Euarchontoglires	ANCESTRAL SPECIES		ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35
Primates	ANCESTRAL SPECIES	7	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35	ENSGT00940000156223
Haplorrhini	ANCESTRAL SPECIES	7	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35	ENSGT00940000156223
Simiiformes	ANCESTRAL SPECIES	8	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35	ENSGT00940000156223
Catarrhini	ANCESTRAL SPECIES	10	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00910000147245	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00390000014682.u.b	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00950000182920.b.a.b.a.b.j	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35
Cercopithecidae	ANCESTRAL SPECIES	22	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00910000147245	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00390000014682.u.b	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s ##26	ENSGT00940000159989.g #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00950000182920.b.a.b.a.b.j	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00910000147245	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00390000014682.u.b	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s ##26	ENSGT00940000159989.g #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062.k #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00950000182920.b.a.b.a.b.j	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00910000147660	ENSGT00940000158417.b #13	ENSGT00910000147245	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00390000014682.u.b	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s ##26	ENSGT00940000159989.g #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062.k #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00950000182920.b.a.b.a.b.j.a	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36
Macaca	ANCESTRAL SPECIES		ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00910000147660	ENSGT00940000158417.b #13	ENSGT00910000147245	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00390000014682.u.b	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s ##26	ENSGT00940000159989.g #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062.k #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00950000182920.b.a.b.a.b.j.a	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35
Macaca_a	ANCESTRAL SPECIES		ENSGT00950000182870.a.a.b.j	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s ##26	ENSGT00940000159989.g #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062.k #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35	ENSGT00940000156223
Crab-eating macaque	MODERN SPECIES		PYGO2 (ENSMFAG00000045066) #7	ENSMFAG00000061019 #8	ENSMFAG00000039855 #9	PMVK (ENSMFAG00000032448) #10	KCNN3 (ENSMFAG00000040110) #11	ADAR (ENSMFAG00000003217) #12	CHRNB2 (ENSMFAG00000048751) #13	UBE2Q1 (ENSMFAG00000064720) #14	TDRD10 (ENSMFAG00000037009) #15	SHE (ENSMFAG00000032320) #16	IL6R (ENSMFAG00000038621) #17	ATP8B2 (ENSMFAG00000025147) #18	AQP10 (ENSMFAG00000004122) #19	HAX1 (ENSMFAG00000036731) #20	UBAP2L (ENSMFAG00000033622) #21	C1orf43 (ENSMFAG00000033673) #22	ENSMFAG00000034487 #23	ENSMFAG00000057974 #24	NUP210L (ENSMFAG00000036694) #25	ENSMFAG00000036388 #26	RAB13 (ENSMFAG00000041018) #27	JTB (ENSMFAG00000042455) #28	CREB3L4 (ENSMFAG00000030893) #29	ENSMFAG00000036171 #30	CRTC2 (ENSMFAG00000046150) #31	DENND4B (ENSMFAG00000037492) #32	GATAD2B (ENSMFAG00000042345) #33	SLC27A3 (ENSMFAG00000042386) #34	INTS3 (ENSMFAG00000008338) #35	ENSMFAG00000035099 #36	ENSMFAG00000054004 #37
Rhesus	MODERN SPECIES		SHC1 (ENSMMUG00000006581)	PYGO2 (ENSMMUG00000006579) #7	PBXIP1 (ENSMMUG00000006576)	PMVK (ENSMMUG00000052450) #10	KCNN3 (ENSMMUG00000017793) #11	ADAR (ENSMMUG00000016093) #12	CHRNB2 (ENSMMUG00000016089) #13	UBE2Q1 (ENSMMUG00000019547) #14	TDRD10 (ENSMMUG00000019545) #15	SHE (ENSMMUG00000022980) #16	IL6R (ENSMMUG00000022978) #17	ATP8B2 (ENSMMUG00000023364) #18	AQP10 (ENSMMUG00000023363) #19	HAX1 (ENSMMUG00000010814) #20	UBAP2L (ENSMMUG00000010810) #21	C1H1orf43 (ENSMMUG00000010808) #22	TPM3 (ENSMMUG00000010805) ##23	NUP210L (ENSMMUG00000014952) #25	RPS27 (ENSMMUG00000018240) ##26	RAB13 (ENSMMUG00000017586) #27	CREB3L4 (ENSMMUG00000005008) #29	JTB (ENSMMUG00000005010) #28	SLC39A1 (ENSMMUG00000005007) #30	CRTC2 (ENSMMUG00000005005) #31	DENND4B (ENSMMUG00000005002) #32	GATAD2B (ENSMMUG00000002696) #33	ENSMMUG00000049388 ##37	SLC27A3 (ENSMMUG00000019487) #34	INTS3 (ENSMMUG00000019482) #35	ENSMMUG00000044696 #36	NPR1 (ENSMMUG00000008153)
Pig-tailed macaque	MODERN SPECIES	262	PMVK (ENSMNEG00000020431) #10	KCNN3 (ENSMNEG00000043088) #11	ENSMNEG00000037087	ADAR (ENSMNEG00000031204) #12	CHRNB2 (ENSMNEG00000029486) #13	ENSMNEG00000045004	UBE2Q1 (ENSMNEG00000031143) #14	TDRD10 (ENSMNEG00000044137) #15	SHE (ENSMNEG00000043363) #16	ENSMNEG00000029467	IL6R (ENSMNEG00000044637) #17	ATP8B2 (ENSMNEG00000037311) #18	AQP10 (ENSMNEG00000041320) #19	HAX1 (ENSMNEG00000041953) #20	UBAP2L (ENSMNEG00000032192) #21	C1orf43 (ENSMNEG00000040260) #22	CFAP141 (ENSMNEG00000036051)	TPM3 (ENSMNEG00000034023) ##23	NUP210L (ENSMNEG00000030106) #25	RPS27 (ENSMNEG00000029459) ##26	ENSMNEG00000028951 #27	JTB (ENSMNEG00000027313) #28	CREB3L4 (ENSMNEG00000042788) #29	ENSMNEG00000033731 #30	CRTC2 (ENSMNEG00000033388) #31	DENND4B (ENSMNEG00000044525) #32	ENSMNEG00000029449	GATAD2B (ENSMNEG00000029141) #33	SLC27A3 (ENSMNEG00000044807) #34	ENSMNEG00000038653 #36	INTS3 (ENSMNEG00000042397) #35
Cercopithecinae_b	ANCESTRAL SPECIES	3	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00910000147660	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00390000014682.u.b	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000014471.j	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s ##26	ENSGT00940000159989.g #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062.k #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00950000182920.b.a.b.a.b.j.a	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36
Olive baboon	MODERN SPECIES		PBXIP1 (ENSPANG00000005125)	PMVK (ENSPANG00000041925) #10	KCNN3 (ENSPANG00000003114) #11	ADAR (ENSPANG00000008380) #12	CHRNB2 (ENSPANG00000011610) #13	UBE2Q1 (ENSPANG00000016454) #14	TDRD10 (ENSPANG00000023014) #15	SHE (ENSPANG00000022418) #16	IL6R (ENSPANG00000003884) #17	ENSPANG00000040683 #21	ENSPANG00000050990 #20	AQP10 (ENSPANG00000014081) #19	ATP8B2 (ENSPANG00000015836) #18	ENSPANG00000011611 #20	ENSPANG00000042713 #21	C1orf43 (ENSPANG00000021847) #22	CFAP141 (ENSPANG00000003885)	ENSPANG00000032917 #23	ENSPANG00000041581	NUP210L (ENSPANG00000001760) #25	RPS27 (ENSPANG00000034821) ##26	RAB13 (ENSPANG00000004479) #27	JTB (ENSPANG00000008316) #28	CREB3L4 (ENSPANG00000006363) #29	ENSPANG00000032614 #30	CRTC2 (ENSPANG00000014082) #31	DENND4B (ENSPANG00000003886) #32	GATAD2B (ENSPANG00000008972) #33	SLC27A3 (ENSPANG00000046183) #34	INTS3 (ENSPANG00000016455) #35	NPR1 (ENSPANG00000021848)
Cercopithecinae_d	ANCESTRAL SPECIES	29	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00910000147660	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00390000014682.u.b	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000014471.j	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.b.b.o #26	ENSGT00940000159989.g #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062.k #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00950000182920.b.a.b.a.b.j.a	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36
Drill	MODERN SPECIES	1343														HAX1 (ENSMLEG00000040818) #20	UBAP2L (ENSMLEG00000011898) #21	C1orf43 (ENSMLEG00000038029) #22	CFAP141 (ENSMLEG00000033358)	ENSMLEG00000040828 #23	ENSMLEG00000029821	NUP210L (ENSMLEG00000012290) #25	ENSMLEG00000033189 #26	ENSMLEG00000042247 #27	JTB (ENSMLEG00000041352) #28	CREB3L4 (ENSMLEG00000031038) #29	SLC39A1 (ENSMLEG00000030110) ##30	CRTC2 (ENSMLEG00000032677) #31	DENND4B (ENSMLEG00000008709) #32	ENSMLEG00000031465	GATAD2B (ENSMLEG00000039050) #33	SLC27A3 (ENSMLEG00000040089) #34	ENSMLEG00000044217 #36
Sooty mangabey	MODERN SPECIES	205	PYGO2 (ENSCATG00000033654) #7	PBXIP1 (ENSCATG00000038165)	PMVK (ENSCATG00000043628) #10	KCNN3 (ENSCATG00000036490) #11	ADAR (ENSCATG00000028528) #12	CHRNB2 (ENSCATG00000012048) #13	UBE2Q1 (ENSCATG00000035948) #14	TDRD10 (ENSCATG00000039790) #15	SHE (ENSCATG00000032686) #16	ENSCATG00000029642	IL6R (ENSCATG00000043994) #17	ATP8B2 (ENSCATG00000041069) #18	AQP10 (ENSCATG00000031636) #19	HAX1 (ENSCATG00000036999) #20	UBAP2L (ENSCATG00000042469) #21	C1orf43 (ENSCATG00000030081) #22	CFAP141 (ENSCATG00000033844)	ENSCATG00000040648 #23	ENSCATG00000031235	NUP210L (ENSCATG00000038338) #25	ENSCATG00000044914 ##26	RAB13 (ENSCATG00000041779) #27	JTB (ENSCATG00000031036) #28	CREB3L4 (ENSCATG00000029955) #29	ENSCATG00000032701 #30	CRTC2 (ENSCATG00000037310) #31	DENND4B (ENSCATG00000030387) #32	ENSCATG00000043570	GATAD2B (ENSCATG00000022684) #33	SLC27A3 (ENSCATG00000044857) #34	ENSCATG00000044151 #36
Vervet Monkey	DUPLICATION
Vervet Monkey	MODERN SPECIES	12	SHC1 (ENSCSAG00000001975)	PYGO2 (ENSCSAG00000001971) #7	PBXIP1 (ENSCSAG00000001968)	PMVK (ENSCSAG00000001966) #10	KCNN3 (ENSCSAG00000001965) #11	ADAR (ENSCSAG00000001964) #12	CHRNB2 (ENSCSAG00000001961) #13	UBE2Q1 (ENSCSAG00000001959) #14	TDRD10 (ENSCSAG00000001953) #15	SHE (ENSCSAG00000001949) #16	IL6R (ENSCSAG00000001948) #17	ATP8B2 (ENSCSAG00000001941) #18	AQP10 (ENSCSAG00000001936) #19	HAX1 (ENSCSAG00000001933) #20	UBAP2L (ENSCSAG00000001929) #21	ENSCSAG00000001924 #22	CFAP141 (ENSCSAG00000001919)	TPM3 (ENSCSAG00000001917) ##23	NUP210L (ENSCSAG00000001910) #25	ENSCSAG00000001902 ##26	JTB (ENSCSAG00000001901) #28	RAB13 (ENSCSAG00000001898) #27	CREB3L4 (ENSCSAG00000001896) #29	SLC39A1 (ENSCSAG00000001894) #30	CRTC2 (ENSCSAG00000001893) #31	DENND4B (ENSCSAG00000001886) #32	GATAD2B (ENSCSAG00000001881) #33	SLC27A3 (ENSCSAG00000001878) #34	INTS3 (ENSCSAG00000001872) #35	NPR1 (ENSCSAG00000001869)	ENSCSAG00000001866
Vervet Monkey	MODERN SPECIES	2	CPM (ENSCSAG00000004238)	CPSF6 (ENSCSAG00000004232)	LYZ (ENSCSAG00000004225)	YEATS4 (ENSCSAG00000004221)	FRS2 (ENSCSAG00000004214)	CCT2 (ENSCSAG00000004209)	LRRC10 (ENSCSAG00000018905)	BEST3 (ENSCSAG00000004199)	RAB3IP (ENSCSAG00000004189)	ENSCSAG00000004183	CNOT2 (ENSCSAG00000004177)	KCNMB4 (ENSCSAG00000004174)	PTPRB (ENSCSAG00000004172)	PTPRR (ENSCSAG00000004155)	TSPAN8 (ENSCSAG00000004135)	ENSCSAG00000004130 #22	LGR5 (ENSCSAG00000004119)	ZFC3H1 (ENSCSAG00000004100)	THAP2 (ENSCSAG00000004092)	TMEM19 (ENSCSAG00000004088)	RAB21 (ENSCSAG00000004081)	TBC1D15 (ENSCSAG00000004078)	TRHDE (ENSCSAG00000004072)	ATXN7L3B (ENSCSAG00000018907)	KCNC2 (ENSCSAG00000004064)	CAPS2 (ENSCSAG00000004056)	GLIPR1L1 (ENSCSAG00000004045)	GLIPR1L2 (ENSCSAG00000004041)	GLIPR1 (ENSCSAG00000004038)	KRR1 (ENSCSAG00000004034)	ENSCSAG00000018909
Rhinopithecus	ANCESTRAL SPECIES	43	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243.v #12	ENSGT00940000157243.u #12	ENSGT00940000158417.b #13	ENSGT00910000147245	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00390000014682.u.b	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s ##26	ENSGT00950000182891.a.a.b.a.b.b.a.b ##26	ENSGT00940000159989.g #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00950000182920.b.a.b.a.b.j	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36
Golden snub-nosed monkey	MODERN SPECIES	1183	PBXIP1 (ENSRROG00000043067)	PMVK (ENSRROG00000036580) #10	KCNN3 (ENSRROG00000045093) #11	ADAR (ENSRROG00000033822) #12	CHRNB2 (ENSRROG00000033819) #13	ENSRROG00000032137	UBE2Q1 (ENSRROG00000036149) #14	TDRD10 (ENSRROG00000041498) #15	SHE (ENSRROG00000040424) #16	IL6R (ENSRROG00000037064) #17	ENSRROG00000034176	ATP8B2 (ENSRROG00000028829) #18	AQP10 (ENSRROG00000038831) #19	HAX1 (ENSRROG00000044702) #20	UBAP2L (ENSRROG00000035204) #21	C1orf43 (ENSRROG00000025641) #22	CFAP141 (ENSRROG00000044122)	ENSRROG00000030286 #23	NUP210L (ENSRROG00000036739) #25	ENSRROG00000033349 ##26	RAB13 (ENSRROG00000036885) #27	JTB (ENSRROG00000040927) #28	CREB3L4 (ENSRROG00000013856) #29	SLC39A1 (ENSRROG00000037537) #30	CRTC2 (ENSRROG00000038896) #31	DENND4B (ENSRROG00000035662) #32	ENSRROG00000029949	GATAD2B (ENSRROG00000029454) #33	SLC27A3 (ENSRROG00000044338) #34	INTS3 (ENSRROG00000032561) #35	ENSRROG00000033474 #36
Black snub-nosed monkey	MODERN SPECIES	156																C1orf43 (ENSRBIG00000033263) #22	CFAP141 (ENSRBIG00000035273)	TPM3 (ENSRBIG00000032904) ##23
Hominoidea	ANCESTRAL SPECIES	7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00910000147245	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00390000014682.u.b	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00950000182920.b.a.b.a.b.j	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35
Gibbon	MODERN SPECIES	2	PBXIP1 (ENSNLEG00000011504)	PMVK (ENSNLEG00000011489) #10	KCNN3 (ENSNLEG00000011487) #11	ADAR (ENSNLEG00000011458) #12	ENSNLEG00000011453 #13	ENSNLEG00000035677	UBE2Q1 (ENSNLEG00000011385) #14	TDRD10 (ENSNLEG00000011370) #15	SHE (ENSNLEG00000011358) #16	IL6R (ENSNLEG00000033170) #17	ENSNLEG00000029459	ATP8B2 (ENSNLEG00000011314) #18	AQP10 (ENSNLEG00000011305) #19	HAX1 (ENSNLEG00000011290) #20	UBAP2L (ENSNLEG00000011172) #21	C1orf43 (ENSNLEG00000031408) #22	CFAP141 (ENSNLEG00000027442)	ENSNLEG00000031965 #23	NUP210L (ENSNLEG00000010922) #25	ENSNLEG00000033257 #26	RAB13 (ENSNLEG00000028944) #27	JTB (ENSNLEG00000030030) #28	CREB3L4 (ENSNLEG00000010798) #29	SLC39A1 (ENSNLEG00000010768) #30	CRTC2 (ENSNLEG00000010708) #31	DENND4B (ENSNLEG00000010604) #32	ENSNLEG00000032924	GATAD2B (ENSNLEG00000010649) #33	ENSNLEG00000010644 #34	INTS3 (ENSNLEG00000010578) #35	NPR1 (ENSNLEG00000010560)
Hominidae	ANCESTRAL SPECIES	6	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00910000147245	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00390000014682.u.b	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00950000182920.b.a.b.a.b.j	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	6	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00910000147245	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00390000014682.u.b	ENSGT00940000161919 #17	ENSGT00950000183099.u.a.e.i.b.a.a.a	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s.d ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00950000182920.b.a.b.a.b.j	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35
Homo/Pan group	ANCESTRAL SPECIES	7	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00910000147245	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00390000014682.u.b	ENSGT00940000161919 #17	ENSGT00950000183099.u.a.e.i.b.a.a.a	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s.d ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00950000182920.b.a.b.a.b.j	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35
Pan	ANCESTRAL SPECIES		ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00910000147245	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00390000014682.u.b	ENSGT00940000161919 #17	ENSGT00950000183099.u.a.e.i.b.a.a.a	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.e #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s.d ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00950000182920.b.a.b.a.b.j	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35
Bonobo	MODERN SPECIES		PMVK (ENSPPAG00000041579) #10	KCNN3 (ENSPPAG00000039456) #11	ENSPPAG00000032031 #12	CHRNB2 (ENSPPAG00000031821) #13	ENSPPAG00000027726	UBE2Q1 (ENSPPAG00000031407) #14	TDRD10 (ENSPPAG00000025622) #15	SHE (ENSPPAG00000030773) #16	ENSPPAG00000028410	IL6R (ENSPPAG00000029063) #17	ENSPPAG00000030902	ATP8B2 (ENSPPAG00000034141) #18	AQP10 (ENSPPAG00000034579) #19	HAX1 (ENSPPAG00000028539) #20	UBAP2L (ENSPPAG00000013173) #21	ENSPPAG00000037317 #22	CFAP141 (ENSPPAG00000035012)	ENSPPAG00000034824 #23	NUP210L (ENSPPAG00000024740) #25	RPS27 (ENSPPAG00000042044) ##26	RAB13 (ENSPPAG00000028435) #27	JTB (ENSPPAG00000028370) #28	CREB3L4 (ENSPPAG00000021279) #29	SLC39A1 (ENSPPAG00000042626) #30	CRTC2 (ENSPPAG00000031646) #31	DENND4B (ENSPPAG00000005709) #32	ENSPPAG00000038251	GATAD2B (ENSPPAG00000039339) #33	SLC27A3 (ENSPPAG00000021818) #34	ENSPPAG00000008757 #36	INTS3 (ENSPPAG00000034436) #35
Chimpanzee	MODERN SPECIES		PMVK (ENSPTRG00000001393) #10	KCNN3 (ENSPTRG00000001392) #11	ADAR (ENSPTRG00000022833) #12	CHRNB2 (ENSPTRG00000001389) #13	ENSPTRG00000043852	UBE2Q1 (ENSPTRG00000001387) #14	TDRD10 (ENSPTRG00000001386) #15	SHE (ENSPTRG00000001385) #16	ENSPTRG00000047720	IL6R (ENSPTRG00000001383) #17	ENSPTRG00000045345	ATP8B2 (ENSPTRG00000001382) #18	AQP10 (ENSPTRG00000001381) #19	HAX1 (ENSPTRG00000001380) #20	UBAP2L (ENSPTRG00000001379) #21	C1H1orf43 (ENSPTRG00000001378) #22	CFAP141 (ENSPTRG00000001377)	TPM3 (ENSPTRG00000001375) #23	NUP210L (ENSPTRG00000001372) #25	RPS27 (ENSPTRG00000001371) ##26	RAB13 (ENSPTRG00000001370) #27	JTB (ENSPTRG00000001369) #28	CREB3L4 (ENSPTRG00000001368) #29	SLC39A1 (ENSPTRG00000001367) #30	CRTC2 (ENSPTRG00000001366) #31	DENND4B (ENSPTRG00000001365) #32	ENSPTRG00000046146	GATAD2B (ENSPTRG00000001364) #33	SLC27A3 (ENSPTRG00000001362) #34	ENSPTRG00000041894 #36	INTS3 (ENSPTRG00000001360) #35
Human	MODERN SPECIES		SHC1 (ENSG00000160691)	PYGO2 (ENSG00000163348) #7	PBXIP1 (ENSG00000163346)	PMVK (ENSG00000163344) #10	KCNN3 (ENSG00000143603) #11	ADAR (ENSG00000160710) #12	CHRNB2 (ENSG00000160716) #13	UBE2Q1 (ENSG00000160714) #14	TDRD10 (ENSG00000163239) #15	SHE (ENSG00000169291) #16	IL6R (ENSG00000160712) #17	ATP8B2 (ENSG00000143515) #18	AQP10 (ENSG00000143595) #19	HAX1 (ENSG00000143575) #20	UBAP2L (ENSG00000143569) #21	C1orf43 (ENSG00000143612) #22	CFAP141 (ENSG00000163263)	TPM3 (ENSG00000143549) ##23	NUP210L (ENSG00000143552) #25	RPS27 (ENSG00000177954) ##26	RAB13 (ENSG00000143545) #27	JTB (ENSG00000143543) #28	CREB3L4 (ENSG00000143578) #29	SLC39A1 (ENSG00000143570) #30	CRTC2 (ENSG00000160741) #31	DENND4B (ENSG00000198837) #32	GATAD2B (ENSG00000143614) #33	SLC27A3 (ENSG00000143554) #34	INTS3 (ENSG00000143624) #35	NPR1 (ENSG00000169418)	ILF2 (ENSG00000143621)
Gorilla	MODERN SPECIES		PMVK (ENSGGOG00000012840) #10	KCNN3 (ENSGGOG00000012827) #11	ADAR (ENSGGOG00000007156) #12	CHRNB2 (ENSGGOG00000007153) #13	ENSGGOG00000037432	UBE2Q1 (ENSGGOG00000005627) #14	TDRD10 (ENSGGOG00000040815) #15	SHE (ENSGGOG00000015778) #16	ENSGGOG00000024279	IL6R (ENSGGOG00000000836) #17	RPSA (ENSGGOG00000024381)	ATP8B2 (ENSGGOG00000011901) #18	AQP10 (ENSGGOG00000011888) #19	HAX1 (ENSGGOG00000016771) #20	UBAP2L (ENSGGOG00000016753) #21	C1orf43 (ENSGGOG00000024361) #22	CFAP141 (ENSGGOG00000005688)	ENSGGOG00000000472 #23	NUP210L (ENSGGOG00000014209) #25	ENSGGOG00000024810 ##26	RAB13 (ENSGGOG00000023693) #27	JTB (ENSGGOG00000005608) #28	CREB3L4 (ENSGGOG00000005601) #29	SLC39A1 (ENSGGOG00000038266) #30	CRTC2 (ENSGGOG00000023553) #31	DENND4B (ENSGGOG00000003845) #32	ENSGGOG00000036518	GATAD2B (ENSGGOG00000012553) #33	SLC27A3 (ENSGGOG00000003856) #34	ENSGGOG00000025172 #36	INTS3 (ENSGGOG00000003835) #35
Orangutan	DUPLICATION
Orangutan	MODERN SPECIES		SHC1 (ENSPPYG00000000769)	PYGO2 (ENSPPYG00000000770) #7	PBXIP1 (ENSPPYG00000000771)	PMVK (ENSPPYG00000000772) #10	KCNN3 (ENSPPYG00000000774) #11	ADAR (ENSPPYG00000000776) #12	CHRNB2 (ENSPPYG00000000777) #13	UBE2Q1 (ENSPPYG00000000778) #14	TDRD10 (ENSPPYG00000000779) #15	SHE (ENSPPYG00000000780) #16	IL6R (ENSPPYG00000000781) #17	ATP8B2 (ENSPPYG00000029424) #18	AQP10 (ENSPPYG00000000782) #19	HAX1 (ENSPPYG00000000783) #20	UBAP2L (ENSPPYG00000000784) #21	C1H1orf43 (ENSPPYG00000000785) #22	CFAP141 (ENSPPYG00000000786)	TPM3 (ENSPPYG00000000787) #23	NUP210L (ENSPPYG00000000788) #25	RPS27 (ENSPPYG00000000789) ##26	RAB13 (ENSPPYG00000000790) #27	JTB (ENSPPYG00000000791) #28	CREB3L4 (ENSPPYG00000000792) #29	SLC39A1 (ENSPPYG00000000793) #30	CRTC2 (ENSPPYG00000000794) #31	DENND4B (ENSPPYG00000000795) #32	GATAD2B (ENSPPYG00000029612) #33	SLC27A3 (ENSPPYG00000000796) #34	INTS3 (ENSPPYG00000000797) #35	NPR1 (ENSPPYG00000000799)	ILF2 (ENSPPYG00000000800)
Orangutan	MODERN SPECIES	3	CHFR (ENSPPYG00000005149)	GOLGA3 (ENSPPYG00000005148)	ANKLE2 (ENSPPYG00000005147)	ENSPPYG00000005145	PGAM5 (ENSPPYG00000041584)	POLE (ENSPPYG00000005143)	P2RX2 (ENSPPYG00000005142)	LRCOL1 (ENSPPYG00000038772)	FBRSL1 (ENSPPYG00000005141)	GALNT9 (ENSPPYG00000005137)	NOC4L (ENSPPYG00000005136)	DDX51 (ENSPPYG00000005135)	EP400 (ENSPPYG00000005133)	PUS1 (ENSPPYG00000005132)	ULK1 (ENSPPYG00000005131)	ENSPPYG00000040438 #22	MMP17 (ENSPPYG00000005130)	SFSWAP (ENSPPYG00000005129)	ENSPPYG00000005128	ENSPPYG00000005167	ADGRD1 (ENSPPYG00000005125)	RAN (ENSPPYG00000040933)	STX2 (ENSPPYG00000005123)	RIMBP2 (ENSPPYG00000005122)	PIWIL1 (ENSPPYG00000005121)	FZD10 (ENSPPYG00000005120)	TMEM132D (ENSPPYG00000005118)	GLT1D1 (ENSPPYG00000005117)	SLC15A4 (ENSPPYG00000005114)	TMEM132C (ENSPPYG00000005113)	ENSPPYG00000035945
Platyrrhini	ANCESTRAL SPECIES	12	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.g #20	ENSGT00390000003453.b.b.k #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.s ##26	ENSGT00950000182891.a.a.b.a.b.b.b #26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35
Mas night monkey	MODERN SPECIES	910														ENSANAG00000023845 #20	UBAP2L (ENSANAG00000032725) #21	C1orf43 (ENSANAG00000020121) #22	CFAP141 (ENSANAG00000025877)	ENSANAG00000026297 #23	NUP210L (ENSANAG00000034116) #25	ENSANAG00000029042 ##26	RAB13 (ENSANAG00000030247) #27	JTB (ENSANAG00000015894) #28	CREB3L4 (ENSANAG00000022154) #29	SLC39A1 (ENSANAG00000024275) #30	CRTC2 (ENSANAG00000021082) #31	DENND4B (ENSANAG00000035816) #32	GATAD2B (ENSANAG00000035590) #33	SLC27A3 (ENSANAG00000021298) #34	ENSANAG00000036113 #36	INTS3 (ENSANAG00000037379) #35	NPR1 (ENSANAG00000027608)
Cebidae	ANCESTRAL SPECIES	12	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.g #20	ENSGT00390000003453.b.b.k #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.b.b #26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062.m #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35	ENSGT00940000156223
Cebidae_a	ANCESTRAL SPECIES	6	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00910000147660	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324.g #20	ENSGT00390000003453.b.b.k #21	ENSGT00390000003453.b.b.l #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.b.b #26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062.m #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35	ENSGT00940000156223
Capuchin	MODERN SPECIES	491	PYGO2 (ENSCCAG00000033040) #7	PBXIP1 (ENSCCAG00000021101)	PMVK (ENSCCAG00000026930) #10	KCNN3 (ENSCCAG00000035868) #11	ENSCCAG00000021035	ADAR (ENSCCAG00000028498) #12	CHRNB2 (ENSCCAG00000033456) #13	UBE2Q1 (ENSCCAG00000020761) #14	TDRD10 (ENSCCAG00000021454) #15	SHE (ENSCCAG00000023561) #16	IL6R (ENSCCAG00000035881) #17	ATP8B2 (ENSCCAG00000030333) #18	AQP10 (ENSCCAG00000023287) #19	HAX1 (ENSCCAG00000027745) #20	UBAP2L (ENSCCAG00000023226) #21	C1orf43 (ENSCCAG00000031953) #22	CFAP141 (ENSCCAG00000024957)	ENSCCAG00000029868 #23	NUP210L (ENSCCAG00000028092) #25	RPS27 (ENSCCAG00000013768) #26	RAB13 (ENSCCAG00000028502) #27	JTB (ENSCCAG00000029820) #28	CREB3L4 (ENSCCAG00000031305) #29	ENSCCAG00000034088 #30	CRTC2 (ENSCCAG00000033905) #31	DENND4B (ENSCCAG00000023936) #32	GATAD2B (ENSCCAG00000036020) #33	SLC27A3 (ENSCCAG00000027756) #34	ENSCCAG00000015470 #36	INTS3 (ENSCCAG00000024830) #35	ENSCCAG00000030361
Bolivian squirrel monkey	MODERN SPECIES	194												ATP8B2 (ENSSBOG00000034424) #18	AQP10 (ENSSBOG00000011977) #19	HAX1 (ENSSBOG00000033341) #20	UBAP2L (ENSSBOG00000021575) #21	C1orf43 (ENSSBOG00000023168) #22	CFAP141 (ENSSBOG00000014715)	TPM3 (ENSSBOG00000023490) ##23	NUP210L (ENSSBOG00000033835) #25	ENSSBOG00000022231 ##26	RAB13 (ENSSBOG00000020342) #27	JTB (ENSSBOG00000021943) #28	CREB3L4 (ENSSBOG00000035500) #29	ENSSBOG00000018639 #30	CRTC2 (ENSSBOG00000035017) #31	DENND4B (ENSSBOG00000028638) #32	GATAD2B (ENSSBOG00000030783) #33	SLC27A3 (ENSSBOG00000022512) #34	INTS3 (ENSSBOG00000027353) #35	ENSSBOG00000031241	NPR1 (ENSSBOG00000029904)
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	3	MRLN (ENSCJAG00000006871)	ANK3 (ENSCJAG00000006912)	ENSCJAG00000021801	CDK1 (ENSCJAG00000007001)	ENSCJAG00000076738	RHOBTB1 (ENSCJAG00000007026)	ENSCJAG00000082605	TMEM26 (ENSCJAG00000007057)	CABCOCO1 (ENSCJAG00000007069)	ARID5B (ENSCJAG00000051725)	RTKN2 (ENSCJAG00000007086)	ZNF365 (ENSCJAG00000007112)	ADO (ENSCJAG00000042988)	EGR2 (ENSCJAG00000062137)	ENSCJAG00000043457	ENSCJAG00000067977 #22	ENSCJAG00000074200	ENSCJAG00000081956	JMJD1C (ENSCJAG00000007163)	REEP3 (ENSCJAG00000038962)	ENSCJAG00000071549	ENSCJAG00000075808	LRRTM3 (ENSCJAG00000019359)	CTNNA3 (ENSCJAG00000019354)	ENSCJAG00000074615	DNAJC12 (ENSCJAG00000019345)	SIRT1 (ENSCJAG00000019318)	HERC4 (ENSCJAG00000019252)	MYPN (ENSCJAG00000019196)	ATOH7 (ENSCJAG00000045520)	PBLD (ENSCJAG00000019181)
Marmoset	MODERN SPECIES	9	PYGO2 (ENSCJAG00000040555) #7	PBXIP1 (ENSCJAG00000009346)	PMVK (ENSCJAG00000045283) #10	ENSCJAG00000074840	KCNN3 (ENSCJAG00000009390) #11	ADAR (ENSCJAG00000009410) #12	CHRNB2 (ENSCJAG00000009523) #13	UBE2Q1 (ENSCJAG00000009446) #14	TDRD10 (ENSCJAG00000009543) #15	SHE (ENSCJAG00000009551) #16	IL6R (ENSCJAG00000009567) #17	ATP8B2 (ENSCJAG00000009583) #18	AQP10 (ENSCJAG00000009657) #19	HAX1 (ENSCJAG00000009660) #20	UBAP2L (ENSCJAG00000009677) #21	C1orf43 (ENSCJAG00000009722) #22	CFAP141 (ENSCJAG00000009736)	TPM3 (ENSCJAG00000009747) ##23	NUP210L (ENSCJAG00000009801) #25	ENSCJAG00000009929 #26	RAB13 (ENSCJAG00000009933) #27	JTB (ENSCJAG00000009973) #28	CREB3L4 (ENSCJAG00000009978) #29	SLC39A1 (ENSCJAG00000010006) #30	CRTC2 (ENSCJAG00000010045) #31	DENND4B (ENSCJAG00000010062) #32	ENSCJAG00000078615 ##37	ENSCJAG00000076924	ENSCJAG00000077150	GATAD2B (ENSCJAG00000010131) #33	SLC27A3 (ENSCJAG00000010147) #34
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	4859														ENSTSYG00000035534 #20	UBAP2L (ENSTSYG00000012782) #21	CUNH1orf43 (ENSTSYG00000036266) #22	CFAP141 (ENSTSYG00000034804)	TPM3 (ENSTSYG00000029863) #23	NUP210L (ENSTSYG00000008554) #25	RPS27 (ENSTSYG00000037181) ##26
Tarsier	MODERN SPECIES	6850																ENSTSYG00000035630 #22	LEPR (ENSTSYG00000011941)
Strepsirrhini	DUPLICATION
Strepsirrhini	DUPLICATION
Strepsirrhini	ANCESTRAL SPECIES																	ENSGT00510000047366.kb.a #22
Bushbaby	MODERN SPECIES	262	MRPL35 (ENSOGAG00000004048)	REEP1 (ENSOGAG00000004049)	KDM3A (ENSOGAG00000011445)	ENSOGAG00000030818	RNF103 (ENSOGAG00000034488)	ENSOGAG00000027674	ENSOGAG00000033216	RMND5A (ENSOGAG00000007229)	CD8A (ENSOGAG00000007233)	ENSOGAG00000007240	ENSOGAG00000014484	KRCC1 (ENSOGAG00000016183)	SMYD1 (ENSOGAG00000016185)	FABP1 (ENSOGAG00000033714)	THNSL2 (ENSOGAG00000016194)	ENSOGAG00000024873 #22	ENSOGAG00000029215	TEX37 (ENSOGAG00000024721)	EIF2AK3 (ENSOGAG00000008231)	RPIA (ENSOGAG00000034178)	IGKC (ENSOGAG00000024766)	ENSOGAG00000017218	IGKV4-1 (ENSOGAG00000017219)	ENSOGAG00000033016	ENSOGAG00000032108	ENSOGAG00000033208	ENSOGAG00000027925	ENSOGAG00000026798	ENSOGAG00000024940	ENSOGAG00000031332	ENSOGAG00000010223
Lemuriformes	ANCESTRAL SPECIES																	ENSGT00510000047366.kb.a #22
Lemuriformes_a	ANCESTRAL SPECIES																	ENSGT00510000047366.kb.a #22
Coquerels sifaka	MODERN SPECIES	697	MIS18A (ENSPCOG00000024896)	HUNK (ENSPCOG00000007940)	ENSPCOG00000022163	SCAF4 (ENSPCOG00000018710)	ENSPCOG00000019554	TIAM1 (ENSPCOG00000026538)	KRTAP19-8 (ENSPCOG00000014486)	KRTAP6-1 (ENSPCOG00000020897)	KRTAP19-7 (ENSPCOG00000026533)	ENSPCOG00000021232	ENSPCOG00000026332	ENSPCOG00000023297	ENSPCOG00000008176	GRIK1 (ENSPCOG00000025437)	BACH1 (ENSPCOG00000022879)	ENSPCOG00000021857 #22	MAP3K7CL (ENSPCOG00000022793)	CCT8 (ENSPCOG00000025167)	USP16 (ENSPCOG00000015373)	RWDD2B (ENSPCOG00000028447)	LTN1 (ENSPCOG00000025757)	N6AMT1 (ENSPCOG00000027720)
Strepsirrhini	ANCESTRAL SPECIES	115																ENSGT00510000047366.kb.b #22	ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.b ##23
Bushbaby	MODERN SPECIES	359															UBAP2L (ENSOGAG00000012014) #21	ENSOGAG00000012008 #22	ENSOGAG00000025133 ##23	NUP210L (ENSOGAG00000003072) #25	ENSOGAG00000003071 #26	RAB13 (ENSOGAG00000016969) #27	CREB3L4 (ENSOGAG00000016958) #29	SLC39A1 (ENSOGAG00000031108) #30	CRTC2 (ENSOGAG00000029515) #31	DENND4B (ENSOGAG00000029879) #32	GATAD2B (ENSOGAG00000004606) #33	SLC27A3 (ENSOGAG00000001089) #34	INTS3 (ENSOGAG00000001080) #35	NPR1 (ENSOGAG00000030073)	SNAPIN (ENSOGAG00000006068)	CHTOP (ENSOGAG00000010674)	ENSOGAG00000010672
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366.lb #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00950000182891.a.a.b.a.b.b.b #26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35
Lemuriformes	ANCESTRAL SPECIES	11	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366.lb #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062.o #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35
Mouse lemur	MODERN SPECIES	11	FLAD1 (ENSMICG00000007946)	CKS1B (ENSMICG00000046559)	SHC1 (ENSMICG00000007933)	PYGO2 (ENSMICG00000047317) #7	PBXIP1 (ENSMICG00000028704)	PMVK (ENSMICG00000042375) #10	KCNN3 (ENSMICG00000001441) #11	ADAR (ENSMICG00000001431) #12	CHRNB2 (ENSMICG00000031010) #13	UBE2Q1 (ENSMICG00000001427) #14	TDRD10 (ENSMICG00000001419) #15	ATP8B2 (ENSMICG00000003529) #18	AQP10 (ENSMICG00000003522) #19	ENSMICG00000010414 #20	UBAP2L (ENSMICG00000010402) #21	C1orf43 (ENSMICG00000033180) #22	CFAP141 (ENSMICG00000010401)	ENSMICG00000010389 #23	NUP210L (ENSMICG00000010354) #25	ENSMICG00000010351 #26	RAB13 (ENSMICG00000010340) #27	JTB (ENSMICG00000010337) #28	CREB3L4 (ENSMICG00000010316) #29	ENSMICG00000037483 #30	CRTC2 (ENSMICG00000010302) #31	DENND4B (ENSMICG00000010282) #32	GATAD2B (ENSMICG00000008874) #33	SLC27A3 (ENSMICG00000008852) #34	INTS3 (ENSMICG00000008832) #35	NPR1 (ENSMICG00000013747)	ENSMICG00000013730
Lemuriformes_a	ANCESTRAL SPECIES	19	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366.lb #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062.o #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00770000121731 #36	ENSGT00390000014184 #35	ENSGT00940000156223
Greater bamboo lemur	MODERN SPECIES	170	SHC1 (ENSPSMG00000022647)	PYGO2 (ENSPSMG00000022630) #7	PBXIP1 (ENSPSMG00000022621)	PMVK (ENSPSMG00000022597) #10	KCNN3 (ENSPSMG00000022581) #11	ADAR (ENSPSMG00000022560) #12	CHRNB2 (ENSPSMG00000022533) #13	UBE2Q1 (ENSPSMG00000022505) #14	TDRD10 (ENSPSMG00000022501) #15	SHE (ENSPSMG00000022479) #16	IL6R (ENSPSMG00000022470) #17	ATP8B2 (ENSPSMG00000022457) #18	AQP10 (ENSPSMG00000022420) #19	HAX1 (ENSPSMG00000022390) #20	UBAP2L (ENSPSMG00000022338) #21	C1orf43 (ENSPSMG00000022185) #22	CFAP141 (ENSPSMG00000022110)	TPM3 (ENSPSMG00000021762) ##23	NUP210L (ENSPSMG00000021418) #25	RPS27 (ENSPSMG00000021337) ##26	RAB13 (ENSPSMG00000021328) #27	JTB (ENSPSMG00000021290) #28	CREB3L4 (ENSPSMG00000021280) #29	SLC39A1 (ENSPSMG00000021265) #30	CRTC2 (ENSPSMG00000021234) #31	DENND4B (ENSPSMG00000021181) #32	GATAD2B (ENSPSMG00000021109) #33	ENSPSMG00000021059	SLC27A3 (ENSPSMG00000021038) #34	INTS3 (ENSPSMG00000021006) #35	NPR1 (ENSPSMG00000020930)
Coquerels sifaka	MODERN SPECIES	750	SHC1 (ENSPCOG00000028600)	PYGO2 (ENSPCOG00000025073) #7	PBXIP1 (ENSPCOG00000025592)	PMVK (ENSPCOG00000028344) #10	KCNN3 (ENSPCOG00000015107) #11	ADAR (ENSPCOG00000017300) #12	CHRNB2 (ENSPCOG00000020562) #13	UBE2Q1 (ENSPCOG00000019908) #14	TDRD10 (ENSPCOG00000027913) #15	SHE (ENSPCOG00000024371) #16	IL6R (ENSPCOG00000027249) #17	ATP8B2 (ENSPCOG00000018835) #18	AQP10 (ENSPCOG00000024103) #19	HAX1 (ENSPCOG00000014330) #20	UBAP2L (ENSPCOG00000017176) #21	C1orf43 (ENSPCOG00000011508) #22	CFAP141 (ENSPCOG00000011055)	TPM3 (ENSPCOG00000012036) ##23	NUP210L (ENSPCOG00000012674) #25	ENSPCOG00000012419 ##26	RAB13 (ENSPCOG00000012189) #27	JTB (ENSPCOG00000012486) #28	CREB3L4 (ENSPCOG00000019702) #29	SLC39A1 (ENSPCOG00000014811) #30	CRTC2 (ENSPCOG00000021940) #31	DENND4B (ENSPCOG00000021491) #32	GATAD2B (ENSPCOG00000015814) #33	SLC27A3 (ENSPCOG00000024101) #34	INTS3 (ENSPCOG00000022153) #35	ENSPCOG00000019296 #36	ENSPCOG00000023996
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00390000006620 #15	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223
Tree shrew	MODERN SPECIES	5090														HAX1 (ENSTBEG00000014445) #20	UBAP2L (ENSTBEG00000014009) #21	C1orf43 (ENSTBEG00000013866) #22	CFAP141 (ENSTBEG00000013818)	ENSTBEG00000013764 ##23	NUP210L (ENSTBEG00000012857) #25	RAB13 (ENSTBEG00000012734) #27	JTB (ENSTBEG00000012646) #28	CREB3L4 (ENSTBEG00000012480) #29	SLC39A1 (ENSTBEG00000012409) #30	CRTC2 (ENSTBEG00000012222) #31	DENND4B (ENSTBEG00000011792) #32
Glires	ANCESTRAL SPECIES		ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT00950000182891.a.a.b.a.b.b.b #26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223	ENSGT00940000154879	ENSGT00390000008274	ENSGT00390000002869
Pika	MODERN SPECIES	2747																C1orf43 (ENSOPRG00000007244) #22	CFAP141 (ENSOPRG00000007238)
Rabbit	MODERN SPECIES	4	CKS1B (ENSOCUG00000016204)	SHC1 (ENSOCUG00000016188)	PYGO2 (ENSOCUG00000016170) #7	ENSOCUG00000033095 #9	PMVK (ENSOCUG00000016158) #10	KCNN3 (ENSOCUG00000013552) #11	ADAR (ENSOCUG00000008544) #12	UBE2Q1 (ENSOCUG00000003709) #14	SHE (ENSOCUG00000016365) #16	IL6R (ENSOCUG00000016354) #17	ENSOCUG00000016320 #18	ENSOCUG00000032271 #18	AQP10 (ENSOCUG00000029059) #19	ENSOCUG00000032263 #20	UBAP2L (ENSOCUG00000023943) #21	C1orf43 (ENSOCUG00000011821) #22	NUP210L (ENSOCUG00000011794) #25	ENSOCUG00000022459	ENSOCUG00000005113	ENSOCUG00000030717	ENSOCUG00000011792 #26	RAB13 (ENSOCUG00000006286) #27	ENSOCUG00000011788 #28	CREB3L4 (ENSOCUG00000011784) #29	SLC39A1 (ENSOCUG00000003045) #30	CRTC2 (ENSOCUG00000015733) #31	ENSOCUG00000033615 #31	DENND4B (ENSOCUG00000011771) #32	GATAD2B (ENSOCUG00000008135) #33	SLC27A3 (ENSOCUG00000005457) #34	INTS3 (ENSOCUG00000005436) #35
Rodentia	ANCESTRAL SPECIES		ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223
Rodentia_A	ANCESTRAL SPECIES		ENSGT00950000182971.B.b.c.a.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223
Sciuridae	ANCESTRAL SPECIES		ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.b.b #26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000157062 #30	ENSGT00940000160806 #29	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223	ENSGT00940000154879
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	156	ENSSVLG00005017948	AGTR2 (ENSSVLG00005017968)	ENSSVLG00005017980	PLS3 (ENSSVLG00005018046)	ENSSVLG00005018340	ENSSVLG00005018369	LRCH2 (ENSSVLG00005018464)	IL13RA2 (ENSSVLG00005018862)	ENSSVLG00005018928	HTR2C (ENSSVLG00005018984)	ENSSVLG00005019077	ENSSVLG00005019126	ENSSVLG00005019177	ENSSVLG00005019228	ENSSVLG00005019275	ENSSVLG00005019330 #22	AMOT (ENSSVLG00005013525)	LHFPL1 (ENSSVLG00005013627)	ENSSVLG00005013685	ENSSVLG00005013733	RTL4 (ENSSVLG00005013764)	TRPC5 (ENSSVLG00005013851)	TRPC5OS (ENSSVLG00005013928)	ENSSVLG00005013966	ENSSVLG00005014045	ALG13 (ENSSVLG00005014257)	ENSSVLG00005014968	SERTM2 (ENSSVLG00005015020)	DCX (ENSSVLG00005015055)	CAPN6 (ENSSVLG00005015179)	PAK3 (ENSSVLG00005015386)
Eurasian red squirrel	MODERN SPECIES		CKS1B (ENSSVLG00005015746)	SHC1 (ENSSVLG00005015630)	PYGO2 (ENSSVLG00005015559) #7	PBXIP1 (ENSSVLG00005015475)	PMVK (ENSSVLG00005015430) #10	KCNN3 (ENSSVLG00005015083) #11	ADAR (ENSSVLG00005014799) #12	CHRNB2 (ENSSVLG00005014638) #13	UBE2Q1 (ENSSVLG00005014507) #14	SHE (ENSSVLG00005014400) #16	IL6R (ENSSVLG00005014351) #17	ATP8B2 (ENSSVLG00005014269) #18	AQP10 (ENSSVLG00005014066) #19	ENSSVLG00005013980 #20	UBAP2L (ENSSVLG00005013768) #21	C1orf43 (ENSSVLG00005013372) #22	CFAP141 (ENSSVLG00005013145)	ENSSVLG00005012292 #23	ENSSVLG00005011990 #25	ENSSVLG00005011949	ENSSVLG00005011935	ENSSVLG00005011875	RPS27 (ENSSVLG00005011813) ##26	ENSSVLG00005011603 #25	ENSSVLG00005011534 #26	RAB13 (ENSSVLG00005011364) #27	ENSSVLG00005011332	CREB3L4 (ENSSVLG00005011183) #29	SLC39A1 (ENSSVLG00005011031) #30	CRTC2 (ENSSVLG00005010882) #31	DENND4B (ENSSVLG00005010822) #32
Marmotini	ANCESTRAL SPECIES	33	ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00950000182891.a.a.b.a.b.b.b #26	ENSGT00940000159989 #27	ENSGT00390000016136.j #28	ENSGT00940000160806.b #29	ENSGT00940000160806.a.a #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34
Marmotini_b	ANCESTRAL SPECIES	37	ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989 #27	ENSGT00390000016136.j #28	ENSGT00940000160806.a.a #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223	ENSGT00940000154879
Squirrel	DUPLICATION
Squirrel	MODERN SPECIES	35																ENSSTOG00000033786 #22
Squirrel	MODERN SPECIES	282									DSC2 (ENSSTOG00000010425)	DSC1 (ENSSTOG00000010444)	DSG1 (ENSSTOG00000010463)	DSG4 (ENSSTOG00000010492)	DSG2 (ENSSTOG00000007528)	TTR (ENSSTOG00000007541)	B4GALT6 (ENSSTOG00000010911)	ENSSTOG00000033707 #22	TRAPPC8 (ENSSTOG00000012656)	RNF125 (ENSSTOG00000022555)	RNF138 (ENSSTOG00000002293)	MEP1B (ENSSTOG00000002298)	GAREM1 (ENSSTOG00000002308)	KLHL14 (ENSSTOG00000016263)
Squirrel	MODERN SPECIES	33																ENSSTOG00000031916 #22
Squirrel	MODERN SPECIES	180	CKS1B (ENSSTOG00000031911)	SHC1 (ENSSTOG00000000050)	PYGO2 (ENSSTOG00000000053) #7	PBXIP1 (ENSSTOG00000026941)	PMVK (ENSSTOG00000003639) #10	KCNN3 (ENSSTOG00000026978) #11	ADAR (ENSSTOG00000014151) #12	CHRNB2 (ENSSTOG00000026442) #13	UBE2Q1 (ENSSTOG00000003400) #14	SHE (ENSSTOG00000009301) #16	IL6R (ENSSTOG00000009285) #17	ATP8B2 (ENSSTOG00000014623) #18	AQP10 (ENSSTOG00000014619) #19	HAX1 (ENSSTOG00000014614) #20	UBAP2L (ENSSTOG00000014589) #21	ENSSTOG00000029834 #22	CFAP141 (ENSSTOG00000014580)	ENSSTOG00000023525 #23	NUP210L (ENSSTOG00000014542) #25	ENSSTOG00000032447 #26	RAB13 (ENSSTOG00000011222) #27	ENSSTOG00000014348 #28	CREB3L4 (ENSSTOG00000014516) #29	SLC39A1 (ENSSTOG00000001572) #30	CRTC2 (ENSSTOG00000027219) #31	DENND4B (ENSSTOG00000010539) #32	GATAD2B (ENSSTOG00000005407) #33	SLC27A3 (ENSSTOG00000020359) #34	INTS3 (ENSSTOG00000000670) #35	NPR1 (ENSSTOG00000022009)	ENSSTOG00000000667
Arctic ground squirrel	DUPLICATION
Arctic ground squirrel	MODERN SPECIES	3	EPC2 (ENSUPAG00010004529)	KIF5C (ENSUPAG00010004496)	LYPD6B (ENSUPAG00010004479)	LYPD6 (ENSUPAG00010004464)	MMADHC (ENSUPAG00010004432)	RND3 (ENSUPAG00010004413)	ENSUPAG00010004396	ENSUPAG00010004388	RBM43 (ENSUPAG00010004382)	NMI (ENSUPAG00010004358)	TNFAIP6 (ENSUPAG00010004346)	RIF1 (ENSUPAG00010002377)	NEB (ENSUPAG00010001764)	ENSUPAG00010001737	CACNB4 (ENSUPAG00010001584)	ENSUPAG00010001568 #22	STAM2 (ENSUPAG00010001468)	FMNL2 (ENSUPAG00010000658)	PRPF40A (ENSUPAG00010000254)	ARL6IP6 (ENSUPAG00010000239)
Arctic ground squirrel	MODERN SPECIES	566														HAX1 (ENSUPAG00010013917) #20	UBAP2L (ENSUPAG00010013962) #21	ENSUPAG00010014744 #22	CFAP141 (ENSUPAG00010014782)	TPM3 (ENSUPAG00010014794) ##23	NUP210L (ENSUPAG00010014983) #25	RPS27 (ENSUPAG00010015110) ##26	RAB13 (ENSUPAG00010015124) #27	JTB (ENSUPAG00010015137) #28	ENSUPAG00010015154 #29	SLC39A1 (ENSUPAG00010015164) #30	CRTC2 (ENSUPAG00010015170) #31	DENND4B (ENSUPAG00010015204) #32	GATAD2B (ENSUPAG00010015294) #33	SLC27A3 (ENSUPAG00010015351) #34	INTS3 (ENSUPAG00010015361) #35	NPR1 (ENSUPAG00010015422)	ILF2 (ENSUPAG00010015468)
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	5	MMADHC (ENSMMMG00000021733)	RND3 (ENSMMMG00000021746)	ENSMMMG00000021752	ENSMMMG00000021771	ENSMMMG00000021776	ENSMMMG00000021801	RBM43 (ENSMMMG00000021824)	NMI (ENSMMMG00000021825)	ENSMMMG00000021827	TNFAIP6 (ENSMMMG00000021834)	RIF1 (ENSMMMG00000021851)	NEB (ENSMMMG00000021921)	ENSMMMG00000022061	CACNB4 (ENSMMMG00000022074)	STAM2 (ENSMMMG00000022104)	ENSMMMG00000022120 #22	FMNL2 (ENSMMMG00000022132)	PRPF40A (ENSMMMG00000022291)	ARL6IP6 (ENSMMMG00000022320)	ENSMMMG00000022335	ENSMMMG00000022338	ENSMMMG00000022342	ENSMMMG00000022354	KCNJ3 (ENSMMMG00000022368)	NR4A2 (ENSMMMG00000022388)	GPD2 (ENSMMMG00000022395)	ENSMMMG00000022423	ENSMMMG00000022427	ERMN (ENSMMMG00000022432)	CYTIP (ENSMMMG00000022447)	ACVR1C (ENSMMMG00000022458)
Alpin marmot	MODERN SPECIES	85	ENSMMMG00000017079	PYGO2 (ENSMMMG00000017091) #7	PBXIP1 (ENSMMMG00000017093)	ENSMMMG00000017115 #10	KCNN3 (ENSMMMG00000017128) #11	ENSMMMG00000017139	ADAR (ENSMMMG00000017145) #12	CHRNB2 (ENSMMMG00000017189) #13	UBE2Q1 (ENSMMMG00000017197) #14	SHE (ENSMMMG00000017208) #16	IL6R (ENSMMMG00000017215) #17	ATP8B2 (ENSMMMG00000017287) #18	AQP10 (ENSMMMG00000017359) #19	HAX1 (ENSMMMG00000017363) #20	UBAP2L (ENSMMMG00000017401) #21	ENSMMMG00000017556 #22	TPM3 (ENSMMMG00000017605) ##23	ENSMMMG00000017625 #25	ENSMMMG00000017632 #25	ENSMMMG00000017652 #26	RAB13 (ENSMMMG00000017661) #27	ENSMMMG00000017675 #28	ENSMMMG00000017685 #29	ENSMMMG00000017690 #29	SLC39A1 (ENSMMMG00000017691) #30	CRTC2 (ENSMMMG00000017698) #31	DENND4B (ENSMMMG00000017709) #32	GATAD2B (ENSMMMG00000017734) #33	SLC27A3 (ENSMMMG00000017745) #34	INTS3 (ENSMMMG00000017913) #35	NPR1 (ENSMMMG00000017990)
Alpin marmot	MODERN SPECIES	12	YOD1 (ENSMMMG00000003106)	PFKFB2 (ENSMMMG00000002404)	C4BPB (ENSMMMG00000002378)	C4BPA (ENSMMMG00000002369)	ENSMMMG00000002134	ENSMMMG00000002084	ENSMMMG00000002053	ENSMMMG00000001930	CR2 (ENSMMMG00000001798)	ENSMMMG00000001760	ENSMMMG00000001729	ENSMMMG00000001683	ENSMMMG00000001666	CD34 (ENSMMMG00000001505)	PLXNA2 (ENSMMMG00000001414)	ENSMMMG00000001390 #22	CAMK1G (ENSMMMG00000001301)	LAMB3 (ENSMMMG00000001176)	G0S2 (ENSMMMG00000001164)	HSD11B1 (ENSMMMG00000001148)	TRAF3IP3 (ENSMMMG00000001053)	C1orf74 (ENSMMMG00000001035)	IRF6 (ENSMMMG00000001014)	UTP25 (ENSMMMG00000000999)	SYT14 (ENSMMMG00000000958)	SERTAD4 (ENSMMMG00000000936)	HHAT (ENSMMMG00000000889)	KCNH1 (ENSMMMG00000000821)	RCOR3 (ENSMMMG00000000787)	TRAF5 (ENSMMMG00000000707)	RD3 (ENSMMMG00000000691)
Hystricomorpha	ANCESTRAL SPECIES	45	ENSGT00950000182971.B.b.c.a.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989.f #27	ENSGT00950000182891.a.a.b.a.b.b.a ##26	ENSGT00940000159989.e #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34
Naked mole-rat female	DUPLICATION
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	10	PYGO2 (ENSHGLG00000007163) #7	PBXIP1 (ENSHGLG00000008141)	PMVK (ENSHGLG00000009156) #10	KCNN3 (ENSHGLG00000015775) #11	ENSHGLG00000021095	ADAR (ENSHGLG00000017910) #12	CHRNB2 (ENSHGLG00000007150) #13	ENSHGLG00000007304 #14	ENSHGLG00000035218 #16	IL6R (ENSHGLG00000032250) #17	ATP8B2 (ENSHGLG00000018554) #18	AQP10 (ENSHGLG00000018126) #19	ENSHGLG00000018499	HAX1 (ENSHGLG00000018827) #20	UBAP2L (ENSHGLG00000009352) #21	ENSHGLG00000043186 #22	CFAP141 (ENSHGLG00000034346)	ENSHGLG00000035415 #23	ENSHGLG00000010502 ##23	NUP210L (ENSHGLG00000039681) #25	RPS27 (ENSHGLG00000007748) ##26	RAB13 (ENSHGLG00000008749) #27	JTB (ENSHGLG00000040053) #28	CREB3L4 (ENSHGLG00000033275) #29	SLC39A1 (ENSHGLG00000007034) #30	CRTC2 (ENSHGLG00000008041) #31	DENND4B (ENSHGLG00000006184) #32	ENSHGLG00000015467 #33	ENSHGLG00000034978	ENSHGLG00000038740	ENSHGLG00000046497
Naked mole-rat female	MODERN SPECIES	27	HPSE (ENSHGLG00000018930)	HELQ (ENSHGLG00000019137)	ENSHGLG00000036989	ENSHGLG00000036220	ENSHGLG00000037131	Gpat3 (ENSHGLG00000003421)	ENSHGLG00000043322	ENSHGLG00000045281	ENSHGLG00000037327	ENSHGLG00000035706	ENSHGLG00000004204	ENSHGLG00000004589	CDS1 (ENSHGLG00000049384)	WDFY3 (ENSHGLG00000002966)	ENSHGLG00000041678	ENSHGLG00000000796 #22	ENSHGLG00000000768	ENSHGLG00000019846	ENSHGLG00000001024	ENSHGLG00000000901	ENSHGLG00000046052	ENSHGLG00000034553	ENSHGLG00000019806	ENSHGLG00000005605	ENSHGLG00000001145	SLC10A6 (ENSHGLG00000001287)	ENSHGLG00000001308	ENSHGLG00000045541	AFF1 (ENSHGLG00000001384)	ENSHGLG00000008155	ENSHGLG00000032120
Naked mole-rat female	MODERN SPECIES	23	DHX57 (ENSHGLG00000015212)	ENSHGLG00000005484	ARHGEF33 (ENSHGLG00000007085)	SOS1 (ENSHGLG00000008560)	ENSHGLG00000045652	CDKL4 (ENSHGLG00000044538)	MAP4K3 (ENSHGLG00000018638)	ENSHGLG00000037179	ENSHGLG00000038781	ENSHGLG00000051001	ENSHGLG00000019145	ENSHGLG00000046900	ENSHGLG00000042007	ENSHGLG00000015079	ENSHGLG00000015808	ENSHGLG00000044522 #22	ENSHGLG00000038868	ENSHGLG00000046799	ENSHGLG00000039075	ENSHGLG00000007285	ENSHGLG00000009421	COX7A2L (ENSHGLG00000050207)	KCNG3 (ENSHGLG00000050660)	ENSHGLG00000032595	Mta3 (ENSHGLG00000013809)	ENSHGLG00000033761	HAAO (ENSHGLG00000042032)	ZFP36L2 (ENSHGLG00000035572)	THADA (ENSHGLG00000005656)	PLEKHH2 (ENSHGLG00000007771)	ENSHGLG00000012261
Hystricomorpha_a	ANCESTRAL SPECIES	54	ENSGT00950000182971.B.b.c.a.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989.f #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223	ENSGT00940000154879
Guinea pig	MODERN SPECIES	10	PYGO2 (ENSCPOG00000038298) #7	PBXIP1 (ENSCPOG00000005112)	PMVK (ENSCPOG00000006036) #10	KCNN3 (ENSCPOG00000015718) #11	ENSCPOG00000020156 #13	ADAR (ENSCPOG00000005463) #12	ENSCPOG00000013155 #13	UBE2Q1 (ENSCPOG00000001472) #14	SHE (ENSCPOG00000001163) #16	IL6R (ENSCPOG00000033327) #17	ENSCPOG00000037176	ATP8B2 (ENSCPOG00000014022) #18	AQP10 (ENSCPOG00000039313) #19	HAX1 (ENSCPOG00000007307) #20	ENSCPOG00000021439 #21	C1orf43 (ENSCPOG00000006131) #22	CFAP141 (ENSCPOG00000039253)	TPM3 (ENSCPOG00000032186) ##23	ENSCPOG00000007264 #25	ENSCPOG00000024660 ##26	RAB13 (ENSCPOG00000011491) #27	JTB (ENSCPOG00000012906) #28	CREB3L4 (ENSCPOG00000034503) #29	SLC39A1 (ENSCPOG00000039162) #30	CRTC2 (ENSCPOG00000012884) #31	DENND4B (ENSCPOG00000012910) #32	GATAD2B (ENSCPOG00000010326) #33	SLC27A3 (ENSCPOG00000009466) #34	INTS3 (ENSCPOG00000009450) #35	NPR1 (ENSCPOG00000025084)	ILF2 (ENSCPOG00000005835)
Hystricomorpha_b	ANCESTRAL SPECIES	61	ENSGT00950000182971.B.b.c.a.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989.f #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223	ENSGT00940000154879
Long-tailed chinchilla	DUPLICATION
Long-tailed chinchilla	MODERN SPECIES	252	SHC1 (ENSCLAG00000005022)	PYGO2 (ENSCLAG00000004985) #7	PBXIP1 (ENSCLAG00000004914)	PMVK (ENSCLAG00000004787) #10	KCNN3 (ENSCLAG00000004330) #11	ADAR (ENSCLAG00000005402) #12	CHRNB2 (ENSCLAG00000005132) #13	UBE2Q1 (ENSCLAG00000005048) #14	SHE (ENSCLAG00000004987) #16	ENSCLAG00000004750	IL6R (ENSCLAG00000004093) #17	ATP8B2 (ENSCLAG00000003593) #18	AQP10 (ENSCLAG00000004886) #19	ENSCLAG00000004829 #20	UBAP2L (ENSCLAG00000003903) #21	ENSCLAG00000012981 #22	CFAP141 (ENSCLAG00000011799)	TPM3 (ENSCLAG00000010440) ##23	NUP210L (ENSCLAG00000007281) #25	RPS27 (ENSCLAG00000006809) ##26	RAB13 (ENSCLAG00000006603) #27	JTB (ENSCLAG00000009842) #28	CREB3L4 (ENSCLAG00000008566) #29	SLC39A1 (ENSCLAG00000008243) #30	CRTC2 (ENSCLAG00000007860) #31	DENND4B (ENSCLAG00000005313) #32	GATAD2B (ENSCLAG00000004814) #33	SLC27A3 (ENSCLAG00000004445) #34	INTS3 (ENSCLAG00000003620) #35	NPR1 (ENSCLAG00000004130)	SNAPIN (ENSCLAG00000003233)
Long-tailed chinchilla	MODERN SPECIES	58																ENSCLAG00000000055 #22
Degu	DUPLICATION
Degu	MODERN SPECIES	73	CKS1B (ENSODEG00000011374)	SHC1 (ENSODEG00000011945)	PYGO2 (ENSODEG00000012415) #7	PBXIP1 (ENSODEG00000011532)	PMVK (ENSODEG00000011395) #10	KCNN3 (ENSODEG00000011444) #11	ADAR (ENSODEG00000011111) #12	CHRNB2 (ENSODEG00000011916) #13	ENSODEG00000020162	UBE2Q1 (ENSODEG00000012607) #14	SHE (ENSODEG00000010544) #16	ATP8B2 (ENSODEG00000010646) #18	ENSODEG00000010731 #20	ENSODEG00000011367 #21	ENSODEG00000012117 #21	ENSODEG00000011467 #22	CFAP141 (ENSODEG00000011475)	TPM3 (ENSODEG00000011815) ##23	NUP210L (ENSODEG00000011746) #25	ENSODEG00000012394 ##26	ENSODEG00000012634 #27	JTB (ENSODEG00000012805) #28	CREB3L4 (ENSODEG00000013013) #29	SLC39A1 (ENSODEG00000012305) #30	CRTC2 (ENSODEG00000012430) #31	DENND4B (ENSODEG00000013675) #32	ENSODEG00000019967	GATAD2B (ENSODEG00000012298) #33	SLC27A3 (ENSODEG00000012359) #34	INTS3 (ENSODEG00000012581) #35	NPR1 (ENSODEG00000013147)
Degu	MODERN SPECIES	84	ENSODEG00000019376	ENSODEG00000008690	ENSODEG00000019255	ENSODEG00000019220	BTD (ENSODEG00000006036)	DNASE1L3 (ENSODEG00000006359)	ENSODEG00000006739	FLNB (ENSODEG00000008526)	SLMAP (ENSODEG00000005798)	ENSODEG00000006496	ENSODEG00000019341	DENND6A (ENSODEG00000005908)	ENSODEG00000006837	PDE12 (ENSODEG00000006268)	ENSODEG00000006477	ENSODEG00000009106 #22	ENSODEG00000009554	ENSODEG00000019205	ENSODEG00000006288	ASB14 (ENSODEG00000005874)	APPL1 (ENSODEG00000005753)	ENSODEG00000008648	ENSODEG00000009148	ENSODEG00000007374	ARHGEF3 (ENSODEG00000007707)	ENSODEG00000007518	ENSODEG00000008069	TASOR (ENSODEG00000006527)	ENSODEG00000007286	CCDC66 (ENSODEG00000010465)	ERC2 (ENSODEG00000006199)
Rodentia_B	ANCESTRAL SPECIES		ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223	ENSGT00940000154879
Kangaroo rat	MODERN SPECIES	345	ENSDORG00000023152	Shc1 (ENSDORG00000003763)	Pbxip1 (ENSDORG00000003761)	Pmvk (ENSDORG00000026581) #10	Kcnn3 (ENSDORG00000027750) #11	Adar (ENSDORG00000007813) #12	Chrnb2 (ENSDORG00000007810) #13	Ube2q1 (ENSDORG00000007808) #14	She (ENSDORG00000007804) #16	Il6ra (ENSDORG00000014779) #17	Atp8b2 (ENSDORG00000008652) #18	ENSDORG00000008649 #19	ENSDORG00000012587 #20	ENSDORG00000027500 #21	ENSDORG00000027148 #21	4933434E20Rik (ENSDORG00000005454) #22	Cfap141 (ENSDORG00000029641)	ENSDORG00000006208 ##23	ENSDORG00000023795 ##26	Nup210l (ENSDORG00000001594) #25	ENSDORG00000001593 #26	Rab13 (ENSDORG00000001591) #27	Jtb (ENSDORG00000028390) #28	Creb3l4 (ENSDORG00000011769) #29	Slc39a1 (ENSDORG00000027137) #30	Crtc2 (ENSDORG00000011766) #31	Dennd4b (ENSDORG00000011762) #32	ENSDORG00000028146	Gatad2b (ENSDORG00000013431) #33	Slc27a3 (ENSDORG00000001476) #34	Ints3 (ENSDORG00000001484) #35
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223	ENSGT00940000154879
Lesser Egyptian jerboa	MODERN SPECIES	141	Cks1b (ENSJJAG00000000355)	Shc1 (ENSJJAG00000014070)	Pygo2 (ENSJJAG00000011008) #7	Pbxip1 (ENSJJAG00000011330)	Pmvk (ENSJJAG00000013837) #10	Kcnn3 (ENSJJAG00000007766) #11	Adar (ENSJJAG00000022056) #12	Chrnb2 (ENSJJAG00000020105) #13	Ube2q1 (ENSJJAG00000011804) #14	She (ENSJJAG00000009909) #16	ENSJJAG00000023975 #18	ENSJJAG00000023267 #18	ENSJJAG00000023866 #19	Hax1 (ENSJJAG00000020120) #20	Ubap2l (ENSJJAG00000021524) #21	4933434E20Rik (ENSJJAG00000004208) #22	Cfap141 (ENSJJAG00000015562)	Tpm3 (ENSJJAG00000017959) #23	Nup210l (ENSJJAG00000010321) #25	ENSJJAG00000019594 ##26	Rab13 (ENSJJAG00000010575) #27	Jtb (ENSJJAG00000002705) #28	Creb3l4 (ENSJJAG00000010946) #29	Slc39a1 (ENSJJAG00000022954) #30	Crtc2 (ENSJJAG00000009825) #31	Dennd4b (ENSJJAG00000002150) #32	Gatad2b (ENSJJAG00000024336) #33	Slc27a3 (ENSJJAG00000024298) #34	Ints3 (ENSJJAG00000019885) #35	Npr1 (ENSJJAG00000021087)	ENSJJAG00000023269
Muroidea	ANCESTRAL SPECIES	6	ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223	ENSGT00940000154879
Upper Galilee mountains blind mole rat	MODERN SPECIES	497	Flad1 (ENSNGAG00000019467)	Cks1b (ENSNGAG00000021059)	Shc1 (ENSNGAG00000000764)	Pygo2 (ENSNGAG00000001061) #7	Pbxip1 (ENSNGAG00000001561)	Pmvk (ENSNGAG00000009702) #10	Kcnn3 (ENSNGAG00000012664) #11	Adar (ENSNGAG00000016696) #12	Chrnb2 (ENSNGAG00000007991) #13	Ube2q1 (ENSNGAG00000010765) #14	She (ENSNGAG00000011383) #16	Il6ra (ENSNGAG00000013306) #17	Atp8b2 (ENSNGAG00000016615) #18	Hax1 (ENSNGAG00000000939) #20	ENSNGAG00000022133 #21	4933434E20Rik (ENSNGAG00000023898) #22	Cfap141 (ENSNGAG00000006314)	Tpm3 (ENSNGAG00000022391) #23	Nup210l (ENSNGAG00000005884) #25	Rps27 (ENSNGAG00000005823) ##26	Rab13 (ENSNGAG00000010309) #27	ENSNGAG00000011293 #28	Creb3l4 (ENSNGAG00000013822) #29	ENSNGAG00000017607 #30	Crtc2 (ENSNGAG00000018956) #31	Dennd4b (ENSNGAG00000021805) #32	Gatad2b (ENSNGAG00000020296) #33	Slc27a3 (ENSNGAG00000021835) #34	Ints3 (ENSNGAG00000023917) #35	Npr1 (ENSNGAG00000011425)	Ilf2 (ENSNGAG00000012145)
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.y ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223	ENSGT00940000154879
Murinae	ANCESTRAL SPECIES	5	ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.y ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223
Rat	DUPLICATION
Rat	MODERN SPECIES	11	Cks1b (ENSRNOG00000042561)	Shc1 (ENSRNOG00000020657)	Pygo2 (ENSRNOG00000020663) #7	Pbxip1 (ENSRNOG00000020673)	Pmvk (ENSRNOG00000020696) #10	Kcnn3 (ENSRNOG00000020706) #11	Adar (ENSRNOG00000020744) #12	Chrnb2 (ENSRNOG00000020778) #13	Ube2q1 (ENSRNOG00000020791) #14	She (ENSRNOG00000020797) #16	Il6r (ENSRNOG00000020811) #17	Atp8b2 (ENSRNOG00000020822) #18	Aqp10 (ENSRNOG00000069352) #19	Hax1 (ENSRNOG00000045647) #20	Ubap2l (ENSRNOG00000017990) #21	Ns5atp4 (ENSRNOG00000017758) #22	Cfap141 (ENSRNOG00000037406)	Tpm3 (ENSRNOG00000017441) ##23	Nup210l (ENSRNOG00000055790) #25	Rps27 (ENSRNOG00000016961) ##26	Rab13 (ENSRNOG00000016733) #27	Jtb (ENSRNOG00000016379) #28	Creb3l4 (ENSRNOG00000023493) #29	Slc39a1 (ENSRNOG00000059463) #30	Dennd4b (ENSRNOG00000022373) #32	Crtc2 (ENSRNOG00000056337) #31	Gatad2b (ENSRNOG00000015553) #33	Slc27a3 (ENSRNOG00000015421) #34	Ints3 (ENSRNOG00000015153) #35	ENSRNOG00000063260	Npr1 (ENSRNOG00000014684)
Rat	MODERN SPECIES	13	Cacnb4 (ENSRNOG00000007666)	Arl5a (ENSRNOG00000006839)	AABR07052125.1 (ENSRNOG00000006829)	Neb (ENSRNOG00000006783)	Rif1 (ENSRNOG00000054901)	ENSRNOG00000071171	Tnfaip6 (ENSRNOG00000050792)	Nmi (ENSRNOG00000027502)	Tas2r134 (ENSRNOG00000027510)	Rnd3 (ENSRNOG00000004624)	LOC499796 (ENSRNOG00000028112)	Mmadhc (ENSRNOG00000004740)	Hnrnpa1-ps20 (ENSRNOG00000005951)	LOC120101547 (ENSRNOG00000048601)	Lypd6 (ENSRNOG00000068044)	Ns5atp4-ps3 (ENSRNOG00000027533) #22	Lypd6b (ENSRNOG00000004614)	Kif5c (ENSRNOG00000004680)	Epc2 (ENSRNOG00000029447)	Mbd5 (ENSRNOG00000027596)	Orc4 (ENSRNOG00000005021)	Acvr2a (ENSRNOG00000005334)	ENSRNOG00000062624	ENSRNOG00000067798	Zeb2 (ENSRNOG00000004677)	Gtdc1 (ENSRNOG00000031038)	Arhgap15 (ENSRNOG00000031168)	Kynu (ENSRNOG00000029993)	Lrp1b (ENSRNOG00000030243)	LOC100362366 (ENSRNOG00000028690)	AABR07051831.1 (ENSRNOG00000015854)
Mus	ANCESTRAL SPECIES	7	ENSGT00390000007266	ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.y ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223
Shrew mouse	MODERN SPECIES	17	Lenep (MGP_PahariEiJ_G0026652)	Cks1b (MGP_PahariEiJ_G0026653)	Shc1 (MGP_PahariEiJ_G0026654)	Pygo2 (MGP_PahariEiJ_G0026655) #7	Pbxip1 (MGP_PahariEiJ_G0026656)	Pmvk (MGP_PahariEiJ_G0026657) #10	Kcnn3 (MGP_PahariEiJ_G0026658) #11	Adar (MGP_PahariEiJ_G0026659) #12	MGP_PahariEiJ_G0026660 #13	Ube2q1 (MGP_PahariEiJ_G0026661) #14	She (MGP_PahariEiJ_G0026662) #16	Il6ra (MGP_PahariEiJ_G0026663) #17	Atp8b2 (MGP_PahariEiJ_G0026664) #18	MGP_PahariEiJ_G0026665 #20	Ubap2l (MGP_PahariEiJ_G0026666) #21	MGP_PahariEiJ_G0026667 #22	MGP_PahariEiJ_G0026668 ##23	Nup210l (MGP_PahariEiJ_G0026669) #25	MGP_PahariEiJ_G0026670 ##26	Rab13 (MGP_PahariEiJ_G0026671) #27	Jtb (MGP_PahariEiJ_G0026672) #28	Creb3l4 (MGP_PahariEiJ_G0026673) #29	Slc39a1 (MGP_PahariEiJ_G0026674) #30	Crtc2 (MGP_PahariEiJ_G0026675) #31	Dennd4b (MGP_PahariEiJ_G0026676) #32	Gatad2b (MGP_PahariEiJ_G0026677) #33	Slc27a3 (MGP_PahariEiJ_G0026678) #34	Ints3 (MGP_PahariEiJ_G0026679) #35	MGP_PahariEiJ_G0026680	Ilf2 (MGP_PahariEiJ_G0026681)	Snapin (MGP_PahariEiJ_G0026682)
Mus_A	ANCESTRAL SPECIES	9	ENSGT00390000007266	ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT01030000234542.b.a.a.a.b.b ##23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.y ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223
Mus_B	ANCESTRAL SPECIES	8	ENSGT00390000007266	ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.b.a ##26	ENSGT00950000182891.a.a.b.a.b.b.b #26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223
Mouse	MODERN SPECIES	12	Flad1 (ENSMUSG00000042642)	Cks1b (ENSMUSG00000028044)	Shc1 (ENSMUSG00000042626)	Pygo2 (ENSMUSG00000047824) #7	Pbxip1 (ENSMUSG00000042613)	Pmvk (ENSMUSG00000027952) #10	Kcnn3 (ENSMUSG00000000794) #11	Adar (ENSMUSG00000027951) #12	Chrnb2 (ENSMUSG00000027950) #13	Ube2q1 (ENSMUSG00000042572) #14	She (ENSMUSG00000046280) #16	Il6ra (ENSMUSG00000027947) #17	Atp8b2 (ENSMUSG00000060671) #18	Hax1 (ENSMUSG00000027944) #20	Ubap2l (ENSMUSG00000042520) #21	4933434E20Rik (ENSMUSG00000027942) #22	Cfap141 (ENSMUSG00000118506)	Tpm3 (ENSMUSG00000027940) #23	Nup210l (ENSMUSG00000027939) #25	Rps27 (ENSMUSG00000090733) ##26	Rab13 (ENSMUSG00000027935) #27	Jtb (ENSMUSG00000027937) #28	Creb3l4 (ENSMUSG00000027938) #29	Slc39a1 (ENSMUSG00000052310) #30	Crtc2 (ENSMUSG00000027936) #31	Dennd4b (ENSMUSG00000042404) #32	Gatad2b (ENSMUSG00000042390) #33	Slc27a3 (ENSMUSG00000027932) #34	Ints3 (ENSMUSG00000027933) #35	Npr1 (ENSMUSG00000027931)	Ilf2 (ENSMUSG00000001016)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00390000007266	ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.b.b #26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223	ENSGT00940000154879
Steppe mouse	MODERN SPECIES	3110	ENSMSIG00000026965	Shc1 (ENSMSIG00000026983)	Pygo2 (ENSMSIG00000027012) #7	Pbxip1 (ENSMSIG00000027031)	Pmvk (ENSMSIG00000027047) #10	Kcnn3 (ENSMSIG00000027072) #11	Adar (ENSMSIG00000027077) #12	ENSMSIG00000027130 #13	ENSMSIG00000027143	Ube2q1 (ENSMSIG00000027148) #14	She (ENSMSIG00000027176) #16	Il6ra (ENSMSIG00000027228) #17	Atp8b2 (ENSMSIG00000027245) #18	Hax1 (ENSMSIG00000027302) #20	Ubap2l (ENSMSIG00000027332) #21	4933434E20Rik (ENSMSIG00000027489) #22	Cfap141 (ENSMSIG00000027585)	Tpm3 (ENSMSIG00000027597) #23	Nup210l (ENSMSIG00000027707) #25	ENSMSIG00000027767 #26	ENSMSIG00000027788 #27	Jtb (ENSMSIG00000027805) #28	Creb3l4 (ENSMSIG00000027822) #29	ENSMSIG00000027832 #31	Dennd4b (ENSMSIG00000027848) #32	Gatad2b (ENSMSIG00000000207) #33	Slc27a3 (ENSMSIG00000000282) #34	Ints3 (ENSMSIG00000000363) #35	Npr1 (ENSMSIG00000000933)	Ilf2 (ENSMSIG00000001090)	Snapin (ENSMSIG00000001126)
Ryukyu mouse	MODERN SPECIES	12	Flad1 (MGP_CAROLIEiJ_G0025208)	MGP_CAROLIEiJ_G0025209	Shc1 (MGP_CAROLIEiJ_G0025210)	Pygo2 (MGP_CAROLIEiJ_G0025211) #7	Pbxip1 (MGP_CAROLIEiJ_G0025212)	Pmvk (MGP_CAROLIEiJ_G0025213) #10	Kcnn3 (MGP_CAROLIEiJ_G0025214) #11	Adar (MGP_CAROLIEiJ_G0025215) #12	MGP_CAROLIEiJ_G0025216 #13	Ube2q1 (MGP_CAROLIEiJ_G0025217) #14	She (MGP_CAROLIEiJ_G0025218) #16	Il6ra (MGP_CAROLIEiJ_G0025219) #17	Atp8b2 (MGP_CAROLIEiJ_G0025220) #18	Hax1 (MGP_CAROLIEiJ_G0025221) #20	Ubap2l (MGP_CAROLIEiJ_G0025222) #21	MGP_CAROLIEiJ_G0025223 #22	Tpm3-rs7 (MGP_CAROLIEiJ_G0025224) ##23	Nup210l (MGP_CAROLIEiJ_G0025225) #25	MGP_CAROLIEiJ_G0025226 ##26	Rab13 (MGP_CAROLIEiJ_G0025227) #27	Jtb (MGP_CAROLIEiJ_G0025228) #28	Creb3l4 (MGP_CAROLIEiJ_G0025229) #29	Slc39a1 (MGP_CAROLIEiJ_G0025230) #30	Crtc2 (MGP_CAROLIEiJ_G0025231) #31	Dennd4b (MGP_CAROLIEiJ_G0025232) #32	Gatad2b (MGP_CAROLIEiJ_G0025233) #33	Slc27a3 (MGP_CAROLIEiJ_G0025234) #34	Ints3 (MGP_CAROLIEiJ_G0025235) #35	Npr1 (MGP_CAROLIEiJ_G0025236)	Ilf2 (MGP_CAROLIEiJ_G0025237)	Snapin (MGP_CAROLIEiJ_G0025238)
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.y ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223	ENSGT00940000154879
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00390000007266	ENSGT00950000182971.B.b.c.a.b	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.y ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223	ENSGT00940000154879
Prairie vole	MODERN SPECIES	99	Flad1 (ENSMOCG00000021020)	Cks1b (ENSMOCG00000018757)	ENSMOCG00000021109	ENSMOCG00000013620 #7	Pbxip1 (ENSMOCG00000014289)	Pmvk (ENSMOCG00000019772) #10	Kcnn3 (ENSMOCG00000000459) #11	Adar (ENSMOCG00000018547) #12	Chrnb2 (ENSMOCG00000020688) #13	Ube2q1 (ENSMOCG00000007891) #14	She (ENSMOCG00000000437) #16	Il6ra (ENSMOCG00000000552) #17	Atp8b2 (ENSMOCG00000000840) #18	Hax1 (ENSMOCG00000003057) #20	Ubap2l (ENSMOCG00000015398) #21	4933434E20Rik (ENSMOCG00000016695) #22	Cfap141 (ENSMOCG00000002986)	Tpm3 (ENSMOCG00000017543) #23	Nup210l (ENSMOCG00000005456) #25	ENSMOCG00000002329 #26	Rab13 (ENSMOCG00000021448) #27	Jtb (ENSMOCG00000009598) #28	Creb3l4 (ENSMOCG00000016484) #29	ENSMOCG00000014154 #30	Crtc2 (ENSMOCG00000012139) #31	Dennd4b (ENSMOCG00000016756) #32	Gatad2b (ENSMOCG00000014982) #33	Slc27a3 (ENSMOCG00000018654) #34	Ints3 (ENSMOCG00000013737) #35	Npr1 (ENSMOCG00000003109)	Ilf2 (ENSMOCG00000016112)
Northern American deer mouse	MODERN SPECIES	19	Shc1 (ENSPEMG00000011338)	Pygo2 (ENSPEMG00000031296) #7	Pbxip1 (ENSPEMG00000008556)	Pmvk (ENSPEMG00000011929) #10	Kcnn3 (ENSPEMG00000019108) #11	ENSPEMG00000017450	Adar (ENSPEMG00000000814) #12	Chrnb2 (ENSPEMG00000015010) #13	ENSPEMG00000016011 #14	She (ENSPEMG00000026511) #16	Il6ra (ENSPEMG00000012201) #17	Atp8b2 (ENSPEMG00000017200) #18	ENSPEMG00000016049	Hax1 (ENSPEMG00000017453) #20	Ubap2l (ENSPEMG00000007855) #21	4933434E20Rik (ENSPEMG00000000559) #22	Cfap141 (ENSPEMG00000029478)	Tpm3 (ENSPEMG00000015470) #23	Nup210l (ENSPEMG00000012090) #25	ENSPEMG00000017728 ##26	Rab13 (ENSPEMG00000017353) #27	Jtb (ENSPEMG00000025697) #28	Creb3l4 (ENSPEMG00000016681) #29	Slc39a1 (ENSPEMG00000027157) #30	Crtc2 (ENSPEMG00000017679) #31	Dennd4b (ENSPEMG00000008335) #32	Gatad2b (ENSPEMG00000013374) #33	ENSPEMG00000003903	Slc27a3 (ENSPEMG00000010037) #34	Ints3 (ENSPEMG00000009736) #35	Npr1 (ENSPEMG00000018127)
Cricetinae	ANCESTRAL SPECIES	13	ENSGT00950000182971.B.b.d	ENSGT00950000182870.a.a.b	ENSGT00530000063948.a #7	ENSGT00940000162147	ENSGT00390000014801 #10	ENSGT00950000182904.a.a.a #11	ENSGT00940000157243 #12	ENSGT00940000158417.b #13	ENSGT00940000160166 #14	ENSGT00940000159107 #16	ENSGT00940000161919 #17	ENSGT00940000160804 #18	ENSGT00940000162648 #19	ENSGT00390000018324 #20	ENSGT00390000003453.b.b #21	ENSGT00510000047366 #22	ENSGT00510000048901	ENSGT01030000234542.b.a.a.b.a.b.l #23	ENSGT00390000009491.c #25	ENSGT00950000182891.a.a.b.a.b.a.y ##26	ENSGT00940000159989 #27	ENSGT00390000016136 #28	ENSGT00940000160806 #29	ENSGT00940000157062 #30	ENSGT00390000010652.B #31	ENSGT00940000160472 #32	ENSGT00390000004097.b #33	ENSGT00940000161073 #34	ENSGT00390000014184 #35	ENSGT00940000156223	ENSGT00940000154879
Golden Hamster	MODERN SPECIES	714	ENSMAUG00000011157	Shc1 (ENSMAUG00000019925)	Pygo2 (ENSMAUG00000008090) #7	Pbxip1 (ENSMAUG00000008503)	Pmvk (ENSMAUG00000008973) #10	Kcnn3 (ENSMAUG00000000673) #11	Adar (ENSMAUG00000015796) #12	Chrnb2 (ENSMAUG00000021538) #13	Ube2q1 (ENSMAUG00000009758) #14	She (ENSMAUG00000009880) #16	Il6ra (ENSMAUG00000011038) #17	Atp8b2 (ENSMAUG00000001174) #18	Hax1 (ENSMAUG00000009013) #20	ENSMAUG00000022268 #21	ENSMAUG00000003991 #21	4933434E20Rik (ENSMAUG00000001710) #22	Cfap141 (ENSMAUG00000002399)	Tpm3 (ENSMAUG00000015501) #23	Nup210l (ENSMAUG00000020701) #25	ENSMAUG00000017944 ##26	Rab13 (ENSMAUG00000015713) #27	Jtb (ENSMAUG00000006012) #28	Slc39a1 (ENSMAUG00000018122) #30	Dennd4b (ENSMAUG00000020876) #32	Gatad2b (ENSMAUG00000021214) #33	Slc27a3 (ENSMAUG00000009254) #34	Ints3 (ENSMAUG00000003190) #35	Npr1 (ENSMAUG00000011600)	Ilf2 (ENSMAUG00000013875)	Snapin (ENSMAUG00000008480)	Chtop (ENSMAUG00000018496)
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	352	Cks1b (ENSCGRG00001007482)	Shc1 (ENSCGRG00001020387)	Pygo2 (ENSCGRG00001001671) #7	Pbxip1 (ENSCGRG00001021803)	Pmvk (ENSCGRG00001011237) #10	Kcnn3 (ENSCGRG00001007060) #11	Adar (ENSCGRG00001013419) #12	Chrnb2 (ENSCGRG00001000525) #13	Ube2q1 (ENSCGRG00001022706) #14	She (ENSCGRG00001017032) #16	Il6ra (ENSCGRG00001022987) #17	Atp8b2 (ENSCGRG00001011569) #18	ENSCGRG00001005547 #19	ENSCGRG00001023646 #20	ENSCGRG00001012946 #21	4933434E20Rik (ENSCGRG00001018378) #22	Cfap141 (ENSCGRG00001014550)	Tpm3 (ENSCGRG00001019752) #23	Nup210l (ENSCGRG00001002603) #25	ENSCGRG00001000391 ##26	Rab13 (ENSCGRG00001021505) #27	Jtb (ENSCGRG00001016269) #28	Creb3l4 (ENSCGRG00001008711) #29	Slc39a1 (ENSCGRG00001011734) #30	Crtc2 (ENSCGRG00001011316) #31	Dennd4b (ENSCGRG00001001735) #32	Gatad2b (ENSCGRG00001023947) #33	Slc27a3 (ENSCGRG00001015294) #34	Ints3 (ENSCGRG00001024236) #35	Npr1 (ENSCGRG00001000326)	ENSCGRG00001009622
Chinese hamster chok1gshd	MODERN SPECIES	1	Col6a3 (ENSCGRG00001024539)	ENSCGRG00001024654	Rbm44 (ENSCGRG00001001293)	Ramp1 (ENSCGRG00001024580)	ENSCGRG00001010672	Scly (ENSCGRG00001024710)	Espnl (ENSCGRG00001024719)	Klhl30 (ENSCGRG00001024698)	Erfe (ENSCGRG00001003481)	Ilkap (ENSCGRG00001007174)	Hes6 (ENSCGRG00001024376)	Per2 (ENSCGRG00001006630)	ENSCGRG00001000697	Traf3ip1 (ENSCGRG00001006330)	Asb1 (ENSCGRG00001024723)	ENSCGRG00001024677 #22	Twist2 (ENSCGRG00001010705)	Hdac4 (ENSCGRG00001003116)	Ndufa10 (ENSCGRG00001000771)	Or6b2 (ENSCGRG00001010619)	Or6b2b (ENSCGRG00001010498)	Or6b3 (ENSCGRG00001009820)	Or9s23 (ENSCGRG00001010591)	ENSCGRG00001024695	Or9s27 (ENSCGRG00001010630)	ENSCGRG00001009865	Or9s14 (ENSCGRG00001024692)	ENSCGRG00001010578	ENSCGRG00001004954	Otos (ENSCGRG00001024726)	Gpc1 (ENSCGRG00001010716)