Gnathostomata	ANCESTRAL SPECIES	425										ENSGT00550000074981	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00390000011821 #33	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24
Euteleostomi	ANCESTRAL SPECIES	219													ENSGT00390000011821 #33	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Sarcopterygii	ANCESTRAL SPECIES	232													ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00940000175678	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a	ENSGT00940000161590
Tetrapoda	ANCESTRAL SPECIES	144													ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00940000175678	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Amniota	ANCESTRAL SPECIES		ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT01070000254012	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a	ENSGT00940000161590
Mammalia	ANCESTRAL SPECIES		ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT01070000254012	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Theria	ANCESTRAL SPECIES	1	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Eutheria	ANCESTRAL SPECIES	5	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Glires	ANCESTRAL SPECIES	2	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Eurasian red squirrel	MODERN SPECIES	1	TMPRSS2 (ENSSVLG00005015845) #7	RIPK4 (ENSSVLG00005015741) #8	PRDM15 (ENSSVLG00005015213) #9	C2CD2 (ENSSVLG00005015130) #10	ZBTB21 (ENSSVLG00005015081) #11	UMODL1 (ENSSVLG00005014644) #12	ABCG1 (ENSSVLG00005014331) #13	ENSSVLG00005014286 #14	ENSSVLG00005014242 #15	TFF2 (ENSSVLG00005014174) #16	ENSSVLG00005014123 #17	TMPRSS3 (ENSSVLG00005013778) #18	UBASH3A (ENSSVLG00005013444) #19	RSPH1 (ENSSVLG00005013160) #20	SLC37A1 (ENSSVLG00005012892) #21	PDE9A (ENSSVLG00005011481) #22	ENSSVLG00005011248 #23	WDR4 (ENSSVLG00005025158) #24	ENSSVLG00005025141 #25	PKNOX1 (ENSSVLG00005025120) #26	CBS (ENSSVLG00005025055) #27	U2AF1 (ENSSVLG00005024981) #28	CRYAA (ENSSVLG00005024913) #29	ENSSVLG00005024890 #30	ENSSVLG00005024861 #31	HSF2BP (ENSSVLG00005024842) #32	ENSSVLG00005024819 #33	PDXK (ENSSVLG00005024785) #34	CSTB (ENSSVLG00005024758) #35	RRP1 (ENSSVLG00005024724) #36	AGPAT3 (ENSSVLG00005024678) #37
Marmotini	ANCESTRAL SPECIES	13	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00960000188749	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.lb #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Marmotini_b	ANCESTRAL SPECIES	30	ENSGT00940000155686	ENSGT00950000183004.a.b.a.b	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00960000188749	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.lb #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Squirrel	MODERN SPECIES	100	BACE2 (ENSSTOG00000011669)	MX1 (ENSSTOG00000012846)	FAM3B (ENSSTOG00000006382)	TMPRSS2 (ENSSTOG00000012868) #7	RIPK4 (ENSSTOG00000020499) #8	PRDM15 (ENSSTOG00000000262) #9	C2CD2 (ENSSTOG00000015690) #10	ZBTB21 (ENSSTOG00000010003) #11	UMODL1 (ENSSTOG00000027158) #12	ABCG1 (ENSSTOG00000027580) #13	TFF3 (ENSSTOG00000000593) #14	TMPRSS3 (ENSSTOG00000024702) #18	ENSSTOG00000000600 #19	RSPH1 (ENSSTOG00000002331) #20	SLC37A1 (ENSSTOG00000025445) #21	PDE9A (ENSSTOG00000001452) #22	WDR4 (ENSSTOG00000000442) #24	NDUFV3 (ENSSTOG00000000445) #25	PKNOX1 (ENSSTOG00000000447) #26	CBS (ENSSTOG00000024905) #27	U2AF1 (ENSSTOG00000012766) #28	CRYAA (ENSSTOG00000019571) #29	SIK1 (ENSSTOG00000003810) #30	HSF2BP (ENSSTOG00000011783) #32	RRP1B (ENSSTOG00000011790) #33	PDXK (ENSSTOG00000007194) #34	CSTB (ENSSTOG00000025748) #35	RRP1 (ENSSTOG00000011116) #36	AGPAT3 (ENSSTOG00000010466) #37	TRAPPC10 (ENSSTOG00000029008)	PWP2 (ENSSTOG00000014194)
Arctic ground squirrel	MODERN SPECIES	443											ENSUPAG00010003554	TMPRSS3 (ENSUPAG00010003524) #18	UBASH3A (ENSUPAG00010003505) #19	RSPH1 (ENSUPAG00010003495) #20	SLC37A1 (ENSUPAG00010003472) #21	PDE9A (ENSUPAG00010003388) #22	WDR4 (ENSUPAG00010003363) #24	ENSUPAG00010003358 #25	PKNOX1 (ENSUPAG00010003344) #26	CBS (ENSUPAG00010003327) #27	U2AF1 (ENSUPAG00010003308) #28	CRYAA (ENSUPAG00010003295) #29	SIK1 (ENSUPAG00010003268) #30	HSF2BP (ENSUPAG00010003260) #32	RRP1B (ENSUPAG00010003249) #33	PDXK (ENSUPAG00010003236) #34	ENSUPAG00010003225 #35	RRP1 (ENSUPAG00010003195) #36	AGPAT3 (ENSUPAG00010003091) #37	TRAPPC10 (ENSUPAG00010003060)	PWP2 (ENSUPAG00010003026)
Alpin marmot	MODERN SPECIES	4	MX1 (ENSMMMG00000004765)	TMPRSS2 (ENSMMMG00000010132) #7	RIPK4 (ENSMMMG00000010156) #8	PRDM15 (ENSMMMG00000010191) #9	C2CD2 (ENSMMMG00000010233) #10	ENSMMMG00000010266 #11	UMODL1 (ENSMMMG00000010282) #12	ABCG1 (ENSMMMG00000010456) #13	TFF3 (ENSMMMG00000010483) #14	ENSMMMG00000010491	ENSMMMG00000010506	TMPRSS3 (ENSMMMG00000010515) #18	UBASH3A (ENSMMMG00000010550) #19	RSPH1 (ENSMMMG00000010607) #20	SLC37A1 (ENSMMMG00000010809) #21	PDE9A (ENSMMMG00000010894) #22	WDR4 (ENSMMMG00000011036) #24	ENSMMMG00000011055 #25	PKNOX1 (ENSMMMG00000011067) #26	CBS (ENSMMMG00000011087) #27	U2AF1 (ENSMMMG00000011117) #28	CRYAA (ENSMMMG00000011152) #29	SIK1 (ENSMMMG00000011169) #30	HSF2BP (ENSMMMG00000011193) #32	RRP1B (ENSMMMG00000011209) #33	PDXK (ENSMMMG00000011250) #34	ENSMMMG00000011256 #35	RRP1 (ENSMMMG00000011263) #36	ENSMMMG00000011344	AGPAT3 (ENSMMMG00000011363) #37	TRAPPC10 (ENSMMMG00000011441)
Hystricomorpha	ANCESTRAL SPECIES	60	ENSGT00940000155686.n.b	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33
Hystricomorpha_a	ANCESTRAL SPECIES	37	ENSGT00940000155686.n.b	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b.m	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A
Guinea pig	MODERN SPECIES	90	ENSCPOG00000013108	ENSCPOG00000021489 #7	ENSCPOG00000007052 #7	RIPK4 (ENSCPOG00000022900) #8	PRDM15 (ENSCPOG00000023446) #9	C2CD2 (ENSCPOG00000002808) #10	ZBTB21 (ENSCPOG00000019792) #11	UMODL1 (ENSCPOG00000023566) #12	ABCG1 (ENSCPOG00000015194) #13	ENSCPOG00000006226 #14	TFF2 (ENSCPOG00000012065) #16	TMPRSS3 (ENSCPOG00000012057) #18	UBASH3A (ENSCPOG00000013429) #19	RSPH1 (ENSCPOG00000002266) #20	SLC37A1 (ENSCPOG00000011616) #21	PDE9A (ENSCPOG00000014197) #22	WDR4 (ENSCPOG00000037037) #24	ENSCPOG00000035722 #25	PKNOX1 (ENSCPOG00000039252) #26	CBS (ENSCPOG00000007817) #27	U2AF1 (ENSCPOG00000004893) #28	Cryaa (ENSCPOG00000004350) #29	SIK1 (ENSCPOG00000026214) #30	HSF2BP (ENSCPOG00000002394) #32	RRP1B (ENSCPOG00000002396) #33	ENSCPOG00000004718	B3GALT5 (ENSCPOG00000035318)	SH3BGR (ENSCPOG00000003488)	LCA5L (ENSCPOG00000021836)	GET1 (ENSCPOG00000040238)	HMGN1 (ENSCPOG00000033135)
Hystricomorpha_b	ANCESTRAL SPECIES	34	ENSGT00940000155686.n.b	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b.m	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A
Long-tailed chinchilla	MODERN SPECIES	114	BACE2 (ENSCLAG00000006208)	DSCAM (ENSCLAG00000016317)	PCP4 (ENSCLAG00000012532)	RIPK4 (ENSCLAG00000007447) #8	PRDM15 (ENSCLAG00000005430) #9	C2CD2 (ENSCLAG00000007896) #10	ZBTB21 (ENSCLAG00000006530) #11	UMODL1 (ENSCLAG00000009892) #12	ABCG1 (ENSCLAG00000013116) #13	TFF3 (ENSCLAG00000013670) #14	TFF2 (ENSCLAG00000014359) #16	TMPRSS3 (ENSCLAG00000006858) #18	UBASH3A (ENSCLAG00000005633) #19	RSPH1 (ENSCLAG00000005001) #20	SLC37A1 (ENSCLAG00000006046) #21	PDE9A (ENSCLAG00000005531) #22	WDR4 (ENSCLAG00000004584) #24	NDUFV3 (ENSCLAG00000010460) #25	PKNOX1 (ENSCLAG00000009292) #26	CBS (ENSCLAG00000012158) #27	U2AF1 (ENSCLAG00000009589) #28	CRYAA (ENSCLAG00000008715) #29	SIK1 (ENSCLAG00000004717) #30	HSF2BP (ENSCLAG00000006525) #32	RRP1B (ENSCLAG00000005622) #33	ENSCLAG00000008829	ENSCLAG00000006218	B3GALT5 (ENSCLAG00000009203)	ENSCLAG00000008933	SH3BGR (ENSCLAG00000008599)	GET1 (ENSCLAG00000005886)
Degu	MODERN SPECIES	86	ENSODEG00000013917	TMPRSS2 (ENSODEG00000013358) #7	RIPK4 (ENSODEG00000013779) #8	PRDM15 (ENSODEG00000013112) #9	C2CD2 (ENSODEG00000014616) #10	ZBTB21 (ENSODEG00000014325) #11	UMODL1 (ENSODEG00000012627) #12	ABCG1 (ENSODEG00000012323) #13	TFF3 (ENSODEG00000013636) #14	TFF2 (ENSODEG00000012650) #16	ENSODEG00000014901 #17	TMPRSS3 (ENSODEG00000013031) #18	UBASH3A (ENSODEG00000013424) #19	RSPH1 (ENSODEG00000012910) #20	SLC37A1 (ENSODEG00000013553) #21	PDE9A (ENSODEG00000013816) #22	WDR4 (ENSODEG00000012553) #24	ENSODEG00000012402	ENSODEG00000014099 #25	PKNOX1 (ENSODEG00000012122) #26	CBS (ENSODEG00000012996) #27	U2AF1 (ENSODEG00000014749) #28	CRYAA (ENSODEG00000014166) #29	SIK1 (ENSODEG00000012072) #30	HSF2BP (ENSODEG00000011763) #32	RRP1B (ENSODEG00000013177) #33	ENSODEG00000013785	ENSODEG00000012206	ENSODEG00000013679	SH3BGR (ENSODEG00000013522)	LCA5L (ENSODEG00000012419)
Naked mole-rat female	MODERN SPECIES	11	RIPK4 (ENSHGLG00000011078) #8	PRDM15 (ENSHGLG00000016972) #9	C2CD2 (ENSHGLG00000016958) #10	ZBTB21 (ENSHGLG00000017068) #11	ENSHGLG00000015409 #12	ENSHGLG00000009228	ENSHGLG00000035485 #13	ENSHGLG00000040957 #13	TFF3 (ENSHGLG00000007574) #14	TFF2 (ENSHGLG00000006500) #16	ENSHGLG00000050421	TMPRSS3 (ENSHGLG00000007911) #18	UBASH3A (ENSHGLG00000036614) #19	RSPH1 (ENSHGLG00000005500) #20	SLC37A1 (ENSHGLG00000008351) #21	PDE9A (ENSHGLG00000019554) #22	WDR4 (ENSHGLG00000017900) #24	ENSHGLG00000035018	NDUFV3 (ENSHGLG00000041826) #25	PKNOX1 (ENSHGLG00000040628) #26	CBS (ENSHGLG00000015848) #27	U2AF1 (ENSHGLG00000009841) #28	CRYAA (ENSHGLG00000009413) #29	SIK1 (ENSHGLG00000013670) #30	HSF2BP (ENSHGLG00000008796) #32	ENSHGLG00000042952	ENSHGLG00000004968 #33	ENSHGLG00000035096	ENSHGLG00000036095	ENSHGLG00000015583	MORC3 (ENSHGLG00000018450)
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Kangaroo rat	MODERN SPECIES	422	Tmprss2 (ENSDORG00000003340) #7	Ripk4 (ENSDORG00000008414) #8	Prdm15 (ENSDORG00000009748) #9	C2cd2 (ENSDORG00000000978) #10	ENSDORG00000028102	Zbtb21 (ENSDORG00000000981) #11	Umodl1 (ENSDORG00000001772) #12	Abcg1 (ENSDORG00000025745) #13	Tff3 (ENSDORG00000029966) #14	Tff2 (ENSDORG00000003845) #16	Tff1 (ENSDORG00000009227) #17	Tmprss3 (ENSDORG00000009229) #18	ENSDORG00000024014 #19	Rsph1 (ENSDORG00000005155) #20	Slc37a1 (ENSDORG00000010442) #21	Pde9a (ENSDORG00000002149) #22	Wdr4 (ENSDORG00000002150) #24	Pknox1 (ENSDORG00000000207) #26	Cbs (ENSDORG00000000208) #27	U2af1 (ENSDORG00000000211) #28	Cryaa (ENSDORG00000008969) #29	Hsf2bp (ENSDORG00000005493) #32	Rrp1b (ENSDORG00000005496) #33	Pdxk (ENSDORG00000006607) #34	Cstb (ENSDORG00000028860) #35	Rrp1 (ENSDORG00000002104) #36	ENSDORG00000015851	Trappc10 (ENSDORG00000011540)	Pwp2 (ENSDORG00000003015)	Gatd3a (ENSDORG00000003016)	Dnmt3l (ENSDORG00000027856)
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Muroidea	ANCESTRAL SPECIES	11	ENSGT00950000183004.a.b.a.b	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000159201	ENSGT00390000014679	ENSGT00940000158298	ENSGT00390000009312	ENSGT00940000158992	ENSGT00940000161009	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989.t #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Murinae	ANCESTRAL SPECIES	18	ENSGT00940000159201	ENSGT00390000014679	ENSGT00940000158298	ENSGT00390000009312	ENSGT00940000158992	ENSGT00940000161009	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989.t #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01050000248522	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873
Mus	ANCESTRAL SPECIES	21	ENSGT00940000159201	ENSGT00390000014679	ENSGT00940000158298	ENSGT00390000009312	ENSGT00940000158992	ENSGT00940000161009	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989.t #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000159201	ENSGT00390000014679	ENSGT00940000158298	ENSGT00390000009312	ENSGT00940000158992	ENSGT00940000161009	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989.t #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00800000125293	ENSGT00940000160234	ENSGT00940000162086	ENSGT00940000154549.b	ENSGT00530000063777.a.a.b	ENSGT00530000063777.a.a.a
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000159201	ENSGT00390000014679	ENSGT00940000158298	ENSGT00390000009312	ENSGT00940000158992	ENSGT00940000161009	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989.t #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00800000125293	ENSGT00940000160234	ENSGT00940000162086	ENSGT00940000154549.b	ENSGT00530000063777.a.a.b	ENSGT00530000063777.a.a.a
Mouse	MODERN SPECIES	8	Mdga1 (ENSMUSG00000043557)	Zfand3 (ENSMUSG00000044477)	Btbd9 (ENSMUSG00000062202)	Glo1 (ENSMUSG00000024026)	Dnah8 (ENSMUSG00000033826)	Glp1r (ENSMUSG00000024027)	Umodl1 (ENSMUSG00000054134) #12	Abcg1 (ENSMUSG00000024030) #13	Tff3 (ENSMUSG00000024029) #14	Tff2 (ENSMUSG00000024028) #16	Tff1 (ENSMUSG00000024032) #17	Tmprss3 (ENSMUSG00000024034) #18	Ubash3a (ENSMUSG00000042345) #19	Rsph1 (ENSMUSG00000024033) #20	Slc37a1 (ENSMUSG00000024036) #21	Pde9a (ENSMUSG00000041119) #22	Wdr4 (ENSMUSG00000024037) #24	Ndufv3 (ENSMUSG00000024038) #25	Pknox1 (ENSMUSG00000006705) #26	Cbs (ENSMUSG00000024039) #27	U2af1 (ENSMUSG00000061613) #28	Cryaa (ENSMUSG00000024041) #29	Sik1 (ENSMUSG00000024042) #30	Hsf2bp (ENSMUSG00000002076) #32	Rrp1b (ENSMUSG00000058392) #33	Notch3 (ENSMUSG00000038146)	Ephx3 (ENSMUSG00000037577)	Brd4 (ENSMUSG00000024002)	Akap8 (ENSMUSG00000024045)	Akap8l (ENSMUSG00000002625)	Wiz (ENSMUSG00000024050)
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000159201	ENSGT00390000014679	ENSGT00940000158298	ENSGT00390000009312	ENSGT00940000158992	ENSGT00940000161009	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989.t #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00800000125293	ENSGT00940000160234	ENSGT00940000162086	ENSGT00940000154549.b	ENSGT00530000063777.a.a.b	ENSGT00530000063777.a.a.a
spretus	MODERN SPECIES	8	Mdga1 (MGP_SPRETEiJ_G0022266)	Zfand3 (MGP_SPRETEiJ_G0022267)	Btbd9 (MGP_SPRETEiJ_G0022268)	Glo1 (MGP_SPRETEiJ_G0022269)	Dnah8 (MGP_SPRETEiJ_G0022270)	Glp1r (MGP_SPRETEiJ_G0022271)	Umodl1 (MGP_SPRETEiJ_G0022272) #12	Abcg1 (MGP_SPRETEiJ_G0022273) #13	Tff3 (MGP_SPRETEiJ_G0022274) #14	Tff2 (MGP_SPRETEiJ_G0022275) #16	Tff1 (MGP_SPRETEiJ_G0022276) #17	Tmprss3 (MGP_SPRETEiJ_G0022277) #18	Ubash3a (MGP_SPRETEiJ_G0022278) #19	Rsph1 (MGP_SPRETEiJ_G0022279) #20	Slc37a1 (MGP_SPRETEiJ_G0022280) #21	Pde9a (MGP_SPRETEiJ_G0022281) #22	Wdr4 (MGP_SPRETEiJ_G0022282) #24	Ndufv3 (MGP_SPRETEiJ_G0022283) #25	Pknox1 (MGP_SPRETEiJ_G0022284) #26	Cbs (MGP_SPRETEiJ_G0022285) #27	MGP_SPRETEiJ_G0022286 #28	Cryaa (MGP_SPRETEiJ_G0022287) #29	Sik1 (MGP_SPRETEiJ_G0022288) #30	Hsf2bp (MGP_SPRETEiJ_G0022289) #32	Rrp1b (MGP_SPRETEiJ_G0022290) #33	Notch3 (MGP_SPRETEiJ_G0022291)	Ephx3 (MGP_SPRETEiJ_G0022292)	Brd4 (MGP_SPRETEiJ_G0022293)	Akap8 (MGP_SPRETEiJ_G0022294)	Akap8l (MGP_SPRETEiJ_G0022295)	MGP_SPRETEiJ_G0022296
Steppe mouse	MODERN SPECIES	3360	ENSMSIG00000011093	ENSMSIG00000011104	ENSMSIG00000011157	Dnah8 (ENSMSIG00000011171)	Glp1r (ENSMSIG00000011363)	Umodl1 (ENSMSIG00000011380) #12	Abcg1 (ENSMSIG00000011546) #13	Tff3 (ENSMSIG00000011620) #14	Tff2 (ENSMSIG00000011628) #16	Tff1 (ENSMSIG00000011643) #17	Tmprss3 (ENSMSIG00000011659) #18	Ubash3a (ENSMSIG00000011709) #19	ENSMSIG00000011724	Rsph1 (ENSMSIG00000011731) #20	Slc37a1 (ENSMSIG00000011757) #21	Pde9a (ENSMSIG00000011826) #22	Wdr4 (ENSMSIG00000011888) #24	Ndufv3 (ENSMSIG00000011906) #25	Pknox1 (ENSMSIG00000011918) #26	Cbs (ENSMSIG00000011935) #27	U2af1 (ENSMSIG00000011991) #28	Cryaa (ENSMSIG00000012047) #29	ENSMSIG00000012078	Sik1 (ENSMSIG00000012092) #30	Hsf2bp (ENSMSIG00000012149) #32	Rrp1b (ENSMSIG00000012198) #33
Ryukyu mouse	MODERN SPECIES	8	Mdga1 (MGP_CAROLIEiJ_G0021352)	Zfand3 (MGP_CAROLIEiJ_G0021353)	Btbd9 (MGP_CAROLIEiJ_G0021354)	Glo1 (MGP_CAROLIEiJ_G0021355)	Dnah8 (MGP_CAROLIEiJ_G0021356)	Glp1r (MGP_CAROLIEiJ_G0021357)	Umodl1 (MGP_CAROLIEiJ_G0021358) #12	Abcg1 (MGP_CAROLIEiJ_G0021359) #13	Tff3 (MGP_CAROLIEiJ_G0021360) #14	Tff2 (MGP_CAROLIEiJ_G0021361) #16	Tff1 (MGP_CAROLIEiJ_G0021362) #17	Tmprss3 (MGP_CAROLIEiJ_G0021363) #18	Ubash3a (MGP_CAROLIEiJ_G0021364) #19	Rsph1 (MGP_CAROLIEiJ_G0021365) #20	Slc37a1 (MGP_CAROLIEiJ_G0021366) #21	Pde9a (MGP_CAROLIEiJ_G0021367) #22	Wdr4 (MGP_CAROLIEiJ_G0021368) #24	Ndufv3 (MGP_CAROLIEiJ_G0021369) #25	Pknox1 (MGP_CAROLIEiJ_G0021370) #26	Cbs (MGP_CAROLIEiJ_G0021371) #27	U2af1 (MGP_CAROLIEiJ_G0021372) #28	Cryaa (MGP_CAROLIEiJ_G0021373) #29	Sik1 (MGP_CAROLIEiJ_G0021374) #30	MGP_CAROLIEiJ_G0021375 #32	Rrp1b (MGP_CAROLIEiJ_G0021376) #33	Notch3 (MGP_CAROLIEiJ_G0021377)	Ephx3 (MGP_CAROLIEiJ_G0021378)	Brd4 (MGP_CAROLIEiJ_G0021379)	Akap8 (MGP_CAROLIEiJ_G0021380)	Akap8l (MGP_CAROLIEiJ_G0021381)	MGP_CAROLIEiJ_G0021382
Shrew mouse	MODERN SPECIES	13	Mdga1 (MGP_PahariEiJ_G0023671)	Zfand3 (MGP_PahariEiJ_G0023672)	Btbd9 (MGP_PahariEiJ_G0023673)	Glo1 (MGP_PahariEiJ_G0023674)	Dnah8 (MGP_PahariEiJ_G0023675)	Glp1r (MGP_PahariEiJ_G0023676)	Umodl1 (MGP_PahariEiJ_G0023677) #12	Abcg1 (MGP_PahariEiJ_G0023678) #13	Tff3 (MGP_PahariEiJ_G0023679) #14	Tff2 (MGP_PahariEiJ_G0023680) #16	Tff1 (MGP_PahariEiJ_G0023681) #17	Tmprss3 (MGP_PahariEiJ_G0023682) #18	Ubash3a (MGP_PahariEiJ_G0023683) #19	Rsph1 (MGP_PahariEiJ_G0023684) #20	Slc37a1 (MGP_PahariEiJ_G0023685) #21	Pde9a (MGP_PahariEiJ_G0023686) #22	MGP_PahariEiJ_G0023687	Ndufv3 (MGP_PahariEiJ_G0023688) #25	Pknox1 (MGP_PahariEiJ_G0023689) #26	Cbs (MGP_PahariEiJ_G0023690) #27	U2af1 (MGP_PahariEiJ_G0023691) #28	Cryaa (MGP_PahariEiJ_G0023692) #29	Sik1 (MGP_PahariEiJ_G0023693) #30	MGP_PahariEiJ_G0023694 #32	Rrp1b (MGP_PahariEiJ_G0023695) #33	Ppp1r14c (MGP_PahariEiJ_G0023696)	Iyd (MGP_PahariEiJ_G0023697)	Plekhg1 (MGP_PahariEiJ_G0023698)	Mthfd1l (MGP_PahariEiJ_G0023699)	Akap12 (MGP_PahariEiJ_G0023700)	Zbtb2 (MGP_PahariEiJ_G0023701)
Rat	MODERN SPECIES	12	Mdga1 (ENSRNOG00000000536)	Zfand3 (ENSRNOG00000059659)	Btbd9 (ENSRNOG00000000540)	Glo1 (ENSRNOG00000000541)	Dnah8 (ENSRNOG00000000542)	Glp1r (ENSRNOG00000001152)	Umodl1 (ENSRNOG00000001157) #12	Abcg1 (ENSRNOG00000001158) #13	Tff3 (ENSRNOG00000001159) #14	Tff2 (ENSRNOG00000001162) #16	Tff1 (ENSRNOG00000001164) #17	Tmprss3 (ENSRNOG00000001165) #18	Ubash3a (ENSRNOG00000001167) #19	Rsph1 (ENSRNOG00000057862) #20	Slc37a1 (ENSRNOG00000001169) #21	Pde9a (ENSRNOG00000001174) #22	Wdr4 (ENSRNOG00000001181) #24	Ndufv3 (ENSRNOG00000001182) #25	Pknox1 (ENSRNOG00000001184) #26	Cbs (ENSRNOG00000029528) #27	U2af1 (ENSRNOG00000045860) #28	Sik1 (ENSRNOG00000001189) #30	Hsf2bp (ENSRNOG00000001193) #32	Rrp1b (ENSRNOG00000001194) #33	RGD1566085 (ENSRNOG00000068407) #34	Pdxk (ENSRNOG00000049937) #34	Cstb (ENSRNOG00000001201) #35	Rrp1 (ENSRNOG00000001203) #36	Gm56820 (ENSRNOG00000062695)	Agpat3 (ENSRNOG00000001205) #37	Trappc10 (ENSRNOG00000023210)
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000159201	ENSGT00390000014679	ENSGT00940000158298	ENSGT00390000009312	ENSGT00940000158992	ENSGT00940000161009	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989.t #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00940000159201	ENSGT00390000014679	ENSGT00940000158298	ENSGT00390000009312	ENSGT00940000158992	ENSGT00940000161009	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989.t #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Chinese hamster chok1gshd	MODERN SPECIES	184	ENSCGRG00001004307	Zfand3 (ENSCGRG00001000713)	Btbd9 (ENSCGRG00001012984)	Glo1 (ENSCGRG00001013585)	Dnah8 (ENSCGRG00001021025)	Glp1r (ENSCGRG00001017257)	Umodl1 (ENSCGRG00001019253) #12	Abcg1 (ENSCGRG00001020031) #13	Tff3 (ENSCGRG00001022835) #14	Tff2 (ENSCGRG00001002931) #16	Tff1 (ENSCGRG00001003463) #17	Tmprss3 (ENSCGRG00001008239) #18	Ubash3a (ENSCGRG00001017509) #19	Rsph1 (ENSCGRG00001018109) #20	Slc37a1 (ENSCGRG00001019505) #21	Pde9a (ENSCGRG00001020664) #22	Wdr4 (ENSCGRG00001018232) #24	Ndufv3 (ENSCGRG00001019359) #25	Pknox1 (ENSCGRG00001020033) #26	Cbs (ENSCGRG00001021569) #27	ENSCGRG00001003060 #28	Cryaa (ENSCGRG00001013823) #29	Sik1 (ENSCGRG00001015496) #30
Golden Hamster	MODERN SPECIES	641			Btbd9 (ENSMAUG00000009607)	ENSMAUG00000019751	Dnah8 (ENSMAUG00000002892)	Glp1r (ENSMAUG00000014036)	Umodl1 (ENSMAUG00000011519) #12	Abcg1 (ENSMAUG00000010749) #13	Tff3 (ENSMAUG00000015898) #14	Tff2 (ENSMAUG00000013491) #16	Tff1 (ENSMAUG00000020003) #17	Tmprss3 (ENSMAUG00000020969) #18	Ubash3a (ENSMAUG00000019578) #19	Rsph1 (ENSMAUG00000014285) #20	Slc37a1 (ENSMAUG00000021076) #21	Pde9a (ENSMAUG00000001943) #22	Wdr4 (ENSMAUG00000020696) #24	Ndufv3 (ENSMAUG00000020188) #25	Pknox1 (ENSMAUG00000015669) #26	Cbs (ENSMAUG00000020960) #27	U2af1 (ENSMAUG00000020528) #28	Cryaa (ENSMAUG00000017095) #29	Sik1 (ENSMAUG00000018473) #30	Hsf2bp (ENSMAUG00000018607) #32	Rrp1b (ENSMAUG00000021508) #33	Rrp1 (ENSMAUG00000017653) #36	Agpat3 (ENSMAUG00000019017) #37	Trappc10 (ENSMAUG00000021971)	Pwp2 (ENSMAUG00000020265)	Icosl (ENSMAUG00000019140)	Dnmt3l (ENSMAUG00000019680)
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00940000159201	ENSGT00390000014679	ENSGT00940000158298	ENSGT00390000009312	ENSGT00940000158992	ENSGT00940000161009	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989.t #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Northern American deer mouse	MODERN SPECIES	13	Zfand3 (ENSPEMG00000016125)	Btbd9 (ENSPEMG00000016191)	Glo1 (ENSPEMG00000027991)	Dnah8 (ENSPEMG00000018970)	Glp1r (ENSPEMG00000014524)	Umodl1 (ENSPEMG00000012432) #12	Abcg1 (ENSPEMG00000017927) #13	Tff3 (ENSPEMG00000015455) #14	ENSPEMG00000030006 #16	ENSPEMG00000015232 #16	Tff1 (ENSPEMG00000010221) #17	Tmprss3 (ENSPEMG00000008185) #18	Ubash3a (ENSPEMG00000008263) #19	Rsph1 (ENSPEMG00000007960) #20	Slc37a1 (ENSPEMG00000012392) #21	Pde9a (ENSPEMG00000023664) #22	Wdr4 (ENSPEMG00000022550) #24	Ndufv3 (ENSPEMG00000022595) #25	Pknox1 (ENSPEMG00000021492) #26	Cbs (ENSPEMG00000021739) #27	U2af1 (ENSPEMG00000021041) #28	ENSPEMG00000027416	Cryaa (ENSPEMG00000021591) #29	Sik1 (ENSPEMG00000024129) #30	Hsf2bp (ENSPEMG00000021638) #32	Rrp1b (ENSPEMG00000022490) #33	ENSPEMG00000023225 #34	ENSPEMG00000030967 #34	Cstb (ENSPEMG00000025261) #35	Rrp1 (ENSPEMG00000018421) #36	Agpat3 (ENSPEMG00000016159) #37
Prairie vole	MODERN SPECIES	352	Zfand3 (ENSMOCG00000008194)	ENSMOCG00000000360	Btbd9 (ENSMOCG00000015866)	Glo1 (ENSMOCG00000013858)	Dnah8 (ENSMOCG00000019275)	Glp1r (ENSMOCG00000002444)	ENSMOCG00000000831 #12	Abcg1 (ENSMOCG00000001093) #13	Tff3 (ENSMOCG00000016667) #14	Tff2 (ENSMOCG00000015407) #16	Tff1 (ENSMOCG00000009311) #17	Tmprss3 (ENSMOCG00000022532) #18	Ubash3a (ENSMOCG00000005953) #19	Rsph1 (ENSMOCG00000003255) #20	Slc37a1 (ENSMOCG00000013618) #21	Pde9a (ENSMOCG00000012568) #22	Wdr4 (ENSMOCG00000022127) #24	ENSMOCG00000021683 #25	Pknox1 (ENSMOCG00000000944) #26	Cbs (ENSMOCG00000010781) #27	U2af1 (ENSMOCG00000003736) #28	Cryaa (ENSMOCG00000001790) #29	Sik1 (ENSMOCG00000000510) #30	Hsf2bp (ENSMOCG00000006152) #32	Rrp1b (ENSMOCG00000001117) #33	Pdxk (ENSMOCG00000006016) #34	Cstb (ENSMOCG00000022035) #35	Rrp1 (ENSMOCG00000015687) #36	ENSMOCG00000010991 #37	Trappc10 (ENSMOCG00000006082)	Pwp2 (ENSMOCG00000003844)
Upper Galilee mountains blind mole rat	MODERN SPECIES	557		Tmprss2 (ENSNGAG00000006186) #7	Ripk4 (ENSNGAG00000011212) #8	Prdm15 (ENSNGAG00000023708) #9	C2cd2 (ENSNGAG00000021112) #10	Zbtb21 (ENSNGAG00000022785) #11	Umodl1 (ENSNGAG00000014854) #12	Abcg1 (ENSNGAG00000023186) #13	Tff3 (ENSNGAG00000023456) #14	Tff2 (ENSNGAG00000018297) #16	Tff1 (ENSNGAG00000000843) #17	Tmprss3 (ENSNGAG00000002127) #18	Ubash3a (ENSNGAG00000019150) #19	Rsph1 (ENSNGAG00000005022) #20	Slc37a1 (ENSNGAG00000022440) #21	Pde9a (ENSNGAG00000014370) #22	Wdr4 (ENSNGAG00000017117) #24	Ndufv3 (ENSNGAG00000011220) #25	Pknox1 (ENSNGAG00000015912) #26	Cbs (ENSNGAG00000011354) #27	U2af1 (ENSNGAG00000021641) #28	Cryaa (ENSNGAG00000024156) #29	Sik1 (ENSNGAG00000015397) #30	Hsf2bp (ENSNGAG00000002647) #32	Rrp1b (ENSNGAG00000021073) #33	Pdxk (ENSNGAG00000011007) #34	Cstb (ENSNGAG00000001985) #35	ENSNGAG00000022344 #36	Agpat3 (ENSNGAG00000023781) #37	ENSNGAG00000020131	Pwp2 (ENSNGAG00000021106)
Lesser Egyptian jerboa	MODERN SPECIES	54	ENSJJAG00000023808	Tmprss2 (ENSJJAG00000021090) #7	Ripk4 (ENSJJAG00000023752) #8	Prdm15 (ENSJJAG00000016457) #9	C2cd2 (ENSJJAG00000016581) #10	Zbtb21 (ENSJJAG00000002063) #11	Umodl1 (ENSJJAG00000012073) #12	Abcg1 (ENSJJAG00000011288) #13	Tff3 (ENSJJAG00000014849) #14	Tff2 (ENSJJAG00000022987) #16	Tff1 (ENSJJAG00000020776) #17	Tmprss3 (ENSJJAG00000017683) #18	Ubash3a (ENSJJAG00000018947) #19	Rsph1 (ENSJJAG00000023687) #20	Slc37a1 (ENSJJAG00000009176) #21	Pde9a (ENSJJAG00000022814) #22	Wdr4 (ENSJJAG00000016232) #24	ENSJJAG00000012928 #25	ENSJJAG00000022210	Pknox1 (ENSJJAG00000003326) #26	Cbs (ENSJJAG00000019675) #27	U2af1 (ENSJJAG00000000485) #28	Cryaa (ENSJJAG00000008890) #29	Sik1 (ENSJJAG00000021978) #30	Hsf2bp (ENSJJAG00000011558) #32	Rrp1b (ENSJJAG00000021279) #33	Pdxk (ENSJJAG00000016609) #34	ENSJJAG00000019836 #35	Rrp1 (ENSJJAG00000018886) #36	Agpat3 (ENSJJAG00000019770) #37	Lbh (ENSJJAG00000023694)
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000155587.a.b #22
Pika	MODERN SPECIES	2584																ENSOPRG00000002691 #22
Rabbit	MODERN SPECIES	215																ENSOCUG00000004382 #22
Tree shrew	MODERN SPECIES	2906														RSPH1 (ENSTBEG00000009670) #20	SLC37A1 (ENSTBEG00000009995) #21	PDE9A (ENSTBEG00000010351) #22
Primates	ANCESTRAL SPECIES	1	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873
Haplorrhini	ANCESTRAL SPECIES	22	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00860000135708	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #37
Catarrhini	ANCESTRAL SPECIES	25	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT01000000215029	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00860000135708	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487
Hominoidea	ANCESTRAL SPECIES	26	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT01000000215029	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00860000135708	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487
Hominidae	ANCESTRAL SPECIES	25	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT01000000215029	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000167184	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	27	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT01000000215029	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000167184	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487
Homo/Pan group	ANCESTRAL SPECIES	26	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT01000000215029	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000167184	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487
Pan	ANCESTRAL SPECIES	27	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00860000136018	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT01000000215029	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000167184	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37
Bonobo	MODERN SPECIES	12	TMPRSS2 (ENSPPAG00000018889) #7	RIPK4 (ENSPPAG00000027031) #8	ENSPPAG00000030922 #9	C2CD2 (ENSPPAG00000004421) #10	ZBTB21 (ENSPPAG00000005987) #11	UMODL1 (ENSPPAG00000011906) #12	ENSPPAG00000027172 #13	ENSPPAG00000030016	TFF3 (ENSPPAG00000030214) #14	TFF2 (ENSPPAG00000030237) #16	TFF1 (ENSPPAG00000030343) #17	TMPRSS3 (ENSPPAG00000030425) #18	UBASH3A (ENSPPAG00000031719) #19	RSPH1 (ENSPPAG00000032996) #20	SLC37A1 (ENSPPAG00000034205) #21	PDE9A (ENSPPAG00000027576) #22	WDR4 (ENSPPAG00000038150) #24	NDUFV3 (ENSPPAG00000016184) #25	ERVH48-1 (ENSPPAG00000006329)	PKNOX1 (ENSPPAG00000027586) #26	CBS (ENSPPAG00000042865) #27	U2AF1 (ENSPPAG00000000845) #28	ENSPPAG00000026875	CRYAA (ENSPPAG00000034607) #29	SIK1 (ENSPPAG00000034814) #30	HSF2BP (ENSPPAG00000034999) #32	RRP1B (ENSPPAG00000035319) #33	PDXK (ENSPPAG00000020347) #34	ENSPPAG00000028631 #35	RRP1 (ENSPPAG00000029050) #36	AGPAT3 (ENSPPAG00000029344) #37
Chimpanzee	MODERN SPECIES	12	TMPRSS2 (ENSPTRG00000013928) #7	RIPK4 (ENSPTRG00000013929) #8	PRDM15 (ENSPTRG00000013930) #9	C2CD2 (ENSPTRG00000013932) #10	ZBTB21 (ENSPTRG00000050158) #11	UMODL1 (ENSPTRG00000013936) #12	ABCG1 (ENSPTRG00000013937) #13	ENSPTRG00000046019	TFF3 (ENSPTRG00000013939) #14	TFF2 (ENSPTRG00000013940) #16	TFF1 (ENSPTRG00000013941) #17	TMPRSS3 (ENSPTRG00000013942) #18	UBASH3A (ENSPTRG00000013943) #19	RSPH1 (ENSPTRG00000013944) #20	SLC37A1 (ENSPTRG00000013945) #21	PDE9A (ENSPTRG00000013946) #22	WDR4 (ENSPTRG00000013948) #24	NDUFV3 (ENSPTRG00000047245) #25	ERVH48-1 (ENSPTRG00000051369)	PKNOX1 (ENSPTRG00000013950) #26	CBS (ENSPTRG00000013951) #27	ENSPTRG00000013952 #28	ENSPTRG00000044914	CRYAA (ENSPTRG00000013953) #29	SIK1 (ENSPTRG00000013954) #30	HSF2BP (ENSPTRG00000013957) #32	RRP1B (ENSPTRG00000013958) #33	PDXK (ENSPTRG00000040962) #34	CSTB (ENSPTRG00000048077) #35	RRP1 (ENSPTRG00000013962) #36	AGPAT3 (ENSPTRG00000042805) #37
Human	MODERN SPECIES	13	MX1 (ENSG00000157601)	TMPRSS2 (ENSG00000184012) #7	RIPK4 (ENSG00000183421) #8	PRDM15 (ENSG00000141956) #9	C2CD2 (ENSG00000157617) #10	ZBTB21 (ENSG00000173276) #11	UMODL1 (ENSG00000177398) #12	ABCG1 (ENSG00000160179) #13	TFF3 (ENSG00000160180) #14	TFF2 (ENSG00000160181) #16	TFF1 (ENSG00000160182) #17	TMPRSS3 (ENSG00000160183) #18	UBASH3A (ENSG00000160185) #19	RSPH1 (ENSG00000160188) #20	SLC37A1 (ENSG00000160190) #21	PDE9A (ENSG00000160191) #22	WDR4 (ENSG00000160193) #24	NDUFV3 (ENSG00000160194) #25	ERVH48-1 (ENSG00000233056)	PKNOX1 (ENSG00000160199) #26	CBS (ENSG00000160200) #27	U2AF1 (ENSG00000160201) #28	CRYAA (ENSG00000160202) #29	SIK1 (ENSG00000142178) #30	HSF2BP (ENSG00000160207) #32	H2BC12L (ENSG00000234289)	RRP1B (ENSG00000160208) #33	PDXK (ENSG00000160209) #34	CSTB (ENSG00000160213) #35	RRP1 (ENSG00000160214) #36	AGPAT3 (ENSG00000160216) #37
Gorilla	MODERN SPECIES	12	MX2 (ENSGGOG00000001554)	MX1 (ENSGGOG00000001560)	TMPRSS2 (ENSGGOG00000004836) #7	RIPK4 (ENSGGOG00000015422) #8	PRDM15 (ENSGGOG00000011345) #9	C2CD2 (ENSGGOG00000013707) #10	UMODL1 (ENSGGOG00000008453) #12	ENSGGOG00000014667 #13	TFF3 (ENSGGOG00000014678) #14	TFF2 (ENSGGOG00000014685) #16	TFF1 (ENSGGOG00000014689) #17	TMPRSS3 (ENSGGOG00000007461) #18	UBASH3A (ENSGGOG00000012038) #19	RSPH1 (ENSGGOG00000012051) #20	SLC37A1 (ENSGGOG00000012067) #21	PDE9A (ENSGGOG00000014263) #22	WDR4 (ENSGGOG00000016652) #24	NDUFV3 (ENSGGOG00000014547) #25	ERVH48-1 (ENSGGOG00000037204)	PKNOX1 (ENSGGOG00000013783) #26	CBS (ENSGGOG00000010251) #27	ENSGGOG00000038883	CRYAA (ENSGGOG00000010345) #29	SIK1 (ENSGGOG00000007792) #30	HSF2BP (ENSGGOG00000012059) #32	RRP1B (ENSGGOG00000012069) #33	PDXK (ENSGGOG00000003904) #34	CSTB (ENSGGOG00000024406) #35	RRP1 (ENSGGOG00000000173) #36	AGPAT3 (ENSGGOG00000043336) #37	ENSGGOG00000044032
Orangutan	MODERN SPECIES	12	MX1 (ENSPPYG00000011437)	TMPRSS2 (ENSPPYG00000011438) #7	RIPK4 (ENSPPYG00000011440) #8	PRDM15 (ENSPPYG00000011441) #9	C2CD2 (ENSPPYG00000011442) #10	ZBTB21 (ENSPPYG00000011443) #11	UMODL1 (ENSPPYG00000011445) #12	ABCG1 (ENSPPYG00000011448) #13	ENSPPYG00000011449 #14	TFF2 (ENSPPYG00000011450) #16	TFF1 (ENSPPYG00000011451) #17	TMPRSS3 (ENSPPYG00000011452) #18	UBASH3A (ENSPPYG00000011453) #19	ENSPPYG00000011454 #20	SLC37A1 (ENSPPYG00000011455) #21	PDE9A (ENSPPYG00000011457) #22	WDR4 (ENSPPYG00000011458) #24	NDUFV3 (ENSPPYG00000011459) #25	ERVH48-1 (ENSPPYG00000032563)	PKNOX1 (ENSPPYG00000011461) #26	ENSPPYG00000041500	CBS (ENSPPYG00000011462) #27	U2AF1 (ENSPPYG00000011463) #28	ENSPPYG00000040498	ENSPPYG00000011465 #29	SIK1 (ENSPPYG00000011466) #30	ENSPPYG00000011469 #32	RRP1B (ENSPPYG00000011470) #33	PDXK (ENSPPYG00000019998) #34	CSTB (ENSPPYG00000036267) #35	RRP1 (ENSPPYG00000011474) #36
Gibbon	MODERN SPECIES	17	MX1 (ENSNLEG00000008634)	TMPRSS2 (ENSNLEG00000008677) #7	RIPK4 (ENSNLEG00000008693) #8	PRDM15 (ENSNLEG00000014454) #9	C2CD2 (ENSNLEG00000033883) #10	ZBTB21 (ENSNLEG00000014479) #11	UMODL1 (ENSNLEG00000014490) #12	ABCG1 (ENSNLEG00000028849) #13	TFF3 (ENSNLEG00000014549) #14	TFF2 (ENSNLEG00000014551) #16	TFF1 (ENSNLEG00000014554) #17	TMPRSS3 (ENSNLEG00000014558) #18	UBASH3A (ENSNLEG00000014571) #19	RSPH1 (ENSNLEG00000014607) #20	SLC37A1 (ENSNLEG00000014623) #21	PDE9A (ENSNLEG00000014628) #22	WDR4 (ENSNLEG00000014641) #24	NDUFV3 (ENSNLEG00000014663) #25	ERVH48-1 (ENSNLEG00000027799)	PKNOX1 (ENSNLEG00000014675) #26	CBS (ENSNLEG00000029685) #27	U2AF1 (ENSNLEG00000030710) #28	ENSNLEG00000033479	CRYAA (ENSNLEG00000014752) #29	SIK1 (ENSNLEG00000001409) #30	HSF2BP (ENSNLEG00000034577) #32	RRP1B (ENSNLEG00000001490) #33	PDXK (ENSNLEG00000001565) #34	ENSNLEG00000028797	ENSNLEG00000001583 #35	RRP1 (ENSNLEG00000034734) #36
Cercopithecidae	ANCESTRAL SPECIES	28	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00410000028657	ENSGT00860000136018	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT01000000215029	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a.ge #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.nb #35	ENSGT00860000135708	ENSGT00940000154826.ob #35	ENSGT00390000011821.b #36
Rhinopithecus	ANCESTRAL SPECIES	241		ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00860000136018	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a.ge #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00910000147350
Golden snub-nosed monkey	MODERN SPECIES	2404		ENSRROG00000026949	C2CD2 (ENSRROG00000009589) #10	ZBTB21 (ENSRROG00000031872) #11	UMODL1 (ENSRROG00000034007) #12	ENSRROG00000030472	ABCG1 (ENSRROG00000045570) #13	ENSRROG00000041986	TFF3 (ENSRROG00000043978) #14	TFF2 (ENSRROG00000032376) #16	TFF1 (ENSRROG00000029183) #17	TMPRSS3 (ENSRROG00000035661) #18	UBASH3A (ENSRROG00000033109) #19	RSPH1 (ENSRROG00000028683) #20	SLC37A1 (ENSRROG00000036324) #21	PDE9A (ENSRROG00000040954) #22	WDR4 (ENSRROG00000040334) #24	NDUFV3 (ENSRROG00000029833) #25	PKNOX1 (ENSRROG00000036545) #26	CBS (ENSRROG00000019033) #27	ENSRROG00000036664 #28	CRYAA (ENSRROG00000032687) #29	SIK1 (ENSRROG00000023899) #30	ENSRROG00000041366
Black snub-nosed monkey	MODERN SPECIES	1754	RIPK4 (ENSRBIG00000040951) #8	PRDM15 (ENSRBIG00000014955) #9	C2CD2 (ENSRBIG00000000891) #10	ENSRBIG00000029661	ZBTB21 (ENSRBIG00000032709) #11	UMODL1 (ENSRBIG00000030886) #12	ABCG1 (ENSRBIG00000027223) #13	ENSRBIG00000041549	TFF3 (ENSRBIG00000039405) #14	TFF2 (ENSRBIG00000037984) #16	TFF1 (ENSRBIG00000032818) #17	TMPRSS3 (ENSRBIG00000008799) #18	UBASH3A (ENSRBIG00000039440) #19	RSPH1 (ENSRBIG00000033428) #20	SLC37A1 (ENSRBIG00000035816) #21	PDE9A (ENSRBIG00000028089) #22	WDR4 (ENSRBIG00000044014) #24	NDUFV3 (ENSRBIG00000033466) #25
Cercopithecinae	ANCESTRAL SPECIES	23	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00410000028657	ENSGT00860000136018	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT01000000215029	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a.ge #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.nb.a.b #35	ENSGT00860000135708	ENSGT00940000154826.ob #35	ENSGT00390000011821.b #36
Vervet Monkey	MODERN SPECIES	11	RIPK4 (ENSCSAG00000008221) #8	PRDM15 (ENSCSAG00000008213) #9	C2CD2 (ENSCSAG00000008199) #10	ZBTB21 (ENSCSAG00000000279) #11	UMODL1 (ENSCSAG00000008176) #12	ENSCSAG00000000278	ABCG1 (ENSCSAG00000008143) #13	TFF3 (ENSCSAG00000008136) #14	TFF2 (ENSCSAG00000008132) #16	TFF1 (ENSCSAG00000008127) #17	TMPRSS3 (ENSCSAG00000008120) #18	UBASH3A (ENSCSAG00000008109) #19	RSPH1 (ENSCSAG00000008099) #20	SLC37A1 (ENSCSAG00000008088) #21	ENSCSAG00000008076	PDE9A (ENSCSAG00000008068) #22	WDR4 (ENSCSAG00000008058) #24	NDUFV3 (ENSCSAG00000008049) #25	PKNOX1 (ENSCSAG00000008042) #26	CBS (ENSCSAG00000008036) #27	U2AF1 (ENSCSAG00000008019) #28	CRYAA (ENSCSAG00000007988) #29	SIK1 (ENSCSAG00000007979) #30	HSF2BP (ENSCSAG00000007970) #32	RRP1B (ENSCSAG00000007961) #33	PDXK (ENSCSAG00000007949) #34	ENSCSAG00000007941 #35	RRP1 (ENSCSAG00000007936) #36	AGPAT3 (ENSCSAG00000007926) #37	TRAPPC10 (ENSCSAG00000007920)	PWP2 (ENSCSAG00000007903)
Cercopithecinae_a	ANCESTRAL SPECIES	22	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00860000136018	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT01000000215029.c	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a.ge #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00910000147350	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00860000135708	ENSGT00940000154826.ob #35	ENSGT00390000011821.b #36
Macaca	ANCESTRAL SPECIES	3	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00860000136018	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT01000000215029.c	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a.ge #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00910000147350	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.ob #35	ENSGT00860000135708	ENSGT00940000154826.nb.b #35
Pig-tailed macaque	MODERN SPECIES	503	TMPRSS2 (ENSMNEG00000029183) #7	RIPK4 (ENSMNEG00000024370) #8	PRDM15 (ENSMNEG00000041997) #9	C2CD2 (ENSMNEG00000043656) #10	ZBTB21 (ENSMNEG00000028147) #11	UMODL1 (ENSMNEG00000005265) #12	ENSMNEG00000037122	ABCG1 (ENSMNEG00000030770) #13	TFF3 (ENSMNEG00000044665) #14	TFF2 (ENSMNEG00000043148) #16	TFF1 (ENSMNEG00000040403) #17	TMPRSS3 (ENSMNEG00000034522) #18	UBASH3A (ENSMNEG00000030168) #19	RSPH1 (ENSMNEG00000041436) #20	SLC37A1 (ENSMNEG00000035150) #21	PDE9A (ENSMNEG00000035281) #22	WDR4 (ENSMNEG00000033682) #24	NDUFV3 (ENSMNEG00000031842) #25	ERVH48-1 (ENSMNEG00000016913)	PKNOX1 (ENSMNEG00000035609) #26	CBS (ENSMNEG00000039488) #27	U2AF1 (ENSMNEG00000030283) #28	CRYAA (ENSMNEG00000005656) #29	SIK1 (ENSMNEG00000033778) #30	ENSMNEG00000025872	HSF2BP (ENSMNEG00000038532) #32	RRP1B (ENSMNEG00000034269) #33	ENSMNEG00000041372	PDXK (ENSMNEG00000045284) #34	CSTB (ENSMNEG00000029992) #35	RRP1 (ENSMNEG00000031210) #36
Macaca_a	ANCESTRAL SPECIES	22	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT01000000215029.c	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a.ge #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00910000147350	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.ob #35	ENSGT00390000011821.b #36	ENSGT01020000234487
Crab-eating macaque	MODERN SPECIES	13	ENSMFAG00000063892	RIPK4 (ENSMFAG00000044571) #8	PRDM15 (ENSMFAG00000042871) #9	C2CD2 (ENSMFAG00000032505) #10	ZBTB21 (ENSMFAG00000000518) #11	UMODL1 (ENSMFAG00000039195) #12	ABCG1 (ENSMFAG00000035347) #13	TFF3 (ENSMFAG00000045102) #14	TFF2 (ENSMFAG00000057433) #16	TFF1 (ENSMFAG00000030916) #17	TMPRSS3 (ENSMFAG00000003673) #18	UBASH3A (ENSMFAG00000031488) #19	ENSMFAG00000060166	RSPH1 (ENSMFAG00000043304) #20	SLC37A1 (ENSMFAG00000036570) #21	PDE9A (ENSMFAG00000036884) #22	WDR4 (ENSMFAG00000045992) #24	NDUFV3 (ENSMFAG00000044552) #25	ENSMFAG00000020678	ENSMFAG00000051957	PKNOX1 (ENSMFAG00000039213) #26	ENSMFAG00000063594	CBS (ENSMFAG00000038794) #27	ENSMFAG00000032317 #28	CRYAA (ENSMFAG00000036551) #29	SIK1 (ENSMFAG00000032324) #30	ENSMFAG00000063691	HSF2BP (ENSMFAG00000041607) #32	RRP1B (ENSMFAG00000039152) #33	ENSMFAG00000056006	PDXK (ENSMFAG00000042485) #34
Rhesus	MODERN SPECIES	13	MX1 (ENSMMUG00000015329)	TMPRSS2 (ENSMMUG00000015332) #7	RIPK4 (ENSMMUG00000018043) #8	PRDM15 (ENSMMUG00000018046) #9	C2CD2 (ENSMMUG00000007030) #10	ZBTB21 (ENSMMUG00000018053) #11	UMODL1 (ENSMMUG00000018057) #12	ABCG1 (ENSMMUG00000018058) #13	TFF3 (ENSMMUG00000062860) #14	TFF2 (ENSMMUG00000064839) #16	TFF1 (ENSMMUG00000050587) #17	TMPRSS3 (ENSMMUG00000018079) #18	UBASH3A (ENSMMUG00000018081) #19	RSPH1 (ENSMMUG00000018084) #20	SLC37A1 (ENSMMUG00000018085) #21	PDE9A (ENSMMUG00000022107) #22	WDR4 (ENSMMUG00000062729) #24	NDUFV3 (ENSMMUG00000001553) #25	ENSMMUG00000044879	PKNOX1 (ENSMMUG00000009288) #26	CBS (ENSMMUG00000009289) #27	U2AF1 (ENSMMUG00000022769) #28	CRYAA (ENSMMUG00000020271) #29	SIK1 (ENSMMUG00000020050) #30	HSF2BP (ENSMMUG00000022791) #32	RRP1B (ENSMMUG00000000104) #33	PDXK (ENSMMUG00000062457) #34	CSTB (ENSMMUG00000012303) #35	RRP1 (ENSMMUG00000012304) #36	AGPAT3 (ENSMMUG00000045179) #37	TRAPPC10 (ENSMMUG00000005269)
Cercopithecinae_b	ANCESTRAL SPECIES	29	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00860000136018	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT01000000215029.c	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a.ge #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00910000147350	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00860000135708	ENSGT00940000154826.ob #35	ENSGT00390000011821.b #36
Cercopithecinae_d	ANCESTRAL SPECIES	36	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00860000136018	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT01000000215029.c	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a.ge #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00910000147350	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00860000135708	ENSGT00940000154826.ob #35	ENSGT00390000011821.b #36
Drill	MODERN SPECIES	1420		RIPK4 (ENSMLEG00000022911) #8	PRDM15 (ENSMLEG00000042202) #9	C2CD2 (ENSMLEG00000043976) #10	ZBTB21 (ENSMLEG00000037203) #11	UMODL1 (ENSMLEG00000036713) #12	ENSMLEG00000027543	ABCG1 (ENSMLEG00000034812) #13	TFF3 (ENSMLEG00000039530) #14	TFF2 (ENSMLEG00000039983) #16	TFF1 (ENSMLEG00000030600) #17	TMPRSS3 (ENSMLEG00000034619) #18	UBASH3A (ENSMLEG00000044085) #19	RSPH1 (ENSMLEG00000030513) #20	SLC37A1 (ENSMLEG00000026776) #21	PDE9A (ENSMLEG00000027650) #22	WDR4 (ENSMLEG00000042177) #24	NDUFV3 (ENSMLEG00000042871) #25	ERVH48-1 (ENSMLEG00000001600)	PKNOX1 (ENSMLEG00000037117) #26	CBS (ENSMLEG00000041980) #27	ENSMLEG00000029446 #28	CRYAA (ENSMLEG00000039416) #29	SIK1 (ENSMLEG00000030826) #30	ENSMLEG00000034490	HSF2BP (ENSMLEG00000042323) #32	RRP1B (ENSMLEG00000040044) #33	ENSMLEG00000002822	PDXK (ENSMLEG00000015398) #34	ENSMLEG00000031224 #35	RRP1 (ENSMLEG00000037797) #36
Sooty mangabey	MODERN SPECIES	465	MX1 (ENSCATG00000036673)	TMPRSS2 (ENSCATG00000035193) #7	RIPK4 (ENSCATG00000044519) #8	PRDM15 (ENSCATG00000034002) #9	C2CD2 (ENSCATG00000041335) #10	ZBTB21 (ENSCATG00000031344) #11	UMODL1 (ENSCATG00000042383) #12	ABCG1 (ENSCATG00000015933) #13	TFF3 (ENSCATG00000039028) #14	TFF2 (ENSCATG00000002257) #16	TFF1 (ENSCATG00000042160) #17	TMPRSS3 (ENSCATG00000003510) #18	UBASH3A (ENSCATG00000028990) #19	RSPH1 (ENSCATG00000037984) #20	SLC37A1 (ENSCATG00000031505) #21	PDE9A (ENSCATG00000039788) #22	WDR4 (ENSCATG00000042955) #24	NDUFV3 (ENSCATG00000043099) #25	ERVH48-1 (ENSCATG00000032142)	PKNOX1 (ENSCATG00000033829) #26	CBS (ENSCATG00000037956) #27	ENSCATG00000044934 #28	CRYAA (ENSCATG00000044220) #29	SIK1 (ENSCATG00000037666) #30	ENSCATG00000015361	HSF2BP (ENSCATG00000041814) #32	RRP1B (ENSCATG00000017423) #33	PDXK (ENSCATG00000037302) #34	ENSCATG00000042137 #35	RRP1 (ENSCATG00000015632) #36	AGPAT3 (ENSCATG00000027955) #37
Olive baboon	MODERN SPECIES	14	TMPRSS2 (ENSPANG00000015992) #7	RIPK4 (ENSPANG00000022205) #8	PRDM15 (ENSPANG00000006262) #9	C2CD2 (ENSPANG00000025139) #10	ZBTB21 (ENSPANG00000000728) #11	UMODL1 (ENSPANG00000020446) #12	ABCG1 (ENSPANG00000018700) #13	TFF3 (ENSPANG00000015993) #14	TFF2 (ENSPANG00000008679) #16	TFF1 (ENSPANG00000050733) #17	TMPRSS3 (ENSPANG00000040739) #18	UBASH3A (ENSPANG00000006263) #19	ENSPANG00000039438 #20	SLC37A1 (ENSPANG00000018651) #21	ENSPANG00000038329	PDE9A (ENSPANG00000023247) #22	WDR4 (ENSPANG00000006022) #24	NDUFV3 (ENSPANG00000020448) #25	ERVH48-1 (ENSPANG00000037967)	ENSPANG00000045532	PKNOX1 (ENSPANG00000023248) #26	CBS (ENSPANG00000023974) #27	U2AF1 (ENSPANG00000043157) #28	CRYAA (ENSPANG00000007618) #29	SIK1 (ENSPANG00000018553) #30	HSF2BP (ENSPANG00000023067) #32	RRP1B (ENSPANG00000011090) #33	ENSPANG00000007154 #35	RRP1 (ENSPANG00000015097) #36	TRAPPC10 (ENSPANG00000005640)	PWP2 (ENSPANG00000006267)
Platyrrhini	ANCESTRAL SPECIES	31	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00860000135708	ENSGT00940000154826.qb #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00910000147401
Cebidae	ANCESTRAL SPECIES	32	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a.h #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.qb #35	ENSGT00860000135708	ENSGT00940000154826.pb #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37
Marmoset	MODERN SPECIES	13	RIPK4 (ENSCJAG00000011251) #8	ENSCJAG00000085735	PRDM15 (ENSCJAG00000013815) #9	ENSCJAG00000013827 #10	ZBTB21 (ENSCJAG00000064368) #11	UMODL1 (ENSCJAG00000007292) #12	ENSCJAG00000082919	ABCG1 (ENSCJAG00000033076) #13	TFF3 (ENSCJAG00000077292) #14	TFF2 (ENSCJAG00000007364) #16	TFF1 (ENSCJAG00000007371) #17	TMPRSS3 (ENSCJAG00000007372) #18	UBASH3A (ENSCJAG00000007403) #19	RSPH1 (ENSCJAG00000005333) #20	SLC37A1 (ENSCJAG00000005291) #21	PDE9A (ENSCJAG00000085834) #22	WDR4 (ENSCJAG00000015778) #24	NDUFV3 (ENSCJAG00000015786) #25	PKNOX1 (ENSCJAG00000040086) #26	CBS (ENSCJAG00000015824) #27	U2AF1 (ENSCJAG00000015843) #28	CRYAA (ENSCJAG00000070733) #29	SIK1 (ENSCJAG00000015879) #30	HSF2BP (ENSCJAG00000059885) #32	RRP1B (ENSCJAG00000017077) #33	ENSCJAG00000043205 #34	ENSCJAG00000071745 #35	ENSCJAG00000052744	AGPAT3 (ENSCJAG00000086643) #37	ENSCJAG00000080531	TRAPPC10 (ENSCJAG00000005608)
Cebidae_a	ANCESTRAL SPECIES	29	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a.h #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196.m #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.qb #35	ENSGT00860000135708	ENSGT00940000154826.pb #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37
Bolivian squirrel monkey	MODERN SPECIES	66	FAM3B (ENSSBOG00000035878)	MX2 (ENSSBOG00000029626)	TMPRSS2 (ENSSBOG00000020098) #7	RIPK4 (ENSSBOG00000029180) #8	PRDM15 (ENSSBOG00000013278) #9	C2CD2 (ENSSBOG00000031814) #10	UMODL1 (ENSSBOG00000035786) #12	ABCG1 (ENSSBOG00000021366) #13	TFF3 (ENSSBOG00000024872) #14	TFF2 (ENSSBOG00000022921) #16	TFF1 (ENSSBOG00000032001) #17	TMPRSS3 (ENSSBOG00000024992) #18	UBASH3A (ENSSBOG00000030574) #19	RSPH1 (ENSSBOG00000035861) #20	SLC37A1 (ENSSBOG00000030217) #21	PDE9A (ENSSBOG00000027099) #22	WDR4 (ENSSBOG00000026351) #24	NDUFV3 (ENSSBOG00000019466) #25	ENSSBOG00000004329	PKNOX1 (ENSSBOG00000018950) #26	CBS (ENSSBOG00000022215) #27	U2AF1 (ENSSBOG00000027084) #28	CRYAA (ENSSBOG00000026135) #29	SIK1 (ENSSBOG00000033825) #30	HSF2BP (ENSSBOG00000031228) #32	RRP1B (ENSSBOG00000034727) #33	ENSSBOG00000033475	PDXK (ENSSBOG00000023925) #34	ENSSBOG00000021578 #35	RRP1 (ENSSBOG00000034689) #36	AGPAT3 (ENSSBOG00000026342) #37
Capuchin	MODERN SPECIES	112	RIPK4 (ENSCCAG00000029896) #8	PRDM15 (ENSCCAG00000030489) #9	ENSCCAG00000029556 #10	ZBTB21 (ENSCCAG00000037414) #11	ENSCCAG00000030168	UMODL1 (ENSCCAG00000028529) #12	ABCG1 (ENSCCAG00000022414) #13	TFF3 (ENSCCAG00000022195) #14	TFF2 (ENSCCAG00000022205) #16	TFF1 (ENSCCAG00000022303) #17	TMPRSS3 (ENSCCAG00000038076) #18	UBASH3A (ENSCCAG00000029676) #19	RSPH1 (ENSCCAG00000029158) #20	SLC37A1 (ENSCCAG00000033553) #21	ENSCCAG00000033172	PDE9A (ENSCCAG00000001044) #22	WDR4 (ENSCCAG00000022755) #24	ENSCCAG00000022392 #25	PKNOX1 (ENSCCAG00000022902) #26	CBS (ENSCCAG00000032722) #27	U2AF1 (ENSCCAG00000036938) #28	CRYAA (ENSCCAG00000030217) #29	SIK1 (ENSCCAG00000028295) #30	HSF2BP (ENSCCAG00000031814) #32	RRP1B (ENSCCAG00000029384) #33	ENSCCAG00000001912	PDXK (ENSCCAG00000035149) #34	ENSCCAG00000030098 #35	RRP1 (ENSCCAG00000029828) #36	AGPAT3 (ENSCCAG00000035106) #37	ENSCCAG00000022399
Mas night monkey	MODERN SPECIES	1376	MX1 (ENSANAG00000032841)	TMPRSS2 (ENSANAG00000031604) #7	RIPK4 (ENSANAG00000030821) #8	PRDM15 (ENSANAG00000023230) #9	C2CD2 (ENSANAG00000021285) #10	ZBTB21 (ENSANAG00000020407) #11	UMODL1 (ENSANAG00000030497) #12	ABCG1 (ENSANAG00000025567) #13	TFF3 (ENSANAG00000033542) #14	TFF2 (ENSANAG00000033470) #16	TFF1 (ENSANAG00000032792) #17	TMPRSS3 (ENSANAG00000030095) #18	UBASH3A (ENSANAG00000022507) #19	RSPH1 (ENSANAG00000035302) #20	SLC37A1 (ENSANAG00000028307) #21	PDE9A (ENSANAG00000037833) #22	WDR4 (ENSANAG00000026274) #24	NDUFV3 (ENSANAG00000026013) #25	PKNOX1 (ENSANAG00000022045) #26	CBS (ENSANAG00000032848) #27	ENSANAG00000026034 #28	CRYAA (ENSANAG00000021687) #29	SIK1 (ENSANAG00000038083) #30	HSF2BP (ENSANAG00000037216) #32	RRP1B (ENSANAG00000034889) #33	ENSANAG00000033810	PDXK (ENSANAG00000019464) #34	ENSANAG00000038089 #35	RRP1 (ENSANAG00000037815) #36	ENSANAG00000036034 #37	ENSANAG00000035921
Tarsier	MODERN SPECIES	6572										TFF2 (ENSTSYG00000002728) #16	TFF1 (ENSTSYG00000031507) #17	TMPRSS3 (ENSTSYG00000006284) #18	UBASH3A (ENSTSYG00000014197) #19	RSPH1 (ENSTSYG00000025941) #20	SLC37A1 (ENSTSYG00000001307) #21	PDE9A (ENSTSYG00000011567) #22	WDR4 (ENSTSYG00000000062) #24	NDUFV3 (ENSTSYG00000007944) #25
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Lemuriformes	ANCESTRAL SPECIES	9	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Lemuriformes_a	ANCESTRAL SPECIES	195						ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.x #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30
Coquerels sifaka	MODERN SPECIES	797						ZBTB21 (ENSPCOG00000021545) #11	UMODL1 (ENSPCOG00000022199) #12	ABCG1 (ENSPCOG00000015593) #13	TFF3 (ENSPCOG00000023385) #14	TFF2 (ENSPCOG00000024477) #16	TFF1 (ENSPCOG00000026713) #17	TMPRSS3 (ENSPCOG00000015816) #18	UBASH3A (ENSPCOG00000023333) #19	RSPH1 (ENSPCOG00000000459) #20	SLC37A1 (ENSPCOG00000027538) #21	PDE9A (ENSPCOG00000011154) #22	WDR4 (ENSPCOG00000025182) #24	ENSPCOG00000016389 #25	PKNOX1 (ENSPCOG00000017461) #26	CBS (ENSPCOG00000018453) #27	ENSPCOG00000019191 #28	CRYAA (ENSPCOG00000016562) #29	SIK1 (ENSPCOG00000014492) #30
Greater bamboo lemur	MODERN SPECIES	468								ABCG1 (ENSPSMG00000020310) #13	TFF3 (ENSPSMG00000020291) #14	TFF2 (ENSPSMG00000020283) #16	TFF1 (ENSPSMG00000020281) #17	TMPRSS3 (ENSPSMG00000020264) #18	UBASH3A (ENSPSMG00000020207) #19	RSPH1 (ENSPSMG00000020122) #20	SLC37A1 (ENSPSMG00000020102) #21	PDE9A (ENSPSMG00000020016) #22	ITGB2 (ENSPSMG00000019806)	WDR4 (ENSPSMG00000019685) #24	ENSPSMG00000019670 #25	PKNOX1 (ENSPSMG00000019662) #26	CBS (ENSPSMG00000019632) #27	ENSPSMG00000019553 #28	CRYAA (ENSPSMG00000019469) #29	SIK1 (ENSPSMG00000019446) #30
Mouse lemur	MODERN SPECIES	24	SLC19A1 (ENSMICG00000035898)	COL18A1 (ENSMICG00000037125)	POFUT2 (ENSMICG00000035479)	ADARB1 (ENSMICG00000008433)	SLX9 (ENSMICG00000047718)	ITGB2 (ENSMICG00000002984)	PTTG1IP (ENSMICG00000028388)	SUMO3 (ENSMICG00000036688)	UBE2G2 (ENSMICG00000013001)	TFF2 (ENSMICG00000011183) #16	TFF1 (ENSMICG00000045652) #17	TMPRSS3 (ENSMICG00000005497) #18	UBASH3A (ENSMICG00000000050) #19	RSPH1 (ENSMICG00000000051) #20	SLC37A1 (ENSMICG00000000053) #21	PDE9A (ENSMICG00000016258) #22	WDR4 (ENSMICG00000042106) #24	NDUFV3 (ENSMICG00000046617) #25	PKNOX1 (ENSMICG00000037878) #26	CBS (ENSMICG00000041663) #27	U2AF1 (ENSMICG00000013835) #28	CRYAA (ENSMICG00000035380) #29	ENSMICG00000035845	ENSMICG00000029407	SIK1 (ENSMICG00000000552) #30	HSF2BP (ENSMICG00000004680) #32	RRP1B (ENSMICG00000004686) #33	PDXK (ENSMICG00000004696) #34	CSTB (ENSMICG00000031601) #35	RRP1 (ENSMICG00000004700) #36	AGPAT3 (ENSMICG00000047320) #37
Bushbaby	MODERN SPECIES	243	TMPRSS2 (ENSOGAG00000009520) #7	RIPK4 (ENSOGAG00000015484) #8	PRDM15 (ENSOGAG00000006444) #9	C2CD2 (ENSOGAG00000006465) #10	ZBTB21 (ENSOGAG00000014370) #11	ENSOGAG00000026493	ENSOGAG00000005904 #12	ABCG1 (ENSOGAG00000012289) #13	TFF3 (ENSOGAG00000014507) #14	TFF2 (ENSOGAG00000014510) #16	TFF1 (ENSOGAG00000032775) #17	TMPRSS3 (ENSOGAG00000014513) #18	UBASH3A (ENSOGAG00000015734) #19	RSPH1 (ENSOGAG00000015738) #20	SLC37A1 (ENSOGAG00000015740) #21	PDE9A (ENSOGAG00000015745) #22	WDR4 (ENSOGAG00000003658) #24	ENSOGAG00000003661 #25	PKNOX1 (ENSOGAG00000003664) #26	CBS (ENSOGAG00000016500) #27	ENSOGAG00000032959	ENSOGAG00000016504 #28	CRYAA (ENSOGAG00000016506) #29	SIK1 (ENSOGAG00000000860) #30	HSF2BP (ENSOGAG00000009866) #32	RRP1B (ENSOGAG00000009872) #33	PDXK (ENSOGAG00000006093) #34	CSTB (ENSOGAG00000006101) #35	RRP1 (ENSOGAG00000006105) #36	AGPAT3 (ENSOGAG00000003775) #37	TRAPPC10 (ENSOGAG00000012463)
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873
Suina	ANCESTRAL SPECIES	35	ENSGT00940000163441.f.a.b	ENSGT00940000161526.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490.m #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873
Chacoan peccary	MODERN SPECIES	99	ENSCWAG00000012213	ENSCWAG00000012265	RIPK4 (ENSCWAG00000012285) #8	PRDM15 (ENSCWAG00000012386) #9	C2CD2 (ENSCWAG00000012763) #10	ZBTB21 (ENSCWAG00000012917) #11	UMODL1 (ENSCWAG00000012980) #12	ABCG1 (ENSCWAG00000013204) #13	TFF3 (ENSCWAG00000013544) #14	TFF2 (ENSCWAG00000013597) #16	TFF1 (ENSCWAG00000013623) #17	TMPRSS3 (ENSCWAG00000013680) #18	UBASH3A (ENSCWAG00000013971) #19	RSPH1 (ENSCWAG00000014210) #20	SLC37A1 (ENSCWAG00000014362) #21	PDE9A (ENSCWAG00000014566) #22	ENSCWAG00000017489	WDR4 (ENSCWAG00000017511) #24	ENSCWAG00000017536 #25	ENSCWAG00000017560	PKNOX1 (ENSCWAG00000017571) #26	CBS (ENSCWAG00000017655) #27	U2AF1 (ENSCWAG00000017723) #28	CRYAA (ENSCWAG00000017817) #29
Pig	MODERN SPECIES	4	ENSSSCG00000020673	ENSSSCG00000036487	RIPK4 (ENSSSCG00000012083) #8	PRDM15 (ENSSSCG00000012084) #9	C2CD2 (ENSSSCG00000025821) #10	ZBTB21 (ENSSSCG00000054999) #11	UMODL1 (ENSSSCG00000022290) #12	ABCG1 (ENSSSCG00000027745) #13	TFF3 (ENSSSCG00000022857) #14	TFF2 (ENSSSCG00000024320) #16	TFF1 (ENSSSCG00000034731) #17	TMPRSS3 (ENSSSCG00000022568) #18	UBASH3A (ENSSSCG00000029511) #19	RSPH1 (ENSSSCG00000040224) #20	SLC37A1 (ENSSSCG00000012087) #21	PDE9A (ENSSSCG00000030016) #22	WDR4 (ENSSSCG00000023078) #24	ENSSSCG00000021991 #25	PKNOX1 (ENSSSCG00000037663) #26	CBS (ENSSSCG00000040779) #27	U2AF1 (ENSSSCG00000033653) #28	CRYAA (ENSSSCG00000038816) #29	SIK1 (ENSSSCG00000035037) #30	ENSSSCG00000045186	ENSSSCG00000022164 #32	RRP1B (ENSSSCG00000021698) #33	PDXK (ENSSSCG00000034758) #34	CSTB (ENSSSCG00000027357) #35	RRP1 (ENSSSCG00000037061) #36	ENSSSCG00000057666	AGPAT3 (ENSSSCG00000038081) #37
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Camelidae	ANCESTRAL SPECIES		ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT01070000254012	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Arabian camel	MODERN SPECIES		ENSCDRG00005009585	RIPK4 (ENSCDRG00005009625) #8	PRDM15 (ENSCDRG00005009685) #9	C2CD2 (ENSCDRG00005009991) #10	ENSCDRG00005010047 #11	UMODL1 (ENSCDRG00005010088) #12	ABCG1 (ENSCDRG00005010367) #13	ENSCDRG00005010551 #14	TFF2 (ENSCDRG00005010588) #16	ENSCDRG00005010635	TFF1 (ENSCDRG00005010667) #17	TMPRSS3 (ENSCDRG00005010719) #18	UBASH3A (ENSCDRG00005010989) #19	RSPH1 (ENSCDRG00005011160) #20	SLC37A1 (ENSCDRG00005011351) #21	PDE9A (ENSCDRG00005011646) #22	WDR4 (ENSCDRG00005012149) #24	ENSCDRG00005012280 #25	PKNOX1 (ENSCDRG00005012370) #26	CBS (ENSCDRG00005012447) #27	U2AF1 (ENSCDRG00005012625) #28	CRYAA (ENSCDRG00005012871) #29	SIK1 (ENSCDRG00005012900) #30	HSF2BP (ENSCDRG00005013018) #32	RRP1B (ENSCDRG00005013083) #33	PDXK (ENSCDRG00005013153) #34	ENSCDRG00005013250 #35	RRP1 (ENSCDRG00005013286) #36	ENSCDRG00005013354	AGPAT3 (ENSCDRG00005013408) #37	TRAPPC10 (ENSCDRG00005013577)
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Pecora	ANCESTRAL SPECIES	8	ENSGT00940000161526.a	ENSGT00940000161526.b.j	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.rb.b #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Percora_a	ANCESTRAL SPECIES	7	ENSGT00940000161526.a	ENSGT00940000161526.b.j	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.rb.b #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Bovidae	ANCESTRAL SPECIES	9	ENSGT00940000161526.a	ENSGT00940000161526.b.j.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.rb.b #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Caprinae	ANCESTRAL SPECIES	8	ENSGT00960000187239	ENSGT00940000161526.b.j.a.a	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.rb.b #35	ENSGT00940000154826.rb.a.a #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873
Goat	MODERN SPECIES		ENSCHIG00000011563	ENSCHIG00000008117	RIPK4 (ENSCHIG00000012268) #8	PRDM15 (ENSCHIG00000016222) #9	C2CD2 (ENSCHIG00000012559) #10	ZBTB21 (ENSCHIG00000022184) #11	ENSCHIG00000016072 #12	ABCG1 (ENSCHIG00000007254) #13	TFF3 (ENSCHIG00000016300) #14	TFF2 (ENSCHIG00000026146) #16	TFF1 (ENSCHIG00000020308) #17	TMPRSS3 (ENSCHIG00000010400) #18	UBASH3A (ENSCHIG00000022525) #19	RSPH1 (ENSCHIG00000017478) #20	SLC37A1 (ENSCHIG00000019791) #21	PDE9A (ENSCHIG00000017496) #22	WDR4 (ENSCHIG00000022834) #24	ENSCHIG00000025996 #25	PKNOX1 (ENSCHIG00000019819) #26	CBS (ENSCHIG00000010679) #27	U2AF1 (ENSCHIG00000012917) #28	CRYAA (ENSCHIG00000025002) #29	SIK1 (ENSCHIG00000013044) #30	ENSCHIG00000019627	HSF2BP (ENSCHIG00000005444) #32	RRP1B (ENSCHIG00000021519) #33	PDXK (ENSCHIG00000008616) #34	ENSCHIG00000023504 #35	ENSCHIG00000018248 #35	RRP1 (ENSCHIG00000020948) #36	ENSCHIG00000024677
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020002770	RIPK4 (ENSOARG00020002780) #8	ENSOARG00020002794 #9	ENSOARG00020002815 #9	C2CD2 (ENSOARG00020002824) #10	ZBTB21 (ENSOARG00020002853) #11	UMODL1 (ENSOARG00020002885) #12	ABCG1 (ENSOARG00020003108) #13	TFF3 (ENSOARG00020003218) #14	TFF2 (ENSOARG00020003264) #16	TFF1 (ENSOARG00020003284) #17	TMPRSS3 (ENSOARG00020003322) #18	UBASH3A (ENSOARG00020003453) #19	RSPH1 (ENSOARG00020003566) #20	SLC37A1 (ENSOARG00020003631) #21	PDE9A (ENSOARG00020003783) #22	WDR4 (ENSOARG00020005224) #24	NDUFV3 (ENSOARG00020005254) #25	PKNOX1 (ENSOARG00020005292) #26	CBS (ENSOARG00020005385) #27	U2AF1 (ENSOARG00020005608) #28	CRYAA (ENSOARG00020005666) #29	SIK1 (ENSOARG00020005689) #30	HSF2BP (ENSOARG00020005745) #32	PDXK (ENSOARG00020005802) #34	CSTB (ENSOARG00020005932) #35	RRP1 (ENSOARG00020005964) #36	AGPAT3 (ENSOARG00020005985) #37	ENSOARG00020006019	TRAPPC10 (ENSOARG00020006030)	PWP2 (ENSOARG00020006076)
Bovinae	ANCESTRAL SPECIES	6	ENSGT00940000161526.a	ENSGT00940000161526.b.j.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.rb.b #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Bos	ANCESTRAL SPECIES	7	ENSGT00940000161526.b.j.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.b.b.a.a.a.a.a.a.b.b.a	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.rb.b #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Bos_a	ANCESTRAL SPECIES	5	ENSGT00940000161526.b.j.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.b.b.a.a.a.a.a.a.b.b.a	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.rb.b #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Wild yak	MODERN SPECIES	2112										TFF2 (ENSBMUG00000012220) #16	ENSBMUG00000012234 #17	TMPRSS3 (ENSBMUG00000012249) #18	UBASH3A (ENSBMUG00000012299) #19	RSPH1 (ENSBMUG00000012341) #20	SLC37A1 (ENSBMUG00000012379) #21	PDE9A (ENSBMUG00000012397) #22	WDR4 (ENSBMUG00000012436) #24	ENSBMUG00000012491 #25	PKNOX1 (ENSBMUG00000012508) #26	CBS (ENSBMUG00000012649) #27	U2AF1 (ENSBMUG00000012755) #28	CRYAA (ENSBMUG00000012764) #29	SIK1 (ENSBMUG00000012772) #30	HSF2BP (ENSBMUG00000012808) #32	RRP1B (ENSBMUG00000012932) #33	PDXK (ENSBMUG00000013006) #34	ENSBMUG00000013071 #35	RRP1 (ENSBMUG00000013086) #36	AGPAT3 (ENSBMUG00000013195) #37	TRAPPC10 (ENSBMUG00000013261)	PWP2 (ENSBMUG00000013296)
Domestic yak	MODERN SPECIES		ENSBGRG00000014892	RIPK4 (ENSBGRG00000014918) #8	PRDM15 (ENSBGRG00000014984) #9	ENSBGRG00000015730	C2CD2 (ENSBGRG00000015751) #10	ZBTB21 (ENSBGRG00000016033) #11	UMODL1 (ENSBGRG00000016109) #12	ABCG1 (ENSBGRG00000017210) #13	TFF3 (ENSBGRG00000017602) #14	TFF2 (ENSBGRG00000017623) #16	TFF1 (ENSBGRG00000017683) #17	TMPRSS3 (ENSBGRG00000017740) #18	UBASH3A (ENSBGRG00000018065) #19	RSPH1 (ENSBGRG00000018504) #20	SLC37A1 (ENSBGRG00000018757) #21	PDE9A (ENSBGRG00000019109) #22	WDR4 (ENSBGRG00000019836) #24	ENSBGRG00000019941 #25	PKNOX1 (ENSBGRG00000020052) #26	CBS (ENSBGRG00000020259) #27	U2AF1 (ENSBGRG00000020541) #28	CRYAA (ENSBGRG00000020662) #29	SIK1 (ENSBGRG00000020700) #30	HSF2BP (ENSBGRG00000020817) #32	RRP1B (ENSBGRG00000021030) #33	PDXK (ENSBGRG00000021296) #34	ENSBGRG00000021603 #35	RRP1 (ENSBGRG00000021680) #36	AGPAT3 (ENSBGRG00000021804) #37	TRAPPC10 (ENSBGRG00000021882)	PWP2 (ENSBGRG00000022101)
Bos_b	ANCESTRAL SPECIES	5	ENSGT00940000161526.b.j.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.b.b.a.a.a.a.a.a.b.b.a	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.rb.b #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Cow	MODERN SPECIES		ENSBTAG00000045771	ENSBTAG00000046015	RIPK4 (ENSBTAG00000021251) #8	PRDM15 (ENSBTAG00000021253) #9	C2CD2 (ENSBTAG00000021259) #10	ZBTB21 (ENSBTAG00000030836) #11	UMODL1 (ENSBTAG00000021270) #12	ABCG1 (ENSBTAG00000021272) #13	TFF3 (ENSBTAG00000021276) #14	TFF2 (ENSBTAG00000030814) #16	TFF1 (ENSBTAG00000048276) #17	TMPRSS3 (ENSBTAG00000021280) #18	UBASH3A (ENSBTAG00000023398) #19	RSPH1 (ENSBTAG00000021284) #20	SLC37A1 (ENSBTAG00000021286) #21	PDE9A (ENSBTAG00000021899) #22	WDR4 (ENSBTAG00000021490) #24	NDUFV3 (ENSBTAG00000021491) #25	PKNOX1 (ENSBTAG00000014153) #26	CBS (ENSBTAG00000000160) #27	U2AF1 (ENSBTAG00000011645) #28	CRYAA (ENSBTAG00000003134) #29	SIK1 (ENSBTAG00000011437) #30	HSF2BP (ENSBTAG00000017407) #32	RRP1B (ENSBTAG00000017418) #33	PDXK (ENSBTAG00000018186) #34	CSTB (ENSBTAG00000018189) #35	CSTB (ENSBTAG00000000524) #35	RRP1 (ENSBTAG00000003981) #36	AGPAT3 (ENSBTAG00000020456) #37	TRAPPC10 (ENSBTAG00000007100)
Hybrid Bos Indicus	MODERN SPECIES		ENSBIXG00005022411	RIPK4 (ENSBIXG00005022388) #8	PRDM15 (ENSBIXG00005022361) #9	ENSBIXG00005022313	C2CD2 (ENSBIXG00005022294) #10	ENSBIXG00005022244 #11	UMODL1 (ENSBIXG00005022204) #12	ABCG1 (ENSBIXG00005021948) #13	ENSBIXG00005021724 #14	TFF2 (ENSBIXG00005003655) #16	TFF1 (ENSBIXG00005021693) #17	TMPRSS3 (ENSBIXG00005021674) #18	UBASH3A (ENSBIXG00005021530) #19	RSPH1 (ENSBIXG00005021494) #20	SLC37A1 (ENSBIXG00005021424) #21	PDE9A (ENSBIXG00005021300) #22	ENSBIXG00005021172	WDR4 (ENSBIXG00005007357) #24	ENSBIXG00005003567 #25	ENSBIXG00005021053	PKNOX1 (ENSBIXG00005021038) #26	CBS (ENSBIXG00005020947) #27	U2AF1 (ENSBIXG00005020822) #28	CRYAA (ENSBIXG00005020745) #29	ENSBIXG00005020712	SIK1 (ENSBIXG00005003495) #30	HSF2BP (ENSBIXG00005020613) #32	RRP1B (ENSBIXG00005020578) #33	PDXK (ENSBIXG00005020496) #34	ENSBIXG00005020433 #35	RRP1 (ENSBIXG00005020372) #36
American bison	MODERN SPECIES	2975	MX1 (ENSBBBG00000013880)	TMPRSS2 (ENSBBBG00000013909) #7	ENSBBBG00000007548	RIPK4 (ENSBBBG00000013940) #8	PRDM15 (ENSBBBG00000013969) #9	C2CD2 (ENSBBBG00000003069) #10	UMODL1 (ENSBBBG00000003135) #12	ABCG1 (ENSBBBG00000003152) #13	TFF3 (ENSBBBG00000003155) #14	TFF2 (ENSBBBG00000009109) #16	TFF1 (ENSBBBG00000014105) #17	TMPRSS3 (ENSBBBG00000014114) #18	UBASH3A (ENSBBBG00000014132) #19	RSPH1 (ENSBBBG00000007983) #20	SLC37A1 (ENSBBBG00000014169) #21	PDE9A (ENSBBBG00000014410) #22	WDR4 (ENSBBBG00000014454) #24	NDUFV3 (ENSBBBG00000014463) #25	PKNOX1 (ENSBBBG00000003350) #26	CBS (ENSBBBG00000014597) #27	U2AF1 (ENSBBBG00000014640) #28	CRYAA (ENSBBBG00000014669) #29	SIK1 (ENSBBBG00000002847) #30	HSF2BP (ENSBBBG00000014691) #32	RRP1B (ENSBBBG00000003568) #33	PDXK (ENSBBBG00000003579) #34	CSTB (ENSBBBG00000007657) #35	RRP1 (ENSBBBG00000014788) #36	AGPAT3 (ENSBBBG00000003650) #37	TRAPPC10 (ENSBBBG00000007658)	PWP2 (ENSBBBG00000002805)
Siberian musk deer	MODERN SPECIES	1185	TMPRSS2 (ENSMMSG00000009350) #7	ENSMMSG00000009563	RIPK4 (ENSMMSG00000009579) #8	PRDM15 (ENSMMSG00000009607) #9	C2CD2 (ENSMMSG00000009701) #10	ZBTB21 (ENSMMSG00000009739) #11	UMODL1 (ENSMMSG00000009762) #12	ABCG1 (ENSMMSG00000009849) #13	TFF3 (ENSMMSG00000009944) #14	TFF2 (ENSMMSG00000009956) #16	TFF1 (ENSMMSG00000009981) #17	TMPRSS3 (ENSMMSG00000010004) #18	UBASH3A (ENSMMSG00000010155) #19	RSPH1 (ENSMMSG00000010274) #20	SLC37A1 (ENSMMSG00000010340) #21	PDE9A (ENSMMSG00000010433) #22	ENSMMSG00000010748	WDR4 (ENSMMSG00000010788) #24	NDUFV3 (ENSMMSG00000010825) #25	PKNOX1 (ENSMMSG00000010868) #26	CBS (ENSMMSG00000010935) #27	U2AF1 (ENSMMSG00000011040) #28	CRYAA (ENSMMSG00000011127) #29	SIK1 (ENSMMSG00000011154) #30	HSF2BP (ENSMMSG00000011223) #32	RRP1B (ENSMMSG00000011269) #33	PDXK (ENSMMSG00000011339) #34	CSTB (ENSMMSG00000011422) #35	RRP1 (ENSMMSG00000011447) #36	AGPAT3 (ENSMMSG00000011502) #37	TRAPPC10 (ENSMMSG00000011550)
Yarkand deer	MODERN SPECIES	10	ENSCHYG00000026590	ENSCHYG00000026595	RIPK4 (ENSCHYG00000026601) #8	PRDM15 (ENSCHYG00000026615) #9	C2CD2 (ENSCHYG00000007736) #10	ZBTB21 (ENSCHYG00000007803) #11	UMODL1 (ENSCHYG00000007853) #12	ABCG1 (ENSCHYG00000008044) #13	ENSCHYG00000008123 #14	TFF2 (ENSCHYG00000008137) #16	ENSCHYG00000008172 #17	TMPRSS3 (ENSCHYG00000008214) #18	UBASH3A (ENSCHYG00000008362) #19	RSPH1 (ENSCHYG00000008397) #20	SLC37A1 (ENSCHYG00000008438) #21	PDE9A (ENSCHYG00000008513) #22	WDR4 (ENSCHYG00000008871) #24	NDUFV3 (ENSCHYG00000008999) #25	PKNOX1 (ENSCHYG00000009096) #26	CBS (ENSCHYG00000009317) #27	ENSCHYG00000009600 #28	CRYAA (ENSCHYG00000009789) #29	SIK1 (ENSCHYG00000009832) #30	HSF2BP (ENSCHYG00000009993) #32	RRP1B (ENSCHYG00000010070) #33	PDXK (ENSCHYG00000010189) #34	ENSCHYG00000010380 #35	RRP1 (ENSCHYG00000010447) #36	AGPAT3 (ENSCHYG00000010566) #37	TRAPPC10 (ENSCHYG00000010651)	PWP2 (ENSCHYG00000010992)
Cetacea	ANCESTRAL SPECIES	10	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196.a #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874.k #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196.a #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874.k #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196.a #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874.k #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00950000182802.A.ab.b.b	ENSGT00940000159953.A	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196.a #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874.k #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Monodontidae	ANCESTRAL SPECIES	11	ENSGT01030000236716	ENSGT00940000159953.A	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196.a #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00940000163089.a.b	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874.k #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873
Beluga whale	MODERN SPECIES	111	ENSDLEG00000021198	ENSDLEG00000021194	RIPK4 (ENSDLEG00000021191) #8	PRDM15 (ENSDLEG00000021181) #9	C2CD2 (ENSDLEG00000021174) #10	ZBTB21 (ENSDLEG00000021171) #11	UMODL1 (ENSDLEG00000021156) #12	ABCG1 (ENSDLEG00000021150) #13	TFF3 (ENSDLEG00000021148) #14	TFF2 (ENSDLEG00000021145) #16	ENSDLEG00000021144 #17	TMPRSS3 (ENSDLEG00000021135) #18	UBASH3A (ENSDLEG00000021103) #19	RSPH1 (ENSDLEG00000021097) #20	SLC37A1 (ENSDLEG00000021092) #21	PDE9A (ENSDLEG00000021086) #22	WDR4 (ENSDLEG00000021081) #24	NDUFV3 (ENSDLEG00000021078) #25	PKNOX1 (ENSDLEG00000021076) #26	CBS (ENSDLEG00000021070) #27	U2AF1 (ENSDLEG00000021062) #28	CRYAA (ENSDLEG00000021056) #29	SIK1 (ENSDLEG00000021047) #30	ENSDLEG00000021045	HSF2BP (ENSDLEG00000021043) #32	RRP1B (ENSDLEG00000021037) #33	PDXK (ENSDLEG00000021031) #34	CSTB (ENSDLEG00000021029) #35	RRP1 (ENSDLEG00000021024) #36	AGPAT3 (ENSDLEG00000021021) #37	TRAPPC10 (ENSDLEG00000021015)
Narwhal	MODERN SPECIES	297	ENSMMNG00015003659	ENSMMNG00015003646	RIPK4 (ENSMMNG00015003627) #8	PRDM15 (ENSMMNG00015003594) #9	C2CD2 (ENSMMNG00015003489) #10	ZBTB21 (ENSMMNG00015003466) #11	UMODL1 (ENSMMNG00015003254) #12	ABCG1 (ENSMMNG00015003156) #13	TFF3 (ENSMMNG00015003140) #14	TFF2 (ENSMMNG00015003126) #16	ENSMMNG00015003110 #17	TMPRSS3 (ENSMMNG00015003078) #18	UBASH3A (ENSMMNG00015003040) #19	RSPH1 (ENSMMNG00015002990) #20	SLC37A1 (ENSMMNG00015002910) #21	PDE9A (ENSMMNG00015002827) #22	WDR4 (ENSMMNG00015002775) #24	NDUFV3 (ENSMMNG00015002750) #25	PKNOX1 (ENSMMNG00015002718) #26	CBS (ENSMMNG00015002675) #27	U2AF1 (ENSMMNG00015002628) #28	CRYAA (ENSMMNG00015002603) #29	SIK1 (ENSMMNG00015002567) #30	ENSMMNG00015002545	HSF2BP (ENSMMNG00015002511) #32	RRP1B (ENSMMNG00015002462) #33	PDXK (ENSMMNG00015002424) #34	CSTB (ENSMMNG00015002400) #35	RRP1 (ENSMMNG00015002366) #36	AGPAT3 (ENSMMNG00015002330) #37	TRAPPC10 (ENSMMNG00015002229)
Vaquita	MODERN SPECIES	15	TMPRSS2 (ENSPSNG00000004031) #7	ENSPSNG00000004058	ENSPSNG00000004073	RIPK4 (ENSPSNG00000004086) #8	PRDM15 (ENSPSNG00000004163) #9	C2CD2 (ENSPSNG00000004376) #10	ZBTB21 (ENSPSNG00000004418) #11	UMODL1 (ENSPSNG00000004496) #12	ENSPSNG00000004667 #13	TFF2 (ENSPSNG00000004686) #16	TFF1 (ENSPSNG00000004712) #17	TMPRSS3 (ENSPSNG00000004757) #18	UBASH3A (ENSPSNG00000004836) #19	RSPH1 (ENSPSNG00000004899) #20	SLC37A1 (ENSPSNG00000004936) #21	PDE9A (ENSPSNG00000005243) #22	WDR4 (ENSPSNG00000005893) #24	NDUFV3 (ENSPSNG00000005932) #25	PKNOX1 (ENSPSNG00000006002) #26	CBS (ENSPSNG00000009906) #27	U2AF1 (ENSPSNG00000010054) #28	CRYAA (ENSPSNG00000010191) #29	SIK1 (ENSPSNG00000010236) #30	HSF2BP (ENSPSNG00000010294) #32	RRP1B (ENSPSNG00000010341) #33	ENSPSNG00000010404 #34	ENSPSNG00000010486 #35	RRP1 (ENSPSNG00000010522) #36	AGPAT3 (ENSPSNG00000010576) #37	TRAPPC10 (ENSPSNG00000010640)	PWP2 (ENSPSNG00000010734)
Dolphin	MODERN SPECIES	1324																PDE9A (ENSTTRG00000009597) #22	WDR4 (ENSTTRG00000009683) #24	NDUFV3 (ENSTTRG00000009708) #25
Sperm whale	MODERN SPECIES	19	SUMO3 (ENSPCTG00005017367)	PFKL (ENSPCTG00005017230)	AIRE (ENSPCTG00005016581)	DNMT3L (ENSPCTG00005016240)	ICOSLG (ENSPCTG00005016088)	GATD3A (ENSPCTG00005015921)	PWP2 (ENSPCTG00005015641)	TRAPPC10 (ENSPCTG00005015440)	AGPAT3 (ENSPCTG00005015313) #37	CRYAA (ENSPCTG00005015249) #29	U2AF1 (ENSPCTG00005015178) #28	CSTB (ENSPCTG00005015015) #35	PDXK (ENSPCTG00005014904) #34	RRP1B (ENSPCTG00005014769) #33	HSF2BP (ENSPCTG00005014642) #32	PDE9A (ENSPCTG00005012834) #22	WDR4 (ENSPCTG00005012622) #24	NDUFV3 (ENSPCTG00005012543) #25	PKNOX1 (ENSPCTG00005012441) #26	CBS (ENSPCTG00005008728) #27	SLC37A1 (ENSPCTG00005008374) #21	RSPH1 (ENSPCTG00005008271) #20	UBASH3A (ENSPCTG00005008150) #19	TMPRSS3 (ENSPCTG00005008050) #18	TFF1 (ENSPCTG00005008027) #17	TFF2 (ENSPCTG00005008001) #16	TFF3 (ENSPCTG00005007980) #14	UMODL1 (ENSPCTG00005007872) #12	C2CD2 (ENSPCTG00005007843) #10	PRDM15 (ENSPCTG00005007461) #9	RIPK4 (ENSPCTG00005007402) #8
Blue whale	MODERN SPECIES	15	ENSBMSG00010005449	ENSBMSG00010005452	RIPK4 (ENSBMSG00010005460) #8	PRDM15 (ENSBMSG00010005502) #9	C2CD2 (ENSBMSG00010005605) #10	ZBTB21 (ENSBMSG00010005664) #11	UMODL1 (ENSBMSG00010005688) #12	ABCG1 (ENSBMSG00010005783) #13	TFF3 (ENSBMSG00010005816) #14	TFF2 (ENSBMSG00010005825) #16	TFF1 (ENSBMSG00010005833) #17	TMPRSS3 (ENSBMSG00010005853) #18	UBASH3A (ENSBMSG00010005886) #19	RSPH1 (ENSBMSG00010005950) #20	SLC37A1 (ENSBMSG00010005975) #21	PDE9A (ENSBMSG00010006135) #22	WDR4 (ENSBMSG00010006556) #24	ENSBMSG00010006574 #25	PKNOX1 (ENSBMSG00010006599) #26	ENSBMSG00010006616	CBS (ENSBMSG00010006633) #27	U2AF1 (ENSBMSG00010006667) #28	CRYAA (ENSBMSG00010006694) #29	SIK1 (ENSBMSG00010006706) #30	HSF2BP (ENSBMSG00010006728) #32	ENSBMSG00010006743	RRP1B (ENSBMSG00010006765) #33	ENSBMSG00010006807 #34	ENSBMSG00010006834 #35	RRP1 (ENSBMSG00010006842) #36	AGPAT3 (ENSBMSG00010006864) #37
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Carnivora	ANCESTRAL SPECIES	10	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Caniformia	ANCESTRAL SPECIES		ENSGT00940000161526.b	ENSGT00940000159908 #8	ENSGT00940000157890.c #9	ENSGT00940000157890.d #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Caniformia_b	ANCESTRAL SPECIES		ENSGT00940000163845	ENSGT00940000159908 #8	ENSGT00940000157890.c #9	ENSGT00940000157890.d #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Ursidae	ANCESTRAL SPECIES	1	ENSGT00940000163845.i	ENSGT00940000159908 #8	ENSGT00940000157890.c #9	ENSGT00940000157890.d #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841.d #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Ursus	ANCESTRAL SPECIES	94	ENSGT00940000163845.i	ENSGT00940000159908 #8	ENSGT00940000157890.c #9	ENSGT00940000157890.d #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841.d #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
American black bear	MODERN SPECIES	4084																ENSUAMG00000000812 #22	WDR4 (ENSUAMG00000000715) #24	NDUFV3 (ENSUAMG00000000707) #25
Polar bear	MODERN SPECIES	394	ENSUMAG00000025630	RIPK4 (ENSUMAG00000025629) #8	ENSUMAG00000025628 #9	ENSUMAG00000025627 #9	C2CD2 (ENSUMAG00000025626) #10	ZBTB21 (ENSUMAG00000025623) #11	UMODL1 (ENSUMAG00000025621) #12	ABCG1 (ENSUMAG00000025548) #13	TFF3 (ENSUMAG00000025547) #14	TFF2 (ENSUMAG00000025546) #16	TFF1 (ENSUMAG00000025545) #17	TMPRSS3 (ENSUMAG00000025544) #18	UBASH3A (ENSUMAG00000025543) #19	RSPH1 (ENSUMAG00000025542) #20	SLC37A1 (ENSUMAG00000025541) #21	PDE9A (ENSUMAG00000025540) #22	WDR4 (ENSUMAG00000025539) #24	NDUFV3 (ENSUMAG00000025538) #25	PKNOX1 (ENSUMAG00000025537) #26	CBS (ENSUMAG00000025527) #27	U2AF1 (ENSUMAG00000025525) #28	CRYAA (ENSUMAG00000025524) #29	SIK1 (ENSUMAG00000025514) #30	HSF2BP (ENSUMAG00000025511) #32	RRP1B (ENSUMAG00000025510) #33	PDXK (ENSUMAG00000025509) #34	RRP1 (ENSUMAG00000025507) #36	AGPAT3 (ENSUMAG00000025506) #37	TRAPPC10 (ENSUMAG00000025503)	PWP2 (ENSUMAG00000025481)	GATD3 (ENSUMAG00000025476)
Giant Panda	MODERN SPECIES		ENSAMEG00000031524	RIPK4 (ENSAMEG00000002205) #8	PRDM15 (ENSAMEG00000002162) #9	C2CD2 (ENSAMEG00000002123) #10	ZBTB21 (ENSAMEG00000028624) #11	UMODL1 (ENSAMEG00000002089) #12	ABCG1 (ENSAMEG00000002038) #13	TFF3 (ENSAMEG00000025151) #14	ENSAMEG00000025924 #16	ENSAMEG00000002024 #16	ENSAMEG00000002023 #17	TMPRSS3 (ENSAMEG00000001989) #18	UBASH3A (ENSAMEG00000001955) #19	ENSAMEG00000001940 #20	SLC37A1 (ENSAMEG00000001892) #21	PDE9A (ENSAMEG00000001848) #22	WDR4 (ENSAMEG00000001823) #24	NDUFV3 (ENSAMEG00000001819) #25	PKNOX1 (ENSAMEG00000001778) #26	ENSAMEG00000001765 #27	ENSAMEG00000000149 #30	HSF2BP (ENSAMEG00000011388) #32	RRP1B (ENSAMEG00000011401) #33	PDXK (ENSAMEG00000011430) #34	CSTB (ENSAMEG00000011447) #35	RRP1 (ENSAMEG00000011448) #36	ENSAMEG00000023579	AGPAT3 (ENSAMEG00000010987) #37	TRAPPC10 (ENSAMEG00000010970)	PWP2 (ENSAMEG00000010907)	GATD3 (ENSAMEG00000010894)
Mustelinae	ANCESTRAL SPECIES	67	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890.c #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
American mink	MODERN SPECIES	122	MX2 (ENSNVIG00000004991)	MX1 (ENSNVIG00000005239)	TMPRSS2 (ENSNVIG00000005330) #7	RIPK4 (ENSNVIG00000005386) #8	PRDM15 (ENSNVIG00000005389) #9	C2CD2 (ENSNVIG00000005456) #10	UMODL1 (ENSNVIG00000005508) #12	ABCG1 (ENSNVIG00000005652) #13	TFF3 (ENSNVIG00000005732) #14	TFF2 (ENSNVIG00000005743) #16	TFF1 (ENSNVIG00000005753) #17	TMPRSS3 (ENSNVIG00000005758) #18	UBASH3A (ENSNVIG00000005820) #19	RSPH1 (ENSNVIG00000005890) #20	SLC37A1 (ENSNVIG00000005945) #21	PDE9A (ENSNVIG00000006007) #22	WDR4 (ENSNVIG00000006026) #24	ENSNVIG00000006056 #25	PKNX1 (ENSNVIG00000006069) #26	CBS (ENSNVIG00000006101) #27	U2AF1 (ENSNVIG00000006310) #28	CRYAA (ENSNVIG00000006345) #29	SIK1 (ENSNVIG00000006387) #30	HSF2BP (ENSNVIG00000006866) #32	RRP1B (ENSNVIG00000006928) #33	PDXK (ENSNVIG00000006971) #34	CSTB (ENSNVIG00000007044) #35	RRP1 (ENSNVIG00000007054) #36	AGPAT3 (ENSNVIG00000007070) #37	TRAPPC10 (ENSNVIG00000007089)	PWP2 (ENSNVIG00000007096)
Ferret	MODERN SPECIES	248	ENSMPUG00000008922	RIPK4 (ENSMPUG00000008928) #8	PRDM15 (ENSMPUG00000008938) #9	C2CD2 (ENSMPUG00000008960) #10	ZBTB21 (ENSMPUG00000009040) #11	UMODL1 (ENSMPUG00000009050) #12	ENSMPUG00000009133	ABCG1 (ENSMPUG00000009157) #13	TFF3 (ENSMPUG00000009174) #14	TFF2 (ENSMPUG00000009192) #16	ENSMPUG00000009203 #17	TMPRSS3 (ENSMPUG00000009212) #18	UBASH3A (ENSMPUG00000009313) #19	RSPH1 (ENSMPUG00000009410) #20	SLC37A1 (ENSMPUG00000009419) #21	PDE9A (ENSMPUG00000009433) #22	WDR4 (ENSMPUG00000009605) #24	ENSMPUG00000009667 #25	PKNOX1 (ENSMPUG00000009673) #26	CBS (ENSMPUG00000009689) #27	U2AF1 (ENSMPUG00000009706) #28	CRYAA (ENSMPUG00000009713) #29	SIK1 (ENSMPUG00000009719) #30	ENSMPUG00000009768	HSF2BP (ENSMPUG00000009772) #32	RRP1B (ENSMPUG00000009810) #33	ENSMPUG00000019064	CSTB (ENSMPUG00000009819) #35	RRP1 (ENSMPUG00000009826) #36	ENSMPUG00000019065	AGPAT3 (ENSMPUG00000009918) #37
Canidae	ANCESTRAL SPECIES	39	ENSGT00940000161526.b	ENSGT00940000159908 #8	ENSGT00940000157890.c #9	ENSGT00940000157890.d #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Canis_lupus	ANCESTRAL SPECIES	38	ENSGT00940000161526.b	ENSGT00940000159908 #8	ENSGT00940000157890.c #9	ENSGT00940000157890.d #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00940000163122	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873
Dog	DUPLICATION
Dog	MODERN SPECIES	24	ENSCAFG00845030203	ENSCAFG00845030213	RIPK4 (ENSCAFG00845030222) #8	PRDM15 (ENSCAFG00845030258) #9	C2CD2 (ENSCAFG00845030326) #10	ZBTB21 (ENSCAFG00845030348) #11	UMODL1 (ENSCAFG00845030370) #12	ABCG1 (ENSCAFG00845030427) #13	TFF3 (ENSCAFG00845030487) #14	TFF2 (ENSCAFG00845030490) #16	TFF1 (ENSCAFG00845030496) #17	TMPRSS3 (ENSCAFG00845030504) #18	UBASH3A (ENSCAFG00845030552) #19	RSPH1 (ENSCAFG00845016424) #20	SLC37A1 (ENSCAFG00845016674) #21	ENSCAFG00845016845 #22	WDR4 (ENSCAFG00845016943) #24	ENSCAFG00845017044 #26	CBS (ENSCAFG00845017169) #27	U2AF1 (ENSCAFG00845017455) #28	CRYAA (ENSCAFG00845017570) #29	SIK1 (ENSCAFG00845017641) #30	HSF2BP (ENSCAFG00845017775) #32	ENSCAFG00845017980	RRP1B (ENSCAFG00845018066) #33	PDXK (ENSCAFG00845018299) #34	CSTB (ENSCAFG00845018589) #35	RRP1 (ENSCAFG00845018662) #36	AGPAT3 (ENSCAFG00845018820) #37	ENSCAFG00845018890	TRAPPC10 (ENSCAFG00845018939)
Dog	MODERN SPECIES	83																ENSCAFG00845024830 #22
Dingo	MODERN SPECIES	63	ENSCAFG00020016567	RIPK4 (ENSCAFG00020016569) #8	ENSCAFG00020016573 #9	ENSCAFG00020016578 #9	C2CD2 (ENSCAFG00020016591) #10	ENSCAFG00020016594 #11	UMODL1 (ENSCAFG00020016599) #12	ABCG1 (ENSCAFG00020016625) #13	TFF3 (ENSCAFG00020018411) #14	ENSCAFG00020018415 #16	TFF1 (ENSCAFG00020018416) #17	TMPRSS3 (ENSCAFG00020018424) #18	UBASH3A (ENSCAFG00020018464) #19	RSPH1 (ENSCAFG00020018487) #20	SLC37A1 (ENSCAFG00020018498) #21	PDE9A (ENSCAFG00020018526) #22	WDR4 (ENSCAFG00020018728) #24	NDUFV3 (ENSCAFG00020018747) #25	PKNOX1 (ENSCAFG00020018749) #26	ENSCAFG00020018761 #27	ENSCAFG00020018802 #27	U2AF1 (ENSCAFG00020018861) #28	CRYAA (ENSCAFG00020018863) #29	SIK1 (ENSCAFG00020018879) #30	HSF2BP (ENSCAFG00020018893) #32	ENSCAFG00020018896	RRP1B (ENSCAFG00020018901) #33	PDXK (ENSCAFG00020018948) #34	CSTB (ENSCAFG00020018974) #35	RRP1 (ENSCAFG00020018979) #36	AGPAT3 (ENSCAFG00020018995) #37
Red fox	MODERN SPECIES	181	ENSVVUG00000016503	ENSVVUG00000016507	RIPK4 (ENSVVUG00000016514) #8	PRDM15 (ENSVVUG00000016527) #9	C2CD2 (ENSVVUG00000016600) #10	ZBTB21 (ENSVVUG00000016612) #11	UMODL1 (ENSVVUG00000016621) #12	ABCG1 (ENSVVUG00000016638) #13	TFF3 (ENSVVUG00000016649) #14	TFF2 (ENSVVUG00000016652) #16	TFF1 (ENSVVUG00000016656) #17	TMPRSS3 (ENSVVUG00000016667) #18	UBASH3A (ENSVVUG00000016693) #19	RSPH1 (ENSVVUG00000016755) #20	SLC37A1 (ENSVVUG00000016766) #21	PDE9A (ENSVVUG00000016818) #22	WDR4 (ENSVVUG00000017084) #24	NDUFV3 (ENSVVUG00000017092) #25	PKNOX1 (ENSVVUG00000017115) #26	CBS (ENSVVUG00000017132) #27	U2AF1 (ENSVVUG00000017149) #28	CRYAA (ENSVVUG00000017219) #29	SIK1 (ENSVVUG00000017224) #30
Felidae	ANCESTRAL SPECIES	9	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Panthera	ANCESTRAL SPECIES	17	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Panthera_a	ANCESTRAL SPECIES	63			ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
leopard	MODERN SPECIES	148			RIPK4 (ENSPPRG00000007482) #8	PRDM15 (ENSPPRG00000007591) #9	C2CD2 (ENSPPRG00000007622) #10	ZBTB21 (ENSPPRG00000007645) #11	UMODL1 (ENSPPRG00000007753) #12	ABCG1 (ENSPPRG00000007893) #13	TFF3 (ENSPPRG00000007914) #14	TFF2 (ENSPPRG00000007919) #16	TFF1 (ENSPPRG00000007925) #17	TMPRSS3 (ENSPPRG00000008007) #18	UBASH3A (ENSPPRG00000008175) #19	RSPH1 (ENSPPRG00000008318) #20	SLC37A1 (ENSPPRG00000008368) #21	PDE9A (ENSPPRG00000008728) #22	WDR4 (ENSPPRG00000008824) #24	ENSPPRG00000008831 #25	PKNOX1 (ENSPPRG00000008876) #26	CBS (ENSPPRG00000009520) #27	U2AF1 (ENSPPRG00000009721) #28	CRYAA (ENSPPRG00000009838) #29	SIK1 (ENSPPRG00000010102) #30	HSF2BP (ENSPPRG00000010297) #32	RRP1B (ENSPPRG00000010356) #33	PDXK (ENSPPRG00000010569) #34	CSTB (ENSPPRG00000010619) #35	RRP1 (ENSPPRG00000010656) #36	AGPAT3 (ENSPPRG00000010943) #37	TRAPPC10 (ENSPPRG00000010959)	PWP2 (ENSPPRG00000011088)
lion	MODERN SPECIES	9	ENSPLOG00000013430	ENSPLOG00000013454	RIPK4 (ENSPLOG00000013487) #8	PRDM15 (ENSPLOG00000013728) #9	C2CD2 (ENSPLOG00000014058) #10	ZBTB21 (ENSPLOG00000014100) #11	UMODL1 (ENSPLOG00000014146) #12	ABCG1 (ENSPLOG00000014424) #13	ENSPLOG00000014592 #14	TFF2 (ENSPLOG00000014654) #16	ENSPLOG00000014767 #17	TMPRSS3 (ENSPLOG00000014832) #18	UBASH3A (ENSPLOG00000015421) #19	RSPH1 (ENSPLOG00000015521) #20	SLC37A1 (ENSPLOG00000015713) #21	PDE9A (ENSPLOG00000015820) #22	WDR4 (ENSPLOG00000016290) #24	ENSPLOG00000016396 #25	PKNOX1 (ENSPLOG00000016427) #26	CBS (ENSPLOG00000016524) #27	U2AF1 (ENSPLOG00000016633) #28	CRYAA (ENSPLOG00000016699) #29	SIK1 (ENSPLOG00000016729) #30	HSF2BP (ENSPLOG00000016853) #32	RRP1B (ENSPLOG00000016933) #33	PDXK (ENSPLOG00000017010) #34	CSTB (ENSPLOG00000017135) #35
Tiger	MODERN SPECIES	307							ENSPTIG00000010728 #12	ABCG1 (ENSPTIG00000010944) #13	TFF3 (ENSPTIG00000012548) #14	TFF2 (ENSPTIG00000012602) #16	TFF1 (ENSPTIG00000012738) #17	TMPRSS3 (ENSPTIG00000012992) #18	UBASH3A (ENSPTIG00000013976) #19	RSPH1 (ENSPTIG00000015837) #20	SLC37A1 (ENSPTIG00000016514) #21	PDE9A (ENSPTIG00000019234) #22	WDR4 (ENSPTIG00000006119) #24	ENSPTIG00000007257 #25	PKNOX1 (ENSPTIG00000007442) #26	CBS (ENSPTIG00000007912) #27	U2AF1 (ENSPTIG00000014259) #28	CRYAA (ENSPTIG00000015650) #29	ENSPTIG00000016449 #30	HSF2BP (ENSPTIG00000016528) #32	RRP1B (ENSPTIG00000016894) #33	PDXK (ENSPTIG00000018587) #34	CSTB (ENSPTIG00000019016) #35	RRP1 (ENSPTIG00000019473) #36	TRAPPC10 (ENSPTIG00000020068)	PWP2 (ENSPTIG00000020872)	GATD3 (ENSPTIG00000008371)
Cat	MODERN SPECIES	240	ENSFCAG00000044509	ENSFCAG00000039699	RIPK4 (ENSFCAG00000012694) #8	PRDM15 (ENSFCAG00000012695) #9	C2CD2 (ENSFCAG00000012696) #10	ZBTB21 (ENSFCAG00000036093) #11	UMODL1 (ENSFCAG00000012699) #12	ABCG1 (ENSFCAG00000012701) #13	TFF3 (ENSFCAG00000029722) #14	TFF2 (ENSFCAG00000012703) #16	TFF1 (ENSFCAG00000012704) #17	TMPRSS3 (ENSFCAG00000012705) #18	UBASH3A (ENSFCAG00000012706) #19	RSPH1 (ENSFCAG00000012707) #20	SLC37A1 (ENSFCAG00000012708) #21	PDE9A (ENSFCAG00000003965) #22	WDR4 (ENSFCAG00000003966) #24	NDUFV3 (ENSFCAG00000046775) #25	PKNOX1 (ENSFCAG00000042914) #26	CBS (ENSFCAG00000003969) #27	U2AF1 (ENSFCAG00000003970) #28	CRYAA (ENSFCAG00000000224) #29	SIK1 (ENSFCAG00000000225) #30	HSF2BP (ENSFCAG00000043141) #32	RRP1B (ENSFCAG00000010272) #33	PDXK (ENSFCAG00000008432) #34	ENSFCAG00000040822 #35	RRP1 (ENSFCAG00000008434) #36	AGPAT3 (ENSFCAG00000008438) #37	TRAPPC10 (ENSFCAG00000008440)	PWP2 (ENSFCAG00000004487)
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Equus	ANCESTRAL SPECIES	42	ENSGT00940000163258.b	ENSGT00940000161526.b.b.a.a.a	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.h #27	ENSGT00950000183152.B.c.a #28	ENSGT00510000047027.g #27	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.xb #35	ENSGT00940000154826.yb #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37
Donkey	MODERN SPECIES	9	ENSEASG00005032518	ENSEASG00005014723	ENSEASG00005024756 #8	PRDM15 (ENSEASG00005003891) #9	C2CD2 (ENSEASG00005003887) #10	ZBTB21 (ENSEASG00005030372) #11	UMODL1 (ENSEASG00005003854) #12	ABCG1 (ENSEASG00005003849) #13	ENSEASG00005025530 #14	TFF2 (ENSEASG00005003842) #16	TFF1 (ENSEASG00005003840) #17	TMPRSS3 (ENSEASG00005003829) #18	UBASH3A (ENSEASG00005003787) #19	RSPH1 (ENSEASG00005030089) #20	SLC37A1 (ENSEASG00005003775) #21	PDE9A (ENSEASG00005003769) #22	WDR4 (ENSEASG00005003766) #24	NDUFV3 (ENSEASG00005003763) #25	ENSEASG00005038023 #27	ENSEASG00005038681	PKNOX1 (ENSEASG00005003760) #26	ENSEASG00005001773 #28	ENSEASG00005034585 #27	ENSEASG00005037746 #29	SIK1 (ENSEASG00005001719) #30	HSF2BP (ENSEASG00005001700) #32	RRP1B (ENSEASG00005001687) #33	PDXK (ENSEASG00005001679) #34	ENSEASG00005030216 #35	ENSEASG00005032279 #35	RRP1 (ENSEASG00005001673) #36
Horse	MODERN SPECIES	18	ENSECAG00000007982	ENSECAG00000015072	RIPK4 (ENSECAG00000008330) #8	PRDM15 (ENSECAG00000017225) #9	C2CD2 (ENSECAG00000006419) #10	ZBTB21 (ENSECAG00000013046) #11	UMODL1 (ENSECAG00000013946) #12	ABCG1 (ENSECAG00000019065) #13	TFF3 (ENSECAG00000015204) #14	TFF2 (ENSECAG00000016409) #16	TFF1 (ENSECAG00000018260) #17	TMPRSS3 (ENSECAG00000000233) #18	UBASH3A (ENSECAG00000032819) #19	RSPH1 (ENSECAG00000010466) #20	SLC37A1 (ENSECAG00000015444) #21	PDE9A (ENSECAG00000017519) #22	WDR4 (ENSECAG00000019212) #24	NDUFV3 (ENSECAG00000003055) #25	PKNOX1 (ENSECAG00000010284) #26	ENSECAG00000046444	ENSECAG00000022794 #27	U2AF1 (ENSECAG00000015558) #28	ENSECAG00000021749 #27	SIK1 (ENSECAG00000006288) #30	HSF2BP (ENSECAG00000017282) #32	RRP1B (ENSECAG00000018018) #33	PDXK (ENSECAG00000022301) #34	ENSECAG00000034000 #35	ENSECAG00000032188 #35	RRP1 (ENSECAG00000015703) #36	AGPAT3 (ENSECAG00000022861) #37
Chiroptera	ANCESTRAL SPECIES	35	ENSGT00940000155207.a.b #7	ENSGT00940000163845	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Megabat	MODERN SPECIES	1673																PDE9A (ENSPVAG00000013219) #22
Microchiroptera	ANCESTRAL SPECIES	37	ENSGT00940000155207.a.b #7	ENSGT00940000163845	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Microbat	MODERN SPECIES	1453												ENSMLUG00000000126 #18	UBASH3A (ENSMLUG00000000130) #19	RSPH1 (ENSMLUG00000000135) #20	SLC37A1 (ENSMLUG00000000139) #21	PDE9A (ENSMLUG00000024657) #22	ENSMLUG00000023875	WDR4 (ENSMLUG00000004898) #24	NDUFV3 (ENSMLUG00000014816) #25	PKNOX1 (ENSMLUG00000014821) #26	CBS (ENSMLUG00000011885) #27	CRYAA (ENSMLUG00000022251) #29	ENSMLUG00000022683	ENSMLUG00000003131	ENSMLUG00000025468
Greater horseshoe bat	MODERN SPECIES	11	TMPRSS2 (ENSRFEG00010004092) #7	ENSRFEG00010004128	RIPK4 (ENSRFEG00010004153) #8	PRDM15 (ENSRFEG00010004214) #9	C2CD2 (ENSRFEG00010004326) #10	ZBTB21 (ENSRFEG00010004342) #11	UMODL1 (ENSRFEG00010004384) #12	ABCG1 (ENSRFEG00010004426) #13	TFF3 (ENSRFEG00010004472) #14	TFF2 (ENSRFEG00010004488) #16	TFF1 (ENSRFEG00010004500) #17	TMPRSS3 (ENSRFEG00010004521) #18	UBASH3A (ENSRFEG00010004562) #19	RSPH1 (ENSRFEG00010004627) #20	SLC37A1 (ENSRFEG00010004677) #21	PDE9A (ENSRFEG00010004823) #22	WDR4 (ENSRFEG00010004938) #24	NDUFV3 (ENSRFEG00010004952) #25	PKNOX1 (ENSRFEG00010000147) #26	CBS (ENSRFEG00010000170) #27	U2AF1 (ENSRFEG00010000191) #28	CRYAA (ENSRFEG00010000206) #29	SIK1 (ENSRFEG00010000222) #30	HSF2BP (ENSRFEG00010000255) #32	RRP1B (ENSRFEG00010000288) #33	PDXK (ENSRFEG00010000337) #34	CSTB (ENSRFEG00010000380) #35	RRP1 (ENSRFEG00010000411) #36	AGPAT3 (ENSRFEG00010000500) #37	TRAPPC10 (ENSRFEG00010000559)	PWP2 (ENSRFEG00010000602)
Atlantogenata	ANCESTRAL SPECIES	92	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.hb #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Xenarthra	ANCESTRAL SPECIES	444											ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28
Armadillo	MODERN SPECIES	944											TFF1 (ENSDNOG00000042323) #17	TMPRSS3 (ENSDNOG00000046072) #18	UBASH3A (ENSDNOG00000004477) #19	RSPH1 (ENSDNOG00000035119) #20	SLC37A1 (ENSDNOG00000018050) #21	PDE9A (ENSDNOG00000041056) #22	WDR4 (ENSDNOG00000041061) #24	NDUFV3 (ENSDNOG00000042984) #25	ENSDNOG00000039589	PKNOX1 (ENSDNOG00000008009) #26	CBS (ENSDNOG00000015383) #27	U2AF1 (ENSDNOG00000041686) #28
Sloth	MODERN SPECIES	4743																ENSCHOG00000004211 #22
Afrotheria	ANCESTRAL SPECIES	109	ENSGT00940000155686	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.hb #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Afrotheria_a	ANCESTRAL SPECIES	115		ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.hb #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Elephant	MODERN SPECIES	513	MX2 (ENSLAFG00000009018)	TMPRSS2 (ENSLAFG00000027954) #7	RIPK4 (ENSLAFG00000008863) #8	PRDM15 (ENSLAFG00000008866) #9	C2CD2 (ENSLAFG00000008880) #10	ZBTB21 (ENSLAFG00000003660) #11	UMODL1 (ENSLAFG00000007706) #12	ABCG1 (ENSLAFG00000009158) #13	TFF3 (ENSLAFG00000012686) #14	TFF2 (ENSLAFG00000021463) #16	ENSLAFG00000023145 #17	TMPRSS3 (ENSLAFG00000031726) #18	UBASH3A (ENSLAFG00000012601) #19	RSPH1 (ENSLAFG00000014466) #20	SLC37A1 (ENSLAFG00000005842) #21	PDE9A (ENSLAFG00000028539) #22	WDR4 (ENSLAFG00000021675) #24	NDUFV3 (ENSLAFG00000002098) #25	PKNOX1 (ENSLAFG00000011377) #26	CBS (ENSLAFG00000009950) #27	U2AF1 (ENSLAFG00000011460) #28	CRYAA (ENSLAFG00000017392) #29	ENSLAFG00000031722	SIK1 (ENSLAFG00000000960) #30	HSF2BP (ENSLAFG00000000763) #32	RRP1B (ENSLAFG00000000766) #33	PDXK (ENSLAFG00000010740) #34	CSTB (ENSLAFG00000002664) #35	RRP1 (ENSLAFG00000022901) #36	AGPAT3 (ENSLAFG00000018615) #37	TRAPPC10 (ENSLAFG00000003863)
Hyrax	MODERN SPECIES	4365																ENSPCAG00000003610 #22
Tenrec	MODERN SPECIES	5122																PDE9A (ENSETEG00000013256) #22
Marsupialia	ANCESTRAL SPECIES	23	ENSGT00940000160634	ENSGT00940000156271	ENSGT00940000162550	ENSGT00940000165160	ENSGT00860000134229	ENSGT00530000064274	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000162623 #17	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a.a #37	ENSGT00390000003873	ENSGT00530000063946.a
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00940000160634	ENSGT00940000156271	ENSGT00940000162550	ENSGT00940000165160	ENSGT00860000134229	ENSGT00530000064274	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT01070000254012	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a.a #37	ENSGT00500000044950	ENSGT00940000156253
Diprotodontia	ANCESTRAL SPECIES	32							ENSGT00530000064274	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826 #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a.a #37	ENSGT00500000044950	ENSGT00940000156253
Diprotodontia_a	ANCESTRAL SPECIES	31							ENSGT00530000064274	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027 #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159.a #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821.a #33	ENSGT00390000003874 #34	ENSGT00940000154826.bc #35	ENSGT00390000011821.b #36	ENSGT00950000182836.b.b.b.a.a #37	ENSGT00500000044950	ENSGT00940000156253
koala	MODERN SPECIES	249								KRTAP8-1 (ENSPCIG00000013717)	KRTAP7-1 (ENSPCIG00000013725)	ENSPCIG00000003816 #13	TFF3 (ENSPCIG00000003805) #14	ENSPCIG00000021135 #16	TMPRSS3 (ENSPCIG00000027525) #18	UBASH3A (ENSPCIG00000009254) #19	SLC37A1 (ENSPCIG00000003787) #21	PDE9A (ENSPCIG00000002353) #22	WDR4 (ENSPCIG00000002223) #24	ENSPCIG00000002205 #25	PKNOX1 (ENSPCIG00000007865) #26	CBS (ENSPCIG00000028095) #27	U2AF1 (ENSPCIG00000028098) #28	ENSPCIG00000028100 #29	ENSPCIG00000036347	SIK1 (ENSPCIG00000008860) #30	HSF2BP (ENSPCIG00000015503) #32	RRP1B (ENSPCIG00000015513) #33	PDXK (ENSPCIG00000015519) #34	ENSPCIG00000015522 #35	ENSPCIG00000015523 #36	ENSPCIG00000028254 #37	PSMG1 (ENSPCIG00000028255)
Common wonbat	MODERN SPECIES	1120						KRTAP19-2 (ENSVURG00010023347)	KRTAP8-1 (ENSVURG00010023341)	KRTAP7-1 (ENSVURG00010023340)	ENSVURG00010023339	ENSVURG00010023335 #13	TFF3 (ENSVURG00010023333) #14	ENSVURG00010023331	TMPRSS3 (ENSVURG00010023328) #18	UBASH3A (ENSVURG00010023324) #19	SLC37A1 (ENSVURG00010023314) #21	PDE9A (ENSVURG00010023297) #22	WDR4 (ENSVURG00010023283) #24	ENSVURG00010023279 #25	PKNOX1 (ENSVURG00010023276) #26	CBS (ENSVURG00010023271) #27	U2AF1 (ENSVURG00010023269) #28	ENSVURG00010023267 #29	SIK1 (ENSVURG00010023263) #30	ENSVURG00010023260	HSF2BP (ENSVURG00010023259) #32	RRP1B (ENSVURG00010023255) #33	ENSVURG00010023251	PDXK (ENSVURG00010023250) #34	ENSVURG00010023249 #35	ENSVURG00010023247 #36	ENSVURG00010023246 #37
Wallaby	MODERN SPECIES	6465																ENSMEUG00000016095 #22
Tasmanian devil	MODERN SPECIES	2	ATP5PF (ENSSHAG00000011069)	ENSSHAG00000011520	ENSSHAG00000012184	ENSSHAG00000012710	KRTAP19-5 (ENSSHAG00000020904)	KRTAP8-1 (ENSSHAG00000024898)	KRTAP7-1 (ENSSHAG00000029277)	ENSSHAG00000020787	ENSSHAG00000014199 #13	TFF3 (ENSSHAG00000029902) #14	TFF2 (ENSSHAG00000014806) #16	ENSSHAG00000027261	TMPRSS3 (ENSSHAG00000014966) #18	UBASH3A (ENSSHAG00000015152) #19	SLC37A1 (ENSSHAG00000015601) #21	PDE9A (ENSSHAG00000016254) #22	WDR4 (ENSSHAG00000016450) #24	ENSSHAG00000026320 #25	PKNOX1 (ENSSHAG00000016846) #26	CBS (ENSSHAG00000017100) #27	U2AF1 (ENSSHAG00000017185) #28	CRYAA (ENSSHAG00000017366) #29	SIK1 (ENSSHAG00000017494) #30	HSF2BP (ENSSHAG00000017635) #32	RRP1B (ENSSHAG00000017789) #33	PDXK (ENSSHAG00000017888) #34	CSTB (ENSSHAG00000025634) #35	ENSSHAG00000010304 #36	ENSSHAG00000008796 #37	ENSSHAG00000008206	ENSSHAG00000006972
Opossum	MODERN SPECIES	3	ENSMODG00000021010	ATP5PF (ENSMODG00000021011)	ENSMODG00000021013	CLDN17 (ENSMODG00000025379)	KRTAP19-8 (ENSMODG00000039189)	KRTAP19-2 (ENSMODG00000025376)	KRTAP8-1 (ENSMODG00000040866)	KRTAP7-1 (ENSMODG00000049297)	ENSMODG00000021016 #13	TFF3 (ENSMODG00000021017) #14	TFF2 (ENSMODG00000021018) #16	ENSMODG00000021019 #17	TMPRSS3 (ENSMODG00000021020) #18	UBASH3A (ENSMODG00000021021) #19	ENSMODG00000021023 #21	PDE9A (ENSMODG00000025366) #22	WDR4 (ENSMODG00000021024) #24	ENSMODG00000021025 #25	PKNOX1 (ENSMODG00000021026) #26	CBS (ENSMODG00000021028) #27	U2AF1 (ENSMODG00000029158) #28	CRYAA (ENSMODG00000021030) #29	SIK1 (ENSMODG00000021031) #30	HSF2BP (ENSMODG00000021032) #32	RRP1B (ENSMODG00000021033) #33	ENSMODG00000037340 #34	PDXK (ENSMODG00000021034) #34	CSTB (ENSMODG00000021035) #35	ENSMODG00000051346 #36	AGPAT3 (ENSMODG00000021037) #37	TRAPPC10 (ENSMODG00000021039)
Platypus	MODERN SPECIES	9	ENSOANG00000006433	ENSOANG00000006437	TMPRSS2 (ENSOANG00000006438) #7	RIPK4 (ENSOANG00000006443) #8	ENSOANG00000006444	PRDM15 (ENSOANG00000006445) #9	ENSOANG00000006446 #10	ZBTB21 (ENSOANG00000019605) #11	ABCG1 (ENSOANG00000006449) #13	ENSOANG00000006450 #14	ENSOANG00000037039	TMPRSS3 (ENSOANG00000006451) #18	UBASH3A (ENSOANG00000006452) #19	RSPH1 (ENSOANG00000006454) #20	SLC37A1 (ENSOANG00000006455) #21	PDE9A (ENSOANG00000006458) #22	WDR4 (ENSOANG00000006459) #24	ENSOANG00000006460 #25	PKNOX1 (ENSOANG00000006461) #26	CBS (ENSOANG00000006462) #27	U2AF1 (ENSOANG00000006463) #28	CRYAA (ENSOANG00000006464) #29	SIK1 (ENSOANG00000006466) #30	HSF2BP (ENSOANG00000006469) #32	RRP1B (ENSOANG00000006470) #33	PDXK (ENSOANG00000006471) #34	ENSOANG00000041552 #36	AGPAT3 (ENSOANG00000006473) #37	ENSOANG00000042993	ENSOANG00000045507	PWP2 (ENSOANG00000006477)
Sauria	ANCESTRAL SPECIES	2	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT01070000254012	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Lepidosauria	ANCESTRAL SPECIES	4	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000161334.g #16	ENSGT01070000254012	ENSGT01070000254068	ENSGT00940000161334.h #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000164201	ENSGT00940000155686.d	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT01070000254068	ENSGT00940000161334.h #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Laterata	ANCESTRAL SPECIES		ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT01070000254068	ENSGT00940000161334.h #16	ENSGT00980000201888	ENSGT00940000161334.g #16	ENSGT01070000254012	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174.h #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Common wall lizard	MODERN SPECIES	12	ENSPMRG00000021866 #8	ENSPMRG00000021882 #8	PRDM15 (ENSPMRG00000021892) #9	C2CD2 (ENSPMRG00000021944) #10	ZBTB21 (ENSPMRG00000021961) #11	UMODL1 (ENSPMRG00000021978) #12	ABCG1 (ENSPMRG00000022041) #13	ENSPMRG00000022054	TFF2 (ENSPMRG00000022069) #16	ENSPMRG00000022075	ENSPMRG00000022081	TMPRSS3 (ENSPMRG00000022090) #18	UBASH3A (ENSPMRG00000022100) #19	RSPH1 (ENSPMRG00000022107) #20	SLC37A1 (ENSPMRG00000022118) #21	PDE9A (ENSPMRG00000022131) #22	ENSPMRG00000022158 #24	ENSPMRG00000022203 #25	PKNOX1 (ENSPMRG00000022216) #26	ENSPMRG00000022227 #27	CBS (ENSPMRG00000022240) #27	U2AF1 (ENSPMRG00000022258) #28	CRYAA (ENSPMRG00000022271) #29	SIK1 (ENSPMRG00000022275) #30	ENSPMRG00000022282	HSF2BP (ENSPMRG00000022285) #32	ENSPMRG00000022293 #33	PDXK (ENSPMRG00000022302) #34	ENSPMRG00000022309	AGPAT3 (ENSPMRG00000022311) #37	TRAPPC10 (ENSPMRG00000022319)
Argentine black and white tegu	MODERN SPECIES		ENSSMRG00000022935	RIPK4 (ENSSMRG00000022933) #8	PRDM15 (ENSSMRG00000022932) #9	C2CD2 (ENSSMRG00000022931) #10	ZBTB21 (ENSSMRG00000022929) #11	UMODL1 (ENSSMRG00000022928) #12	ABCG1 (ENSSMRG00000022927) #13	ENSSMRG00000022926	ENSSMRG00000022925	ENSSMRG00000022924 #16	ENSSMRG00000022923	TMPRSS3 (ENSSMRG00000022922) #18	UBASH3A (ENSSMRG00000022921) #19	RSPH1 (ENSSMRG00000022920) #20	SLC37A1 (ENSSMRG00000022919) #21	PDE9A (ENSSMRG00000022917) #22	ENSSMRG00000022916 #25	WDR4 (ENSSMRG00000022915) #24	PKNOX1 (ENSSMRG00000022914) #26	ENSSMRG00000022913 #27	CBS (ENSSMRG00000022912) #27	U2AF1 (ENSSMRG00000022911) #28	CRYAA (ENSSMRG00000022910) #29	SIK1 (ENSSMRG00000022909) #30	HSF2BP (ENSSMRG00000022908) #32	ENSSMRG00000022907 #33	PDXK (ENSSMRG00000022905) #34	AGPAT3 (ENSSMRG00000022903) #37	TRAPPC10 (ENSSMRG00000022902)	PWP2 (ENSSMRG00000022901)	GATD3 (ENSSMRG00000022900)
Toxicofera	ANCESTRAL SPECIES	9	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT01070000254068	ENSGT00940000161334.h #16	ENSGT00940000161334.g #16	ENSGT01070000254012	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Elapidae	ANCESTRAL SPECIES	10	ENSGT00940000155686.c.a	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT01070000254068	ENSGT00940000161334.h #16	ENSGT00940000161334.g #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00940000154420.B.e.a	ENSGT00390000003873	ENSGT00550000074981
Indian cobra	MODERN SPECIES	4	TMPRSS2 (ENSNNAG00000014479) #7	RIPK4 (ENSNNAG00000014451) #8	PRDM15 (ENSNNAG00000014280) #9	C2CD2 (ENSNNAG00000014209) #10	ZBTB21 (ENSNNAG00000014183) #11	ENSNNAG00000014168	ENSNNAG00000014142 #12	ABCG1 (ENSNNAG00000014043) #13	ENSNNAG00000014021	ENSNNAG00000014012	ENSNNAG00000014007	ENSNNAG00000013990 #16	TMPRSS3 (ENSNNAG00000013964) #18	UBASH3A (ENSNNAG00000013860) #19	SLC37A1 (ENSNNAG00000013807) #21	PDE9A (ENSNNAG00000013241) #22	WDR4 (ENSNNAG00000013106) #24	ENSNNAG00000013081	ENSNNAG00000013069 #26	ENSNNAG00000013036 #26	ENSNNAG00000012987 #27	CBS (ENSNNAG00000011947) #27	U2AF1 (ENSNNAG00000011782) #28	CRYAA (ENSNNAG00000011756) #29	SIK1 (ENSNNAG00000011611) #30	HSF2BP (ENSNNAG00000011433) #32	ENSNNAG00000011390 #33	PDXK (ENSNNAG00000011216) #34	AGPAT3 (ENSNNAG00000011161) #37	ENSNNAG00000011145	TRAPPC10 (ENSNNAG00000011031)
Elapidae_a	ANCESTRAL SPECIES	64	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890.i #9	ENSGT00940000157890.j #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT01070000254068	ENSGT00940000161334.h #16	ENSGT00940000161334.g #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00940000154420.B.e.a	ENSGT00390000003873	ENSGT00550000074981
Acanthophiinae	ANCESTRAL SPECIES	58	ENSGT00940000159908 #8	ENSGT00940000157890.i #9	ENSGT00940000157890.j #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT01070000254068	ENSGT00940000161334.h #16	ENSGT00980000201888	ENSGT00990000211936	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00940000154420.B.e.a	ENSGT00390000003873	ENSGT00550000074981
Eastern brown snake	MODERN SPECIES	62	BACE2 (ENSPTXG00000010234)	FAM3B (ENSPTXG00000010236)	MX1 (ENSPTXG00000010245)	TMPRSS2 (ENSPTXG00000010484) #7	RIPK4 (ENSPTXG00000010486) #8	PRDM15 (ENSPTXG00000010491) #9	ZBTB21 (ENSPTXG00000010495) #11	UMODL1 (ENSPTXG00000010496) #12	ABCG1 (ENSPTXG00000010497) #13	ENSPTXG00000010499 #16	ENSPTXG00000010500 #16	ENSPTXG00000010501	TMPRSS3 (ENSPTXG00000010502) #18	UBASH3A (ENSPTXG00000010504) #19	SLC37A1 (ENSPTXG00000010543) #21	PDE9A (ENSPTXG00000010544) #22	ENSPTXG00000010545 #25	PKNOX1 (ENSPTXG00000010546) #26	ENSPTXG00000010547 #27	CBS (ENSPTXG00000010597) #27	U2AF1 (ENSPTXG00000010599) #28	CRYAA (ENSPTXG00000010601) #29	SIK1 (ENSPTXG00000010603) #30	HSF2BP (ENSPTXG00000010604) #32	ENSPTXG00000010608 #33	PDXK (ENSPTXG00000010611) #34	AGPAT3 (ENSPTXG00000010613) #37	ENSPTXG00000010616	TRAPPC10 (ENSPTXG00000010618)	ENSPTXG00000010622	PWP2 (ENSPTXG00000010624)
Mainland tiger snake	MODERN SPECIES	58	RIPK4 (ENSNSUG00000007293) #8	ENSNSUG00000007308 #9	ENSNSUG00000007312 #9	C2CD2 (ENSNSUG00000007317) #10	ZBTB21 (ENSNSUG00000007320) #11	ENSNSUG00000007322 #12	ABCG1 (ENSNSUG00000007324) #13	ENSNSUG00000007327	TFF2 (ENSNSUG00000007328) #16	ENSNSUG00000007329	ENSNSUG00000007331	TMPRSS3 (ENSNSUG00000007332) #18	UBASH3A (ENSNSUG00000007336) #19	RSPH1 (ENSNSUG00000007352) #20	SLC37A1 (ENSNSUG00000007353) #21	PDE9A (ENSNSUG00000007354) #22	WDR4 (ENSNSUG00000007453) #24	ENSNSUG00000007457 #25	PKNOX1 (ENSNSUG00000007458) #26	ENSNSUG00000007464 #27	CBS (ENSNSUG00000007469) #27	U2AF1 (ENSNSUG00000007472) #28	CRYAA (ENSNSUG00000007474) #29	SIK1 (ENSNSUG00000007481) #30	HSF2BP (ENSNSUG00000007482) #32	ENSNSUG00000007484 #33	PDXK (ENSNSUG00000007485) #34	AGPAT3 (ENSNSUG00000007488) #37	ENSNSUG00000007510	TRAPPC10 (ENSNSUG00000007511)	PWP2 (ENSNSUG00000007518)
Blue-lipped sea krait	MODERN SPECIES	1040																PDE9A (ENSLLTG00000005409) #22
Lizard	MODERN SPECIES	2	ENSACAG00000005374 #9	C2CD2 (ENSACAG00000003189) #10	ZBTB21 (ENSACAG00000003185) #11	UMODL1 (ENSACAG00000003165) #12	ENSACAG00000038608	ABCG1 (ENSACAG00000003056) #13	ENSACAG00000027433	ENSACAG00000003033 #16	ENSACAG00000042608 #16	ENSACAG00000044509	TMPRSS3 (ENSACAG00000003022) #18	UBASH3A (ENSACAG00000003008) #19	RSPH1 (ENSACAG00000002948) #20	ENSACAG00000044666	SLC37A1 (ENSACAG00000002938) #21	PDE9A (ENSACAG00000002778) #22	WDR4 (ENSACAG00000002741) #24	ENSACAG00000040081	PKNOX1 (ENSACAG00000002626) #26	ENSACAG00000002605 #27	CBS (ENSACAG00000017832) #27	u2af1 (ENSACAG00000037602) #28	CRYAA (ENSACAG00000017837) #29	ENSACAG00000045425	SIK1 (ENSACAG00000017841) #30	HSF2BP (ENSACAG00000017849) #32	ENSACAG00000017851 #33	PDXK (ENSACAG00000017853) #34	AGPAT3 (ENSACAG00000017856) #37	ENSACAG00000044735	ENSACAG00000034895
tuatara	MODERN SPECIES	223	ENSSPUG00000013146	TMPRSS2 (ENSSPUG00000013196) #7	RIPK4 (ENSSPUG00000013338) #8	PRDM15 (ENSSPUG00000013355) #9	C2CD2 (ENSSPUG00000013392) #10	ZBTB21 (ENSSPUG00000013401) #11	ENSSPUG00000013408 #12	ENSSPUG00000013418	ENSSPUG00000013427 #16	ENSSPUG00000013442 #16	ENSSPUG00000013446	TMPRSS3 (ENSSPUG00000013451) #18	UBASH3A (ENSSPUG00000013461) #19	RSPH1 (ENSSPUG00000013475) #20	SLC37A1 (ENSSPUG00000013491) #21	PDE9A (ENSSPUG00000013548) #22
Archelosauria	ANCESTRAL SPECIES		ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00730000113741	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334 #16	ENSGT01070000254012	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Archosauria	ANCESTRAL SPECIES	2	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00730000113741	ENSGT00940000160131 #13	ENSGT00940000161334 #16	ENSGT01070000254012	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Aves	ANCESTRAL SPECIES		ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00730000113741	ENSGT00940000160131 #13	ENSGT00940000161334 #16	ENSGT01070000254012	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Neognathae	ANCESTRAL SPECIES	1	ENSGT00940000155686.d	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00730000113741	ENSGT00940000160131 #13	ENSGT00940000161334 #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00940000155686.d	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00730000113741	ENSGT00940000160131 #13	ENSGT00940000161334 #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Anatidae	ANCESTRAL SPECIES	6	ENSGT00940000163266	ENSGT00940000155686.d	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000161334 #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Pink-footed goose	MODERN SPECIES	12										ABCG1 (ENSABRG00000015096) #13	TFF2 (ENSABRG00000015091) #16	TMPRSS3 (ENSABRG00000015084) #18	UBASH3A (ENSABRG00000015080) #19	RSPH1 (ENSABRG00000015073) #20	SLC37A1 (ENSABRG00000015063) #21	PDE9A (ENSABRG00000015054) #22	WDR4 (ENSABRG00000015048) #24	ENSABRG00000015047 #25	PKNOX1 (ENSABRG00000015044) #26	ENSABRG00000015041 #27	CBS (ENSABRG00000015037) #27	U2AF1 (ENSABRG00000015022) #28	CRYAA (ENSABRG00000015013) #29	SIK1 (ENSABRG00000015006) #30	HSF2BP (ENSABRG00000015002) #32	ENSABRG00000014992 #33	PDXK (ENSABRG00000014987) #34	AGPAT3 (ENSABRG00000014898) #37	TRAPPC10 (ENSABRG00000014839)	PWP2 (ENSABRG00000014711)	GATD3 (ENSABRG00000014692)
Duck	MODERN SPECIES		FAM3B (ENSAPLG00000015920)	MX1 (ENSAPLG00000015976)	TMPRSS2 (ENSAPLG00000016160) #7	RIPK4 (ENSAPLG00000016253) #8	ENSAPLG00000001186	PRDM15 (ENSAPLG00000001239) #9	C2CD2 (ENSAPLG00000001983) #10	ZBTB21 (ENSAPLG00000000767) #11	ENSAPLG00000002409 #12	ABCG1 (ENSAPLG00000008841) #13	TFF2 (ENSAPLG00000020197) #16	TMPRSS3 (ENSAPLG00000008634) #18	UBASH3A (ENSAPLG00000008138) #19	RSPH1 (ENSAPLG00000007969) #20	SLC37A1 (ENSAPLG00000007435) #21	PDE9A (ENSAPLG00000007348) #22	WDR4 (ENSAPLG00000007171) #24	ENSAPLG00000001508 #25	PKNOX1 (ENSAPLG00000009259) #26	ENSAPLG00000029470 #27	CBS (ENSAPLG00000009685) #27	U2AF1 (ENSAPLG00000030109) #28	CRYAA (ENSAPLG00000017972) #29	SIK1 (ENSAPLG00000004813) #30	HSF2BP (ENSAPLG00000004231) #32	ENSAPLG00000004310 #33	PDXK (ENSAPLG00000004480) #34	AGPAT3 (ENSAPLG00000009814) #37	TRAPPC10 (ENSAPLG00000010086)	PWP2 (ENSAPLG00000010371)	GATD3 (ENSAPLG00000018842)
Phasianidae	ANCESTRAL SPECIES		ENSGT00950000183004.a.b.a.b	ENSGT00940000163266	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00730000113741	ENSGT00940000160131 #13	ENSGT00940000161334 #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873.q	ENSGT00550000074981	ENSGT00390000003706.a.a
Japanese quail	MODERN SPECIES		BACE2 (ENSCJPG00005008649)	FAM3B (ENSCJPG00005008650)	MX2 (ENSCJPG00005008653)	TMPRSS2 (ENSCJPG00005008655) #7	RIPK4 (ENSCJPG00005008656) #8	PRDM15 (ENSCJPG00005008658) #9	C2CD2 (ENSCJPG00005008685) #10	ZBTB21 (ENSCJPG00005008686) #11	UMODL1 (ENSCJPG00005008688) #12	ABCG1 (ENSCJPG00005008689) #13	TFF2 (ENSCJPG00005008691) #16	TMPRSS3 (ENSCJPG00005008707) #18	UBASH3A (ENSCJPG00005008708) #19	RSPH1 (ENSCJPG00005008709) #20	SLC37A1 (ENSCJPG00005008710) #21	PDE9A (ENSCJPG00005008711) #22	WDR4 (ENSCJPG00005008712) #24	ENSCJPG00005008713 #25	PKNOX1 (ENSCJPG00005008714) #26	ENSCJPG00005008715 #27	CBS (ENSCJPG00005008721) #27	U2AF1 (ENSCJPG00005008722) #28	CRYAA (ENSCJPG00005008723) #29	SIK1 (ENSCJPG00005008725) #30	HSF2BP (ENSCJPG00005008756) #32	ENSCJPG00005008758 #33	PDXK (ENSCJPG00005008759) #34	AGPAT3 (ENSCJPG00005008761) #37	TRAPPC10 (ENSCJPG00005008778)	PWP2 (ENSCJPG00005008782)	ICOSLG (ENSCJPG00005008975)
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00950000183004.a.b.a.b	ENSGT00940000164201	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00730000113741	ENSGT00940000160131 #13	ENSGT00940000161334 #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873.q	ENSGT00550000074981	ENSGT00390000003706.a.a
Turkey	MODERN SPECIES		ENSMGAG00000014597	ENSMGAG00000017291	ENSMGAG00000014596	ENSMGAG00000014594	ENSMGAG00000019240	ENSMGAG00000014593 #37	ENSMGAG00000014592 #34	ENSMGAG00000014591 #33	ENSMGAG00000014590 #32	ENSMGAG00000014589 #30	ENSMGAG00000017966 #29	ENSMGAG00000014587 #28	ENSMGAG00000014586 #27	ENSMGAG00000014582 #26	ENSMGAG00000014581 #25	ENSMGAG00000014577 #22	ENSMGAG00000014580 #24	SLC37A1 (ENSMGAG00000014579) #21	TFF2 (ENSMGAG00000014574) #16	ENSMGAG00000014575 #18	UBASH3A (ENSMGAG00000014576) #19	RSPH1 (ENSMGAG00000014578) #20	ENSMGAG00000014573 #13	ENSMGAG00000014607	GPR82 (ENSMGAG00000020904)	GPR34 (ENSMGAG00000019677)	NYX (ENSMGAG00000015465)	ENSMGAG00000014609	ENSMGAG00000014610	ENSMGAG00000014611	MED14 (ENSMGAG00000014613)
Chicken	MODERN SPECIES		ENSGALG00010013778	MX1 (ENSGALG00010013809)	TMPRSS2 (ENSGALG00010013833) #7	RIPK4 (ENSGALG00010010941) #8	PRDM15 (ENSGALG00010010948) #9	C2CD2 (ENSGALG00010010991) #10	ZBTB21 (ENSGALG00010010982) #11	UMODL1 (ENSGALG00010011004) #12	ENSGALG00010011074	ABCG1 (ENSGALG00010011104) #13	TFF3 (ENSGALG00010011115) #16	TMPRSS3 (ENSGALG00010011125) #18	UBASH3A (ENSGALG00010011139) #19	RSPH1 (ENSGALG00010011185) #20	SLC37A1 (ENSGALG00010011211) #21	PDE9A (ENSGALG00010011244) #22	WDR4 (ENSGALG00010011275) #24	NDUFV3 (ENSGALG00010011293) #25	PKNOX1 (ENSGALG00010011340) #26	ENSGALG00010011814 #27	CBS (ENSGALG00010011839) #27	U2AF1 (ENSGALG00010011880) #28	CRYAA (ENSGALG00010011889) #29	SIK1 (ENSGALG00010011896) #30	HSF2BP (ENSGALG00010011917) #32	RRP1B (ENSGALG00010011925) #33	PDXK (ENSGALG00010011950) #34	AGPAT3 (ENSGALG00010011961) #37	TRAPPC10 (ENSGALG00010011973)	PWP2 (ENSGALG00010014726)	GATD3A (ENSGALG00010011977)
Neognathae_b	ANCESTRAL SPECIES		ENSGT00940000155686.d	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00730000113741	ENSGT00940000160131 #13	ENSGT00940000161334 #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686.d	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00730000113741	ENSGT00940000160131 #13	ENSGT00940000161334 #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Great tit	MODERN SPECIES		DSCAM (ENSPMJG00000010433)	BACE2 (ENSPMJG00000010499)	MX1 (ENSPMJG00000010501)	TMPRSS2 (ENSPMJG00000010504) #7	RIPK4 (ENSPMJG00000010510) #8	PRDM15 (ENSPMJG00000010516) #9	C2CD2 (ENSPMJG00000010580) #10	ZBTB21 (ENSPMJG00000010582) #11	ENSPMJG00000010583 #12	ABCG1 (ENSPMJG00000010585) #13	TFF2 (ENSPMJG00000010586) #16	TMPRSS3 (ENSPMJG00000010627) #18	UBASH3A (ENSPMJG00000010628) #19	RSPH1 (ENSPMJG00000010629) #20	SLC37A1 (ENSPMJG00000010630) #21	PDE9A (ENSPMJG00000010631) #22	WDR4 (ENSPMJG00000010640) #24	ENSPMJG00000010687 #25	PKNOX1 (ENSPMJG00000010709) #26	ENSPMJG00000010711 #27	CBS (ENSPMJG00000010712) #27	ENSPMJG00000010715	U2AF1 (ENSPMJG00000010719) #28	CRYAA (ENSPMJG00000010726) #29	SIK1 (ENSPMJG00000010767) #30	HSF2BP (ENSPMJG00000010768) #32	ENSPMJG00000010769 #33	PDXK (ENSPMJG00000010770) #34	AGPAT3 (ENSPMJG00000010793) #37	TRAPPC10 (ENSPMJG00000010794)	PWP2 (ENSPMJG00000010796)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686.d	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00730000113741	ENSGT00940000160131 #13	ENSGT00940000161334 #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Flycatcher	MODERN SPECIES		FAM3B (ENSFALG00000002111)	MX1 (ENSFALG00000002094)	TMPRSS2 (ENSFALG00000002079) #7	RIPK4 (ENSFALG00000002070) #8	PRDM15 (ENSFALG00000002064) #9	ENSFALG00000002057	ZBTB21 (ENSFALG00000002056) #11	ENSFALG00000028853 #12	ENSFALG00000028291	ABCG1 (ENSFALG00000002052) #13	TFF2 (ENSFALG00000002051) #16	TMPRSS3 (ENSFALG00000002042) #18	UBASH3A (ENSFALG00000002028) #19	RSPH1 (ENSFALG00000002230) #20	SLC37A1 (ENSFALG00000001964) #21	PDE9A (ENSFALG00000001967) #22	WDR4 (ENSFALG00000027087) #24	ENSFALG00000001974 #25	PKNOX1 (ENSFALG00000001975) #26	CBS (ENSFALG00000001994) #27	U2AF1 (ENSFALG00000027776) #28	CRYAA (ENSFALG00000002001) #29	SIK1 (ENSFALG00000002012) #30	HSF2BP (ENSFALG00000002019) #32	ENSFALG00000002024 #33	PDXK (ENSFALG00000012249) #34	AGPAT3 (ENSFALG00000012275) #37	ENSFALG00000025043	TRAPPC10 (ENSFALG00000012289)	PWP2 (ENSFALG00000012300)	GATD3 (ENSFALG00000012311)
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686.d	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000161334 #16	ENSGT00940000158589.c #18	ENSGT00940000158589.d #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Medium ground finch	MODERN SPECIES	141	FAM3B (ENSGFOG00000014554)	MX1 (ENSGFOG00000014552)	TMPRSS2 (ENSGFOG00000014548) #7	RIPK4 (ENSGFOG00000014546) #8	PRDM15 (ENSGFOG00000014544) #9	C2CD2 (ENSGFOG00000014541) #10	ZBTB21 (ENSGFOG00000014540) #11	ENSGFOG00000014538 #12	ABCG1 (ENSGFOG00000014537) #13	TFF2 (ENSGFOG00000014536) #16	ENSGFOG00000014535 #18	ENSGFOG00000014534 #18	UBASH3A (ENSGFOG00000014531) #19	RSPH1 (ENSGFOG00000014528) #20	SLC37A1 (ENSGFOG00000014521) #21	PDE9A (ENSGFOG00000014513) #22	WDR4 (ENSGFOG00000014511) #24	ENSGFOG00000014508 #25	PKNOX1 (ENSGFOG00000014506) #26	ENSGFOG00000014502 #27	CBS (ENSGFOG00000014500) #27	U2AF1 (ENSGFOG00000014496) #28	ENSGFOG00000014492	CRYAA (ENSGFOG00000014491) #29	SIK1 (ENSGFOG00000014484) #30	HSF2BP (ENSGFOG00000014482) #32	ENSGFOG00000014480 #33	PDXK (ENSGFOG00000014477) #34	AGPAT3 (ENSGFOG00000014473) #37	TRAPPC10 (ENSGFOG00000014464)	PWP2 (ENSGFOG00000014422)
Passeroidea	ANCESTRAL SPECIES	10	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686.d	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000161334 #16	ENSGT00940000158589.c #18	ENSGT00940000158589.d #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Zebra finch	MODERN SPECIES		BACE2 (ENSTGUG00000005268)	FAM3B (ENSTGUG00000005255)	MX1 (ENSTGUG00000005326)	TMPRSS2 (ENSTGUG00000005348) #7	RIPK4 (ENSTGUG00000005420) #8	PRDM15 (ENSTGUG00000005437) #9	C2CD2 (ENSTGUG00000005496) #10	ZBTB21 (ENSTGUG00000005526) #11	UMODL1 (ENSTGUG00000005528) #12	ABCG1 (ENSTGUG00000005541) #13	TFF2 (ENSTGUG00000005579) #16	TMPRSS3 (ENSTGUG00000005582) #18	UBASH3A (ENSTGUG00000005618) #19	RSPH1 (ENSTGUG00000005646) #20	SLC37A1 (ENSTGUG00000005671) #21	PDE9A (ENSTGUG00000005695) #22	WDR4 (ENSTGUG00000005733) #24	ENSTGUG00000005743 #25	PKNOX1 (ENSTGUG00000005745) #26	ENSTGUG00000005778 #27	CBS (ENSTGUG00000005790) #27	U2AF1 (ENSTGUG00000028798) #28	CRYAA (ENSTGUG00000024562) #29	SIK1 (ENSTGUG00000005884) #30	HSF2BP (ENSTGUG00000005915) #32	ENSTGUG00000005926 #33	PDXK (ENSTGUG00000021550) #34	AGPAT3 (ENSTGUG00000005961) #37	TRAPPC10 (ENSTGUG00000005983)	PWP2 (ENSTGUG00000005996)	GATD3 (ENSTGUG00000006045)
Common canary	MODERN SPECIES	11	BACE2 (ENSSCAG00000010911)	FAM3B (ENSSCAG00000010915)	MX1 (ENSSCAG00000010924)	TMPRSS2 (ENSSCAG00000010931) #7	RIPK4 (ENSSCAG00000010937) #8	PRDM15 (ENSSCAG00000010947) #9	C2CD2 (ENSSCAG00000010957) #10	ZBTB21 (ENSSCAG00000010963) #11	ENSSCAG00000010967 #12	ABCG1 (ENSSCAG00000010972) #13	TFF2 (ENSSCAG00000010978) #16	TMPRSS3 (ENSSCAG00000010983) #18	UBASH3A (ENSSCAG00000010991) #19	RSPH1 (ENSSCAG00000011006) #20	SLC37A1 (ENSSCAG00000011016) #21	PDE9A (ENSSCAG00000011039) #22	WDR4 (ENSSCAG00000011104) #24	ENSSCAG00000011106 #25	PKNOX1 (ENSSCAG00000011110) #26	ENSSCAG00000011125 #27	CBS (ENSSCAG00000011177) #27	U2AF1 (ENSSCAG00000011188) #28	CRYAA (ENSSCAG00000011193) #29	SIK1 (ENSSCAG00000011195) #30	HSF2BP (ENSSCAG00000011206) #32	ENSSCAG00000011213 #33	PDXK (ENSSCAG00000011227) #34	AGPAT3 (ENSSCAG00000011265) #37	TRAPPC10 (ENSSCAG00000011280)	PWP2 (ENSSCAG00000011297)	GATD3 (ENSSCAG00000011312)
Neognathae_c	ANCESTRAL SPECIES	4	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686.d	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000161334 #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Kakapo	MODERN SPECIES	11	FAM3B (ENSSHBG00005019204)	MX1 (ENSSHBG00005019205)	TMPRSS2 (ENSSHBG00005019207) #7	RIPK4 (ENSSHBG00005019208) #8	ENSSHBG00005019212	PRDM15 (ENSSHBG00005019220) #9	C2CD2 (ENSSHBG00005019235) #10	ZBTB21 (ENSSHBG00005019241) #11	ENSSHBG00005019243 #12	ABCG1 (ENSSHBG00005019254) #13	TFF2 (ENSSHBG00005019267) #16	TMPRSS3 (ENSSHBG00005019269) #18	UBASH3A (ENSSHBG00005019270) #19	RSPH1 (ENSSHBG00005019277) #20	SLC37A1 (ENSSHBG00005019286) #21	PDE9A (ENSSHBG00005019339) #22	WDR4 (ENSSHBG00005019343) #24	NDUFV3 (ENSSHBG00005019346) #25	PKNOX1 (ENSSHBG00005019349) #26	ENSSHBG00005019355 #27	CBS (ENSSHBG00005000427) #27	U2AF1 (ENSSHBG00005009756) #28	CRYAA (ENSSHBG00005009784) #29	SIK1 (ENSSHBG00005009793) #30	HSF2BP (ENSSHBG00005009817) #32	ENSSHBG00005009836 #33	PDXK (ENSSHBG00005009861) #34	AGPAT3 (ENSSHBG00005009891) #37	TRAPPC10 (ENSSHBG00005009916)	PWP2 (ENSSHBG00005010009)	GATD3 (ENSSHBG00005010181)
Golden eagle	MODERN SPECIES	23	FAM3B (ENSACCG00020007233)	MX1 (ENSACCG00020007248)	TMPRSS2 (ENSACCG00020007290) #7	RIPK4 (ENSACCG00020007325) #8	ENSACCG00020007388	PRDM15 (ENSACCG00020007436) #9	C2CD2 (ENSACCG00020007512) #10	ZBTB21 (ENSACCG00020007548) #11	UMODL1 (ENSACCG00020007566) #12	ABCG1 (ENSACCG00020007594) #13	TFF2 (ENSACCG00020007620) #16	TMPRSS3 (ENSACCG00020007654) #18	UBASH3A (ENSACCG00020007674) #19	RSPH1 (ENSACCG00020007688) #20	SLC37A1 (ENSACCG00020007707) #21	PDE9A (ENSACCG00020007792) #22	WDR4 (ENSACCG00020007850) #24	NDUFV3 (ENSACCG00020007876) #25	PKNOX1 (ENSACCG00020007897) #26	ENSACCG00020007941 #27	CBS (ENSACCG00020007976) #27	U2AF1 (ENSACCG00020000366) #28	CRYAA (ENSACCG00020000396) #29	SIK1 (ENSACCG00020000415) #30	HSF2BP (ENSACCG00020000473) #32	ENSACCG00020000551 #33	AGPAT3 (ENSACCG00020000595) #37	TRAPPC10 (ENSACCG00020000627)	PWP2 (ENSACCG00020000686)	GATD3 (ENSACCG00020000749)	ICOSLG (ENSACCG00020000802)
African ostrich	MODERN SPECIES	769	MX1 (ENSSCUG00000012037)	TMPRSS2 (ENSSCUG00000012041) #7	RIPK4 (ENSSCUG00000012044) #8	ENSSCUG00000012048	PRDM15 (ENSSCUG00000012056) #9	C2CD2 (ENSSCUG00000012063) #10	ZBTB21 (ENSSCUG00000012066) #11	ENSSCUG00000012067 #12	ABCG1 (ENSSCUG00000012073) #13	TFF2 (ENSSCUG00000012074) #16	ENSSCUG00000012076	TMPRSS3 (ENSSCUG00000012081) #18	UBASH3A (ENSSCUG00000012087) #19	RSPH1 (ENSSCUG00000012092) #20	SLC37A1 (ENSSCUG00000012095) #21	PDE9A (ENSSCUG00000012105) #22	WDR4 (ENSSCUG00000012111) #24	ENSSCUG00000012114 #25	PKNOX1 (ENSSCUG00000012117) #26	ENSSCUG00000012127 #27	CBS (ENSSCUG00000012140) #27	U2AF1 (ENSSCUG00000012146) #28	CRYAA (ENSSCUG00000012154) #29	SIK1 (ENSSCUG00000012156) #30	HSF2BP (ENSSCUG00000012165) #32	ENSSCUG00000012171 #33	PDXK (ENSSCUG00000012182) #34	AGPAT3 (ENSSCUG00000012198) #37	TRAPPC10 (ENSSCUG00000012202)	PWP2 (ENSSCUG00000012205)	GATD3 (ENSSCUG00000012211)
Australian saltwater crocodile	MODERN SPECIES	27	ENSCPRG00005016122	ENSCPRG00005016133	ENSCPRG00005016141	TMPRSS2 (ENSCPRG00005016148) #7	RIPK4 (ENSCPRG00005016165) #8	ENSCPRG00005016167	PRDM15 (ENSCPRG00005016176) #9	C2CD2 (ENSCPRG00005016182) #10	ZBTB21 (ENSCPRG00005016188) #11	UMODL1 (ENSCPRG00005016194) #12	ABCG1 (ENSCPRG00005016219) #13	TMPRSS3 (ENSCPRG00005016234) #18	UBASH3A (ENSCPRG00005016241) #19	RSPH1 (ENSCPRG00005016260) #20	SLC37A1 (ENSCPRG00005016286) #21	PDE9A (ENSCPRG00005016345) #22	WDR4 (ENSCPRG00005016385) #24	ENSCPRG00005016392	PKNOX1 (ENSCPRG00005016400) #26	ENSCPRG00005016414 #27	CBS (ENSCPRG00005016418) #27	U2AF1 (ENSCPRG00005016421) #28	CRYAA (ENSCPRG00005016425) #29	SIK1 (ENSCPRG00005016431) #30	HSF2BP (ENSCPRG00005016440) #32	ENSCPRG00005016442	ENSCPRG00005016447 #33	PDXK (ENSCPRG00005016474) #34	AGPAT3 (ENSCPRG00005016481) #37	TRAPPC10 (ENSCPRG00005016491)	PWP2 (ENSCPRG00005016498)
Cryptodira	ANCESTRAL SPECIES		ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00730000113741	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334.j #16	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334.j #16	ENSGT01070000254012	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.bb #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Testudinidae	ANCESTRAL SPECIES		ENSGT00940000155207.a.b #7	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT00940000161334.j #16	ENSGT01070000254012	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.bb #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Abingdon island giant tortoise	MODERN SPECIES	193								ABCG1 (ENSCABG00000020992) #13	TFF3 (ENSCABG00000020991) #14	TFF2 (ENSCABG00000020990) #16	ENSCABG00000020989	TMPRSS3 (ENSCABG00000020986) #18	UBASH3A (ENSCABG00000020969) #19	RSPH1 (ENSCABG00000020958) #20	SLC37A1 (ENSCABG00000020877) #21	PDE9A (ENSCABG00000020861) #22
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005001600	ENSGEVG00005001562	ENSGEVG00005001544 #7	RIPK4 (ENSGEVG00005001522) #8	ENSGEVG00005001504	PRDM15 (ENSGEVG00005001471) #9	C2CD2 (ENSGEVG00005001430) #10	ZBTB21 (ENSGEVG00005001414) #11	ENSGEVG00005001398 #12	ABCG1 (ENSGEVG00005001379) #13	TFF2 (ENSGEVG00005001355) #16	ENSGEVG00005001325	TMPRSS3 (ENSGEVG00005001298) #18	UBASH3A (ENSGEVG00005001268) #19	SLC37A1 (ENSGEVG00005001209) #21	PDE9A (ENSGEVG00005001079) #22	WDR4 (ENSGEVG00005000994) #24	ENSGEVG00005000977 #25	PKNOX1 (ENSGEVG00005000925) #26	ENSGEVG00005000868 #27	CBS (ENSGEVG00005000807) #27	U2AF1 (ENSGEVG00005000755) #28	CRYAA (ENSGEVG00005000741) #29	SIK1 (ENSGEVG00005000723) #30	HSF2BP (ENSGEVG00005000709) #32	ENSGEVG00005000688 #33	PDXK (ENSGEVG00005000653) #34	AGPAT3 (ENSGEVG00005000632) #37	TRAPPC10 (ENSGEVG00005000565)	PWP2 (ENSGEVG00005000519)	GATD3 (ENSGEVG00005000495)
Emydidae	ANCESTRAL SPECIES	28	ENSGT00940000159908 #8	ENSGT00870000136508.c.b	ENSGT00940000157890 #9	ENSGT00530000063764.a.e #10	ENSGT00940000161028 #11	ENSGT00940000159975 #12	ENSGT00940000160131 #13	ENSGT00940000162416 #14	ENSGT01070000254068	ENSGT00940000161334.j #16	ENSGT01070000254012	ENSGT00940000158589 #18	ENSGT00940000160841 #19	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505.bb #26	ENSGT00510000047027.n #27	ENSGT00510000047027.m #27	ENSGT00950000183152.B.c.a #28	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000011821 #33	ENSGT00390000003874 #34	ENSGT00950000186123.b	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	10	ENSTMTG00000014957 #8	ENSTMTG00000014933	ENSTMTG00000014892 #9	ENSTMTG00000014819 #10	ENSTMTG00000014802 #11	ENSTMTG00000014732 #12	ENSTMTG00000014703 #13	ENSTMTG00000014694	TFF2 (ENSTMTG00000014687) #16	ENSTMTG00000014672	ENSTMTG00000014661	ENSTMTG00000014626 #18	ENSTMTG00000014513 #19	RSPH1 (ENSTMTG00000014483) #20	ENSTMTG00000014424 #21	ENSTMTG00000013951 #22	ENSTMTG00000013902 #24	ENSTMTG00000013894 #25	ENSTMTG00000013846 #26	ENSTMTG00000012690 #27	ENSTMTG00000012536 #27	ENSTMTG00000012514 #28	ENSTMTG00000012501 #29	ENSTMTG00000012476 #30	ENSTMTG00000012447 #32	ENSTMTG00000012286 #33
Three-toed box turtle	MODERN SPECIES	11	ENSTMTG00000021573	ENSTMTG00000021559 #7	ENSTMTG00000021556 #8	ENSTMTG00000021549	ENSTMTG00000021533 #9	ENSTMTG00000021482 #10	ENSTMTG00000021448 #11	ENSTMTG00000021439 #12	ENSTMTG00000021417 #13	ENSTMTG00000021408	ENSTMTG00000021397 #16	ENSTMTG00000021391	ENSTMTG00000021373 #18	ENSTMTG00000021326 #19	ENSTMTG00000021303 #21	ENSTMTG00000021194 #22	ENSTMTG00000021140 #24	ENSTMTG00000021129	ENSTMTG00000021113 #26	ENSTMTG00000020526 #27	ENSTMTG00000020485 #27	U2AF1 (ENSTMTG00000020482) #28	ENSTMTG00000020478 #29	ENSTMTG00000020466 #30	ENSTMTG00000020457 #32	ENSTMTG00000020443 #33
painted turtle	MODERN SPECIES	2389	DSCAM (ENSCPBG00000012456)	BACE2 (ENSCPBG00000012845)	FAM3B (ENSCPBG00000012846)	ENSCPBG00000012848	ENSCPBG00000012852	ENSCPBG00000012892	TMPRSS2 (ENSCPBG00000012905) #7	RIPK4 (ENSCPBG00000012906) #8	ENSCPBG00000012908	PRDM15 (ENSCPBG00000012917) #9	C2CD2 (ENSCPBG00000012921) #10	ZBTB21 (ENSCPBG00000012923) #11	UMODL1 (ENSCPBG00000012927) #12	ABCG1 (ENSCPBG00000012934) #13	TFF3 (ENSCPBG00000012936) #14	PDE9A (ENSCPBG00000012938) #22	WDR4 (ENSCPBG00000012943) #24	ENSCPBG00000012948 #25	PKNOX1 (ENSCPBG00000012951) #26	ENSCPBG00000012954 #27	ENSCPBG00000012957	CBS (ENSCPBG00000012958) #27	U2AF1 (ENSCPBG00000012960) #28	CRYAA (ENSCPBG00000012962) #29	SIK1 (ENSCPBG00000012966) #30	HSF2BP (ENSCPBG00000012970) #32	BCOR (ENSCPBG00000012975)	MID1IP1 (ENSCPBG00000013263)	TSPAN7 (ENSCPBG00000013267)
Chinese turtle	MODERN SPECIES	2218	ENTREP1 (ENSPSIG00000011516)	ENSPSIG00000011823	FXN (ENSPSIG00000014478)	PIP5K1B (ENSPSIG00000014991)	PGM5 (ENSPSIG00000016282)	ENSPSIG00000017206	DOCK8 (ENSPSIG00000010032)	ENSPSIG00000012215	KANK1 (ENSPSIG00000012412)	DMRT1 (ENSPSIG00000013048)	ENSPSIG00000000444	DMRT2 (ENSPSIG00000013575)	ENSPSIG00000000453	RSPH1 (ENSPSIG00000013753) #20	SLC37A1 (ENSPSIG00000013862) #21	PDE9A (ENSPSIG00000015118) #22	WDR4 (ENSPSIG00000017237) #24	NDUFV3 (ENSPSIG00000017660) #25	PKNOX1 (ENSPSIG00000017680) #26	ENSPSIG00000018134 #27	CBS (ENSPSIG00000018147) #27	U2AF1 (ENSPSIG00000007232) #28	CRYAA (ENSPSIG00000007237) #29	SIK1 (ENSPSIG00000007456) #30	HSF2BP (ENSPSIG00000007635) #32	ENSPSIG00000008152 #33	PDXK (ENSPSIG00000008160) #34	AGPAT3 (ENSPSIG00000008828) #37	TRAPPC10 (ENSPSIG00000009311)	PWP2 (ENSPSIG00000009783)	GATD3 (ENSPSIG00000010691)
Coelacanth	MODERN SPECIES	1452															SLC37A1 (ENSLACG00000011498) #21	PDE9A (ENSLACG00000010230) #22	WDR4 (ENSLACG00000009655) #24	NDUFV3 (ENSLACG00000009224) #25	PKNOX1 (ENSLACG00000008017) #26	CBS (ENSLACG00000006960) #27	U2AF1 (ENSLACG00000005228) #28	MAN1A2 (ENSLACG00000002202)	VTCN1 (ENSLACG00000001091)
Actinopterygii	ANCESTRAL SPECIES	243													ENSGT00390000011821 #33	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00950000183152.B.c.a #28	ENSGT00510000047027 #27	ENSGT00940000160159 #29	ENSGT00940000154989 #30	ENSGT00390000008490 #32	ENSGT00390000003874 #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a
Neopterygii	ANCESTRAL SPECIES	219				ENSGT00940000161651	ENSGT00940000162722	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00940000160503	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589 #18
Osteoglossocephalai	ANCESTRAL SPECIES	53	ENSGT00940000163874	ENSGT00390000007644	ENSGT00950000182808.a.a.a.a.a	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18
Osteoglossiformes	ANCESTRAL SPECIES	328															ENSGT00390000011821 #33	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000159393	ENSGT00940000159775.d	ENSGT00390000016547	ENSGT00940000158449	ENSGT00890000139463.b.b.b.a	ENSGT00390000003874.a.b #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00390000003873	ENSGT00550000074981
P. kingsleyae	MODERN SPECIES	467									gjb8 (ENSPKIG00000003687)	gja3 (ENSPKIG00000003667)	ZMYM2 (ENSPKIG00000003622)	pspc1 (ENSPKIG00000003578)	mphosph8 (ENSPKIG00000003488)	ENSPKIG00000003454	ENSPKIG00000003422 #33	PDE9A (ENSPKIG00000003345) #22	wdr4 (ENSPKIG00000003403) #24	ENSPKIG00000003314	ENSPKIG00000003299 #25	pknox1.1 (ENSPKIG00000003263) #26	TMPRSS3 (ENSPKIG00000003233) #18	ENSPKIG00000003013	pdxkb (ENSPKIG00000002898) #34	agpat3 (ENSPKIG00000002841) #37	TRAPPC10 (ENSPKIG00000002787)	pwp2h (ENSPKIG00000002693)
Asian bonytongue	MODERN SPECIES	5	tmem39a (ENSSFOG00015029844)	ENSSFOG00015032534	ENSSFOG00015000151	dusp27 (ENSSFOG00015000217)	ENSSFOG00015000231	ENSSFOG00015030454	ENSSFOG00015000252	ENSSFOG00015000387	ENSSFOG00015025471	ENSSFOG00015000478	cpox (ENSSFOG00015000500)	prrg1 (ENSSFOG00015024994)	ENSSFOG00015000545	ENSSFOG00015025496	ENSSFOG00015003932 #33	PDE9A (ENSSFOG00015024742) #22	wdr4 (ENSSFOG00015025663) #24	si:ch211-140m22.7 (ENSSFOG00015003867)	ENSSFOG00015032139 #25	pknox1.1 (ENSSFOG00015003790) #26	ENSSFOG00015003689 #18	pdxkb (ENSSFOG00015003619) #34	agpat3 (ENSSFOG00015027195) #37	TRAPPC10 (ENSSFOG00015003451)	pwp2h (ENSSFOG00015003316)	ENSSFOG00015028038	ENSSFOG00015003266	zgc:172295 (ENSSFOG00015003129)	FAM124A (ENSSFOG00015003098)	serpine3 (ENSSFOG00015003064)	ints6 (ENSSFOG00015002988)
Clupeocephala	ANCESTRAL SPECIES	23	ENSGT00950000182808.a.a.a.a.a	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000003874.a.a #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00940000163587.a.b.a.d.b	ENSGT01000000214434.B.a.a	ENSGT00590000083134.a.a	ENSGT00940000160941	ENSGT00390000016655.a.a.b	ENSGT00940000169295	ENSGT00940000158527
Euteleosteomorpha	ANCESTRAL SPECIES	29	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00940000154641.C.b.g.b	ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000003874.a.a #34	ENSGT00950000182836.b.b.b.a #37	ENSGT00940000162556.A.b	ENSGT00940000154486.b.b.a.b	ENSGT00940000154486.b.a.a.b.e.a.a.a	ENSGT00390000016151	ENSGT00510000049102	ENSGT00940000160532.h	ENSGT00390000013151.a.a.b
Acanthomorphata	ANCESTRAL SPECIES	72	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000016547	ENSGT00940000158449	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352
Euacanthomorphacea	ANCESTRAL SPECIES	43	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352	ENSGT00940000154846.a.b
Percomorphaceae	ANCESTRAL SPECIES	43	ENSGT00950000182808.a.a.a.a.a	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00990000210518	ENSGT00390000015352	ENSGT00940000154846.a.b	ENSGT00940000156402.A.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00990000210518	ENSGT00390000000220.B.c.b	ENSGT00390000015050.`b.a	ENSGT00530000063686.a.a	ENSGT00940000160205	ENSGT01090000259987.a.a.a.p
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00990000210518	ENSGT00390000000220.B.c.b	ENSGT00390000015050.`b.a	ENSGT00530000063686.a.a	ENSGT00940000160205	ENSGT01090000259987.a.a.a.p
Eupercaria	ANCESTRAL SPECIES	25	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352	ENSGT00940000154846.a.b
Eupecaria_A	ANCESTRAL SPECIES	24	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352	ENSGT00940000154846.a.b
Ballan wrasse	MODERN SPECIES	78												efnb2a (ENSLBEG00000021343)	arglu1a (ENSLBEG00000021379)	RRP1 (ENSLBEG00000021417) #33	slc37a1 (ENSLBEG00000021479) #21	PDE9A (ENSLBEG00000021554) #22	wdr4 (ENSLBEG00000021605) #24	ENSLBEG00000021633	ENSLBEG00000021668	pknox1.1 (ENSLBEG00000021695) #26	TMPRSS3 (ENSLBEG00000021752) #18	ENSLBEG00000021837	ccdc93 (ENSLBEG00000021931)	si:dkey-251i10.3 (ENSLBEG00000022133)	insig2 (ENSLBEG00000022277)	EN1 (ENSLBEG00000022326)	ENSLBEG00000022340	gja1b (ENSLBEG00000022370)	C1QL2 (ENSLBEG00000022410)	esd (ENSLBEG00000022454)	HTR2A (ENSLBEG00000022509)
Eupecaria_B	ANCESTRAL SPECIES	24	ENSGT00940000159862.a	ENSGT00940000165735	ENSGT00950000182808.a.a.a.a.a	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352	ENSGT00940000154846.a.b
Eupecaria_C	ANCESTRAL SPECIES	24	ENSGT00950000182808.a.a.a.a.a	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00940000175678	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352	ENSGT00940000164697.a
Gilthead seabream	MODERN SPECIES	23	arglu1a (ENSSAUG00010022305)	ENSSAUG00010022306	ENSSAUG00010022322	ENSSAUG00010022323	ENSSAUG00010022324	ENSSAUG00010022327	IL10RB (ENSSAUG00010022330)	il10rb (ENSSAUG00010022337)	ENSSAUG00010022351	TMEM50B (ENSSAUG00010022352)	TMEM50B (ENSSAUG00010022354)	ENSSAUG00010022373	ENSSAUG00010022376	ENSSAUG00010022381 #33	slc37a1 (ENSSAUG00010022400) #21	PDE9A (ENSSAUG00010022783) #22	wdr4 (ENSSAUG00010022796) #24	ENSSAUG00010001316	NDUFV3 (ENSSAUG00010001379)	pknox1.1 (ENSSAUG00010001426) #26	ENSSAUG00010001473 #18	ENSSAUG00010001476	ccdc93 (ENSSAUG00010001670)	si:dkey-251i10.3 (ENSSAUG00010002484)	si:dkey-251i10.3 (ENSSAUG00010002487)	ENSSAUG00010002502 #18	ENSSAUG00010002508	insig2 (ENSSAUG00010002512)	ENSSAUG00010002525	EN1 (ENSSAUG00010002527)	ENSSAUG00010002529
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	56							ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00940000175678	ENSGT00940000159505 #26	ENSGT00940000158589.b.b #18	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352	ENSGT00940000164697.a	ENSGT01040000242008
Large yellow croaker	MODERN SPECIES	490	ENSLCRG00005011682	ENSLCRG00005011681	ENSLCRG00005011678	ENSLCRG00005011676	ENSLCRG00005011675	ENSLCRG00005011673	C2orf76 (ENSLCRG00005011670)	STEAP3 (ENSLCRG00005011669)	TMPRSS3 (ENSLCRG00005011667) #18	C1QL2 (ENSLCRG00005011643)	EN1 (ENSLCRG00005011641)	marco (ENSLCRG00005011637)	insig2 (ENSLCRG00005011599)	si:dkey-251i10.3 (ENSLCRG00005011596)	slc37a1 (ENSLCRG00005011230) #21	PDE9A (ENSLCRG00005011218) #22	WDR4 (ENSLCRG00005011217) #24	ENSLCRG00005011214	ENSLCRG00005011206	pknox1.1 (ENSLCRG00005011166) #26	ENSLCRG00005011161 #18	ENSLCRG00005011159	ccdc93 (ENSLCRG00005010392)	ENSLCRG00005010365 #33	TMEM50B (ENSLCRG00005010359)	ENSLCRG00005010358	il10rb (ENSLCRG00005010356)	ENSLCRG00005010353	ENSLCRG00005010352	ENSLCRG00005010350	ENSLCRG00005010349
Perciformes	ANCESTRAL SPECIES	23	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352	ENSGT00940000154846.a.b
Perciformes_a	ANCESTRAL SPECIES	23	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352	ENSGT00940000154846.a.b
Pike perch	MODERN SPECIES	80	ENSSLUG00000014662	ENSSLUG00000014657	C21orf62 (ENSSLUG00000014654)	ENSSLUG00000014653	ENSSLUG00000014645	ENSSLUG00000014641	ENSSLUG00000014636	IL10RB (ENSSLUG00000014633)	ENSSLUG00000014629	ENSSLUG00000014625	dnajc3a (ENSSLUG00000014547)	ENSSLUG00000014521	TMEM50B (ENSSLUG00000014512)	ENSSLUG00000014494 #33	slc37a1 (ENSSLUG00000012584) #21	PDE9A (ENSSLUG00000012124) #22	wdr4 (ENSSLUG00000012108) #24	ENSSLUG00000012103	ENSSLUG00000015028 #25	pknox1.1 (ENSSLUG00000015024) #26	TMPRSS3 (ENSSLUG00000015014) #18	ENSSLUG00000015006	ccdc93 (ENSSLUG00000014346)	si:dkey-251i10.3 (ENSSLUG00000014282)	insig2 (ENSSLUG00000014155)	EN1 (ENSSLUG00000014137)	MARCO (ENSSLUG00000014133)	C1QL2 (ENSSLUG00000014128)	ENSSLUG00000012780	ENSSLUG00000012717	ENSSLUG00000012702
Channel bull blenny	MODERN SPECIES	13	ENSCGOG00000013611	slc10a2 (ENSCGOG00000013610)	gtpbp8 (ENSCGOG00000013603)	ENSCGOG00000013598	efnb2a (ENSCGOG00000013595)	arglu1a (ENSCGOG00000013590)	ENSCGOG00000013587	ENSCGOG00000013582	ENSCGOG00000013580	ENSCGOG00000013575	ENSCGOG00000013571	ENSCGOG00000013568	ENSCGOG00000013564	ENSCGOG00000013559 #33	slc37a1 (ENSCGOG00000012859) #21	PDE9A (ENSCGOG00000012727) #22	wdr4 (ENSCGOG00000010355) #24	ENSCGOG00000010352	ENSCGOG00000010351 #25	pknox1.1 (ENSCGOG00000010339) #26	TMPRSS3 (ENSCGOG00000010336) #18	ENSCGOG00000010335	ccdc93 (ENSCGOG00000010209)	si:dkey-251i10.3 (ENSCGOG00000010203)	insig2 (ENSCGOG00000010172)	EN1 (ENSCGOG00000010167)	ENSCGOG00000010165	ENSCGOG00000010164	C1QL2 (ENSCGOG00000010160)	ENSCGOG00000010158	zgc:101851 (ENSCGOG00000010150)
Cottioidei	ANCESTRAL SPECIES	30	ENSGT00940000165735	ENSGT00950000182808.a.a.a.a.a	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00390000016499	ENSGT00940000157314.B	ENSGT00510000048978	ENSGT00940000173067	ENSGT00940000160205	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00940000175678	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00940000154846.a.b	ENSGT00390000015352	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a
Lumpfish	MODERN SPECIES	13															ENSCLMG00005008537	PDE9A (ENSCLMG00005008149) #22	wdr4 (ENSCLMG00005008145) #24	ENSCLMG00005008143	ENSCLMG00005008142	pknox1.1 (ENSCLMG00005008140) #26	TMPRSS3 (ENSCLMG00005008132) #18	ENSCLMG00005008127	ccdc93 (ENSCLMG00005007955)	si:dkey-251i10.3 (ENSCLMG00005007949)	insig2 (ENSCLMG00005007948)	EN1 (ENSCLMG00005007946)	ENSCLMG00005007892	C1QL2 (ENSCLMG00005007890)	DBI (ENSCLMG00005007888)	zgc:101851 (ENSCLMG00005007887)	ENSCLMG00005007886
Stickleback	MODERN SPECIES	16							mmadhcb (ENSGACG00000001417)	ENSGACG00000001422	ENSGACG00000001424	ENSGACG00000001427	ENSGACG00000001430	ENSGACG00000001431	ENSGACG00000001436	ENSGACG00000001438 #33	slc37a1 (ENSGACG00000001446) #21	PDE9A (ENSGACG00000001450) #22	wdr4 (ENSGACG00000001454) #24	ENSGACG00000001455	pknox1.1 (ENSGACG00000001456) #26	TMPRSS3 (ENSGACG00000001457) #18	ENSGACG00000001462	ccdc93 (ENSGACG00000001463)	si:dkey-251i10.3 (ENSGACG00000001488)	insig2 (ENSGACG00000001491)	EN1 (ENSGACG00000001508)	ENSGACG00000001509	DBI (ENSGACG00000001512)	zgc:101851 (ENSGACG00000001517)	ENSGACG00000001519	UBXN4 (ENSGACG00000001530)	ENSGACG00000001531
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00390000011515	ENSGT00940000154817.b.a	ENSGT00940000159158	ENSGT00940000159862.a	ENSGT00940000165735.b	ENSGT00950000182808.a.a.a.a.a	ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00940000159505 #26	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000015352	ENSGT01100000263523.A.z.d.h	ENSGT01100000263532.B.a.a	ENSGT01100000263523.F
Fugu	MODERN SPECIES		ENSTRUG00000033480	inhbb (ENSTRUG00000020085)	ENSTRUG00000025216	slc10a2 (ENSTRUG00000001580)	ENSTRUG00000032182	ENSTRUG00000001494	ENSTRUG00000032922	ENSTRUG00000030055	ENSTRUG00000017620	ENSTRUG00000017619	il10rb (ENSTRUG00000022369)	ifngr2 (ENSTRUG00000017603)	TMEM50B (ENSTRUG00000024423)	ENSTRUG00000017592 #33	slc37a1 (ENSTRUG00000017573) #21	PDE9A (ENSTRUG00000027030) #22	wdr4 (ENSTRUG00000002237) #24	ENSTRUG00000026567	pknox1.1 (ENSTRUG00000032588) #26	ENSTRUG00000023987	ccdc93 (ENSTRUG00000014114)	si:dkey-251i10.3 (ENSTRUG00000014271)	insig2 (ENSTRUG00000014294)	EN1 (ENSTRUG00000014340)	ENSTRUG00000022399	C1QL2 (ENSTRUG00000001345)	ENSTRUG00000001339	ENSTRUG00000031007	ENSTRUG00000024208	ENSTRUG00000028153	ENSTRUG00000032688
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT00730000111249	ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00390000000220.B.c.b	ENSGT00390000015050.`b.a	ENSGT00530000063686.a.a	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00990000210518	ENSGT00940000160205	ENSGT01090000259987.a.a.a.p	ENSGT00940000154846.a.b	ENSGT00390000015352	ENSGT00390000008042.A.b.c
Anabantaria	ANCESTRAL SPECIES	45					ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000015352	ENSGT00940000154846.a.b	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205
Anabantoidei	ANCESTRAL SPECIES	37					ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000015352	ENSGT00940000154846.a.b
Climbing perch	MODERN SPECIES	12	ENSATEG00000004631	ENSATEG00000004817	ENSATEG00000004863	ENSATEG00000004886	ENSATEG00000004912	ENSATEG00000027461	ENSATEG00000004918	ENSATEG00000004925	IL10RB (ENSATEG00000025353)	ENSATEG00000004984	ENSATEG00000028377	TMEM50B (ENSATEG00000005026)	ENSATEG00000026252	ENSATEG00000005045 #33	slc37a1 (ENSATEG00000005050) #21	PDE9A (ENSATEG00000005121) #22	wdr4 (ENSATEG00000005195) #24	ENSATEG00000005206	ENSATEG00000005228 #25	pknox1.1 (ENSATEG00000005278) #26	ENSATEG00000005294 #18	CCDC93 (ENSATEG00000005402)	ENSATEG00000005429	INSIG2 (ENSATEG00000029786)	EN1 (ENSATEG00000005465)	MARCO (ENSATEG00000005491)	C1QL2 (ENSATEG00000005501)	ENSATEG00000005582	ENSATEG00000005619	ENSATEG00000005649	ENSATEG00000005666
Zig-zag eel	MODERN SPECIES	13									ENSMAMG00000007035	ENSMAMG00000007055	ENSMAMG00000007072	ENSMAMG00000007088	TMEM50B (ENSMAMG00000025738)	ENSMAMG00000007131 #33	slc37a1 (ENSMAMG00000007150) #21	PDE9A (ENSMAMG00000007219) #22	wdr4 (ENSMAMG00000007247) #24	ENSMAMG00000007263 #25	pknox1.1 (ENSMAMG00000007305) #26	ENSMAMG00000007351 #18	ENSMAMG00000024410	CCDC93 (ENSMAMG00000007390)	ENSMAMG00000025535	INSIG2 (ENSMAMG00000026450)	EN1 (ENSMAMG00000007474)	ENSMAMG00000007507	ENSMAMG00000007522	ENSMAMG00000007555	ENSMAMG00000007587	ENSMAMG00000008526	ENSMAMG00000008539
Carangaria	ANCESTRAL SPECIES	12	ENSGT00940000157541.f.d	ENSGT00530000063686.a.a	ENSGT00940000160205	ENSGT01090000259987.a.a.a.p	ENSGT00940000154641.C.b.g.b	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00990000210518	ENSGT00940000154846.a.b	ENSGT00390000015352	ENSGT00390000008042.A.b.c	ENSGT00940000156913.b.j.b	ENSGT00950000183074.C
Carangaria_A	ANCESTRAL SPECIES	67	ENSGT00940000157541.f.d	ENSGT00530000063686.a.a	ENSGT00940000160205	ENSGT01090000259987.a.a.a.p	ENSGT00940000154641.C.b.g.b	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00990000210518	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352	ENSGT00940000154846.a.b
Barramundi perch	MODERN SPECIES	280			ENSLCAG00010014615	ENSLCAG00010014607	C21orf62 (ENSLCAG00010014605)	ENSLCAG00010014603	ENSLCAG00010014601	ENSLCAG00010014599	IL10RB (ENSLCAG00010014596)	ENSLCAG00010014587	ENSLCAG00010014585	ifngr2 (ENSLCAG00010014581)	TMEM50B (ENSLCAG00010014578)	ENSLCAG00010014570 #33	slc37a1 (ENSLCAG00010014559) #21	PDE9A (ENSLCAG00010014540) #22	wdr4 (ENSLCAG00010014533) #24	ENSLCAG00010014529	ENSLCAG00010014524 #25	pknox1.1 (ENSLCAG00010014513) #26	ENSLCAG00010014505 #18	ENSLCAG00010014502	ccdc93 (ENSLCAG00010014468)	si:dkey-251i10.3 (ENSLCAG00010014457)	insig2 (ENSLCAG00010014449)	ENSLCAG00010014447	MARCO (ENSLCAG00010014442)	C1QL2 (ENSLCAG00010014437)	STEAP3 (ENSLCAG00010014434)	C2orf76 (ENSLCAG00010014433)	DBI (ENSLCAG00010014424)
Seriola	ANCESTRAL SPECIES	95	ENSGT00390000015050.`b.a	ENSGT00940000158231.k	ENSGT00940000157314.B	ENSGT00510000048978	ENSGT00940000158231.l	ENSGT00390000016499	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00940000157541.f.d	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00940000168180.a	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352	ENSGT00940000154846.a.b
Greater amberjack	MODERN SPECIES	79	ENSSDUG00000000725	ENSSDUG00000000716	ENSSDUG00000000708	ENSSDUG00000000690	C21orf62 (ENSSDUG00000000682)	ENSSDUG00000000668	UBXN4 (ENSSDUG00000000657)	ENSSDUG00000000646	rnd3b (ENSSDUG00000000627)	zgc:113274 (ENSSDUG00000000610)	ENSSDUG00000000604	ENSSDUG00000000592	TMEM50B (ENSSDUG00000000569)	ENSSDUG00000000551 #33	slc37a1 (ENSSDUG00000000459) #21	PDE9A (ENSSDUG00000000390) #22	wdr4 (ENSSDUG00000000378) #24	ENSSDUG00000000365	ENSSDUG00000000357 #25	pknox1.1 (ENSSDUG00000000309) #26	ENSSDUG00000000250 #18	ENSSDUG00000000207	ccdc93 (ENSSDUG00000000195)	si:dkey-251i10.3 (ENSSDUG00000000153)	insig2 (ENSSDUG00000000106)	EN1 (ENSSDUG00000021985)	ENSSDUG00000021976	ENSSDUG00000021970	ENSSDUG00000021967	C1QL2 (ENSSDUG00000021952)	STEAP3 (ENSSDUG00000021946)
Yellowtail amberjack	MODERN SPECIES	2968	ENSSLDG00000002891	ENSSLDG00000002872	ENSSLDG00000002830	ENSSLDG00000002798	ENSSLDG00000002784	ENSSLDG00000002708	ENSSLDG00000002686	rnd3b (ENSSLDG00000002633)	ENSSLDG00000002610	ENSSLDG00000002599	TMEM50B (ENSSLDG00000002565)	ENSSLDG00000002538 #33	ENSSLDG00000002513	ENSSLDG00000002484	slc37a1 (ENSSLDG00000002364) #21	PDE9A (ENSSLDG00000002241) #22	wdr4 (ENSSLDG00000002222) #24	ENSSLDG00000002194	ENSSLDG00000002177 #25	pknox1.1 (ENSSLDG00000002133) #26	ENSSLDG00000002107 #18	ENSSLDG00000002094 #18	ENSSLDG00000002027	ccdc93 (ENSSLDG00000001983)	si:dkey-251i10.3 (ENSSLDG00000001899)	insig2 (ENSSLDG00000001871)	EN1 (ENSSLDG00000001864)	ENSSLDG00000001757	C1QL2 (ENSSLDG00000001685)	STEAP3 (ENSSLDG00000001677)	zgc:101851 (ENSSLDG00000001607)
Pleuronectoidei	ANCESTRAL SPECIES	105												ENSGT00940000158406	ENSGT00510000051617	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00940000175678	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00390000015352
Turbot	MODERN SPECIES	5											ENSSMAG00000017396	ENSSMAG00000017407	ENSSMAG00000017421	ENSSMAG00000017442	slc37a1 (ENSSMAG00000017478) #21	PDE9A (ENSSMAG00000017545) #22	WDR4 (ENSSMAG00000017602) #24	ENSSMAG00000017631	ENSSMAG00000017647	pknox1.1 (ENSSMAG00000017657) #26	ENSSMAG00000017688 #18	ENSSMAG00000017708	CCDC93 (ENSSMAG00000017723)	ENSSMAG00000017825	INSIG2 (ENSSMAG00000017830)	EN1 (ENSSMAG00000017852)	ENSSMAG00000017871	ENSSMAG00000017946	ENSSMAG00000017965	ENSSMAG00000017996	wdr75 (ENSSMAG00000018077)
Tongue sole	MODERN SPECIES	7	ENSCSEG00000020775	ENSCSEG00000020771	ENSCSEG00000020764	tmem237a (ENSCSEG00000020761)	cnot11 (ENSCSEG00000020759)	lcp1 (ENSCSEG00000020752)	ENSCSEG00000020748	itm2bb (ENSCSEG00000020746)	med4 (ENSCSEG00000020743)	sucla2 (ENSCSEG00000020741)	ENSCSEG00000020730	ENSCSEG00000020724	ENSCSEG00000020717	ENSCSEG00000020711 #33	slc37a1 (ENSCSEG00000020705) #21	PDE9A (ENSCSEG00000020701) #22	ENSCSEG00000020696	ENSCSEG00000020694	ENSCSEG00000020693	ENSCSEG00000020692	ifngr2 (ENSCSEG00000020690)	ENSCSEG00000020689	ENSCSEG00000020687	ENSCSEG00000020683	ENSCSEG00000020682	ENSCSEG00000020681 #25	pknox1.1 (ENSCSEG00000020679) #26	TMPRSS3 (ENSCSEG00000020677) #18	ENSCSEG00000020676
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT00530000063686.a.a	ENSGT00940000172822	ENSGT00940000170936	ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00940000160205	ENSGT01090000259987.a.a.a.p
Atherinomorphae	ANCESTRAL SPECIES	68														ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00940000154846.a.b	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205
Cyprinodontiformes	ANCESTRAL SPECIES	48	ENSGT01050000244823.d.b.b.a.a.b.b.b.a	ENSGT00940000174369	ENSGT00940000173606	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00530000068353	ENSGT00940000166969.a	ENSGT00940000155248.wb	ENSGT00940000154486.b.b.a.b	ENSGT00940000154486.b.a.a.b.e.a.a.a	ENSGT00390000016151	ENSGT00940000160532.h	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00940000160205	ENSGT01090000259987.a.a.a.p	ENSGT00940000154846.a.b
Aplocheiloidei	ANCESTRAL SPECIES	104						ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00940000155248.wb	ENSGT00940000154486.b.b.a.b	ENSGT00940000154486.b.a.a.b.e.a.a.a	ENSGT00390000016151	ENSGT00940000160532.h	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00990000205068	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000015352	ENSGT00940000154846.a.b	ENSGT01090000259987.a.a.a.p
Mangrove rivulus	MODERN SPECIES	57	RAPH1 (ENSKMAG00000002345)	pikfyve (ENSKMAG00000002442)	ENSKMAG00000002603	crygm7 (ENSKMAG00000002619)	ENSKMAG00000002628	crygm6 (ENSKMAG00000002639)	si:dkey-57a22.15 (ENSKMAG00000002650)	zgc:153846 (ENSKMAG00000002660)	ENSKMAG00000002681	ENSKMAG00000002695	ENSKMAG00000002712	etv5a (ENSKMAG00000002729)	itgb5 (ENSKMAG00000002781)	rif1 (ENSKMAG00000002852)	tnfaip6 (ENSKMAG00000002891)	PDE9A (ENSKMAG00000002930) #22	wdr4 (ENSKMAG00000002952) #24	ENSKMAG00000002967	ENSKMAG00000003009 #25	pknox1.1 (ENSKMAG00000003031) #26	TMPRSS3 (ENSKMAG00000003086) #18	ENSKMAG00000003096	ccdc93 (ENSKMAG00000003155)	si:dkey-251i10.3 (ENSKMAG00000003300)	insig2 (ENSKMAG00000003330)	EN1 (ENSKMAG00000003345)	MARCO (ENSKMAG00000003365)	C1QL2 (ENSKMAG00000003384)	zgc:101851 (ENSKMAG00000003406)	dbi (ENSKMAG00000003441)	ENSKMAG00000003472
Ovalentaria_B	ANCESTRAL SPECIES	52					ENSGT00940000177543	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352	ENSGT00940000154846.a.b
Pomacentridae	ANCESTRAL SPECIES	130						ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00940000175678	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000008042.A.b.c	ENSGT00390000015352
Pomacentridae_A	ANCESTRAL SPECIES	235														ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00940000175678	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18
Amphiprion	ANCESTRAL SPECIES	273														ENSGT00390000011821 #33	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00940000175678	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18
Clown anemonefish	MODERN SPECIES	1948															slc37a1 (ENSAOCG00000010654) #21	PDE9A (ENSAOCG00000010676) #22	ENSAOCG00000010763	wdr4 (ENSAOCG00000010784) #24	ENSAOCG00000010804
Orange clownfish	MODERN SPECIES	3	pdia5 (ENSAPEG00000000645)	ENSAPEG00000000506	SEMA5B (ENSAPEG00000000420)	ENSAPEG00000000394	slc49a4 (ENSAPEG00000000305)	hspbap1 (ENSAPEG00000024246)	slc15a2 (ENSAPEG00000024226)	ENSAPEG00000024196	ENSAPEG00000024178	cyp27a3 (ENSAPEG00000024170)	ENSAPEG00000024165	ENSAPEG00000024163	ENSAPEG00000024150 #33	slc37a1 (ENSAPEG00000024132) #21	ENSAPEG00000024123	PDE9A (ENSAPEG00000024113) #22	wdr4 (ENSAPEG00000024095) #24	ENSAPEG00000024085	ENSAPEG00000024072	pknox1.1 (ENSAPEG00000024056) #26	ENSAPEG00000024045	TMPRSS3 (ENSAPEG00000024022) #18	CRYGS (ENSAPEG00000024003)	lcmt2 (ENSAPEG00000023989)	ccdc93 (ENSAPEG00000023969)	si:dkey-251i10.3 (ENSAPEG00000023935)	INSIG2 (ENSAPEG00000023918)	ENSAPEG00000023863	EN1 (ENSAPEG00000023852)	ENSAPEG00000023847	MARCO (ENSAPEG00000023833)
Spiny chromis	MODERN SPECIES	996													ENSAPOG00000007464	ENSAPOG00000007490 #33	slc37a1 (ENSAPOG00000007521) #21	PDE9A (ENSAPOG00000007543) #22	wdr4 (ENSAPOG00000007558) #24	ENSAPOG00000007580
Bicolor damselfish	MODERN SPECIES	395								ENSSPAG00000005294	ENSSPAG00000005304	ENSSPAG00000005323	rsph3 (ENSSPAG00000005341)	ENSSPAG00000005348	TMEM50B (ENSSPAG00000005356)	ENSSPAG00000005370 #33	slc37a1 (ENSSPAG00000005389) #21	PDE9A (ENSSPAG00000005476) #22	wdr4 (ENSSPAG00000005499) #24	wdr4 (ENSSPAG00000005525) #24	ENSSPAG00000005546	ENSSPAG00000005561	pknox1.1 (ENSSPAG00000005572) #26	TMPRSS3 (ENSSPAG00000005596) #18	ENSSPAG00000005611	ccdc93 (ENSSPAG00000005621)	si:dkey-251i10.3 (ENSSPAG00000005656)	INSIG2 (ENSSPAG00000005664)	EN1 (ENSSPAG00000005691)	ENSSPAG00000005703	ENSSPAG00000005732
Cichlidae	ANCESTRAL SPECIES	82									ENSGT01090000259987.a.a.a.p	ENSGT00940000170936	ENSGT00940000172822	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000015352	ENSGT00940000154846.a.b	ENSGT00940000156402.A.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	44												ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000015352	ENSGT00940000154846.a.b	ENSGT00940000156402.A.b	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	58													ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000163452.l	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000015352	ENSGT00940000154846.a.b	ENSGT00940000156402.A.b	ENSGT00940000159069
Haplochromini	ANCESTRAL SPECIES	67													ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000163452.l	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000015352	ENSGT00940000154846.a.b	ENSGT00940000156402.A.b	ENSGT00940000159069
Haplochromini_A	ANCESTRAL SPECIES	87													ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b	ENSGT00940000163452.l	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000015352	ENSGT00940000154846.a.b	ENSGT00940000156402.A.b
P. nyererei	MODERN SPECIES	610													ENSPNYG00000022750	mmadhcb (ENSPNYG00000022755)	slc37a1 (ENSPNYG00000022762) #21	PDE9A (ENSPNYG00000022775) #22	wdr4 (ENSPNYG00000022779) #24	ENSPNYG00000022788 #25	pknox1.1 (ENSPNYG00000022799) #26	TMPRSS3 (ENSPNYG00000022810) #18	ccdc93 (ENSPNYG00000022855)	si:dkey-251i10.3 (ENSPNYG00000022865)	insig2 (ENSPNYG00000022870)	ENSPNYG00000022877	EN1 (ENSPNYG00000022882)	ENSPNYG00000022892	C1QL2 (ENSPNYG00000022899)	zgc:101851 (ENSPNYG00000022912)	dbi (ENSPNYG00000022922)	ENSPNYG00000022932	ENSPNYG00000022940
Haplochromini_B	ANCESTRAL SPECIES	76													ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000011294	ENSGT00390000008142	ENSGT00580000081600.c.b.s	ENSGT00940000163452.l	ENSGT00940000160811.c.a	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT00390000015352	ENSGT00940000154846.a.b	ENSGT00940000156402.A.b	ENSGT01100000263532.C.c.a.a.a.e.a
Zebra mbuna	MODERN SPECIES	159													ENSMZEG00005013771	mmadhcb (ENSMZEG00005013762)	slc37a1 (ENSMZEG00005013735) #21	PDE9A (ENSMZEG00005013723) #22	wdr4 (ENSMZEG00005013711) #24	ENSMZEG00005013702 #25	pknox1.1 (ENSMZEG00005013691) #26	TMPRSS3 (ENSMZEG00005013673) #18	ccdc93 (ENSMZEG00005013648)	si:dkey-251i10.3 (ENSMZEG00005013633)	INSIG2 (ENSMZEG00005013631)
Eastern happy	MODERN SPECIES	7												ENSACLG00000005971	mmadhcb (ENSACLG00000005999)	slc37a1 (ENSACLG00000006031) #21	ENSACLG00000006117	PDE9A (ENSACLG00000006122) #22	wdr4 (ENSACLG00000006132) #24	ENSACLG00000006140 #25	pknox1.1 (ENSACLG00000006161) #26	TMPRSS3 (ENSACLG00000006214) #18	ENSACLG00000006241	ccdc93 (ENSACLG00000006247)	si:dkey-251i10.3 (ENSACLG00000006291)	insig2 (ENSACLG00000006300)	ENSACLG00000006319	ENSACLG00000006530	ENSACLG00000006549	EN1 (ENSACLG00000006553)	ENSACLG00000006562	C1QL2 (ENSACLG00000006596)	zgc:101851 (ENSACLG00000006622)
Burton s mouthbrooder	MODERN SPECIES	646													ENSHBUG00000020707	mmadhcb (ENSHBUG00000020746)	slc37a1 (ENSHBUG00000020906) #21	PDE9A (ENSHBUG00000020924) #22	wdr4 (ENSHBUG00000020935) #24	ENSHBUG00000020945 #25	pknox1.1 (ENSHBUG00000020992) #26	TMPRSS3 (ENSHBUG00000021035) #18	ccdc93 (ENSHBUG00000021055)	si:dkey-251i10.3 (ENSHBUG00000000649)	insig2 (ENSHBUG00000021080)	ENSHBUG00000021114	EN1 (ENSHBUG00000021128)	zgc:101851 (ENSHBUG00000021150)	dbi (ENSHBUG00000021164)	ENSHBUG00000021277
Lyretail cichlid	MODERN SPECIES	451	ENSNBRG00000016540	ENSNBRG00000016573	ENSNBRG00000016645	ENSNBRG00000016663	ENSNBRG00000016679	dbi (ENSNBRG00000016720)	zgc:101851 (ENSNBRG00000016736)	C1QL2 (ENSNBRG00000016751)	ENSNBRG00000016797	ENSNBRG00000016813	EN1 (ENSNBRG00000016827)	ENSNBRG00000016848	insig2 (ENSNBRG00000016869)	si:dkey-251i10.3 (ENSNBRG00000016950)	ccdc93 (ENSNBRG00000017130)	PDE9A (ENSNBRG00000017173) #22	ENSNBRG00000017182 #25	ENSNBRG00000017201
Nile tilapia	MODERN SPECIES	7	dnajb11 (ENSONIG00000013783)	tbccd1 (ENSONIG00000013786)	crygs1 (ENSONIG00000013790)	lcmt2 (ENSONIG00000013793)	rab5b (ENSONIG00000013796)	dbr1 (ENSONIG00000013801)	armc8 (ENSONIG00000013804)	ENSONIG00000013811	ENSONIG00000013821	ENSONIG00000013816	ENSONIG00000039173	UBXN4 (ENSONIG00000017402)	nmi (ENSONIG00000017404)	mmadhcb (ENSONIG00000017407)	slc37a1 (ENSONIG00000017408) #21	PDE9A (ENSONIG00000017410) #22	ENSONIG00000029745	wdr4 (ENSONIG00000017415) #24	ENSONIG00000029755	ENSONIG00000040783 #25	pknox1.1 (ENSONIG00000017418) #26	TMPRSS3 (ENSONIG00000017423) #18	ENSONIG00000038272	ccdc93 (ENSONIG00000017425)	si:dkey-251i10.3 (ENSONIG00000020563)	insig2 (ENSONIG00000017428)	ENSONIG00000035463	EN1 (ENSONIG00000017432)	ENSONIG00000036588	C1QL2 (ENSONIG00000017433)	zgc:101851 (ENSONIG00000029848)
Midas cichlid	MODERN SPECIES	1351										ENSACIG00000003509	ubxn4 (ENSACIG00000003578)	ENSACIG00000003587	ENSACIG00000003598	mmadhcb (ENSACIG00000003616)	slc37a1 (ENSACIG00000003635) #21	PDE9A (ENSACIG00000003713) #22	wdr4 (ENSACIG00000003750) #24	ENSACIG00000003774	ENSACIG00000003875 #25	pknox1.1 (ENSACIG00000003887) #26	ENSACIG00000003912 #18	ccdc93 (ENSACIG00000003942)	si:dkey-251i10.3 (ENSACIG00000004000)	insig2 (ENSACIG00000004028)
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	13	ENSMMDG00005014124	ENSMMDG00005014125	ENSMMDG00005014130	ENSMMDG00005014143	ENSMMDG00005014144	IL10RB (ENSMMDG00005014146)	ENSMMDG00005014151	ENSMMDG00005014154	TMEM50B (ENSMMDG00005014156)	TRIM8 (ENSMMDG00005014165)	ENSMMDG00005014195 #33	dcp2 (ENSMMDG00005014198)	zmat5 (ENSMMDG00005014200)	RSPH1 (ENSMMDG00005014202) #20	slc37a1 (ENSMMDG00005014287) #21	PDE9A (ENSMMDG00005017652) #22	wdr4 (ENSMMDG00005017727) #24	ENSMMDG00005017734	pknox1.1 (ENSMMDG00005017741) #26	ENSMMDG00005017746 #18	ENSMMDG00005017749	ccdc93 (ENSMMDG00005017767)	si:dkey-251i10.3 (ENSMMDG00005018343)	insig2 (ENSMMDG00005018351)	EN1 (ENSMMDG00005018359)	ENSMMDG00005018365	ENSMMDG00005018382	ENSMMDG00005018386	ENSMMDG00005018396	C1QL2 (ENSMMDG00005018409)	STEAP3 (ENSMMDG00005018429)
Pinecone sodierfish	MODERN SPECIES	6	samd8 (ENSMMDG00005009887)	si:ch211-223p8.8 (ENSMMDG00005009878)	ENSMMDG00005009875	dusp13a (ENSMMDG00005009787)	ENSMMDG00005009695	adka (ENSMMDG00005008039)	ap3m1 (ENSMMDG00005007989)	vcla (ENSMMDG00005005446)	plaua (ENSMMDG00005005373)	plaua (ENSMMDG00005005357)	ENSMMDG00005005339 #33	dcp2 (ENSMMDG00005005332)	zmat5 (ENSMMDG00005005329)	RSPH1 (ENSMMDG00005005321) #20	slc37a1 (ENSMMDG00005005287) #21	PDE9A (ENSMMDG00005003891) #22	wdr4 (ENSMMDG00005003851) #24	ENSMMDG00005003836	ENSMMDG00005002050	erlin1 (ENSMMDG00005001889)	spef1 (ENSMMDG00005001841)	adam8a (ENSMMDG00005001832)	znf511 (ENSMMDG00005001826)	msx3 (ENSMMDG00005001823)	ENSMMDG00005001822	fuom (ENSMMDG00005001818)	echs1 (ENSMMDG00005001808)	sprn (ENSMMDG00005001805)	mtg1 (ENSMMDG00005001787)	paox (ENSMMDG00005001778)	rassf4a (ENSMMDG00005001766)
Cod	MODERN SPECIES	12	man1a2 (ENSGMOG00000004751)	ENSGMOG00000023608	ENSGMOG00000008304	umps (ENSGMOG00000008301)	cryba2b (ENSGMOG00000026086)	fev (ENSGMOG00000023733)	ENSGMOG00000034858	wnt10a (ENSGMOG00000008295)	WNT6 (ENSGMOG00000033106)	ENSGMOG00000025637	ENSGMOG00000036274	ENSGMOG00000022561	ENSGMOG00000001953 #33	RSPH1 (ENSGMOG00000019274) #20	slc37a1 (ENSGMOG00000019504) #21	PDE9A (ENSGMOG00000018112) #22	wdr4 (ENSGMOG00000018145) #24	ENSGMOG00000034690	ENSGMOG00000032378	pknox1.1 (ENSGMOG00000018171) #26	ENSGMOG00000018189 #18	ENSGMOG00000036933	CCDC93 (ENSGMOG00000018223)	ENSGMOG00000026529	INSIG2 (ENSGMOG00000018264)	EN1 (ENSGMOG00000033160)	C1QL2 (ENSGMOG00000031902)	STEAP3 (ENSGMOG00000037245)	zgc:101851 (ENSGMOG00000001591)	dbi (ENSGMOG00000015488)	ENSGMOG00000001641
Protacanthopterygii	ANCESTRAL SPECIES	82	ENSGT00940000155868.f	ENSGT00730000111249	ENSGT00940000177543.e.a	ENSGT00940000177543.e.b	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k.e	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.b #18	ENSGT00940000158453.b	ENSGT00940000156894.d	ENSGT00940000165888	ENSGT00940000155219.hb.b	ENSGT00480000042679.b.a	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00940000153655.A.a.a	ENSGT00390000015682	ENSGT00940000155821.c.a	ENSGT00940000153904.a.g
Northern pike	MODERN SPECIES	19	ENSELUG00000015519	ENSELUG00000015614	ENSELUG00000015662	ENSELUG00000015693	ENSELUG00000015732	ENSELUG00000015757	ENSELUG00000015767	ENSELUG00000032443	ENSELUG00000015797	ifngr2 (ENSELUG00000001223)	TMEM50B (ENSELUG00000015826)	ENSELUG00000033956 #33	ENSELUG00000027789 #33	RSPH1 (ENSELUG00000015903) #20	slc37a1 (ENSELUG00000015958) #21	PDE9A (ENSELUG00000016088) #22	wdr4 (ENSELUG00000016049) #24	ENSELUG00000000605 #25	pknox1.1 (ENSELUG00000000609) #26	ENSELUG00000031220	PCDH17 (ENSELUG00000016194)	ENSELUG00000030429	pcdh8 (ENSELUG00000028309)	PCDH8 (ENSELUG00000016210)	cnmd (ENSELUG00000016233)	EDNRB (ENSELUG00000016244)	cog3 (ENSELUG00000016306)	MID1 (ENSELUG00000016370)	ARHGAP6 (ENSELUG00000016474)	FRMPD4 (ENSELUG00000016537)	TLR7 (ENSELUG00000016567)
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	6	ENSGT00730000111249.d	ENSGT00940000177543.e.b	ENSGT00390000016499.e	ENSGT00940000158231.l.c	ENSGT00940000178189	ENSGT00940000157314.B	ENSGT00940000158231.k.e.a	ENSGT00940000158406.u.b	ENSGT00940000158406.v	ENSGT00970000198121	ENSGT00940000158406.u.a	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821.g #33	ENSGT00940000159245.c.a #21	ENSGT00940000155587.a.b.g.a #22	ENSGT00390000008902.kb.b	ENSGT00390000012196.t.b #25	ENSGT00940000159505.u.b #26	ENSGT00940000158453.b.c	ENSGT00940000156894.d.a	ENSGT00940000165888.c	ENSGT00940000155219.hb.b.d	ENSGT00480000042679.b.a.e	ENSGT01100000263512.a.a.a.b.a.b.a.d	ENSGT00390000015682.k	ENSGT00940000155821.c.a.e	ENSGT00940000153904.a.g.c	ENSGT00950000183035.a.b.a.i	ENSGT00940000160879.l.b	ENSGT00940000154433
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00730000111249.c	ENSGT00940000177543.e.a.b	ENSGT00940000177543.e.b	ENSGT00390000016499.e	ENSGT00940000158231.l.c	ENSGT00940000157314.B	ENSGT00940000158231.k.e.a	ENSGT00940000158406.u.b	ENSGT00940000158406.v	ENSGT00970000198121	ENSGT00940000158406.u.a	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821.g #33	ENSGT00940000159245.c.a #21	ENSGT00940000155587.a.b.g.a #22	ENSGT00390000008902.kb.b	ENSGT00390000012196.t.b #25	ENSGT00940000159505.u.b #26	ENSGT00940000158453.b.c	ENSGT00940000156894.d.a	ENSGT00940000165888.c	ENSGT00940000155219.hb.b.d	ENSGT00480000042679.b.a.e	ENSGT01100000263512.a.a.a.b.a.b.a.d	ENSGT00390000015682.k	ENSGT00940000155821.c.a.e	ENSGT00940000153904.a.g.c	ENSGT00950000183035.a.b.a.i	ENSGT00940000160879.l.b	ENSGT00940000154433
Oncorhynchus	ANCESTRAL SPECIES	13	ENSGT00940000155868.f.d	ENSGT00730000111249.c	ENSGT00940000177543.e.a.b	ENSGT00940000177543.e.b	ENSGT00390000016499.e	ENSGT00940000158231.l.c	ENSGT00940000157314.B	ENSGT00940000158231.k.e.a	ENSGT00940000158406.u.b	ENSGT00940000158406.v	ENSGT00970000198121	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821.g #33	ENSGT00940000159245.c.a #21	ENSGT00940000155587.a.b.g.a #22	ENSGT00390000008902.kb.b	ENSGT00390000012196.t.b #25	ENSGT00940000159505.u.b #26	ENSGT00940000158453.b.c	ENSGT00940000156894.d.a	ENSGT00940000165888.c	ENSGT00940000155219.hb.b.d	ENSGT00480000042679.b.a.e	ENSGT01100000263512.a.a.a.b.a.b.a.d	ENSGT00390000015682.k	ENSGT00940000155821.c.a.e	ENSGT00940000153904.a.g.c	ENSGT00950000183035.a.b.a.i	ENSGT00940000160879.l.b	ENSGT00980000198599.b.b.a
Rainbow trout	MODERN SPECIES	14	ARGLU1 (ENSOMYG00000047777)	ENSOMYG00000047774	ENSOMYG00000047773	ENSOMYG00000047771	ENSOMYG00000048979	ENSOMYG00000047768	IL10RB (ENSOMYG00000047760)	ENSOMYG00000047764	crfb5 (ENSOMYG00000047755)	ENSOMYG00000047747	ENSOMYG00000047743	TMEM50B (ENSOMYG00000047741)	ENSOMYG00000056457	ENSOMYG00000061615	slc37a1 (ENSOMYG00000047725) #21	PDE9A (ENSOMYG00000047715) #22	ENSOMYG00000047713	ENSOMYG00000064692 #25	pknox1.1 (ENSOMYG00000047709) #26	ENSOMYG00000047702	ENSOMYG00000047701	pcdh8 (ENSOMYG00000047700)	ENSOMYG00000047698	cnmd (ENSOMYG00000047696)	ENSOMYG00000047690	cog3 (ENSOMYG00000047679)	ENSOMYG00000047669	ARHGAP6 (ENSOMYG00000047667)	ENSOMYG00000047655	ENSOMYG00000047644	ENSOMYG00000062809
Oncorhynchus_a	ANCESTRAL SPECIES	11	ENSGT00390000001083	ENSGT00940000155868.f.d	ENSGT00730000111249.c	ENSGT00940000177543.e.a.b	ENSGT00940000177543.e.b	ENSGT00390000016499.e	ENSGT00940000158231.l.c	ENSGT00940000157314.B	ENSGT00940000158406.u.b	ENSGT00940000158406.v	ENSGT00970000198121	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821.g #33	ENSGT00940000159245.c.a #21	ENSGT00940000155587.a.b.g.a #22	ENSGT00390000008902.kb.b	ENSGT00390000012196.t.b #25	ENSGT00940000159505.u.b #26	ENSGT00940000158453.b.c	ENSGT00940000156894.d.a	ENSGT00940000165888.c	ENSGT00940000155219.hb.b.d	ENSGT00480000042679.b.a.e	ENSGT00940000176176.b	ENSGT00390000015682.k	ENSGT00940000155821.c.a.e	ENSGT00940000153904.a.g.c	ENSGT00950000183035.a.b.a.i	ENSGT00940000160879.l.b	ENSGT00930000150973.A.c
Coho salmon	MODERN SPECIES	18	ENSOKIG00005015523	efnb2a (ENSOKIG00005015531)	ARGLU1 (ENSOKIG00005015570)	ENSOKIG00005015588	ENSOKIG00005015594	ENSOKIG00005015617	ENSOKIG00005015628	ENSOKIG00005015640	ENSOKIG00005015662	ENSOKIG00005015684	ENSOKIG00005015729	ENSOKIG00005015748	TMEM50B (ENSOKIG00005015757)	ENSOKIG00005015767 #33	slc37a1 (ENSOKIG00005015876) #21	PDE9A (ENSOKIG00005016655) #22	ENSOKIG00005016680	ENSOKIG00005016709 #25	pknox1.1 (ENSOKIG00005016722) #26	ENSOKIG00005016761	ENSOKIG00005016767	PCDH17 (ENSOKIG00005016769)	pcdh8 (ENSOKIG00005016777)	PCDH8 (ENSOKIG00005016783)	cnmd (ENSOKIG00005016792)	ENSOKIG00005016809	cog3 (ENSOKIG00005016893)	MID1 (ENSOKIG00005017222)	ARHGAP6 (ENSOKIG00005017317)	FRMPD4 (ENSOKIG00005017432)	TLR8 (ENSOKIG00005017676)
Chinook salmon	MODERN SPECIES	18	gtpbp8 (ENSOTSG00005047868)	ENSOTSG00005047870	ENSOTSG00005047871	efnb2a (ENSOTSG00005047872)	arglu1a (ENSOTSG00005047873)	ENSOTSG00005047875	ENSOTSG00005047876	ENSOTSG00005047877	ENSOTSG00005047878	ENSOTSG00005047882	il10rb (ENSOTSG00005047884)	ENSOTSG00005047886	ENSOTSG00005047887	TMEM50B (ENSOTSG00005018666)	slc37a1 (ENSOTSG00005018679) #21	PDE9A (ENSOTSG00005018685) #22	ENSOTSG00005018686	ENSOTSG00005018689 #25	pknox1.1 (ENSOTSG00005018691) #26	ENSOTSG00005018697	PCDH17 (ENSOTSG00005018699)	pcdh8 (ENSOTSG00005018701)	PCDH8 (ENSOTSG00005018702)	cnmd (ENSOTSG00005018703)	ENSOTSG00005018739	cog3 (ENSOTSG00005018756)	MID1 (ENSOTSG00005018993)	ARHGAP6 (ENSOTSG00005018996)	ENSOTSG00005019080	FRMPD4 (ENSOTSG00005019082)	TLR8 (ENSOTSG00005019105)
Salmo	ANCESTRAL SPECIES	10	ENSGT00390000001083	ENSGT00940000155868.f.d	ENSGT00730000111249.c	ENSGT00940000177543.e.a.b	ENSGT00940000177543.e.b	ENSGT00390000016499.e	ENSGT00940000158231.l.c	ENSGT00940000157314.B	ENSGT00940000158231.k.e.a	ENSGT00940000158406.u.b	ENSGT00940000158406.v	ENSGT00970000198121	ENSGT00940000155131	ENSGT00390000011821.g #33	ENSGT00940000159245.c.a #21	ENSGT00940000155587.a.b.g.a #22	ENSGT00390000008902.kb.b	ENSGT00390000012196.t.b #25	ENSGT00940000159505.u.b #26	ENSGT00940000158453.b.c	ENSGT00940000156894.d.a	ENSGT00940000165888.c	ENSGT00940000155219.hb.b.d	ENSGT00480000042679.b.a.e	ENSGT01100000263512.a.a.a.b.a.b.a.d	ENSGT00940000153655.A.a.b	ENSGT00390000015682.k	ENSGT00940000155821.c.a.e	ENSGT00940000153904.a.g.c	ENSGT00950000183035.a.b.a.i	ENSGT00940000160879.l.b
River trout	MODERN SPECIES	12	efnb2a (ENSSTUG00000011493)	ARGLU1 (ENSSTUG00000011486)	ENSSTUG00000011399	ENSSTUG00000011387	ENSSTUG00000011384	C21orf62 (ENSSTUG00000011378)	ENSSTUG00000011365	ENSSTUG00000011348	IL10RB (ENSSTUG00000011339)	ENSSTUG00000011329	ENSSTUG00000011297	ENSSTUG00000011275	TMEM50B (ENSSTUG00000011265)	ENSSTUG00000011249 #33	slc37a1 (ENSSTUG00000010871) #21	PDE9A (ENSSTUG00000010810) #22	ENSSTUG00000010788	ENSSTUG00000010773 #25	pknox1.1 (ENSSTUG00000010754) #26	ENSSTUG00000010733	PCDH17 (ENSSTUG00000010729)	pcdh8 (ENSSTUG00000010726)	PCDH8 (ENSSTUG00000010721)	cnmd (ENSSTUG00000010710)	EDNRB (ENSSTUG00000010675)	cog3 (ENSSTUG00000009138)	MID1 (ENSSTUG00000008921)	ENSSTUG00000008904	ARHGAP6 (ENSSTUG00000008737)	FRMPD4 (ENSSTUG00000008384)	TLR8 (ENSSTUG00000008367)
Atlantic salmon	MODERN SPECIES	13	gtpbp8 (ENSSSAG00000074736)	efnb2a (ENSSSAG00000111771)	ARGLU1 (ENSSSAG00000104605)	ENSSSAG00000109671	ENSSSAG00000103096	ENSSSAG00000104882	ENSSSAG00000074744	ENSSSAG00000074742	ENSSSAG00000074738	ENSSSAG00000074756	ENSSSAG00000074758	ifngr2a (ENSSSAG00000074762)	TMEM50B (ENSSSAG00000121716)	ENSSSAG00000074766 #33	slc37a1 (ENSSSAG00000074806) #21	ENSSSAG00000075783 #22	ENSSSAG00000075789	ATP5J (ENSSSAG00000075790)	ENSSSAG00000075792 #25	ENSSSAG00000075795 #26	ENSSSAG00000075804	ENSSSAG00000075806	pcdh8 (ENSSSAG00000075810)	ENSSSAG00000075811	cnmd (ENSSSAG00000119624)	ENSSSAG00000075815	ENSSSAG00000075818	cog3 (ENSSSAG00000075841)	ENSSSAG00000076404	ENSSSAG00000102923	ARHGAP6 (ENSSSAG00000076421)
Huchen	MODERN SPECIES	269											ENSHHUG00000007992	ENSHHUG00000007968	TMEM50B (ENSHHUG00000007956)	ENSHHUG00000007925 #33	slc37a1 (ENSHHUG00000007911) #21	PDE9A (ENSHHUG00000007873) #22	ENSHHUG00000007831	ENSHHUG00000007819 #25	pknox1.1 (ENSHHUG00000007787) #26	ENSHHUG00000007753	PCDH17 (ENSHHUG00000007745)	pcdh8 (ENSHHUG00000007740)	PCDH8 (ENSHHUG00000007730)	cnmd (ENSHHUG00000007713)	EDNRB (ENSHHUG00000007693)	cog3 (ENSHHUG00000007297)	MID1 (ENSHHUG00000007218)	ARHGAP6 (ENSHHUG00000007145)	ENSHHUG00000007140	ENSHHUG00000007134	ENSHHUG00000007125
Salmoninae	ANCESTRAL SPECIES	649							ENSGT00940000154641.C.b.g.a	ENSGT00940000154641.C.b.g.b	ENSGT00390000016499.f	ENSGT00940000158231.l.d	ENSGT00510000048978	ENSGT00940000158231.k.e.b	ENSGT00390000011821.h #33	ENSGT00940000157240 #20	ENSGT00940000159245.c.b #21	ENSGT00940000155587.a.b.g.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb.a	ENSGT00390000012196.t.a #25	ENSGT00940000159505.u.a #26
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000162722.d	ENSGT00910000144271.C.bb.b	ENSGT00910000144271.C.bb.a.b.b	ENSGT00950000182906.b.b.l	ENSGT00940000163874.d	ENSGT00940000154641.C.b.g.a	ENSGT00940000154641.C.b.g.b	ENSGT00390000016499.f	ENSGT00940000158231.l.d	ENSGT00510000048978	ENSGT00940000158231.k.e.b	ENSGT00940000177543.e.a.a	ENSGT00390000011821.h #33	ENSGT00940000157240 #20	ENSGT00940000159245.c.b #21	ENSGT00940000155587.a.b.g.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb.a	ENSGT00390000012196.t.a #25	ENSGT00940000159505.u.a #26	ENSGT00940000158453.b.d	ENSGT00940000156894.d.b	ENSGT00940000165888.d	ENSGT00940000155219.hb.b.c	ENSGT00480000042679.b.a.f	ENSGT01100000263512.a.a.a.b.a.b.a.c	ENSGT00940000153655.A.a.a	ENSGT00390000015682.l	ENSGT00940000155821.c.a.f	ENSGT00940000153904.a.g.d	ENSGT00950000183035.a.b.a.j
Salmo	ANCESTRAL SPECIES	15												ENSGT00940000177543.e.a.a	ENSGT00390000011821.h #33	ENSGT00940000157240 #20	ENSGT00940000159245.c.b #21	ENSGT00940000155587.a.b.g.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb.a	ENSGT00390000012196.t.a #25	ENSGT00940000159505.u.a #26	ENSGT00940000158453.b.d	ENSGT00940000156894.d.b	ENSGT00940000165888.d	ENSGT00940000155219.hb.b.c	ENSGT00480000042679.b.a.f	ENSGT01100000263512.a.a.a.b.a.b.a.c	ENSGT00940000153655.A.a.a	ENSGT00390000015682.l	ENSGT00940000155821.c.a.f	ENSGT00940000153904.a.g.d	ENSGT00950000183035.a.b.a.j
Atlantic salmon	MODERN SPECIES	17	ENSSSAG00000114069	ENSSSAG00000093658	ENSSSAG00000104653	I10R2 (ENSSSAG00000049854)	ENSSSAG00000049846	ENSSSAG00000050033	ENSSSAG00000049823	ifngr2b (ENSSSAG00000049809)	ENSSSAG00000049799	ENSSSAG00000075027	ENSSSAG00000031778	ENSSSAG00000049787 #33	RSPH1 (ENSSSAG00000092913) #20	slc37a1 (ENSSSAG00000045389) #21	ENSSSAG00000119053	PDE9A (ENSSSAG00000045010) #22	wdr4 (ENSSSAG00000044976) #24	ATP5J (ENSSSAG00000044933)	ndufv3 (ENSSSAG00000044913) #25	pknox1.1 (ENSSSAG00000044894) #26	ENSSSAG00000044870	ENSSSAG00000044866	ENSSSAG00000108702	pcdh8 (ENSSSAG00000044646)	ENSSSAG00000044620	ENSSSAG00000044393	cnmd (ENSSSAG00000044674)	ENSSSAG00000044770	ENSSSAG00000044657	cog3 (ENSSSAG00000086532)	ENSSSAG00000042734
River trout	MODERN SPECIES	16	C21orf62 (ENSSTUG00000017069)	ENSSTUG00000017040	ENSSTUG00000017016	ENSSTUG00000017014	ENSSTUG00000016992	il10rb (ENSSTUG00000016966)	ENSSTUG00000016943	il10rb (ENSSTUG00000016939)	ENSSTUG00000016924	ENSSTUG00000016913	ENSSTUG00000016899	ENSSTUG00000016892	ENSSTUG00000016880 #33	RSPH1 (ENSSTUG00000016869) #20	slc37a1 (ENSSTUG00000014606) #21	PDE9A (ENSSTUG00000014480) #22	wdr4 (ENSSTUG00000014466) #24	ENSSTUG00000014463	ENSSTUG00000014458	ENSSTUG00000014451 #25	pknox1.1 (ENSSTUG00000014416) #26	ENSSTUG00000014395	PCDH17 (ENSSTUG00000014387)	pcdh8 (ENSSTUG00000014361)	PCDH8 (ENSSTUG00000014355)	cnmd (ENSSTUG00000014308)	EDNRB (ENSSTUG00000014211)	ENSSTUG00000014188	cog3 (ENSSTUG00000014057)	ENSSTUG00000013911	ARHGAP6 (ENSSTUG00000013807)
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00940000164201.c.b.a.b.a.c	ENSGT00950000182906.b.b.l	ENSGT00940000163874.d	ENSGT00940000154641.C.b.g.a	ENSGT00940000154641.C.b.g.b	ENSGT00390000016499.f	ENSGT00940000158231.l.d	ENSGT00510000048978	ENSGT00940000158231.k.e.b	ENSGT00940000158406.u.a.d	ENSGT00940000158406.u.a.c	ENSGT00940000177543.e.a.a	ENSGT00390000011821.h #33	ENSGT00940000157240 #20	ENSGT00940000159245.c.b #21	ENSGT00940000155587.a.b.g.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb.a	ENSGT00390000012196.t.a #25	ENSGT00940000159505.u.a #26	ENSGT00940000158453.b.d	ENSGT00940000156894.d.b	ENSGT00940000165888.d	ENSGT00940000155219.hb.b.c	ENSGT00480000042679.b.a.f	ENSGT01100000263512.a.a.a.b.a.b.a.c	ENSGT00940000153655.A.a.a	ENSGT00390000015682.l	ENSGT00940000155821.c.a.f	ENSGT00940000153904.a.g.d	ENSGT00950000183035.a.b.a.j
Rainbow trout	MODERN SPECIES	21	ENSOMYG00000077204	ENSOMYG00000000469	ENSOMYG00000000451	ENSOMYG00000000422	ENSOMYG00000000414	ENSOMYG00000000398	ENSOMYG00000000385	ENSOMYG00000000357	ENSOMYG00000000288	ifngr2a (ENSOMYG00000000269)	ENSOMYG00000000231	ENSOMYG00000000178	ENSOMYG00000000152 #33	RSPH1 (ENSOMYG00000000106) #20	slc37a1 (ENSOMYG00000000056) #21	PDE9A (ENSOMYG00000000044) #22	wdr4 (ENSOMYG00000028812) #24	ENSOMYG00000028748	ENSOMYG00000028736 #25	pknox1.1 (ENSOMYG00000028712) #26	ENSOMYG00000028640	ENSOMYG00000028633	pcdh8 (ENSOMYG00000028618)	ENSOMYG00000028609	cnmd (ENSOMYG00000028591)	ENSOMYG00000028563	ENSOMYG00000028527	ENSOMYG00000028458	ENSOMYG00000070075	ARHGAP6 (ENSOMYG00000028408)	ENSOMYG00000028352
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00940000163874.d	ENSGT00940000155868.f.c	ENSGT00730000111249.d	ENSGT00940000154641.C.b.g.a	ENSGT00940000154641.C.b.g.b	ENSGT00390000016499.f	ENSGT00940000158231.l.d	ENSGT00510000048978	ENSGT00940000158231.k.e.b	ENSGT00940000158406.u.a.d	ENSGT00940000158406.u.a.c	ENSGT00940000177543.e.a.a	ENSGT00390000011821.h #33	ENSGT00940000157240 #20	ENSGT00940000159245.c.b #21	ENSGT00940000155587.a.b.g.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb.a	ENSGT00390000012196.t.a #25	ENSGT00940000159505.u.a #26	ENSGT00940000158453.b.d	ENSGT00940000156894.d.b	ENSGT00940000165888.d	ENSGT00940000155219.hb.b.c	ENSGT00480000042679.b.a.f	ENSGT01100000263512.a.a.a.b.a.b.a.c	ENSGT00940000153655.A.a.a	ENSGT00390000015682.l	ENSGT00940000155821.c.a.f	ENSGT00940000153904.a.g.d	ENSGT00950000183035.a.b.a.j
Coho salmon	MODERN SPECIES	11	ENSOKIG00005000041	ENSOKIG00005011382	C21orf62 (ENSOKIG00005011372)	ENSOKIG00005011369	ENSOKIG00005011360	ENSOKIG00005011339	ENSOKIG00005011336	ENSOKIG00005011289	ENSOKIG00005011251	TMEM50B (ENSOKIG00005011194)	ENSOKIG00005011181	ENSOKIG00005011162	ENSOKIG00005011147 #33	RSPH1 (ENSOKIG00005011131) #20	slc37a1 (ENSOKIG00005009098) #21	PDE9A (ENSOKIG00005008983) #22	wdr4 (ENSOKIG00005008954) #24	ENSOKIG00005008940	ENSOKIG00005008931 #25	pknox1.1 (ENSOKIG00005008916) #26	ENSOKIG00005008886	ENSOKIG00005008880	ENSOKIG00005008822	PCDH17 (ENSOKIG00005008817)	pcdh8 (ENSOKIG00005008810)	PCDH8 (ENSOKIG00005008805)	cnmd (ENSOKIG00005008736)	EDNRB (ENSOKIG00005008707)	ENSOKIG00005008696	cog3 (ENSOKIG00005008569)	ENSOKIG00005008378
Chinook salmon	MODERN SPECIES	22	MACROH2A1 (ENSOTSG00005034075)	ENSOTSG00005034073	ENSOTSG00005034072	ENSOTSG00005034071	ENSOTSG00005034070	ENSOTSG00005034069	ENSOTSG00005034067	ENSOTSG00005034065	ENSOTSG00005034063	ENSOTSG00005034061	ENSOTSG00005034059	ENSOTSG00005034058	ENSOTSG00005034057 #33	RSPH1 (ENSOTSG00005034050) #20	slc37a1 (ENSOTSG00005033302) #21	PDE9A (ENSOTSG00005033297) #22	wdr4 (ENSOTSG00005033296) #24	ENSOTSG00005033294	ENSOTSG00005033293 #25	pknox1.1 (ENSOTSG00005033276) #26	ENSOTSG00005033271	PCDH17 (ENSOTSG00005033270)	pcdh8 (ENSOTSG00005033265)	PCDH8 (ENSOTSG00005033264)	cnmd (ENSOTSG00005033261)	EDNRB (ENSOTSG00005032727)	cog3 (ENSOTSG00005032712)	MID1 (ENSOTSG00005032703)	ARHGAP6 (ENSOTSG00005032625)	ENSOTSG00005032623	gulp1a (ENSOTSG00005032617)
Huchen	MODERN SPECIES	2458													ENSHHUG00000049562 #33	RSPH1 (ENSHHUG00000049569) #20	slc37a1 (ENSHHUG00000049580) #21	PDE9A (ENSHHUG00000049604) #22	wdr4 (ENSHHUG00000049610) #24	ENSHHUG00000049614	ENSHHUG00000049641 #25	ENSHHUG00000049648	ENSHHUG00000049652 #26
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000155587.a.b.h #22
Huchen	MODERN SPECIES	11770																ENSHHUG00000019120 #22
Otomorpha	ANCESTRAL SPECIES	434												ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000003874.a.a #34
Clupeiformes	ANCESTRAL SPECIES	408											ENSGT00940000155131	ENSGT00390000011821 #33	ENSGT00940000157240 #20	ENSGT00940000159245 #21	ENSGT00950000183097.a.a.b	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00990000205068	ENSGT00940000175678	ENSGT00940000158589.b.a #18	ENSGT00390000003874.a.a #34
Denticle herring	MODERN SPECIES	282														RSPH1 (ENSDCDG00000010650) #20	slc37a1 (ENSDCDG00000010742) #21	PDE9A (ENSDCDG00000010793) #22	wdr4 (ENSDCDG00000010796) #24	ENSDCDG00000010800	ENSDCDG00000010804	ENSDCDG00000010807 #25	TMPRSS3 (ENSDCDG00000010810) #18	slc9a1b (ENSDCDG00000010841)	ENSDCDG00000011728	KDM1B (ENSDCDG00000011786)	ENSDCDG00000013631	selenoh (ENSDCDG00000013635)	ENSDCDG00000013643	ENSDCDG00000013648	PI4KB (ENSDCDG00000013657)	gabpb2a (ENSDCDG00000013673)	mllt11 (ENSDCDG00000013679)
Atlantic herring	MODERN SPECIES	11	ENSCHAG00000007735	ENSCHAG00000007728	ENSCHAG00000007716	cnot11 (ENSCHAG00000007676)	ENSCHAG00000007656	TBC1D8 (ENSCHAG00000007575)	ENSCHAG00000007535	PDCL3 (ENSCHAG00000007508)	ENSCHAG00000004621	ENSCHAG00000003969	ENSCHAG00000003871	ENSCHAG00000003840	ENSCHAG00000003813	ENSCHAG00000003744	ENSCHAG00000002146	ENSCHAG00000002107 #22	wdr4 (ENSCHAG00000002048) #24	ENSCHAG00000001997	ENSCHAG00000001973	ENSCHAG00000001936 #18	ENSCHAG00000001922	pdxka (ENSCHAG00000001811) #34	ENSCHAG00000001723	ENSCHAG00000001706	ENSCHAG00000001658	ENSCHAG00000001624	ENSCHAG00000001500	FAM124A (ENSCHAG00000001466)	serpine3 (ENSCHAG00000001410)	wdfy2 (ENSCHAG00000001113)	dhrs12 (ENSCHAG00000000887)
Otophysi	ANCESTRAL SPECIES	102															ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000003874.a.a #34	ENSGT00940000164822	ENSGT00940000180576	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b	ENSGT00940000161118	ENSGT00390000003024
Characiphysae	ANCESTRAL SPECIES	53	ENSGT00940000156702.a.a.b	ENSGT01040000240451.a.a.c	ENSGT00940000177166	ENSGT00940000163812	ENSGT00940000163418.A.b	ENSGT00390000011295.a.k	ENSGT00950000183038.a.b.b.b.q	ENSGT00940000159241.y	ENSGT00530000063734.a.e	ENSGT00940000158842	ENSGT00940000160160	ENSGT00940000161094	ENSGT00940000153988.A	ENSGT00940000155773.b	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000003874.a.a #34	ENSGT00940000164822	ENSGT00940000180576	ENSGT00940000157784.c.c	ENSGT00940000156556.g.a	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b	ENSGT00940000161118	ENSGT00390000003024
Channel catfish	MODERN SPECIES	25	SPEGNB (ENSIPUG00000005973)	ENSIPUG00000005963	ENSIPUG00000005834	fam126b (ENSIPUG00000005770)	nr4a2 (ENSIPUG00000005726)	ENSIPUG00000005714	ENSIPUG00000005708	cytip (ENSIPUG00000005690)	ACVR1C (ENSIPUG00000005626)	acvr1 (ENSIPUG00000005574)	upp2 (ENSIPUG00000005549)	CCDC148 (ENSIPUG00000005520)	ENSIPUG00000005504	ENSIPUG00000005441	slc37a1 (ENSIPUG00000005380) #21	pde9a (ENSIPUG00000005305) #22	wdr4 (ENSIPUG00000005271) #24	ENSIPUG00000005232	ndufv3 (ENSIPUG00000005221) #25	pknox1 (ENSIPUG00000005187) #26	TMPRSS3 (ENSIPUG00000005164) #18	ENSIPUG00000005144	pdxka (ENSIPUG00000005025) #34	ecrg4a (ENSIPUG00000005010)	ENSIPUG00000004998	nck2a (ENSIPUG00000004971)	FHL2 (ENSIPUG00000004931)	c6h2orf49 (ENSIPUG00000004923)	GPR45 (ENSIPUG00000004915)	pou3f3a (ENSIPUG00000004910)	tmem182 (ENSIPUG00000004908)
Characiphysae_b	ANCESTRAL SPECIES	88	ENSGT01040000240451.a.a.c	ENSGT00940000163812	ENSGT00940000177166	ENSGT00940000163418.A.b	ENSGT00390000011295.a.k	ENSGT00950000183038.a.b.b.b.q	ENSGT00940000159241.y	ENSGT00940000181100	ENSGT00530000063734.a.e	ENSGT00940000158842	ENSGT00940000160160	ENSGT00940000161094	ENSGT00940000153988.A	ENSGT00940000155773.b	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000003874.a.a #34	ENSGT00940000164822	ENSGT00940000180576	ENSGT00940000157784.c.c	ENSGT00940000156556.g.a	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b	ENSGT00940000161118	ENSGT00390000003024
Electric eel	MODERN SPECIES	866														PKP4 (ENSEEEG00000011635)	slc37a1 (ENSEEEG00000011547) #21	PDE9A (ENSEEEG00000011536) #22	wdr4 (ENSEEEG00000011527) #24	ENSEEEG00000011523	ENSEEEG00000011522 #25	pknox1.1 (ENSEEEG00000011423) #26	TMPRSS3 (ENSEEEG00000011417) #18	ENSEEEG00000011415	pdxka (ENSEEEG00000011414) #34
Characoidei	ANCESTRAL SPECIES	43	ENSGT01040000240451.a.a.c	ENSGT00940000177166	ENSGT00940000163812	ENSGT00940000163418.A.b	ENSGT00390000011295.a.k	ENSGT00950000183038.a.b.b.b.q	ENSGT00940000159241.y	ENSGT00940000181100	ENSGT00530000063734.a.e	ENSGT00940000158842	ENSGT00940000160160	ENSGT00940000161094	ENSGT00940000153988.A	ENSGT00940000155773.b	ENSGT00940000159245 #21	ENSGT00940000155587.a.b #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00940000173884	ENSGT00390000003874.a.a #34	ENSGT00940000164822	ENSGT00940000180576	ENSGT00940000157784.c.c	ENSGT00940000156556.g.a	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b	ENSGT00940000161118	ENSGT00390000003024
Red-bellied piranha	MODERN SPECIES	19	ENSPNAG00000005458	ENSPNAG00000015332	SPEGNB (ENSPNAG00000015352)	ENSPNAG00000015388	HYCC2 (ENSPNAG00000015492)	nr4a2a (ENSPNAG00000015547)	GALNT5 (ENSPNAG00000015565)	ENSPNAG00000015578	CYTIP (ENSPNAG00000015587)	ACVR1C (ENSPNAG00000015614)	ACVR1 (ENSPNAG00000015639)	upp2 (ENSPNAG00000015675)	ENSPNAG00000015701	PKP4 (ENSPNAG00000015737)	slc37a1 (ENSPNAG00000015760) #21	PDE9A (ENSPNAG00000015778) #22	wdr4 (ENSPNAG00000015788) #24	ENSPNAG00000015798	ENSPNAG00000015808 #25	pknox1.1 (ENSPNAG00000015852) #26	TMPRSS3 (ENSPNAG00000015980) #18	ENSPNAG00000016005	pdxka (ENSPNAG00000016074) #34	ENSPNAG00000016099	ENSPNAG00000016128
Mexicana tetra	MODERN SPECIES	10	SPEGNB (ENSAMXG00000003568)	ENSAMXG00000003587	HYCC2 (ENSAMXG00000003628)	ENSAMXG00000041824	nr4a2a (ENSAMXG00000010880)	ENSAMXG00000035175	ENSAMXG00000041655	ENSAMXG00000042256	CYTIP (ENSAMXG00000033755)	ACVR1C (ENSAMXG00000010841)	ACVR1 (ENSAMXG00000010830)	upp2 (ENSAMXG00000040182)	ENSAMXG00000036304	PKP4 (ENSAMXG00000010785)	slc37a1 (ENSAMXG00000035502) #21	PDE9A (ENSAMXG00000008265) #22	wdr4 (ENSAMXG00000008345) #24	si:ch211-140m22.7 (ENSAMXG00000030141)	ENSAMXG00000037187	pknox1.1 (ENSAMXG00000032866) #26	TMPRSS3 (ENSAMXG00000008759) #18	ENSAMXG00000008772	pdxka (ENSAMXG00000035376) #34	ENSAMXG00000036479	ENSAMXG00000038986	ENSAMXG00000043277	fstl1b (ENSAMXG00000012534)	LRRC58 (ENSAMXG00000030089)	GPR156 (ENSAMXG00000040468)	gsk3ba (ENSAMXG00000008836)	CFAP91 (ENSAMXG00000008880)
Cyprinoidei	DUPLICATION
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000155587.a.b.i #22
Cyprininae	ANCESTRAL SPECIES	278	ENSGT00940000159907.f.a.a.a	ENSGT00390000006788.a.b.d	ENSGT00390000000693	ENSGT00940000162467.b	ENSGT00940000159144.B	ENSGT00940000159552.a.a.b	ENSGT00390000016051.b	ENSGT00940000159552.a.b	ENSGT00530000063353.a.b.b.b	ENSGT00530000063353.a.b.b.a.b	ENSGT00950000182832.B.bb.a	ENSGT00940000158913.b	ENSGT01010000222287.B.b.a.a.a.a	ENSGT00390000016088	ENSGT00940000159245.b #21	ENSGT00940000155587.a.b.i #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb.l.b.a	ENSGT00390000012196.r.b #25	ENSGT00940000159505.a.a #26	ENSGT00940000158589.b.a #18	ENSGT00940000159245.a.b #21	ENSGT00940000155587.a.b.j.a #22	ENSGT00390000008902.kb.k	ENSGT00390000012196.r.a #25	ENSGT00940000159505.a.b #26	ENSGT00940000158449.ub	ENSGT00390000003874.a.a #34	ENSGT00940000164822.a.a.a.a
Cyprininae_a	ANCESTRAL SPECIES	126	ENSGT00940000159907.f.b	ENSGT00940000159907.f.a.a.a	ENSGT00390000006788.a.b.d	ENSGT00390000000693.e	ENSGT00940000162467.b	ENSGT00940000159144.B	ENSGT00390000016051.b	ENSGT00940000159552.a.b	ENSGT00530000063353.a.b.b.b	ENSGT00530000063353.a.b.b.a.b	ENSGT00950000182832.B.bb.a	ENSGT00940000158913.b	ENSGT01010000222287.B.b.a.a.a.a.b	ENSGT00390000016088.a	ENSGT00940000159245.b #21	ENSGT00940000155587.a.b.i #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb.l.b.a	ENSGT00390000012196.r.b #25	ENSGT00940000159505.a.a #26	ENSGT00940000158589.b.a #18	ENSGT00940000159245.a.b #21	ENSGT00940000155587.a.b.j.a #22	ENSGT00390000008902.kb.k	ENSGT00390000012196.r.a #25	ENSGT00940000159505.a.b #26	ENSGT00940000158449.ub	ENSGT00390000003874.a.a #34	ENSGT00940000164822.a.a.a.a	ENSGT00940000157784.c.c.b	ENSGT00940000156556.g.d
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	3319																ENSSGRG00000006608 #22
Golden-line barbel	MODERN SPECIES	438				LACC1 (ENSSGRG00000055278)	ENSSGRG00000055279	ENSSGRG00000055280	ENSSGRG00000055281	ENSSGRG00000055282	gtf2f2b (ENSSGRG00000055284)	VGLL3 (ENSSGRG00000055286)	chmp2ba (ENSSGRG00000055287)	pou1f1 (ENSSGRG00000055288)	HTR1F (ENSSGRG00000055289)	zgc:152951 (ENSSGRG00000055290)	slc37a1 (ENSSGRG00000055291) #21	PDE9A (ENSSGRG00000055292) #22	wdr4 (ENSSGRG00000055293) #24	si:ch211-140m22.7 (ENSSGRG00000055294)	ENSSGRG00000055295 #25	pknox1.1 (ENSSGRG00000055296) #26	TMPRSS3 (ENSSGRG00000055297) #18	pdxka (ENSSGRG00000055298) #34	ENSSGRG00000055299	fstl1b (ENSSGRG00000055300)	LRRC58 (ENSSGRG00000055302)	GPR156 (ENSSGRG00000055303)	gsk3ba (ENSSGRG00000055304)	nr1i2 (ENSSGRG00000055324)	ENSSGRG00000055327	CFAP91 (ENSSGRG00000055329)	zgc:113337 (ENSSGRG00000055333)
Cyprinoidei	DUPLICATION
Cyprinoidei	ANCESTRAL SPECIES	105	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00390000013820	ENSGT00940000159907.f.a	ENSGT00390000006788.a.b	ENSGT00390000000693	ENSGT00940000162467.b	ENSGT00940000159144.B	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00530000063353.a.b.b	ENSGT00940000158913	ENSGT01010000222287.B.b.a.a.a.a	ENSGT00390000016088	ENSGT00940000159245 #21	ENSGT00940000155587.a.b.j.a #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb	ENSGT00390000012196 #25	ENSGT00940000159505 #26	ENSGT00940000158589.b.a #18	ENSGT00390000003874.a.a #34	ENSGT00940000164822.a.a
Cyprininae	ANCESTRAL SPECIES	278	ENSGT00940000159552.a.b	ENSGT00530000063353.a.b.b.b	ENSGT00530000063353.a.b.b.a.b	ENSGT00950000182832.B.bb.a	ENSGT00940000158913.b	ENSGT01010000222287.B.b.a.a.a.a	ENSGT00390000016088	ENSGT00940000159245.b #21	ENSGT00940000155587.a.b.i #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb.l.b.a	ENSGT00390000012196.r.b #25	ENSGT00940000159505.a.a #26	ENSGT00940000158589.b.a #18	ENSGT00940000159245.a.b #21	ENSGT00940000155587.a.b.j.a #22	ENSGT00390000008902.kb.k	ENSGT00390000012196.r.a #25	ENSGT00940000159505.a.b #26	ENSGT00940000158449.ub	ENSGT00390000003874.a.a #34	ENSGT00940000164822.a.a.a.a
Cyprininae_a	ANCESTRAL SPECIES	126	ENSGT00940000159552.a.b	ENSGT00530000063353.a.b.b.b	ENSGT00530000063353.a.b.b.a.b	ENSGT00950000182832.B.bb.a	ENSGT00940000158913.b	ENSGT01010000222287.B.b.a.a.a.a.b	ENSGT00390000016088.a	ENSGT00940000159245.b #21	ENSGT00940000155587.a.b.i #22	ENSGT00390000012174 #24	ENSGT00390000008902.kb.l.b.a	ENSGT00390000012196.r.b #25	ENSGT00940000159505.a.a #26	ENSGT00940000158589.b.a #18	ENSGT00940000159245.a.b #21	ENSGT00940000155587.a.b.j.a #22	ENSGT00390000008902.kb.k	ENSGT00390000012196.r.a #25	ENSGT00940000159505.a.b #26	ENSGT00940000158449.ub	ENSGT00390000003874.a.a #34	ENSGT00940000164822.a.a.a.a	ENSGT00940000157784.c.c.b	ENSGT00940000156556.g.d	ENSGT00940000159755.d	ENSGT00520000055635.c.a.a.b.a.a	ENSGT00940000161118.a	ENSGT00390000003024.e	ENSGT00940000164706.b.b	ENSGT00990000205148.b	ENSGT00940000164822.b.a
Common carp reference	DUPLICATION
Common carp reference	MODERN SPECIES	46	ENSCCRG00000064166	EPSTI1 (ENSCCRG00000059683)	dnajc15 (ENSCCRG00000013996)	ENOX1 (ENSCCRG00000077641)	LACC1 (ENSCCRG00000010679)	ENSCCRG00000077757	TSC22D1 (ENSCCRG00000071540)	gtf2f2b (ENSCCRG00000031622)	kctd4 (ENSCCRG00000028690)	VGLL3 (ENSCCRG00000066964)	chmp2ba (ENSCCRG00000065793)	pou1f1 (ENSCCRG00000035812)	ENSCCRG00000068041	zgc:152951 (ENSCCRG00000070710)	slc37a1 (ENSCCRG00000029961) #21	PDE9A (ENSCCRG00000081104) #22	wdr4 (ENSCCRG00000013352) #24	ENSCCRG00000066442 #25	pknox1.1 (ENSCCRG00000012518) #26	ENSCCRG00000064264 #18	ENSCCRG00000076756	ENSCCRG00000066355	fstl1b (ENSCCRG00000012980)	LRRC58 (ENSCCRG00000012946)	GPR156 (ENSCCRG00000072911)	gsk3ba (ENSCCRG00000013021)	nr1i2 (ENSCCRG00000019902)	CFAP91 (ENSCCRG00000014006)	ENSCCRG00000079885	zgc:113337 (ENSCCRG00000014013)	ENSCCRG00000014016
Common carp reference	MODERN SPECIES	41	AKAP11 (ENSCCRG00000081257)	ENSCCRG00000058336	EPSTI1 (ENSCCRG00000025918)	ENSCCRG00000057631	dnajc15 (ENSCCRG00000053130)	ENOX1 (ENSCCRG00000010682)	LACC1 (ENSCCRG00000014228)	tsc22d1 (ENSCCRG00000060056)	ENSCCRG00000031696	VGLL3 (ENSCCRG00000066397)	CHMP2B (ENSCCRG00000030823)	pou1f1 (ENSCCRG00000030833)	HTR1F (ENSCCRG00000081290)	zgc:152951 (ENSCCRG00000039883)	slc37a1 (ENSCCRG00000039910) #21	ENSCCRG00000036714 #22	ENSCCRG00000067867	ENSCCRG00000057455 #25	pknox1.1 (ENSCCRG00000062286) #26	ENSCCRG00000025428	pdxka (ENSCCRG00000052496) #34	ENSCCRG00000059868	ENSCCRG00000024936	ENSCCRG00000054992	ENSCCRG00000065648	fstl1b (ENSCCRG00000012961)	LRRC58 (ENSCCRG00000065277)	GPR156 (ENSCCRG00000013961)	gsk3ba (ENSCCRG00000019917)	nr1i2 (ENSCCRG00000051427)	CFAP91 (ENSCCRG00000051428)
Goldfish	MODERN SPECIES	49	chmp2ba (ENSCARG00000021575)	pou1f1 (ENSCARG00000021560)	ENSCARG00000021556	STX12 (ENSCARG00000021541)	popdc3 (ENSCARG00000021527)	bves (ENSCARG00000021513)	ENSCARG00000021496	ENSCARG00000021435	ENSCARG00000021425	ENSCARG00000021423	ENSCARG00000021411	ENSCARG00000021407	sim1a (ENSCARG00000021395)	GRIK2 (ENSCARG00000021172)	slc37a1 (ENSCARG00000019288) #21	PDE9A (ENSCARG00000019083) #22	wdr4 (ENSCARG00000019056) #24	si:ch211-140m22.7 (ENSCARG00000019045)	ENSCARG00000019042 #25	pknox1.1 (ENSCARG00000018864) #26	TMPRSS3 (ENSCARG00000018845) #18	ENSCARG00000018841	ENSCARG00000018833	fstl1b (ENSCARG00000018319)	LRRC58 (ENSCARG00000018307)	ENSCARG00000018295	GPR156 (ENSCARG00000018292)	ENSCARG00000018287	ENSCARG00000018284	gsk3ba (ENSCARG00000016594)	nr1i2 (ENSCARG00000016459)
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000155587.a.b.j.b #22
Cyprininae	ANCESTRAL SPECIES	1349															ENSGT00940000159245.a.a #21	ENSGT00940000155587.a.b.j.b #22
Goldfish	MODERN SPECIES	27	ENSCARG00000066290	EPSTI1 (ENSCARG00000066297)	dnajc15 (ENSCARG00000005930)	ENOX1 (ENSCARG00000005964)	LACC1 (ENSCARG00000006141)	serp2 (ENSCARG00000006150)	ENSCARG00000006168	TSC22D1 (ENSCARG00000006193)	kctd4 (ENSCARG00000006200)	ENSCARG00000006206	pou1f1 (ENSCARG00000006227)	zgc:152951 (ENSCARG00000006327)	ENSCARG00000006346	ENSCARG00000006360	slc37a1 (ENSCARG00000006585) #21	PDE9A (ENSCARG00000009934) #22	ENSCARG00000009957 #25	pknox1.1 (ENSCARG00000009960) #26	ENSCARG00000009973	pdxka (ENSCARG00000010006) #34	ENSCARG00000010738	ENSCARG00000010751	ENSCARG00000012524	stk24a (ENSCARG00000012603)	INO80D (ENSCARG00000012618)	CMKLR2 (ENSCARG00000012624)	prkra (ENSCARG00000012627)	OSBPL6 (ENSCARG00000012684)	rbm45 (ENSCARG00000014904)	ENSCARG00000014950	ENSCARG00000014999
Zebrafish	MODERN SPECIES	24	serp2 (ENSDARG00000094003)	tsc22d1 (ENSDARG00000038306)	gtf2f2b (ENSDARG00000006816)	kctd4 (ENSDARG00000068691)	ENSDARG00000092033	VGLL3 (ENSDARG00000038305)	chmp2ba (ENSDARG00000068683)	ENSDARG00000112067	crfb2 (ENSDARG00000040332)	crfb1 (ENSDARG00000068681)	pou1f1 (ENSDARG00000058924)	ENSDARG00000109862	ENSDARG00000115053	zgc:152951 (ENSDARG00000068663)	slc37a1 (ENSDARG00000086103) #21	PDE9A (ENSDARG00000060280) #22	wdr4 (ENSDARG00000090581) #24	si:ch211-140m22.7 (ENSDARG00000077967)	ENSDARG00000090389 #25	pknox1.1 (ENSDARG00000018765) #26	ENSDARG00000053315 #18	ENSDARG00000078625	pdxka (ENSDARG00000088959) #34	ENSDARG00000093349	igsf3 (ENSDARG00000077002)	ENSDARG00000069934	ENSDARG00000078643	TRIM45 (ENSDARG00000076781)	man1a2 (ENSDARG00000041728)	tent5c (ENSDARG00000010437)	gdap2 (ENSDARG00000021569)
Spotted gar	MODERN SPECIES	655	ENSLOCG00000004258	ENSLOCG00000004243	C21orf62 (ENSLOCG00000017776)	ENSLOCG00000004223	ENSLOCG00000004207	ENSLOCG00000004194	IL10RB (ENSLOCG00000004177)	ENSLOCG00000004158	ENSLOCG00000004142	ENSLOCG00000004132	TMEM50B (ENSLOCG00000004113)	ENSLOCG00000004103	ENSLOCG00000004064 #33	RSPH1 (ENSLOCG00000004034) #20	slc37a1 (ENSLOCG00000003987) #21	PDE9A (ENSLOCG00000003918) #22	wdr4 (ENSLOCG00000003903) #24	ENSLOCG00000003890 #25	pknox1.1 (ENSLOCG00000003857) #26	ENSLOCG00000003832 #18	ENSLOCG00000003820	pdxka (ENSLOCG00000003790) #34	agpat3 (ENSLOCG00000003758) #37	TRAPPC10 (ENSLOCG00000003708)	pwp2h (ENSLOCG00000003663)	mbnl2 (ENSLOCG00000003634)	rap2ab (ENSLOCG00000003615)	ENSLOCG00000003595	kpnb3 (ENSLOCG00000003556)	FARP1 (ENSLOCG00000003520)	stk24b (ENSLOCG00000003474)
Elephant shark	MODERN SPECIES	1595	robo2 (ENSCMIG00000018396)	ROBO1 (ENSCMIG00000018180)	gatd3 (ENSCMIG00000018055)	cadm2a (ENSCMIG00000018019)	GBE1 (ENSCMIG00000017987)	pwp2h (ENSCMIG00000017979)	agpat3 (ENSCMIG00000017972) #37	TRAPPC10 (ENSCMIG00000017905)	ENSCMIG00000017877	pdxka (ENSCMIG00000017870) #34	ENSCMIG00000017863	RRP1 (ENSCMIG00000017860) #33	RSPH1 (ENSCMIG00000017856) #20	slc37a1 (ENSCMIG00000017837) #21	ENSCMIG00000017832	ENSCMIG00000017830 #22	WDR4 (ENSCMIG00000017823) #24	appb (ENSCMIG00000017578)	ADAMTS1 (ENSCMIG00000017460)	ADAMTS5 (ENSCMIG00000017456)	ENSCMIG00000017444 #18	abcg1 (ENSCMIG00000017429) #13	ENSCMIG00000017422	urb1 (ENSCMIG00000017401)	N6AMT1 (ENSCMIG00000017379)	ENSCMIG00000017378