Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000164559.B	ENSGT00940000161073	ENSGT00770000121731
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000164559.B	ENSGT00940000161073	ENSGT00770000121731
Carnivora	ANCESTRAL SPECIES	14	ENSGT00950000182971.B.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00950000182891.a.a.b.a.b.b.b	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00770000121731
Caniformia	ANCESTRAL SPECIES	10	ENSGT00950000182971.B.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00950000182891.a.a.b.a.b.b.a	ENSGT00950000182891.a.a.b.a.b.b.b	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073
Caniformia_b	ANCESTRAL SPECIES	8	ENSGT00950000182971.B.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00770000121731	ENSGT00390000014184 #31
Mustelinae	ANCESTRAL SPECIES	23	ENSGT00950000182971.B.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #24	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33	ENSGT00390000008274 #34	ENSGT00390000002869 #35
Ferret	MODERN SPECIES	510					ENSMPUG00000007123 #11	ADAR (ENSMPUG00000007140) #12	CHRNB2 (ENSMPUG00000007148) #13	ENSMPUG00000019806 #14	UBE2Q1 (ENSMPUG00000007178) #15	SHE (ENSMPUG00000007337) #16	IL6R (ENSMPUG00000007346) #17	ATP8B2 (ENSMPUG00000007409) #18	AQP10 (ENSMPUG00000007728) #19	ENSMPUG00000007808 #20	UBAP2L (ENSMPUG00000007820) #21	C1orf43 (ENSMPUG00000007840) #22	ENSMPUG00000007875 #23	NUP210L (ENSMPUG00000007880) #24	RAB13 (ENSMPUG00000007896) #25	CREB3L4 (ENSMPUG00000007975) #26	SLC39A1 (ENSMPUG00000007981) #27	CRTC2 (ENSMPUG00000007999) #28	DENND4B (ENSMPUG00000008118) #29	GATAD2B (ENSMPUG00000008136) #30	INTS3 (ENSMPUG00000008221) #31	NPR1 (ENSMPUG00000008249) #32	ILF2 (ENSMPUG00000008267) #33	SNAPIN (ENSMPUG00000008280) #34	CHTOP (ENSMPUG00000008311) #35	S100A1 (ENSMPUG00000008315) #36	S100A13 (ENSMPUG00000008336) #37
American mink	MODERN SPECIES	260	CKS1B (ENSNVIG00000018437)	SHC1 (ENSNVIG00000018406)	PYGO2 (ENSNVIG00000018388)	PBXIP1 (ENSNVIG00000018377)	PMVK (ENSNVIG00000018365)	KCNN3 (ENSNVIG00000018299) #11	ADAR (ENSNVIG00000018260) #12	CHRNB2 (ENSNVIG00000018252) #13	UBE2Q1 (ENSNVIG00000018237) #15	SHE (ENSNVIG00000018220) #16	ENSNVIG00000018215 #17	ATP8B2 (ENSNVIG00000018053) #18	AQP10 (ENSNVIG00000018004) #19	HAX1 (ENSNVIG00000017973) #20	UBAP2L (ENSNVIG00000017775) #21	C1orf43 (ENSNVIG00000017630) #22	ENSNVIG00000017428 #23	ENSNVIG00000017372 #24	ENSNVIG00000017361	RAB13 (ENSNVIG00000017346) #25	ENSNVIG00000017323	CREB3L4 (ENSNVIG00000017267) #26	SLC39A1 (ENSNVIG00000017250) #27	ENSNVIG00000017244	CRTC2 (ENSNVIG00000017220) #28	DENND4B (ENSNVIG00000017178) #29	GATAD2B (ENSNVIG00000017138) #30	SLC27A3 (ENSNVIG00000017050)	INTS3 (ENSNVIG00000015347) #31	NPR1 (ENSNVIG00000015213) #32	ILF2 (ENSNVIG00000015154) #33
Ursidae	ANCESTRAL SPECIES	4	ENSGT00950000182971.B.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00770000121731	ENSGT00390000014184 #31
Ursus	ANCESTRAL SPECIES	72	ENSGT00950000182971.B.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073.c	ENSGT00770000121731	ENSGT00940000161073.d	ENSGT00390000014184 #31
Polar bear	MODERN SPECIES	200	FLAD1 (ENSUMAG00000019754)	CKS1B (ENSUMAG00000019771)	SHC1 (ENSUMAG00000019824)	ENSUMAG00000019912	PMVK (ENSUMAG00000019919)	KCNN3 (ENSUMAG00000019928) #11	ADAR (ENSUMAG00000019958) #12	CHRNB2 (ENSUMAG00000019965) #13	UBE2Q1 (ENSUMAG00000019971) #15	SHE (ENSUMAG00000019978) #16	IL6R (ENSUMAG00000019986) #17	ATP8B2 (ENSUMAG00000019998) #18	AQP10 (ENSUMAG00000020094) #19	HAX1 (ENSUMAG00000020103) #20	UBAP2L (ENSUMAG00000020128) #21	C1orf43 (ENSUMAG00000020190) #22	CFAP141 (ENSUMAG00000020216)	ENSUMAG00000020221 #23	NUP210L (ENSUMAG00000020243) #24	RAB13 (ENSUMAG00000020303) #25	JTB (ENSUMAG00000020309)	CREB3L4 (ENSUMAG00000020311) #26	SLC39A1 (ENSUMAG00000020316) #27	CRTC2 (ENSUMAG00000020324) #28	GATAD2B (ENSUMAG00000020377) #30	SLC27A3 (ENSUMAG00000020383)	ENSUMAG00000020425	INTS3 (ENSUMAG00000020431) #31	NPR1 (ENSUMAG00000020479) #32	ILF2 (ENSUMAG00000020682) #33	CHTOP (ENSUMAG00000020689) #35
American black bear	MODERN SPECIES	1287																C1orf43 (ENSUAMG00000024389) #22	CFAP141 (ENSUAMG00000024388)	ENSUAMG00000024387 #23	TPM3 (ENSUAMG00000024386) ##23	NUP210L (ENSUAMG00000024385) #24	ENSUAMG00000024384	RAB13 (ENSUAMG00000024383) #25	JTB (ENSUAMG00000024382)	CREB3L4 (ENSUAMG00000024381) #26	SLC39A1 (ENSUAMG00000024380) #27	ENSUAMG00000024379 #28	ENSUAMG00000024378 #28	DENND4B (ENSUAMG00000024372) #29
Giant Panda	MODERN SPECIES	18	ENSAMEG00000024176	SHC1 (ENSAMEG00000011498)	PYGO2 (ENSAMEG00000011539)	PBXIP1 (ENSAMEG00000011551)	PMVK (ENSAMEG00000011559)	KCNN3 (ENSAMEG00000011569) #11	ADAR (ENSAMEG00000011594) #12	CHRNB2 (ENSAMEG00000011599) #13	ENSAMEG00000011611 #15	SHE (ENSAMEG00000011664) #16	IL6R (ENSAMEG00000011676) #17	ATP8B2 (ENSAMEG00000011695) #18	AQP10 (ENSAMEG00000011745) #19	HAX1 (ENSAMEG00000011750) #20	UBAP2L (ENSAMEG00000011772) #21	C1orf43 (ENSAMEG00000011865) #22	CFAP141 (ENSAMEG00000029690)	ENSAMEG00000011877 #23	NUP210L (ENSAMEG00000011885) #24	RPS27 (ENSAMEG00000011918)	RAB13 (ENSAMEG00000011919) #25	JTB (ENSAMEG00000011934)	CREB3L4 (ENSAMEG00000011947) #26	SLC39A1 (ENSAMEG00000011965) #27	ENSAMEG00000011971 #28	ENSAMEG00000012085 #31	DENND4B (ENSAMEG00000011996) #29	ENSAMEG00000012036 #30	SLC27A3 (ENSAMEG00000012056)	NPR1 (ENSAMEG00000012126) #32	ILF2 (ENSAMEG00000012155) #33
Canidae	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.z.b #20	ENSGT00390000018324.z.a #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00950000182891.a.a.b.a.b.b.b	ENSGT00940000159989.i.a #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33
Red fox	MODERN SPECIES	23	CKS1B (ENSVVUG00000001940)	SHC1 (ENSVVUG00000001922)	PYGO2 (ENSVVUG00000001909)	PBXIP1 (ENSVVUG00000001899)	PMVK (ENSVVUG00000001879)	KCNN3 (ENSVVUG00000001873) #11	ADAR (ENSVVUG00000001831) #12	CHRNB2 (ENSVVUG00000001790) #13	UBE2Q1 (ENSVVUG00000001767) #15	SHE (ENSVVUG00000001751) #16	IL6R (ENSVVUG00000001704) #17	ATP8B2 (ENSVVUG00000000515) #18	AQP10 (ENSVVUG00000000315) #19	ENSVVUG00000000252 #20	UBAP2L (ENSVVUG00000000212) #21	CUNH1orf43 (ENSVVUG00000000194) #22	ENSVVUG00000000125	CFAP141 (ENSVVUG00000028643)	ENSVVUG00000028641 #23	TPM3 (ENSVVUG00000028640) ##23	ENSVVUG00000028639	NUP210L (ENSVVUG00000028380) #24	ENSVVUG00000028354 #25	JTB (ENSVVUG00000028352)	CREB3L4 (ENSVVUG00000028345) #26	SLC39A1 (ENSVVUG00000028343) #27	CRTC2 (ENSVVUG00000028288) #28	DENND4B (ENSVVUG00000028280) #29	GATAD2B (ENSVVUG00000028277) #30	ENSVVUG00000028276	INTS3 (ENSVVUG00000028270)
Canis_lupus	ANCESTRAL SPECIES	4	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.z.b #20	ENSGT00390000018324.y #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00940000159989.j #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33	ENSGT00390000008274 #34	ENSGT00390000002869 #35
Dog	MODERN SPECIES	35	FLAD1 (ENSCAFG00845014003)	CKS1B (ENSCAFG00845014039)	SHC1 (ENSCAFG00845014088)	PYGO2 (ENSCAFG00845014125)	PBXIP1 (ENSCAFG00845014145)	PMVK (ENSCAFG00845014186)	KCNN3 (ENSCAFG00845014229) #11	ADAR (ENSCAFG00845014266) #12	CHRNB2 (ENSCAFG00845014294) #13	UBE2Q1 (ENSCAFG00845014318) #15	SHE (ENSCAFG00845014347) #16	IL6R (ENSCAFG00845014397) #17	ATP8B2 (ENSCAFG00845014509) #18	AQP10 (ENSCAFG00845014670) #19	ENSCAFG00845014707 #20	C7H1orf43 (ENSCAFG00845014887) #22	TPM3 (ENSCAFG00845015257) ##23	NUP210L (ENSCAFG00845015658) #24	ENSCAFG00845016108	ENSCAFG00845016149	RPS27 (ENSCAFG00845016218)	RAB13 (ENSCAFG00845016274) #25	JTB (ENSCAFG00845016331)	CREB3L4 (ENSCAFG00845016392) #26	SLC39A1 (ENSCAFG00845016459) #27	CRTC2 (ENSCAFG00845016688) #28	DENND4B (ENSCAFG00845016924) #29	GATAD2B (ENSCAFG00845001378) #30	NPR1 (ENSCAFG00845001483) #32	SLC27A3 (ENSCAFG00845001620)	INTS3 (ENSCAFG00845001651) #31
Dingo	MODERN SPECIES	271	SHC1 (ENSCAFG00020007985)	PYGO2 (ENSCAFG00020008152)	PBXIP1 (ENSCAFG00020008160)	PMVK (ENSCAFG00020008168)	KCNN3 (ENSCAFG00020008194) #11	ADAR (ENSCAFG00020008204) #12	CHRNB2 (ENSCAFG00020008218) #13	UBE2Q1 (ENSCAFG00020008236) #15	SHE (ENSCAFG00020008246) #16	IL6R (ENSCAFG00020008264) #17	ATP8B2 (ENSCAFG00020008340) #18	ENSCAFG00020008357 #19	ENSCAFG00020008364 #20	ENSCAFG00020008369 #20	UBAP2L (ENSCAFG00020008373) #21	C1orf43 (ENSCAFG00020008410) #22	TPM3 (ENSCAFG00020008442) ##23	NUP210L (ENSCAFG00020009182) #24	ENSCAFG00020009234	ENSCAFG00020009238	ENSCAFG00020009254	ENSCAFG00020009258 #25	JTB (ENSCAFG00020009267)	CREB3L4 (ENSCAFG00020009278) #26	SLC39A1 (ENSCAFG00020009280) #27	CRTC2 (ENSCAFG00020009299) #28	DENND4B (ENSCAFG00020009558) #29	GATAD2B (ENSCAFG00020010206) #30	SLC27A3 (ENSCAFG00020010257)	INTS3 (ENSCAFG00020010273) #31	NPR1 (ENSCAFG00020010282) #32
Felidae	ANCESTRAL SPECIES	11	ENSGT00950000182971.B.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33
Panthera	ANCESTRAL SPECIES	38	ENSGT00950000182971.B.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.b.b	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33
Panthera_a	ANCESTRAL SPECIES	37	ENSGT00950000182971.B.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.b.b	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33
lion	MODERN SPECIES	49									UBE2Q1 (ENSPLOG00000005602) #15	SHE (ENSPLOG00000005657) #16	IL6R (ENSPLOG00000005706) #17	ATP8B2 (ENSPLOG00000005778) #18	AQP10 (ENSPLOG00000005999) #19	HAX1 (ENSPLOG00000006043) #20	UBAP2L (ENSPLOG00000006160) #21	C1orf43 (ENSPLOG00000007647) #22	CFAP141 (ENSPLOG00000007762)	ENSPLOG00000007922 #23	NUP210L (ENSPLOG00000008638) #24	ENSPLOG00000009182	RAB13 (ENSPLOG00000009240) #25	JTB (ENSPLOG00000009315)	CREB3L4 (ENSPLOG00000009352) #26	SLC39A1 (ENSPLOG00000009417) #27	CRTC2 (ENSPLOG00000009490) #28	DENND4B (ENSPLOG00000009629) #29	GATAD2B (ENSPLOG00000009690) #30	SLC27A3 (ENSPLOG00000009744)	INTS3 (ENSPLOG00000009816) #31	NPR1 (ENSPLOG00000010004) #32	ILF2 (ENSPLOG00000010111) #33
leopard	MODERN SPECIES	138	FLAD1 (ENSPPRG00000024381)	CKS1B (ENSPPRG00000024183)	SHC1 (ENSPPRG00000023859)	PYGO2 (ENSPPRG00000023417)	PMVK (ENSPPRG00000000438)	KCNN3 (ENSPPRG00000001632) #11	ADAR (ENSPPRG00000001779) #12	CHRNB2 (ENSPPRG00000002059) #13	UBE2Q1 (ENSPPRG00000005434) #15	SHE (ENSPPRG00000006536) #16	IL6R (ENSPPRG00000008215) #17	ATP8B2 (ENSPPRG00000010347) #18	AQP10 (ENSPPRG00000016336) #19	HAX1 (ENSPPRG00000019472) #20	UBAP2L (ENSPPRG00000024589) #21	C1orf43 (ENSPPRG00000023434) #22	CFAP141 (ENSPPRG00000023315)	ENSPPRG00000003861 #23	NUP210L (ENSPPRG00000008018) #24	ENSPPRG00000008208	RAB13 (ENSPPRG00000008865) #25	JTB (ENSPPRG00000009055)	CREB3L4 (ENSPPRG00000009607) #26	SLC39A1 (ENSPPRG00000010207) #27	CRTC2 (ENSPPRG00000010452) #28	DENND4B (ENSPPRG00000012451) #29	GATAD2B (ENSPPRG00000015198) #30	SLC27A3 (ENSPPRG00000024717)	INTS3 (ENSPPRG00000023995) #31	NPR1 (ENSPPRG00000023804) #32	ILF2 (ENSPPRG00000023707) #33
Tiger	MODERN SPECIES	274	FLAD1 (ENSPTIG00000016069)	CKS1B (ENSPTIG00000017014)	SHC1 (ENSPTIG00000017438)	PYGO2 (ENSPTIG00000018594)	PMVK (ENSPTIG00000019025)	ENSPTIG00000019211 #11	ENSPTIG00000019964 #12	CHRNB2 (ENSPTIG00000020161) #13	ENSPTIG00000020922 #15	ENSPTIG00000021065 #16	ENSPTIG00000021560 #17	ENSPTIG00000001603 #18	AQP10 (ENSPTIG00000006017) #19	HAX1 (ENSPTIG00000006813) #20	UBAP2L (ENSPTIG00000008318) #21	C1orf43 (ENSPTIG00000015880) #22	ENSPTIG00000018941	ENSPTIG00000019870 #23	NUP210L (ENSPTIG00000020585) #24	ENSPTIG00000021840	RAB13 (ENSPTIG00000021869) #25	JTB (ENSPTIG00000021924)	CREB3L4 (ENSPTIG00000022008) #26	ENSPTIG00000005882 #27	CRTC2 (ENSPTIG00000006256) #28	GATAD2B (ENSPTIG00000007695) #30	SLC27A3 (ENSPTIG00000010006)	INTS3 (ENSPTIG00000012061) #31	NPR1 (ENSPTIG00000017104) #32	ILF2 (ENSPTIG00000017810) #33	SNAPIN (ENSPTIG00000018449) #34
Cat	MODERN SPECIES	248	CKS1B (ENSFCAG00000032392)	SHC1 (ENSFCAG00000001346)	PYGO2 (ENSFCAG00000037751)	PBXIP1 (ENSFCAG00000001344)	PMVK (ENSFCAG00000001343)	KCNN3 (ENSFCAG00000008233) #11	ADAR (ENSFCAG00000001341) #12	CHRNB2 (ENSFCAG00000022169) #13	UBE2Q1 (ENSFCAG00000026274) #15	SHE (ENSFCAG00000008746) #16	IL6R (ENSFCAG00000026747) #17	ATP8B2 (ENSFCAG00000010416) #18	AQP10 (ENSFCAG00000007072) #19	HAX1 (ENSFCAG00000031262) #20	UBAP2L (ENSFCAG00000010414) #21	CF1H1orf43 (ENSFCAG00000012597) #22	TPM3 (ENSFCAG00000040513) ##23	NUP210L (ENSFCAG00000012595) #24	RPS27 (ENSFCAG00000039538)	RAB13 (ENSFCAG00000045269) #25	JTB (ENSFCAG00000012590)	CREB3L4 (ENSFCAG00000012586) #26	SLC39A1 (ENSFCAG00000026335) #27	CRTC2 (ENSFCAG00000001298) #28	DENND4B (ENSFCAG00000028483) #29	GATAD2B (ENSFCAG00000002751) #30	SLC27A3 (ENSFCAG00000002749)	INTS3 (ENSFCAG00000002744) #31	NPR1 (ENSFCAG00000002743) #32	ILF2 (ENSFCAG00000008171) #33	SNAPIN (ENSFCAG00000008170) #34
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000164559.B	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32
Chiroptera	ANCESTRAL SPECIES	20	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33
Megabat	MODERN SPECIES	1053												ATP8B2 (ENSPVAG00000002734) #18	AQP10 (ENSPVAG00000002732) #19	HAX1 (ENSPVAG00000002728) #20	UBAP2L (ENSPVAG00000002721) #21	C1orf43 (ENSPVAG00000002717) #22	ENSPVAG00000002715	TPM3 (ENSPVAG00000002713) ##23
Microchiroptera	ANCESTRAL SPECIES	21	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1088	SHC1 (ENSMLUG00000002396)	PYGO2 (ENSMLUG00000002389)	PBXIP1 (ENSMLUG00000002380)	PMVK (ENSMLUG00000002376)	KCNN3 (ENSMLUG00000002369) #11	ADAR (ENSMLUG00000017678) #12	CHRNB2 (ENSMLUG00000007541) #13	ENSMLUG00000023082	UBE2Q1 (ENSMLUG00000017677) #15	TDRD10 (ENSMLUG00000017676)	SHE (ENSMLUG00000005436) #16	ENSMLUG00000005427 #17	ATP8B2 (ENSMLUG00000014400) #18	HAX1 (ENSMLUG00000012947) #20	UBAP2L (ENSMLUG00000012931) #21	ENSMLUG00000013338 #22	CFAP141 (ENSMLUG00000013334)	TPM3 (ENSMLUG00000013331) ##23	NUP210L (ENSMLUG00000013302) #24	ENSMLUG00000017188	RAB13 (ENSMLUG00000017186) #25	JTB (ENSMLUG00000013299)	CREB3L4 (ENSMLUG00000013291) #26	SLC39A1 (ENSMLUG00000013282) #27	CRTC2 (ENSMLUG00000013266) #28	DENND4B (ENSMLUG00000013245) #29	GATAD2B (ENSMLUG00000004859) #30	SLC27A3 (ENSMLUG00000001876)	INTS3 (ENSMLUG00000001857) #31	NPR1 (ENSMLUG00000001852) #32	ENSMLUG00000001847 #33
Microbat	MODERN SPECIES	995	MTCL1 (ENSMLUG00000002889)	RAB12 (ENSMLUG00000002883)	PTPRM (ENSMLUG00000016507)	LRRC30 (ENSMLUG00000004630)	LAMA1 (ENSMLUG00000004002)	ARHGAP28 (ENSMLUG00000005314)	ENSMLUG00000023508	L3MBTL4 (ENSMLUG00000002011)	EPB41L3 (ENSMLUG00000016125)	ZBTB14 (ENSMLUG00000016123)	ENSMLUG00000030528	DLGAP1 (ENSMLUG00000012142)	TGIF1 (ENSMLUG00000025199)	MYL12B (ENSMLUG00000005189)	MYOM1 (ENSMLUG00000003417)	ENSMLUG00000029548 #22	LPIN2 (ENSMLUG00000003403)	EMILIN2 (ENSMLUG00000003397)	SMCHD1 (ENSMLUG00000003378)	NDC80 (ENSMLUG00000003354)	METTL4 (ENSMLUG00000003351)
Greater horseshoe bat	MODERN SPECIES	14					KCNN3 (ENSRFEG00010019684) #11	ADAR (ENSRFEG00010019633) #12	CHRNB2 (ENSRFEG00010019597) #13	UBE2Q1 (ENSRFEG00010019550) #15	TDRD10 (ENSRFEG00010019390)	SHE (ENSRFEG00010019326) #16	IL6R (ENSRFEG00010019174) #17	ATP8B2 (ENSRFEG00010018802) #18	AQP10 (ENSRFEG00010018725) #19	HAX1 (ENSRFEG00010018647) #20	UBAP2L (ENSRFEG00010018473) #21	C1orf43 (ENSRFEG00010018213) #22	ENSRFEG00010017998 #23	NUP210L (ENSRFEG00010016772) #24	ENSRFEG00010016684	RAB13 (ENSRFEG00010016602) #25	ENSRFEG00010016517	CREB3L4 (ENSRFEG00010016292) #26	SLC39A1 (ENSRFEG00010016233) #27	CRTC2 (ENSRFEG00010016088) #28	DENND4B (ENSRFEG00010016057) #29	GATAD2B (ENSRFEG00010015979) #30	ENSRFEG00010015793	SLC27A3 (ENSRFEG00010015641)	INTS3 (ENSRFEG00010015572) #31	NPR1 (ENSRFEG00010015519) #32	SNAPIN (ENSRFEG00010015441) #34
Equus	ANCESTRAL SPECIES	3	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000164559.B	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32
Horse	MODERN SPECIES	26	SHC1 (ENSECAG00000003967)	PYGO2 (ENSECAG00000015057)	PBXIP1 (ENSECAG00000026849)	PMVK (ENSECAG00000016089)	KCNN3 (ENSECAG00000018199) #11	ADAR (ENSECAG00000000974) #12	CHRNB2 (ENSECAG00000016633) #13	UBE2Q1 (ENSECAG00000016647) #15	ENSECAG00000023297	SHE (ENSECAG00000023754) #16	IL6R (ENSECAG00000024047) #17	ATP8B2 (ENSECAG00000001415) #18	AQP10 (ENSECAG00000033720) #19	HAX1 (ENSECAG00000027002) #20	UBAP2L (ENSECAG00000005014) #21	C1orf43 (ENSECAG00000017585) #22	NUP210L (ENSECAG00000002401) #24	RAB13 (ENSECAG00000016551) #25	JTB (ENSECAG00000035110)	CREB3L4 (ENSECAG00000017552) #26	SLC39A1 (ENSECAG00000020739) #27	CRTC2 (ENSECAG00000023238) #28	DENND4B (ENSECAG00000007422) #29	GATAD2B (ENSECAG00000011357) #30	ENSECAG00000014805	SLC27A3 (ENSECAG00000015841)	INTS3 (ENSECAG00000022270) #31	NPR1 (ENSECAG00000000954) #32	ILF2 (ENSECAG00000008567) #33	SNAPIN (ENSECAG00000020426) #34	CHTOP (ENSECAG00000020889) #35
Donkey	MODERN SPECIES	17	SHC1 (ENSEASG00005000225)	PYGO2 (ENSEASG00005000238)	PBXIP1 (ENSEASG00005026805)	PMVK (ENSEASG00005038399)	KCNN3 (ENSEASG00005000281) #11	ADAR (ENSEASG00005000290) #12	CHRNB2 (ENSEASG00005000300) #13	UBE2Q1 (ENSEASG00005000305) #15	ENSEASG00005000310	SHE (ENSEASG00005031571) #16	IL6R (ENSEASG00005000344) #17	ATP8B2 (ENSEASG00005000350) #18	AQP10 (ENSEASG00005000379) #19	HAX1 (ENSEASG00005000433) #20	UBAP2L (ENSEASG00005000449) #21	C1orf43 (ENSEASG00005026219) #22	CFAP141 (ENSEASG00005033316)	TPM3 (ENSEASG00005000501) ##23	NUP210L (ENSEASG00005000514) #24	ENSEASG00005038700	RPS27 (ENSEASG00005000650)	RAB13 (ENSEASG00005000683) #25	JTB (ENSEASG00005024586)	CREB3L4 (ENSEASG00005000725) #26	SLC39A1 (ENSEASG00005031953) #27	CRTC2 (ENSEASG00005000736) #28	DENND4B (ENSEASG00005000741) #29	GATAD2B (ENSEASG00005000752) #30	ENSEASG00005000764	SLC27A3 (ENSEASG00005000821)	INTS3 (ENSEASG00005000830) #31
Artiodactyla	ANCESTRAL SPECIES		ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32
Camelidae	ANCESTRAL SPECIES	6	ENSGT00950000182971.B.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.b.b	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33	ENSGT00390000008274 #34
Arabian camel	MODERN SPECIES	13	SHC1 (ENSCDRG00005003979)	PYGO2 (ENSCDRG00005003934)	PBXIP1 (ENSCDRG00005003867)	PMVK (ENSCDRG00005003806)	KCNN3 (ENSCDRG00005003748) #11	ENSCDRG00005003703	ADAR (ENSCDRG00005003637) #12	CHRNB2 (ENSCDRG00005003608) #13	UBE2Q1 (ENSCDRG00005019653) #15	TDRD10 (ENSCDRG00005019630)	SHE (ENSCDRG00005019620) #16	IL6R (ENSCDRG00005019596) #17	ATP8B2 (ENSCDRG00005019499) #18	HAX1 (ENSCDRG00005019427) #20	UBAP2L (ENSCDRG00005019154) #21	C1orf43 (ENSCDRG00005018792) #22	CFAP141 (ENSCDRG00005018735)	ENSCDRG00005018555 #23	ENSCDRG00005018510	NUP210L (ENSCDRG00005017968) #24	ENSCDRG00005017869	RAB13 (ENSCDRG00005017815) #25	JTB (ENSCDRG00005017759)	CREB3L4 (ENSCDRG00005017685) #26	SLC39A1 (ENSCDRG00005017657) #27	CRTC2 (ENSCDRG00005017593) #28	DENND4B (ENSCDRG00005017335) #29	ENSCDRG00005017291	SLC27A3 (ENSCDRG00005017215)	INTS3 (ENSCDRG00005017050) #31	NPR1 (ENSCDRG00005016967) #32
Alpaca	MODERN SPECIES	880															UBAP2L (ENSVPAG00000001004) #21	C1orf43 (ENSVPAG00000001003) #22	CFAP141 (ENSVPAG00000001002)	TPM3 (ENSVPAG00000001001) ##23
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32
Pecora	ANCESTRAL SPECIES	2	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a.m	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33
Yarkand deer	MODERN SPECIES	12	FLAD1 (ENSCHYG00000008080)	CKS1B (ENSCHYG00000008141)	SHC1 (ENSCHYG00000008207)	PYGO2 (ENSCHYG00000008470)	PBXIP1 (ENSCHYG00000008504)	PMVK (ENSCHYG00000008653)	KCNN3 (ENSCHYG00000008575) #11	ADAR (ENSCHYG00000008727) #12	CHRNB2 (ENSCHYG00000008890) #13	UBE2Q1 (ENSCHYG00000008978) #15	IL6R (ENSCHYG00000009161) #17	SHE (ENSCHYG00000009423) #16	ATP8B2 (ENSCHYG00000009554) #18	HAX1 (ENSCHYG00000010337) #20	UBAP2L (ENSCHYG00000010563) #21	C1orf43 (ENSCHYG00000011169) #22	ENSCHYG00000011554 #23	NUP210L (ENSCHYG00000013411) #24	ENSCHYG00000014516	ENSCHYG00000014536	RAB13 (ENSCHYG00000014586) #25	JTB (ENSCHYG00000014678)	CREB3L4 (ENSCHYG00000014741) #26	SLC39A1 (ENSCHYG00000014942) #27	CRTC2 (ENSCHYG00000015036) #28	DENND4B (ENSCHYG00000015567) #29	GATAD2B (ENSCHYG00000015975) #30	SLC27A3 (ENSCHYG00000016208)	INTS3 (ENSCHYG00000016404) #31	NPR1 (ENSCHYG00000017011) #32	ILF2 (ENSCHYG00000017299) #33
Percora_a	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a.m	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33
Siberian musk deer	MODERN SPECIES	1202	FLAD1 (ENSMMSG00000009964)	CKS1B (ENSMMSG00000010032)	SHC1 (ENSMMSG00000010085)	PBXIP1 (ENSMMSG00000010216)	PMVK (ENSMMSG00000010308)	KCNN3 (ENSMMSG00000010353) #11	ADAR (ENSMMSG00000010532) #12	CHRNB2 (ENSMMSG00000010601) #13	UBE2Q1 (ENSMMSG00000010661) #15	TDRD10 (ENSMMSG00000010722)	SHE (ENSMMSG00000010799) #16	IL6R (ENSMMSG00000010839) #17	ATP8B2 (ENSMMSG00000010900) #18	AQP10 (ENSMMSG00000011185) #19	UBAP2L (ENSMMSG00000011299) #21	C1orf43 (ENSMMSG00000011796) #22	CFAP141 (ENSMMSG00000011935)	ENSMMSG00000012023 #23	NUP210L (ENSMMSG00000012518) #24	ENSMMSG00000012901	RAB13 (ENSMMSG00000012924) #25	JTB (ENSMMSG00000012947)	CREB3L4 (ENSMMSG00000012967) #26	SLC39A1 (ENSMMSG00000013005) #27	ENSMMSG00000013036 #28	DENND4B (ENSMMSG00000013175) #29	GATAD2B (ENSMMSG00000013259) #30	SLC27A3 (ENSMMSG00000013293)	INTS3 (ENSMMSG00000013366) #31	NPR1 (ENSMMSG00000013448) #32	ILF2 (ENSMMSG00000013509) #33
Bovidae	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a.m	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33
Bovinae	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a.m.b	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33
American bison	MODERN SPECIES	3022	PYGO2 (ENSBBBG00000003118)	PBXIP1 (ENSBBBG00000014024)	PMVK (ENSBBBG00000003100)	ENSBBBG00000003096	KCNN3 (ENSBBBG00000003095) #11	ADAR (ENSBBBG00000014003) #12	CHRNB2 (ENSBBBG00000013928) #13	UBE2Q1 (ENSBBBG00000002895) #15	TDRD10 (ENSBBBG00000013905)	SHE (ENSBBBG00000003009) #16	IL6R (ENSBBBG00000013889) #17	ATP8B2 (ENSBBBG00000002983) #18	ENSBBBG00000013824 #19	HAX1 (ENSBBBG00000013795) #20	UBAP2L (ENSBBBG00000008742) #21	C1orf43 (ENSBBBG00000013653) #22	CFAP141 (ENSBBBG00000013575)	ENSBBBG00000007596 #23	NUP210L (ENSBBBG00000002737) #24	ENSBBBG00000013268	RAB13 (ENSBBBG00000013260) #25	JTB (ENSBBBG00000002677)	CREB3L4 (ENSBBBG00000013242) #26	SLC39A1 (ENSBBBG00000013213) #27	CRTC2 (ENSBBBG00000013195) #28	DENND4B (ENSBBBG00000002661) #29	GATAD2B (ENSBBBG00000013108) #30	SLC27A3 (ENSBBBG00000013085)	NPR1 (ENSBBBG00000002615) #32	ILF2 (ENSBBBG00000013053) #33	SNAPIN (ENSBBBG00000013033) #34
Bos	ANCESTRAL SPECIES		ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a.m.b	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879.r #33
Bos_b	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.a.b	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.b.a.a.b.a	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a.m.b	ENSGT00390000004856.w.a.a.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32
Hybrid Bos Indicus	MODERN SPECIES	22	SHC1 (ENSBIXG00005010316)	PBXIP1 (ENSBIXG00005010243)	PMVK (ENSBIXG00005010164)	KCNN3 (ENSBIXG00005010117) #11	ADAR (ENSBIXG00005010010) #12	ENSBIXG00005006102	CHRNB2 (ENSBIXG00005009910) #13	UBE2Q1 (ENSBIXG00005005947) #15	TDRD10 (ENSBIXG00005009837)	SHE (ENSBIXG00005009819) #16	IL6R (ENSBIXG00005009808) #17	ATP8B2 (ENSBIXG00005000594) #18	ENSBIXG00005009609 #19	HAX1 (ENSBIXG00005009491) #20	UBAP2L (ENSBIXG00005009439) #21	C1orf43 (ENSBIXG00005009324) #22	CFAP141 (ENSBIXG00005006307)	TPM3 (ENSBIXG00005009222) ##23	NUP210L (ENSBIXG00005009088) #24	ENSBIXG00005008876	ENSBIXG00005000302	RAB13 (ENSBIXG00005000300) #25	JTB (ENSBIXG00005000281)	CREB3L4 (ENSBIXG00005008772) #26	SLC39A1 (ENSBIXG00005000255) #27	ENSBIXG00005008708 #28	DENND4B (ENSBIXG00005008651) #29	GATAD2B (ENSBIXG00005008595) #30	ENSBIXG00005000217	SLC27A3 (ENSBIXG00005008567)	INTS3 (ENSBIXG00005008552) #31
Cow	MODERN SPECIES	22	SHC1 (ENSBTAG00000019838)	PBXIP1 (ENSBTAG00000004552)	PMVK (ENSBTAG00000017819)	KCNN3 (ENSBTAG00000018249) #11	ADAR (ENSBTAG00000007519) #12	ENSBTAG00000048725	CHRNB2 (ENSBTAG00000007517) #13	UBE2Q1 (ENSBTAG00000007515) #15	TDRD10 (ENSBTAG00000011881)	SHE (ENSBTAG00000020542) #16	IL6R (ENSBTAG00000018474) #17	ATP8B2 (ENSBTAG00000005161) #18	AQP10 (ENSBTAG00000005149) #19	HAX1 (ENSBTAG00000013025) #20	UBAP2L (ENSBTAG00000004271) #21	C3H1orf43 (ENSBTAG00000020026) #22	CFAP141 (ENSBTAG00000033220)	TPM3 (ENSBTAG00000033217) ##23	NUP210L (ENSBTAG00000004987) #24	ENSBTAG00000024487	RPS27 (ENSBTAG00000013866)	ENSBTAG00000018987	RAB13 (ENSBTAG00000017604) #25	JTB (ENSBTAG00000014694)	CREB3L4 (ENSBTAG00000014692) #26	SLC39A1 (ENSBTAG00000011284) #27	CRTC2 (ENSBTAG00000017942) #28	DENND4B (ENSBTAG00000018711) #29	GATAD2B (ENSBTAG00000006678) #30	SLC27A3 (ENSBTAG00000021862)	INTS3 (ENSBTAG00000006235) #31
Bos_a	ANCESTRAL SPECIES	27	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a.m.b	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879.r #33
Domestic yak	MODERN SPECIES	22	PYGO2 (ENSBGRG00000009080)	PBXIP1 (ENSBGRG00000008978)	PMVK (ENSBGRG00000008918)	KCNN3 (ENSBGRG00000008715) #11	ENSBGRG00000008692	ADAR (ENSBGRG00000008643) #12	CHRNB2 (ENSBGRG00000008531) #13	UBE2Q1 (ENSBGRG00000008434) #15	TDRD10 (ENSBGRG00000008282)	SHE (ENSBGRG00000008191) #16	IL6R (ENSBGRG00000008129) #17	ATP8B2 (ENSBGRG00000007652) #18	ENSBGRG00000007543 #19	HAX1 (ENSBGRG00000007345) #20	UBAP2L (ENSBGRG00000011700) #21	C1orf43 (ENSBGRG00000010897) #22	CFAP141 (ENSBGRG00000010793)	ENSBGRG00000009632 #23	NUP210L (ENSBGRG00000008635) #24	ENSBGRG00000008529	RAB13 (ENSBGRG00000008324) #25	CREB3L4 (ENSBGRG00000008099) #26	JTB (ENSBGRG00000008039)	SLC39A1 (ENSBGRG00000008027) #27	CRTC2 (ENSBGRG00000007800) #28	DENND4B (ENSBGRG00000007443) #29	GATAD2B (ENSBGRG00000007224) #30	SLC27A3 (ENSBGRG00000007095)	INTS3 (ENSBGRG00000006876) #31	NPR1 (ENSBGRG00000006669) #32	ILF2 (ENSBGRG00000006500) #33
Wild yak	DUPLICATION
Wild yak	MODERN SPECIES	1060												ENSBMUG00000011422	ZFHX4 (ENSBMUG00000011394)	PEX2 (ENSBMUG00000011354)	ENSBMUG00000011337	ENSBMUG00000011330 #22	ENSBMUG00000011309
Wild yak	MODERN SPECIES	3125															UBAP2L (ENSBMUG00000009662) #21	C1orf43 (ENSBMUG00000009598) #22	CFAP141 (ENSBMUG00000009584)	ENSBMUG00000009573 #23
Caprinae	ANCESTRAL SPECIES	2	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a.m	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33
Rambouillet Sheep	MODERN SPECIES		CKS1B (ENSOARG00020002417)	SHC1 (ENSOARG00020002360)	PYGO2 (ENSOARG00020002329)	PBXIP1 (ENSOARG00020002298)	PMVK (ENSOARG00020002284)	KCNN3 (ENSOARG00020002194) #11	ADAR (ENSOARG00020002136) #12	CHRNB2 (ENSOARG00020002109) #13	UBE2Q1 (ENSOARG00020002036) #15	TDRD10 (ENSOARG00020002015)	SHE (ENSOARG00020001998) #16	IL6R (ENSOARG00020001913) #17	ATP8B2 (ENSOARG00020001800) #18	HAX1 (ENSOARG00020001735) #20	UBAP2L (ENSOARG00020001679) #21	C1orf43 (ENSOARG00020001551) #22	C1orf189 (ENSOARG00020001521)	ENSOARG00020001415 #23	ENSOARG00020001381 #24	ENSOARG00020001344 #24	ENSOARG00020001330	RAB13 (ENSOARG00020001322) #25	JTB (ENSOARG00020001313)	CREB3L4 (ENSOARG00020001282) #26	SLC39A1 (ENSOARG00020001266) #27	CRTC2 (ENSOARG00020001237) #28	DENND4B (ENSOARG00020001161) #29	GATAD2B (ENSOARG00020001112) #30	SLC27A3 (ENSOARG00020001089)	INTS3 (ENSOARG00020001042) #31	NPR1 (ENSOARG00020000995) #32
Goat	DUPLICATION
Goat	MODERN SPECIES	5	ENSCHIG00000015884	UBE2W (ENSCHIG00000025248)	ELOC (ENSCHIG00000015198)	TMEM70 (ENSCHIG00000019890)	LY96 (ENSCHIG00000012530)	ENSCHIG00000017122	JPH1 (ENSCHIG00000017967)	GDAP1 (ENSCHIG00000006756)	PI15 (ENSCHIG00000016089)	CRISPLD1 (ENSCHIG00000016652)	HNF4G (ENSCHIG00000001150)	ENSCHIG00000020169	ZFHX4 (ENSCHIG00000017123)	PEX2 (ENSCHIG00000011681)	ENSCHIG00000024972	ENSCHIG00000012572 #22	ENSCHIG00000017797	ENSCHIG00000026486	PKIA (ENSCHIG00000022780)	ZC2HC1A (ENSCHIG00000022396)	IL7 (ENSCHIG00000013214)	ENSCHIG00000022803	STMN2 (ENSCHIG00000014257)	HEY1 (ENSCHIG00000021515)	MRPS28 (ENSCHIG00000018727)	TPD52 (ENSCHIG00000016090)	ZBTB10 (ENSCHIG00000008950)	ZNF704 (ENSCHIG00000009329)	PAG1 (ENSCHIG00000005882)	ENSCHIG00000022058	PMP2 (ENSCHIG00000017466)
Goat	MODERN SPECIES	22	SHC1 (ENSCHIG00000012851)	PYGO2 (ENSCHIG00000022839)	PBXIP1 (ENSCHIG00000012689)	PMVK (ENSCHIG00000024473)	KCNN3 (ENSCHIG00000018342) #11	ADAR (ENSCHIG00000017156) #12	CHRNB2 (ENSCHIG00000019561) #13	UBE2Q1 (ENSCHIG00000012187) #15	TDRD10 (ENSCHIG00000022402)	SHE (ENSCHIG00000012737) #16	IL6R (ENSCHIG00000012394) #17	ATP8B2 (ENSCHIG00000019010) #18	AQP10 (ENSCHIG00000023807) #19	HAX1 (ENSCHIG00000019434) #20	UBAP2L (ENSCHIG00000021701) #21	C1orf43 (ENSCHIG00000021619) #22	CFAP141 (ENSCHIG00000013219)	TPM3 (ENSCHIG00000017467) ##23	NUP210L (ENSCHIG00000022403) #24	ENSCHIG00000009267	RAB13 (ENSCHIG00000022271) #25	JTB (ENSCHIG00000021425)	CREB3L4 (ENSCHIG00000025478) #26	SLC39A1 (ENSCHIG00000011794) #27	CRTC2 (ENSCHIG00000023157) #28	DENND4B (ENSCHIG00000007112) #29	GATAD2B (ENSCHIG00000017439) #30	SLC27A3 (ENSCHIG00000022587)	INTS3 (ENSCHIG00000025770) #31	NPR1 (ENSCHIG00000023233) #32	ILF2 (ENSCHIG00000012048) #33
Cetacea	ANCESTRAL SPECIES		ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00390000013048.q.b.a	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32
Blue whale	MODERN SPECIES		SHC1 (ENSBMSG00010001723)	PYGO2 (ENSBMSG00010001688)	PBXIP1 (ENSBMSG00010001670)	PMVK (ENSBMSG00010001656)	ENSBMSG00010001645	KCNN3 (ENSBMSG00010001548) #11	ADAR (ENSBMSG00010001486) #12	CHRNB2 (ENSBMSG00010001445) #13	UBE2Q1 (ENSBMSG00010001421) #15	TDRD10 (ENSBMSG00010001396)	SHE (ENSBMSG00010001369) #16	IL6R (ENSBMSG00010001340) #17	ATP8B2 (ENSBMSG00010001256) #18	HAX1 (ENSBMSG00010001181) #20	UBAP2L (ENSBMSG00010001118) #21	C1orf43 (ENSBMSG00010001037) #22	CFAP141 (ENSBMSG00010001003)	ENSBMSG00010000802 #23	ENSBMSG00010000723	NUP210L (ENSBMSG00010000522) #24	ENSBMSG00010000421	RAB13 (ENSBMSG00010000407) #25	ENSBMSG00010000380	CREB3L4 (ENSBMSG00010000333) #26	SLC39A1 (ENSBMSG00010000296) #27	CRTC2 (ENSBMSG00010000243) #28	DENND4B (ENSBMSG00010000188) #29	GATAD2B (ENSBMSG00010000167) #30	SLC27A3 (ENSBMSG00010000118)	INTS3 (ENSBMSG00010000047) #31	ENSBMSG00010019487
Odontoceti	ANCESTRAL SPECIES		ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00390000013048.q.b.a	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32
Sperm whale	MODERN SPECIES	15	SYT11 (ENSPCTG00005011179)	GON4L (ENSPCTG00005011256)	MSTO1 (ENSPCTG00005011784)	DAP3 (ENSPCTG00005011863)	ASH1L (ENSPCTG00005012095)	KCNN3 (ENSPCTG00005012225) #11	ADAR (ENSPCTG00005012266) #12	SHC1 (ENSPCTG00005012451)	PBXIP1 (ENSPCTG00005012606)	EFNA3 (ENSPCTG00005012694)	TDRD10 (ENSPCTG00005012748)	SHE (ENSPCTG00005012880) #16	IL6R (ENSPCTG00005012978) #17	HAX1 (ENSPCTG00005013017) #20	UBAP2L (ENSPCTG00005013404) #21	C4H1orf43 (ENSPCTG00005014264) #22	CFAP141 (ENSPCTG00005014779)	TPM3 (ENSPCTG00005014890) #23	ENSPCTG00005015382 ##23	NUP210L (ENSPCTG00005015439) #24	NPR1 (ENSPCTG00005015896) #32	INTS3 (ENSPCTG00005016167) #31	SLC27A3 (ENSPCTG00005016261)	GATAD2B (ENSPCTG00005016424) #30	ENSPCTG00005016521	S100A8 (ENSPCTG00005016557)	S100A12 (ENSPCTG00005016598)	S100A9 (ENSPCTG00005016642)	ENSPCTG00005016678	ENSPCTG00005016724	ENSPCTG00005016816
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00390000013048.q.b.a	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32
Dolphin	MODERN SPECIES	2664												ATP8B2 (ENSTTRG00000015867) #18	AQP10 (ENSTTRG00000015864) #19	HAX1 (ENSTTRG00000015855) #20	UBAP2L (ENSTTRG00000015830) #21	C1orf43 (ENSTTRG00000015824) #22	CFAP141 (ENSTTRG00000015819)	TPM3 (ENSTTRG00000015810) ##23	NUP210L (ENSTTRG00000015783) #24
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00390000013048.q.b.a	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a.i	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32
Monodontidae	ANCESTRAL SPECIES		ENSGT00950000182971.B.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.b.b	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32
Beluga whale	MODERN SPECIES	69	CKS1B (ENSDLEG00000010640)	SHC1 (ENSDLEG00000010555)	PYGO2 (ENSDLEG00000010536)	PBXIP1 (ENSDLEG00000010500)	PMVK (ENSDLEG00000010484)	KCNN3 (ENSDLEG00000010451) #11	ADAR (ENSDLEG00000010404) #12	CHRNB2 (ENSDLEG00000010379) #13	UBE2Q1 (ENSDLEG00000010348) #15	TDRD10 (ENSDLEG00000010306)	SHE (ENSDLEG00000010284) #16	IL6R (ENSDLEG00000010263) #17	ATP8B2 (ENSDLEG00000010077) #18	HAX1 (ENSDLEG00000010033) #20	UBAP2L (ENSDLEG00000009936) #21	CUNH1orf43 (ENSDLEG00000009912) #22	CFAP141 (ENSDLEG00000009884)	ENSDLEG00000009864 #23	TPM3 (ENSDLEG00000009786) ##23	NUP210L (ENSDLEG00000008115) #24	ENSDLEG00000007980	RAB13 (ENSDLEG00000007961) #25	JTB (ENSDLEG00000007934)	ENSDLEG00000011053 #26	SLC39A1 (ENSDLEG00000011047) #27	CRTC2 (ENSDLEG00000010750) #28	DENND4B (ENSDLEG00000010669) #29	GATAD2B (ENSDLEG00000010639) #30	SLC27A3 (ENSDLEG00000010561)	INTS3 (ENSDLEG00000010414) #31	NPR1 (ENSDLEG00000010307) #32
Narwhal	MODERN SPECIES	304	CKS1B (ENSMMNG00015013814)	SHC1 (ENSMMNG00015013834)	PYGO2 (ENSMMNG00015013864)	PBXIP1 (ENSMMNG00015013877)	PMVK (ENSMMNG00015013887)	KCNN3 (ENSMMNG00015013903) #11	ADAR (ENSMMNG00015013922) #12	CHRNB2 (ENSMMNG00015013953) #13	UBE2Q1 (ENSMMNG00015013965) #15	TDRD10 (ENSMMNG00015013995)	ENSMMNG00015014006 #16	IL6R (ENSMMNG00015014021) #17	ATP8B2 (ENSMMNG00015014073) #18	HAX1 (ENSMMNG00015014148) #20	UBAP2L (ENSMMNG00015014236) #21	C1orf43 (ENSMMNG00015014459) #22	CFAP141 (ENSMMNG00015014508)	ENSMMNG00015000249 #23	NUP210L (ENSMMNG00015000593) #24	ENSMMNG00015000867	RAB13 (ENSMMNG00015000895) #25	JTB (ENSMMNG00015000950)	CREB3L4 (ENSMMNG00015001002) #26	SLC39A1 (ENSMMNG00015001047) #27	CRTC2 (ENSMMNG00015001079) #28	DENND4B (ENSMMNG00015001160) #29	GATAD2B (ENSMMNG00015001287) #30	SLC27A3 (ENSMMNG00015001407)	INTS3 (ENSMMNG00015001446) #31	NPR1 (ENSMMNG00015001549) #32	ILF2 (ENSMMNG00015001680) #33
Vaquita	MODERN SPECIES		PYGO2 (ENSPSNG00000003370)	PBXIP1 (ENSPSNG00000003349)	PMVK (ENSPSNG00000003319)	ENSPSNG00000003302	KCNN3 (ENSPSNG00000003267) #11	ADAR (ENSPSNG00000003228) #12	CHRNB2 (ENSPSNG00000003203) #13	UBE2Q1 (ENSPSNG00000003187) #15	TDRD10 (ENSPSNG00000003151)	ENSPSNG00000003135 #16	IL6R (ENSPSNG00000003115) #17	ENSPSNG00000003073 #18	ENSPSNG00000003045 #18	AQP10 (ENSPSNG00000003017) #19	UBAP2L (ENSPSNG00000002900) #21	C1orf43 (ENSPSNG00000002677) #22	CFAP141 (ENSPSNG00000002637)	ENSPSNG00000002548 #23	NUP210L (ENSPSNG00000002274) #24	RPS27 (ENSPSNG00000002137)	RAB13 (ENSPSNG00000002114) #25	JTB (ENSPSNG00000002085)	CREB3L4 (ENSPSNG00000002049) #26	SLC39A1 (ENSPSNG00000002032) #27	CRTC2 (ENSPSNG00000001957) #28	DENND4B (ENSPSNG00000001848) #29	GATAD2B (ENSPSNG00000001801) #30	INTS3 (ENSPSNG00000001667) #31	NPR1 (ENSPSNG00000001588) #32	ILF2 (ENSPSNG00000001548) #33	SNAPIN (ENSPSNG00000001522) #34
Suina	ANCESTRAL SPECIES	8	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a	ENSGT00940000162147	ENSGT00390000014801	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #15	ENSGT00390000006620	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #24	ENSGT00950000182891.a.a.b.a.b.a	ENSGT00940000159989 #25	ENSGT00390000016136	ENSGT00940000160806 #26	ENSGT00940000157062 #27	ENSGT00390000010652.B #28	ENSGT00940000160472 #29	ENSGT00390000004097.b #30	ENSGT00940000161073	ENSGT00390000014184 #31	ENSGT00940000156223 #32	ENSGT00940000154879 #33
Chacoan peccary	MODERN SPECIES	29	PYGO2 (ENSCWAG00000001036)	PBXIP1 (ENSCWAG00000001057)	PMVK (ENSCWAG00000001096)	KCNN3 (ENSCWAG00000001145) #11	ENSCWAG00000001236	ADAR (ENSCWAG00000001258) #12	CHRNB2 (ENSCWAG00000001310) #13	UBE2Q1 (ENSCWAG00000001337) #15	TDRD10 (ENSCWAG00000001366)	SHE (ENSCWAG00000001404) #16	IL6R (ENSCWAG00000001430) #17	ATP8B2 (ENSCWAG00000001478) #18	AQP10 (ENSCWAG00000001546) #19	HAX1 (ENSCWAG00000001569) #20	UBAP2L (ENSCWAG00000001612) #21	C1orf43 (ENSCWAG00000001744) #22	ENSCWAG00000001872 #23	NUP210L (ENSCWAG00000002171) #24	ENSCWAG00000002378	RAB13 (ENSCWAG00000002389) #25	JTB (ENSCWAG00000002408)	CREB3L4 (ENSCWAG00000002425) #26	SLC39A1 (ENSCWAG00000002450) #27	CRTC2 (ENSCWAG00000002471) #28	DENND4B (ENSCWAG00000002504) #29	GATAD2B (ENSCWAG00000002524) #30	SLC27A3 (ENSCWAG00000002554)	INTS3 (ENSCWAG00000002571) #31	NPR1 (ENSCWAG00000002631) #32	ILF2 (ENSCWAG00000002649) #33	SNAPIN (ENSCWAG00000002674) #34
Pig	MODERN SPECIES	12	CKS1B (ENSSSCG00000054923)	PBXIP1 (ENSSSCG00000006540)	PMVK (ENSSSCG00000055689)	KCNN3 (ENSSSCG00000006542) #11	ENSSSCG00000033749	ADAR (ENSSSCG00000006543) #12	CHRNB2 (ENSSSCG00000006545) #13	UBE2Q1 (ENSSSCG00000006544) #15	TDRD10 (ENSSSCG00000006546)	SHE (ENSSSCG00000006547) #16	IL6R (ENSSSCG00000027628) #17	ATP8B2 (ENSSSCG00000006550) #18	AQP10 (ENSSSCG00000006551) #19	HAX1 (ENSSSCG00000006552) #20	UBAP2L (ENSSSCG00000006553) #21	C1orf43 (ENSSSCG00000006554) #22	CFAP141 (ENSSSCG00000006555)	ENSSSCG00000006556 #23	NUP210L (ENSSSCG00000038125) #24	RPS27 (ENSSSCG00000031838)	RAB13 (ENSSSCG00000006564) #25	ENSSSCG00000006559	CREB3L4 (ENSSSCG00000006560) #26	SLC39A1 (ENSSSCG00000006561) #27	CRTC2 (ENSSSCG00000006567) #28	DENND4B (ENSSSCG00000006568) #29	GATAD2B (ENSSSCG00000006562) #30	ENSSSCG00000053251	SLC27A3 (ENSSSCG00000006569)	ENSSSCG00000043560	INTS3 (ENSSSCG00000006571) #31