Glires ANCESTRAL SPECIES ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT01030000234542.b.a.a.a.b.b ##24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a #29 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 Rodentia ANCESTRAL SPECIES ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT01030000234542.b.a.a.a.b.b ##24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a #29 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 Rodentia_A ANCESTRAL SPECIES ENSGT00950000182971.B.b.c.a.b #7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT01030000234542.b.a.a.a.b.b ##24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a #29 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 Sciuridae ANCESTRAL SPECIES ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.b.b #31 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000157062 #35 ENSGT00940000160806 #34 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES CKS1B (ENSSVLG00005015746) #7 SHC1 (ENSSVLG00005015630) #8 PYGO2 (ENSSVLG00005015559) #9 PBXIP1 (ENSSVLG00005015475) #10 PMVK (ENSSVLG00005015430) #11 KCNN3 (ENSSVLG00005015083) #12 ADAR (ENSSVLG00005014799) #13 CHRNB2 (ENSSVLG00005014638) #14 UBE2Q1 (ENSSVLG00005014507) #15 SHE (ENSSVLG00005014400) #16 IL6R (ENSSVLG00005014351) #17 ATP8B2 (ENSSVLG00005014269) #18 AQP10 (ENSSVLG00005014066) #19 ENSSVLG00005013980 #20 UBAP2L (ENSSVLG00005013768) #21 C1orf43 (ENSSVLG00005013372) #22 CFAP141 (ENSSVLG00005013145) #23 ENSSVLG00005012292 #24 ENSSVLG00005011990 #25 ENSSVLG00005011949 #26 ENSSVLG00005011935 #27 ENSSVLG00005011875 #28 RPS27 (ENSSVLG00005011813) #29 ENSSVLG00005011603 #30 ENSSVLG00005011534 #31 RAB13 (ENSSVLG00005011364) #32 ENSSVLG00005011332 #33 CREB3L4 (ENSSVLG00005011183) #34 SLC39A1 (ENSSVLG00005011031) #35 CRTC2 (ENSSVLG00005010882) #36 DENND4B (ENSSVLG00005010822) #37 Eurasian red squirrel MODERN SPECIES 156 ENSSVLG00005017948 AGTR2 (ENSSVLG00005017968) ENSSVLG00005017980 PLS3 (ENSSVLG00005018046) ENSSVLG00005018340 ENSSVLG00005018369 LRCH2 (ENSSVLG00005018464) IL13RA2 (ENSSVLG00005018862) ENSSVLG00005018928 HTR2C (ENSSVLG00005018984) ENSSVLG00005019077 ENSSVLG00005019126 ENSSVLG00005019177 ENSSVLG00005019228 ENSSVLG00005019275 ENSSVLG00005019330 ##22 AMOT (ENSSVLG00005013525) LHFPL1 (ENSSVLG00005013627) ENSSVLG00005013685 ENSSVLG00005013733 RTL4 (ENSSVLG00005013764) TRPC5 (ENSSVLG00005013851) TRPC5OS (ENSSVLG00005013928) ENSSVLG00005013966 ENSSVLG00005014045 ALG13 (ENSSVLG00005014257) ENSSVLG00005014968 SERTM2 (ENSSVLG00005015020) DCX (ENSSVLG00005015055) CAPN6 (ENSSVLG00005015179) PAK3 (ENSSVLG00005015386) Marmotini ANCESTRAL SPECIES 33 ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT01030000234542.b.a.a.a.b.b ##24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a #29 ENSGT00950000182891.a.a.b.a.b.b.b #31 ENSGT00940000159989 #32 ENSGT00390000016136.j ENSGT00940000160806.b #34 ENSGT00940000160806.a.a #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 Marmotini_b ANCESTRAL SPECIES 37 ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a #29 ENSGT00940000159989 #32 ENSGT00390000016136.j ENSGT00940000160806.a.a #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 Squirrel DUPLICATION Squirrel MODERN SPECIES 35 ENSSTOG00000033786 #22 Squirrel MODERN SPECIES 282 DSC2 (ENSSTOG00000010425) DSC1 (ENSSTOG00000010444) DSG1 (ENSSTOG00000010463) DSG4 (ENSSTOG00000010492) DSG2 (ENSSTOG00000007528) TTR (ENSSTOG00000007541) B4GALT6 (ENSSTOG00000010911) ENSSTOG00000033707 #22 TRAPPC8 (ENSSTOG00000012656) RNF125 (ENSSTOG00000022555) RNF138 (ENSSTOG00000002293) MEP1B (ENSSTOG00000002298) GAREM1 (ENSSTOG00000002308) KLHL14 (ENSSTOG00000016263) Squirrel MODERN SPECIES 33 ENSSTOG00000031916 #22 Squirrel MODERN SPECIES 180 CKS1B (ENSSTOG00000031911) ##7 SHC1 (ENSSTOG00000000050) #8 PYGO2 (ENSSTOG00000000053) #9 PBXIP1 (ENSSTOG00000026941) #10 PMVK (ENSSTOG00000003639) #11 KCNN3 (ENSSTOG00000026978) #12 ADAR (ENSSTOG00000014151) #13 CHRNB2 (ENSSTOG00000026442) #14 UBE2Q1 (ENSSTOG00000003400) #15 SHE (ENSSTOG00000009301) #16 IL6R (ENSSTOG00000009285) #17 ATP8B2 (ENSSTOG00000014623) #18 AQP10 (ENSSTOG00000014619) #19 HAX1 (ENSSTOG00000014614) #20 UBAP2L (ENSSTOG00000014589) #21 ENSSTOG00000029834 #22 CFAP141 (ENSSTOG00000014580) #23 ENSSTOG00000023525 #24 NUP210L (ENSSTOG00000014542) #25 ENSSTOG00000032447 #31 RAB13 (ENSSTOG00000011222) #32 ENSSTOG00000014348 CREB3L4 (ENSSTOG00000014516) #34 SLC39A1 (ENSSTOG00000001572) #35 CRTC2 (ENSSTOG00000027219) #36 DENND4B (ENSSTOG00000010539) #37 GATAD2B (ENSSTOG00000005407) SLC27A3 (ENSSTOG00000020359) INTS3 (ENSSTOG00000000670) NPR1 (ENSSTOG00000022009) ENSSTOG00000000667 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 3 EPC2 (ENSUPAG00010004529) KIF5C (ENSUPAG00010004496) LYPD6B (ENSUPAG00010004479) LYPD6 (ENSUPAG00010004464) MMADHC (ENSUPAG00010004432) RND3 (ENSUPAG00010004413) ENSUPAG00010004396 ENSUPAG00010004388 RBM43 (ENSUPAG00010004382) NMI (ENSUPAG00010004358) TNFAIP6 (ENSUPAG00010004346) RIF1 (ENSUPAG00010002377) NEB (ENSUPAG00010001764) ENSUPAG00010001737 CACNB4 (ENSUPAG00010001584) ENSUPAG00010001568 #22 STAM2 (ENSUPAG00010001468) FMNL2 (ENSUPAG00010000658) PRPF40A (ENSUPAG00010000254) ARL6IP6 (ENSUPAG00010000239) Arctic ground squirrel MODERN SPECIES 566 HAX1 (ENSUPAG00010013917) #20 UBAP2L (ENSUPAG00010013962) #21 ENSUPAG00010014744 #22 CFAP141 (ENSUPAG00010014782) #23 TPM3 (ENSUPAG00010014794) ##24 NUP210L (ENSUPAG00010014983) #25 RPS27 (ENSUPAG00010015110) #29 RAB13 (ENSUPAG00010015124) #32 JTB (ENSUPAG00010015137) ENSUPAG00010015154 #34 SLC39A1 (ENSUPAG00010015164) #35 CRTC2 (ENSUPAG00010015170) #36 DENND4B (ENSUPAG00010015204) #37 GATAD2B (ENSUPAG00010015294) SLC27A3 (ENSUPAG00010015351) INTS3 (ENSUPAG00010015361) NPR1 (ENSUPAG00010015422) ILF2 (ENSUPAG00010015468) Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 5 MMADHC (ENSMMMG00000021733) RND3 (ENSMMMG00000021746) ENSMMMG00000021752 ENSMMMG00000021771 ENSMMMG00000021776 ENSMMMG00000021801 RBM43 (ENSMMMG00000021824) NMI (ENSMMMG00000021825) ENSMMMG00000021827 TNFAIP6 (ENSMMMG00000021834) RIF1 (ENSMMMG00000021851) NEB (ENSMMMG00000021921) ENSMMMG00000022061 CACNB4 (ENSMMMG00000022074) STAM2 (ENSMMMG00000022104) ENSMMMG00000022120 #22 FMNL2 (ENSMMMG00000022132) PRPF40A (ENSMMMG00000022291) ARL6IP6 (ENSMMMG00000022320) ENSMMMG00000022335 ENSMMMG00000022338 ENSMMMG00000022342 ENSMMMG00000022354 KCNJ3 (ENSMMMG00000022368) NR4A2 (ENSMMMG00000022388) GPD2 (ENSMMMG00000022395) ENSMMMG00000022423 ENSMMMG00000022427 ERMN (ENSMMMG00000022432) CYTIP (ENSMMMG00000022447) ACVR1C (ENSMMMG00000022458) Alpin marmot MODERN SPECIES 85 ENSMMMG00000017079 #8 PYGO2 (ENSMMMG00000017091) #9 PBXIP1 (ENSMMMG00000017093) #10 ENSMMMG00000017115 #11 KCNN3 (ENSMMMG00000017128) #12 ENSMMMG00000017139 ADAR (ENSMMMG00000017145) #13 CHRNB2 (ENSMMMG00000017189) #14 UBE2Q1 (ENSMMMG00000017197) #15 SHE (ENSMMMG00000017208) #16 IL6R (ENSMMMG00000017215) #17 ATP8B2 (ENSMMMG00000017287) #18 AQP10 (ENSMMMG00000017359) #19 HAX1 (ENSMMMG00000017363) #20 UBAP2L (ENSMMMG00000017401) #21 ENSMMMG00000017556 #22 TPM3 (ENSMMMG00000017605) ##24 ENSMMMG00000017625 #25 ENSMMMG00000017632 #25 ENSMMMG00000017652 #31 RAB13 (ENSMMMG00000017661) #32 ENSMMMG00000017675 ENSMMMG00000017685 #34 ENSMMMG00000017690 #34 SLC39A1 (ENSMMMG00000017691) #35 CRTC2 (ENSMMMG00000017698) #36 DENND4B (ENSMMMG00000017709) #37 GATAD2B (ENSMMMG00000017734) SLC27A3 (ENSMMMG00000017745) INTS3 (ENSMMMG00000017913) NPR1 (ENSMMMG00000017990) Alpin marmot MODERN SPECIES 12 YOD1 (ENSMMMG00000003106) PFKFB2 (ENSMMMG00000002404) C4BPB (ENSMMMG00000002378) C4BPA (ENSMMMG00000002369) ENSMMMG00000002134 ENSMMMG00000002084 ENSMMMG00000002053 ENSMMMG00000001930 CR2 (ENSMMMG00000001798) ENSMMMG00000001760 ENSMMMG00000001729 ENSMMMG00000001683 ENSMMMG00000001666 CD34 (ENSMMMG00000001505) PLXNA2 (ENSMMMG00000001414) ENSMMMG00000001390 #22 CAMK1G (ENSMMMG00000001301) LAMB3 (ENSMMMG00000001176) G0S2 (ENSMMMG00000001164) HSD11B1 (ENSMMMG00000001148) TRAF3IP3 (ENSMMMG00000001053) C1orf74 (ENSMMMG00000001035) IRF6 (ENSMMMG00000001014) UTP25 (ENSMMMG00000000999) SYT14 (ENSMMMG00000000958) SERTAD4 (ENSMMMG00000000936) HHAT (ENSMMMG00000000889) KCNH1 (ENSMMMG00000000821) RCOR3 (ENSMMMG00000000787) TRAF5 (ENSMMMG00000000707) RD3 (ENSMMMG00000000691) Hystricomorpha ANCESTRAL SPECIES 45 ENSGT00950000182971.B.b.c.a.b #7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT01030000234542.b.a.a.a.b.b ##24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a #29 ENSGT00940000159989.f #32 ENSGT00950000182891.a.a.b.a.b.b.a ##29 ENSGT00940000159989.e #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 10 PYGO2 (ENSHGLG00000007163) #9 PBXIP1 (ENSHGLG00000008141) #10 PMVK (ENSHGLG00000009156) #11 KCNN3 (ENSHGLG00000015775) #12 ENSHGLG00000021095 ADAR (ENSHGLG00000017910) #13 CHRNB2 (ENSHGLG00000007150) #14 ENSHGLG00000007304 #15 ENSHGLG00000035218 #16 IL6R (ENSHGLG00000032250) #17 ATP8B2 (ENSHGLG00000018554) #18 AQP10 (ENSHGLG00000018126) #19 ENSHGLG00000018499 HAX1 (ENSHGLG00000018827) #20 UBAP2L (ENSHGLG00000009352) #21 ENSHGLG00000043186 #22 CFAP141 (ENSHGLG00000034346) #23 ENSHGLG00000035415 #24 ENSHGLG00000010502 ##24 NUP210L (ENSHGLG00000039681) #25 RPS27 (ENSHGLG00000007748) #29 RAB13 (ENSHGLG00000008749) #32 JTB (ENSHGLG00000040053) CREB3L4 (ENSHGLG00000033275) #34 SLC39A1 (ENSHGLG00000007034) #35 CRTC2 (ENSHGLG00000008041) #36 DENND4B (ENSHGLG00000006184) #37 ENSHGLG00000015467 ENSHGLG00000034978 ENSHGLG00000038740 ENSHGLG00000046497 Naked mole-rat female MODERN SPECIES 27 HPSE (ENSHGLG00000018930) HELQ (ENSHGLG00000019137) ENSHGLG00000036989 ENSHGLG00000036220 ENSHGLG00000037131 Gpat3 (ENSHGLG00000003421) ENSHGLG00000043322 ENSHGLG00000045281 ENSHGLG00000037327 ENSHGLG00000035706 ENSHGLG00000004204 ENSHGLG00000004589 CDS1 (ENSHGLG00000049384) WDFY3 (ENSHGLG00000002966) ENSHGLG00000041678 ENSHGLG00000000796 #22 ENSHGLG00000000768 ENSHGLG00000019846 ENSHGLG00000001024 ENSHGLG00000000901 ENSHGLG00000046052 ENSHGLG00000034553 ENSHGLG00000019806 ENSHGLG00000005605 ENSHGLG00000001145 SLC10A6 (ENSHGLG00000001287) ENSHGLG00000001308 ENSHGLG00000045541 AFF1 (ENSHGLG00000001384) ENSHGLG00000008155 ENSHGLG00000032120 Naked mole-rat female MODERN SPECIES 23 DHX57 (ENSHGLG00000015212) ENSHGLG00000005484 ARHGEF33 (ENSHGLG00000007085) SOS1 (ENSHGLG00000008560) ENSHGLG00000045652 CDKL4 (ENSHGLG00000044538) MAP4K3 (ENSHGLG00000018638) ENSHGLG00000037179 ENSHGLG00000038781 ENSHGLG00000051001 ENSHGLG00000019145 ENSHGLG00000046900 ENSHGLG00000042007 ENSHGLG00000015079 ENSHGLG00000015808 ENSHGLG00000044522 #22 ENSHGLG00000038868 ENSHGLG00000046799 ENSHGLG00000039075 ENSHGLG00000007285 ENSHGLG00000009421 COX7A2L (ENSHGLG00000050207) KCNG3 (ENSHGLG00000050660) ENSHGLG00000032595 Mta3 (ENSHGLG00000013809) ENSHGLG00000033761 HAAO (ENSHGLG00000042032) ZFP36L2 (ENSHGLG00000035572) THADA (ENSHGLG00000005656) PLEKHH2 (ENSHGLG00000007771) ENSHGLG00000012261 Hystricomorpha_a ANCESTRAL SPECIES 54 ENSGT00950000182971.B.b.c.a.b #7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.a.b.b ##24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a #29 ENSGT00940000159989.f #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 Guinea pig MODERN SPECIES 10 PYGO2 (ENSCPOG00000038298) #9 PBXIP1 (ENSCPOG00000005112) #10 PMVK (ENSCPOG00000006036) #11 KCNN3 (ENSCPOG00000015718) #12 ENSCPOG00000020156 #14 ADAR (ENSCPOG00000005463) #13 ENSCPOG00000013155 #14 UBE2Q1 (ENSCPOG00000001472) #15 SHE (ENSCPOG00000001163) #16 IL6R (ENSCPOG00000033327) #17 ENSCPOG00000037176 ATP8B2 (ENSCPOG00000014022) #18 AQP10 (ENSCPOG00000039313) #19 HAX1 (ENSCPOG00000007307) #20 ENSCPOG00000021439 #21 C1orf43 (ENSCPOG00000006131) #22 CFAP141 (ENSCPOG00000039253) #23 TPM3 (ENSCPOG00000032186) ##24 ENSCPOG00000007264 #25 ENSCPOG00000024660 ##29 RAB13 (ENSCPOG00000011491) #32 JTB (ENSCPOG00000012906) CREB3L4 (ENSCPOG00000034503) #34 SLC39A1 (ENSCPOG00000039162) #35 CRTC2 (ENSCPOG00000012884) #36 DENND4B (ENSCPOG00000012910) #37 GATAD2B (ENSCPOG00000010326) SLC27A3 (ENSCPOG00000009466) INTS3 (ENSCPOG00000009450) NPR1 (ENSCPOG00000025084) ILF2 (ENSCPOG00000005835) Hystricomorpha_b ANCESTRAL SPECIES 61 ENSGT00950000182971.B.b.c.a.b #7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.a.b.b ##24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a #29 ENSGT00940000159989.f #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 252 SHC1 (ENSCLAG00000005022) #8 PYGO2 (ENSCLAG00000004985) #9 PBXIP1 (ENSCLAG00000004914) #10 PMVK (ENSCLAG00000004787) #11 KCNN3 (ENSCLAG00000004330) #12 ADAR (ENSCLAG00000005402) #13 CHRNB2 (ENSCLAG00000005132) #14 UBE2Q1 (ENSCLAG00000005048) #15 SHE (ENSCLAG00000004987) #16 ENSCLAG00000004750 IL6R (ENSCLAG00000004093) #17 ATP8B2 (ENSCLAG00000003593) #18 AQP10 (ENSCLAG00000004886) #19 ENSCLAG00000004829 #20 UBAP2L (ENSCLAG00000003903) #21 ENSCLAG00000012981 #22 CFAP141 (ENSCLAG00000011799) #23 TPM3 (ENSCLAG00000010440) ##24 NUP210L (ENSCLAG00000007281) #25 RPS27 (ENSCLAG00000006809) #29 RAB13 (ENSCLAG00000006603) #32 JTB (ENSCLAG00000009842) CREB3L4 (ENSCLAG00000008566) #34 SLC39A1 (ENSCLAG00000008243) #35 CRTC2 (ENSCLAG00000007860) #36 DENND4B (ENSCLAG00000005313) #37 GATAD2B (ENSCLAG00000004814) SLC27A3 (ENSCLAG00000004445) INTS3 (ENSCLAG00000003620) NPR1 (ENSCLAG00000004130) SNAPIN (ENSCLAG00000003233) Long-tailed chinchilla MODERN SPECIES 58 ENSCLAG00000000055 #22 Degu DUPLICATION Degu MODERN SPECIES 73 CKS1B (ENSODEG00000011374) #7 SHC1 (ENSODEG00000011945) #8 PYGO2 (ENSODEG00000012415) #9 PBXIP1 (ENSODEG00000011532) #10 PMVK (ENSODEG00000011395) #11 KCNN3 (ENSODEG00000011444) #12 ADAR (ENSODEG00000011111) #13 CHRNB2 (ENSODEG00000011916) #14 ENSODEG00000020162 UBE2Q1 (ENSODEG00000012607) #15 SHE (ENSODEG00000010544) #16 ATP8B2 (ENSODEG00000010646) #18 ENSODEG00000010731 #20 ENSODEG00000011367 #21 ENSODEG00000012117 #21 ENSODEG00000011467 #22 CFAP141 (ENSODEG00000011475) #23 TPM3 (ENSODEG00000011815) ##24 NUP210L (ENSODEG00000011746) #25 ENSODEG00000012394 ##29 ENSODEG00000012634 #32 JTB (ENSODEG00000012805) CREB3L4 (ENSODEG00000013013) #34 SLC39A1 (ENSODEG00000012305) #35 CRTC2 (ENSODEG00000012430) #36 DENND4B (ENSODEG00000013675) #37 ENSODEG00000019967 GATAD2B (ENSODEG00000012298) SLC27A3 (ENSODEG00000012359) INTS3 (ENSODEG00000012581) NPR1 (ENSODEG00000013147) Degu MODERN SPECIES 84 ENSODEG00000019376 ENSODEG00000008690 ENSODEG00000019255 ENSODEG00000019220 BTD (ENSODEG00000006036) DNASE1L3 (ENSODEG00000006359) ENSODEG00000006739 FLNB (ENSODEG00000008526) SLMAP (ENSODEG00000005798) ENSODEG00000006496 ENSODEG00000019341 DENND6A (ENSODEG00000005908) ENSODEG00000006837 PDE12 (ENSODEG00000006268) ENSODEG00000006477 ENSODEG00000009106 #22 ENSODEG00000009554 ENSODEG00000019205 ENSODEG00000006288 ASB14 (ENSODEG00000005874) APPL1 (ENSODEG00000005753) ENSODEG00000008648 ENSODEG00000009148 ENSODEG00000007374 ARHGEF3 (ENSODEG00000007707) ENSODEG00000007518 ENSODEG00000008069 TASOR (ENSODEG00000006527) ENSODEG00000007286 CCDC66 (ENSODEG00000010465) ERC2 (ENSODEG00000006199) Rodentia_B ANCESTRAL SPECIES ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a #29 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 Kangaroo rat MODERN SPECIES 345 ENSDORG00000023152 ##7 Shc1 (ENSDORG00000003763) #8 Pbxip1 (ENSDORG00000003761) #10 Pmvk (ENSDORG00000026581) #11 Kcnn3 (ENSDORG00000027750) #12 Adar (ENSDORG00000007813) #13 Chrnb2 (ENSDORG00000007810) #14 Ube2q1 (ENSDORG00000007808) #15 She (ENSDORG00000007804) #16 Il6ra (ENSDORG00000014779) #17 Atp8b2 (ENSDORG00000008652) #18 ENSDORG00000008649 #19 ENSDORG00000012587 #20 ENSDORG00000027500 #21 ENSDORG00000027148 #21 4933434E20Rik (ENSDORG00000005454) #22 Cfap141 (ENSDORG00000029641) #23 ENSDORG00000006208 ##24 ENSDORG00000023795 ##29 Nup210l (ENSDORG00000001594) #25 ENSDORG00000001593 #31 Rab13 (ENSDORG00000001591) #32 Jtb (ENSDORG00000028390) Creb3l4 (ENSDORG00000011769) #34 Slc39a1 (ENSDORG00000027137) #35 Crtc2 (ENSDORG00000011766) #36 Dennd4b (ENSDORG00000011762) #37 ENSDORG00000028146 Gatad2b (ENSDORG00000013431) Slc27a3 (ENSDORG00000001476) Ints3 (ENSDORG00000001484) Myomorpha ANCESTRAL SPECIES 12 ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a #29 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 Lesser Egyptian jerboa MODERN SPECIES 141 Cks1b (ENSJJAG00000000355) ##7 Shc1 (ENSJJAG00000014070) #8 Pygo2 (ENSJJAG00000011008) #9 Pbxip1 (ENSJJAG00000011330) #10 Pmvk (ENSJJAG00000013837) #11 Kcnn3 (ENSJJAG00000007766) #12 Adar (ENSJJAG00000022056) #13 Chrnb2 (ENSJJAG00000020105) #14 Ube2q1 (ENSJJAG00000011804) #15 She (ENSJJAG00000009909) #16 ENSJJAG00000023975 #18 ENSJJAG00000023267 #18 ENSJJAG00000023866 #19 Hax1 (ENSJJAG00000020120) #20 Ubap2l (ENSJJAG00000021524) #21 4933434E20Rik (ENSJJAG00000004208) #22 Cfap141 (ENSJJAG00000015562) #23 Tpm3 (ENSJJAG00000017959) #24 Nup210l (ENSJJAG00000010321) #25 ENSJJAG00000019594 ##29 Rab13 (ENSJJAG00000010575) #32 Jtb (ENSJJAG00000002705) Creb3l4 (ENSJJAG00000010946) #34 Slc39a1 (ENSJJAG00000022954) #35 Crtc2 (ENSJJAG00000009825) #36 Dennd4b (ENSJJAG00000002150) #37 Gatad2b (ENSJJAG00000024336) Slc27a3 (ENSJJAG00000024298) Ints3 (ENSJJAG00000019885) Npr1 (ENSJJAG00000021087) ENSJJAG00000023269 Muroidea ANCESTRAL SPECIES 6 ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a #29 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 Upper Galilee mountains blind mole rat MODERN SPECIES 497 Flad1 (ENSNGAG00000019467) Cks1b (ENSNGAG00000021059) ##7 Shc1 (ENSNGAG00000000764) #8 Pygo2 (ENSNGAG00000001061) #9 Pbxip1 (ENSNGAG00000001561) #10 Pmvk (ENSNGAG00000009702) #11 Kcnn3 (ENSNGAG00000012664) #12 Adar (ENSNGAG00000016696) #13 Chrnb2 (ENSNGAG00000007991) #14 Ube2q1 (ENSNGAG00000010765) #15 She (ENSNGAG00000011383) #16 Il6ra (ENSNGAG00000013306) #17 Atp8b2 (ENSNGAG00000016615) #18 Hax1 (ENSNGAG00000000939) #20 ENSNGAG00000022133 #21 4933434E20Rik (ENSNGAG00000023898) #22 Cfap141 (ENSNGAG00000006314) #23 Tpm3 (ENSNGAG00000022391) #24 Nup210l (ENSNGAG00000005884) #25 Rps27 (ENSNGAG00000005823) ##29 Rab13 (ENSNGAG00000010309) #32 ENSNGAG00000011293 Creb3l4 (ENSNGAG00000013822) #34 ENSNGAG00000017607 #35 Crtc2 (ENSNGAG00000018956) #36 Dennd4b (ENSNGAG00000021805) #37 Gatad2b (ENSNGAG00000020296) Slc27a3 (ENSNGAG00000021835) Ints3 (ENSNGAG00000023917) Npr1 (ENSNGAG00000011425) Ilf2 (ENSNGAG00000012145) Muroidea_A ANCESTRAL SPECIES 5 ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a.y #29 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 Murinae ANCESTRAL SPECIES 5 ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT01030000234542.b.a.a.a.b.b ##24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a.y #29 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 Rat DUPLICATION Rat MODERN SPECIES 11 Cks1b (ENSRNOG00000042561) #7 Shc1 (ENSRNOG00000020657) #8 Pygo2 (ENSRNOG00000020663) #9 Pbxip1 (ENSRNOG00000020673) #10 Pmvk (ENSRNOG00000020696) #11 Kcnn3 (ENSRNOG00000020706) #12 Adar (ENSRNOG00000020744) #13 Chrnb2 (ENSRNOG00000020778) #14 Ube2q1 (ENSRNOG00000020791) #15 She (ENSRNOG00000020797) #16 Il6r (ENSRNOG00000020811) #17 Atp8b2 (ENSRNOG00000020822) #18 Aqp10 (ENSRNOG00000069352) #19 Hax1 (ENSRNOG00000045647) #20 Ubap2l (ENSRNOG00000017990) #21 Ns5atp4 (ENSRNOG00000017758) #22 Cfap141 (ENSRNOG00000037406) #23 Tpm3 (ENSRNOG00000017441) ##24 Nup210l (ENSRNOG00000055790) #25 Rps27 (ENSRNOG00000016961) #29 Rab13 (ENSRNOG00000016733) #32 Jtb (ENSRNOG00000016379) Creb3l4 (ENSRNOG00000023493) #34 Slc39a1 (ENSRNOG00000059463) #35 Dennd4b (ENSRNOG00000022373) #37 Crtc2 (ENSRNOG00000056337) #36 Gatad2b (ENSRNOG00000015553) Slc27a3 (ENSRNOG00000015421) Ints3 (ENSRNOG00000015153) ENSRNOG00000063260 Npr1 (ENSRNOG00000014684) Rat MODERN SPECIES 13 Cacnb4 (ENSRNOG00000007666) Arl5a (ENSRNOG00000006839) AABR07052125.1 (ENSRNOG00000006829) Neb (ENSRNOG00000006783) Rif1 (ENSRNOG00000054901) ENSRNOG00000071171 Tnfaip6 (ENSRNOG00000050792) Nmi (ENSRNOG00000027502) Tas2r134 (ENSRNOG00000027510) Rnd3 (ENSRNOG00000004624) LOC499796 (ENSRNOG00000028112) Mmadhc (ENSRNOG00000004740) Hnrnpa1-ps20 (ENSRNOG00000005951) LOC120101547 (ENSRNOG00000048601) Lypd6 (ENSRNOG00000068044) Ns5atp4-ps3 (ENSRNOG00000027533) #22 Lypd6b (ENSRNOG00000004614) Kif5c (ENSRNOG00000004680) Epc2 (ENSRNOG00000029447) Mbd5 (ENSRNOG00000027596) Orc4 (ENSRNOG00000005021) Acvr2a (ENSRNOG00000005334) ENSRNOG00000062624 ENSRNOG00000067798 Zeb2 (ENSRNOG00000004677) Gtdc1 (ENSRNOG00000031038) Arhgap15 (ENSRNOG00000031168) Kynu (ENSRNOG00000029993) Lrp1b (ENSRNOG00000030243) LOC100362366 (ENSRNOG00000028690) AABR07051831.1 (ENSRNOG00000015854) Mus ANCESTRAL SPECIES 7 ENSGT00390000007266 ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT01030000234542.b.a.a.a.b.b ##24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a.y #29 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 Shrew mouse MODERN SPECIES 17 Lenep (MGP_PahariEiJ_G0026652) Cks1b (MGP_PahariEiJ_G0026653) ##7 Shc1 (MGP_PahariEiJ_G0026654) #8 Pygo2 (MGP_PahariEiJ_G0026655) #9 Pbxip1 (MGP_PahariEiJ_G0026656) #10 Pmvk (MGP_PahariEiJ_G0026657) #11 Kcnn3 (MGP_PahariEiJ_G0026658) #12 Adar (MGP_PahariEiJ_G0026659) #13 MGP_PahariEiJ_G0026660 #14 Ube2q1 (MGP_PahariEiJ_G0026661) #15 She (MGP_PahariEiJ_G0026662) #16 Il6ra (MGP_PahariEiJ_G0026663) #17 Atp8b2 (MGP_PahariEiJ_G0026664) #18 MGP_PahariEiJ_G0026665 #20 Ubap2l (MGP_PahariEiJ_G0026666) #21 MGP_PahariEiJ_G0026667 #22 MGP_PahariEiJ_G0026668 ##24 Nup210l (MGP_PahariEiJ_G0026669) #25 MGP_PahariEiJ_G0026670 #29 Rab13 (MGP_PahariEiJ_G0026671) #32 Jtb (MGP_PahariEiJ_G0026672) Creb3l4 (MGP_PahariEiJ_G0026673) #34 Slc39a1 (MGP_PahariEiJ_G0026674) #35 Crtc2 (MGP_PahariEiJ_G0026675) #36 Dennd4b (MGP_PahariEiJ_G0026676) #37 Gatad2b (MGP_PahariEiJ_G0026677) Slc27a3 (MGP_PahariEiJ_G0026678) Ints3 (MGP_PahariEiJ_G0026679) MGP_PahariEiJ_G0026680 Ilf2 (MGP_PahariEiJ_G0026681) Snapin (MGP_PahariEiJ_G0026682) Mus_A ANCESTRAL SPECIES 9 ENSGT00390000007266 ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT01030000234542.b.a.a.a.b.b ##24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a.y #29 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 Mus_B ANCESTRAL SPECIES 8 ENSGT00390000007266 ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.b.a ##29 ENSGT00950000182891.a.a.b.a.b.b.b #31 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 Mouse MODERN SPECIES 12 Flad1 (ENSMUSG00000042642) Cks1b (ENSMUSG00000028044) #7 Shc1 (ENSMUSG00000042626) #8 Pygo2 (ENSMUSG00000047824) #9 Pbxip1 (ENSMUSG00000042613) #10 Pmvk (ENSMUSG00000027952) #11 Kcnn3 (ENSMUSG00000000794) #12 Adar (ENSMUSG00000027951) #13 Chrnb2 (ENSMUSG00000027950) #14 Ube2q1 (ENSMUSG00000042572) #15 She (ENSMUSG00000046280) #16 Il6ra (ENSMUSG00000027947) #17 Atp8b2 (ENSMUSG00000060671) #18 Hax1 (ENSMUSG00000027944) #20 Ubap2l (ENSMUSG00000042520) #21 4933434E20Rik (ENSMUSG00000027942) #22 Cfap141 (ENSMUSG00000118506) #23 Tpm3 (ENSMUSG00000027940) #24 Nup210l (ENSMUSG00000027939) #25 Rps27 (ENSMUSG00000090733) ##29 Rab13 (ENSMUSG00000027935) #32 Jtb (ENSMUSG00000027937) Creb3l4 (ENSMUSG00000027938) #34 Slc39a1 (ENSMUSG00000052310) #35 Crtc2 (ENSMUSG00000027936) #36 Dennd4b (ENSMUSG00000042404) #37 Gatad2b (ENSMUSG00000042390) Slc27a3 (ENSMUSG00000027932) Ints3 (ENSMUSG00000027933) Npr1 (ENSMUSG00000027931) Ilf2 (ENSMUSG00000001016) Mus_C ANCESTRAL SPECIES 6 ENSGT00390000007266 ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.b.b #31 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 Steppe mouse MODERN SPECIES 3110 ENSMSIG00000026965 ##7 Shc1 (ENSMSIG00000026983) #8 Pygo2 (ENSMSIG00000027012) #9 Pbxip1 (ENSMSIG00000027031) #10 Pmvk (ENSMSIG00000027047) #11 Kcnn3 (ENSMSIG00000027072) #12 Adar (ENSMSIG00000027077) #13 ENSMSIG00000027130 #14 ENSMSIG00000027143 Ube2q1 (ENSMSIG00000027148) #15 She (ENSMSIG00000027176) #16 Il6ra (ENSMSIG00000027228) #17 Atp8b2 (ENSMSIG00000027245) #18 Hax1 (ENSMSIG00000027302) #20 Ubap2l (ENSMSIG00000027332) #21 4933434E20Rik (ENSMSIG00000027489) #22 Cfap141 (ENSMSIG00000027585) #23 Tpm3 (ENSMSIG00000027597) #24 Nup210l (ENSMSIG00000027707) #25 ENSMSIG00000027767 #31 ENSMSIG00000027788 #32 Jtb (ENSMSIG00000027805) Creb3l4 (ENSMSIG00000027822) #34 ENSMSIG00000027832 #36 Dennd4b (ENSMSIG00000027848) #37 Gatad2b (ENSMSIG00000000207) Slc27a3 (ENSMSIG00000000282) Ints3 (ENSMSIG00000000363) Npr1 (ENSMSIG00000000933) Ilf2 (ENSMSIG00000001090) Snapin (ENSMSIG00000001126) Ryukyu mouse MODERN SPECIES 12 Flad1 (MGP_CAROLIEiJ_G0025208) MGP_CAROLIEiJ_G0025209 ##7 Shc1 (MGP_CAROLIEiJ_G0025210) #8 Pygo2 (MGP_CAROLIEiJ_G0025211) #9 Pbxip1 (MGP_CAROLIEiJ_G0025212) #10 Pmvk (MGP_CAROLIEiJ_G0025213) #11 Kcnn3 (MGP_CAROLIEiJ_G0025214) #12 Adar (MGP_CAROLIEiJ_G0025215) #13 MGP_CAROLIEiJ_G0025216 #14 Ube2q1 (MGP_CAROLIEiJ_G0025217) #15 She (MGP_CAROLIEiJ_G0025218) #16 Il6ra (MGP_CAROLIEiJ_G0025219) #17 Atp8b2 (MGP_CAROLIEiJ_G0025220) #18 Hax1 (MGP_CAROLIEiJ_G0025221) #20 Ubap2l (MGP_CAROLIEiJ_G0025222) #21 MGP_CAROLIEiJ_G0025223 #22 Tpm3-rs7 (MGP_CAROLIEiJ_G0025224) ##24 Nup210l (MGP_CAROLIEiJ_G0025225) #25 MGP_CAROLIEiJ_G0025226 #29 Rab13 (MGP_CAROLIEiJ_G0025227) #32 Jtb (MGP_CAROLIEiJ_G0025228) Creb3l4 (MGP_CAROLIEiJ_G0025229) #34 Slc39a1 (MGP_CAROLIEiJ_G0025230) #35 Crtc2 (MGP_CAROLIEiJ_G0025231) #36 Dennd4b (MGP_CAROLIEiJ_G0025232) #37 Gatad2b (MGP_CAROLIEiJ_G0025233) Slc27a3 (MGP_CAROLIEiJ_G0025234) Ints3 (MGP_CAROLIEiJ_G0025235) Npr1 (MGP_CAROLIEiJ_G0025236) Ilf2 (MGP_CAROLIEiJ_G0025237) Snapin (MGP_CAROLIEiJ_G0025238) Cricetidae ANCESTRAL SPECIES 6 ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a.y #29 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00390000007266 ENSGT00950000182971.B.b.c.a.b #7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a.y #29 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 Prairie vole MODERN SPECIES 99 Flad1 (ENSMOCG00000021020) Cks1b (ENSMOCG00000018757) #7 ENSMOCG00000021109 #8 ENSMOCG00000013620 #9 Pbxip1 (ENSMOCG00000014289) #10 Pmvk (ENSMOCG00000019772) #11 Kcnn3 (ENSMOCG00000000459) #12 Adar (ENSMOCG00000018547) #13 Chrnb2 (ENSMOCG00000020688) #14 Ube2q1 (ENSMOCG00000007891) #15 She (ENSMOCG00000000437) #16 Il6ra (ENSMOCG00000000552) #17 Atp8b2 (ENSMOCG00000000840) #18 Hax1 (ENSMOCG00000003057) #20 Ubap2l (ENSMOCG00000015398) #21 4933434E20Rik (ENSMOCG00000016695) #22 Cfap141 (ENSMOCG00000002986) #23 Tpm3 (ENSMOCG00000017543) #24 Nup210l (ENSMOCG00000005456) #25 ENSMOCG00000002329 #31 Rab13 (ENSMOCG00000021448) #32 Jtb (ENSMOCG00000009598) Creb3l4 (ENSMOCG00000016484) #34 ENSMOCG00000014154 #35 Crtc2 (ENSMOCG00000012139) #36 Dennd4b (ENSMOCG00000016756) #37 Gatad2b (ENSMOCG00000014982) Slc27a3 (ENSMOCG00000018654) Ints3 (ENSMOCG00000013737) Npr1 (ENSMOCG00000003109) Ilf2 (ENSMOCG00000016112) Northern American deer mouse MODERN SPECIES 19 Shc1 (ENSPEMG00000011338) #8 Pygo2 (ENSPEMG00000031296) #9 Pbxip1 (ENSPEMG00000008556) #10 Pmvk (ENSPEMG00000011929) #11 Kcnn3 (ENSPEMG00000019108) #12 ENSPEMG00000017450 Adar (ENSPEMG00000000814) #13 Chrnb2 (ENSPEMG00000015010) #14 ENSPEMG00000016011 #15 She (ENSPEMG00000026511) #16 Il6ra (ENSPEMG00000012201) #17 Atp8b2 (ENSPEMG00000017200) #18 ENSPEMG00000016049 Hax1 (ENSPEMG00000017453) #20 Ubap2l (ENSPEMG00000007855) #21 4933434E20Rik (ENSPEMG00000000559) #22 Cfap141 (ENSPEMG00000029478) #23 Tpm3 (ENSPEMG00000015470) #24 Nup210l (ENSPEMG00000012090) #25 ENSPEMG00000017728 #29 Rab13 (ENSPEMG00000017353) #32 Jtb (ENSPEMG00000025697) Creb3l4 (ENSPEMG00000016681) #34 Slc39a1 (ENSPEMG00000027157) #35 Crtc2 (ENSPEMG00000017679) #36 Dennd4b (ENSPEMG00000008335) #37 Gatad2b (ENSPEMG00000013374) ENSPEMG00000003903 Slc27a3 (ENSPEMG00000010037) Ints3 (ENSPEMG00000009736) Npr1 (ENSPEMG00000018127) Cricetinae ANCESTRAL SPECIES 13 ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT01030000234542.b.a.a.b.a.b.l #24 ENSGT00390000009491.c #25 ENSGT00950000182891.a.a.b.a.b.a.y #29 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 Golden Hamster MODERN SPECIES 714 ENSMAUG00000011157 ##7 Shc1 (ENSMAUG00000019925) #8 Pygo2 (ENSMAUG00000008090) #9 Pbxip1 (ENSMAUG00000008503) #10 Pmvk (ENSMAUG00000008973) #11 Kcnn3 (ENSMAUG00000000673) #12 Adar (ENSMAUG00000015796) #13 Chrnb2 (ENSMAUG00000021538) #14 Ube2q1 (ENSMAUG00000009758) #15 She (ENSMAUG00000009880) #16 Il6ra (ENSMAUG00000011038) #17 Atp8b2 (ENSMAUG00000001174) #18 Hax1 (ENSMAUG00000009013) #20 ENSMAUG00000022268 #21 ENSMAUG00000003991 #21 4933434E20Rik (ENSMAUG00000001710) #22 Cfap141 (ENSMAUG00000002399) #23 Tpm3 (ENSMAUG00000015501) #24 Nup210l (ENSMAUG00000020701) #25 ENSMAUG00000017944 #29 Rab13 (ENSMAUG00000015713) #32 Jtb (ENSMAUG00000006012) Slc39a1 (ENSMAUG00000018122) #35 Dennd4b (ENSMAUG00000020876) #37 Gatad2b (ENSMAUG00000021214) Slc27a3 (ENSMAUG00000009254) Ints3 (ENSMAUG00000003190) Npr1 (ENSMAUG00000011600) Ilf2 (ENSMAUG00000013875) Snapin (ENSMAUG00000008480) Chtop (ENSMAUG00000018496) Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 352 Cks1b (ENSCGRG00001007482) ##7 Shc1 (ENSCGRG00001020387) #8 Pygo2 (ENSCGRG00001001671) #9 Pbxip1 (ENSCGRG00001021803) #10 Pmvk (ENSCGRG00001011237) #11 Kcnn3 (ENSCGRG00001007060) #12 Adar (ENSCGRG00001013419) #13 Chrnb2 (ENSCGRG00001000525) #14 Ube2q1 (ENSCGRG00001022706) #15 She (ENSCGRG00001017032) #16 Il6ra (ENSCGRG00001022987) #17 Atp8b2 (ENSCGRG00001011569) #18 ENSCGRG00001005547 #19 ENSCGRG00001023646 #20 ENSCGRG00001012946 #21 4933434E20Rik (ENSCGRG00001018378) #22 Cfap141 (ENSCGRG00001014550) #23 Tpm3 (ENSCGRG00001019752) #24 Nup210l (ENSCGRG00001002603) #25 ENSCGRG00001000391 #29 Rab13 (ENSCGRG00001021505) #32 Jtb (ENSCGRG00001016269) Creb3l4 (ENSCGRG00001008711) #34 Slc39a1 (ENSCGRG00001011734) #35 Crtc2 (ENSCGRG00001011316) #36 Dennd4b (ENSCGRG00001001735) #37 Gatad2b (ENSCGRG00001023947) Slc27a3 (ENSCGRG00001015294) Ints3 (ENSCGRG00001024236) Npr1 (ENSCGRG00001000326) ENSCGRG00001009622 Chinese hamster chok1gshd MODERN SPECIES 1 Col6a3 (ENSCGRG00001024539) ENSCGRG00001024654 Rbm44 (ENSCGRG00001001293) Ramp1 (ENSCGRG00001024580) ENSCGRG00001010672 Scly (ENSCGRG00001024710) Espnl (ENSCGRG00001024719) Klhl30 (ENSCGRG00001024698) Erfe (ENSCGRG00001003481) Ilkap (ENSCGRG00001007174) Hes6 (ENSCGRG00001024376) Per2 (ENSCGRG00001006630) ENSCGRG00001000697 Traf3ip1 (ENSCGRG00001006330) Asb1 (ENSCGRG00001024723) ENSCGRG00001024677 #22 Twist2 (ENSCGRG00001010705) Hdac4 (ENSCGRG00001003116) Ndufa10 (ENSCGRG00001000771) Or6b2 (ENSCGRG00001010619) Or6b2b (ENSCGRG00001010498) Or6b3 (ENSCGRG00001009820) Or9s23 (ENSCGRG00001010591) ENSCGRG00001024695 Or9s27 (ENSCGRG00001010630) ENSCGRG00001009865 Or9s14 (ENSCGRG00001024692) ENSCGRG00001010578 ENSCGRG00001004954 Otos (ENSCGRG00001024726) Gpc1 (ENSCGRG00001010716) Lagomorpha ANCESTRAL SPECIES 1 ENSGT00950000182971.B.b.d ##7 ENSGT00950000182870.a.a.b #8 ENSGT00530000063948.a #9 ENSGT00940000162147 #10 ENSGT00390000014801 #11 ENSGT00950000182904.a.a.a #12 ENSGT00940000157243 #13 ENSGT00940000158417.b #14 ENSGT00940000160166 #15 ENSGT00940000159107 #16 ENSGT00940000161919 #17 ENSGT00940000160804 #18 ENSGT00940000162648 #19 ENSGT00390000018324 #20 ENSGT00390000003453.b.b #21 ENSGT00510000047366 #22 ENSGT00510000048901 #23 ENSGT00950000182891.a.a.b.a.b.b.b #31 ENSGT00940000159989 #32 ENSGT00390000016136 ENSGT00940000160806 #34 ENSGT00940000157062 #35 ENSGT00390000010652.B #36 ENSGT00940000160472 #37 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 ENSGT00390000008274 ENSGT00390000002869 Pika MODERN SPECIES 2747 C1orf43 (ENSOPRG00000007244) #22 CFAP141 (ENSOPRG00000007238) #23 Rabbit MODERN SPECIES 4 CKS1B (ENSOCUG00000016204) ##7 SHC1 (ENSOCUG00000016188) #8 PYGO2 (ENSOCUG00000016170) #9 ENSOCUG00000033095 PMVK (ENSOCUG00000016158) #11 KCNN3 (ENSOCUG00000013552) #12 ADAR (ENSOCUG00000008544) #13 UBE2Q1 (ENSOCUG00000003709) #15 SHE (ENSOCUG00000016365) #16 IL6R (ENSOCUG00000016354) #17 ENSOCUG00000016320 #18 ENSOCUG00000032271 #18 AQP10 (ENSOCUG00000029059) #19 ENSOCUG00000032263 #20 UBAP2L (ENSOCUG00000023943) #21 C1orf43 (ENSOCUG00000011821) #22 NUP210L (ENSOCUG00000011794) #25 ENSOCUG00000022459 ENSOCUG00000005113 ENSOCUG00000030717 ENSOCUG00000011792 #31 RAB13 (ENSOCUG00000006286) #32 ENSOCUG00000011788 CREB3L4 (ENSOCUG00000011784) #34 SLC39A1 (ENSOCUG00000003045) #35 CRTC2 (ENSOCUG00000015733) #36 ENSOCUG00000033615 #36 DENND4B (ENSOCUG00000011771) #37 GATAD2B (ENSOCUG00000008135) SLC27A3 (ENSOCUG00000005457) INTS3 (ENSOCUG00000005436)