENSSHBG00005008744 ##24	MEX3D (ENSSHBG00005008736)	GADD45B (ENSSHBG00005008726)	DIRAS1 (ENSSHBG00005008709)	SLC39A3 (ENSSHBG00005008700)	SGTA (ENSSHBG00005008687)	THOP1 (ENSSHBG00005008671)	ENSSHBG00005008663	PCSK4 (ENSSHBG00005008646)	REEP6 (ENSSHBG00005008629)	ENSSHBG00005008614	APC2 (ENSSHBG00005008593)	RPS15 (ENSSHBG00005008580)	DAZAP1 (ENSSHBG00005008570)
Golden eagle	MODERN SPECIES	3	MOB3A (ENSACCG00020016233) #13	ENSACCG00020016236	MKNK2 (ENSACCG00020016246) #14	BTBD2 (ENSACCG00020016258) #15	ENSACCG00020016262	CSNK1G2 (ENSACCG00020016271) #16	SCAMP4 (ENSACCG00020016283) #17	ENSACCG00020016296	ENSACCG00020016302	ENSACCG00020016307	ENSACCG00020016314	ABHD17A (ENSACCG00020016322) #18	REXO1 (ENSACCG00020016333) #20	ATP8B3 (ENSACCG00020016385) #21	ONECUT3 (ENSACCG00020016434)	TCF3 (ENSACCG00020011467) #22	UQCR11 (ENSACCG00020011517) #23	ENSACCG00020011539 ##24	MEX3D (ENSACCG00020011577)	ENSACCG00020011648	ENSACCG00020011705	ENSACCG00020011729	ENSACCG00020011918	NFIC (ENSACCG00020012082)	DOHH (ENSACCG00020012109) #37	ENSACCG00020012129	FZR1 (ENSACCG00020012157) #36	TEKTIP1 (ENSACCG00020012261) #35	MFSD12 (ENSACCG00020012306) #34	HMG20B (ENSACCG00020012330) #33	ENSACCG00020012353 #32
Galloanserae	ANCESTRAL SPECIES	20	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000156165.l	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000155347.b	ENSGT01030000234573.A.b.b.a	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32
Anatidae	ANCESTRAL SPECIES	65	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000156165.l	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000155347.b.a
Pink-footed goose	MODERN SPECIES	266	SF3A2 (ENSABRG00000001698) #8	PLEKHJ1 (ENSABRG00000001737) #7	DOT1L (ENSABRG00000001775)	AP3D1 (ENSABRG00000001998) #11	MOB3A (ENSABRG00000002891) #13	MKNK2 (ENSABRG00000002901) #14	BTBD2 (ENSABRG00000002927) #15	CSNK1G2 (ENSABRG00000002942) #16	SCAMP4 (ENSABRG00000002974) #17	ENSABRG00000002992	ENSABRG00000003012	ABHD17A (ENSABRG00000003029) #18	REXO1 (ENSABRG00000003050) #20	ATP8B3 (ENSABRG00000003124) #21	ONECUT3 (ENSABRG00000003327)	TCF3 (ENSABRG00000003373) #22	ENSABRG00000003529	ENSABRG00000003555 ##24	MEX3D (ENSABRG00000003575)	ENSABRG00000003602	UNC13A (ENSABRG00000004174)
Duck	MODERN SPECIES	20	OAZ1 (ENSAPLG00000021664)	ENSAPLG00000016512	SF3A2 (ENSAPLG00000030775) #8	PLEKHJ1 (ENSAPLG00000010955) #7	DOT1L (ENSAPLG00000009414)	AP3D1 (ENSAPLG00000009684) #11	BTBD2 (ENSAPLG00000010930) #15	ENSAPLG00000010987 #16	SCAMP4 (ENSAPLG00000011434) #17	ENSAPLG00000011493	ENSAPLG00000026952	ABHD17A (ENSAPLG00000011903) #18	REXO1 (ENSAPLG00000011954) #20	ATP8B3 (ENSAPLG00000012087) #21	PIP5K1C (ENSAPLG00000005085) #28	TCF3 (ENSAPLG00000001939) #22	UQCR11 (ENSAPLG00000000981) #23	ENSAPLG00000003384 ##24	FZR1 (ENSAPLG00000005845) #36	ENSAPLG00000005461 ##29	ENSAPLG00000026833	ENSAPLG00000017442	MATK (ENSAPLG00000003263)	ENSAPLG00000025013	ELAVL1 (ENSAPLG00000003139)	ENSAPLG00000002793	ENSAPLG00000027829	POLE4 (ENSAPLG00000028021)	ENSAPLG00000011711	ENSAPLG00000017048	ENSAPLG00000011387
Phasianidae	ANCESTRAL SPECIES	19	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000156165.l	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT01030000234573.A.b.b.a	ENSGT00940000154737.c	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00950000182920.b.a.a.d.d.a	ENSGT00950000182920.b.a.a.d.d.b	ENSGT00940000165355	ENSGT00940000159170	ENSGT00940000159237	ENSGT00940000160088	ENSGT00940000159261
Japanese quail	MODERN SPECIES	20	SF3A2 (ENSCJPG00005009860) #8	PLEKHJ1 (ENSCJPG00005009861) #7	DOT1L (ENSCJPG00005009863)	AP3D1 (ENSCJPG00005009864) #11	MOB3A (ENSCJPG00005010279) #13	MKNK2 (ENSCJPG00005010280) #14	BTBD2 (ENSCJPG00005010281) #15	CSNK1G2 (ENSCJPG00005010282) #16	SCAMP4 (ENSCJPG00005010283) #17	ENSCJPG00005010284	ENSCJPG00005010285	ABHD17A (ENSCJPG00005010286) #18	REXO1 (ENSCJPG00005010287) #20	ATP8B3 (ENSCJPG00005010293) #21	ONECUT3 (ENSCJPG00005010311)	TCF3 (ENSCJPG00005010314) #22	UQCR11 (ENSCJPG00005010315) #23	ENSCJPG00005010316 ##24	MEX3D (ENSCJPG00005010317)	MIER2 (ENSCJPG00005010318)	SH3GL1 (ENSCJPG00005010319)	CHAF1A (ENSCJPG00005010320)	UBXN6 (ENSCJPG00005010321)	HDGFL2 (ENSCJPG00005010322)	ENSCJPG00005010323	ENSCJPG00005010324	ENSCJPG00005010325	SEMA6B (ENSCJPG00005010326)	SIRT6 (ENSCJPG00005010328)	CREB3L3 (ENSCJPG00005010329)	MAP2K2 (ENSCJPG00005010330)
Phasianidae_b	ANCESTRAL SPECIES	20	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000156165.l	ENSGT00940000155854 #18	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT01030000234573.A.b.b.a	ENSGT00940000154737.c	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00950000182920.b.a.a.d.d.a	ENSGT00950000182920.b.a.a.d.d.b	ENSGT00940000165355	ENSGT00940000159170	ENSGT00940000159237	ENSGT00940000160088	ENSGT00940000159261
Chicken	MODERN SPECIES	20	SF3A2 (ENSGALG00010027884) #8	PLEKHJ1 (ENSGALG00010027885) #7	DOT1L (ENSGALG00010027893)	AP3D1 (ENSGALG00010027897) #11	MOB3A (ENSGALG00010027901) #13	MKNK2 (ENSGALG00010027907) #14	BTBD2 (ENSGALG00010027914) #15	CSNK1G2 (ENSGALG00010027918) #16	SCAMP4 (ENSGALG00010027920) #17	ENSGALG00010027924	ENSGALG00010027927	ABHD17A (ENSGALG00010027931) #18	REXO1 (ENSGALG00010028429) #20	ATP8B3 (ENSGALG00010028435) #21	ONECUT3 (ENSGALG00010028441)	TCF3 (ENSGALG00010027700) #22	UQCR11 (ENSGALG00010027746) #23	MBD3 (ENSGALG00010027801) ##24	MEX3D (ENSGALG00010027811)	MIER2 (ENSGALG00010027100)	SH3GL1 (ENSGALG00010027192)	CHAF1A (ENSGALG00010027202)	UBXN6 (ENSGALG00010027208)	HDGFRP2 (ENSGALG00010027211)	PLIN4 (ENSGALG00010027214)	ENSGALG00010028734	ENSGALG00010027216	SEMA6B (ENSGALG00010027217)	ANKRD24 (ENSGALG00010027220)	SIRT6 (ENSGALG00010027223)	CREB3L3 (ENSGALG00010027225)
Turkey	MODERN SPECIES	23	ENSMGAG00000002932	CREB3L3 (ENSMGAG00000002752)	ENSMGAG00000002886	ENSMGAG00000020137	ENSMGAG00000019508	ENSMGAG00000021893	ENSMGAG00000002817	ENSMGAG00000002850	ENSMGAG00000002708	ENSMGAG00000002775	SH3GL1 (ENSMGAG00000002570)	ENSMGAG00000002532	ENSMGAG00000002325	ENSMGAG00000002493 ##24	ENSMGAG00000002489 #23	ENSMGAG00000002388 #22	ENSMGAG00000018914	ENSMGAG00000019234	USHBP1 (ENSMGAG00000019092)	ANKLE1 (ENSMGAG00000021903)	ABHD8 (ENSMGAG00000001860)	DDA1 (ENSMGAG00000003919)	ANO8 (ENSMGAG00000003374)	GTPBP3 (ENSMGAG00000020218)	ENSMGAG00000021153	YJEFN3 (ENSMGAG00000018230)	GATAD2A (ENSMGAG00000004036)	MAU2 (ENSMGAG00000004012)	SUGP1 (ENSMGAG00000003967)	TM6SF2 (ENSMGAG00000003934)	ENSMGAG00000020085
African ostrich	MODERN SPECIES	208	OAZ1 (ENSSCUG00000002805)	AMH (ENSSCUG00000002809) #9	SF3A2 (ENSSCUG00000002810) #8	PLEKHJ1 (ENSSCUG00000002811) #7	DOT1L (ENSSCUG00000002813)	AP3D1 (ENSSCUG00000002817) #11	MOB3A (ENSSCUG00000002821) #13	BTBD2 (ENSSCUG00000002823) #15	CSNK1G2 (ENSSCUG00000002824) #16	SCAMP4 (ENSSCUG00000002826) #17	ENSSCUG00000002828	ENSSCUG00000002830	ABHD17A (ENSSCUG00000002832) #18	REXO1 (ENSSCUG00000002833) #20	ATP8B3 (ENSSCUG00000002846) #21	TCF3 (ENSSCUG00000002857) #22	UQCR11 (ENSSCUG00000002863) #23
Australian saltwater crocodile	MODERN SPECIES	26	MOB3A (ENSCPRG00005009141) #13	MKNK2 (ENSCPRG00005009133) #14	BTBD2 (ENSCPRG00005009092) #15	CSNK1G2 (ENSCPRG00005009075) #16	SCAMP4 (ENSCPRG00005009068) #17	ENSCPRG00005009063	ENSCPRG00005009061	ABHD17A (ENSCPRG00005009059) #18	KLF16 (ENSCPRG00005009055) #19	ENSCPRG00005009053	REXO1 (ENSCPRG00005009036) #20	ENSCPRG00005009034	ATP8B3 (ENSCPRG00005009010) #21	ONECUT3 (ENSCPRG00005008994)	ENSCPRG00005008986	TCF3 (ENSCPRG00005008946) #22	ENSCPRG00005008936	ENSCPRG00005008927 ##24	MEX3D (ENSCPRG00005008924)	ENSCPRG00005008885	ENSCPRG00005008868	MIER2 (ENSCPRG00005008866)	ENSCPRG00005008865	FSD1 (ENSCPRG00005008856)	ENSCPRG00005008853	STAP2 (ENSCPRG00005008852)	MPND (ENSCPRG00005008834)	SH3GL1 (ENSCPRG00005008819)	CHAF1A (ENSCPRG00005008804)	UBXN6 (ENSCPRG00005008794)	ENSCPRG00005008792
Cryptodira	ANCESTRAL SPECIES	19	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000155402.a.a	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30
Testudinoidea	ANCESTRAL SPECIES	39	ENSGT00940000159808	ENSGT00730000114280	ENSGT00390000006337 #9	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000155402.a.a	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30
Testudinidae	ANCESTRAL SPECIES	49	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00960000190793	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299.u.b #23	ENSGT00390000018299.u.a #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000155402.a.a	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30
Goode s thornscrub tortoise	MODERN SPECIES	14	ENSGEVG00005011115	ENSGEVG00005011142	MOB3A (ENSGEVG00005011182) #13	MKNK2 (ENSGEVG00005011216) #14	BTBD2 (ENSGEVG00005011547) #15	CSNK1G2 (ENSGEVG00005011586) #16	SCAMP4 (ENSGEVG00005011640) #17	ENSGEVG00005011683	ENSGEVG00005012056	ABHD17A (ENSGEVG00005012082) #18	KLF16 (ENSGEVG00005012101) #19	REXO1 (ENSGEVG00005012141) #20	ENSGEVG00005012261 #21	ENSGEVG00005012366 #21	ONECUT3 (ENSGEVG00005012425)	TCF3 (ENSGEVG00005012471) #22	ENSGEVG00005012591 #23	ENSGEVG00005012619 ##24	MEX3D (ENSGEVG00005012665)	ENSGEVG00005012690	ENSGEVG00005013038	NFIC (ENSGEVG00005014577)	ENSGEVG00005014641	DOHH (ENSGEVG00005014695) #37	ENSGEVG00005014711	FZR1 (ENSGEVG00005014726) #36	TEKTIP1 (ENSGEVG00005014767) #35	MFSD12 (ENSGEVG00005014847) #34	HMG20B (ENSGEVG00005014871) #33	GIPC3 (ENSGEVG00005014894) #32	TBXA2R (ENSGEVG00005014923) #30
Abingdon island giant tortoise	MODERN SPECIES	2070												REXO1 (ENSCABG00000002446) #20	ENSCABG00000002443	ENSCABG00000002440 #21	ONECUT3 (ENSCABG00000002438)	TCF3 (ENSCABG00000002433) #22	ENSCABG00000002420 #23	ENSCABG00000002416 ##24	MEX3D (ENSCABG00000002414)	ENSCABG00000002407	ENSCABG00000002184	NFIC (ENSCABG00000002165)
Emydidae	ANCESTRAL SPECIES	14	ENSGT00940000159808	ENSGT00390000006337 #9	ENSGT00720000108823 #8	ENSGT00390000005235 #7	ENSGT00390000013515	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000158590 #20	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000155402.a.a	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00500000044957 #37	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30
painted turtle	MODERN SPECIES	763	DOT1L (ENSCPBG00000018560)	AP3D1 (ENSCPBG00000018531) #11	IZUMO4 (ENSCPBG00000018518) #12	MOB3A (ENSCPBG00000018517) #13	MKNK2 (ENSCPBG00000018511) #14	BTBD2 (ENSCPBG00000018507) #15	CSNK1G2 (ENSCPBG00000018498) #16	SCAMP4 (ENSCPBG00000018495) #17	ATP8B3 (ENSCPBG00000018487) #21	ONECUT3 (ENSCPBG00000018480)	ENSCPBG00000018475	ENSCPBG00000018471	ABHD17A (ENSCPBG00000018468) #18	ENSCPBG00000018462	REXO1 (ENSCPBG00000018456) #20	TCF3 (ENSCPBG00000018451) #22	UQCR11 (ENSCPBG00000018448) #23	ENSCPBG00000018443 ##24	MEX3D (ENSCPBG00000018438)	ENSCPBG00000018431	ENSCPBG00000018422	ENSCPBG00000018419	ENSCPBG00000017241	NFIC (ENSCPBG00000017128)	DOHH (ENSCPBG00000017126) #37	ENSCPBG00000017125	FZR1 (ENSCPBG00000017124) #36	ENSCPBG00000017123	ENSCPBG00000017122	ENSCPBG00000017121	ENSCPBG00000017119
Three-toed box turtle	MODERN SPECIES	92	DOT1L (ENSTMTG00000022633)	AP3D1 (ENSTMTG00000022649) #11	MOB3A (ENSTMTG00000022663) #13	MKNK2 (ENSTMTG00000022669) #14	ENSTMTG00000022685 #15	CSNK1G2 (ENSTMTG00000022686) #16	SCAMP4 (ENSTMTG00000022689) #17	ENSTMTG00000022694	ENSTMTG00000022701	ABHD17A (ENSTMTG00000022703) #18	ENSTMTG00000022708	ENSTMTG00000022709	REXO1 (ENSTMTG00000022711) #20	ENSTMTG00000022713 #21	ONECUT3 (ENSTMTG00000022716)	TCF3 (ENSTMTG00000022717) #22	ENSTMTG00000022724	ENSTMTG00000022725 ##24	MEX3D (ENSTMTG00000022729)	ENSTMTG00000022734	ENSTMTG00000022764	ENSTMTG00000022786	NFIC (ENSTMTG00000022787)	DOHH (ENSTMTG00000022789) #37	ENSTMTG00000022790	FZR1 (ENSTMTG00000022792) #36	TEKTIP1 (ENSTMTG00000022799) #35	ENSTMTG00000008062	MFSD12 (ENSTMTG00000008079) #34	HMG20B (ENSTMTG00000008113) #33	ENSTMTG00000008123 #32
Chinese turtle	MODERN SPECIES	1522	AMH (ENSPSIG00000010181) #9	SF3A2 (ENSPSIG00000010839) #8	PLEKHJ1 (ENSPSIG00000011719) #7	DOT1L (ENSPSIG00000011747)	AP3D1 (ENSPSIG00000011804) #11	MOB3A (ENSPSIG00000015264) #13	MKNK2 (ENSPSIG00000015269) #14	BTBD2 (ENSPSIG00000015526) #15	SCAMP4 (ENSPSIG00000015532) #17	ENSPSIG00000016262	ENSPSIG00000016540	ABHD17A (ENSPSIG00000016558) #18	REXO1 (ENSPSIG00000016611) #20	ATP8B3 (ENSPSIG00000016944) #21	ENSPSIG00000000518	TCF3 (ENSPSIG00000004202) #22	ENSPSIG00000004326 ##24	MEX3D (ENSPSIG00000004353)	ENSPSIG00000004377
Lepidosauria	ANCESTRAL SPECIES	33	ENSGT00550000075067 #11	ENSGT00390000015418 #12	ENSGT01050000244898.a.a.a.a #13	ENSGT00940000154587.a.b #14	ENSGT00940000159179 #15	ENSGT00940000156470 #16	ENSGT00940000162150 #17	ENSGT00940000165800	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000155505.b	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00390000018299 #23	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000161905	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00500000044957 #37	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000161213 #33	ENSGT00390000003420.b #32	ENSGT01030000234559.a.a.a #30	ENSGT00950000183102.B ##29
Episquamata	ANCESTRAL SPECIES	18	ENSGT00940000161213 #33	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000165304	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000155505.b	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00950000183005.b.c ##24	ENSGT01000000214836	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000165800	ENSGT00940000162150 #17	ENSGT00940000156470 #16	ENSGT00940000159179 #15	ENSGT00940000154587.a.b #14	ENSGT01050000244898.a.a.a.a #13	ENSGT00390000015418 #12	ENSGT00550000075067 #11	ENSGT00390000013515	ENSGT00390000005235 #7	ENSGT00720000108823 #8
Laterata	ANCESTRAL SPECIES	37	ENSGT01030000234559.a.a.a #30	ENSGT00390000003420.b #32	ENSGT00940000161213 #33	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00940000165115	ENSGT00390000005318.a #34	ENSGT00940000165304	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00940000158590 #20	ENSGT00940000160463.e #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT01000000214836	ENSGT00950000183005.b.d #24	ENSGT00940000162613	ENSGT00940000165800	ENSGT00940000162150 #17	ENSGT00940000156470 #16	ENSGT00940000159179 #15	ENSGT00940000154587.a.b #14	ENSGT01050000244898.a.a.a.a #13	ENSGT00390000015418 #12	ENSGT00550000075067 #11	ENSGT00390000013515	ENSGT00390000005235 #7	ENSGT00720000108823 #8	ENSGT00390000006337 #9
Common wall lizard	MODERN SPECIES	9	CILP2 (ENSPMRG00000021078)	ENSPMRG00000021092 ##29	TBXA2R (ENSPMRG00000021117) #30	ENSPMRG00000021124 #32	HMG20B (ENSPMRG00000021128) #33	FZR1 (ENSPMRG00000021144) #36	ENSPMRG00000021159	DOHH (ENSPMRG00000021166) #37	ENSPMRG00000021682	NFIC (ENSPMRG00000023298)	ABHD17A (ENSPMRG00000023302) #18	ENSPMRG00000023304	REXO1 (ENSPMRG00000023316) #20	ATP8B3 (ENSPMRG00000023348) #21	ONECUT3 (ENSPMRG00000023379)	TCF3 (ENSPMRG00000023382) #22	ENSPMRG00000023385	MBD3 (ENSPMRG00000023387) #24	MEX3D (ENSPMRG00000023388)	ENSPMRG00000023392	RNF224 (ENSPMRG00000023403)	ENSPMRG00000023405	R3HDM4 (ENSPMRG00000023408)	MED16 (ENSPMRG00000023414)	CFD (ENSPMRG00000023415)	PLPPR3 (ENSPMRG00000023417)	PTBP1 (ENSPMRG00000023419)	ENSPMRG00000023423	ENSPMRG00000023426	ENSPMRG00000023427	SIRT6 (ENSPMRG00000023429)
Argentine black and white tegu	MODERN SPECIES	106	FZR1 (ENSSMRG00000010558) #36	TEKTIP1 (ENSSMRG00000010556) #35	ENSSMRG00000010554	MFSD12 (ENSSMRG00000010553) #34	ENSSMRG00000010551	ENSSMRG00000010549	ENSSMRG00000004021	NFIC (ENSSMRG00000004004)	ABHD17A (ENSSMRG00000004000) #18	KLF16 (ENSSMRG00000003993) #19	REXO1 (ENSSMRG00000003986) #20	ENSSMRG00000003975	ENSSMRG00000003970 #21	ENSSMRG00000003958 #21	ONECUT3 (ENSSMRG00000003944)	TCF3 (ENSSMRG00000003939) #22	MBD3 (ENSSMRG00000003933) #24	MEX3D (ENSSMRG00000003931)	ENSSMRG00000003845	SCAMP4 (ENSSMRG00000003842) #17	CSNK1G2 (ENSSMRG00000003837) #16	BTBD2 (ENSSMRG00000003816) #15	MKNK2 (ENSSMRG00000003805) #14	MOB3A (ENSSMRG00000003799) #13	AP3D1 (ENSSMRG00000002687) #11	ENSSMRG00000002684	DOT1L (ENSSMRG00000002660)	PLEKHJ1 (ENSSMRG00000002647) #7	SF3A2 (ENSSMRG00000002642) #8	AMH (ENSSMRG00000002623) #9	OAZ1 (ENSSMRG00000002617)
Toxicofera	ANCESTRAL SPECIES	31	ENSGT00390000003420.b #32	ENSGT00940000161213 #33	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00390000005318.a #34	ENSGT00940000165304	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000155505.b	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000165800	ENSGT00940000162150 #17	ENSGT00940000156470 #16	ENSGT00940000159179 #15	ENSGT00940000154587.a.b #14	ENSGT01050000244898.a.a.a.a #13	ENSGT00960000190793	ENSGT00550000075067 #11	ENSGT00390000013515	ENSGT00390000005235 #7	ENSGT00720000108823 #8	ENSGT00390000006337 #9	ENSGT00940000159808
Elapidae	ANCESTRAL SPECIES	3	ENSGT00940000161213 #33	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00390000005318.a #34	ENSGT00960000190694	ENSGT00940000165304	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000155505.b	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00990000211571	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000165800	ENSGT00940000162150 #17	ENSGT00940000156470 #16	ENSGT00940000159179 #15	ENSGT00940000154587.a.b.b #14	ENSGT01050000244898.a.a.a.a #13	ENSGT00960000190793	ENSGT00550000075067 #11	ENSGT00390000013515	ENSGT00390000005235 #7	ENSGT00720000108823 #8	ENSGT00390000006337 #9
Indian cobra	MODERN SPECIES		TBXA2R (ENSNNAG00000012629) #30	ENSNNAG00000012654 #32	HMG20B (ENSNNAG00000012669) #33	FZR1 (ENSNNAG00000012729) #36	TEKTIP1 (ENSNNAG00000012744) #35	MFSD12 (ENSNNAG00000012793) #34	ENSNNAG00000012815	ENSNNAG00000012846	ENSNNAG00000013151	NFIC (ENSNNAG00000000272)	ABHD17A (ENSNNAG00000000284) #18	ENSNNAG00000000301	REXO1 (ENSNNAG00000000312) #20	ATP8B3 (ENSNNAG00000000342) #21	ONECUT3 (ENSNNAG00000000374)	TCF3 (ENSNNAG00000000394) #22	ENSNNAG00000000420	ENSNNAG00000000432 ##24	MEX3D (ENSNNAG00000000446)	ENSNNAG00000000480	SCAMP4 (ENSNNAG00000000575) #17	CSNK1G2 (ENSNNAG00000000601) #16	BTBD2 (ENSNNAG00000000618) #15	MKNK2 (ENSNNAG00000000630) #14	MOB3A (ENSNNAG00000000647) #13	ENSNNAG00000000652	ENSNNAG00000000664 #11	DOT1L (ENSNNAG00000000692)	PLEKHJ1 (ENSNNAG00000000771) #7	SF3A2 (ENSNNAG00000000788) #8	AMH (ENSNNAG00000000801) #9
Elapidae_a	ANCESTRAL SPECIES	10	ENSGT00940000161213 #33	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00390000005318.a #34	ENSGT00960000190694	ENSGT00940000165304	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000155505.b	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00990000211571.b	ENSGT00950000183005.b.c ##24	ENSGT00990000211571.a	ENSGT00940000162613	ENSGT00940000165800	ENSGT00940000162150 #17	ENSGT00940000156470 #16	ENSGT00940000159179 #15	ENSGT00940000154587.a.b.b #14	ENSGT01050000244898.a.a.a.a #13	ENSGT00960000190793	ENSGT00550000075067 #11	ENSGT00390000013515	ENSGT00390000005235 #7	ENSGT00720000108823 #8
Acanthophiinae	ANCESTRAL SPECIES	13	ENSGT00940000161213 #33	ENSGT00950000183104.B.a.a #36	ENSGT00390000004282 #35	ENSGT00390000005318.a #34	ENSGT00960000190694	ENSGT00940000165304	ENSGT00940000154929.B	ENSGT00950000182916.a.a	ENSGT00940000155854 #18	ENSGT00940000163280 #19	ENSGT00950000185823	ENSGT00940000158590 #20	ENSGT00940000155505.b	ENSGT00940000160463 #21	ENSGT00950000183103.d.b	ENSGT00940000157036 #22	ENSGT00990000211571.b	ENSGT00990000211571.a	ENSGT00950000183005.b.c ##24	ENSGT00940000162613	ENSGT00940000165800	ENSGT00940000162150 #17	ENSGT00940000156470 #16	ENSGT00940000159179 #15	ENSGT00940000154587.a.b.b #14	ENSGT01050000244898.a.a.a.a #13	ENSGT00960000190793	ENSGT00550000075067 #11	ENSGT00390000013515	ENSGT00390000005235 #7	ENSGT00720000108823 #8
Eastern brown snake	MODERN SPECIES	10	HMG20B (ENSPTXG00000000053) #33	FZR1 (ENSPTXG00000000074) #36	TEKTIP1 (ENSPTXG00000000109) #35	MFSD12 (ENSPTXG00000000131) #34	ENSPTXG00000000152	ENSPTXG00000000414	NFIC (ENSPTXG00000001935)	ABHD17A (ENSPTXG00000001937) #18	KLF16 (ENSPTXG00000001939) #19	ENSPTXG00000001941	REXO1 (ENSPTXG00000001945) #20	ENSPTXG00000001948 #21	ENSPTXG00000001950 #21	ONECUT3 (ENSPTXG00000001952)	ENSPTXG00000001953	TCF3 (ENSPTXG00000001955) #22	ENSPTXG00000001956	ENSPTXG00000001957 ##24	MEX3D (ENSPTXG00000001961)	ENSPTXG00000001963	SCAMP4 (ENSPTXG00000001984) #17	CSNK1G2 (ENSPTXG00000001986) #16	BTBD2 (ENSPTXG00000001991) #15	MKNK2 (ENSPTXG00000001992) #14	MOB3A (ENSPTXG00000001997) #13	ENSPTXG00000002003	AP3D1 (ENSPTXG00000002010) #11	DOT1L (ENSPTXG00000002062)	PLEKHJ1 (ENSPTXG00000002073) #7	SF3A2 (ENSPTXG00000002075) #8	AMH (ENSPTXG00000002079) #9
Mainland tiger snake	MODERN SPECIES	144					MFSD12 (ENSNSUG00000007078) #34	ENSNSUG00000007079	ENSNSUG00000007080	ENSNSUG00000007081	NFIC (ENSNSUG00000007496)	ABHD17A (ENSNSUG00000007499) #18	KLF16 (ENSNSUG00000007500) #19	REXO1 (ENSNSUG00000007501) #20	ENSNSUG00000007515	ATP8B3 (ENSNSUG00000007516) #21	ONECUT3 (ENSNSUG00000007538)	TCF3 (ENSNSUG00000007539) #22	ENSNSUG00000007545	ENSNSUG00000007549 ##24	MEX3D (ENSNSUG00000007550)	ENSNSUG00000007551	SCAMP4 (ENSNSUG00000008077) #17	CSNK1G2 (ENSNSUG00000008078) #16	BTBD2 (ENSNSUG00000008079) #15	MKNK2 (ENSNSUG00000008080) #14	MOB3A (ENSNSUG00000008096) #13	ENSNSUG00000008097	AP3D1 (ENSNSUG00000008099) #11	DOT1L (ENSNSUG00000008303)	PLEKHJ1 (ENSNSUG00000008324) #7	SF3A2 (ENSNSUG00000008325) #8	AMH (ENSNSUG00000008326) #9
Blue-lipped sea krait	MODERN SPECIES	3247																TCF3 (ENSLLTG00000017633) #22	ENSLLTG00000017631	ENSLLTG00000017628 ##24
tuatara	MODERN SPECIES	632						CSNK1G2 (ENSSPUG00000016074) #16	SCAMP4 (ENSSPUG00000016062) #17	ENSSPUG00000015977	ENSSPUG00000015961	ABHD17A (ENSSPUG00000015953) #18	KLF16 (ENSSPUG00000015949) #19	REXO1 (ENSSPUG00000015936) #20	ENSSPUG00000015927	ATP8B3 (ENSSPUG00000015886) #21	ONECUT3 (ENSSPUG00000015874)	TCF3 (ENSSPUG00000015862) #22	UQCR11 (ENSSPUG00000015857) #23	ENSSPUG00000015853 ##24	MEX3D (ENSSPUG00000015849)	UNC13A (ENSSPUG00000015816)	NFIC (ENSSPUG00000015778)	DOHH (ENSSPUG00000015767) #37	FZR1 (ENSSPUG00000015746) #36	TEKTIP1 (ENSSPUG00000015730) #35	MFSD12 (ENSSPUG00000015627) #34	HMG20B (ENSSPUG00000015595) #33	ENSSPUG00000015524 ##29	PIP5K1C (ENSSPUG00000015473) #28	TJP3 (ENSSPUG00000015413) #27	APBA3 (ENSSPUG00000015379) #26	MRPL54 (ENSSPUG00000015361) #25