Euteleostomi	ANCESTRAL SPECIES	318						ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000164095	ENSGT00940000159672	ENSGT00940000161756	ENSGT00940000158698	ENSGT00530000063555.B	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24
Sarcopterygii	ANCESTRAL SPECIES	72										ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000154078.a.b	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00950000182850.a.b.b #22	ENSGT00950000183067.a.b.b	ENSGT00940000159040	ENSGT00940000158754	ENSGT00720000108851	ENSGT00940000161953	ENSGT00390000015483	ENSGT00940000158766	ENSGT00390000006729	ENSGT00940000153232.a.a	ENSGT00940000158418	ENSGT00940000157814	ENSGT00940000155535	ENSGT00950000183192.b	ENSGT00940000155642	ENSGT00940000156651
Tetrapoda	ANCESTRAL SPECIES	124									ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161674 #26	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00530000063672.b	ENSGT00950000182882.B	ENSGT00940000160355
Amniota	ANCESTRAL SPECIES	33	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00530000063672.b
Mammalia	ANCESTRAL SPECIES	27	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Theria	ANCESTRAL SPECIES	38	ENSGT00390000001491.a	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00940000156591	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Eutheria	ANCESTRAL SPECIES	2	ENSGT00390000001491.a	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00940000156591	ENSGT00390000012054.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00680000101436	ENSGT00940000156591	ENSGT00390000012054.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34
Euarchontoglires	ANCESTRAL SPECIES	24	ENSGT00390000012054.b	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34
Euarchontoglires_A	ANCESTRAL SPECIES	25	ENSGT00390000012054.b	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Glires	ANCESTRAL SPECIES	26	ENSGT00390000012054.b	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Rodentia	ANCESTRAL SPECIES	21	ENSGT00390000012054.b	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Rodentia_B	ANCESTRAL SPECIES	24	ENSGT00390000012054.b	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Myomorpha	ANCESTRAL SPECIES	29	ENSGT00390000012054.b	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Muroidea	ANCESTRAL SPECIES	26	ENSGT00390000012054.b.ob	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00390000010170.a.b #7	ENSGT00390000003338 #8	ENSGT00390000012063 #9	ENSGT00950000183115.b.a #10	ENSGT01040000240444.A.a.a.a.a #12	ENSGT00950000183202.b #11	ENSGT00940000158925 #13	ENSGT01100000263536.B.c.a #14	ENSGT00940000159319 #15	ENSGT00740000115687 #16	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00390000010170.a.b #7	ENSGT00390000003338 #8	ENSGT00390000012063 #9	ENSGT00950000183115.b.a #10	ENSGT01040000240444.A.a.a.a.a #12	ENSGT00950000183202.b #11	ENSGT00940000158925 #13	ENSGT01100000263536.B.c.a #14	ENSGT00940000159319 #15	ENSGT00740000115687 #16	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Cricetinae	ANCESTRAL SPECIES	18	ENSGT00390000010170.a.b #7	ENSGT00390000003338 #8	ENSGT00390000012063 #9	ENSGT00950000183115.b.a #10	ENSGT00950000183202.b #11	ENSGT01040000240444.A.a.a.a.a #12	ENSGT00940000158925 #13	ENSGT01100000263536.B.c.a #14	ENSGT00940000159319 #15	ENSGT00740000115687 #16	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Golden Hamster	MODERN SPECIES	642	Sucla2 (ENSMAUG00000008374) #7	Nudt15 (ENSMAUG00000018405) #8	Med4 (ENSMAUG00000021269) #9	Itm2b (ENSMAUG00000017281) #10	Rb1 (ENSMAUG00000020865) #11	Lpar6 (ENSMAUG00000006841) #12	Rcbtb2 (ENSMAUG00000013502) #13	ENSMAUG00000008735 #14	Fndc3a (ENSMAUG00000011429) #15	Gm9195 (ENSMAUG00000017114) #16	Gfra2 (ENSMAUG00000003686) #17	Dok2 (ENSMAUG00000020434) #18	Xpo7 (ENSMAUG00000000727) #19	Npm2 (ENSMAUG00000004228) #20	Fgf17 (ENSMAUG00000014970) #21	Dmtn (ENSMAUG00000007804) #22	Fhip2b (ENSMAUG00000019012) #23	Nudt18 (ENSMAUG00000010693) #24	Hr (ENSMAUG00000018799) #25	Reep4 (ENSMAUG00000008766) #26	Lgi3 (ENSMAUG00000003562) #27	Sftpc (ENSMAUG00000013512) #28	Bmp1 (ENSMAUG00000000896) #29	Phyhip (ENSMAUG00000021601) #30	Polr3d (ENSMAUG00000006844) #31	Piwil2 (ENSMAUG00000003138) #32	Slc39a14 (ENSMAUG00000018755) #33	Ppp3cc (ENSMAUG00000000668) #34	Sorbs3 (ENSMAUG00000021963) #35	Pdlim2 (ENSMAUG00000019610) #36	9930012K11Rik (ENSMAUG00000021973) #37
Chinese hamster chok1gshd	MODERN SPECIES	3	SUCLA2 (ENSCGRG00001009190) #7	Nudt15 (ENSCGRG00001001521) #8	Med4 (ENSCGRG00001018208) #9	Itm2b (ENSCGRG00001015807) #10	Lpar6 (ENSCGRG00001011474) #12	Rb1 (ENSCGRG00001022172) #11	Rcbtb2 (ENSCGRG00001016446) #13	ENSCGRG00001010401 #14	Fndc3a (ENSCGRG00001020347) #15	Gm9195 (ENSCGRG00001003097) #16	Gfra2 (ENSCGRG00001022337) #17	Dok2 (ENSCGRG00001020098) #18	Xpo7 (ENSCGRG00001005783) #19	Npm2 (ENSCGRG00001002208) #20	Fgf17 (ENSCGRG00001022053) #21	Dmtn (ENSCGRG00001022357) #22	Fhip2b (ENSCGRG00001011801) #23	Nudt18 (ENSCGRG00001004686) #24	Hr (ENSCGRG00001014790) #25	Reep4 (ENSCGRG00001006811) #26	Lgi3 (ENSCGRG00001018802) #27	Sftpc (ENSCGRG00001016044) #28	Bmp1 (ENSCGRG00001011754) #29	Phyhip (ENSCGRG00001017258) #30	Polr3d (ENSCGRG00001010339) #31	Piwil2 (ENSCGRG00001013004) #32	Slc39a14 (ENSCGRG00001020763) #33	Ppp3cc (ENSCGRG00001021761) #34	Sorbs3 (ENSCGRG00001019180) #35	Pdlim2 (ENSCGRG00001018717) #36	9930012K11Rik (ENSCGRG00001022180) #37
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00390000010170.a.b #7	ENSGT00390000003338 #8	ENSGT00390000012063 #9	ENSGT00950000183115.b.a #10	ENSGT01040000240444.A.a.a.a.a #12	ENSGT00950000183202.b #11	ENSGT00940000158925 #13	ENSGT01100000263536.B.c.a #14	ENSGT00940000159319 #15	ENSGT00740000115687 #16	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Prairie vole	MODERN SPECIES	4	ENSMOCG00000011477 #7	Nudt15 (ENSMOCG00000003875) #8	Med4 (ENSMOCG00000002608) #9	Itm2b (ENSMOCG00000021655) #10	Lpar6 (ENSMOCG00000007205) #12	Rb1 (ENSMOCG00000010218) #11	Rcbtb2 (ENSMOCG00000018787) #13	ENSMOCG00000007313 #14	Fndc3a (ENSMOCG00000018330) #15	Gm9195 (ENSMOCG00000022806) #16	Gfra2 (ENSMOCG00000014649) #17	Dok2 (ENSMOCG00000019946) #18	Xpo7 (ENSMOCG00000002336) #19	Npm2 (ENSMOCG00000017251) #20	Fgf17 (ENSMOCG00000016452) #21	Dmtn (ENSMOCG00000021436) #22	Fhip2b (ENSMOCG00000008531) #23	Nudt18 (ENSMOCG00000007739) #24	Hr (ENSMOCG00000000216) #25	Reep4 (ENSMOCG00000022325) #26	Lgi3 (ENSMOCG00000021903) #27	Sftpc (ENSMOCG00000010064) #28	Bmp1 (ENSMOCG00000008585) #29	Phyhip (ENSMOCG00000007599) #30	Polr3d (ENSMOCG00000005195) #31	Piwil2 (ENSMOCG00000003446) #32	Slc39a14 (ENSMOCG00000006559) #33	Ppp3cc (ENSMOCG00000018622) #34	Sorbs3 (ENSMOCG00000008784) #35	Pdlim2 (ENSMOCG00000020649) #36	9930012K11Rik (ENSMOCG00000019565) #37
Northern American deer mouse	MODERN SPECIES	22	Nudt15 (ENSPEMG00000013922) #8	Med4 (ENSPEMG00000000371) #9	Itm2b (ENSPEMG00000020178) #10	ENSPEMG00000029678	Lpar6 (ENSPEMG00000012942) #12	Rb1 (ENSPEMG00000020245) #11	ENSPEMG00000006635 #13	ENSPEMG00000031384 #14	Fndc3a (ENSPEMG00000021668) #15	Gm9195 (ENSPEMG00000008194) #16	Gfra2 (ENSPEMG00000009994) #17	Dok2 (ENSPEMG00000023202) #18	Xpo7 (ENSPEMG00000007759) #19	Npm2 (ENSPEMG00000013368) #20	Fgf17 (ENSPEMG00000030845) #21	Dmtn (ENSPEMG00000010274) #22	Fhip2b (ENSPEMG00000022531) #23	Nudt18 (ENSPEMG00000014423) #24	Hr (ENSPEMG00000016906) #25	Reep4 (ENSPEMG00000023573) #26	Lgi3 (ENSPEMG00000021332) #27	Sftpc (ENSPEMG00000022130) #28	Bmp1 (ENSPEMG00000022496) #29	Phyhip (ENSPEMG00000031322) #30	Polr3d (ENSPEMG00000023314) #31	Piwil2 (ENSPEMG00000021798) #32	Ppp3cc (ENSPEMG00000015904) #34	Sorbs3 (ENSPEMG00000019062) #35	Pdlim2 (ENSPEMG00000011746) #36	9930012K11Rik (ENSPEMG00000016741) #37	Ccar2 (ENSPEMG00000009116)
Murinae	ANCESTRAL SPECIES	16	ENSGT00390000010170.a.b #7	ENSGT00390000003338 #8	ENSGT00390000012063 #9	ENSGT00950000183115.b.a #10	ENSGT01040000240444.A.a.a.a.a #12	ENSGT00950000183202.b #11	ENSGT00940000158925 #13	ENSGT00990000203619.B	ENSGT00940000159319 #15	ENSGT00740000115687 #16	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Mus	ANCESTRAL SPECIES	8	ENSGT00390000010170.a.b #7	ENSGT00390000003338 #8	ENSGT00390000012063 #9	ENSGT00950000183115.b.a #10	ENSGT01040000240444.A.a.a.a.a #12	ENSGT00950000183202.b #11	ENSGT00940000158925 #13	ENSGT00990000203619.B	ENSGT00940000159319 #15	ENSGT00740000115687 #16	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Mus_A	ANCESTRAL SPECIES	12	ENSGT00390000010170.a.b #7	ENSGT00390000003338 #8	ENSGT00390000012063 #9	ENSGT00950000183115.b.a #10	ENSGT01040000240444.A.a.a.a.a #12	ENSGT00950000183202.b #11	ENSGT00940000158925 #13	ENSGT00990000203619.B	ENSGT00940000159319 #15	ENSGT00740000115687 #16	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Mus_B	ANCESTRAL SPECIES	11	ENSGT00390000010170.a.b #7	ENSGT00390000003338 #8	ENSGT00390000012063 #9	ENSGT00950000183115.b.a #10	ENSGT01040000240444.A.a.a.a.a #12	ENSGT00950000183202.b #11	ENSGT00940000158925 #13	ENSGT00990000203619.B	ENSGT00940000159319 #15	ENSGT00740000115687 #16	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Mouse	MODERN SPECIES	5	Sucla2 (ENSMUSG00000022110) #7	Nudt15 (ENSMUSG00000033405) #8	Med4 (ENSMUSG00000022109) #9	Itm2b (ENSMUSG00000022108) #10	Lpar6 (ENSMUSG00000033446) #12	Rb1 (ENSMUSG00000022105) #11	Rcbtb2 (ENSMUSG00000022106) #13	Cysltr2 (ENSMUSG00000033470)	Fndc3a (ENSMUSG00000033487) #15	Gm9195 (ENSMUSG00000109446) #16	Gfra2 (ENSMUSG00000022103) #17	Dok2 (ENSMUSG00000022102) #18	Xpo7 (ENSMUSG00000022100) #19	Npm2 (ENSMUSG00000047911) #20	Fgf17 (ENSMUSG00000022101) #21	Dmtn (ENSMUSG00000022099) #22	Fhip2b (ENSMUSG00000022095) #23	Nudt18 (ENSMUSG00000045211) #24	Hr (ENSMUSG00000022096) #25	Reep4 (ENSMUSG00000033589) #26	Lgi3 (ENSMUSG00000033595) #27	Sftpc (ENSMUSG00000022097) #28	Bmp1 (ENSMUSG00000022098) #29	Phyhip (ENSMUSG00000003469) #30	Polr3d (ENSMUSG00000000776) #31	Piwil2 (ENSMUSG00000033644) #32	Slc39a14 (ENSMUSG00000022094) #33	Ppp3cc (ENSMUSG00000022092) #34	Sorbs3 (ENSMUSG00000022091) #35	Pdlim2 (ENSMUSG00000022090) #36	9930012K11Rik (ENSMUSG00000044551) #37
Mus_C	ANCESTRAL SPECIES	20	ENSGT00390000010170.a.b #7	ENSGT00390000003338 #8	ENSGT00390000012063 #9	ENSGT00950000183115.b.a #10	ENSGT01040000240444.A.a.a.a.a #12	ENSGT00950000183202.b #11	ENSGT00940000158925 #13	ENSGT00990000203619.B	ENSGT00940000159319 #15	ENSGT00740000115687 #16	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Steppe mouse	MODERN SPECIES	3225						Cysltr2 (ENSMSIG00000031090)	Fndc3a (ENSMSIG00000031095) #15	Gm9195 (ENSMSIG00000031103) #16	ENSMSIG00000031119	Gfra2 (ENSMSIG00000031121) #17	Dok2 (ENSMSIG00000031124) #18	Xpo7 (ENSMSIG00000031126) #19	ENSMSIG00000031135	Npm2 (ENSMSIG00000031136) #20	Fgf17 (ENSMSIG00000031138) #21	Dmtn (ENSMSIG00000031142) #22	Fhip2b (ENSMSIG00000031168) #23	Nudt18 (ENSMSIG00000031175) #24	Hr (ENSMSIG00000031176) #25	ENSMSIG00000031180 #26	Lgi3 (ENSMSIG00000031184) #27	Sftpc (ENSMSIG00000031189) #28
spretus	MODERN SPECIES	5	MGP_SPRETEiJ_G0020397 #8	Med4 (MGP_SPRETEiJ_G0020396) #9	Itm2b (MGP_SPRETEiJ_G0020395) #10	Lpar6 (MGP_SPRETEiJ_G0020394) #12	Rb1 (MGP_SPRETEiJ_G0020393) #11	Rcbtb2 (MGP_SPRETEiJ_G0020392) #13	Cysltr2 (MGP_SPRETEiJ_G0020391)	MGP_SPRETEiJ_G0020390	MGP_SPRETEiJ_G0020389	Fndc3a (MGP_SPRETEiJ_G0020388) #15	Gfra2 (MGP_SPRETEiJ_G0020387) #17	Dok2 (MGP_SPRETEiJ_G0020386) #18	Xpo7 (MGP_SPRETEiJ_G0020385) #19	Npm2 (MGP_SPRETEiJ_G0020384) #20	Fgf17 (MGP_SPRETEiJ_G0020383) #21	Dmtn (MGP_SPRETEiJ_G0020382) #22	Fhip2b (MGP_SPRETEiJ_G0020381) #23	Nudt18 (MGP_SPRETEiJ_G0020380) #24	Hr (MGP_SPRETEiJ_G0020379) #25	Reep4 (MGP_SPRETEiJ_G0020378) #26	Lgi3 (MGP_SPRETEiJ_G0020377) #27	Sftpc (MGP_SPRETEiJ_G0020376) #28	Bmp1 (MGP_SPRETEiJ_G0020375) #29	Phyhip (MGP_SPRETEiJ_G0020374) #30	Polr3d (MGP_SPRETEiJ_G0020373) #31	Piwil2 (MGP_SPRETEiJ_G0020372) #32	Slc39a14 (MGP_SPRETEiJ_G0020371) #33	Ppp3cc (MGP_SPRETEiJ_G0020370) #34	Sorbs3 (MGP_SPRETEiJ_G0020369) #35	Pdlim2 (MGP_SPRETEiJ_G0020368) #36	9930012K11Rik (MGP_SPRETEiJ_G0020367) #37
Ryukyu mouse	MODERN SPECIES	5	Htr2a (MGP_CAROLIEiJ_G0019505)	Sucla2 (MGP_CAROLIEiJ_G0019504) #7	Nudt15 (MGP_CAROLIEiJ_G0019503) #8	Med4 (MGP_CAROLIEiJ_G0019502) #9	Itm2b (MGP_CAROLIEiJ_G0019501) #10	Lpar6 (MGP_CAROLIEiJ_G0019500) #12	Rb1 (MGP_CAROLIEiJ_G0019499) #11	Rcbtb2 (MGP_CAROLIEiJ_G0019498) #13	Cysltr2 (MGP_CAROLIEiJ_G0019497)	Fndc3a (MGP_CAROLIEiJ_G0019496) #15	Gfra2 (MGP_CAROLIEiJ_G0019495) #17	Dok2 (MGP_CAROLIEiJ_G0019494) #18	Xpo7 (MGP_CAROLIEiJ_G0019493) #19	Npm2 (MGP_CAROLIEiJ_G0019492) #20	Fgf17 (MGP_CAROLIEiJ_G0019491) #21	Dmtn (MGP_CAROLIEiJ_G0019490) #22	Fhip2b (MGP_CAROLIEiJ_G0019489) #23	Nudt18 (MGP_CAROLIEiJ_G0019488) #24	Hr (MGP_CAROLIEiJ_G0019487) #25	Reep4 (MGP_CAROLIEiJ_G0019486) #26	Lgi3 (MGP_CAROLIEiJ_G0019485) #27	Sftpc (MGP_CAROLIEiJ_G0019484) #28	Bmp1 (MGP_CAROLIEiJ_G0019483) #29	Phyhip (MGP_CAROLIEiJ_G0019482) #30	Polr3d (MGP_CAROLIEiJ_G0019481) #31	Piwil2 (MGP_CAROLIEiJ_G0019480) #32	Slc39a14 (MGP_CAROLIEiJ_G0019479) #33	Ppp3cc (MGP_CAROLIEiJ_G0019478) #34	Sorbs3 (MGP_CAROLIEiJ_G0019477) #35	Pdlim2 (MGP_CAROLIEiJ_G0019476) #36	9930012K11Rik (MGP_CAROLIEiJ_G0019475) #37
Shrew mouse	MODERN SPECIES	21	Sucla2 (MGP_PahariEiJ_G0030522) #7	MGP_PahariEiJ_G0030521 #8	MGP_PahariEiJ_G0030520 #8	Med4 (MGP_PahariEiJ_G0030519) #9	Itm2b (MGP_PahariEiJ_G0030518) #10	Lpar6 (MGP_PahariEiJ_G0030517) #12	Rb1 (MGP_PahariEiJ_G0030516) #11	Rcbtb2 (MGP_PahariEiJ_G0030515) #13	Cysltr2 (MGP_PahariEiJ_G0030514)	Fndc3a (MGP_PahariEiJ_G0030513) #15	Gfra2 (MGP_PahariEiJ_G0030512) #17	Dok2 (MGP_PahariEiJ_G0030511) #18	Xpo7 (MGP_PahariEiJ_G0030510) #19	Npm2 (MGP_PahariEiJ_G0030509) #20	Fgf17 (MGP_PahariEiJ_G0030508) #21	Dmtn (MGP_PahariEiJ_G0030507) #22	Fhip2b (MGP_PahariEiJ_G0030506) #23	Nudt18 (MGP_PahariEiJ_G0030505) #24	Hr (MGP_PahariEiJ_G0030504) #25	Reep4 (MGP_PahariEiJ_G0030503) #26	Lgi3 (MGP_PahariEiJ_G0030502) #27	Sftpc (MGP_PahariEiJ_G0030501) #28	Bmp1 (MGP_PahariEiJ_G0030500) #29	Phyhip (MGP_PahariEiJ_G0030499) #30	Polr3d (MGP_PahariEiJ_G0030498) #31	Piwil2 (MGP_PahariEiJ_G0030497) #32	Slc39a14 (MGP_PahariEiJ_G0030496) #33	Ppp3cc (MGP_PahariEiJ_G0030495) #34	Sorbs3 (MGP_PahariEiJ_G0030494) #35	Pdlim2 (MGP_PahariEiJ_G0030493) #36	9930012K11Rik (MGP_PahariEiJ_G0030492) #37
Rat	MODERN SPECIES	6	Lpar6 (ENSRNOG00000015577) #12	Rb1 (ENSRNOG00000016029) #11	Rcbtb2 (ENSRNOG00000015054) #13	ENSRNOG00000067330	Cysltr2 (ENSRNOG00000067464)	Fndc3a (ENSRNOG00000014478) #15	Gm9195 (ENSRNOG00000064068) #16	Ndufb2 (ENSRNOG00000026616)	Dpm3 (ENSRNOG00000029077)	ENSRNOG00000065077	Gfra2 (ENSRNOG00000014010) #17	Dok2 (ENSRNOG00000013922) #18	Xpo7 (ENSRNOG00000013288) #19	Npm2 (ENSRNOG00000025638) #20	Fgf17 (ENSRNOG00000012912) #21	Dmtn (ENSRNOG00000012273) #22	Fhip2b (ENSRNOG00000012014) #23	Nudt18 (ENSRNOG00000011831) #24	Hr (ENSRNOG00000011427) #25	Reep4 (ENSRNOG00000011373) #26	Lgi3 (ENSRNOG00000011323) #27	Sftpc (ENSRNOG00000011177) #28	Bmp1 (ENSRNOG00000010890) #29	Phyhip (ENSRNOG00000010555) #30	Polr3d (ENSRNOG00000010028) #31	Piwil2 (ENSRNOG00000009871) #32	Slc39a14 (ENSRNOG00000009832) #33	Ppp3cc (ENSRNOG00000009745) #34	Sorbs3 (ENSRNOG00000008829) #35	Pdlim2 (ENSRNOG00000008543) #36	C15h8orf58 (ENSRNOG00000008351) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	487				Sh2d4a (ENSNGAG00000006839)	Csgalnact1 (ENSNGAG00000012969)	Ints10 (ENSNGAG00000021756)	Lpl (ENSNGAG00000022867)	Slc18a1 (ENSNGAG00000014813)	Atp6v1b2 (ENSNGAG00000022586)	Lzts1 (ENSNGAG00000014557)	Gfra2 (ENSNGAG00000022669) #17	Dok2 (ENSNGAG00000010269) #18	Xpo7 (ENSNGAG00000015565) #19	Npm2 (ENSNGAG00000022056) #20	Fgf17 (ENSNGAG00000022264) #21	Dmtn (ENSNGAG00000000753) #22	Fhip2b (ENSNGAG00000004341) #23	Nudt18 (ENSNGAG00000009752) #24	Hr (ENSNGAG00000011133) #25	Reep4 (ENSNGAG00000013623) #26	Lgi3 (ENSNGAG00000014366) #27	Sftpc (ENSNGAG00000016974) #28	Bmp1 (ENSNGAG00000014134) #29	Phyhip (ENSNGAG00000012944) #30	Polr3d (ENSNGAG00000013872) #31	Piwil2 (ENSNGAG00000015408) #32	Slc39a14 (ENSNGAG00000018684) #33	Ppp3cc (ENSNGAG00000013527) #34	Sorbs3 (ENSNGAG00000015206) #35	Pdlim2 (ENSNGAG00000007929) #36	9930012K11Rik (ENSNGAG00000010379) #37
Lesser Egyptian jerboa	MODERN SPECIES	175	ENSJJAG00000003908	ENSJJAG00000003186	Sh2d4a (ENSJJAG00000000762)	Csgalnact1 (ENSJJAG00000000445)	ENSJJAG00000000254	Lpl (ENSJJAG00000000185)	Slc18a1 (ENSJJAG00000021529)	Atp6v1b2 (ENSJJAG00000021082)	Lzts1 (ENSJJAG00000020779)	ENSJJAG00000020613	Gfra2 (ENSJJAG00000020584) #17	ENSJJAG00000020434 #18	Xpo7 (ENSJJAG00000019391) #19	Npm2 (ENSJJAG00000018214) #20	Fgf17 (ENSJJAG00000017972) #21	Dmtn (ENSJJAG00000017477) #22	Fhip2b (ENSJJAG00000016855) #23	Nudt18 (ENSJJAG00000013459) #24	Hr (ENSJJAG00000012325) #25	Reep4 (ENSJJAG00000011531) #26	Lgi3 (ENSJJAG00000011324) #27	Sftpc (ENSJJAG00000010997) #28	Bmp1 (ENSJJAG00000009986) #29	Phyhip (ENSJJAG00000007411) #30	Polr3d (ENSJJAG00000006743) #31	Piwil2 (ENSJJAG00000005065) #32	Slc39a14 (ENSJJAG00000001303) #33
Kangaroo rat	MODERN SPECIES	506											Gfra2 (ENSDORG00000007215) #17	Dok2 (ENSDORG00000025791) #18	Xpo7 (ENSDORG00000006392) #19	Npm2 (ENSDORG00000012371) #20	Fgf17 (ENSDORG00000012368) #21	Dmtn (ENSDORG00000011886) #22	Fhip2b (ENSDORG00000011891) #23	Hr (ENSDORG00000011896) #25	Reep4 (ENSDORG00000011899) #26	Lgi3 (ENSDORG00000024991) #27	Sftpc (ENSDORG00000011167) #28	Bmp1 (ENSDORG00000011170) #29	Phyhip (ENSDORG00000011173) #30	Polr3d (ENSDORG00000011174) #31	Piwil2 (ENSDORG00000011177) #32	Slc39a14 (ENSDORG00000002085) #33	Ppp3cc (ENSDORG00000002086) #34	Sorbs3 (ENSDORG00000002089) #35	ENSDORG00000002868 #36	9930012K11Rik (ENSDORG00000000932) #37	Ccar2 (ENSDORG00000000934)
Rodentia_A	ANCESTRAL SPECIES	21	ENSGT00390000012054.b	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Sciuridae	ANCESTRAL SPECIES	29	ENSGT00390000012054.b	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Marmotini	ANCESTRAL SPECIES	30	ENSGT00390000012054.b.jb	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986.j #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Marmotini_b	ANCESTRAL SPECIES	87	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00390000014557.p	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986.j #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Squirrel	MODERN SPECIES	155	PSD3 (ENSSTOG00000000985)	ENSSTOG00000020963	SH2D4A (ENSSTOG00000022701)	CSGALNACT1 (ENSSTOG00000025203)	INTS10 (ENSSTOG00000001464)	LPL (ENSSTOG00000001477)	ENSSTOG00000033131	SLC18A1 (ENSSTOG00000011464)	ATP6V1B2 (ENSSTOG00000022596)	LZTS1 (ENSSTOG00000025467)	GFRA2 (ENSSTOG00000026519) #17	DOK2 (ENSSTOG00000021120) #18	XPO7 (ENSSTOG00000013611) #19	NPM2 (ENSSTOG00000013623) #20	FGF17 (ENSSTOG00000013628) #21	DMTN (ENSSTOG00000027524) #22	FHIP2B (ENSSTOG00000015235) #23	NUDT18 (ENSSTOG00000029142) #24	HR (ENSSTOG00000016512) #25	REEP4 (ENSSTOG00000016513) #26	LGI3 (ENSSTOG00000016514) #27	SFTPC (ENSSTOG00000016515) #28	BMP1 (ENSSTOG00000016516) #29	PHYHIP (ENSSTOG00000016517) #30	POLR3D (ENSSTOG00000016519) #31	PIWIL2 (ENSSTOG00000016520) #32	ENSSTOG00000030172 #33	PPP3CC (ENSSTOG00000028936) #34	SORBS3 (ENSSTOG00000011660) #35	PDLIM2 (ENSSTOG00000024161) #36	C8orf58 (ENSSTOG00000021866) #37
Arctic ground squirrel	MODERN SPECIES	186								SLC18A1 (ENSUPAG00010018578)	ATP6V1B2 (ENSUPAG00010018554)	LZTS1 (ENSUPAG00010018548)	GFRA2 (ENSUPAG00010018514) #17	DOK2 (ENSUPAG00010018499) #18	XPO7 (ENSUPAG00010018440) #19	NPM2 (ENSUPAG00010018414) #20	FGF17 (ENSUPAG00010018399) #21	DMTN (ENSUPAG00010017971) #22	FHIP2B (ENSUPAG00010017910) #23	NUDT18 (ENSUPAG00010017905) #24	ENSUPAG00010017898	HR (ENSUPAG00010017864) #25	REEP4 (ENSUPAG00010017856) #26	LGI3 (ENSUPAG00010017847) #27	SFTPC (ENSUPAG00010017841) #28	BMP1 (ENSUPAG00010017803) #29	PHYHIP (ENSUPAG00010017796) #30	POLR3D (ENSUPAG00010017779) #31	PIWIL2 (ENSUPAG00010017766) #32	SLC39A14 (ENSUPAG00010017726) #33	PPP3CC (ENSUPAG00010017686) #34	SORBS3 (ENSUPAG00010017635) #35	PDLIM2 (ENSUPAG00010017621) #36
Alpin marmot	MODERN SPECIES	61	ENSMMMG00000018320	ENSMMMG00000018272	ENSMMMG00000018256	SH2D4A (ENSMMMG00000018235)	CSGALNACT1 (ENSMMMG00000018218)	INTS10 (ENSMMMG00000018091)	LPL (ENSMMMG00000018057)	SLC18A1 (ENSMMMG00000018050)	ATP6V1B2 (ENSMMMG00000018032)	LZTS1 (ENSMMMG00000018023)	GFRA2 (ENSMMMG00000018003) #17	DOK2 (ENSMMMG00000017998) #18	XPO7 (ENSMMMG00000017808) #19	NPM2 (ENSMMMG00000017801) #20	FGF17 (ENSMMMG00000017798) #21	DMTN (ENSMMMG00000017508) #22	FHIP2B (ENSMMMG00000017499) #23	ENSMMMG00000017497	NUDT18 (ENSMMMG00000017482) #24	HR (ENSMMMG00000017436) #25	REEP4 (ENSMMMG00000017428) #26	LGI3 (ENSMMMG00000017411) #27	SFTPC (ENSMMMG00000017400) #28	BMP1 (ENSMMMG00000016498) #29	PHYHIP (ENSMMMG00000016482) #30	POLR3D (ENSMMMG00000016471) #31	PIWIL2 (ENSMMMG00000016458) #32	ENSMMMG00000016424 #33	PPP3CC (ENSMMMG00000014284) #34	SORBS3 (ENSMMMG00000014188) #35	PDLIM2 (ENSMMMG00000014169) #36
Eurasian red squirrel	MODERN SPECIES	14	PSD3 (ENSSVLG00005006930)	ENSSVLG00005006863	ENSSVLG00005006854	SH2D4A (ENSSVLG00005006765)	CSGALNACT1 (ENSSVLG00005006697)	INTS10 (ENSSVLG00005006649)	LPL (ENSSVLG00005006464)	SLC18A1 (ENSSVLG00005006162)	ATP6V1B2 (ENSSVLG00005006065)	LZTS1 (ENSSVLG00005005986)	GFRA2 (ENSSVLG00005005872) #17	DOK2 (ENSSVLG00005005819) #18	XPO7 (ENSSVLG00005005524) #19	NPM2 (ENSSVLG00005005355) #20	FGF17 (ENSSVLG00005005293) #21	DMTN (ENSSVLG00005005156) #22	FHIP2B (ENSSVLG00005005055) #23	NUDT18 (ENSSVLG00005005035) #24	HR (ENSSVLG00005005002) #25	REEP4 (ENSSVLG00005004964) #26	LGI3 (ENSSVLG00005004897) #27	SFTPC (ENSSVLG00005004845) #28	BMP1 (ENSSVLG00005004715) #29	PHYHIP (ENSSVLG00005004677) #30	POLR3D (ENSSVLG00005004650) #31	PIWIL2 (ENSSVLG00005004539) #32	SLC39A14 (ENSSVLG00005004424) #33	ENSSVLG00005004276 #34	SORBS3 (ENSSVLG00005004211) #35	PDLIM2 (ENSSVLG00005004159) #36	C8orf58 (ENSSVLG00005004115) #37
Hystricomorpha	ANCESTRAL SPECIES	21	ENSGT00390000012054.b.ib	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Naked mole-rat female	MODERN SPECIES	25	ENSHGLG00000039432	ENSHGLG00000005452	ENSHGLG00000010280	SH2D4A (ENSHGLG00000017844)	CSGALNACT1 (ENSHGLG00000016296)	INTS10 (ENSHGLG00000015823)	LPL (ENSHGLG00000005162)	SLC18A1 (ENSHGLG00000007001)	ATP6V1B2 (ENSHGLG00000007965)	ENSHGLG00000048578	GFRA2 (ENSHGLG00000015954) #17	DOK2 (ENSHGLG00000015292) #18	XPO7 (ENSHGLG00000008763) #19	NPM2 (ENSHGLG00000006243) #20	FGF17 (ENSHGLG00000007312) #21	DMTN (ENSHGLG00000007946) #22	FHIP2B (ENSHGLG00000012251) #23	NUDT18 (ENSHGLG00000009076) #24	HR (ENSHGLG00000013891) #25	REEP4 (ENSHGLG00000016443) #26	LGI3 (ENSHGLG00000032024) #27	SFTPC (ENSHGLG00000013617) #28	BMP1 (ENSHGLG00000013962) #29	PHYHIP (ENSHGLG00000043593) #30	POLR3D (ENSHGLG00000015415) #31	PIWIL2 (ENSHGLG00000015853) #32	SLC39A14 (ENSHGLG00000009516) #33	PPP3CC (ENSHGLG00000010001) #34	SORBS3 (ENSHGLG00000014875) #35	PDLIM2 (ENSHGLG00000007806) #36	ENSHGLG00000010238 #37
Hystricomorpha_a	ANCESTRAL SPECIES	20	ENSGT00390000012054.b.hb.a	ENSGT00390000012054.b.hb.b	ENSGT00940000156591	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Guinea pig	MODERN SPECIES	1	PSD3 (ENSCPOG00000002659)	ENSCPOG00000037424	SH2D4A (ENSCPOG00000005255)	ENSCPOG00000030817	CSGALNACT1 (ENSCPOG00000005259)	INTS10 (ENSCPOG00000011817)	LPL (ENSCPOG00000004054)	SLC18A1 (ENSCPOG00000001743)	ATP6V1B2 (ENSCPOG00000001749)	LZTS1 (ENSCPOG00000034547)	GFRA2 (ENSCPOG00000027454) #17	DOK2 (ENSCPOG00000001726) #18	XPO7 (ENSCPOG00000004506) #19	NPM2 (ENSCPOG00000039799) #20	FGF17 (ENSCPOG00000014655) #21	DMTN (ENSCPOG00000006214) #22	FHIP2B (ENSCPOG00000003287) #23	NUDT18 (ENSCPOG00000030205) #24	HR (ENSCPOG00000003292) #25	REEP4 (ENSCPOG00000003298) #26	LGI3 (ENSCPOG00000037841) #27	SFTPC (ENSCPOG00000021731) #28	BMP1 (ENSCPOG00000019973) #29	PHYHIP (ENSCPOG00000037333) #30	POLR3D (ENSCPOG00000003679) #31	PIWIL2 (ENSCPOG00000001108) #32	SLC39A14 (ENSCPOG00000001112) #33	PPP3CC (ENSCPOG00000001113) #34	SORBS3 (ENSCPOG00000001115) #35	ENSCPOG00000020871 #36	C8orf58 (ENSCPOG00000039428) #37
Hystricomorpha_b	ANCESTRAL SPECIES	30	ENSGT00390000012054.b.hb.a	ENSGT00390000012054.b.hb.b	ENSGT00940000156591	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Degu	MODERN SPECIES	77	ENSODEG00000019170	ENSODEG00000005985	ENSODEG00000006062	SH2D4A (ENSODEG00000006278)	CSGALNACT1 (ENSODEG00000005728)	INTS10 (ENSODEG00000006587)	LPL (ENSODEG00000006165)	SLC18A1 (ENSODEG00000005261)	ENSODEG00000005521	LZTS1 (ENSODEG00000007484)	GFRA2 (ENSODEG00000005386) #17	ENSODEG00000005626 #18	XPO7 (ENSODEG00000007208) #19	NPM2 (ENSODEG00000006433) #20	FGF17 (ENSODEG00000005311) #21	DMTN (ENSODEG00000005818) #22	FHIP2B (ENSODEG00000008184) #23	NUDT18 (ENSODEG00000007621) #24	HR (ENSODEG00000005767) #25	REEP4 (ENSODEG00000006662) #26	LGI3 (ENSODEG00000006726) #27	SFTPC (ENSODEG00000007026) #28	BMP1 (ENSODEG00000007288) #29	PHYHIP (ENSODEG00000006421) #30	POLR3D (ENSODEG00000005884) #31	PIWIL2 (ENSODEG00000009752) #32	ENSODEG00000019353	SLC39A14 (ENSODEG00000006438) #33	PPP3CC (ENSODEG00000006004) #34	SORBS3 (ENSODEG00000007179) #35	PDLIM2 (ENSODEG00000006028) #36
Long-tailed chinchilla	MODERN SPECIES	110	ENSCLAG00000013815	PSD3 (ENSCLAG00000013610)	ENSCLAG00000013492	SH2D4A (ENSCLAG00000014633)	CSGALNACT1 (ENSCLAG00000015214)	INTS10 (ENSCLAG00000012932)	LPL (ENSCLAG00000014046)	SLC18A1 (ENSCLAG00000014695)	ATP6V1B2 (ENSCLAG00000014575)	LZTS1 (ENSCLAG00000015813)	GFRA2 (ENSCLAG00000013860) #17	DOK2 (ENSCLAG00000013076) #18	XPO7 (ENSCLAG00000012121) #19	NPM2 (ENSCLAG00000013600) #20	FGF17 (ENSCLAG00000014705) #21	DMTN (ENSCLAG00000015647) #22	FHIP2B (ENSCLAG00000017275) #23	ENSCLAG00000012239 #24	HR (ENSCLAG00000013490) #25	REEP4 (ENSCLAG00000013685) #26	LGI3 (ENSCLAG00000014697) #27	SFTPC (ENSCLAG00000017002) #28	BMP1 (ENSCLAG00000015290) #29	PHYHIP (ENSCLAG00000014506) #30	POLR3D (ENSCLAG00000014993) #31	PIWIL2 (ENSCLAG00000013810) #32	SLC39A14 (ENSCLAG00000012809) #33	PPP3CC (ENSCLAG00000015203) #34	SORBS3 (ENSCLAG00000014309) #35	ENSCLAG00000014272 #36	C8orf58 (ENSCLAG00000014186) #37
Lagomorpha	ANCESTRAL SPECIES	128											ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Rabbit	MODERN SPECIES	531											GFRA2 (ENSOCUG00000001190) #17	ENSOCUG00000020947 #18	XPO7 (ENSOCUG00000005065) #19	NPM2 (ENSOCUG00000021756) #20	FGF17 (ENSOCUG00000025535) #21	DMTN (ENSOCUG00000024877) #22	FHIP2B (ENSOCUG00000005031) #23	ENSOCUG00000005036 #24	HR (ENSOCUG00000026384) #25	ENSOCUG00000002017 #26	LGI3 (ENSOCUG00000002020) #27	ENSOCUG00000002024 #28	BMP1 (ENSOCUG00000010592) #29	PHYHIP (ENSOCUG00000009909) #30	POLR3D (ENSOCUG00000017410) #31	PIWIL2 (ENSOCUG00000006261) #32	SLC39A14 (ENSOCUG00000008681) #33	PPP3CC (ENSOCUG00000006535) #34	SORBS3 (ENSOCUG00000027519) #35	PDLIM2 (ENSOCUG00000021361) #36	C8orf58 (ENSOCUG00000013217) #37
Pika	MODERN SPECIES	1028													XPO7 (ENSOPRG00000012906) #19	NPM2 (ENSOPRG00000012940) #20	FGF17 (ENSOPRG00000012957) #21	ENSOPRG00000012965 #22	FHIP2B (ENSOPRG00000013021) #23	ENSOPRG00000013052 #24	LGI3 (ENSOPRG00000013108) #27	BMP1 (ENSOPRG00000013121) #29	POLR3D (ENSOPRG00000013146) #31	PIWIL2 (ENSOPRG00000013167) #32	PPP3CC (ENSOPRG00000013192) #34	SORBS3 (ENSOPRG00000013214) #35	PDLIM2 (ENSOPRG00000013237) #36	C8orf58 (ENSOPRG00000013255) #37	CCAR2 (ENSOPRG00000013271)	BIN3 (ENSOPRG00000013301)	EGR3 (ENSOPRG00000013328)	PEBP4 (ENSOPRG00000013337)	RHOBTB2 (ENSOPRG00000013353)
Tree shrew	MODERN SPECIES	2863																ENSTBEG00000001442 #22
Primates	ANCESTRAL SPECIES	25	ENSGT00390000012054.b	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34
Haplorrhini	ANCESTRAL SPECIES	27	ENSGT00390000012054.b	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34
Tarsier	MODERN SPECIES	6723											GFRA2 (ENSTSYG00000034433) #17	DOK2 (ENSTSYG00000033054) #18	XPO7 (ENSTSYG00000011721) #19	NPM2 (ENSTSYG00000026275) #20	FGF17 (ENSTSYG00000031916) #21	DMTN (ENSTSYG00000035753) #22
Simiiformes	ANCESTRAL SPECIES	25	ENSGT00390000012054.b.cb	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34
Platyrrhini	ANCESTRAL SPECIES	29	ENSGT00390000012054.b.bb	ENSGT00910000146896	ENSGT00940000156591	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Cebidae	ANCESTRAL SPECIES	30	ENSGT00390000012054.b.bb	ENSGT00910000146896	ENSGT00940000156591	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Marmoset	MODERN SPECIES	4	PSD3 (ENSCJAG00000040768)	SH2D4A (ENSCJAG00000014251)	CSGALNACT1 (ENSCJAG00000014270)	INTS10 (ENSCJAG00000014313)	LPL (ENSCJAG00000014346)	SLC18A1 (ENSCJAG00000014369)	ATP6V1B2 (ENSCJAG00000014436)	LZTS1 (ENSCJAG00000014459)	ENSCJAG00000076970	GFRA2 (ENSCJAG00000020432) #17	ENSCJAG00000066215	DOK2 (ENSCJAG00000020429) #18	XPO7 (ENSCJAG00000020396) #19	NPM2 (ENSCJAG00000020389) #20	FGF17 (ENSCJAG00000020336) #21	DMTN (ENSCJAG00000020366) #22	FHIP2B (ENSCJAG00000020359) #23	NUDT18 (ENSCJAG00000020357) #24	HR (ENSCJAG00000020347) #25	REEP4 (ENSCJAG00000020323) #26	LGI3 (ENSCJAG00000020317) #27	SFTPC (ENSCJAG00000020313) #28	BMP1 (ENSCJAG00000020290) #29	PHYHIP (ENSCJAG00000059701) #30	POLR3D (ENSCJAG00000020278) #31	PIWIL2 (ENSCJAG00000020263) #32	SLC39A14 (ENSCJAG00000038713) #33	PPP3CC (ENSCJAG00000020251) #34	SORBS3 (ENSCJAG00000020235) #35	PDLIM2 (ENSCJAG00000020226) #36	C8orf58 (ENSCJAG00000020218) #37
Cebidae_a	ANCESTRAL SPECIES	44	ENSGT00390000012054.b.bb	ENSGT00910000146896	ENSGT00940000156591	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Bolivian squirrel monkey	MODERN SPECIES	132											GFRA2 (ENSSBOG00000020287) #17	DOK2 (ENSSBOG00000033525) #18	XPO7 (ENSSBOG00000019149) #19	NPM2 (ENSSBOG00000025301) #20	FGF17 (ENSSBOG00000027824) #21	DMTN (ENSSBOG00000031139) #22	FHIP2B (ENSSBOG00000025249) #23	NUDT18 (ENSSBOG00000002418) #24	HR (ENSSBOG00000019701) #25	REEP4 (ENSSBOG00000033132) #26	LGI3 (ENSSBOG00000031807) #27	SFTPC (ENSSBOG00000004104) #28	BMP1 (ENSSBOG00000033938) #29	PHYHIP (ENSSBOG00000027779) #30	POLR3D (ENSSBOG00000024956) #31	PIWIL2 (ENSSBOG00000030819) #32	SLC39A14 (ENSSBOG00000027609) #33	PPP3CC (ENSSBOG00000018145) #34	SORBS3 (ENSSBOG00000021723) #35	PDLIM2 (ENSSBOG00000019060) #36	C8orf58 (ENSSBOG00000013565) #37
Capuchin	MODERN SPECIES	221														NPM2 (ENSCCAG00000035076) #20	FGF17 (ENSCCAG00000031622) #21	DMTN (ENSCCAG00000019384) #22	FHIP2B (ENSCCAG00000022871) #23	NUDT18 (ENSCCAG00000037530) #24	HR (ENSCCAG00000015914) #25	REEP4 (ENSCCAG00000034865) #26	LGI3 (ENSCCAG00000036853) #27	SFTPC (ENSCCAG00000024595) #28	BMP1 (ENSCCAG00000035756) #29	PHYHIP (ENSCCAG00000020644) #30	POLR3D (ENSCCAG00000019817) #31	PIWIL2 (ENSCCAG00000033068) #32	SLC39A14 (ENSCCAG00000023190) #33	PPP3CC (ENSCCAG00000020386) #34	SORBS3 (ENSCCAG00000027374) #35	PDLIM2 (ENSCCAG00000038057) #36	C8orf58 (ENSCCAG00000036764) #37
Mas night monkey	MODERN SPECIES	974	ASAH1 (ENSANAG00000021729)	ENSANAG00000024921	PSD3 (ENSANAG00000029537)	SH2D4A (ENSANAG00000027643)	CSGALNACT1 (ENSANAG00000034148)	INTS10 (ENSANAG00000025108)	LPL (ENSANAG00000025856)	SLC18A1 (ENSANAG00000028925)	ATP6V1B2 (ENSANAG00000032926)	LZTS1 (ENSANAG00000037181)	GFRA2 (ENSANAG00000023171) #17	DOK2 (ENSANAG00000028831) #18	ENSANAG00000026595 #19	ENSANAG00000038138 #20	FGF17 (ENSANAG00000033888) #21	DMTN (ENSANAG00000038467) #22	FHIP2B (ENSANAG00000023830) #23	NUDT18 (ENSANAG00000026181) #24	HR (ENSANAG00000030904) #25	REEP4 (ENSANAG00000028478) #26	LGI3 (ENSANAG00000029953) #27	SFTPC (ENSANAG00000023981) #28	BMP1 (ENSANAG00000035054) #29	PHYHIP (ENSANAG00000034871) #30	POLR3D (ENSANAG00000030023) #31	PIWIL2 (ENSANAG00000027198) #32	SLC39A14 (ENSANAG00000036843) #33	PPP3CC (ENSANAG00000025764) #34	SORBS3 (ENSANAG00000026249) #35	PDLIM2 (ENSANAG00000037493) #36	C8orf58 (ENSANAG00000026815) #37
Catarrhini	ANCESTRAL SPECIES	15	ENSGT00430000032882	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000007149.i.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34
Hominoidea	ANCESTRAL SPECIES	14	ENSGT00430000032882	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000007149.i.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00910000146987	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195
Hominidae	ANCESTRAL SPECIES	15	ENSGT00940000156591	ENSGT00430000032882	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00910000146987	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00430000032882	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000167974	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00910000146987	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000167974	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00910000146987	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34
Pan	ANCESTRAL SPECIES	30	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000167974	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00910000146987	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35
Chimpanzee	MODERN SPECIES	21	PSD3 (ENSPTRG00000020031)	ENSPTRG00000052191	SH2D4A (ENSPTRG00000020034)	CSGALNACT1 (ENSPTRG00000020035)	INTS10 (ENSPTRG00000049064)	LPL (ENSPTRG00000020038)	SLC18A1 (ENSPTRG00000020039)	ATP6V1B2 (ENSPTRG00000020040)	LZTS1 (ENSPTRG00000042132)	ENSPTRG00000049958	GFRA2 (ENSPTRG00000020042) #17	DOK2 (ENSPTRG00000020043) #18	XPO7 (ENSPTRG00000020044) #19	NPM2 (ENSPTRG00000020045) #20	FGF17 (ENSPTRG00000020046) #21	DMTN (ENSPTRG00000020047) #22	FHIP2B (ENSPTRG00000020048) #23	ENSPTRG00000044059	NUDT18 (ENSPTRG00000020049) #24	HR (ENSPTRG00000020050) #25	REEP4 (ENSPTRG00000020051) #26	LGI3 (ENSPTRG00000020052) #27	SFTPC (ENSPTRG00000020053) #28	BMP1 (ENSPTRG00000020054) #29	ENSPTRG00000050226	PHYHIP (ENSPTRG00000020055) #30	POLR3D (ENSPTRG00000020056) #31	PIWIL2 (ENSPTRG00000022613) #32	SLC39A14 (ENSPTRG00000020058) #33	PPP3CC (ENSPTRG00000020059) #34	SORBS3 (ENSPTRG00000020061) #35
Bonobo	MODERN SPECIES	21	ENSPPAG00000013642	PSD3 (ENSPPAG00000026209)	SH2D4A (ENSPPAG00000029266)	CSGALNACT1 (ENSPPAG00000018139)	INTS10 (ENSPPAG00000011743)	LPL (ENSPPAG00000026199)	SLC18A1 (ENSPPAG00000038432)	ATP6V1B2 (ENSPPAG00000043352)	LZTS1 (ENSPPAG00000038430)	ENSPPAG00000039430	GFRA2 (ENSPPAG00000004816) #17	DOK2 (ENSPPAG00000039262) #18	XPO7 (ENSPPAG00000028443) #19	NPM2 (ENSPPAG00000040749) #20	FGF17 (ENSPPAG00000042990) #21	DMTN (ENSPPAG00000041277) #22	FHIP2B (ENSPPAG00000044138) #23	ENSPPAG00000043637	NUDT18 (ENSPPAG00000031703) #24	HR (ENSPPAG00000032662) #25	REEP4 (ENSPPAG00000035458) #26	LGI3 (ENSPPAG00000036882) #27	SFTPC (ENSPPAG00000039784) #28	BMP1 (ENSPPAG00000020298) #29	PHYHIP (ENSPPAG00000028451) #30	POLR3D (ENSPPAG00000029591) #31	PIWIL2 (ENSPPAG00000033460) #32	SLC39A14 (ENSPPAG00000002345) #33	PPP3CC (ENSPPAG00000034859) #34	SORBS3 (ENSPPAG00000031630) #35	ENSPPAG00000037870 #36
Human	MODERN SPECIES	20	NAT1 (ENSG00000171428)	NAT2 (ENSG00000156006)	PSD3 (ENSG00000156011)	SH2D4A (ENSG00000104611)	CSGALNACT1 (ENSG00000147408)	INTS10 (ENSG00000104613)	LPL (ENSG00000175445)	SLC18A1 (ENSG00000036565)	ATP6V1B2 (ENSG00000147416)	LZTS1 (ENSG00000061337)	GFRA2 (ENSG00000168546) #17	DOK2 (ENSG00000147443) #18	XPO7 (ENSG00000130227) #19	NPM2 (ENSG00000158806) #20	FGF17 (ENSG00000158815) #21	DMTN (ENSG00000158856) #22	FHIP2B (ENSG00000158863) #23	NUDT18 (ENSG00000275074) #24	HR (ENSG00000168453) #25	HRURF (ENSG00000288677)	REEP4 (ENSG00000168476) #26	LGI3 (ENSG00000168481) #27	SFTPC (ENSG00000168484) #28	BMP1 (ENSG00000168487) #29	PHYHIP (ENSG00000168490) #30	POLR3D (ENSG00000168495) #31	PIWIL2 (ENSG00000197181) #32	SLC39A14 (ENSG00000104635) #33	PPP3CC (ENSG00000120910) #34	SORBS3 (ENSG00000120896) #35	PDLIM2 (ENSG00000120913) #36
Gorilla	MODERN SPECIES	21	ENSGGOG00000038176	ENSGGOG00000009657	CSGALNACT1 (ENSGGOG00000009665)	INTS10 (ENSGGOG00000000190)	LPL (ENSGGOG00000015435)	SLC18A1 (ENSGGOG00000003882)	ATP6V1B2 (ENSGGOG00000003888)	LZTS1 (ENSGGOG00000000591)	ENSGGOG00000040023	ENSGGOG00000037512	GFRA2 (ENSGGOG00000013737) #17	DOK2 (ENSGGOG00000000207) #18	XPO7 (ENSGGOG00000014954) #19	NPM2 (ENSGGOG00000007071) #20	FGF17 (ENSGGOG00000007066) #21	DMTN (ENSGGOG00000002742) #22	FHIP2B (ENSGGOG00000004475) #23	ENSGGOG00000037224	NUDT18 (ENSGGOG00000004482) #24	HR (ENSGGOG00000004484) #25	REEP4 (ENSGGOG00000004492) #26	LGI3 (ENSGGOG00000000834) #27	ENSGGOG00000038076	PHYHIP (ENSGGOG00000007296) #30	POLR3D (ENSGGOG00000007302) #31	ENSGGOG00000008783 #32	SLC39A14 (ENSGGOG00000003765) #33	ENSGGOG00000038991	PPP3CC (ENSGGOG00000012671) #34	ENSGGOG00000040777	SORBS3 (ENSGGOG00000002413) #35
Orangutan	MODERN SPECIES	21	ENSPPYG00000031671	NAT2 (ENSPPYG00000033542)	PSD3 (ENSPPYG00000018396)	ENSPPYG00000031346	SH2D4A (ENSPPYG00000018397)	CSGALNACT1 (ENSPPYG00000018398)	INTS10 (ENSPPYG00000018400)	LPL (ENSPPYG00000030867)	SLC18A1 (ENSPPYG00000018402)	ATP6V1B2 (ENSPPYG00000018403)	LZTS1 (ENSPPYG00000018404)	GFRA2 (ENSPPYG00000018405) #17	DOK2 (ENSPPYG00000018406) #18	XPO7 (ENSPPYG00000018407) #19	FGF17 (ENSPPYG00000018409) #21	DMTN (ENSPPYG00000018410) #22	FHIP2B (ENSPPYG00000018411) #23	ENSPPYG00000040778 #24	HR (ENSPPYG00000018413) #25	REEP4 (ENSPPYG00000018414) #26	LGI3 (ENSPPYG00000018415) #27	SFTPC (ENSPPYG00000018416) #28	BMP1 (ENSPPYG00000037265) #29	PHYHIP (ENSPPYG00000037185) #30	POLR3D (ENSPPYG00000018419) #31	PIWIL2 (ENSPPYG00000018420) #32	SLC39A14 (ENSPPYG00000018421) #33	PPP3CC (ENSPPYG00000018422) #34	SORBS3 (ENSPPYG00000018423) #35	ENSPPYG00000018424 #36	C8orf58 (ENSPPYG00000018425) #37
Gibbon	MODERN SPECIES	23	TBC1D5 (ENSNLEG00000000935)	ENSNLEG00000034876	ENSNLEG00000031530	SATB1 (ENSNLEG00000000912)	ENSNLEG00000031311	KCNH8 (ENSNLEG00000000890)	SLC18A1 (ENSNLEG00000000859)	ATP6V1B2 (ENSNLEG00000000794)	LZTS1 (ENSNLEG00000000782)	ENSNLEG00000028452	ENSNLEG00000000770 #17	DOK2 (ENSNLEG00000026541) #18	XPO7 (ENSNLEG00000026557) #19	NPM2 (ENSNLEG00000035765) #20	FGF17 (ENSNLEG00000027380) #21	DMTN (ENSNLEG00000033363) #22	FHIP2B (ENSNLEG00000031590) #23	ENSNLEG00000032535	NUDT18 (ENSNLEG00000028376) #24	HR (ENSNLEG00000031366) #25	REEP4 (ENSNLEG00000026748) #26	LGI3 (ENSNLEG00000027653) #27	SFTPC (ENSNLEG00000029765) #28	BMP1 (ENSNLEG00000031878) #29	ENSNLEG00000033421	PHYHIP (ENSNLEG00000028977) #30	ENSNLEG00000015502 #31	PIWIL2 (ENSNLEG00000015534) #32	SLC39A14 (ENSNLEG00000015557) #33	PPP3CC (ENSNLEG00000015570) #34	SORBS3 (ENSNLEG00000015594) #35
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT00430000032882	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000007149.i.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00910000146987	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35
Rhinopithecus	ANCESTRAL SPECIES	13							ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000007149.i.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00910000146987	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Black snub-nosed monkey	MODERN SPECIES	2173												DOK2 (ENSRBIG00000028764) #18	XPO7 (ENSRBIG00000044650) #19	NPM2 (ENSRBIG00000029235) #20	FGF17 (ENSRBIG00000039451) #21	DMTN (ENSRBIG00000043953) #22	FHIP2B (ENSRBIG00000042849) #23	NUDT18 (ENSRBIG00000037911) #24	HR (ENSRBIG00000035768) #25	REEP4 (ENSRBIG00000043571) #26	LGI3 (ENSRBIG00000014202) #27	SFTPC (ENSRBIG00000043642) #28	ENSRBIG00000028477	BMP1 (ENSRBIG00000026588) #29	PHYHIP (ENSRBIG00000034495) #30	POLR3D (ENSRBIG00000035406) #31
Golden snub-nosed monkey	MODERN SPECIES	1213									ENSRROG00000038519	GFRA2 (ENSRROG00000041259) #17	DOK2 (ENSRROG00000040940) #18	ENSRROG00000028479	XPO7 (ENSRROG00000041370) #19	NPM2 (ENSRROG00000044119) #20	FGF17 (ENSRROG00000037640) #21	DMTN (ENSRROG00000042891) #22	FHIP2B (ENSRROG00000010275) #23	NUDT18 (ENSRROG00000034673) #24	HR (ENSRROG00000041553) #25	REEP4 (ENSRROG00000032220) #26	LGI3 (ENSRROG00000031727) #27	SFTPC (ENSRROG00000038698) #28	BMP1 (ENSRROG00000038430) #29	PHYHIP (ENSRROG00000035566) #30	POLR3D (ENSRROG00000037278) #31	PIWIL2 (ENSRROG00000037847) #32	SLC39A14 (ENSRROG00000031789) #33	PPP3CC (ENSRROG00000037107) #34	ENSRROG00000036409	SORBS3 (ENSRROG00000038814) #35	PDLIM2 (ENSRROG00000040746) #36
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT00430000032882	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000007149.i.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00910000146987	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35
Vervet Monkey	MODERN SPECIES	27	NAT1 (ENSCSAG00000018520)	NAT2 (ENSCSAG00000018521)	PSD3 (ENSCSAG00000016719)	SH2D4A (ENSCSAG00000016716)	CSGALNACT1 (ENSCSAG00000016715)	INTS10 (ENSCSAG00000016707)	LPL (ENSCSAG00000016700)	SLC18A1 (ENSCSAG00000016697)	ATP6V1B2 (ENSCSAG00000016689)	LZTS1 (ENSCSAG00000016684)	GFRA2 (ENSCSAG00000016680) #17	DOK2 (ENSCSAG00000016676) #18	XPO7 (ENSCSAG00000016659) #19	NPM2 (ENSCSAG00000016588) #20	FGF17 (ENSCSAG00000016583) #21	DMTN (ENSCSAG00000016581) #22	FHIP2B (ENSCSAG00000016576) #23	NUDT18 (ENSCSAG00000016570) #24	HR (ENSCSAG00000016565) #25	REEP4 (ENSCSAG00000016559) #26	LGI3 (ENSCSAG00000016552) #27	SFTPC (ENSCSAG00000016543) #28	BMP1 (ENSCSAG00000016537) #29	PHYHIP (ENSCSAG00000016530) #30	POLR3D (ENSCSAG00000016525) #31	PIWIL2 (ENSCSAG00000016512) #32	SLC39A14 (ENSCSAG00000016470) #33	PPP3CC (ENSCSAG00000016452) #34	SORBS3 (ENSCSAG00000016403) #35	PDLIM2 (ENSCSAG00000016392) #36	C8orf58 (ENSCSAG00000016376) #37
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00430000032882	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000007149.i.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00910000146987	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35
Macaca	ANCESTRAL SPECIES	14	ENSGT00940000156591	ENSGT00430000032882	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00910000146987	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35
Macaca_a	ANCESTRAL SPECIES	16	ENSGT00390000008767.a.a.a.a.g.b	ENSGT00390000012054.b.cb	ENSGT01100000264947	ENSGT00940000156591	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Crab-eating macaque	MODERN SPECIES	18	NAT2 (ENSMFAG00000050025)	ENSMFAG00000058392	PSD3 (ENSMFAG00000001770)	SH2D4A (ENSMFAG00000007156)	CSGALNACT1 (ENSMFAG00000045019)	ENSMFAG00000050311	INTS10 (ENSMFAG00000039216)	LPL (ENSMFAG00000041424)	SLC18A1 (ENSMFAG00000029619)	ATP6V1B2 (ENSMFAG00000033694)	LZTS1 (ENSMFAG00000010460)	GFRA2 (ENSMFAG00000023628) #17	DOK2 (ENSMFAG00000026923) #18	XPO7 (ENSMFAG00000030886) #19	ENSMFAG00000032610 #21	DMTN (ENSMFAG00000036684) #22	REEP4 (ENSMFAG00000036428) #26	FHIP2B (ENSMFAG00000041716) #23	NUDT18 (ENSMFAG00000001150) #24	HR (ENSMFAG00000040324) #25	LGI3 (ENSMFAG00000031993) #27	SFTPC (ENSMFAG00000003047) #28	BMP1 (ENSMFAG00000040256) #29	PHYHIP (ENSMFAG00000044768) #30	POLR3D (ENSMFAG00000029141) #31	PIWIL2 (ENSMFAG00000038537) #32	SLC39A14 (ENSMFAG00000003405) #33	PPP3CC (ENSMFAG00000007036) #34	SORBS3 (ENSMFAG00000030516) #35	PDLIM2 (ENSMFAG00000032463) #36	ENSMFAG00000040671 #37
Rhesus	MODERN SPECIES	18	ENSMMUG00000052632	PSD3 (ENSMMUG00000016385)	SH2D4A (ENSMMUG00000000129)	CSGALNACT1 (ENSMMUG00000000130)	INTS10 (ENSMMUG00000011774)	LPL (ENSMMUG00000004712)	SLC18A1 (ENSMMUG00000019999)	ATP6V1B2 (ENSMMUG00000020000)	LZTS1 (ENSMMUG00000017711)	ENSMMUG00000051330	ENSMMUG00000050781	ENSMMUG00000065227	GFRA2 (ENSMMUG00000023361) #17	DOK2 (ENSMMUG00000023464) #18	XPO7 (ENSMMUG00000002032) #19	DMTN (ENSMMUG00000005870) #22	FHIP2B (ENSMMUG00000013017) #23	NUDT18 (ENSMMUG00000049401) #24	HR (ENSMMUG00000013022) #25	REEP4 (ENSMMUG00000059519) #26	LGI3 (ENSMMUG00000013028) #27	SFTPC (ENSMMUG00000013029) #28	BMP1 (ENSMMUG00000013031) #29	PHYHIP (ENSMMUG00000013032) #30	POLR3D (ENSMMUG00000023226) #31	PIWIL2 (ENSMMUG00000014438) #32	SLC39A14 (ENSMMUG00000017713) #33	PPP3CC (ENSMMUG00000014442) #34	SORBS3 (ENSMMUG00000014445) #35	PDLIM2 (ENSMMUG00000018520) #36	CCAR2 (ENSMMUG00000021991)
Pig-tailed macaque	MODERN SPECIES	579	ENSMNEG00000028769	SH2D4A (ENSMNEG00000031934)	CSGALNACT1 (ENSMNEG00000044216)	INTS10 (ENSMNEG00000044608)	LPL (ENSMNEG00000033997)	SLC18A1 (ENSMNEG00000045015)	ATP6V1B2 (ENSMNEG00000039883)	LZTS1 (ENSMNEG00000044405)	ENSMNEG00000043481	ENSMNEG00000029180	GFRA2 (ENSMNEG00000029112) #17	DOK2 (ENSMNEG00000037176) #18	XPO7 (ENSMNEG00000032724) #19	NPM2 (ENSMNEG00000010994) #20	FGF17 (ENSMNEG00000041787) #21	DMTN (ENSMNEG00000044690) #22	FHIP2B (ENSMNEG00000028867) #23	ENSMNEG00000038049	NUDT18 (ENSMNEG00000044949) #24	HR (ENSMNEG00000035451) #25	REEP4 (ENSMNEG00000027664) #26	LGI3 (ENSMNEG00000042561) #27	SFTPC (ENSMNEG00000031500) #28	ENSMNEG00000045192	BMP1 (ENSMNEG00000036161) #29	PHYHIP (ENSMNEG00000029448) #30	POLR3D (ENSMNEG00000039410) #31	PIWIL2 (ENSMNEG00000029268) #32	SLC39A14 (ENSMNEG00000038055) #33	PPP3CC (ENSMNEG00000042956) #34	SORBS3 (ENSMNEG00000038728) #35
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT00940000156591	ENSGT00430000032882	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000007149.i.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00910000146987	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35
Olive baboon	MODERN SPECIES	18	PSD3 (ENSPANG00000002437)	ENSPANG00000038414	SH2D4A (ENSPANG00000018168)	CSGALNACT1 (ENSPANG00000008981)	INTS10 (ENSPANG00000000470)	LPL (ENSPANG00000006403)	SLC18A1 (ENSPANG00000011419)	ATP6V1B2 (ENSPANG00000012407)	LZTS1 (ENSPANG00000001030)	ENSPANG00000043212	GFRA2 (ENSPANG00000008821) #17	DOK2 (ENSPANG00000008980) #18	XPO7 (ENSPANG00000008979) #19	NPM2 (ENSPANG00000031080) #20	FGF17 (ENSPANG00000029232) #21	DMTN (ENSPANG00000020182) #22	FHIP2B (ENSPANG00000009530) #23	NUDT18 (ENSPANG00000016695) #24	HR (ENSPANG00000022909) #25	REEP4 (ENSPANG00000034622) #26	LGI3 (ENSPANG00000032628) #27	SFTPC (ENSPANG00000020597) #28	BMP1 (ENSPANG00000018462) #29	PHYHIP (ENSPANG00000025358) #30	POLR3D (ENSPANG00000009440) #31	PIWIL2 (ENSPANG00000018061) #32	SLC39A14 (ENSPANG00000014294) #33	PPP3CC (ENSPANG00000015060) #34	SORBS3 (ENSPANG00000018889) #35	PDLIM2 (ENSPANG00000022732) #36	C8orf58 (ENSPANG00000026225) #37
Cercopithecinae_d	ANCESTRAL SPECIES	50	ENSGT00940000156591	ENSGT00430000032882	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000007149.i.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00910000146987	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35
Drill	MODERN SPECIES	1597											GFRA2 (ENSMLEG00000034552) #17	DOK2 (ENSMLEG00000013752) #18	XPO7 (ENSMLEG00000037104) #19	NPM2 (ENSMLEG00000030071) #20	FGF17 (ENSMLEG00000043499) #21	DMTN (ENSMLEG00000035618) #22	FHIP2B (ENSMLEG00000030917) #23	ENSMLEG00000031810	NUDT18 (ENSMLEG00000035829) #24	HR (ENSMLEG00000039439) #25	REEP4 (ENSMLEG00000035103) #26	LGI3 (ENSMLEG00000032021) #27	SFTPC (ENSMLEG00000039477) #28	ENSMLEG00000011939	BMP1 (ENSMLEG00000037648) #29	PHYHIP (ENSMLEG00000006425) #30	POLR3D (ENSMLEG00000031413) #31	PIWIL2 (ENSMLEG00000041768) #32	SLC39A14 (ENSMLEG00000044350) #33	PPP3CC (ENSMLEG00000015454) #34	SORBS3 (ENSMLEG00000038658) #35
Sooty mangabey	MODERN SPECIES	555			SH2D4A (ENSCATG00000033202)	CSGALNACT1 (ENSCATG00000013386)	ENSCATG00000020864	LPL (ENSCATG00000041105)	SLC18A1 (ENSCATG00000030151)	ATP6V1B2 (ENSCATG00000045180)	LZTS1 (ENSCATG00000044143)	ENSCATG00000032546	GFRA2 (ENSCATG00000030482) #17	DOK2 (ENSCATG00000042874) #18	XPO7 (ENSCATG00000043585) #19	NPM2 (ENSCATG00000031833) #20	FGF17 (ENSCATG00000045309) #21	DMTN (ENSCATG00000041472) #22	ENSCATG00000024074	FHIP2B (ENSCATG00000031433) #23	NUDT18 (ENSCATG00000031847) #24	HR (ENSCATG00000032592) #25	REEP4 (ENSCATG00000041240) #26	LGI3 (ENSCATG00000033781) #27	SFTPC (ENSCATG00000039734) #28	ENSCATG00000036746	BMP1 (ENSCATG00000036263) #29	PHYHIP (ENSCATG00000037111) #30	POLR3D (ENSCATG00000025950) #31	PIWIL2 (ENSCATG00000039784) #32	SLC39A14 (ENSCATG00000041018) #33	PPP3CC (ENSCATG00000039533) #34	SORBS3 (ENSCATG00000037430) #35
Strepsirrhini	ANCESTRAL SPECIES	25	ENSGT00390000012054.b	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Bushbaby	MODERN SPECIES	189	ENSOGAG00000025826	PSD3 (ENSOGAG00000029878)	SH2D4A (ENSOGAG00000002176)	CSGALNACT1 (ENSOGAG00000002178)	INTS10 (ENSOGAG00000000559)	LPL (ENSOGAG00000000562)	SLC18A1 (ENSOGAG00000000563)	ATP6V1B2 (ENSOGAG00000000565)	LZTS1 (ENSOGAG00000008162)	ENSOGAG00000029073	GFRA2 (ENSOGAG00000033772) #17	DOK2 (ENSOGAG00000008350) #18	XPO7 (ENSOGAG00000015218) #19	NPM2 (ENSOGAG00000011562) #20	FGF17 (ENSOGAG00000004882) #21	DMTN (ENSOGAG00000029018) #22	FHIP2B (ENSOGAG00000004887) #23	NUDT18 (ENSOGAG00000004890) #24	HR (ENSOGAG00000033391) #25	REEP4 (ENSOGAG00000004897) #26	LGI3 (ENSOGAG00000004899) #27	SFTPC (ENSOGAG00000004903) #28	ENSOGAG00000031859	BMP1 (ENSOGAG00000004905) #29	PHYHIP (ENSOGAG00000004910) #30	POLR3D (ENSOGAG00000004912) #31	PIWIL2 (ENSOGAG00000004913) #32	SLC39A14 (ENSOGAG00000010558) #33	PPP3CC (ENSOGAG00000010563) #34	SORBS3 (ENSOGAG00000010567) #35	PDLIM2 (ENSOGAG00000010575) #36
Lemuriformes	ANCESTRAL SPECIES	32	ENSGT00390000012054.b	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Mouse lemur	MODERN SPECIES	12	ASAH1 (ENSMICG00000006697)	PSD3 (ENSMICG00000005387)	SH2D4A (ENSMICG00000010215)	CSGALNACT1 (ENSMICG00000010223)	INTS10 (ENSMICG00000010227)	LPL (ENSMICG00000010245)	SLC18A1 (ENSMICG00000011689)	ENSMICG00000001791	LZTS1 (ENSMICG00000001804)	GFRA2 (ENSMICG00000047452) #17	DOK2 (ENSMICG00000011568) #18	ENSMICG00000032260	XPO7 (ENSMICG00000011573) #19	ENSMICG00000030722 #20	FGF17 (ENSMICG00000029135) #21	DMTN (ENSMICG00000036651) #22	FHIP2B (ENSMICG00000000981) #23	NUDT18 (ENSMICG00000000990) #24	HR (ENSMICG00000001003) #25	REEP4 (ENSMICG00000001013) #26	LGI3 (ENSMICG00000001018) #27	SFTPC (ENSMICG00000001027) #28	BMP1 (ENSMICG00000031636) #29	PHYHIP (ENSMICG00000001045) #30	POLR3D (ENSMICG00000001049) #31	PIWIL2 (ENSMICG00000001062) #32	SLC39A14 (ENSMICG00000001076) #33	PPP3CC (ENSMICG00000001851) #34	SORBS3 (ENSMICG00000003915) #35	PDLIM2 (ENSMICG00000003919) #36	C8orf58 (ENSMICG00000017355) #37
Lemuriformes_a	ANCESTRAL SPECIES	34	ENSGT00390000012054.b	ENSGT00940000156591	ENSGT00680000101436	ENSGT00940000157357	ENSGT01050000244968.c	ENSGT00390000010950	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Greater bamboo lemur	MODERN SPECIES	673								SLC18A1 (ENSPSMG00000004593)	ATP6V1B2 (ENSPSMG00000004707)	LZTS1 (ENSPSMG00000004737)	GFRA2 (ENSPSMG00000004798) #17	DOK2 (ENSPSMG00000004822) #18	XPO7 (ENSPSMG00000005028) #19	ENSPSMG00000005172 #20	FGF17 (ENSPSMG00000005178) #21	DMTN (ENSPSMG00000005293) #22	FHIP2B (ENSPSMG00000005392) #23	NUDT18 (ENSPSMG00000005396) #24	HR (ENSPSMG00000005444) #25	REEP4 (ENSPSMG00000005543) #26	LGI3 (ENSPSMG00000005572) #27	SFTPC (ENSPSMG00000005592) #28	BMP1 (ENSPSMG00000005734) #29	PHYHIP (ENSPSMG00000005916) #30	POLR3D (ENSPSMG00000005925) #31	PIWIL2 (ENSPSMG00000006025) #32	SLC39A14 (ENSPSMG00000006113) #33	PPP3CC (ENSPSMG00000006186) #34	SORBS3 (ENSPSMG00000006317) #35	PDLIM2 (ENSPSMG00000006490) #36	C8orf58 (ENSPSMG00000006508) #37
Coquerels sifaka	MODERN SPECIES	919	ASAH1 (ENSPCOG00000000588)	ENSPCOG00000027679	SH2D4A (ENSPCOG00000026782)	CSGALNACT1 (ENSPCOG00000016764)	ENSPCOG00000012921	INTS10 (ENSPCOG00000025350)	LPL (ENSPCOG00000022366)	SLC18A1 (ENSPCOG00000021315)	ATP6V1B2 (ENSPCOG00000014950)	LZTS1 (ENSPCOG00000013647)	GFRA2 (ENSPCOG00000024434) #17	DOK2 (ENSPCOG00000021184) #18	XPO7 (ENSPCOG00000024431) #19	ENSPCOG00000018483 #20	FGF17 (ENSPCOG00000024485) #21	DMTN (ENSPCOG00000018595) #22	FHIP2B (ENSPCOG00000003043) #23	NUDT18 (ENSPCOG00000023646) #24	HR (ENSPCOG00000027676) #25	REEP4 (ENSPCOG00000020374) #26	LGI3 (ENSPCOG00000003250) #27	SFTPC (ENSPCOG00000028479) #28	BMP1 (ENSPCOG00000019817) #29	PHYHIP (ENSPCOG00000019188) #30	POLR3D (ENSPCOG00000028134) #31	PIWIL2 (ENSPCOG00000019344) #32	SLC39A14 (ENSPCOG00000017231) #33	PPP3CC (ENSPCOG00000018145) #34	SORBS3 (ENSPCOG00000023510) #35	PDLIM2 (ENSPCOG00000028327) #36	C8orf58 (ENSPCOG00000019584) #37
Laurasiatheria	ANCESTRAL SPECIES	24	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00680000101436	ENSGT00940000156591	ENSGT00390000012054.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00680000101436	ENSGT00940000156591	ENSGT00390000012054.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00940000158196	ENSGT00940000159053	ENSGT00940000157484	ENSGT00940000160540	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35
Suina	ANCESTRAL SPECIES	42							ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Pig	MODERN SPECIES	5	ENSSSCG00000009595	ENSSSCG00000051966	ENSSSCG00000057041	ENSSSCG00000033204	ENSSSCG00000061155	LPL (ENSSSCG00000040631)	ENSSSCG00000059730	SLC18A1 (ENSSSCG00000009601)	ATP6V1B2 (ENSSSCG00000028694)	LZTS1 (ENSSSCG00000028559)	GFRA2 (ENSSSCG00000009605) #17	DOK2 (ENSSSCG00000009612) #18	XPO7 (ENSSSCG00000009611) #19	NPM2 (ENSSSCG00000009610) #20	FGF17 (ENSSSCG00000009609) #21	DMTN (ENSSSCG00000009613) #22	FHIP2B (ENSSSCG00000009614) #23	NUDT18 (ENSSSCG00000009615) #24	HR (ENSSSCG00000009616) #25	REEP4 (ENSSSCG00000009617) #26	LGI3 (ENSSSCG00000033355) #27	SFTPC (ENSSSCG00000009619) #28	BMP1 (ENSSSCG00000009620) #29	PHYHIP (ENSSSCG00000009621) #30	POLR3D (ENSSSCG00000009622) #31	PIWIL2 (ENSSSCG00000030228) #32	SLC39A14 (ENSSSCG00000032622) #33	PPP3CC (ENSSSCG00000057024) #34	SORBS3 (ENSSSCG00000009626) #35	PDLIM2 (ENSSSCG00000009625) #36	C8orf58 (ENSSSCG00000009627) #37
Chacoan peccary	MODERN SPECIES	813	C8orf58 (ENSCWAG00000015807) #37	PDLIM2 (ENSCWAG00000015849) #36	SORBS3 (ENSCWAG00000015893) #35	PPP3CC (ENSCWAG00000016041) #34	SLC39A14 (ENSCWAG00000016115) #33	PIWIL2 (ENSCWAG00000016206) #32	POLR3D (ENSCWAG00000016531) #31	PHYHIP (ENSCWAG00000016574) #30	BMP1 (ENSCWAG00000016662) #29	SFTPC (ENSCWAG00000017012) #28	LGI3 (ENSCWAG00000017168) #27	REEP4 (ENSCWAG00000017280) #26	HR (ENSCWAG00000017341) #25	NUDT18 (ENSCWAG00000017407) #24	FHIP2B (ENSCWAG00000017436) #23	DMTN (ENSCWAG00000017503) #22	FGF17 (ENSCWAG00000017616) #21	NPM2 (ENSCWAG00000017693) #20	XPO7 (ENSCWAG00000017828) #19	DOK2 (ENSCWAG00000018110) #18	GFRA2 (ENSCWAG00000018182) #17	LZTS1 (ENSCWAG00000018404)	ATP6V1B2 (ENSCWAG00000018469)	SLC18A1 (ENSCWAG00000018534)	LPL (ENSCWAG00000018895)	ENSCWAG00000018935
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000157484	ENSGT00940000160540	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35
Camelidae	ANCESTRAL SPECIES	47	ENSGT00950000182964.a.b.a	ENSGT00940000158196	ENSGT00940000157484	ENSGT00940000160540	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418.r #36	ENSGT00390000000531 #37
Arabian camel	MODERN SPECIES	24	ENSCDRG00005017929	ENSCDRG00005007110	ENSCDRG00005007297	ENSCDRG00005007315	ENSCDRG00005007338	ENSCDRG00005007370	LPL (ENSCDRG00005007450)	SLC18A1 (ENSCDRG00005007507)	ATP6V1B2 (ENSCDRG00005007709)	LZTS1 (ENSCDRG00005007751)	GFRA2 (ENSCDRG00005007786) #17	DOK2 (ENSCDRG00005008290) #18	XPO7 (ENSCDRG00005008341) #19	NPM2 (ENSCDRG00005008638) #20	FGF17 (ENSCDRG00005008727) #21	DMTN (ENSCDRG00005008858) #22	FHIP2B (ENSCDRG00005009069) #23	ENSCDRG00005009247	NUDT18 (ENSCDRG00005009316) #24	HR (ENSCDRG00005009395) #25	REEP4 (ENSCDRG00005009491) #26	LGI3 (ENSCDRG00005009611) #27	SFTPC (ENSCDRG00005009742) #28	BMP1 (ENSCDRG00005009906) #29	PHYHIP (ENSCDRG00005013664) #30	POLR3D (ENSCDRG00005013725) #31	ENSCDRG00005013814	PIWIL2 (ENSCDRG00005013863) #32	SLC39A14 (ENSCDRG00005014310) #33	PPP3CC (ENSCDRG00005014493) #34	SORBS3 (ENSCDRG00005014846) #35
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000157484	ENSGT00940000160540	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35
Cetacea	ANCESTRAL SPECIES	9	ENSGT00940000160540	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT00940000160228	ENSGT00940000153505.a.b.b.k.a	ENSGT00940000162764.A.a.a	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Blue whale	MODERN SPECIES	17	SEMA4D (ENSBMSG00010005089)	SECISBP2 (ENSBMSG00010005076)	CKS2 (ENSBMSG00010005066)	SHC3 (ENSBMSG00010003082)	S1PR3 (ENSBMSG00010003071)	NXNL2 (ENSBMSG00010003054)	ENSBMSG00010003044	ENSBMSG00010003021	CDK20 (ENSBMSG00010003011)	LZTS1 (ENSBMSG00010003000)	GFRA2 (ENSBMSG00010002937) #17	DOK2 (ENSBMSG00010002903) #18	XPO7 (ENSBMSG00010002861) #19	ENSBMSG00010002839 #20	FGF17 (ENSBMSG00010002827) #21	DMTN (ENSBMSG00010002797) #22	FHIP2B (ENSBMSG00010002761) #23	NUDT18 (ENSBMSG00010002749) #24	HR (ENSBMSG00010002713) #25	REEP4 (ENSBMSG00010002672) #26	LGI3 (ENSBMSG00010002646) #27	SFTPC (ENSBMSG00010002602) #28	BMP1 (ENSBMSG00010002570) #29	PHYHIP (ENSBMSG00010002539) #30	POLR3D (ENSBMSG00010002520) #31	PIWIL2 (ENSBMSG00010002469) #32	SLC39A14 (ENSBMSG00010002422) #33	PPP3CC (ENSBMSG00010002372) #34	SORBS3 (ENSBMSG00010002336) #35	PDLIM2 (ENSBMSG00010002288) #36	C8orf58 (ENSBMSG00010002259) #37
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT00940000160228	ENSGT00950000183043.b.b.h	ENSGT00940000153505.a.b.b.k.a	ENSGT00940000153505.a.b.b.k.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Sperm whale	MODERN SPECIES	1179																DMTN (ENSPCTG00005022485) #22	FAM160B2 (ENSPCTG00005022491) #23	NUDT18 (ENSPCTG00005022493) #24	HR (ENSPCTG00005022498) #25	REEP4 (ENSPCTG00005022501) #26	LGI3 (ENSPCTG00005022502) #27	SFTPC (ENSPCTG00005022504) #28
Odontoceti_a	ANCESTRAL SPECIES	15	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT00940000160228	ENSGT00950000183043.b.b.h	ENSGT00940000153505.a.b.b.k.a	ENSGT00940000153505.a.b.b.k.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Dolphin	MODERN SPECIES	1291																DMTN (ENSTTRG00000012028) #22	FHIP2B (ENSTTRG00000012032) #23	NUDT18 (ENSTTRG00000012036) #24	HR (ENSTTRG00000012045) #25	REEP4 (ENSTTRG00000012058) #26	LGI3 (ENSTTRG00000012065) #27	SFTPC (ENSTTRG00000012067) #28
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT00940000160228	ENSGT00950000183043.b.b.h.e.b	ENSGT00940000153505.a.b.b.k.a	ENSGT00940000153505.a.b.b.k.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Vaquita	MODERN SPECIES	17	ENSPSNG00000001232	ENSPSNG00000001251	ENSPSNG00000001281	ENSPSNG00000001306	LPL (ENSPSNG00000001326)	SLC18A1 (ENSPSNG00000001437)	ATP6V1B2 (ENSPSNG00000001576)	LZTS1 (ENSPSNG00000001616)	ENSPSNG00000001639	ENSPSNG00000001663	GFRA2 (ENSPSNG00000001719) #17	DOK2 (ENSPSNG00000001773) #18	XPO7 (ENSPSNG00000001860) #19	ENSPSNG00000001930 #20	FGF17 (ENSPSNG00000001952) #21	DMTN (ENSPSNG00000002008) #22	FHIP2B (ENSPSNG00000002072) #23	NUDT18 (ENSPSNG00000002145) #24	HR (ENSPSNG00000002189) #25	REEP4 (ENSPSNG00000002252) #26	LGI3 (ENSPSNG00000002304) #27	SFTPC (ENSPSNG00000002339) #28	BMP1 (ENSPSNG00000002415) #29	PHYHIP (ENSPSNG00000002473) #30	POLR3D (ENSPSNG00000002507) #31	PIWIL2 (ENSPSNG00000002593) #32	SLC39A14 (ENSPSNG00000002752) #33	PPP3CC (ENSPSNG00000002828) #34	SORBS3 (ENSPSNG00000002897) #35	PDLIM2 (ENSPSNG00000002972) #36	C8orf58 (ENSPSNG00000003015) #37
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000160540	ENSGT00940000153947.A.m	ENSGT00550000074872	ENSGT00940000160228	ENSGT00940000153505.a.b.b.k.a	ENSGT00940000153505.a.b.b.k.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Narwhal	MODERN SPECIES	312	ENSMMNG00015012004	ENSMMNG00015011929	ENSMMNG00015011906	ENSMMNG00015011888	LPL (ENSMMNG00015011866)	SLC18A1 (ENSMMNG00015011784)	ATP6V1B2 (ENSMMNG00015011710)	LZTS1 (ENSMMNG00015011684)	ENSMMNG00015011659	GFRA2 (ENSMMNG00015021375) #17	DOK2 (ENSMMNG00015021342) #18	ENSMMNG00015021324	XPO7 (ENSMMNG00015021260) #19	NPM2 (ENSMMNG00015021204) #20	FGF17 (ENSMMNG00015021173) #21	DMTN (ENSMMNG00015021090) #22	FHIP2B (ENSMMNG00015020973) #23	NUDT18 (ENSMMNG00015020937) #24	HR (ENSMMNG00015020916) #25	REEP4 (ENSMMNG00015020874) #26	LGI3 (ENSMMNG00015020813) #27	SFTPC (ENSMMNG00015020750) #28	BMP1 (ENSMMNG00015020711) #29	PHYHIP (ENSMMNG00015020680) #30	POLR3D (ENSMMNG00015020653) #31	PIWIL2 (ENSMMNG00015020562) #32	SLC39A14 (ENSMMNG00015020468) #33	PPP3CC (ENSMMNG00015020407) #34	SORBS3 (ENSMMNG00015020324) #35	PDLIM2 (ENSMMNG00015020271) #36	C8orf58 (ENSMMNG00015020198) #37
Beluga whale	MODERN SPECIES	78	ENSDLEG00000018433	ENSDLEG00000018428	SPTLC1 (ENSDLEG00000018393)	ENSDLEG00000018357	ENSDLEG00000018350	ENSDLEG00000018324	LPL (ENSDLEG00000018314)	SLC18A1 (ENSDLEG00000018286)	ATP6V1B2 (ENSDLEG00000018278)	LZTS1 (ENSDLEG00000018270)	GFRA2 (ENSDLEG00000018245) #17	DOK2 (ENSDLEG00000018229) #18	XPO7 (ENSDLEG00000018185) #19	NPM2 (ENSDLEG00000018172) #20	FGF17 (ENSDLEG00000018156) #21	DMTN (ENSDLEG00000018117) #22	FAM160B2 (ENSDLEG00000018043) #23	NUDT18 (ENSDLEG00000018025) #24	HR (ENSDLEG00000017998) #25	REEP4 (ENSDLEG00000017975) #26	LGI3 (ENSDLEG00000017959) #27	SFTPC (ENSDLEG00000017925) #28	BMP1 (ENSDLEG00000017889) #29	PHYHIP (ENSDLEG00000017875) #30	POLR3D (ENSDLEG00000017852) #31	PIWIL2 (ENSDLEG00000017759) #32	SLC39A14 (ENSDLEG00000017693) #33	PPP3CC (ENSDLEG00000017652) #34	SORBS3 (ENSDLEG00000017622) #35	PDLIM2 (ENSDLEG00000017580) #36	C8orf58 (ENSDLEG00000017501) #37
Pecora	ANCESTRAL SPECIES	36							ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35
Percora_a	ANCESTRAL SPECIES	24	ENSGT00930000151031	ENSGT00940000157688	ENSGT00950000182992.a.a	ENSGT00940000157345.a	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34	ENSGT00970000197193	ENSGT00940000160558 #35
Bovidae	ANCESTRAL SPECIES	14	ENSGT01000000214440.A.b	ENSGT00930000151031	ENSGT00940000157688	ENSGT00950000182992.a.a.v	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34	ENSGT00970000197193	ENSGT00940000160558 #35
Caprinae	ANCESTRAL SPECIES	14	ENSGT01000000214440.A.b	ENSGT00930000151031	ENSGT00940000157688	ENSGT00950000182992.a.a.u.a	ENSGT00940000157345.a	ENSGT00950000183043.a.b.b.a.a.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020000666	ENSOARG00020000635	ENSOARG00020000588	LPL (ENSOARG00020000574)	SLC18A1 (ENSOARG00020000239)	ATP6V1B2 (ENSOARG00020000155)	LZTS1 (ENSOARG00020000131)	ENSOARG00020000094	ENSOARG00020023808	ENSOARG00020023803	GFRA2 (ENSOARG00020023673) #17	DOK2 (ENSOARG00020023652) #18	XPO7 (ENSOARG00020023445) #19	ENSOARG00020023411 #20	FGF17 (ENSOARG00020023369) #21	DMTN (ENSOARG00020022707) #22	FHIP2B (ENSOARG00020022611) #23	HR (ENSOARG00020022176) #25	REEP4 (ENSOARG00020022055) #26	LGI3 (ENSOARG00020021936) #27	SFTPC (ENSOARG00020021857) #28	BMP1 (ENSOARG00020021570) #29	PHYHIP (ENSOARG00020021526) #30	POLR3D (ENSOARG00020021425) #31	PIWIL2 (ENSOARG00020021105) #32	SLC39A14 (ENSOARG00020020996) #33	ENSOARG00020020965	PPP3CC (ENSOARG00020020737) #34	SORBS3 (ENSOARG00020020583) #35	PDLIM2 (ENSOARG00020020511) #36	C8orf58 (ENSOARG00020020420) #37
Goat	MODERN SPECIES	27	ENSCHIG00000015109	ENSCHIG00000008314	ENSCHIG00000023371	ENSCHIG00000017968	LPL (ENSCHIG00000025623)	SLC18A1 (ENSCHIG00000021575)	ATP6V1B2 (ENSCHIG00000016793)	LZTS1 (ENSCHIG00000022362)	ENSCHIG00000025219	GFRA2 (ENSCHIG00000016374) #17	ENSCHIG00000025910	DOK2 (ENSCHIG00000021822) #18	XPO7 (ENSCHIG00000016714) #19	NPM2 (ENSCHIG00000026056) #20	FGF17 (ENSCHIG00000026068) #21	DMTN (ENSCHIG00000019052) #22	FHIP2B (ENSCHIG00000020971) #23	NUDT18 (ENSCHIG00000025564) #24	HR (ENSCHIG00000024758) #25	REEP4 (ENSCHIG00000025331) #26	LGI3 (ENSCHIG00000025450) #27	SFTPC (ENSCHIG00000018635) #28	BMP1 (ENSCHIG00000023198) #29	PHYHIP (ENSCHIG00000011107) #30	POLR3D (ENSCHIG00000012279) #31	PIWIL2 (ENSCHIG00000022958) #32	SLC39A14 (ENSCHIG00000023885) #33	PPP3CC (ENSCHIG00000014803) #34	SORBS3 (ENSCHIG00000003972) #35	PDLIM2 (ENSCHIG00000013684) #36	CCAR2 (ENSCHIG00000007510)
Bovinae	ANCESTRAL SPECIES	14	ENSGT00930000151031	ENSGT00940000157688	ENSGT00950000182992.a.a.u.a	ENSGT00940000157345.a	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34	ENSGT00970000197193	ENSGT00940000160558 #35
Bos	ANCESTRAL SPECIES	10	ENSGT00940000157688	ENSGT00950000182992.a.a.u.a	ENSGT00940000157345.a	ENSGT00390000005569.x.a.a.b.c.a	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34	ENSGT00970000197193	ENSGT00940000160558 #35
Bos_b	ANCESTRAL SPECIES	3	ENSGT00940000157345.a.b	ENSGT00950000182992.a.a.u.b	ENSGT00390000005569.x.a.a.b.c.a	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.b	ENSGT00940000157178	ENSGT00390000018141.i.a.b.b.b.a.b.a.b.a.b.b.b.b	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00970000197193	ENSGT00940000160558 #35	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.a.b.a.b.a.b
Hybrid Bos Indicus	MODERN SPECIES	27	LPL (ENSBIXG00005028031)	ENSBIXG00005027982	SLC18A1 (ENSBIXG00005027964)	ATP6V1B2 (ENSBIXG00005027918)	LZTS1 (ENSBIXG00005027830)	ENSBIXG00005027774	ENSBIXG00005027763	ENSBIXG00005027749	ENSBIXG00005027723	ENSBIXG00005004760	GFRA2 (ENSBIXG00005027647) #17	DOK2 (ENSBIXG00005004736) #18	XPO7 (ENSBIXG00005027512) #19	NPM2 (ENSBIXG00005027463) #20	FGF17 (ENSBIXG00005027428) #21	DMTN (ENSBIXG00005027387) #22	FHIP2B (ENSBIXG00005004662) #23	NUDT18 (ENSBIXG00005027121) #24	HR (ENSBIXG00005027087) #25	REEP4 (ENSBIXG00005027035) #26	LGI3 (ENSBIXG00005004632) #27	SFTPC (ENSBIXG00005004620) #28	BMP1 (ENSBIXG00005026935) #29	PHYHIP (ENSBIXG00005026873) #30	POLR3D (ENSBIXG00005026850) #31	PIWIL2 (ENSBIXG00005026814) #32	SLC39A14 (ENSBIXG00005026763) #33	ENSBIXG00005026647	PPP3CC (ENSBIXG00005007253) #34	ENSBIXG00005026595	SORBS3 (ENSBIXG00005007094) #35
Cow	MODERN SPECIES	27	ENSBTAG00000035709	ENSBTAG00000050097	ENSBTAG00000047647	CNTNAP3 (ENSBTAG00000006446)	ENSBTAG00000055232	LPL (ENSBTAG00000012855)	ENSBTAG00000050508	SLC18A1 (ENSBTAG00000020788)	ATP6V1B2 (ENSBTAG00000018646)	LZTS1 (ENSBTAG00000000841)	GFRA2 (ENSBTAG00000020665) #17	DOK2 (ENSBTAG00000003341) #18	XPO7 (ENSBTAG00000047628) #19	NPM2 (ENSBTAG00000046918) #20	FGF17 (ENSBTAG00000046951) #21	DMTN (ENSBTAG00000045887) #22	FHIP2B (ENSBTAG00000014361) #23	NUDT18 (ENSBTAG00000003483) #24	HR (ENSBTAG00000012036) #25	REEP4 (ENSBTAG00000009504) #26	LGI3 (ENSBTAG00000004578) #27	SFTPC (ENSBTAG00000012560) #28	BMP1 (ENSBTAG00000000917) #29	PHYHIP (ENSBTAG00000015757) #30	POLR3D (ENSBTAG00000010036) #31	PIWIL2 (ENSBTAG00000015835) #32	SLC39A14 (ENSBTAG00000019225) #33	PPP3CC (ENSBTAG00000020133) #34	ENSBTAG00000052118	SORBS3 (ENSBTAG00000014401) #35	ENSBTAG00000054318
Bos_a	ANCESTRAL SPECIES	20				ENSGT00390000005569.x.a.a.b.c.a	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00960000190195	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.a.b.a.b.a.b
Domestic yak	MODERN SPECIES	26	ENSBGRG00000005772	ENSBGRG00000005789	ENSBGRG00000005820	ENSBGRG00000005839	LPL (ENSBGRG00000005883)	SLC18A1 (ENSBGRG00000005970)	ATP6V1B2 (ENSBGRG00000006044)	LZTS1 (ENSBGRG00000006103)	ENSBGRG00000006145	GFRA2 (ENSBGRG00000006183) #17	ENSBGRG00000006448	DOK2 (ENSBGRG00000006461) #18	ENSBGRG00000006491	XPO7 (ENSBGRG00000006557) #19	ENSBGRG00000007546 #20	DMTN (ENSBGRG00000007906) #22	FHIP2B (ENSBGRG00000008409) #23	NUDT18 (ENSBGRG00000008644) #24	HR (ENSBGRG00000008707) #25	ENSBGRG00000009214 #26	LGI3 (ENSBGRG00000009374) #27	SFTPC (ENSBGRG00000009528) #28	BMP1 (ENSBGRG00000009629) #29	PHYHIP (ENSBGRG00000009872) #30	POLR3D (ENSBGRG00000009942) #31	PIWIL2 (ENSBGRG00000010031) #32	SLC39A14 (ENSBGRG00000010379) #33	ENSBGRG00000010491	ENSBGRG00000010503	PPP3CC (ENSBGRG00000010542) #34	SORBS3 (ENSBGRG00000011774) #35
Wild yak	MODERN SPECIES	711										ENSBMUG00000012963	GFRA2 (ENSBMUG00000013030) #17	DOK2 (ENSBMUG00000013060) #18	XPO7 (ENSBMUG00000013112) #19	ENSBMUG00000013150 #20	FGF17 (ENSBMUG00000013164) #21	DMTN (ENSBMUG00000013290) #22	FHIP2B (ENSBMUG00000013336) #23	NUDT18 (ENSBMUG00000013352) #24	HR (ENSBMUG00000013431) #25	REEP4 (ENSBMUG00000013469) #26	LGI3 (ENSBMUG00000013504) #27	SFTPC (ENSBMUG00000013531) #28	BMP1 (ENSBMUG00000013561) #29	PHYHIP (ENSBMUG00000013577) #30	POLR3D (ENSBMUG00000013605) #31	PIWIL2 (ENSBMUG00000013694) #32	SLC39A14 (ENSBMUG00000013789) #33	ENSBMUG00000013801	PPP3CC (ENSBMUG00000013849) #34	ENSBMUG00000013918 #35	PDLIM2 (ENSBMUG00000013940) #36
American bison	MODERN SPECIES	3134			ENSBBBG00000003726	ENSBBBG00000003722	ENSBBBG00000014986	LPL (ENSBBBG00000014982)	SLC18A1 (ENSBBBG00000014957)	ATP6V1B2 (ENSBBBG00000000816)	LZTS1 (ENSBBBG00000000835)	ENSBBBG00000000857	GFRA2 (ENSBBBG00000000874) #17	DOK2 (ENSBBBG00000000963) #18	XPO7 (ENSBBBG00000000984) #19	ENSBBBG00000001063 #20	FGF17 (ENSBBBG00000001081) #21	DMTN (ENSBBBG00000001134) #22	ENSBBBG00000014717 #23	NUDT18 (ENSBBBG00000003572) #24	HR (ENSBBBG00000014703) #25	REEP4 (ENSBBBG00000014642) #26	LGI3 (ENSBBBG00000014605) #27	SFTPC (ENSBBBG00000014583) #28	BMP1 (ENSBBBG00000007131) #29	PHYHIP (ENSBBBG00000003417) #30	POLR3D (ENSBBBG00000003413) #31	PIWIL2 (ENSBBBG00000014530) #32	SLC39A14 (ENSBBBG00000014435) #33	ENSBBBG00000003310	PPP3CC (ENSBBBG00000003305) #34	SORBS3 (ENSBBBG00000014322) #35	PDLIM2 (ENSBBBG00000014228) #36
Siberian musk deer	MODERN SPECIES	327												DOK2 (ENSMMSG00000010558) #18	XPO7 (ENSMMSG00000010600) #19	ENSMMSG00000010856 #20	FGF17 (ENSMMSG00000010894) #21	DMTN (ENSMMSG00000010959) #22	FHIP2B (ENSMMSG00000011217) #23	NUDT18 (ENSMMSG00000011330) #24	HR (ENSMMSG00000011355) #25	REEP4 (ENSMMSG00000011428) #26	LGI3 (ENSMMSG00000011515) #27	SFTPC (ENSMMSG00000011604) #28	BMP1 (ENSMMSG00000011656) #29	PHYHIP (ENSMMSG00000011733) #30	ENSMMSG00000011764 #31	PIWIL2 (ENSMMSG00000011843) #32	ENSMMSG00000012076	SLC39A14 (ENSMMSG00000012106) #33	ENSMMSG00000012176	PPP3CC (ENSMMSG00000012197) #34	ENSMMSG00000012271
Yarkand deer	MODERN SPECIES	7							ENSCHYG00000018162	LPL (ENSCHYG00000018192)	SLC18A1 (ENSCHYG00000018318)	ATP6V1B2 (ENSCHYG00000019196)	LZTS1 (ENSCHYG00000019365)	GFRA2 (ENSCHYG00000019452) #17	DOK2 (ENSCHYG00000019715) #18	XPO7 (ENSCHYG00000019861) #19	ENSCHYG00000020884 #20	DMTN (ENSCHYG00000021222) #22	FHIP2B (ENSCHYG00000021666) #23	ENSCHYG00000021878	NUDT18 (ENSCHYG00000021938) #24	HR (ENSCHYG00000021972) #25	SFTPC (ENSCHYG00000022183) #28	REEP4 (ENSCHYG00000022326) #26	LGI3 (ENSCHYG00000022421) #27	BMP1 (ENSCHYG00000022502) #29	PHYHIP (ENSCHYG00000022914) #30	PIWIL2 (ENSCHYG00000023005) #32	SLC39A14 (ENSCHYG00000023550) #33	PPP3CC (ENSCHYG00000023801) #34	SORBS3 (ENSCHYG00000024528) #35	PDLIM2 (ENSCHYG00000024701) #36	C8orf58 (ENSCHYG00000024797) #37
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00680000101436	ENSGT00940000156591	ENSGT00390000012054.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35
Carnivora	ANCESTRAL SPECIES	5	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00680000101436	ENSGT00940000156591	ENSGT00390000012054.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000014814.a.b.a.b.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Felidae	ANCESTRAL SPECIES	4	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00940000156591	ENSGT00390000012054.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000014814.a.b.a.b.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Panthera	ANCESTRAL SPECIES	5	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00940000156591	ENSGT00390000012054.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000014814.a.b.a.b.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00390000001491.a	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00940000156591	ENSGT00390000012054.b	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000014814.a.b.a.b.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
leopard	MODERN SPECIES	49							SLC18A1 (ENSPPRG00000006173)	ATP6V1B2 (ENSPPRG00000006510)	LZTS1 (ENSPPRG00000007235)	RPL39L (ENSPPRG00000014890)	GFRA2 (ENSPPRG00000010497) #17	DOK2 (ENSPPRG00000010786) #18	XPO7 (ENSPPRG00000012647) #19	NPM2 (ENSPPRG00000022157) #20	FGF17 (ENSPPRG00000023654) #21	DMTN (ENSPPRG00000006498) #22	FHIP2B (ENSPPRG00000008179) #23	NUDT18 (ENSPPRG00000009203) #24	HR (ENSPPRG00000011318) #25	REEP4 (ENSPPRG00000011897) #26	LGI3 (ENSPPRG00000012959) #27	SFTPC (ENSPPRG00000014467) #28	BMP1 (ENSPPRG00000023468) #29	PHYHIP (ENSPPRG00000023170) #30	POLR3D (ENSPPRG00000022827) #31	PIWIL2 (ENSPPRG00000000518) #32	SLC39A14 (ENSPPRG00000000738) #33	PPP3CC (ENSPPRG00000003854) #34	SORBS3 (ENSPPRG00000006181) #35	PDLIM2 (ENSPPRG00000009469) #36	C8orf58 (ENSPPRG00000012102) #37
lion	MODERN SPECIES	4	HGSNAT (ENSPLOG00000001276)	INTS10 (ENSPLOG00000001243)	CSGALNACT1 (ENSPLOG00000001227)	SH2D4A (ENSPLOG00000001206)	PSD3 (ENSPLOG00000001112)	ENSPLOG00000001059	SLC18A1 (ENSPLOG00000000899)	ATP6V1B2 (ENSPLOG00000000762)	LZTS1 (ENSPLOG00000000739)	ENSPLOG00000000716	GFRA2 (ENSPLOG00000000666) #17	DOK2 (ENSPLOG00000000612) #18	XPO7 (ENSPLOG00000000524) #19	NPM2 (ENSPLOG00000000449) #20	FGF17 (ENSPLOG00000000423) #21	DMTN (ENSPLOG00000000304) #22	FHIP2B (ENSPLOG00000000224) #23	ENSPLOG00000004612	NUDT18 (ENSPLOG00000004601) #24	HR (ENSPLOG00000004589) #25	REEP4 (ENSPLOG00000004562) #26	LGI3 (ENSPLOG00000004530) #27	SFTPC (ENSPLOG00000004504) #28	BMP1 (ENSPLOG00000004473) #29	PHYHIP (ENSPLOG00000004438) #30	POLR3D (ENSPLOG00000004409) #31	PIWIL2 (ENSPLOG00000004359) #32	SLC39A14 (ENSPLOG00000004308) #33	PPP3CC (ENSPLOG00000004219) #34	SORBS3 (ENSPLOG00000004161) #35	PDLIM2 (ENSPLOG00000004126) #36
Tiger	MODERN SPECIES	446						LPL (ENSPTIG00000010158)	SLC18A1 (ENSPTIG00000010654)	ATP6V1B2 (ENSPTIG00000017651)	LZTS1 (ENSPTIG00000018077)	RPL39L (ENSPTIG00000000475)	GFRA2 (ENSPTIG00000019476) #17	DOK2 (ENSPTIG00000005334) #18	XPO7 (ENSPTIG00000006201) #19	NPM2 (ENSPTIG00000011553) #20	FGF17 (ENSPTIG00000017095) #21	DMTN (ENSPTIG00000018352) #22	FHIP2B (ENSPTIG00000013236) #23	ENSPTIG00000014358	NUDT18 (ENSPTIG00000014811) #24	HR (ENSPTIG00000015103) #25	REEP4 (ENSPTIG00000017415) #26	LGI3 (ENSPTIG00000018591) #27	SFTPC (ENSPTIG00000000868) #28	BMP1 (ENSPTIG00000008141) #29	PHYHIP (ENSPTIG00000017512) #30	POLR3D (ENSPTIG00000018239) #31	PIWIL2 (ENSPTIG00000019334) #32	SLC39A14 (ENSPTIG00000021976) #33	PPP3CC (ENSPTIG00000022097) #34	SORBS3 (ENSPTIG00000007552) #35	PDLIM2 (ENSPTIG00000010673) #36
Cat	MODERN SPECIES	235	CSGALNACT1 (ENSFCAG00000013402)	SH2D4A (ENSFCAG00000026624)	PSD3 (ENSFCAG00000033051)	ENSFCAG00000023846	LPL (ENSFCAG00000012161)	SLC18A1 (ENSFCAG00000011693)	ATP6V1B2 (ENSFCAG00000013380)	LZTS1 (ENSFCAG00000030368)	ENSFCAG00000044333	ENSFCAG00000053248	GFRA2 (ENSFCAG00000008963) #17	DOK2 (ENSFCAG00000008964) #18	XPO7 (ENSFCAG00000008965) #19	NPM2 (ENSFCAG00000045117) #20	FGF17 (ENSFCAG00000005496) #21	DMTN (ENSFCAG00000012976) #22	FHIP2B (ENSFCAG00000005001) #23	ENSFCAG00000035285	NUDT18 (ENSFCAG00000024534) #24	HR (ENSFCAG00000012978) #25	REEP4 (ENSFCAG00000041047) #26	LGI3 (ENSFCAG00000005286) #27	SFTPC (ENSFCAG00000004717) #28	BMP1 (ENSFCAG00000012979) #29	PHYHIP (ENSFCAG00000029013) #30	PIWIL2 (ENSFCAG00000012981) #32	SLC39A14 (ENSFCAG00000001452) #33	PPP3CC (ENSFCAG00000030895) #34	SORBS3 (ENSFCAG00000005663) #35	PDLIM2 (ENSFCAG00000005664) #36	CB1H8orf58 (ENSFCAG00000024843) #37
Caniformia	ANCESTRAL SPECIES	7						ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000014814.a.b.a.b.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Canidae	ANCESTRAL SPECIES	31		ENSGT00390000017888	ENSGT00390000004915.b	ENSGT00940000163095.a	ENSGT00940000154559.C	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000014814.a.b.a.b.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418.b #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Red fox	MODERN SPECIES	67										ENSVVUG00000010683	GFRA2 (ENSVVUG00000010642) #17	DOK2 (ENSVVUG00000010601) #18	XPO7 (ENSVVUG00000007346) #19	ENSVVUG00000007256 #20	FGF17 (ENSVVUG00000007248) #21	DMTN (ENSVVUG00000006438) #22	FAM160B2 (ENSVVUG00000006408) #23	NUDT18 (ENSVVUG00000006404) #24	HR (ENSVVUG00000006393) #25	REEP4 (ENSVVUG00000006388) #26	LGI3 (ENSVVUG00000006376) #27	SFTPC (ENSVVUG00000006345) #28	BMP1 (ENSVVUG00000005326) #29	PHYHIP (ENSVVUG00000005294) #30	POLR3D (ENSVVUG00000005290) #31	PIWIL2 (ENSVVUG00000005239) #32	SLC39A14 (ENSVVUG00000005212) #33	PPP3CC (ENSVVUG00000005197) #34	SORBS3 (ENSVVUG00000005170) #35	PDLIM2 (ENSVVUG00000005161) #36	CUNH8orf58 (ENSVVUG00000005160) #37
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00590000083134.a.b	ENSGT00390000017888	ENSGT00390000004915.b	ENSGT00940000163095.a	ENSGT00940000154559.C	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00390000014814.a.b.a.b.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418.b #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Dog	MODERN SPECIES	17	ENSCAFG00845014653	FBXO25 (ENSCAFG00845014586)	ENSCAFG00845029573	ENSCAFG00845029507	C8H14orf119 (ENSCAFG00845029484)	LPL (ENSCAFG00845029377)	SLC18A1 (ENSCAFG00845029212)	ATP6V1B2 (ENSCAFG00845029095)	LZTS1 (ENSCAFG00845029013)	ENSCAFG00845028943	GFRA2 (ENSCAFG00845028779) #17	DOK2 (ENSCAFG00845028659) #18	XPO7 (ENSCAFG00845028066) #19	NPM2 (ENSCAFG00845027762) #20	FGF17 (ENSCAFG00845027641) #21	DMTN (ENSCAFG00845027302) #22	FHIP2B (ENSCAFG00845027044) #23	NUDT18 (ENSCAFG00845026962) #24	HR (ENSCAFG00845026480) #25	REEP4 (ENSCAFG00845026054) #26	LGI3 (ENSCAFG00845025793) #27	SFTPC (ENSCAFG00845025534) #28	BMP1 (ENSCAFG00845025214) #29	PHYHIP (ENSCAFG00845025085) #30	POLR3D (ENSCAFG00845024956) #31	PIWIL2 (ENSCAFG00845024208) #32	SLC39A14 (ENSCAFG00845023697) #33	PPP3CC (ENSCAFG00845022916) #34	SORBS3 (ENSCAFG00845020887) #35	PDLIM2 (ENSCAFG00845020425) #36	C8orf58 (ENSCAFG00845020195) #37
Dingo	MODERN SPECIES	304	TDRP (ENSCAFG00020018532)	FBXO25 (ENSCAFG00020018524)	ENSCAFG00020018515	ZNF596 (ENSCAFG00020018508)	LPL (ENSCAFG00020018506)	ENSCAFG00020018495	SLC18A1 (ENSCAFG00020018469)	ATP6V1B2 (ENSCAFG00020018462)	LZTS1 (ENSCAFG00020018457)	ENSCAFG00020018445	GFRA2 (ENSCAFG00020018439) #17	DOK2 (ENSCAFG00020018434) #18	XPO7 (ENSCAFG00020017954) #19	ENSCAFG00020017926 #20	FGF17 (ENSCAFG00020017919) #21	DMTN (ENSCAFG00020017901) #22	FHIP2B (ENSCAFG00020017889) #23	NUDT18 (ENSCAFG00020017886) #24	HR (ENSCAFG00020017876) #25	REEP4 (ENSCAFG00020017868) #26	LGI3 (ENSCAFG00020017857) #27	SFTPC (ENSCAFG00020017847) #28	BMP1 (ENSCAFG00020013181) #29	PHYHIP (ENSCAFG00020013035) #30	POLR3D (ENSCAFG00020013027) #31	PIWIL2 (ENSCAFG00020012983) #32	SLC39A14 (ENSCAFG00020012975) #33	PPP3CC (ENSCAFG00020012963) #34	SORBS3 (ENSCAFG00020012942) #35	PDLIM2 (ENSCAFG00020012938) #36	C8orf58 (ENSCAFG00020012932) #37
Caniformia_b	ANCESTRAL SPECIES	5							ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Mustelinae	ANCESTRAL SPECIES	104								ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
American mink	MODERN SPECIES	232											GFRA2 (ENSNVIG00000021644) #17	DOK2 (ENSNVIG00000021708) #18	XPO7 (ENSNVIG00000021720) #19	ENSNVIG00000021778 #20	FGF17 (ENSNVIG00000021804) #21	DMTN (ENSNVIG00000021828) #22	FHIP2B (ENSNVIG00000022065) #23	ENSNVIG00000022085	NUDT18 (ENSNVIG00000022088) #24	HR (ENSNVIG00000022103) #25	REEP4 (ENSNVIG00000022169) #26	LGI3 (ENSNVIG00000022182) #27	SFTPC (ENSNVIG00000022200) #28	BMP1 (ENSNVIG00000022366) #29	PHYHIP (ENSNVIG00000023396) #30	RPC4 (ENSNVIG00000023399) #31	PIWIL2 (ENSNVIG00000023401) #32	SLC39A14 (ENSNVIG00000023412) #33	PPP3CC (ENSNVIG00000023435) #34	VINEX (ENSNVIG00000023464) #35	PDLIM2 (ENSNVIG00000023477) #36
Ferret	MODERN SPECIES	256							SLC18A1 (ENSMPUG00000004281)	ATP6V1B2 (ENSMPUG00000004276)	LZTS1 (ENSMPUG00000004268)	ENSMPUG00000018764	GFRA2 (ENSMPUG00000004261) #17	DOK2 (ENSMPUG00000004250) #18	ENSMPUG00000004061 #19	NPM2 (ENSMPUG00000004012) #20	FGF17 (ENSMPUG00000004006) #21	DMTN (ENSMPUG00000003994) #22	FHIP2B (ENSMPUG00000003986) #23	NUDT18 (ENSMPUG00000003980) #24	HR (ENSMPUG00000003967) #25	REEP4 (ENSMPUG00000003921) #26	LGI3 (ENSMPUG00000003913) #27	SFTPC (ENSMPUG00000003875) #28	BMP1 (ENSMPUG00000003668) #29	PHYHIP (ENSMPUG00000003661) #30	POLR3D (ENSMPUG00000003653) #31	PIWIL2 (ENSMPUG00000003645) #32	SLC39A14 (ENSMPUG00000003640) #33	PPP3CC (ENSMPUG00000003630) #34	SORBS3 (ENSMPUG00000003610) #35	PDLIM2 (ENSMPUG00000003539) #36	C8orf58 (ENSMPUG00000003516) #37
Ursidae	ANCESTRAL SPECIES	50							ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Giant Panda	MODERN SPECIES	15	PTK2B (ENSAMEG00000000174)	ENSAMEG00000000207	ENSAMEG00000000209	ENSAMEG00000026433	ENSAMEG00000031090	ENSAMEG00000005638	ENSAMEG00000000943	SLC18A1 (ENSAMEG00000012721)	ATP6V1B2 (ENSAMEG00000012668)	LZTS1 (ENSAMEG00000012664)	GFRA2 (ENSAMEG00000003691) #17	DOK2 (ENSAMEG00000003671) #18	XPO7 (ENSAMEG00000003555) #19	NPM2 (ENSAMEG00000003542) #20	FGF17 (ENSAMEG00000003531) #21	DMTN (ENSAMEG00000003459) #22	FHIP2B (ENSAMEG00000003424) #23	NUDT18 (ENSAMEG00000003416) #24	HR (ENSAMEG00000003382) #25	REEP4 (ENSAMEG00000003360) #26	LGI3 (ENSAMEG00000029058) #27	SFTPC (ENSAMEG00000003331) #28	BMP1 (ENSAMEG00000003243) #29	PHYHIP (ENSAMEG00000028003) #30	POLR3D (ENSAMEG00000003221) #31	PIWIL2 (ENSAMEG00000003171) #32	SLC39A14 (ENSAMEG00000003151) #33	PPP3CC (ENSAMEG00000003134) #34	PDLIM2 (ENSAMEG00000003082) #36	C8orf58 (ENSAMEG00000003077) #37	CCAR2 (ENSAMEG00000003044)
Ursus	ANCESTRAL SPECIES	126											ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00910000146927	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Polar bear	MODERN SPECIES	242												GFRA2 (ENSUMAG00000006969) #17	DOK2 (ENSUMAG00000006961) #18	XPO7 (ENSUMAG00000006951) #19	FGF17 (ENSUMAG00000006942) #21	DMTN (ENSUMAG00000006849) #22	FHIP2B (ENSUMAG00000006785) #23	ENSUMAG00000006781	NUDT18 (ENSUMAG00000006779) #24	HR (ENSUMAG00000006422) #25	REEP4 (ENSUMAG00000006361) #26	LGI3 (ENSUMAG00000006351) #27	SFTPC (ENSUMAG00000006331) #28	BMP1 (ENSUMAG00000005269) #29	PHYHIP (ENSUMAG00000005113) #30	POLR3D (ENSUMAG00000005099) #31	PIWIL2 (ENSUMAG00000005016) #32	SLC39A14 (ENSUMAG00000005010) #33	PPP3CC (ENSUMAG00000004979) #34	SORBS3 (ENSUMAG00000004804) #35	PDLIM2 (ENSUMAG00000004787) #36
American black bear	MODERN SPECIES	1710												DOK2 (ENSUAMG00000006327) #18	XPO7 (ENSUAMG00000003008) #19	ENSUAMG00000002809 #20	FGF17 (ENSUAMG00000002793) #21	DMTN (ENSUAMG00000002772) #22	ENSUAMG00000002741 #23
Laurasiatheria_c	ANCESTRAL SPECIES	8							ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Chiroptera	ANCESTRAL SPECIES	64								ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Microchiroptera	ANCESTRAL SPECIES	57								ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Microbat	MODERN SPECIES	1265																DMTN (ENSMLUG00000002049) #22	FHIP2B (ENSMLUG00000002058) #23	NUDT18 (ENSMLUG00000002066) #24	HR (ENSMLUG00000002079) #25	REEP4 (ENSMLUG00000022968) #26	LGI3 (ENSMLUG00000029448) #27	SFTPC (ENSMLUG00000002090) #28	BMP1 (ENSMLUG00000002093) #29	PHYHIP (ENSMLUG00000002104) #30	POLR3D (ENSMLUG00000002109) #31	PIWIL2 (ENSMLUG00000002115) #32	SLC39A14 (ENSMLUG00000010611) #33	PPP3CC (ENSMLUG00000007839) #34	SORBS3 (ENSMLUG00000007889) #35	PDLIM2 (ENSMLUG00000007918) #36	C8orf58 (ENSMLUG00000026541) #37
Greater horseshoe bat	MODERN SPECIES	9	TRIM75 (ENSRFEG00010014895)	ENSRFEG00010014876	ENSRFEG00010014823	ENSRFEG00010014772	ENSRFEG00010014714	SMIM31 (ENSRFEG00010014668)	SLC18A1 (ENSRFEG00010014560)	ENSRFEG00010014532	ATP6V1B2 (ENSRFEG00010013734)	LZTS1 (ENSRFEG00010013630)	GFRA2 (ENSRFEG00010013383) #17	DOK2 (ENSRFEG00010013330) #18	XPO7 (ENSRFEG00010012873) #19	NPM2 (ENSRFEG00010012630) #20	FGF17 (ENSRFEG00010012478) #21	DMTN (ENSRFEG00010012301) #22	ENSRFEG00010012231	FHIP2B (ENSRFEG00010012158) #23	NUDT18 (ENSRFEG00010012081) #24	HR (ENSRFEG00010011989) #25	REEP4 (ENSRFEG00010011723) #26	LGI3 (ENSRFEG00010011663) #27	SFTPC (ENSRFEG00010011568) #28	BMP1 (ENSRFEG00010011473) #29	PHYHIP (ENSRFEG00010011436) #30	POLR3D (ENSRFEG00010011381) #31	PIWIL2 (ENSRFEG00010010461) #32	SLC39A14 (ENSRFEG00010010103) #33	PPP3CC (ENSRFEG00010009663) #34	SORBS3 (ENSRFEG00010009553) #35	ENSRFEG00010009418 #36
Megabat	MODERN SPECIES	1628												DOK2 (ENSPVAG00000009846) #18	XPO7 (ENSPVAG00000009847) #19	NPM2 (ENSPVAG00000009848) #20	FGF17 (ENSPVAG00000009849) #21	DMTN (ENSPVAG00000009850) #22	FHIP2B (ENSPVAG00000009854) #23	NUDT18 (ENSPVAG00000009857) #24	HR (ENSPVAG00000009862) #25	REEP4 (ENSPVAG00000009864) #26	LGI3 (ENSPVAG00000009867) #27	SFTPC (ENSPVAG00000009868) #28	BMP1 (ENSPVAG00000009870) #29	PHYHIP (ENSPVAG00000009872) #30	POLR3D (ENSPVAG00000009873) #31	PIWIL2 (ENSPVAG00000009878) #32	SLC39A14 (ENSPVAG00000009882) #33
Equus	ANCESTRAL SPECIES	24							ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT01090000263470	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Horse	MODERN SPECIES	11	PLEKHN1 (ENSECAG00000022981)	KLHL17 (ENSECAG00000023217)	NOC2L (ENSECAG00000023976)	SAMD11 (ENSECAG00000007281)	ENSECAG00000058610	LPL (ENSECAG00000010145)	SLC18A1 (ENSECAG00000013343)	ATP6V1B2 (ENSECAG00000016500)	LZTS1 (ENSECAG00000020112)	ENSECAG00000047927	GFRA2 (ENSECAG00000020585) #17	DOK2 (ENSECAG00000023145) #18	XPO7 (ENSECAG00000023304) #19	NPM2 (ENSECAG00000024685) #20	FGF17 (ENSECAG00000024690) #21	DMTN (ENSECAG00000000791) #22	FHIP2B (ENSECAG00000009459) #23	NUDT18 (ENSECAG00000010645) #24	HR (ENSECAG00000010917) #25	REEP4 (ENSECAG00000015249) #26	LGI3 (ENSECAG00000020126) #27	SFTPC (ENSECAG00000021053) #28	BMP1 (ENSECAG00000021675) #29	PHYHIP (ENSECAG00000025002) #30	ENSECAG00000025090 #31	PIWIL2 (ENSECAG00000025128) #32	SLC39A14 (ENSECAG00000008287) #33	PPP3CC (ENSECAG00000009540) #34	SORBS3 (ENSECAG00000017281) #35	PDLIM2 (ENSECAG00000019910) #36	C2H8orf58 (ENSECAG00000020618) #37
Donkey	MODERN SPECIES	22					ENSEASG00005029137	ENSEASG00005026691	ENSEASG00005018875	SLC18A1 (ENSEASG00005018869)	ATP6V1B2 (ENSEASG00005018867)	LZTS1 (ENSEASG00005018865)	GFRA2 (ENSEASG00005018862) #17	DOK2 (ENSEASG00005026291) #18	XPO7 (ENSEASG00005018857) #19	NPM2 (ENSEASG00005018856) #20	FGF17 (ENSEASG00005026523) #21	DMTN (ENSEASG00005037455) #22	FHIP2B (ENSEASG00005018846) #23	NUDT18 (ENSEASG00005034487) #24	HR (ENSEASG00005018840) #25	HRURF (ENSEASG00005024739)	REEP4 (ENSEASG00005018837) #26	LGI3 (ENSEASG00005018833) #27	ENSEASG00005018830 #28	BMP1 (ENSEASG00005018828) #29	PHYHIP (ENSEASG00005030820) #30	POLR3D (ENSEASG00005018824) #31	PIWIL2 (ENSEASG00005018819) #32	SLC39A14 (ENSEASG00005018817) #33	PPP3CC (ENSEASG00005018811) #34	SORBS3 (ENSEASG00005018804) #35	PDLIM2 (ENSEASG00005018800) #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000182850.a.b.b #22
Hedgehog	MODERN SPECIES	5228																ENSEEUG00000006910 #22
Common shrew	MODERN SPECIES	4039																ENSSARG00000012233 #22
Atlantogenata	ANCESTRAL SPECIES	23	ENSGT00390000001491.a	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00940000156591	ENSGT00390000012054.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Xenarthra	ANCESTRAL SPECIES	135													ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00390000000531 #37	ENSGT00530000063672.b	ENSGT00950000182882.B
Armadillo	MODERN SPECIES	1711													DOK2 (ENSDNOG00000044342) #18	XPO7 (ENSDNOG00000017937) #19	FGF17 (ENSDNOG00000037487) #21	DMTN (ENSDNOG00000031187) #22	FHIP2B (ENSDNOG00000030832) #23	NUDT18 (ENSDNOG00000048317) #24	HR (ENSDNOG00000003547) #25	REEP4 (ENSDNOG00000048348) #26	LGI3 (ENSDNOG00000042666) #27	SFTPC (ENSDNOG00000043253) #28	BMP1 (ENSDNOG00000047830) #29	PHYHIP (ENSDNOG00000041995) #30	POLR3D (ENSDNOG00000013488) #31	PIWIL2 (ENSDNOG00000001468) #32	ENSDNOG00000018834 #33	PPP3CC (ENSDNOG00000045047) #34	C8orf58 (ENSDNOG00000019559) #37	CCAR2 (ENSDNOG00000019561)	BIN3 (ENSDNOG00000019565)
Afrotheria	ANCESTRAL SPECIES	19	ENSGT00390000001491.a	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00940000156591	ENSGT00390000012054.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Afrotheria_a	ANCESTRAL SPECIES	18	ENSGT00390000001491.a	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00940000156591	ENSGT00390000012054.b	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Hyrax	MODERN SPECIES	4308																ENSPCAG00000001352 #22	FHIP2B (ENSPCAG00000001473) #23	NUDT18 (ENSPCAG00000001573) #24	HR (ENSPCAG00000001677) #25	REEP4 (ENSPCAG00000001766) #26	LGI3 (ENSPCAG00000001791) #27	SFTPC (ENSPCAG00000001831) #28	BMP1 (ENSPCAG00000001856) #29	PHYHIP (ENSPCAG00000001949) #30	POLR3D (ENSPCAG00000001971) #31
Elephant	MODERN SPECIES	225	INTS10 (ENSLAFG00000013793)	CSGALNACT1 (ENSLAFG00000003525)	SH2D4A (ENSLAFG00000014647)	ENSLAFG00000014210	ENSLAFG00000031466	ENSLAFG00000031216	LPL (ENSLAFG00000005641)	SLC18A1 (ENSLAFG00000002491)	ATP6V1B2 (ENSLAFG00000008691)	LZTS1 (ENSLAFG00000008693)	GFRA2 (ENSLAFG00000007783) #17	DOK2 (ENSLAFG00000022377) #18	XPO7 (ENSLAFG00000011775) #19	NPM2 (ENSLAFG00000015584) #20	FGF17 (ENSLAFG00000004359) #21	DMTN (ENSLAFG00000015593) #22	FHIP2B (ENSLAFG00000013319) #23	NUDT18 (ENSLAFG00000015609) #24	HR (ENSLAFG00000010818) #25	REEP4 (ENSLAFG00000001522) #26	LGI3 (ENSLAFG00000018409) #27	BMP1 (ENSLAFG00000018416) #29	PHYHIP (ENSLAFG00000001561) #30	POLR3D (ENSLAFG00000001562) #31	PIWIL2 (ENSLAFG00000016420) #32	SLC39A14 (ENSLAFG00000016429) #33	PPP3CC (ENSLAFG00000018447) #34	SORBS3 (ENSLAFG00000018449) #35	PDLIM2 (ENSLAFG00000018454) #36	C8orf58 (ENSLAFG00000018457) #37	CCAR2 (ENSLAFG00000018459)
Tenrec	MODERN SPECIES	5041																ENSETEG00000002902 #22	FHIP2B (ENSETEG00000002913) #23	NUDT18 (ENSETEG00000002918) #24	LGI3 (ENSETEG00000002923) #27	SFTPC (ENSETEG00000002926) #28	BMP1 (ENSETEG00000002930) #29	PHYHIP (ENSETEG00000002936) #30
Marsupialia	ANCESTRAL SPECIES	19	ENSGT00390000001491.a	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00940000156591	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT00390000001491.a	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00940000156591	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT00390000001491.a	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00940000156591	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT00390000001491.a	ENSGT00390000010950	ENSGT01050000244968.c	ENSGT00940000157357	ENSGT00940000156591	ENSGT00940000157178	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00390000000531 #37
koala	MODERN SPECIES	277										GFRA2 (ENSPCIG00000031866) #17	DOK2 (ENSPCIG00000015158) #18	XPO7 (ENSPCIG00000012732) #19	ENSPCIG00000012717	ENSPCIG00000012716 #20	FGF17 (ENSPCIG00000012714) #21	DMTN (ENSPCIG00000012711) #22	FHIP2B (ENSPCIG00000012710) #23	NUDT18 (ENSPCIG00000036571) #24	HR (ENSPCIG00000012707) #25	REEP4 (ENSPCIG00000012706) #26	LGI3 (ENSPCIG00000012704) #27	SFTPC (ENSPCIG00000012702) #28	BMP1 (ENSPCIG00000012701) #29	PHYHIP (ENSPCIG00000030700) #30	POLR3D (ENSPCIG00000012699) #31	PIWIL2 (ENSPCIG00000012698) #32	SLC39A14 (ENSPCIG00000012697) #33	PPP3CC (ENSPCIG00000005913) #34	SORBS3 (ENSPCIG00000005845) #35	PDLIM2 (ENSPCIG00000005839) #36	CCAR2 (ENSPCIG00000004974)
Common wonbat	MODERN SPECIES	1017	INTS10 (ENSVURG00010008514)	CSGALNACT1 (ENSVURG00010008485)	SH2D4A (ENSVURG00010008445)	ENSVURG00010008407	PSD3 (ENSVURG00010008355)	LPL (ENSVURG00010008260)	SLC18A1 (ENSVURG00010008125)	ATP6V1B2 (ENSVURG00010008078)	LZTS1 (ENSVURG00010008069)	GFRA2 (ENSVURG00010008027) #17	DOK2 (ENSVURG00010008006) #18	XPO7 (ENSVURG00010007924) #19	PBDC1 (ENSVURG00010007898)	ENSVURG00010007885 #20	FGF17 (ENSVURG00010007869) #21	DMTN (ENSVURG00010007703) #22	FHIP2B (ENSVURG00010007686) #23	NUDT18 (ENSVURG00010007677) #24	HR (ENSVURG00010007655) #25	ENSVURG00010007641 #26	LGI3 (ENSVURG00010007630) #27	SFTPC (ENSVURG00010007615) #28	BMP1 (ENSVURG00010007562) #29
Wallaby	MODERN SPECIES	6366																ENSMEUG00000004339 #22
Tasmanian devil	MODERN SPECIES	1	SH2D4A (ENSSHAG00000018885)	ENSSHAG00000018917	ENSSHAG00000030296	ENSSHAG00000002224	ENSSHAG00000008136	ENSSHAG00000010177	ATP6V1B2 (ENSSHAG00000010514)	LZTS1 (ENSSHAG00000021772)	GFRA2 (ENSSHAG00000017337) #17	ENSSHAG00000026343	DOK2 (ENSSHAG00000017704) #18	XPO7 (ENSSHAG00000017833) #19	ENSSHAG00000017872	ENSSHAG00000020976 #20	FGF17 (ENSSHAG00000017897) #21	DMTN (ENSSHAG00000017939) #22	FHIP2B (ENSSHAG00000018000) #23	NUDT18 (ENSSHAG00000024058) #24	HR (ENSSHAG00000018060) #25	REEP4 (ENSSHAG00000018091) #26	LGI3 (ENSSHAG00000018114) #27	SFTPC (ENSSHAG00000018137) #28	BMP1 (ENSSHAG00000018145) #29	PHYHIP (ENSSHAG00000018216) #30	PIWIL2 (ENSSHAG00000023576) #32	SLC39A14 (ENSSHAG00000018386) #33	PPP3CC (ENSSHAG00000018431) #34	SORBS3 (ENSSHAG00000018540) #35	PDLIM2 (ENSSHAG00000032312) #36	CCAR2 (ENSSHAG00000018601)	BIN3 (ENSSHAG00000018614)
Opossum	MODERN SPECIES		CSGALNACT1 (ENSMODG00000009932)	SH2D4A (ENSMODG00000009920)	ENSMODG00000009906	PSD3 (ENSMODG00000009897)	LPL (ENSMODG00000009888)	SLC18A1 (ENSMODG00000009840)	ATP6V1B2 (ENSMODG00000009825)	ENSMODG00000009807	LZTS1 (ENSMODG00000009800)	GFRA2 (ENSMODG00000009785) #17	DOK2 (ENSMODG00000045530) #18	XPO7 (ENSMODG00000009741) #19	ENSMODG00000009685	ENSMODG00000009677 #20	FGF17 (ENSMODG00000009670) #21	DMTN (ENSMODG00000009660) #22	FHIP2B (ENSMODG00000009642) #23	ENSMODG00000009619 #24	HR (ENSMODG00000009614) #25	REEP4 (ENSMODG00000009592) #26	LGI3 (ENSMODG00000009582) #27	SFTPC (ENSMODG00000009553) #28	ENSMODG00000045526 #29	PHYHIP (ENSMODG00000009502) #30	POLR3D (ENSMODG00000009491) #31	PIWIL2 (ENSMODG00000009482) #32	SLC39A14 (ENSMODG00000009443) #33	PPP3CC (ENSMODG00000009426) #34	ENSMODG00000009368 #35	ENSMODG00000045734 #35	PDLIM2 (ENSMODG00000009355) #36
Platypus	MODERN SPECIES	16	ZNF703 (ENSOANG00000042203)	KCNU1 (ENSOANG00000001328)	UNC5D (ENSOANG00000009393)	DUSP26 (ENSOANG00000002390)	ENSOANG00000002393	MAK16 (ENSOANG00000002395)	SLC18A1 (ENSOANG00000010571)	ATP6V1B2 (ENSOANG00000010576)	LZTS1 (ENSOANG00000010581)	GFRA2 (ENSOANG00000013182) #17	DOK2 (ENSOANG00000013185) #18	XPO7 (ENSOANG00000013334) #19	ENSOANG00000013333	ENSOANG00000020262 #20	FGF17 (ENSOANG00000001339) #21	DMTN (ENSOANG00000048167) #22	FHIP2B (ENSOANG00000007141) #23	ENSOANG00000046429 #24	HR (ENSOANG00000001145) #25	REEP4 (ENSOANG00000001144) #26	LGI3 (ENSOANG00000042263) #27	SFTPC (ENSOANG00000036115) #28	BMP1 (ENSOANG00000010775) #29	POLR3D (ENSOANG00000010776) #31	PIWIL2 (ENSOANG00000010778) #32	SLC39A14 (ENSOANG00000010779) #33	PPP3CC (ENSOANG00000010781) #34	ENSOANG00000010782 #35	PDLIM2 (ENSOANG00000010783) #36	ENSOANG00000044232 #37	CCAR2 (ENSOANG00000009829)
Sauria	ANCESTRAL SPECIES	27	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT00390000017162.c.b #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Archelosauria	ANCESTRAL SPECIES	29	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT00390000017162.c.b #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Cryptodira	ANCESTRAL SPECIES	30	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT00390000017162.c.b #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Testudinoidea	ANCESTRAL SPECIES		ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00940000153664.A.b.a	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Emydidae	ANCESTRAL SPECIES		ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00940000153664.A.b.a	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Three-toed box turtle	MODERN SPECIES	20	UNC5D (ENSTMTG00000001187)	DUSP26 (ENSTMTG00000001154)	RNF122 (ENSTMTG00000001140)	TTI2 (ENSTMTG00000001115)	MAK16 (ENSTMTG00000001096)	SLC18A1 (ENSTMTG00000001018)	ATP6V1B2 (ENSTMTG00000000992)	LZTS1 (ENSTMTG00000000971)	GFRA2 (ENSTMTG00000000955) #17	DOK2 (ENSTMTG00000000945) #18	ENSTMTG00000000934	XPO7 (ENSTMTG00000000906) #19	PBDC1 (ENSTMTG00000000888)	NPM2 (ENSTMTG00000000852) #20	FGF17 (ENSTMTG00000000826) #21	DMTN (ENSTMTG00000000805) #22	FHIP2B (ENSTMTG00000000777) #23	NUDT18 (ENSTMTG00000000766) #24	HR (ENSTMTG00000000738) #25	REEP4 (ENSTMTG00000000716) #26	LGI3 (ENSTMTG00000000703) #27	ENSTMTG00000000676 #28	ENSTMTG00000000652 #28	ENSTMTG00000000631	BMP1 (ENSTMTG00000000601) #29	PHYHIP (ENSTMTG00000000529) #30	POLR3D (ENSTMTG00000000509) #31	ENSTMTG00000000498	PIWIL2 (ENSTMTG00000000458) #32	SLC39A14 (ENSTMTG00000000405) #33	PPP3CC (ENSTMTG00000000333) #34
painted turtle	MODERN SPECIES	709		DUSP26 (ENSCPBG00000000135)	RNF122 (ENSCPBG00000000141)	TTI2 (ENSCPBG00000000155)	MAK16 (ENSCPBG00000000176)	SLC18A1 (ENSCPBG00000000219)	ATP6V1B2 (ENSCPBG00000000443)	LZTS1 (ENSCPBG00000000471)	GFRA2 (ENSCPBG00000000574) #17	ENSCPBG00000000613	DOK2 (ENSCPBG00000000627) #18	ENSCPBG00000000653	XPO7 (ENSCPBG00000000811) #19	PBDC1 (ENSCPBG00000000856)	FGF17 (ENSCPBG00000000869) #21	DMTN (ENSCPBG00000000901) #22	ENSCPBG00000000930	FHIP2B (ENSCPBG00000000953) #23	NUDT18 (ENSCPBG00000000974) #24	HR (ENSCPBG00000001011) #25	REEP4 (ENSCPBG00000001072) #26	LGI3 (ENSCPBG00000001091) #27	SFTPC (ENSCPBG00000001112) #28	BMP1 (ENSCPBG00000001275) #29	PHYHIP (ENSCPBG00000001301) #30	POLR3D (ENSCPBG00000001313) #31	ENSCPBG00000001327	PIWIL2 (ENSCPBG00000001412) #32	PPP3CC (ENSCPBG00000002099) #34	SORBS3 (ENSCPBG00000002187) #35	PDLIM2 (ENSCPBG00000002239) #36
Testudinidae	ANCESTRAL SPECIES	31	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00940000153664.A.b.a	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36
Abingdon island giant tortoise	MODERN SPECIES	2155								GFRA2 (ENSCABG00000017883) #17	DOK2 (ENSCABG00000017882) #18	ENSCABG00000017881	XPO7 (ENSCABG00000017880) #19	PBDC1 (ENSCABG00000017879)	ENSCABG00000017878	NPM2 (ENSCABG00000017877) #20	FGF17 (ENSCABG00000017876) #21	DMTN (ENSCABG00000017875) #22	FHIP2B (ENSCABG00000017874) #23	NUDT18 (ENSCABG00000017873) #24	HR (ENSCABG00000017872) #25	REEP4 (ENSCABG00000017871) #26	LGI3 (ENSCABG00000017868) #27	SFTPC (ENSCABG00000017866) #28	ENSCABG00000017865	BMP1 (ENSCABG00000017863) #29	PHYHIP (ENSCABG00000017861) #30	POLR3D (ENSCABG00000017860) #31	PIWIL2 (ENSCABG00000017853) #32	SLC39A14 (ENSCABG00000017842) #33	PPP3CC (ENSCABG00000017839) #34	SORBS3 (ENSCABG00000017830) #35	PDLIM2 (ENSCABG00000017824) #36
Goode s thornscrub tortoise	MODERN SPECIES	11	UNC5D (ENSGEVG00005000704)	DUSP26 (ENSGEVG00005000631)	RNF122 (ENSGEVG00005000577)	TTI2 (ENSGEVG00005000553)	MAK16 (ENSGEVG00005000537)	SLC18A1 (ENSGEVG00005000492)	ATP6V1B2 (ENSGEVG00005000461)	LZTS1 (ENSGEVG00005000439)	GFRA2 (ENSGEVG00005000408) #17	DOK2 (ENSGEVG00005000377) #18	ENSGEVG00005000260	XPO7 (ENSGEVG00005000138) #19	PBDC1 (ENSGEVG00005000047)	NPM2 (ENSGEVG00005000034) #20	FGF17 (ENSGEVG00005016742) #21	DMTN (ENSGEVG00005016695) #22	FHIP2B (ENSGEVG00005016640) #23	NUDT18 (ENSGEVG00005016609) #24	HR (ENSGEVG00005016448) #25	REEP4 (ENSGEVG00005016410) #26	LGI3 (ENSGEVG00005016349) #27	SFTPC (ENSGEVG00005016167) #28	BMP1 (ENSGEVG00005016111) #29	PHYHIP (ENSGEVG00005016066) #30	POLR3D (ENSGEVG00005015982) #31	ENSGEVG00005015965	PIWIL2 (ENSGEVG00005014769) #32	SLC39A14 (ENSGEVG00005014596) #33	PPP3CC (ENSGEVG00005013454) #34	SORBS3 (ENSGEVG00005013229) #35	PDLIM2 (ENSGEVG00005013179) #36
Chinese turtle	MODERN SPECIES	2051										GFRA2 (ENSPSIG00000007859) #17	DOK2 (ENSPSIG00000007817) #18	XPO7 (ENSPSIG00000007802) #19	PBDC1 (ENSPSIG00000007778)	NPM2 (ENSPSIG00000007722) #20	FGF17 (ENSPSIG00000007719) #21	DMTN (ENSPSIG00000007271) #22	FHIP2B (ENSPSIG00000007260) #23	NUDT18 (ENSPSIG00000007241) #24	HR (ENSPSIG00000007041) #25	REEP4 (ENSPSIG00000006851) #26	LGI3 (ENSPSIG00000006794) #27	ENSPSIG00000006755 #28	ENSPSIG00000006638 #28	BMP1 (ENSPSIG00000006192) #29	PHYHIP (ENSPSIG00000006158) #30	POLR3D (ENSPSIG00000006113) #31	ENSPSIG00000001643	ENSPSIG00000005850	SLC39A14 (ENSPSIG00000005712) #33	PPP3CC (ENSPSIG00000018086) #34	ENSPSIG00000018078 #35
Archosauria	ANCESTRAL SPECIES	30	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00950000185549
Australian saltwater crocodile	MODERN SPECIES	51	KCNU1 (ENSCPRG00005002858)	UNC5D (ENSCPRG00005002796)	DUSP26 (ENSCPRG00005002787)	RNF122 (ENSCPRG00005002779)	TTI2 (ENSCPRG00005002772)	MAK16 (ENSCPRG00005002746)	SLC18A1 (ENSCPRG00005002726)	ATP6V1B2 (ENSCPRG00005002451)	LZTS1 (ENSCPRG00005002415)	ENSCPRG00005002409 #17	DOK2 (ENSCPRG00005002405) #18	XPO7 (ENSCPRG00005002400) #19	PBDC1 (ENSCPRG00005002392)	NPM2 (ENSCPRG00005002385) #20	FGF17 (ENSCPRG00005002380) #21	DMTN (ENSCPRG00005002215) #22	NUDT18 (ENSCPRG00005002184) #24	PLPBP (ENSCPRG00005002179)	ADGRA2 (ENSCPRG00005001808)	ENSCPRG00005001782 #17	ENSCPRG00005001777	EIF4EBP1 (ENSCPRG00005001774)	ENSCPRG00005001771	ASH2L (ENSCPRG00005001645)	STAR (ENSCPRG00005001620)	ENSCPRG00005001522	LSM1 (ENSCPRG00005001504)	BAG4 (ENSCPRG00005001476)	ENSCPRG00005001463	DDHD2 (ENSCPRG00005001384)	PLPP5 (ENSCPRG00005001370)
Aves	ANCESTRAL SPECIES	30	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00950000185549
Neognathae	ANCESTRAL SPECIES	33	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT01030000235403	ENSGT00940000157176.h #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558.b #35	ENSGT00940000160558.a #35
Galloanserae	ANCESTRAL SPECIES	32	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558.b #35	ENSGT00940000160558.a #35	ENSGT00940000160418.l #36	ENSGT00950000185549	ENSGT00530000063672.b	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00720000108860	ENSGT00940000157037.b.b
Phasianidae	ANCESTRAL SPECIES	31	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00950000182850.a.b.b #22	ENSGT00940000157176.g.a #29	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00720000108860	ENSGT00940000157037.b.b	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00940000161685.A.a
Phasianidae_b	ANCESTRAL SPECIES	36	ENSGT00390000014618.b	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00950000182850.a.b.b #22	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387	ENSGT00940000158918	ENSGT00720000108860	ENSGT00940000157037.b.b	ENSGT00530000063711.a	ENSGT00940000155874	ENSGT01100000263540.B.d	ENSGT00940000158607	ENSGT00940000160930	ENSGT00390000005989.b	ENSGT00940000156716	ENSGT00940000161685.A.a	ENSGT00940000156208
Chicken	MODERN SPECIES	14	UNC5D (ENSGALG00010019540)	DUSP26 (ENSGALG00010017747)	RNF122 (ENSGALG00010021033)	TTI2 (ENSGALG00010017726)	MAK16 (ENSGALG00010017705)	SLC18A1 (ENSGALG00010017696)	ATP6V1B2 (ENSGALG00010017694)	LZTS1 (ENSGALG00010017691)	ENSGALG00010017686	ENSGALG00010017680	GFRA2 (ENSGALG00010017638) #17	DOK2 (ENSGALG00010019799) #18	XPO7 (ENSGALG00010020305) #19	ENSGALG00010020298	NPM2 (ENSGALG00010020292) #20	DMTN (ENSGALG00010020252) #22	ENSGALG00010020017	SORBS3 (ENSGALG00010020010) #35	ENSGALG00010019966	ENSGALG00010019935	ENSGALG00010019910	BIN3 (ENSGALG00010019859)	ENSGALG00010019328	EGR3 (ENSGALG00010019322)	PEBP4 (ENSGALG00010019726)	RHOBTB2 (ENSGALG00010019679)	TNFRSF10B (ENSGALG00010019652)	CHMP7 (ENSGALG00010019588)	ENSGALG00010020751	R3HCC1 (ENSGALG00010020055)	LOXL2 (ENSGALG00010020025)
Neognathae_b	ANCESTRAL SPECIES	28	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT01030000235403	ENSGT00940000157176.h #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558.b #35	ENSGT00940000160558.a #35
Neognathae_c	ANCESTRAL SPECIES	30	ENSGT00940000161817	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT01030000235403	ENSGT00940000157176.h #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558.b #35	ENSGT00940000160558.a #35
Golden eagle	MODERN SPECIES	4	UNC5D (ENSACCG00020005237)	DUSP26 (ENSACCG00020005301)	RNF122 (ENSACCG00020005328)	TTI2 (ENSACCG00020005359)	MAK16 (ENSACCG00020005391)	SLC18A1 (ENSACCG00020005469)	ATP6V1B2 (ENSACCG00020005521)	LZTS1 (ENSACCG00020005546)	ENSACCG00020005557	GFRA2 (ENSACCG00020005573) #17	DOK2 (ENSACCG00020005598) #18	XPO7 (ENSACCG00020005632) #19	PBDC1 (ENSACCG00020005671)	NPM2 (ENSACCG00020005694) #20	FGF17 (ENSACCG00020005742) #21	DMTN (ENSACCG00020005796) #22	ENSACCG00020005860	FHIP2B (ENSACCG00020005948) #23	NUDT18 (ENSACCG00020005998) #24	REEP4 (ENSACCG00020006043) #26	LGI3 (ENSACCG00020006071) #27	SFTPC (ENSACCG00020006086) #28	ENSACCG00020006097	BMP1 (ENSACCG00020006137) #29	PHYHIP (ENSACCG00020006184) #30	POLR3D (ENSACCG00020006199) #31	PIWIL2 (ENSACCG00020006373) #32	SLC39A14 (ENSACCG00020006593) #33	PPP3CC (ENSACCG00020006649) #34	ENSACCG00020006690 #35	ENSACCG00020006707 #35
Kakapo	MODERN SPECIES	14									LZTS1 (ENSSHBG00005012524)	GFRA2 (ENSSHBG00005012501) #17	DOK2 (ENSSHBG00005012479) #18	XPO7 (ENSSHBG00005012423) #19	PBDC1 (ENSSHBG00005012386)	NPM2 (ENSSHBG00005012369) #20	FGF17 (ENSSHBG00005012352) #21	DMTN (ENSSHBG00005011429) #22	FHIP2B (ENSSHBG00005011262) #23	NUDT18 (ENSSHBG00005011239) #24	ENSSHBG00005011199 #25	REEP4 (ENSSHBG00005011168) #26	LGI3 (ENSSHBG00005011133) #27	SFTPC (ENSSHBG00005011104) #28	BMP1 (ENSSHBG00005009557) #29	PHYHIP (ENSSHBG00005009470) #30	POLR3D (ENSSHBG00005009453) #31	PIWIL2 (ENSSHBG00005009433) #32	SLC39A14 (ENSSHBG00005009411) #33	PPP3CC (ENSSHBG00005009372) #34	ENSSHBG00005009354 #35	ENSSHBG00005009299 #35	ENSSHBG00005009266 #36
Passeriformes	ANCESTRAL SPECIES	26	ENSGT00950000182815.a.a.b	ENSGT00940000158107	ENSGT00940000159152.d	ENSGT00390000003878	ENSGT00390000012859	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868.d #18	ENSGT00940000159868.c #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161687 #25	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT00940000157176.h #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986.k.a #33	ENSGT00940000154115.c.a #34	ENSGT00940000160558.b #35	ENSGT00940000160558.a #35	ENSGT00940000160418.l #36
Great tit	MODERN SPECIES	14	ENSPMJG00000017894	UNC5D (ENSPMJG00000017814)	ENSPMJG00000017811	DUSP26 (ENSPMJG00000017808)	ENSPMJG00000017807	RNF122 (ENSPMJG00000017806)	TTI2 (ENSPMJG00000017804)	MAK16 (ENSPMJG00000017803)	SLC18A1 (ENSPMJG00000017796)	ATP6V1B2 (ENSPMJG00000017795)	LZTS1 (ENSPMJG00000017793)	GFRA2 (ENSPMJG00000017784) #17	ENSPMJG00000017782 #18	ENSPMJG00000017781	FGF17 (ENSPMJG00000017780) #21	DMTN (ENSPMJG00000017779) #22	FHIP2B (ENSPMJG00000017777) #23	NUDT18 (ENSPMJG00000017776) #24	HR (ENSPMJG00000017775) #25	ENSPMJG00000017774	REEP4 (ENSPMJG00000017773) #26	LGI3 (ENSPMJG00000017771) #27	ENSPMJG00000017770 #28	BMP1 (ENSPMJG00000017767) #29	PHYHIP (ENSPMJG00000017766) #30	POLR3D (ENSPMJG00000017765) #31	PIWIL2 (ENSPMJG00000017764) #32	SLC39A14 (ENSPMJG00000017763) #33	PPP3CC (ENSPMJG00000017755) #34	SORBS3 (ENSPMJG00000017754) #35	PDLIM2 (ENSPMJG00000017753) #36
Passeriformes_d	ANCESTRAL SPECIES																	ENSGT00950000182850.a.b.b #22
Passeriformes_g	ANCESTRAL SPECIES																	ENSGT00950000182850.a.b.b #22
Passeroidea	ANCESTRAL SPECIES																	ENSGT00950000182850.a.b.b #22
Common canary	MODERN SPECIES	108								XPO7 (ENSSCAG00000011395) #19	ENSSCAG00000011322 #18	GFRA2 (ENSSCAG00000011301) #17	LZTS1 (ENSSCAG00000011292)	ATP6V1B1 (ENSSCAG00000011154)	SLC18A1 (ENSSCAG00000011126)	MAK16 (ENSSCAG00000011120)	TTI2 (ENSSCAG00000011111)	ENSSCAG00000011105 #22
Medium ground finch	MODERN SPECIES	552																DMTN (ENSGFOG00000011691) #22
Lepidosauria	ANCESTRAL SPECIES	148										ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00940000161965 #21	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT00390000017162.c.b #28
Episquamata	ANCESTRAL SPECIES	24												ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b #22	ENSGT00390000016151	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT00390000017162.c.b #28	ENSGT00940000158546	ENSGT00950000182953.C.c	ENSGT00390000008694.b.b	ENSGT00390000004965	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279	ENSGT00930000150969.A.c.a
Toxicofera	ANCESTRAL SPECIES	49													ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b #22	ENSGT00390000016151	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161674 #26	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000160552	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00940000161614	ENSGT00940000173670	ENSGT00940000156918	ENSGT00390000010391
Elapidae	ANCESTRAL SPECIES	35	ENSGT00940000161976	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00940000161614	ENSGT00940000173670	ENSGT00940000156918	ENSGT00390000010391	ENSGT00390000007636	ENSGT00940000155847	ENSGT00940000153710.a	ENSGT00940000154148.a.b	ENSGT00950000182943.kb.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b #22	ENSGT00390000016151	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161674 #26	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000176261	ENSGT00730000111371	ENSGT00940000160058	ENSGT00390000006707	ENSGT00510000046985.m	ENSGT00390000011206.a	ENSGT00940000154962.A
Indian cobra	MODERN SPECIES	7	ENSNNAG00000006515	PSD4 (ENSNNAG00000006478)	VAMP8 (ENSNNAG00000006460)	GGCX (ENSNNAG00000006440)	DKK4 (ENSNNAG00000006409)	POLB (ENSNNAG00000006324)	UFM1 (ENSNNAG00000006300)	KANSL3 (ENSNNAG00000006221)	ENSNNAG00000006182	STAMBP (ENSNNAG00000006152)	ACTG2 (ENSNNAG00000006120)	ENSNNAG00000006103	GFRA2 (ENSNNAG00000006075) #17	XPO7 (ENSNNAG00000006001) #19	ENSNNAG00000005961	DMTN (ENSNNAG00000005920) #22	NDUFA10 (ENSNNAG00000005886)	FHIP2B (ENSNNAG00000005848) #23	NUDT18 (ENSNNAG00000005830) #24	REEP4 (ENSNNAG00000005653) #26	SFTPB (ENSNNAG00000005606)	C2orf68 (ENSNNAG00000005564)	USP39 (ENSNNAG00000005511)	TMEM150A (ENSNNAG00000005479)	ENSNNAG00000005460	VAMP5 (ENSNNAG00000005451)	TGFA (ENSNNAG00000005430)	FAM136A (ENSNNAG00000005412)	SNRPG (ENSNNAG00000005396)	PCYOX1 (ENSNNAG00000005378)	TIA1 (ENSNNAG00000005335)
Elapidae_a	ANCESTRAL SPECIES	58	ENSGT00940000161976	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00940000161614	ENSGT00940000173670	ENSGT00940000156918	ENSGT00390000010391	ENSGT00390000007636	ENSGT00940000155847	ENSGT00940000153710.a	ENSGT00940000154148.a.b	ENSGT00950000182943.kb.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b #22	ENSGT00390000016151	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161674 #26	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000176261	ENSGT00730000111371	ENSGT00940000160058	ENSGT00390000006707	ENSGT00510000046985.m	ENSGT00390000011206.a	ENSGT00940000154962.A
Blue-lipped sea krait	MODERN SPECIES	3262	TMED4 (ENSLLTG00000005312)	ENSLLTG00000005322	PSD4 (ENSLLTG00000005327)	VAMP8 (ENSLLTG00000005342)	GGCX (ENSLLTG00000005351)	DKK4 (ENSLLTG00000005386)	POLB (ENSLLTG00000005401)	UFM1 (ENSLLTG00000005451)	KANSL3 (ENSLLTG00000005487)	DUSP11 (ENSLLTG00000005571)	STAMBP (ENSLLTG00000005583)	ENSLLTG00000005598	ENSLLTG00000005606	GFRA2 (ENSLLTG00000005617) #17	XPO7 (ENSLLTG00000005630) #19	DMTN (ENSLLTG00000005664) #22	NDUFA10 (ENSLLTG00000005690)	FHIP2B (ENSLLTG00000005702) #23	REEP4 (ENSLLTG00000005728) #26	ENSLLTG00000005760	USP39 (ENSLLTG00000005789)	C2orf68 (ENSLLTG00000005814)	TMEM150A (ENSLLTG00000005820)	ENSLLTG00000005826	VAMP5 (ENSLLTG00000005833)
Acanthophiinae	ANCESTRAL SPECIES	40	ENSGT00940000161976	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00940000161614	ENSGT00940000173670	ENSGT00940000156918	ENSGT00390000010391	ENSGT00390000007636	ENSGT00940000155847	ENSGT00940000153710.a	ENSGT00940000154148.a.b	ENSGT00950000182943.kb.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b #22	ENSGT00390000016151	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931.f #24	ENSGT00940000161674 #26	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000176261	ENSGT00940000165973	ENSGT00730000111371	ENSGT00940000160058	ENSGT00390000006707	ENSGT00510000046985.m	ENSGT00390000011206.a
Eastern brown snake	MODERN SPECIES	76	ENSPTXG00000013462	VAMP8 (ENSPTXG00000013464)	GGCX (ENSPTXG00000013466)	DKK4 (ENSPTXG00000013467)	ENSPTXG00000013468	POLB (ENSPTXG00000013469)	UFM1 (ENSPTXG00000013473)	ENSPTXG00000013474	ENSPTXG00000013476	STAMBP (ENSPTXG00000013478)	ENSPTXG00000013480	ENSPTXG00000013481	GFRA2 (ENSPTXG00000013483) #17	XPO7 (ENSPTXG00000013490) #19	PBDC1 (ENSPTXG00000015088)	DMTN (ENSPTXG00000015092) #22	NDUFA10 (ENSPTXG00000015687)	FHIP2B (ENSPTXG00000015706) #23	ENSPTXG00000015707 #24	REEP4 (ENSPTXG00000015708) #26	ENSPTXG00000015709	USP39 (ENSPTXG00000015711)	C2orf68 (ENSPTXG00000016597)	TMEM150A (ENSPTXG00000016598)	ENSPTXG00000016600	VAMP5 (ENSPTXG00000016601)	TGFA (ENSPTXG00000016603)	FAM136A (ENSPTXG00000016604)	SNRPG (ENSPTXG00000016606)	PCYOX1 (ENSPTXG00000016608)	TIA1 (ENSPTXG00000016609)
Lizard	MODERN SPECIES	1454																ENSACAG00000000794 #22	ENSACAG00000000705	ENSACAG00000037682	ENSACAG00000038581	ENSACAG00000000599 #24	ITPRIPL1 (ENSACAG00000025480)	ENSACAG00000038214	ENSACAG00000000434	TMEM127 (ENSACAG00000000419)
Laterata	ANCESTRAL SPECIES	44												ENSGT00940000156168.B #17	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b #22	ENSGT00390000016151	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161674 #26	ENSGT00940000160296 #27	ENSGT00390000017162.c.a #28	ENSGT00390000017162.c.b #28	ENSGT00940000158546	ENSGT00950000182953.C.c	ENSGT00390000008694.b.b	ENSGT00390000004965	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279	ENSGT00930000150969.A.c.a
Common wall lizard	MODERN SPECIES	16	ENSPMRG00000012386	ENSPMRG00000012384	NPC1L1 (ENSPMRG00000012375)	MRPS24 (ENSPMRG00000012371)	ENSPMRG00000012368	SLC20A1 (ENSPMRG00000012354)	NT5DC4 (ENSPMRG00000012344)	ENSPMRG00000012338	ENSPMRG00000012332	ENSPMRG00000012323	GFRA2 (ENSPMRG00000012316) #17	ENSPMRG00000012311	ENSPMRG00000012302 #18	XPO7 (ENSPMRG00000012274) #19	PBDC1 (ENSPMRG00000012269)	DMTN (ENSPMRG00000012253) #22	NDUFA10 (ENSPMRG00000012241)	FHIP2B (ENSPMRG00000012234) #23	NUDT18 (ENSPMRG00000012231) #24	ENSPMRG00000012230	REEP4 (ENSPMRG00000012226) #26	LGI3 (ENSPMRG00000012224) #27	ENSPMRG00000012221 #28	ENSPMRG00000012220 #28	ENSPMRG00000012217	RASSF2 (ENSPMRG00000012206)	SLC23A2 (ENSPMRG00000012189)	TMEM230 (ENSPMRG00000012185)	ENSPMRG00000012184	ENSPMRG00000012181	CDS2 (ENSPMRG00000012169)
Argentine black and white tegu	MODERN SPECIES	94	SBNO2 (ENSSMRG00000016348)	ENSSMRG00000016347	POLRMT (ENSSMRG00000016346)	HCN2 (ENSSMRG00000016345)	NDUFS7 (ENSSMRG00000016344)	GAMT (ENSSMRG00000016343)	DAZAP1 (ENSSMRG00000016342)	RPS15 (ENSSMRG00000016341)	APC2 (ENSSMRG00000016340)	TJP3 (ENSSMRG00000016339)	APBA3 (ENSSMRG00000016338)	GFRA2 (ENSSMRG00000016335) #17	ENSSMRG00000016334 #18	XPO7 (ENSSMRG00000016333) #19	ENSSMRG00000016332	DMTN (ENSSMRG00000016329) #22	NDUFA10 (ENSSMRG00000016327)	FHIP2B (ENSSMRG00000016325) #23	NUDT18 (ENSSMRG00000016323) #24	REEP4 (ENSSMRG00000016321) #26	ENSSMRG00000016317	USP39 (ENSSMRG00000016314)	C2orf68 (ENSSMRG00000016312)	TMEM150A (ENSSMRG00000016309)	RNF181 (ENSSMRG00000016308)	VAMP5 (ENSSMRG00000016307)	VAMP8 (ENSSMRG00000016306)	GGCX (ENSSMRG00000016305)	DKK4 (ENSSMRG00000016304)	POLB (ENSSMRG00000016114)	UFM1 (ENSSMRG00000016113)
tuatara	MODERN SPECIES	513										GFRA2 (ENSSPUG00000011673) #17	DOK2 (ENSSPUG00000011603) #18	XPO7 (ENSSPUG00000011549) #19	PBDC1 (ENSSPUG00000011523)	NPM2 (ENSSPUG00000011509) #20	FGF17 (ENSSPUG00000011499) #21	DMTN (ENSSPUG00000011478) #22	FHIP2B (ENSSPUG00000011452) #23	NUDT18 (ENSSPUG00000011438) #24	REEP4 (ENSSPUG00000011425) #26	LGI3 (ENSSPUG00000011408) #27
Anura	ANCESTRAL SPECIES	30	ENSGT00390000013415.a.b	ENSGT01030000234527.A.a.b.a.a.n	ENSGT01060000248581.E.d.b.a.b.a.a	ENSGT00940000161454.i.b.b	ENSGT00950000183082.b.a	ENSGT00940000158663	ENSGT00390000012859	ENSGT00390000003878	ENSGT00940000159352	ENSGT00940000155068.b	ENSGT00940000158603.f	ENSGT00940000159868 #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00940000161418 #20	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000161674 #26	ENSGT00390000017162 #28	ENSGT00940000157176 #29	ENSGT00390000014563.b #30	ENSGT00390000013948.a #31	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.d ##34	ENSGT00940000160558 #35	ENSGT00940000160418 #36	ENSGT00950000182882.B	ENSGT00940000160355	ENSGT00940000162387
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000017794	ENSLLEG00000017890	ENSLLEG00000018021	MAK16 (ENSLLEG00000018049)	ENSLLEG00000018128	TTI2 (ENSLLEG00000018148)	SLC18A1 (ENSLLEG00000018264)	ATP6V1B2 (ENSLLEG00000018413)	ENSLLEG00000018659	GFRA2 (ENSLLEG00000018714) ##17	ENSLLEG00000018974	DOK2 (ENSLLEG00000019038) #18	XPO7 (ENSLLEG00000019200) #19	PBDC1 (ENSLLEG00000020403)	NPM2 (ENSLLEG00000020477) #20	DMTN (ENSLLEG00000020614) #22	FHIP2B (ENSLLEG00000021355) #23	NUDT18 (ENSLLEG00000021604) #24	REEP4 (ENSLLEG00000021676) #26	SFTPC (ENSLLEG00000021760) #28	ENSLLEG00000021859	BMP1 (ENSLLEG00000021905) #29	PHYHIP (ENSLLEG00000022447) #30	POLR3D (ENSLLEG00000022538) #31	PIWIL2 (ENSLLEG00000022744) #32	ENSLLEG00000024172	ENSLLEG00000024202	SLC39A14 (ENSLLEG00000024250) #33	ENSLLEG00000024713 ##34	ENSLLEG00000026509 #36	ENSLLEG00000026536
Frog	MODERN SPECIES	3	mak16 (ENSXETG00000016495)	tti2 (ENSXETG00000039663)	slc18a1 (ENSXETG00000016493)	ENSXETG00000047858	ENSXETG00000037868	ENSXETG00000034182	ENSXETG00000016483	atp6v1b2 (ENSXETG00000016476)	ENSXETG00000045740	lzts1 (ENSXETG00000016474)	gfra2 (ENSXETG00000010546) ##17	dok2 (ENSXETG00000010545) #18	xpo7 (ENSXETG00000010544) #19	pbdc1 (ENSXETG00000010543)	npm2 (ENSXETG00000010542) #20	dmtn (ENSXETG00000010540) #22	fhip2b (ENSXETG00000010539) #23	nudt18 (ENSXETG00000037630) #24	reep4 (ENSXETG00000010537) #26	sftpc (ENSXETG00000031314) #28	bmp1 (ENSXETG00000010536) #29	phyhip (ENSXETG00000010535) #30	polr3d (ENSXETG00000010534) #31	piwil2 (ENSXETG00000010533) #32	slc39a14 (ENSXETG00000010532) #33	ppp3cb (ENSXETG00000010528) ##34	sorbs3 (ENSXETG00000034882) #35	pdlim2 (ENSXETG00000037689) #36	ENSXETG00000048910	bin3 (ENSXETG00000044280)	egr3 (ENSXETG00000031881)
Coelacanth	MODERN SPECIES	353	PPP3CC (ENSLACG00000004479) #34	SORBS3 (ENSLACG00000008121) #35	ENSLACG00000008154	ENSLACG00000010398 #36	CCAR2 (ENSLACG00000011333)	BIN3 (ENSLACG00000011826)	EGR3 (ENSLACG00000013087)	PEBP4 (ENSLACG00000013523)	RHOBTB2 (ENSLACG00000015074)	ENSLACG00000022264	ENSLACG00000015570	ENSLACG00000015788	XPO7 (ENSLACG00000015823) #19	PBDC1 (ENSLACG00000016137)	NPM2 (ENSLACG00000016196) #20	DMTN (ENSLACG00000016733) #22	ENSLACG00000016972	FHIP2B (ENSLACG00000017024) #23	NUDT18 (ENSLACG00000017102) #24	PCNX2 (ENSLACG00000017121)	NTPCR (ENSLACG00000017277)	MAP10 (ENSLACG00000017321)
Actinopterygii	ANCESTRAL SPECIES	183	ENSGT00390000011010.a.a	ENSGT00940000163584.b.b	ENSGT00940000156732	ENSGT00940000160915	ENSGT00940000157038	ENSGT00530000064712	ENSGT00940000164699	ENSGT00940000155847	ENSGT00940000153710.a	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868.b #18	ENSGT00530000063555.B	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239	ENSGT00940000164380.b
Neopterygii	ANCESTRAL SPECIES	104	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b	ENSGT00940000160915	ENSGT00940000157038	ENSGT00940000156732.a.a	ENSGT00530000064712	ENSGT00940000164699	ENSGT00940000155847	ENSGT00940000153710.a	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868.b #18	ENSGT00530000063555.B	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239	ENSGT00940000164380.b	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.d ##34	ENSGT00940000156716	ENSGT00390000003458	ENSGT00940000156888	ENSGT00940000159875	ENSGT00390000000134.b	ENSGT00530000063711.a
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000182850.a.b.b.a #22
Clupeocephala	ANCESTRAL SPECIES	320															ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00940000165894.a	ENSGT00940000177802	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00490000043388.a	ENSGT00940000158107.a.b	ENSGT00940000158936	ENSGT00730000111133	ENSGT00940000164321.c	ENSGT00940000155477	ENSGT00390000009488	ENSGT00940000158323.h	ENSGT00390000006780
Otomorpha	ANCESTRAL SPECIES	325							ENSGT00390000006780	ENSGT00940000158323.h	ENSGT00390000009488	ENSGT00940000155477	ENSGT00940000164321.c	ENSGT00730000111133	ENSGT00940000158936	ENSGT00940000158107.a.b	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.a.b	ENSGT00940000165894.a	ENSGT00940000177802	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00490000043388.a
Clupeiformes	ANCESTRAL SPECIES	303	ENSGT00950000183125.b.a.a.a.a.b	ENSGT01030000234539.b.b.a.i	ENSGT00940000165894.a	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00390000006780	ENSGT00940000158323.h	ENSGT00390000009488	ENSGT00940000155477	ENSGT00940000164321.c	ENSGT00730000111133.ab	ENSGT00940000158936	ENSGT00940000158107.a.b	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239
Atlantic herring	MODERN SPECIES	23	ENSCHAG00000015131	nelfb (ENSCHAG00000014916)	entpd2a.1 (ENSCHAG00000014903)	pold2 (ENSCHAG00000014807)	AEBP1 (ENSCHAG00000014474)	ELMOD3 (ENSCHAG00000014428)	star (ENSCHAG00000014237)	ENSCHAG00000013106	lsm1 (ENSCHAG00000013056)	bag4 (ENSCHAG00000013046)	ENSCHAG00000013032	DUSP26 (ENSCHAG00000013022)	rsph14 (ENSCHAG00000013018)	ENSCHAG00000012975	ENSCHAG00000012949	DMTN (ENSCHAG00000012819) #22	ENSCHAG00000012794	fhip2b (ENSCHAG00000012687) #23	nudt18 (ENSCHAG00000012679) #24	adam9 (ENSCHAG00000011886)	adam9 (ENSCHAG00000011732)	ENSCHAG00000011719	anapc5 (ENSCHAG00000010301)	rnf34a (ENSCHAG00000010217)	kdm2ba (ENSCHAG00000010206)	ORAI1 (ENSCHAG00000010157)	rflna (ENSCHAG00000010145)	ncor2 (ENSCHAG00000008412)	EP400 (ENSCHAG00000006077)	ulk1a (ENSCHAG00000005888)	tesca (ENSCHAG00000005856)
Denticle herring	MODERN SPECIES	2	zcchc8 (ENSDCDG00000002992)	rsrc2 (ENSDCDG00000002949)	ercc8 (ENSDCDG00000029391)	elovl7a (ENSDCDG00000029385)	PDE4D (ENSDCDG00000029029)	rab3c (ENSDCDG00000028997)	si:dkey-190g11.3 (ENSDCDG00000028995)	plk2b (ENSDCDG00000028597)	ENSDCDG00000028569	pold2 (ENSDCDG00000028553)	star (ENSDCDG00000028548)	lsm1 (ENSDCDG00000028545)	bag4 (ENSDCDG00000028544)	DUSP26 (ENSDCDG00000028543)	rsph14 (ENSDCDG00000028542)	DMTN (ENSDCDG00000028540) #22	mymk (ENSDCDG00000028535)	ENSDCDG00000028528	fhip2b (ENSDCDG00000028505) #23	ncor2 (ENSDCDG00000027112)	mier3b (ENSDCDG00000027021)	kif2a (ENSDCDG00000026300)	unc45b (ENSDCDG00000023465)	pip5k1bb (ENSDCDG00000023395)	fxn (ENSDCDG00000023387)	tjp2b (ENSDCDG00000023358)	ENTREP1 (ENSDCDG00000023329)	APBA1 (ENSDCDG00000022754)	ptar1 (ENSDCDG00000022744)	mamdc2a (ENSDCDG00000022701)	MYORG (ENSDCDG00000022682)
Euteleosteomorpha	ANCESTRAL SPECIES	598															ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22
Acanthomorphata	ANCESTRAL SPECIES	207				ENSGT00390000003878	ENSGT00940000159352	ENSGT01030000234539.b.b.a.j	ENSGT00950000183125.b.a.a.a.b	ENSGT00940000156239	ENSGT00940000156837	ENSGT00610000087474	ENSGT01080000257533	ENSGT00980000198657	ENSGT00940000177260	ENSGT00390000002931 #24	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000004950	ENSGT00550000074618.b	ENSGT00530000065159	ENSGT00940000155553.e.b
Euacanthomorphacea	ANCESTRAL SPECIES	58	ENSGT00940000156744.o	ENSGT00940000161616.d	ENSGT00940000155670	ENSGT00940000155434	ENSGT00390000003878	ENSGT00940000159352	ENSGT01030000234539.b.b.a.j	ENSGT00950000183125.b.a.a.a.b	ENSGT00940000156239	ENSGT00940000156837	ENSGT00610000087474	ENSGT00980000198657	ENSGT00940000177260	ENSGT00390000002931 #24	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000004950	ENSGT00550000074618.b	ENSGT00530000065159	ENSGT00940000155553.e.b
Pinecone sodierfish	MODERN SPECIES	23	ENSMMDG00005008431	ENSMMDG00005008423	ENSMMDG00005007341	ENSMMDG00005007325	ENSMMDG00005007324	ENSMMDG00005007316	ENSMMDG00005007314	ENSMMDG00005007308	ENSMMDG00005007302	ENSMMDG00005007297	ENSMMDG00005007294	ENSMMDG00005007291	ENSMMDG00005007289	nudt18 (ENSMMDG00005007287) #24	ENSMMDG00005007285	DMTN (ENSMMDG00005007009) #22	ENSMMDG00005007003	mak16 (ENSMMDG00005006998)	ENSMMDG00005006995	ENSMMDG00005006829	LRRC2 (ENSMMDG00005006818)	srp19 (ENSMMDG00005006811)	ENSMMDG00005006807	zgc:101664 (ENSMMDG00005006802)	pik3r1 (ENSMMDG00005003259)	ENSMMDG00005003157	ENSMMDG00005003154	ENSMMDG00005003148	ENSMMDG00005003143	ENSMMDG00005003135	ska3 (ENSMMDG00005003126)
Percomorphaceae	ANCESTRAL SPECIES	112						ENSGT00950000182960.a.a.a.b	ENSGT00950000182960.a.a.a.a	ENSGT00950000182960.a.b	ENSGT01100000263483.D.d	ENSGT00940000164100.A.c.a	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960
Tiger tail seahorse	MODERN SPECIES	127	ENSHCOG00000014792	ENSHCOG00000014786	ENSHCOG00000014781	ENSHCOG00000014777	ENSHCOG00000014713	ENSHCOG00000013501	ENSHCOG00000013489	ENSHCOG00000013472	ENSHCOG00000013455	ENSHCOG00000000385	pik3r1 (ENSHCOG00000013400)	ENSHCOG00000013354	ENSHCOG00000013345	ENSHCOG00000013327	srp19 (ENSHCOG00000013231)	ENSHCOG00000013203 #22	ENSHCOG00000013180	mak16 (ENSHCOG00000013162)	ENSHCOG00000013147	ENSHCOG00000013125	ENSHCOG00000013055	ENSHCOG00000012991	ENSHCOG00000012972	SNX2 (ENSHCOG00000012953)	PPIC (ENSHCOG00000012937)	PRDM6 (ENSHCOG00000012899)	CEP120 (ENSHCOG00000012861)	ENSHCOG00000012798	ENSHCOG00000012779
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00940000166999.A	ENSGT01100000263483.D.d.a.a.a.a	ENSGT01100000263483.D.d.a.b.b	ENSGT00950000182960.a.b	ENSGT00940000164100.A.c.b.b	ENSGT01100000263538.A.b.h	ENSGT01100000263483.D.d.a.b.a.a.b	ENSGT00940000164100.A.c.a.d.a.a.a.b.b.a	ENSGT00940000175544	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT01080000257533	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00940000155852	ENSGT00940000159786	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000177613	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT01080000257533	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT01100000263483.D.c.b.b.a	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000159786	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00770000121806.b	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000179723	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b
Carangaria	ANCESTRAL SPECIES	27											ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000179723	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b
Carangaria_A	ANCESTRAL SPECIES	88											ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000179723	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239.n	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b
Seriola	ANCESTRAL SPECIES	137											ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000179723	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239.n	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT01030000236622	ENSGT00940000159352
Greater amberjack	MODERN SPECIES	189										pik3r1 (ENSSDUG00000012825)	ENSSDUG00000012891	ENSSDUG00000012899	srp19 (ENSSDUG00000012930)	ENSSDUG00000012954	ENSSDUG00000013006	DMTN (ENSSDUG00000013017) #22	ENSSDUG00000013050	mak16 (ENSSDUG00000013093)	ENSSDUG00000013126	ENSSDUG00000013151	ENSSDUG00000013174	ENSSDUG00000013195	ENSSDUG00000013208	ENSSDUG00000013220	ENSSDUG00000013230	nudt18 (ENSSDUG00000013243) #24	ENSSDUG00000013256	ENSSDUG00000013275	si:ch211-191j22.3 (ENSSDUG00000013285)	ercc6l (ENSSDUG00000013307)	adam9 (ENSSDUG00000013344)
Yellowtail amberjack	MODERN SPECIES	3171															ENSSLDG00000002805	ENSSLDG00000002935 #22
Barramundi perch	MODERN SPECIES	37	ENSLCAG00010013819	ENSLCAG00010014092	ENSLCAG00010014094	ENSLCAG00010014097	ENSLCAG00010014101	ENSLCAG00010014112	ENSLCAG00010014119	ENSLCAG00010014120	ENSLCAG00010014123	ENSLCAG00010014128	ENSLCAG00010014140	zgc:101664 (ENSLCAG00010014156)	pik3r1 (ENSLCAG00010014163)	srp19 (ENSLCAG00010014197)	ENSLCAG00010014223	DMTN (ENSLCAG00010014231) #22	ENSLCAG00010014247	ENSLCAG00010014257	mak16 (ENSLCAG00010014275)	ENSLCAG00010014283	ENSLCAG00010014290	ENSLCAG00010014305	nudt18 (ENSLCAG00010014309) #24	ENSLCAG00010014310	ENSLCAG00010014312	si:ch211-191j22.3 (ENSLCAG00010014313)	ercc6l (ENSLCAG00010014315)	adam9 (ENSLCAG00010014362)	OGDH (ENSLCAG00010014796)	ENSLCAG00010015158	ENSLCAG00010015172
Pleuronectoidei	ANCESTRAL SPECIES	57	ENSGT00390000009378	ENSGT00940000155852	ENSGT01100000263483.D.c.b.b.a	ENSGT00940000159786	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00550000074618.b	ENSGT00530000065159	ENSGT00940000155553.e.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352
Turbot	MODERN SPECIES	21	ENSSMAG00000017039	ENSSMAG00000017128	ENSSMAG00000016994	ENSSMAG00000032892	ENSSMAG00000017003	ENSSMAG00000027844	ENSSMAG00000032244	ENSSMAG00000023322	ENSSMAG00000016922	ENSSMAG00000016886	ENSSMAG00000016871	ENSSMAG00000036934	ENSSMAG00000016827	ENSSMAG00000016803	ENSSMAG00000016784	ENSSMAG00000018485 #22	ENSSMAG00000018475	ENSSMAG00000018454	ENSSMAG00000018432	ENSSMAG00000018414	ENSSMAG00000018386	ENSSMAG00000032311	ENSSMAG00000018346	ENSSMAG00000018311 #24	ENSSMAG00000018307	ENSSMAG00000032668	ENSSMAG00000034622	ENSSMAG00000026005	ENSSMAG00000018241	ENSSMAG00000018156	ENSSMAG00000018121
Tongue sole	DUPLICATION
Tongue sole	MODERN SPECIES	75																ENSCSEG00000018260 #22
Tongue sole	MODERN SPECIES	398	ENSCSEG00000009772	ENSCSEG00000009777	ACTB (ENSCSEG00000009782)	ENSCSEG00000009792	ENSCSEG00000009802	ENSCSEG00000009812	ENSCSEG00000009823	ENSCSEG00000009832	ENSCSEG00000009834	ENSCSEG00000009838	ENSCSEG00000009850	pik3r1 (ENSCSEG00000009859)	srp19 (ENSCSEG00000010039)	ENSCSEG00000010048	mak16 (ENSCSEG00000010069)	ENSCSEG00000010102 #22	ENSCSEG00000010141	ENSCSEG00000010156	ENSCSEG00000010166	ENSCSEG00000010182	ENSCSEG00000010214	mov10b.1 (ENSCSEG00000010226)	ENSCSEG00000010243	nudt18 (ENSCSEG00000010245) #24	ENSCSEG00000010250	ENSCSEG00000010256	si:ch211-191j22.3 (ENSCSEG00000010262)	ercc6l (ENSCSEG00000010268)	adam9 (ENSCSEG00000010289)	ENSCSEG00000010316	ENSCSEG00000010323
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00770000121806.b	ENSGT00940000166999.A	ENSGT00940000164100.A.c.a.d.a.a.b	ENSGT01100000263483.D.d.a.b.a.a.a.a.b	ENSGT00950000182960.a.b	ENSGT00940000164100.A.c.a.d.a.a.a.b.b.a	ENSGT00940000164100.A.c.b.b	ENSGT01100000263538.A.b.h.c.a	ENSGT00940000154311.b	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000002931 #24	ENSGT00940000177260	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000177802	ENSGT00940000159352
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00770000121806.b	ENSGT00940000166999.A	ENSGT00940000164100.A.c.a.d.a.a.b	ENSGT01100000263483.D.d.a.b.a.a.a.a.b	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000177802	ENSGT00940000159352	ENSGT00390000003878
Climbing perch	MODERN SPECIES	22	ENSATEG00000012086	ENSATEG00000026403	ENSATEG00000012163	ENSATEG00000012135	ENSATEG00000012144	ENSATEG00000011994	ENSATEG00000012201	ENSATEG00000027381	ENSATEG00000012250	ENSATEG00000012313	ENSATEG00000012423	ENSATEG00000012439	ENSATEG00000012442	ENSATEG00000028289	ENSATEG00000012492	ENSATEG00000012562 #22	ENSATEG00000012588	ENSATEG00000012604	ENSATEG00000012637	ENSATEG00000029749	ENSATEG00000012689	ENSATEG00000012742	ENSATEG00000012747	ENSATEG00000025247	ENSATEG00000029864	ENSATEG00000012825	ENSATEG00000012832	ENSATEG00000012864	ENSATEG00000012879	ENSATEG00000012898	ENSATEG00000012912 #24
Siamese fighting fish	MODERN SPECIES	20	ENSBSLG00000017881	sncaip (ENSBSLG00000017899)	PPIC (ENSBSLG00000017923)	ENSBSLG00000017931	sncaip (ENSBSLG00000017983)	ENSBSLG00000017999	ENSBSLG00000018191	ENSBSLG00000018296	ENSBSLG00000018306	ENSBSLG00000018317	ENSBSLG00000018426	ENSBSLG00000019402	ENSBSLG00000019423	srp19 (ENSBSLG00000019470)	ENSBSLG00000019493	DMTN (ENSBSLG00000019506) #22	ENSBSLG00000019770	ENSBSLG00000019809	mak16 (ENSBSLG00000019874)	ENSBSLG00000019891	ENSBSLG00000019942	ENSBSLG00000020177	ENSBSLG00000020184	nudt18 (ENSBSLG00000020979) #24	ENSBSLG00000001727	ENSBSLG00000001730	ercc6l (ENSBSLG00000001742)	adam9 (ENSBSLG00000001800)	OGDH (ENSBSLG00000001950)	ZMIZ2 (ENSBSLG00000002195)	ENSBSLG00000002320
Zig-zag eel	MODERN SPECIES	23	ENSMAMG00000026648	ENSMAMG00000018155	ENSMAMG00000018170	ENSMAMG00000026426	ENSMAMG00000028003	ENSMAMG00000024318	ENSMAMG00000018181	ENSMAMG00000025512	ENSMAMG00000018261	ENSMAMG00000025688	ENSMAMG00000018281	ENSMAMG00000018314	ENSMAMG00000018322	ENSMAMG00000018346	ENSMAMG00000018363	ENSMAMG00000018413 #22	ENSMAMG00000025005	ENSMAMG00000018478	ENSMAMG00000026732	ENSMAMG00000018516	ENSMAMG00000018542	ENSMAMG00000018565 #24	ENSMAMG00000028649	ENSMAMG00000018574	ENSMAMG00000018595	ENSMAMG00000018609	adam9 (ENSMAMG00000018620)	OGDH (ENSMAMG00000018638)	ENSMAMG00000018709	ENSMAMG00000018773	ENSMAMG00000018787
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00940000159786	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000177613	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT01080000257533	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00940000159786	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000177613	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT01080000257533	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b
Ballan wrasse	MODERN SPECIES	3268																DMTN (ENSLBEG00000017665) #22
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT01080000257365.b.a.a.b.b.e	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00510000047925.e	ENSGT00940000156675.d	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000164645.b	ENSGT00390000017833	ENSGT00940000157825.a	ENSGT00510000047107.A	ENSGT00510000047961.c	ENSGT00940000156754.a.b.b	ENSGT00940000155560.k	ENSGT00940000155790	ENSGT00950000182850.a.b.b.a #22	ENSGT00950000183067.a.b.b	ENSGT00940000161629.b	ENSGT00940000159040	ENSGT00940000158754	ENSGT00720000108851	ENSGT00940000161953	ENSGT00390000015483	ENSGT00940000158766	ENSGT00390000006729	ENSGT00940000165556.a.b	ENSGT00940000153232.a.a	ENSGT00940000158418	ENSGT00940000157814	ENSGT00940000165556.a.a	ENSGT00950000182850.a.a.b ##22
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00940000160552	ENSGT01030000234578.A.b.a.a.b	ENSGT00940000157438.c	ENSGT01000000215531	ENSGT00510000047107.B.d	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000182960.a.b	ENSGT00940000164100.A.c.b.b	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT01080000257533	ENSGT01080000257562	ENSGT00940000177260	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT01080000257365.b.a.a.b.b.e	ENSGT00940000166361	ENSGT00390000017837.a.w	ENSGT00510000047925.e	ENSGT00940000156675.d	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00940000164645.b	ENSGT00390000017833	ENSGT00940000157825.a	ENSGT00510000047107.A	ENSGT00510000047961.c	ENSGT00940000156754.a.b.b	ENSGT00940000155560.k	ENSGT00940000155790	ENSGT00950000182850.a.b.b.a #22	ENSGT00950000183067.a.b.b	ENSGT00940000161629.b	ENSGT00940000159040	ENSGT00940000158754	ENSGT00720000108851	ENSGT00940000161953	ENSGT00390000015483	ENSGT00940000158766	ENSGT00390000006729	ENSGT00940000165556.a.b	ENSGT00940000153232.a.a	ENSGT00940000158418	ENSGT00940000157814	ENSGT00940000165556.a.a	ENSGT00950000182850.a.a.b ##22
European seabass	MODERN SPECIES	81																ENSDLAG00005005121 #22	ENSDLAG00005005131	ENSDLAG00005028908	ENSDLAG00005006015	ENSDLAG00005028359	ENSDLAG00005003315	ENSDLAG00005014457	ENSDLAG00005032528	ENSDLAG00005029901 #24	ENSDLAG00005027476	ENSDLAG00005003010
Large yellow croaker	MODERN SPECIES	479	ENSLCRG00005005879	MYO18A (ENSLCRG00005005918)	pipox (ENSLCRG00005010976)	SEZ6 (ENSLCRG00005010990)	PHF12 (ENSLCRG00005011037)	dhrs13a.3 (ENSLCRG00005011135)	ENSLCRG00005011136	lhx1a (ENSLCRG00005011137)	ENSLCRG00005011138	ENSLCRG00005011139	ENSLCRG00005011140	pik3r1 (ENSLCRG00005011151)	ENSLCRG00005011536	ENSLCRG00005011538	ENSLCRG00005011542	ENSLCRG00005011545 #22	ENSLCRG00005011553	ENSLCRG00005011559	mak16 (ENSLCRG00005011572)	ENSLCRG00005011597	ENSLCRG00005011612	ENSLCRG00005012071	ENSLCRG00005012072	nudt18 (ENSLCRG00005012073) #24	ENSLCRG00005012074	ENSLCRG00005012076	si:ch211-191j22.3 (ENSLCRG00005012077)	ercc6l (ENSLCRG00005012078)	rxfp1 (ENSLCRG00005012079)	etfdh (ENSLCRG00005012084)	ppid (ENSLCRG00005012129)
Perciformes	ANCESTRAL SPECIES	6	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000177613	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT01100000263483.D.d.a.a.a.a	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT01080000257533	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352
Perciformes_a	ANCESTRAL SPECIES																	ENSGT00950000182850.a.b.b.a #22
Channel bull blenny	MODERN SPECIES	23	ENSCGOG00000018868	zgc:158343 (ENSCGOG00000018871)	ENSCGOG00000018874	ENSCGOG00000018877	ACTB (ENSCGOG00000018964)	ENSCGOG00000022633	ENSCGOG00000022635	ENSCGOG00000022638	ENSCGOG00000022643	pik3r1 (ENSCGOG00000022701)	ENSCGOG00000023401	ENSCGOG00000023406	srp19 (ENSCGOG00000023477)	ENSCGOG00000023479	sms (ENSCGOG00000000457)	DMTN (ENSCGOG00000000485) #22	ENSCGOG00000000497	ENSCGOG00000000510	mak16 (ENSCGOG00000000547)	ENSCGOG00000000624	ENSCGOG00000000629	ENSCGOG00000000670	ENSCGOG00000000808	ENSCGOG00000000816	nudt18 (ENSCGOG00000000817) #24	ENSCGOG00000000822	ENSCGOG00000000824	si:ch211-191j22.3 (ENSCGOG00000000825)	ercc6l (ENSCGOG00000000827)	adam9 (ENSCGOG00000000859)	OGDH (ENSCGOG00000001069)
Cottioidei	ANCESTRAL SPECIES	27	ENSGT00940000159734	ENSGT00940000160428.b.b	ENSGT00550000075041	ENSGT00940000164784	ENSGT00390000014148.f	ENSGT00940000156231.o.b	ENSGT00940000159868.b #18	ENSGT00940000158016.c.b	ENSGT00940000165894.b	ENSGT01030000234539.b.b.a.j	ENSGT00950000183125.b.a.a.a.b	ENSGT00940000156239	ENSGT00940000156837	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00610000087474	ENSGT00550000074618.b	ENSGT00530000065159	ENSGT00940000155553.e.b	ENSGT00940000165390.b.d	ENSGT00950000182960.a.b	ENSGT00940000164100.A.c.b.b	ENSGT00940000166999.A	ENSGT00940000169174
Stickleback	MODERN SPECIES	155							ENSGACG00000001124	ENSGACG00000001108	ENSGACG00000001105	OGDH (ENSGACG00000001103)	adam9 (ENSGACG00000001098)	ENSGACG00000001097	ercc6l (ENSGACG00000001096)	srp19 (ENSGACG00000001093)	ENSGACG00000001092	DMTN (ENSGACG00000001091) #22	ENSGACG00000001087	mak16 (ENSGACG00000001081)	ENSGACG00000001078	LRRC2 (ENSGACG00000001076)	ENSGACG00000001075	ENSGACG00000001073	si:ch211-191j22.3 (ENSGACG00000001072)	ENSGACG00000001066	zgc:101664 (ENSGACG00000001064)	pik3r1 (ENSGACG00000001062)
Lumpfish	MODERN SPECIES	24	ENSCLMG00005006049	ENSCLMG00005006050	ENSCLMG00005006056	ENSCLMG00005006717	ENSCLMG00005006718	ENSCLMG00005006720	ppiab (ENSCLMG00005006729)	ENSCLMG00005006732	ENSCLMG00005006733	OGDH (ENSCLMG00005006742)	adam9 (ENSCLMG00005006833)	ercc6l (ENSCLMG00005006902)	srp19 (ENSCLMG00005006903)	ENSCLMG00005006905	ENSCLMG00005006908	ENSCLMG00005006913 #22	ENSCLMG00005006925	ENSCLMG00005006930	ENSCLMG00005006933	mak16 (ENSCLMG00005006936)	ENSCLMG00005006944	ENSCLMG00005006973	ENSCLMG00005008815	ENSCLMG00005008818	nudt18 (ENSCLMG00005008819) #24	ENSCLMG00005008821	si:ch211-191j22.3 (ENSCLMG00005008822)	ENSCLMG00005008824	ENSCLMG00005008828	ENSCLMG00005008830	PIK3R1 (ENSCLMG00005008845)
Tetraodontidae	ANCESTRAL SPECIES	24	ENSGT00940000157488.g	ENSGT00940000165233	ENSGT00940000153745.a.a	ENSGT00390000004149	ENSGT00940000160325.b	ENSGT00730000111371	ENSGT00390000015494	ENSGT00940000156161.B	ENSGT00950000182960.a.b	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00940000167339	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000159352	ENSGT00390000003878	ENSGT00940000155670
Fugu	MODERN SPECIES	13	ncaph (ENSTRUG00000009464)	vamp8 (ENSTRUG00000028330)	vamp5 (ENSTRUG00000025146)	ENSTRUG00000022284	IDUA (ENSTRUG00000010281)	tnksb (ENSTRUG00000010518)	actbc (ENSTRUG00000004099)	ENSTRUG00000030130	ENSTRUG00000028752	ENSTRUG00000003423	pik3r1 (ENSTRUG00000010930)	ENSTRUG00000033074	ENSTRUG00000011169	srp19 (ENSTRUG00000033163)	ENSTRUG00000023119	ENSTRUG00000023223 #22	ENSTRUG00000025700	ENSTRUG00000011399	mak16 (ENSTRUG00000011544)	ENSTRUG00000011666	MFSD14B (ENSTRUG00000011803)	ENSTRUG00000011912	nudt18 (ENSTRUG00000012000) #24	ENSTRUG00000032315	ENSTRUG00000030978	ercc6l (ENSTRUG00000012053)	adam9 (ENSTRUG00000012083)	ENSTRUG00000027155	ENSTRUG00000012273	OGDH (ENSTRUG00000012276)	ZMIZ2 (ENSTRUG00000021623)
Tetraodon	MODERN SPECIES	3	ogfod2 (ENSTNIG00000018867)	SLC4A5 (ENSTNIG00000018868)	zgc:110329 (ENSTNIG00000018869)	TACR1 (ENSTNIG00000018870)	ncaph (ENSTNIG00000018871)	DNAH2 (ENSTNIG00000018872)	ENSTNIG00000000123	ENSTNIG00000018873	IDUA (ENSTNIG00000018874)	tnksb (ENSTNIG00000018875)	ENSTNIG00000018876	ENSTNIG00000018877	pik3r1 (ENSTNIG00000018878)	ENSTNIG00000018879	srp19 (ENSTNIG00000018880)	ENSTNIG00000018881 #22	mak16 (ENSTNIG00000018882)	ENSTNIG00000001834	ENSTNIG00000018883	ENSTNIG00000018884	ercc6l (ENSTNIG00000001002)	adam9 (ENSTNIG00000005857)	ENSTNIG00000005856	OGDH (ENSTNIG00000005855)	ZMIZ2 (ENSTNIG00000005854)	ENSTNIG00000005853	SLC18A1 (ENSTNIG00000005862)	ENSTNIG00000005861	ENSTNIG00000005860	ENSTNIG00000005859	ENSTNIG00000005858
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852	ENSGT00940000159786	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00770000121806.b	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000177802
Ovalentaria_B	ANCESTRAL SPECIES	27	ENSGT00390000009378	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852	ENSGT00940000159786	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352
Pomacentridae	ANCESTRAL SPECIES	26	ENSGT00940000159786	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000164100.A.c.a.d.a.a.a.b.b.a	ENSGT00950000182960.a.b	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00940000177260	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352
Bicolor damselfish	MODERN SPECIES	2155													ENSSPAG00000005248	ENSSPAG00000005240	ENSSPAG00000005198	DMTN (ENSSPAG00000005167) #22	ENSSPAG00000005155	ENSSPAG00000005141	mak16 (ENSSPAG00000005102)	ENSSPAG00000005086	ENSSPAG00000005078
Pomacentridae_A	ANCESTRAL SPECIES	34	ENSGT00940000159786	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00940000164100.A.c.a.d.a.a.a.b.b.a	ENSGT00950000182960.a.b	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00940000177260	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352
Amphiprion	ANCESTRAL SPECIES	40	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00940000164100.A.c.a.d.a.a.a.b.b.a	ENSGT00950000182960.a.b	ENSGT00940000154311.a.b.db.f	ENSGT00940000165390.b.d.db	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00940000177260	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837.h	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352
Orange clownfish	DUPLICATION
Orange clownfish	MODERN SPECIES	19	ENSAPEG00000021870	ENSAPEG00000021924	ENSAPEG00000021929	ENSAPEG00000021942	ENSAPEG00000021964	ENSAPEG00000021999	ENSAPEG00000022005	ENSAPEG00000022026	DMTN (ENSAPEG00000022035) #22	ENSAPEG00000022069	pik3r1 (ENSAPEG00000022087)	ENSAPEG00000022131	ENSAPEG00000022146	srp19 (ENSAPEG00000022170)	ENSAPEG00000022180	ENSAPEG00000022196 #22	ENSAPEG00000022217	mak16 (ENSAPEG00000022237)	ENSAPEG00000022264	ENSAPEG00000022293	ENSAPEG00000022310	ENSAPEG00000022330	ENSAPEG00000022354	nudt18 (ENSAPEG00000022371) #24	ENSAPEG00000022452	ENSAPEG00000022467	si:ch211-191j22.3 (ENSAPEG00000022479)	ercc6l (ENSAPEG00000022499)	ercc6l (ENSAPEG00000022533)	adam9 (ENSAPEG00000022562)	OGDH (ENSAPEG00000022585)
Orange clownfish	MODERN SPECIES	19	nudt18 (ENSAPEG00000022371) #24	ENSAPEG00000022354	ENSAPEG00000022330	ENSAPEG00000022310	ENSAPEG00000022293	ENSAPEG00000022264	mak16 (ENSAPEG00000022237)	ENSAPEG00000022217	ENSAPEG00000022196 #22	ENSAPEG00000022180	srp19 (ENSAPEG00000022170)	ENSAPEG00000022146	ENSAPEG00000022131	pik3r1 (ENSAPEG00000022087)	ENSAPEG00000022069	DMTN (ENSAPEG00000022035) #22	ENSAPEG00000022026	ENSAPEG00000022005	ENSAPEG00000021999	ENSAPEG00000021964	ENSAPEG00000021942	ENSAPEG00000021929	ENSAPEG00000021924	ENSAPEG00000021870	ENSAPEG00000021855	sncaip (ENSAPEG00000021842)	ENSAPEG00000021836	SNX2 (ENSAPEG00000021798)	PPIC (ENSAPEG00000021728)	ENSAPEG00000021653	ENSAPEG00000021634
Spiny chromis	MODERN SPECIES	1230									ENSAPOG00000002284	ENSAPOG00000002274	pik3r1 (ENSAPOG00000002241)	zgc:101664 (ENSAPOG00000002225)	ENSAPOG00000002217	srp19 (ENSAPOG00000002199)	ENSAPOG00000002184	ENSAPOG00000002160 #22
Cichlidae	ANCESTRAL SPECIES	44									ENSGT01100000263483.D.d.a.a.a.b.a.a.b	ENSGT00940000164100.A.c.b.a.a.a.b	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352
Pseudocrenilabrinae	ANCESTRAL SPECIES	35									ENSGT01100000263483.D.d.a.a.a.b.a.a.b	ENSGT00940000164100.A.c.b.a.a.a.b.a.a	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352
Nile tilapia	MODERN SPECIES	3											ENSONIG00000001761	ENSONIG00000035270	pik3r1 (ENSONIG00000001749)	srp19 (ENSONIG00000000542)	ENSONIG00000000544	ENSONIG00000000546 #22	ENSONIG00000031578	ENSONIG00000000558	mak16 (ENSONIG00000035837)	ENSONIG00000028234	ENSONIG00000000572	ENSONIG00000000578	ENSONIG00000000585 #24	ENSONIG00000039914	ENSONIG00000035171	si:ch211-191j22.3 (ENSONIG00000036849)	ENSONIG00000027849	ercc6l (ENSONIG00000034572)	adam9 (ENSONIG00000036175)	ENSONIG00000031450	OGDH (ENSONIG00000000590)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	44									ENSGT01100000263483.D.d.a.a.a.b.a.a.b	ENSGT00940000164100.A.c.b.a.a.a.b.a.a	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000177260	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352
Lyretail cichlid	MODERN SPECIES	519	ENSNBRG00000003245	ENSNBRG00000003160	ENSNBRG00000003116	ENSNBRG00000003092	ENSNBRG00000003083	ENSNBRG00000003060	ENSNBRG00000002998	ENSNBRG00000002983	ENSNBRG00000002967	ENSNBRG00000002957	ENSNBRG00000002940	pik3r1 (ENSNBRG00000002900)	ENSNBRG00000002885	ENSNBRG00000002855	ENSNBRG00000002800	ENSNBRG00000002764 #22	ENSNBRG00000002726	mak16 (ENSNBRG00000002703)	ENSNBRG00000002687	ENSNBRG00000002672	ENSNBRG00000002652	ENSNBRG00000002639
Haplochromini	ANCESTRAL SPECIES	53									ENSGT01100000263483.D.d.a.a.a.b.a.a.b.a.a.a.a	ENSGT00940000164100.A.c.b.a.a.a.b.a.a	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352	ENSGT00760000120401
Burton s mouthbrooder	MODERN SPECIES	867										ENSHBUG00000000157	pik3r1 (ENSHBUG00000006185)	ENSHBUG00000006160	ENSHBUG00000006151	srp19 (ENSHBUG00000006131)	ENSHBUG00000006110	ENSHBUG00000006098 #22	ENSHBUG00000006076	ENSHBUG00000006056	mak16 (ENSHBUG00000006023)	ENSHBUG00000006000	ENSHBUG00000005969	ENSHBUG00000005944
Haplochromini_A	ANCESTRAL SPECIES	60									ENSGT01100000263483.D.d.a.a.a.b.a.a.b.a.a.a.a	ENSGT00940000164100.A.c.b.a.a.a.b.a.a	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352	ENSGT00760000120401
Haplochromini_B	ANCESTRAL SPECIES	69									ENSGT01100000263483.D.d.a.a.a.b.a.a.b.a.a.a.a	ENSGT00940000164100.A.c.b.a.a.a.b.a.a	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352	ENSGT00760000120401
Zebra mbuna	MODERN SPECIES	1094	adam9 (ENSMZEG00005000905)	ENSMZEG00005001545	ercc6l (ENSMZEG00005001556)	si:ch211-191j22.3 (ENSMZEG00005001564)	ENSMZEG00005001572	nudt18 (ENSMZEG00005001576) #24	ENSMZEG00005001587	ENSMZEG00005001596	ENSMZEG00005001615	ENSMZEG00005001649	pik3r1 (ENSMZEG00005001670)	ENSMZEG00005001719	ENSMZEG00005001732	srp19 (ENSMZEG00005001765)	ENSMZEG00005001787	ENSMZEG00005001854 #22	ENSMZEG00005001870	ENSMZEG00005001885	mak16 (ENSMZEG00005001916)	ENSMZEG00005001955	ENSMZEG00005001977	ENSMZEG00005002027	ENSMZEG00005002038	ENSMZEG00005002051	ENSMZEG00005002061	ENSMZEG00005002116	ENSMZEG00005002150
Eastern happy	MODERN SPECIES	3	ENSACLG00000005592	ENSACLG00000005600	ENSACLG00000005625	ENSACLG00000005627	ENSACLG00000005638	ENSACLG00000005652	ENSACLG00000005659	ENSACLG00000005669	ENSACLG00000005679	ENSACLG00000005680	pik3r1 (ENSACLG00000006175)	ENSACLG00000006211	ENSACLG00000006234	srp19 (ENSACLG00000006259)	ENSACLG00000006289	ENSACLG00000006299 #22	ENSACLG00000006314	ENSACLG00000006329	mak16 (ENSACLG00000006342)	ENSACLG00000006356	ENSACLG00000006372	ENSACLG00000006394	ENSACLG00000006421	nudt18 (ENSACLG00000006434) #24	ENSACLG00000006499	si:ch211-191j22.3 (ENSACLG00000006533)	ercc6l (ENSACLG00000006555)	adam9 (ENSACLG00000007282)	OGDH (ENSACLG00000007335)	ENSACLG00000007416	ENSACLG00000007444
Midas cichlid	MODERN SPECIES	13			ENSACIG00000005234	ENSACIG00000005223	ENSACIG00000005215	ENSACIG00000005208	ENSACIG00000005203	ENSACIG00000005198	ENSACIG00000005185	pik3r1 (ENSACIG00000005149)	zgc:101664 (ENSACIG00000005120)	ENSACIG00000005098	srp19 (ENSACIG00000005082)	ENSACIG00000005022	ENSACIG00000005016	DMTN (ENSACIG00000005003) #22	ENSACIG00000004993	ENSACIG00000004978	mak16 (ENSACIG00000004962)	ENSACIG00000004949	ENSACIG00000004922	ENSACIG00000004907	ENSACIG00000004901	nudt18 (ENSACIG00000004827) #24	ENSACIG00000004815	si:ch211-191j22.3 (ENSACIG00000004804)	ENSACIG00000004790	adam9 (ENSACIG00000004568)	OGDH (ENSACIG00000004510)	ZMIZ2 (ENSACIG00000004466)	ENSACIG00000004459
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT01100000263483.D.d.a.a.a.a.f.b.b	ENSGT00950000182960.a.a.a.a	ENSGT00950000182960.a.b	ENSGT01100000263483.D.d.a.a.a.a.f.a.a	ENSGT00940000164100.A.c.b.b.e.b	ENSGT00940000177061	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00940000177260	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000177802
Oryzias	ANCESTRAL SPECIES	83											ENSGT00940000164876.a	ENSGT00940000155188.B.b	ENSGT00390000004950	ENSGT00550000074618.b	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837
Oryzias_b	ANCESTRAL SPECIES	79											ENSGT00940000164876.a	ENSGT00940000155188.B.b	ENSGT00390000004950	ENSGT00550000074618.b	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000154821.a.b	ENSGT00940000156085	ENSGT01070000253744.b.b.e	ENSGT00940000156290.a	ENSGT00940000156035.z	ENSGT00940000165677
Indian medaka	MODERN SPECIES	754	wsb1 (ENSOMEG00000008904)	pipox (ENSOMEG00000008917)	PHF12 (ENSOMEG00000000222)	ENSOMEG00000008973	dhrs13b.1 (ENSOMEG00000008979)	dhrs13a.3 (ENSOMEG00000008999)	ENSOMEG00000009010	ENSOMEG00000009030	ENSOMEG00000009081	ENSOMEG00000009100	ENSOMEG00000009115	tncb (ENSOMEG00000009149)	srp19 (ENSOMEG00000009178)	ENSOMEG00000009200	ENSOMEG00000009229	ENSOMEG00000009267 #22	ENSOMEG00000009290	mak16 (ENSOMEG00000009317)	ENSOMEG00000009345	ENSOMEG00000009382	ENSOMEG00000009414	ENSOMEG00000009423	nudt18 (ENSOMEG00000009443) #24	ENSOMEG00000009458	si:ch211-191j22.3 (ENSOMEG00000009470)	ercc6l (ENSOMEG00000009481)	ENSOMEG00000009489	ENSOMEG00000009500	ENSOMEG00000009736	ENSOMEG00000009814	ENSOMEG00000009825
Javanese ricefish	MODERN SPECIES	23	ENSOJAG00000002611	ENSOJAG00000002536	ercc6l (ENSOJAG00000002485)	ENSOJAG00000002471	ENSOJAG00000002462	nudt18 (ENSOJAG00000002453) #24	ENSOJAG00000002445	ENSOJAG00000008033	ENSOJAG00000007931	ENSOJAG00000007889	tncb (ENSOJAG00000004606)	ENSOJAG00000003981	srp19 (ENSOJAG00000003972)	ENSOJAG00000003936	ENSOJAG00000003921	ENSOJAG00000003858 #22	ENSOJAG00000003833	ENSOJAG00000003796	ENSOJAG00000003767	camsap1b (ENSOJAG00000003465)	ubac1 (ENSOJAG00000003406)	inpp5e (ENSOJAG00000002863)	PTGS1 (ENSOJAG00000002196)	LHX6 (ENSOJAG00000001953)	krt1-c5 (ENSOJAG00000001936)	ENSOJAG00000001912	tal2 (ENSOJAG00000001890)	ugt2b5 (ENSOJAG00000001871)	ENSOJAG00000001853	RAB27B (ENSOJAG00000001841)	ST8SIA3 (ENSOJAG00000001828)
Oryzias_a	ANCESTRAL SPECIES	122											ENSGT00940000164876.a	ENSGT00940000155188.B.b.a	ENSGT00390000004950	ENSGT00550000074618.b	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00940000156837
Japanese Medaka HdrR	MODERN SPECIES	23										ENSORLG00000021820	tncb (ENSORLG00000024985)	ENSORLG00000030312	srp19 (ENSORLG00000028267)	ENSORLG00000022745	ENSORLG00000025060	ENSORLG00000028241 #22	ENSORLG00000022056	ENSORLG00000029921	mak16 (ENSORLG00000019058)	ENSORLG00000027850	spinb (ENSORLG00000030180)	ENSORLG00000019781	ENSORLG00000027770	nudt18 (ENSORLG00000028154) #24	ENSORLG00000025280	ercc6l (ENSORLG00000024240)	si:ch211-191j22.3 (ENSORLG00000026703)	ftcd (ENSORLG00000018636)	fxn (ENSORLG00000030340)	ENSORLG00000018611	RUSC2 (ENSORLG00000023472)
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00770000121806.b	ENSGT00940000154311.b	ENSGT00940000165390.b.d	ENSGT00940000160570	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00940000177260	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000177802
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00940000155798	ENSGT00940000159470	ENSGT00390000001485	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT00940000164100.A.c.b.b.e.a.b	ENSGT00940000165390.b.d	ENSGT00940000160570	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00940000177260	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352
Poeciliinae	ANCESTRAL SPECIES	38		ENSGT00940000164100.A.d	ENSGT00950000182960.a.b.n	ENSGT00940000166560	ENSGT01100000263483.D.d.a.a.a.b.b	ENSGT01100000263483.D.d.a.a.a.a.f.a.a.a	ENSGT00940000164100.A.c.b.b.e.a.b	ENSGT00940000165390.b.d	ENSGT00940000160570	ENSGT00940000153246.b	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT01100000264050	ENSGT00610000087474	ENSGT00940000177260	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000159352
Poecilia	ANCESTRAL SPECIES																	ENSGT00950000182850.a.b.b.a #22
NAME_6	ANCESTRAL SPECIES																	ENSGT00950000182850.a.b.b.a #22
Amazon molly	MODERN SPECIES	1095																DMTN (ENSPFOG00000001291) #22	ENSPFOG00000001228	ENSPFOG00000001167	mak16 (ENSPFOG00000001068)	ENSPFOG00000000999	ENSPFOG00000000865
Sailfin molly	MODERN SPECIES	1882																DMTN (ENSPLAG00000000530) #22	ENSPLAG00000022484	ENSPLAG00000022515	mak16 (ENSPLAG00000022551)	ENSPLAG00000022582	ENSPLAG00000022628	ENSPLAG00000022663
Platyfish	MODERN SPECIES	3	ENSXMAG00000027923	ENSXMAG00000026149	ENSXMAG00000015179	ENSXMAG00000015170	ENSXMAG00000029634	ENSXMAG00000025223	ENSXMAG00000023783	ENSXMAG00000015158	ENSXMAG00000015148	ENSXMAG00000021944	pik3r1 (ENSXMAG00000015104)	ENSXMAG00000015103	ENSXMAG00000025052	srp19 (ENSXMAG00000029788)	ENSXMAG00000025608	DMTN (ENSXMAG00000029276) #22	ENSXMAG00000000652	ENSXMAG00000015075	mak16 (ENSXMAG00000029335)	ENSXMAG00000015031	ENSXMAG00000015027	ENSXMAG00000015001	ENSXMAG00000027258	nudt18 (ENSXMAG00000015000) #24	ENSXMAG00000019886	si:ch211-191j22.3 (ENSXMAG00000014998)	ENSXMAG00000024111	ercc6l (ENSXMAG00000000948)	adam9 (ENSXMAG00000000901)	OGDH (ENSXMAG00000000877)	ZMIZ2 (ENSXMAG00000004962)
NAME_4	ANCESTRAL SPECIES	143															ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000179723	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT01100000264050	ENSGT00940000177260	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j
Mummichog	MODERN SPECIES	422															ENSFHEG00000007001	DMTN (ENSFHEG00000007017) #22	ENSFHEG00000000695	mak16 (ENSFHEG00000007084)	ENSFHEG00000007102	MFSD14B (ENSFHEG00000007127)	ENSFHEG00000007131	ENSFHEG00000007143	ENSFHEG00000007164 #24	ENSFHEG00000007177	ENSFHEG00000007193	si:ch211-191j22.3 (ENSFHEG00000007197)	ercc6l (ENSFHEG00000007205)	ercc6l (ENSFHEG00000007269)	ENSFHEG00000007279	adam9 (ENSFHEG00000007313)	OGDH (ENSFHEG00000007381)
Aplocheiloidei	ANCESTRAL SPECIES	45	ENSGT00940000154779.a.b.b	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT01100000263483.D.d.a.a.a.a.f.b.b	ENSGT00950000182960.a.b	ENSGT01100000263483.D.d.a.a.a.a.f.a.a.a	ENSGT00940000164100.A.c.b.b.e.a.b	ENSGT00940000165390.b.d	ENSGT00940000160570	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00390000012859	ENSGT00950000182925.B.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000176961	ENSGT00390000002931 #24	ENSGT00980000198657	ENSGT00610000087474	ENSGT00940000156837	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.b	ENSGT01030000234539.b.b.a.j	ENSGT00940000165894.b	ENSGT00940000177802	ENSGT00940000159352
Mangrove rivulus	MODERN SPECIES	189	ENSKMAG00000010779	ENSKMAG00000010796	ENSKMAG00000010820	ENSKMAG00000010832	ENSKMAG00000010851	ENSKMAG00000010882	ENSKMAG00000010997	ENSKMAG00000011012	ENSKMAG00000011025	ENSKMAG00000011036	pik3r1 (ENSKMAG00000011062)	ENSKMAG00000011118	ENSKMAG00000011131	srp19 (ENSKMAG00000011155)	ENSKMAG00000011190	ENSKMAG00000011242 #22	ENSKMAG00000011271	ENSKMAG00000011301	mak16 (ENSKMAG00000011338)	ENSKMAG00000011371	ENSKMAG00000011395	ENSKMAG00000011422	ENSKMAG00000011441	ENSKMAG00000011460	nudt18 (ENSKMAG00000011494) #24	ENSKMAG00000011561	si:ch211-191j22.3 (ENSKMAG00000011571)	ercc6l (ENSKMAG00000011587)	ENSKMAG00000011613	ENSKMAG00000011628	ENSKMAG00000011662
Turquoise killifish	MODERN SPECIES	1620	ENSNFUG00015006529	ENSNFUG00015006525	ENSNFUG00015006522	ENSNFUG00015006513	ENSNFUG00015006466	ENSNFUG00015006447	ENSNFUG00015006432	ENSNFUG00015006423	ENSNFUG00015006407	ENSNFUG00015006396	pik3r1 (ENSNFUG00015005727)	ENSNFUG00015005603	OLA.5773 (ENSNFUG00015005600)	SRP19 (ENSNFUG00015005596)	ENSNFUG00015005586	ENSNFUG00015005579 #22	ENSNFUG00015005545	mak16 (ENSNFUG00015005506)	SPINA (ENSNFUG00015005491)	ENSNFUG00015005414	ENSNFUG00015005383	ENSNFUG00015005375	nudt18 (ENSNFUG00015005363) #24	ENSNFUG00015005357	si:ch211-191j22.3 (ENSNFUG00015005343)	ercc6l (ENSNFUG00015005299)	ENSNFUG00015005173	OGDH (ENSNFUG00015005105)	ZMIZ2 (ENSNFUG00015005083)	ENSNFUG00015005065	ENSNFUG00015005053
Cod	MODERN SPECIES	19	ENSGMOG00000024175	ENSGMOG00000031281	ENSGMOG00000031253	ENSGMOG00000026884	ENSGMOG00000012029	ENSGMOG00000025497	ENSGMOG00000028623	OGDH (ENSGMOG00000012010)	ENSGMOG00000011997	ENSGMOG00000024993	ENSGMOG00000022934	ENSGMOG00000032021	ENSGMOG00000036467	ENSGMOG00000000735 #24	ENSGMOG00000000716	ENSGMOG00000013926 #22	ENSGMOG00000034033	ENSGMOG00000027738	ENSGMOG00000033429	ENSGMOG00000034651	ENSGMOG00000000532	ENSGMOG00000000511	ENSGMOG00000027650	ENSGMOG00000012563	ENSGMOG00000008583	ENSGMOG00000000426	ENSGMOG00000003264	ENSGMOG00000003281	zgc:101664 (ENSGMOG00000003300)	ENSGMOG00000003321	ENSGMOG00000037248
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	445															ENSGT00940000167390	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239	ENSGT00940000164380.b
Clupeocephala	ANCESTRAL SPECIES	80	ENSGT00940000157488.h	ENSGT00950000183012.A.a.c.a	ENSGT00950000182825.B	ENSGT00940000167011	ENSGT00940000156317.w.a	ENSGT00940000161102	ENSGT00900000140979.b	ENSGT00940000167350	ENSGT00940000158490	ENSGT00940000165439	ENSGT00390000011179	ENSGT00940000158444	ENSGT00940000156481.b	ENSGT00950000183125.b.a.a.a.a.a	ENSGT00390000003652.d	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.a.b	ENSGT01030000234539.b.b.a.i	ENSGT00940000165894.b	ENSGT00940000159152.d	ENSGT00940000158107.a.a	ENSGT00940000164321.d	ENSGT00390000010474	ENSGT00940000166967	ENSGT00940000158323.g	ENSGT00550000074946	ENSGT00530000063672.b
Otomorpha	ANCESTRAL SPECIES	325						ENSGT00390000006780	ENSGT00940000158323.h	ENSGT00390000009488	ENSGT00940000155477	ENSGT00940000164321.c	ENSGT00730000111133	ENSGT00940000158936	ENSGT00940000158107.a.b	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a #22	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.a.b	ENSGT00940000165894.a	ENSGT00940000177802	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00490000043388.a
Otophysi	ANCESTRAL SPECIES	188	ENSGT00950000183127.c.b.c.c.a	ENSGT00940000161847.b.a.e.b.a.a	ENSGT00940000154637	ENSGT00940000171034	ENSGT00390000013684	ENSGT00730000111077	ENSGT00390000006780	ENSGT00940000158323.h	ENSGT00390000009488	ENSGT00940000155477	ENSGT00940000164321.c	ENSGT00730000111133	ENSGT00940000158936	ENSGT00940000158107.a.b	ENSGT00500000044989	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.a.b	ENSGT00940000165894.a	ENSGT00940000177802	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00490000043388.a
Characiphysae	ANCESTRAL SPECIES	106	ENSGT00940000161847.b.a.e.b.b.a	ENSGT00950000183127.c.b.c.c.a	ENSGT00940000161847.b.a.e.b.b.b	ENSGT00940000154637	ENSGT00390000013684	ENSGT00730000111077	ENSGT00390000006780	ENSGT00940000158323.h	ENSGT00390000009488	ENSGT00940000155477	ENSGT00940000164321.c	ENSGT00730000111133	ENSGT00940000158936	ENSGT00940000158107.a.b	ENSGT00500000044989	ENSGT00950000182850.a.b.b.b.a #22	ENSGT01050000245296	ENSGT00940000154184.A	ENSGT00940000160048	ENSGT00940000159868.b #18	ENSGT00940000156168.B #17	ENSGT00940000154078.a.b	ENSGT00940000156515.a	ENSGT00940000179951	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B	ENSGT00940000154885.A.f	ENSGT00940000164508	ENSGT00940000165280.a.a	ENSGT00390000007349.b
Channel catfish	MODERN SPECIES	24	ENSIPUG00000002674	ENSIPUG00000002600	ENSIPUG00000002514	ENSIPUG00000002508	sf3a1 (ENSIPUG00000002470)	pold2 (ENSIPUG00000002459)	ENSIPUG00000002439	elmod3 (ENSIPUG00000002413)	star (ENSIPUG00000002357)	ENSIPUG00000002325	ENSIPUG00000002320	LSM1 (ENSIPUG00000002312)	bag4 (ENSIPUG00000002306)	DUSP26 (ENSIPUG00000002301)	rsph14 (ENSIPUG00000002293)	DMTN (ENSIPUG00000002277) #22	ENSIPUG00000002264	ENSIPUG00000002252	crybb2 (ENSIPUG00000002243)	kazald3 (ENSIPUG00000002231)	Dok2 (ENSIPUG00000002223) #18	ENSIPUG00000002216	ENSIPUG00000002208	ENSIPUG00000002185	ENSIPUG00000002177	ENSIPUG00000002166 #17	ENSIPUG00000002038	ENSIPUG00000002005	msi1 (ENSIPUG00000001976)	ENSIPUG00000001969	TMEM233 (ENSIPUG00000001967)
Characiphysae_b	ANCESTRAL SPECIES	95	ENSGT00940000161847.b.a.e.b.b.a	ENSGT00950000183127.c.b.c.c.a	ENSGT00940000161847.b.a.e.b.b.b	ENSGT00940000154637	ENSGT00390000013684	ENSGT00730000111077	ENSGT00390000006780	ENSGT00940000158323.h	ENSGT00390000009488	ENSGT00940000155477	ENSGT00940000164321.c	ENSGT00730000111133	ENSGT00940000158936	ENSGT00940000158107.a.b	ENSGT00500000044989	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00940000160048	ENSGT00940000159868.b #18	ENSGT00940000156168.B #17	ENSGT00940000154078.a.b	ENSGT00940000156515.a	ENSGT00940000179951	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B	ENSGT00940000154885.A.f	ENSGT00940000164508	ENSGT00940000165280.a.a	ENSGT00390000007349.b	ENSGT01030000235079	ENSGT00940000153818.a.b.a.a
Characoidei	ANCESTRAL SPECIES	88	ENSGT00940000161847.b.a.e.b.b.b.a.b	ENSGT00950000183127.c.b.c.c.a	ENSGT00940000161847.b.a.e.b.b.b.a.a	ENSGT00940000154637	ENSGT00390000013684	ENSGT00730000111077	ENSGT00390000006780	ENSGT00940000158323.h	ENSGT00390000009488	ENSGT00940000155477	ENSGT00940000164321.c	ENSGT00730000111133	ENSGT00940000158936	ENSGT00940000158107.a.b	ENSGT00500000044989	ENSGT00950000182850.a.b.b.b.a #22	ENSGT01050000245296	ENSGT00940000154184.A	ENSGT00940000162556.G.c.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00940000160048	ENSGT00940000154078.a.b	ENSGT00940000156515.a	ENSGT00940000179951	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B	ENSGT00940000154885.A.f	ENSGT00940000164508	ENSGT00940000165280.a.a	ENSGT00390000007349.b
Red-bellied piranha	MODERN SPECIES	712																DMTN (ENSPNAG00000009696) #22	ENSPNAG00000009387	ENSPNAG00000001311	ENSPNAG00000009353	ENSPNAG00000009342	crybb2 (ENSPNAG00000009334)	kazald3 (ENSPNAG00000004671)	ENSPNAG00000029686
Mexicana tetra	MODERN SPECIES	21	ENSAMXG00000005227	ENSAMXG00000005248	slc7a4 (ENSAMXG00000039335)	ENSAMXG00000005291	ENSAMXG00000038773	sf3a1 (ENSAMXG00000005382)	pold2 (ENSAMXG00000005390)	ENSAMXG00000005403	ELMOD3 (ENSAMXG00000005425)	star (ENSAMXG00000005430)	ENSAMXG00000005436	lsm1 (ENSAMXG00000005441)	bag4 (ENSAMXG00000005454)	DUSP26 (ENSAMXG00000005462)	rsph14 (ENSAMXG00000040467)	DMTN (ENSAMXG00000005473) #22	ENSAMXG00000030981	ENSAMXG00000041211	ENSAMXG00000041781	ENSAMXG00000005496	ENSAMXG00000041066	crybb2 (ENSAMXG00000005503)	kazald3 (ENSAMXG00000034815)	DOK2 (ENSAMXG00000034671) #18	gfra2a (ENSAMXG00000039901) #17	LZTS1 (ENSAMXG00000033716)	msi1b (ENSAMXG00000038960)	ENSAMXG00000033355	ENSAMXG00000030431	TMEM233 (ENSAMXG00000031722)	prkab1b (ENSAMXG00000005605)
Electric eel	MODERN SPECIES	1010														DUSP26 (ENSEEEG00000008417)	rsph14 (ENSEEEG00000008418)	DMTN (ENSEEEG00000008421) #22	ENSEEEG00000008424	ENSEEEG00000008425	kazald3 (ENSEEEG00000008426)	ENSEEEG00000008428
Cyprinoidei	ANCESTRAL SPECIES	47	ENSGT00390000003453.a.c	ENSGT00940000158379	ENSGT00940000178229	ENSGT01060000248556.A.a.a.a.b.b	ENSGT00390000017780.e	ENSGT00390000008631.b	ENSGT00940000166169	ENSGT00940000158323.h	ENSGT00390000009488	ENSGT00940000155477	ENSGT00940000164321.c	ENSGT00730000111133	ENSGT00940000158936	ENSGT00940000158107.a.b	ENSGT00500000044989	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931.d #24	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.a.b	ENSGT00940000165894.a	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT01090000260040.b.a.b.ab.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	1539																ENSGT00950000182850.a.b.b.b.a.a #22	ENSGT00950000183067.a.b.b.jc.a
Cyprininae_a	ANCESTRAL SPECIES	314																ENSGT00950000182850.a.b.b.b.a.a #22	ENSGT00950000183067.a.b.b.jc.b	ENSGT00950000182850.a.b.b.b.a.b.a #22	ENSGT00950000182936.a.b.b.cb #23	ENSGT00390000002931.d.a.a #24	ENSGT00940000156239.l	ENSGT00950000183125.b.a.a.a.a.b.a	ENSGT00940000165894.a.g	ENSGT00940000159352.d	ENSGT00390000003878.e	ENSGT00390000012859.a	ENSGT00940000154285.a.b.b.b.h.a	ENSGT01090000260040.b.a.b.ab.b	ENSGT00390000001804.kb.a	ENSGT00940000154663.a.a.a	ENSGT00940000157106.g.a.b
Common carp reference	DUPLICATION
Common carp reference	MODERN SPECIES	23	ubap2b (ENSCCRG00000064935)	ENSCCRG00000046702	zgc:154046 (ENSCCRG00000046719)	timm17b (ENSCCRG00000019508)	praf2 (ENSCCRG00000064201)	ENSCCRG00000053910	ENSCCRG00000074957	ENSCCRG00000046751	ENSCCRG00000017929	ENSCCRG00000005458	ENSCCRG00000008278	star (ENSCCRG00000008294)	ENSCCRG00000073368	lsm1 (ENSCCRG00000025434)	bag4 (ENSCCRG00000066866)	DMTN (ENSCCRG00000079669) #22	ENSCCRG00000077845	fhip2b (ENSCCRG00000012829) #23	NUDT18 (ENSCCRG00000072588) #24	nudt18 (ENSCCRG00000075801) #24	adam9 (ENSCCRG00000012815)	ENSCCRG00000006669	ppiaa (ENSCCRG00000076657)	ENSCCRG00000017465	ENSCCRG00000068595	ENSCCRG00000065260	ENSCCRG00000081910	ENSCCRG00000074516	ENSCCRG00000047245	ENSCCRG00000036590	ENSCCRG00000068108
Common carp reference	MODERN SPECIES	17	ubap2b (ENSCCRG00000043930)	ENSCCRG00000010127	ENSCCRG00000010130	zgc:154046 (ENSCCRG00000010184)	timm17b (ENSCCRG00000078372)	praf2 (ENSCCRG00000029553)	ENSCCRG00000069860	ENSCCRG00000041041	ENSCCRG00000021822	ENSCCRG00000049424	star (ENSCCRG00000062266)	ENSCCRG00000008323	lsm1 (ENSCCRG00000046684)	bag4 (ENSCCRG00000053756)	ENSCCRG00000046688	DMTN (ENSCCRG00000046695) #22	ENSCCRG00000077854	fhip2b (ENSCCRG00000053957) #23	nudt18 (ENSCCRG00000012826) #24	adam9 (ENSCCRG00000012766)	ENSCCRG00000029321	ppiaa (ENSCCRG00000007958)	ENSCCRG00000038399	ENSCCRG00000040925	ENSCCRG00000017564	ENSCCRG00000082170	ENSCCRG00000022767	ywhabb (ENSCCRG00000068705)	ENSCCRG00000000281	ENSCCRG00000000226	ENSCCRG00000077469
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	605																ENSGT00950000182850.a.b.b.b.a.b.a #22	ENSGT00950000183067.a.b.b.jc.b	ENSGT00950000182936.a.b.b.cb #23	ENSGT00390000002931.d.a.a #24	ENSGT00940000156239.l	ENSGT00950000183125.b.a.a.a.a.b.a	ENSGT00940000165894.a.g	ENSGT00940000159352.d	ENSGT00390000003878.e	ENSGT00390000012859.a	ENSGT00940000154285.a.b.b.b.h.a	ENSGT01090000260040.b.a.b.ab.b	ENSGT00390000001804.kb.a	ENSGT00940000154663.a.a.b.b	ENSGT00940000157106.g.a.b	ENSGT00940000157936.p.b
Cyprininae_a	ANCESTRAL SPECIES	314														ENSGT00950000182850.a.b.b.b.a.a #22	ENSGT00950000183067.a.b.b.jc.b	ENSGT00950000182850.a.b.b.b.a.b.a #22	ENSGT00950000182936.a.b.b.cb #23	ENSGT00390000002931.d.a.a #24	ENSGT00940000156239.l	ENSGT00950000183125.b.a.a.a.a.b.a	ENSGT00940000165894.a.g	ENSGT00940000159352.d	ENSGT00390000003878.e	ENSGT00390000012859.a	ENSGT00940000154285.a.b.b.b.h.a	ENSGT01090000260040.b.a.b.ab.b	ENSGT00390000001804.kb.a	ENSGT00940000154663.a.a.a	ENSGT00940000157106.g.a.b	ENSGT00940000157936.p.b	ENSGT00940000153391.c.b.a.j.a.d
Golden-line barbel	MODERN SPECIES	1960																DMTN (ENSSGRG00000013394) #22	fhip2b (ENSSGRG00000013398) #23	ENSSGRG00000013400
Goldfish	MODERN SPECIES	2832	ENSCARG00000055907	rfk (ENSCARG00000055899)	pcsk5b (ENSCARG00000051874)	ubap2b (ENSCARG00000051643)	ENSCARG00000051026	zgc:154046 (ENSCARG00000047720)	praf2 (ENSCARG00000047567)	ENSCARG00000047371	AEBP1 (ENSCARG00000046981)	ELMOD3 (ENSCARG00000046948)	star (ENSCARG00000046900)	ENSCARG00000046750	lsm1 (ENSCARG00000046705)	bag4 (ENSCARG00000046693)	DUSP26 (ENSCARG00000046682)	DMTN (ENSCARG00000046634) #22	ENSCARG00000046618	fhip2b (ENSCARG00000046578) #23	ENSCARG00000046546	nudt18 (ENSCARG00000046536) #24	adam9 (ENSCARG00000046331)	ENSCARG00000045228	ENSCARG00000045182	ppiaa (ENSCARG00000045152)	SLC18A1 (ENSCARG00000044873)	TTI2 (ENSCARG00000044841)	mak16 (ENSCARG00000044828)	ENSCARG00000044817	ywhabb (ENSCARG00000044796)	EIF2S2 (ENSCARG00000044765)	chmp4bb (ENSCARG00000044736)
Cyprininae	ANCESTRAL SPECIES	202	ENSGT00390000003453.a.c.b	ENSGT01060000248556.A.a.a.a.b.b.a	ENSGT00390000017780.e.x	ENSGT00390000008631.b.b	ENSGT00940000154755.lb.b	ENSGT00940000158323.h.b	ENSGT00390000009488.a	ENSGT00940000155477.a	ENSGT00940000164321.c.k	ENSGT00940000164321.c.l.b	ENSGT00730000111133.y	ENSGT00940000158936.a	ENSGT00940000158936.b	ENSGT00940000158107.a.b	ENSGT00500000044989	ENSGT00950000182850.a.b.b.b.a.b.b #22	ENSGT00950000182936.a.b.b.bb #23	ENSGT00390000002931.c #24	ENSGT00390000002931.d.b #24	ENSGT00940000156239.k	ENSGT00950000183125.b.a.a.a.a.b.b	ENSGT00940000165894.a.h	ENSGT00940000159352.c	ENSGT00390000012859.b	ENSGT01090000260040.b.a.b.ab.a	ENSGT00390000001804.kb.b	ENSGT00940000154663.a.a.b.a	ENSGT00940000157106.g.a.a	ENSGT00940000157936.p.a	ENSGT00940000153391.c.b.a.j.a.c	ENSGT00940000161534.cc
Cyprininae_a	ANCESTRAL SPECIES	96	ENSGT00390000003453.a.c.b	ENSGT00940000158379.j	ENSGT01060000248556.A.a.a.a.b.b.a	ENSGT00390000017780.e.x	ENSGT00390000008631.b.b	ENSGT00940000154755.lb.b	ENSGT00940000158323.h.b	ENSGT00390000009488.a	ENSGT00940000155477.a	ENSGT00940000164321.c.k	ENSGT00730000111133.y	ENSGT00940000158936.a	ENSGT00940000158936.b	ENSGT00940000158107.a.b	ENSGT00500000044989	ENSGT00950000182850.a.b.b.b.a.b.b #22	ENSGT00950000182936.a.b.b.bb #23	ENSGT00390000002931.c #24	ENSGT00390000002931.d.b #24	ENSGT00940000156239.k	ENSGT00950000183125.b.a.a.a.a.b.b	ENSGT00940000165894.a.h	ENSGT00940000159352.c	ENSGT00390000012859.b	ENSGT01090000260040.b.a.b.ab.a	ENSGT00390000001804.kb.b	ENSGT00940000154663.a.a.b.a	ENSGT00940000157106.g.a.a	ENSGT00940000157936.p.a	ENSGT00940000153391.c.b.a.j.a.c	ENSGT00940000161534.cc
Golden-line barbel	MODERN SPECIES	1659						ENSSGRG00000025360	ENSSGRG00000025347	ELMOD3 (ENSSGRG00000025334)	star (ENSSGRG00000025328)	ENSSGRG00000025327	ENSSGRG00000025326	lsm1 (ENSSGRG00000025320)	bag4 (ENSSGRG00000025318)	DUSP26 (ENSSGRG00000025317)	rsph14 (ENSSGRG00000025316)	DMTN (ENSSGRG00000025315) #22	ENSSGRG00000025310 #23
Goldfish	MODERN SPECIES	48	FOXB2 (ENSCARG00000028735)	rfk (ENSCARG00000028727)	pcsk5b (ENSCARG00000022295)	ubap2b (ENSCARG00000022036)	zgc:154046 (ENSCARG00000021561)	timm17b (ENSCARG00000021523)	praf2 (ENSCARG00000021505)	ENSCARG00000021499	ENSCARG00000021479	ENSCARG00000021181	ELMOD3 (ENSCARG00000021145)	star (ENSCARG00000021129)	ENSCARG00000020812	bag4 (ENSCARG00000020781)	rsph14 (ENSCARG00000020769)	DMTN (ENSCARG00000020748) #22	ENSCARG00000020711	lsm1 (ENSCARG00000020691)	ENSCARG00000020666	fhip2b (ENSCARG00000020605) #23	NUDT18 (ENSCARG00000020590) #24	adam9 (ENSCARG00000020205)	OGDH (ENSCARG00000018398)	ppiaa (ENSCARG00000018264)	SLC18A1 (ENSCARG00000018158)	mak16 (ENSCARG00000018140)	ENSCARG00000018005	YWHAB (ENSCARG00000017971)	ENSCARG00000017930	chmp4bb (ENSCARG00000017916)	pabpc1l (ENSCARG00000017880)
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00950000182850.a.b.b.b.a #22
Protacanthopterygii	ANCESTRAL SPECIES	140					ENSGT00940000155591.i	ENSGT00940000159729.k	ENSGT00390000014476	ENSGT00940000160428.b.a.b	ENSGT00550000075041	ENSGT00940000164784	ENSGT00390000014148.f	ENSGT00940000156231.o.b	ENSGT00940000158016.c.a.a	ENSGT00940000159868.b #18	ENSGT00500000044989	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00950000183067.a.b.b	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239	ENSGT00940000165894.a	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00950000182925.A	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000004950.b	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b
Salmoninae	ANCESTRAL SPECIES	200			ENSGT00940000156744.o.a.b	ENSGT00940000161616.c.r	ENSGT00940000155670	ENSGT00940000155178.ce	ENSGT00940000155434	ENSGT00390000014476	ENSGT00940000160428.b.a.b	ENSGT00550000075041	ENSGT00940000164784	ENSGT00390000014148.f	ENSGT00940000158016.c.a.a	ENSGT00940000159868.b #18	ENSGT00500000044989	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00950000183067.a.b.b.vb.a	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.a.b.c	ENSGT01030000234539.b.b.a.i.n	ENSGT00940000177802	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00950000182925.A.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000155553.e.b	ENSGT00530000065159
Huchen	MODERN SPECIES	103	PRDM12 (ENSHHUG00000015277)	C5 (ENSHHUG00000014930)	rab14 (ENSHHUG00000014856)	ENSHHUG00000014846	ENSHHUG00000014825	ENSHHUG00000014744	cfap77 (ENSHHUG00000014738)	BARHL1 (ENSHHUG00000014735)	DDX31 (ENSHHUG00000014728)	ak8 (ENSHHUG00000014699)	tsc1a (ENSHHUG00000014664)	grin1b (ENSHHUG00000014425)	kazald3 (ENSHHUG00000014412)	ENSHHUG00000014407 #18	rsph14 (ENSHHUG00000014392)	DMTN (ENSHHUG00000014351) #22	ENSHHUG00000014332	fhip2b (ENSHHUG00000014268) #23	nudt18 (ENSHHUG00000014261) #24	adam9 (ENSHHUG00000014071)	OGDH (ENSHHUG00000013738)	ZMIZ2 (ENSHHUG00000013525)	ENSHHUG00000013520
Salmoninae_a	ANCESTRAL SPECIES	47	ENSGT00530000064123.j	ENSGT00940000156744.o.a.b	ENSGT00940000161616.c.r	ENSGT00940000155670	ENSGT00940000155178.ce	ENSGT00940000155434	ENSGT00390000014476	ENSGT00940000160428.b.a.b	ENSGT00550000075041	ENSGT00940000164784	ENSGT00990000211898	ENSGT00390000014148.f	ENSGT00940000158016.c.a.a	ENSGT00940000159868.b #18	ENSGT00500000044989	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00950000183067.a.b.b.vb.a	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.a.b.c	ENSGT01030000234539.b.b.a.i.n	ENSGT00940000177802	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00950000182925.A.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000155553.e.b	ENSGT00530000065159
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00530000064123.j	ENSGT00940000156744.o.a.b	ENSGT00940000161616.c.r	ENSGT00940000155670	ENSGT00940000155178.ce	ENSGT00940000155434	ENSGT00390000014476	ENSGT00940000160428.b.a.b	ENSGT00550000075041	ENSGT00940000164784	ENSGT00990000211898	ENSGT00390000014148.f	ENSGT00940000158016.c.a.a	ENSGT00940000159868.b #18	ENSGT00500000044989	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00950000183067.a.b.b.vb.a	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.a.b.c	ENSGT01030000234539.b.b.a.i.n	ENSGT00940000177802	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00950000182925.A.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000155553.e.b	ENSGT00530000065159
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00940000154416.C.c.a.a.b	ENSGT00530000064123.j	ENSGT00940000156744.o.a.b	ENSGT00940000161616.c.r	ENSGT00940000155670	ENSGT00940000155178.ce	ENSGT00940000155434	ENSGT00390000014476	ENSGT00940000160428.b.a.b	ENSGT00550000075041	ENSGT00940000164784	ENSGT00390000014148.f	ENSGT00940000158016.c.a.a	ENSGT00940000159868.b #18	ENSGT00500000044989	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00950000183067.a.b.b.vb.a	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.a.b.c	ENSGT01030000234539.b.b.a.i.n	ENSGT00940000177802	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00950000182925.A.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000155553.e.b	ENSGT00530000065159
Chinook salmon	MODERN SPECIES	28	ENSOTSG00005000486	ENSOTSG00005000510	rab14 (ENSOTSG00005000513)	ENSOTSG00005000518	ENSOTSG00005000520	cfap77 (ENSOTSG00005000525)	BARHL1 (ENSOTSG00005000527)	DDX31 (ENSOTSG00005000536)	ak8 (ENSOTSG00005000544)	spaca9 (ENSOTSG00005000551)	tsc1a (ENSOTSG00005000557)	grin1b (ENSOTSG00005000582)	kazald3 (ENSOTSG00005000586)	ENSOTSG00005000587 #18	rsph14 (ENSOTSG00005000588)	DMTN (ENSOTSG00005000596) #22	ENSOTSG00005001342	fhip2b (ENSOTSG00005001349) #23	nudt18 (ENSOTSG00005001363) #24	adam9 (ENSOTSG00005001369)	OGDH (ENSOTSG00005001565)	ZMIZ2 (ENSOTSG00005001853)	ENSOTSG00005002057	SLC18A1 (ENSOTSG00005002059)	ENSOTSG00005002065	mak16 (ENSOTSG00005002067)	ENSOTSG00005002072	MFSD14B (ENSOTSG00005002144)	ENSOTSG00005007905	pik3r1 (ENSOTSG00005007908)	zgc:101664 (ENSOTSG00005007917)
Coho salmon	MODERN SPECIES	22	ENSOKIG00005003913	cfap77 (ENSOKIG00005003916)	BARHL1 (ENSOKIG00005003920)	DDX31 (ENSOKIG00005003925)	ak8 (ENSOKIG00005003942)	ENSOKIG00005003990	tsc1a (ENSOKIG00005004031)	ENSOKIG00005004201	ENSOKIG00005004213	grin1b (ENSOKIG00005004383)	kazald3 (ENSOKIG00005004620)	ENSOKIG00005004632 #18	rsph14 (ENSOKIG00005004642)	ENSOKIG00005004653	ENSOKIG00005004662	DMTN (ENSOKIG00005004684) #22	ENSOKIG00005004708	ENSOKIG00005004722	ENSOKIG00005004756	fhip2b (ENSOKIG00005004778) #23	nudt18 (ENSOKIG00005004910) #24	adam9 (ENSOKIG00005005030)	ENSOKIG00005006503	ZMIZ2 (ENSOKIG00005007212)	SLC18A1 (ENSOKIG00005007412)	TTI2 (ENSOKIG00005007481)	mak16 (ENSOKIG00005007495)	ENSOKIG00005007535	MFSD14B (ENSOKIG00005007580)	ENSOKIG00005008397	PIK3R1 (ENSOKIG00005008470)
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000077865	ENSOMYG00000016699	ENSOMYG00000022393	ENSOMYG00000071969	cfap77 (ENSOMYG00000018201)	BARHL1 (ENSOMYG00000018211)	DDX31 (ENSOMYG00000018227)	ak8 (ENSOMYG00000018269)	ENSOMYG00000018398	tsc1a (ENSOMYG00000018376)	ENSOMYG00000064667	grin1b (ENSOMYG00000018442)	ENSOMYG00000018600	ENSOMYG00000018608 #18	ENSOMYG00000018626	DMTN (ENSOMYG00000018648) #22	ENSOMYG00000018672	ENSOMYG00000049342	ENSOMYG00000071267	fhip2b (ENSOMYG00000018772) #23	nudt18 (ENSOMYG00000019714) #24	ENSOMYG00000065798	adam9 (ENSOMYG00000019766)	ENSOMYG00000049070	ENSOMYG00000019977	ENSOMYG00000021558	ENSOMYG00000021885	ENSOMYG00000021976	ENSOMYG00000050013	ENSOMYG00000021999	ENSOMYG00000022029
Salmo	ANCESTRAL SPECIES	30	ENSGT00530000064123.j	ENSGT00940000156744.o.b	ENSGT00940000161616.c.r	ENSGT00940000155670	ENSGT00940000155178.ce	ENSGT00940000155434	ENSGT00390000014476	ENSGT00940000160428.b.a.b	ENSGT00550000075041	ENSGT00940000164784	ENSGT00990000211898	ENSGT00390000014148.f	ENSGT00940000158016.c.a.a	ENSGT00940000159868.b #18	ENSGT00500000044989	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00950000183067.a.b.b.vb.a	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239	ENSGT00950000183125.b.a.a.a.a.b.c	ENSGT01030000234539.b.b.a.i.n	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00950000182925.A.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b
River trout	MODERN SPECIES	21	ENSSTUG00000038683	C5 (ENSSTUG00000038463)	rab14 (ENSSTUG00000038413)	ENSSTUG00000038397	ENSSTUG00000038390	cfap77 (ENSSTUG00000038378)	BARHL1 (ENSSTUG00000038337)	DDX31 (ENSSTUG00000038192)	ak8 (ENSSTUG00000038077)	tsc1a (ENSSTUG00000037885)	grin1b (ENSSTUG00000037756)	kazald3 (ENSSTUG00000037733)	ENSSTUG00000037728 #18	rsph14 (ENSSTUG00000037708)	ENSSTUG00000037704	DMTN (ENSSTUG00000037679) #22	ENSSTUG00000037673	ENSSTUG00000037664	fhip2b (ENSSTUG00000037549) #23	nudt18 (ENSSTUG00000037538) #24	adam9 (ENSSTUG00000035622)	OGDH (ENSSTUG00000033699)	ZMIZ2 (ENSSTUG00000032989)	ENSSTUG00000032967	SLC18A1 (ENSSTUG00000032939)	TTI2 (ENSSTUG00000032934)	mak16 (ENSSTUG00000032823)	ENSSTUG00000032781	MFSD14B (ENSSTUG00000032434)	ENSSTUG00000032322	zgc:101664 (ENSSTUG00000032308)
Atlantic salmon	MODERN SPECIES	18	ENSSSAG00000042569	ENSSSAG00000042668	ENSSSAG00000117330	ENSSSAG00000044457	cssa26h9orf171 (ENSSSAG00000044475)	BARHL1 (ENSSSAG00000097874)	DDX31 (ENSSSAG00000008791)	ak8 (ENSSSAG00000008921)	ENSSSAG00000009492	tsc1 (ENSSSAG00000009422)	grin1b (ENSSSAG00000009741)	ENSSSAG00000107524	dok2 (ENSSSAG00000043339) #18	ENSSSAG00000043348	ENSSSAG00000100833	DMTN (ENSSSAG00000099637) #22	ENSSSAG00000107286	ENSSSAG00000043428	fhip2b (ENSSSAG00000043466) #23	nudt18 (ENSSSAG00000043511) #24	adam9 (ENSSSAG00000043560)	ENSSSAG00000045777	zmiz2 (ENSSSAG00000046445)	ENSSSAG00000049976	ENSSSAG00000088544	tti2 (ENSSSAG00000050113)	ENSSSAG00000050139	spinb (ENSSSAG00000050158)	ENSSSAG00000050340	lrrc2 (ENSSSAG00000054744)	ENSSSAG00000054808
Northern pike	MODERN SPECIES	12	rab14 (ENSELUG00000009832)	ENSELUG00000009796	gsnb (ENSELUG00000028993)	ENSELUG00000009698	cfap77 (ENSELUG00000029762)	BARHL1 (ENSELUG00000009660)	DDX31 (ENSELUG00000001052)	ak8 (ENSELUG00000009619)	tsc1a (ENSELUG00000001247)	CEL (ENSELUG00000009444)	ENSELUG00000016583	grin1b (ENSELUG00000009298)	kazald3 (ENSELUG00000009154)	ENSELUG00000009119 #18	rsph14 (ENSELUG00000009101)	DMTN (ENSELUG00000009063) #22	ENSELUG00000008944	fhip2b (ENSELUG00000008927) #23	nudt18 (ENSELUG00000008900) #24	adam9 (ENSELUG00000000337)	OGDH (ENSELUG00000008746)	ZMIZ2 (ENSELUG00000008651)	ENSELUG00000008409	ppia (ENSELUG00000008535)	SLC18A1 (ENSELUG00000008386)	ENSELUG00000008330	mak16 (ENSELUG00000008291)	spinb (ENSELUG00000008104)	ENSELUG00000008053	ENSELUG00000007986	srp19 (ENSELUG00000032438)
Osteoglossiformes	ANCESTRAL SPECIES	73	ENSGT00940000160296.i #27	ENSGT00940000155860.a	ENSGT00940000160547	ENSGT00940000154314.b	ENSGT00940000155782.e	ENSGT00940000164226.a.a	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b.f	ENSGT00940000160915	ENSGT00940000157038.b	ENSGT00530000064712	ENSGT00940000153710.a	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000167390	ENSGT00950000182850.a.b.b.b.a #22	ENSGT00950000182936.a.b.b #23	ENSGT00390000002931 #24	ENSGT00940000156239.e	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B #32	ENSGT00940000157986 #33	ENSGT00940000154115.d ##34	ENSGT00940000166302	ENSGT00940000156716	ENSGT00390000003458	ENSGT00940000156888.b	ENSGT00940000159875	ENSGT00940000164790.a	ENSGT00940000156902.b
Asian bonytongue	MODERN SPECIES	3	ankrd39 (ENSSFOG00015024327)	kctd9a (ENSSFOG00015012305)	actr1b (ENSSFOG00015012328)	arid5a (ENSSFOG00015012374)	dbnlb (ENSSFOG00015012403)	ube2d4 (ENSSFOG00015012439)	TCF7L1 (ENSSFOG00015012463)	ENSSFOG00015012518	stambpa (ENSSFOG00015012531)	atp6v1b2 (ENSSFOG00015012573)	LZTS1 (ENSSFOG00015012625)	GFRA2 (ENSSFOG00015025997) #17	DOK2 (ENSSFOG00015012656) #18	kazald3 (ENSSFOG00015012677)	fgf17 (ENSSFOG00015028120)	DMTN (ENSSFOG00015012714) #22	ENSSFOG00015012789	fhip2b (ENSSFOG00015012804) #23	nudt18 (ENSSFOG00015024866) #24	adam9 (ENSSFOG00015012841)	atad1a (ENSSFOG00015012892)	ENSSFOG00015012922	piwil2 (ENSSFOG00015012930) #32	slc39a14 (ENSSFOG00015031910) #33	ENSSFOG00015013095	ppp3cca (ENSSFOG00015025342)	adam28 (ENSSFOG00015013111)	tcima (ENSSFOG00015013141)	ZMAT4 (ENSSFOG00015013158)	sfrp1a (ENSSFOG00015013195)	GOLGA7 (ENSSFOG00015027248)
P. kingsleyae	MODERN SPECIES	33	npy8br (ENSPKIG00000024821)	arid5a (ENSPKIG00000024825)	dbnlb (ENSPKIG00000024839)	ube2d4 (ENSPKIG00000024864)	TCF7L1 (ENSPKIG00000024880)	ENSPKIG00000024894	stambpa (ENSPKIG00000024897)	atp6v1b2 (ENSPKIG00000024905)	LZTS1 (ENSPKIG00000024916)	ENSPKIG00000024925	GFRA2 (ENSPKIG00000024932) #17	DOK2 (ENSPKIG00000024935) #18	kazald3 (ENSPKIG00000024942)	fgf17 (ENSPKIG00000024947)	ENSPKIG00000024950	DMTN (ENSPKIG00000024958) #22	ENSPKIG00000024964	fhip2b (ENSPKIG00000024972) #23	nudt18 (ENSPKIG00000024982) #24	adam9 (ENSPKIG00000024992)	atad1a (ENSPKIG00000025007)	piwil2 (ENSPKIG00000025025) #32	ENSPKIG00000025055	slc39a14 (ENSPKIG00000025065) #33	ppp3ccb (ENSPKIG00000025620) ##34	adam28 (ENSPKIG00000000009)	tcima (ENSPKIG00000000036)	ENSPKIG00000000048	sfrp1a (ENSPKIG00000000058)	GOLGA7 (ENSPKIG00000000067)	ENSPKIG00000000078
Osteoglossocephalai	ANCESTRAL SPECIES	64	ENSGT00390000011010.a.a	ENSGT00940000163584.b.b	ENSGT00940000156732.a.b	ENSGT00940000160915	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847	ENSGT00940000153710.a	ENSGT00940000155068.b	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868.b #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000003458	ENSGT00940000156888	ENSGT00940000159875	ENSGT00390000000134.b.a	ENSGT00390000000134.b.b	ENSGT00940000179863	ENSGT00940000155874.b	ENSGT00390000010398.B	ENSGT00940000156991.a.b	ENSGT00940000156808	ENSGT00530000063711.a	ENSGT00940000155874.a	ENSGT00940000157037.b.a	ENSGT00940000160760.a.b
Clupeocephala	ANCESTRAL SPECIES	80	ENSGT00940000156732.a.b	ENSGT00940000160915	ENSGT00940000157038.a.a	ENSGT00530000064712	ENSGT00940000153710.a	ENSGT00940000155068.b	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847	ENSGT00940000154078.a.b	ENSGT00940000156168.B #17	ENSGT00940000159868.b #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22
Otomorpha	ANCESTRAL SPECIES	63	ENSGT00940000154314.a	ENSGT00940000155782	ENSGT00390000009948.d	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a.s	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847	ENSGT00940000153710.a.e	ENSGT00940000155068.b	ENSGT00940000156168.B #17	ENSGT00940000159868.b #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000164419	ENSGT00940000155431.a	ENSGT00950000183012.A.a.c.b	ENSGT00940000166302	ENSGT00940000156716	ENSGT00940000156888.c.b	ENSGT00940000156888.c.a	ENSGT00940000159875	ENSGT00390000000134.b.b	ENSGT00940000179863	ENSGT00530000063711.a	ENSGT00940000155874.b	ENSGT00390000010398.B	ENSGT00940000156991.a.a
Otophysi	ANCESTRAL SPECIES	86														ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000164419	ENSGT00940000155431.a	ENSGT00950000183012.A.a.c.b	ENSGT00940000166302	ENSGT00940000156716	ENSGT00940000156888.c.a	ENSGT00940000159875	ENSGT00390000000134.b.b	ENSGT00530000063711.a	ENSGT00940000155874.b	ENSGT00390000010398.B	ENSGT00940000156991.a.a	ENSGT00940000156991.b	ENSGT00940000156808
Characiphysae	ANCESTRAL SPECIES	141														ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000156716	ENSGT00390000003458	ENSGT00940000156888.d	ENSGT00940000156888.c.a	ENSGT00940000159875	ENSGT00940000155874.a	ENSGT00950000183089.c.b	ENSGT01060000248528.b.l	ENSGT00950000183197.b.a.a	ENSGT00940000165531.b.a	ENSGT00950000182815.a.a.b.h	ENSGT00390000013867.bc.a.a	ENSGT00940000160760.b	ENSGT00730000111181
Channel catfish	MODERN SPECIES	7	isl1b (ENSIPUG00000024427)	GOLPH3 (ENSIPUG00000024434)	GFRA2 (ENSIPUG00000024438) #17	ENSIPUG00000024441	ENSIPUG00000024442	ENSIPUG00000024444	ENSIPUG00000024471 #18	xpo7 (ENSIPUG00000024474) #19	ENSIPUG00000024478	ENSIPUG00000024480	ENSIPUG00000024483	ENSIPUG00000024485	ENSIPUG00000024486	ENSIPUG00000024488	pbdc1 (ENSIPUG00000024491)	dmtn (ENSIPUG00000024493) #22	ppp3ccb (ENSIPUG00000024497) ##34	Sfrp1 (ENSIPUG00000024500)	golga7 (ENSIPUG00000024501)	ENSIPUG00000024504	loxl2 (ENSIPUG00000024508)	ENSIPUG00000024539	ENSIPUG00000024540	ENSIPUG00000024544	ENSIPUG00000024552	ENSIPUG00000024559	ANTXR1 (ENSIPUG00000024566)	AAK1 (ENSIPUG00000024580)	anxa4 (ENSIPUG00000024590)	trim69 (ENSIPUG00000024601)	pcna (ENSIPUG00000024603)
Characiphysae_b	ANCESTRAL SPECIES	138														ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000156716	ENSGT00390000003458	ENSGT00940000156888.d	ENSGT00940000159875	ENSGT00940000155874.a	ENSGT00950000183089.c.b	ENSGT01100000263506.a.d	ENSGT01060000248528.b.l	ENSGT00950000183197.b.a.a	ENSGT00940000165531.b.a	ENSGT00950000182815.a.a.b.h	ENSGT00390000013867.bc.a.a	ENSGT00940000160760.b	ENSGT00730000111181
Characoidei	ANCESTRAL SPECIES	152														ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000156716	ENSGT00390000003458	ENSGT00940000156888.d	ENSGT00940000159875	ENSGT00940000155874.a	ENSGT00950000183089.c.b	ENSGT01060000248528.b.l	ENSGT00950000183197.b.a.a	ENSGT00940000165531.b.a	ENSGT00950000182815.a.a.b.h	ENSGT00390000013867.bc.a.a.b	ENSGT00940000160760.b	ENSGT00730000111181	ENSGT00940000158066.o
Red-bellied piranha	MODERN SPECIES	359													ENSPNAG00000006692 #18	xpo7 (ENSPNAG00000023515) #19	pbdc1 (ENSPNAG00000023528)	dmtn (ENSPNAG00000023556) #22	ppp3ccb (ENSPNAG00000023648) ##34	ENSPNAG00000003777	ENSPNAG00000023708	tcimb (ENSPNAG00000023733)	ENSPNAG00000023764	ENSPNAG00000023775	sfrp1b (ENSPNAG00000003787)	golga7 (ENSPNAG00000023845)	ENSPNAG00000023875	loxl2a (ENSPNAG00000023929)	ENSPNAG00000023952	TACC1 (ENSPNAG00000023999)	DDHD2 (ENSPNAG00000024027)	plpp5 (ENSPNAG00000024042)
Mexicana tetra	MODERN SPECIES	12	hvcn1 (ENSAMXG00000018716)	mtrex (ENSAMXG00000018751)	DHX29 (ENSAMXG00000018788)	ENSAMXG00000018829	ENSAMXG00000038560	GOLPH3 (ENSAMXG00000030266)	isl1b (ENSAMXG00000018850)	ITGA1 (ENSAMXG00000018875)	ENSAMXG00000044112	GFRA2 (ENSAMXG00000042666) #17	ENSAMXG00000034708	ENSAMXG00000033329	ENSAMXG00000032618 #18	xpo7 (ENSAMXG00000020462) #19	pbdc1 (ENSAMXG00000020466)	dmtn (ENSAMXG00000020473) #22	tcimb (ENSAMXG00000025285)	ENSAMXG00000020478	ppp3ccb (ENSAMXG00000020487) ##34	ENSAMXG00000034377	sfrp1b (ENSAMXG00000020492)	golga7 (ENSAMXG00000020496)	ENSAMXG00000030303	ENSAMXG00000033844	ENSAMXG00000031072	loxl2a (ENSAMXG00000020519)	ENSAMXG00000031518	ENSAMXG00000040798	ENSAMXG00000039348	DDHD2 (ENSAMXG00000020540)	NSD3 (ENSAMXG00000020550)
Electric eel	MODERN SPECIES	54	triqk (ENSEEEG00000008872)	cibar1 (ENSEEEG00000008871)	TRIB1 (ENSEEEG00000008870)	lratd2a (ENSEEEG00000008869)	fam91a1 (ENSEEEG00000008865)	klhl38a (ENSEEEG00000008864)	anp32a (ENSEEEG00000008862)	CORO2B (ENSEEEG00000008840)	glceb (ENSEEEG00000008839)	paqr5b (ENSEEEG00000008824)	TLE3 (ENSEEEG00000008577)	GFRA2 (ENSEEEG00000008553) #17	ENSEEEG00000008551 #18	xpo7 (ENSEEEG00000008408) #19	pbdc1 (ENSEEEG00000008400)	dmtn (ENSEEEG00000008346) #22	ppp3ccb (ENSEEEG00000008302) ##34	ENSEEEG00000008284	sfrp1b (ENSEEEG00000008282)	golga7 (ENSEEEG00000008278)
Cyprinoidei	ANCESTRAL SPECIES	48	ENSGT00950000182864.a.b.b.a.a.a.b	ENSGT00390000013415.a.b.jb	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00940000166031	ENSGT00390000008694.b.a	ENSGT00940000165064.b	ENSGT00940000154909.b.a	ENSGT00940000166792	ENSGT00940000165076.b	ENSGT00940000155068.b	ENSGT00630000090221	ENSGT00940000156168.B #17	ENSGT00940000159868.b #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000166302	ENSGT00940000156716	ENSGT00390000003458	ENSGT00940000156888.c.b	ENSGT00940000156888.c.a	ENSGT00940000159875	ENSGT00940000155874.a	ENSGT00950000183089.c.b	ENSGT00950000183197.b.a.a	ENSGT00940000165531.b.a	ENSGT00950000182815.a.a.b.h	ENSGT00940000160760.b	ENSGT00730000111181	ENSGT00940000158066.o
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	233	ENSGT00390000013415.a.b.jb.b	ENSGT01030000234527.A.a.b.a.a.c.a.d	ENSGT00940000166031.b	ENSGT00390000008694.b.a.a.a	ENSGT00940000165064.b.b	ENSGT00940000154909.b.a.d	ENSGT00940000166792.a.b	ENSGT00940000165076.b.e	ENSGT00940000155068.b.kb	ENSGT00630000090221.a.a	ENSGT00630000090221.a.b	ENSGT00940000156168.B.fb.a #17	ENSGT00940000159868.b.v.a #18	ENSGT00940000153139.B.a.a #19	ENSGT00390000016333.a	ENSGT00950000182850.a.b.b.b.b.a #22	ENSGT01010000222287.B.a.a.a.b.f.a	ENSGT00940000154115.d.b ##34	ENSGT00390000003458.n.a	ENSGT00940000156888.c.b.a.b	ENSGT00940000159875.f.b	ENSGT00390000000134.b.b.e	ENSGT00530000063711.a	ENSGT00940000155874.b.a	ENSGT00390000010398.B.b	ENSGT00940000156991.a.a.c	ENSGT00940000156808.u.b	ENSGT00940000159772.i	ENSGT00940000155355.ib.b	ENSGT00950000183167.a.b.b.a.d	ENSGT00940000156818.mb.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	28	bnip3lb (ENSCARG00000016030)	dpysl2b (ENSCARG00000015461)	ENSCARG00000015414	tmem230a (ENSCARG00000015406)	ENSCARG00000015349	LRRTM4 (ENSCARG00000015332)	ENSCARG00000015296	ENSCARG00000015273	atp6v1b2 (ENSCARG00000014917)	ENSCARG00000014864	ENSCARG00000014828	GFRA2 (ENSCARG00000014815) #17	ENSCARG00000014804 #18	xpo7 (ENSCARG00000014751) #19	pbdc1 (ENSCARG00000014717)	dmtn (ENSCARG00000014691) #22	ENSCARG00000014684	ppp3ccb (ENSCARG00000012508) ##34	tcimb (ENSCARG00000012356)	ZMAT4 (ENSCARG00000012332)	sfrp1b (ENSCARG00000012324)	golga7 (ENSCARG00000012304)	ENSCARG00000012268	loxl2a (ENSCARG00000011640)	ENSCARG00000011592	TACC1 (ENSCARG00000011577)	plpp5 (ENSCARG00000011412)	NSD3 (ENSCARG00000010078)	LETM2 (ENSCARG00000009987)	ENSCARG00000009976	prnpb (ENSCARG00000009971)
Goldfish	MODERN SPECIES	1	timm10b (ENSCARG00000017364)	ilk (ENSCARG00000017272)	smpd1 (ENSCARG00000017256)	tpte (ENSCARG00000017086)	fgl1b (ENSCARG00000017043)	ENSCARG00000017036	vps36 (ENSCARG00000016137)	ENSCARG00000016053	stoml3b (ENSCARG00000015912)	ENSCARG00000015904	ENSCARG00000015895	ENSCARG00000015889	ENSCARG00000015885 #18	xpo7 (ENSCARG00000015537) #19	pbdc1 (ENSCARG00000015500)	dmtn (ENSCARG00000015496) #22	ENSCARG00000015492	ppp3ccb (ENSCARG00000015283) ##34	tcimb (ENSCARG00000015259)	ZMAT4 (ENSCARG00000015255)	sfrp1b (ENSCARG00000015247)	golga7 (ENSCARG00000015238)	loxl2a (ENSCARG00000014938)	ENSCARG00000014922	ENSCARG00000014852	plpp5 (ENSCARG00000014834)	NSD3 (ENSCARG00000014720)	LETM2 (ENSCARG00000014686)	ENSCARG00000014670	ENSCARG00000014666	rassf2b (ENSCARG00000014656)
Cyprininae_a	ANCESTRAL SPECIES	51	ENSGT00390000013415.a.b.jb.b	ENSGT01030000234527.A.a.b.a.a.c.a.d	ENSGT00940000166031.b	ENSGT00390000008694.b.a.a.a	ENSGT00940000165064.b.b	ENSGT00940000154909.b.a.d	ENSGT00940000166792.a.b	ENSGT00940000165076.b.e	ENSGT00940000155068.b.kb	ENSGT00630000090221.a.a	ENSGT00630000090221.a.b	ENSGT00940000156168.B.fb.a #17	ENSGT00940000159868.b.v.a #18	ENSGT00940000153139.B.a.a #19	ENSGT00390000016333.a	ENSGT00950000182850.a.b.b.b.b.a #22	ENSGT01010000222287.B.a.a.a.b.f.a	ENSGT00940000154115.d.b ##34	ENSGT00390000003458.n.a	ENSGT00940000156888.c.b.a.b	ENSGT00940000159875.f.b	ENSGT00390000000134.b.b.e	ENSGT00530000063711.a	ENSGT00940000155874.b.a	ENSGT00390000010398.B.a	ENSGT00940000156991.a.a.c	ENSGT00940000156808.u.b	ENSGT00940000159772.i	ENSGT00940000155355.ib.b	ENSGT00950000183167.a.b.b.a.d	ENSGT00940000156818.mb.a
Golden-line barbel	MODERN SPECIES	77														ENSSGRG00000042631 #18	xpo7 (ENSSGRG00000042667) #19	dmtn (ENSSGRG00000044320) #22	ENSSGRG00000044324	ppp3ccb (ENSSGRG00000044443) ##34	tcimb (ENSSGRG00000047442)	ENSSGRG00000047444	sfrp1b (ENSSGRG00000047446)	golga7 (ENSSGRG00000047449)	ENSSGRG00000047457	loxl2a (ENSSGRG00000047459)	ENSSGRG00000047460	ENSSGRG00000047461	DDHD2 (ENSSGRG00000047469)	plpp5 (ENSSGRG00000047553)	ENSSGRG00000047554	LETM2 (ENSSGRG00000047556)	ENSSGRG00000047557
Common carp reference	MODERN SPECIES	32	bnip3lb (ENSCCRG00000068987)	dpysl2b (ENSCCRG00000008364)	ENSCCRG00000016264	tmem230a (ENSCCRG00000053370)	ENSCCRG00000016277	ENSCCRG00000009920	ENSCCRG00000075542	ENSCCRG00000032035	atp6v1b2 (ENSCCRG00000067732)	ENSCCRG00000067956	ENSCCRG00000080394	GFRA2 (ENSCCRG00000021091) #17	ENSCCRG00000073924 #18	xpo7 (ENSCCRG00000009771) #19	pbdc1 (ENSCCRG00000079947)	dmtn (ENSCCRG00000004778) #22	ENSCCRG00000081169	ppp3ccb (ENSCCRG00000014392) ##34	tcimb (ENSCCRG00000053997)	ZMAT4 (ENSCCRG00000061721)	sfrp1b (ENSCCRG00000062281)	golga7 (ENSCCRG00000064659)	ENSCCRG00000046071	loxl2a (ENSCCRG00000020039)	ENSCCRG00000070890	ENSCCRG00000045833	plpp5 (ENSCCRG00000045825)	ENSCCRG00000042742	LETM2 (ENSCCRG00000053301)	ENSCCRG00000042394	sprn2 (ENSCCRG00000063645)
Cyprininae	ANCESTRAL SPECIES	242	ENSGT00950000182864.a.b.b.a.a.a.b.b	ENSGT00390000013415.a.b.jb.a	ENSGT01030000234527.A.a.b.a.a.c.a.c	ENSGT00940000166031.a	ENSGT00390000008694.b.a.a.b	ENSGT00940000165064.b.a	ENSGT00940000154909.b.a.c	ENSGT00940000166792.b	ENSGT00940000165076.b.f	ENSGT00940000155068.b.jb	ENSGT00630000090221.b	ENSGT00940000156168.B.fb.b #17	ENSGT00940000159868.b.v.b #18	ENSGT00940000153139.B.a.b #19	ENSGT00390000016333.b	ENSGT00950000182850.a.b.b.b.b.b #22	ENSGT01010000222287.B.a.a.a.b.f.b	ENSGT00940000154115.d.a ##34	ENSGT00390000003458.n.b	ENSGT00940000156888.c.b.a.a	ENSGT00940000159875.f.a	ENSGT00390000000134.b.b.f	ENSGT00940000155874.b.b	ENSGT00940000156991.a.a.d	ENSGT00940000156808.u.a	ENSGT00940000159772.j	ENSGT00940000155355.ib.a	ENSGT00950000183167.a.b.b.a.c	ENSGT00940000156818.mb.b	ENSGT00390000016468.e	ENSGT00940000158546.`b.a
Goldfish	MODERN SPECIES	863																dmtn (ENSCARG00000030976) #22	ENSCARG00000031016	ppp3ccb (ENSCARG00000031043) ##34
Cyprininae_a	ANCESTRAL SPECIES	198	ENSGT00950000182864.a.b.b.a.a.a.b.b	ENSGT00390000013415.a.b.jb.a	ENSGT01030000234527.A.a.b.a.a.c.a.c	ENSGT00940000166031.a	ENSGT00390000008694.b.a.a.b	ENSGT00940000165064.b.a	ENSGT00940000154909.b.a.c	ENSGT00940000166792.b	ENSGT00940000165076.b.f	ENSGT00940000155068.b.jb	ENSGT00630000090221.b	ENSGT00940000156168.B.fb.b #17	ENSGT00940000159868.b.v.b #18	ENSGT00940000153139.B.a.b #19	ENSGT00390000016333.b	ENSGT00950000182850.a.b.b.b.b.b #22	ENSGT01010000222287.B.a.a.a.b.f.b	ENSGT00940000154115.d.a ##34	ENSGT00390000003458.n.b	ENSGT00940000156888.c.b.a.a	ENSGT00940000159875.f.a	ENSGT00390000000134.b.b.f	ENSGT00940000155874.b.b	ENSGT00940000156991.a.a.d	ENSGT00390000010398.B.b	ENSGT00940000156991.b	ENSGT00940000156808.u.a	ENSGT00940000159772.j	ENSGT00940000155355.ib.a	ENSGT00950000183167.a.b.b.a.c	ENSGT00940000156818.mb.b
Golden-line barbel	MODERN SPECIES	477							LRRTM4 (ENSSGRG00000051850)	ENSSGRG00000051849	ENSSGRG00000051847	ENSSGRG00000051844	ENSSGRG00000051843	GFRA2 (ENSSGRG00000051842) #17	ENSSGRG00000051841 #18	xpo7 (ENSSGRG00000051819) #19	pbdc1 (ENSSGRG00000051814)	dmtn (ENSSGRG00000051812) #22	ENSSGRG00000051798	ppp3ccb (ENSSGRG00000050111) ##34	tcimb (ENSSGRG00000050081)	ZMAT4 (ENSSGRG00000050070)	sfrp1b (ENSSGRG00000050068)	golga7 (ENSSGRG00000050065)	ENSSGRG00000050064	loxl2a (ENSSGRG00000050018)	ENSSGRG00000049993	ENSSGRG00000049992	DDHD2 (ENSSGRG00000049988)	plpp5 (ENSSGRG00000049987)	NSD3 (ENSSGRG00000049797)
Zebrafish	MODERN SPECIES	1	ENSDARG00000027638	tmem230a (ENSDARG00000027687)	ENSDARG00000075864	LRRTM4 (ENSDARG00000080015)	ENSDARG00000092976	vsig8a (ENSDARG00000054050)	atp6v1b2 (ENSDARG00000043465)	ENSDARG00000078394	ENSDARG00000079681	ENSDARG00000076949	ENSDARG00000111734	GFRA2 (ENSDARG00000044015) #17	ENSDARG00000116593 #18	xpo7 (ENSDARG00000005540) #19	pbdc1 (ENSDARG00000057299)	dmtn (ENSDARG00000013110) #22	ENSDARG00000027587	ppp3ccb (ENSDARG00000057456) ##34	tcimb (ENSDARG00000076858)	ZMAT4 (ENSDARG00000061419)	sfrp1b (ENSDARG00000057678)	golga7 (ENSDARG00000057676)	ENSDARG00000099593	loxl2a (ENSDARG00000044010)	ENSDARG00000100139	TACC1 (ENSDARG00000073753)	DDHD2 (ENSDARG00000076765)	plpp5 (ENSDARG00000057672)	NSD3 (ENSDARG00000062765)	LETM2 (ENSDARG00000077515)	ENSDARG00000088831
Clupeiformes	ANCESTRAL SPECIES	40	ENSGT00940000154314.a	ENSGT00940000155782	ENSGT00390000009948.d	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a.s	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847	ENSGT00940000153710.a.e	ENSGT00940000155068.b	ENSGT00940000156168.B #17	ENSGT00940000159868.b #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000166302	ENSGT00940000156716	ENSGT00390000003458	ENSGT00940000156888.c.a	ENSGT00940000155874.a	ENSGT00950000183089.c.b	ENSGT00950000183197.b.a.a	ENSGT00940000165531.b.a	ENSGT00950000182815.a.a.b.h	ENSGT00940000160760.b	ENSGT00730000111181	ENSGT00940000158066.o	ENSGT00940000155596.q	ENSGT00940000159669.b
Atlantic herring	MODERN SPECIES	3	kctd9b (ENSCHAG00000026924)	actr1b (ENSCHAG00000026952)	marchf5l (ENSCHAG00000026958)	npy8ar (ENSCHAG00000026959)	cox5ba (ENSCHAG00000026961)	dbnla (ENSCHAG00000026964)	tcf7l1a (ENSCHAG00000026970)	ENSCHAG00000026989	dusp11 (ENSCHAG00000026994)	stambpa (ENSCHAG00000027000)	atp6v1b2 (ENSCHAG00000027018)	GFRA2 (ENSCHAG00000027049) #17	ENSCHAG00000027051 #18	xpo7 (ENSCHAG00000027068) #19	pbdc1 (ENSCHAG00000027105)	dmtn (ENSCHAG00000027108) #22	ENSCHAG00000027116	ENSCHAG00000027119	ppp3ccb (ENSCHAG00000027218) ##34	ENSCHAG00000027554	tcimb (ENSCHAG00000027558)	ENSCHAG00000027561	sfrp1b (ENSCHAG00000027565)	golga7 (ENSCHAG00000027571)	sdad1 (ENSCHAG00000027579)	SLC10A6 (ENSCHAG00000027595)	ENSCHAG00000027598	klhl8 (ENSCHAG00000027600)	ENSCHAG00000027603	ENSCHAG00000027609	ENSCHAG00000027611
Denticle herring	MODERN SPECIES	13	kctd9b (ENSDCDG00000035235)	actr1b (ENSDCDG00000035240)	marchf5l (ENSDCDG00000035246)	npy8ar (ENSDCDG00000035247)	cox5ba (ENSDCDG00000035248)	dbnla (ENSDCDG00000035249)	tcf7l1a (ENSDCDG00000035251)	ENSDCDG00000035272	dusp11 (ENSDCDG00000035278)	stambpa (ENSDCDG00000035283)	atp6v1b2 (ENSDCDG00000035289)	GFRA2 (ENSDCDG00000035298) #17	DOK2 (ENSDCDG00000035299) #18	xpo7 (ENSDCDG00000035325) #19	pbdc1 (ENSDCDG00000035393)	dmtn (ENSDCDG00000035396) #22	ENSDCDG00000035397	ppp3ccb (ENSDCDG00000035413) ##34	ENSDCDG00000035482	ENSDCDG00000035486	sfrp1b (ENSDCDG00000035490)	ENSDCDG00000035492	golga7 (ENSDCDG00000035497)	sdad1 (ENSDCDG00000035503)	ENSDCDG00000035508	SLC10A6 (ENSDCDG00000035509)	ENSDCDG00000035512	ENSDCDG00000035517	TCF4 (ENSDCDG00000035529)	txnl1 (ENSDCDG00000035540)	NARS1 (ENSDCDG00000035568)
Euteleosteomorpha	ANCESTRAL SPECIES	93	ENSGT00390000009948.d	ENSGT00940000161587	ENSGT00760000119772	ENSGT00940000154314.b	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34
Acanthomorphata	ANCESTRAL SPECIES	15	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00940000156466	ENSGT01030000234908	ENSGT00940000155402.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	12	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00940000156466	ENSGT01030000234908	ENSGT00940000155402.a.b
Percomorphaceae	ANCESTRAL SPECIES	54	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00940000156466	ENSGT01030000234908	ENSGT00940000155402.a.b
Tiger tail seahorse	MODERN SPECIES	392	scarb1 (ENSHCOG00000020498)	SLC4A5 (ENSHCOG00000020573)	SEZ6L (ENSHCOG00000020604)	ENSHCOG00000020627	cryba4 (ENSHCOG00000020635)	cryba4 (ENSHCOG00000020648)	ENSHCOG00000020656	grk3 (ENSHCOG00000020698)	crybb1 (ENSHCOG00000020762)	COX5B (ENSHCOG00000020769)	prpf38a (ENSHCOG00000020781)	ENSHCOG00000020789	ENSHCOG00000020794	xpo7 (ENSHCOG00000020864) #19	pbdc1 (ENSHCOG00000000566)	dmtn (ENSHCOG00000020899) #22	cfap53 (ENSHCOG00000020916)	ENSHCOG00000020946	myo5b (ENSHCOG00000020983)	capslb (ENSHCOG00000004356)	lmbrd2b (ENSHCOG00000004363)	slc25a46 (ENSHCOG00000004375)	slc31a1 (ENSHCOG00000004387)	atp6v1g1 (ENSHCOG00000004402)	fktn (ENSHCOG00000004412)	ENSHCOG00000004453	ENSHCOG00000004499	ugcg (ENSHCOG00000004543)	BMP6 (ENSHCOG00000004564)	zgc:101569 (ENSHCOG00000004571)	pdcd6 (ENSHCOG00000004594)
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00950000183234	ENSGT00940000155402.a.b	ENSGT01030000234908
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00950000183234	ENSGT00940000155402.a.b	ENSGT01030000234908
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00950000183234	ENSGT00940000155402.a.b	ENSGT01030000234908
Pomacentridae	ANCESTRAL SPECIES	84	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00940000159623	ENSGT00940000157979	ENSGT00530000063749.c.b	ENSGT00390000014471
Pomacentridae_A	ANCESTRAL SPECIES	81	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a.i	ENSGT00390000011010.a.a.j	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350.j	ENSGT00940000157350.i	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00940000159623	ENSGT00940000157979	ENSGT00530000063749.c.b
Amphiprion	DUPLICATION
Amphiprion	ANCESTRAL SPECIES	264							ENSGT00390000011010.a.a.i	ENSGT00940000156732.a.a.g.b	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333.c	ENSGT00950000182850.a.b.b.b.b.c #22	ENSGT00940000154115.d ##34
Clown anemonefish	DUPLICATION
Clown anemonefish	MODERN SPECIES	3115																dmtn (ENSAOCG00000014122) #22
Clown anemonefish	MODERN SPECIES	2262																dmtn (ENSAOCG00000018523) #22
Orange clownfish	MODERN SPECIES	7	COX5B (ENSAPEG00000022267)	ENSAPEG00000022282	tcf7l1a (ENSAPEG00000022302)	ENSAPEG00000022394	dusp11 (ENSAPEG00000022407)	ATP6V1B2 (ENSAPEG00000022415)	COX5B (ENSAPEG00000022441)	ENSAPEG00000022460	tcf7l1a (ENSAPEG00000022498)	ENSAPEG00000022526	dusp11 (ENSAPEG00000022535)	ENSAPEG00000022556	GFRA2 (ENSAPEG00000022593) #17	xpo7 (ENSAPEG00000022620) #19	pbdc1 (ENSAPEG00000022681)	dmtn (ENSAPEG00000022699) #22	ppp3ccb (ENSAPEG00000022727) ##34	dmtn (ENSAPEG00000022751) #22	ENSAPEG00000022758	nkx6.1 (ENSAPEG00000022770)	ENSAPEG00000022783	ENSAPEG00000022795	gpat3 (ENSAPEG00000022834)	abraxas1 (ENSAPEG00000022912)	ENSAPEG00000022927	mrps18c (ENSAPEG00000022956)	HELQ (ENSAPEG00000022964)	hpse (ENSAPEG00000023005)	gpat3 (ENSAPEG00000023036)	abraxas1 (ENSAPEG00000023045)	ENSAPEG00000023053
Amphiprion	ANCESTRAL SPECIES																	ENSGT00950000182850.a.b.b.b.b.d #22
Orange clownfish	MODERN SPECIES	7	tcf7l1a (ENSAPEG00000022302)	ENSAPEG00000022394	dusp11 (ENSAPEG00000022407)	ATP6V1B2 (ENSAPEG00000022415)	COX5B (ENSAPEG00000022441)	ENSAPEG00000022460	tcf7l1a (ENSAPEG00000022498)	ENSAPEG00000022526	dusp11 (ENSAPEG00000022535)	ENSAPEG00000022556	GFRA2 (ENSAPEG00000022593) #17	xpo7 (ENSAPEG00000022620) #19	pbdc1 (ENSAPEG00000022681)	dmtn (ENSAPEG00000022699) #22	ppp3ccb (ENSAPEG00000022727) ##34	dmtn (ENSAPEG00000022751) #22	ENSAPEG00000022758	nkx6.1 (ENSAPEG00000022770)	ENSAPEG00000022783	ENSAPEG00000022795	gpat3 (ENSAPEG00000022834)	abraxas1 (ENSAPEG00000022912)	ENSAPEG00000022927	mrps18c (ENSAPEG00000022956)	HELQ (ENSAPEG00000022964)	hpse (ENSAPEG00000023005)	gpat3 (ENSAPEG00000023036)	abraxas1 (ENSAPEG00000023045)	ENSAPEG00000023053	mrps18c (ENSAPEG00000023068)	HELQ (ENSAPEG00000023153)
Spiny chromis	MODERN SPECIES	2824															pbdc1 (ENSAPOG00000008058)	dmtn (ENSAPOG00000008027) #22
Bicolor damselfish	MODERN SPECIES	2764																dmtn (ENSSPAG00000020668) #22
Cichlidae	ANCESTRAL SPECIES	75													ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00500000044904.a.b.e.a.k.a.a.b.b.a	ENSGT00500000044904.a.b.e.a.k.b.b.a.a.a.b	ENSGT00950000183234	ENSGT00940000155402.a.b
Midas cichlid	MODERN SPECIES	573															pbdc1 (ENSACIG00000020377)	dmtn (ENSACIG00000020357) #22	ppp3ccb (ENSACIG00000020334) ##34	hpse (ENSACIG00000020277)	mrps18c (ENSACIG00000020253)	HELQ (ENSACIG00000020216)	abraxas1 (ENSACIG00000020189)	gpat3 (ENSACIG00000020168)	nkx6.1 (ENSACIG00000020153)	rpl17 (ENSACIG00000020062)	MFHAS1 (ENSACIG00000020042)	ENSACIG00000020036	ENSACIG00000020015
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a.e	ENSGT00390000011010.a.a.f	ENSGT00940000156732.a.a	ENSGT00940000155847.c	ENSGT00940000164699.q	ENSGT00940000164699.r	ENSGT00940000157038.a.b.v	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00500000044904.a.b.e.a.k.a.a.a.b	ENSGT00500000044904.a.b.e.a.k.b.b.a.a.a.b	ENSGT00950000183234	ENSGT00940000155402.a.b
Nile tilapia	MODERN SPECIES	19	actr1b (ENSONIG00000012600)	npy8ar (ENSONIG00000012598)	COX5B (ENSONIG00000012596)	COX5B (ENSONIG00000012594)	dbnla (ENSONIG00000012589)	dusp11 (ENSONIG00000032244)	ENSONIG00000012587	ENSONIG00000012584	TCF7L1 (ENSONIG00000012578)	ATP6V1B2 (ENSONIG00000012574)	GFRA2 (ENSONIG00000012573) #17	ENSONIG00000003620	ENSONIG00000019086	xpo7 (ENSONIG00000012566) #19	pbdc1 (ENSONIG00000012558)	dmtn (ENSONIG00000012554) #22	ppp3ccb (ENSONIG00000012541) ##34	hpse (ENSONIG00000012533)	mrps18c (ENSONIG00000012527)	HELQ (ENSONIG00000012532)	gpat3 (ENSONIG00000012514)	nkx6-1 (ENSONIG00000040109)	rpl17 (ENSONIG00000012509)	MFHAS1 (ENSONIG00000012507)	ENSONIG00000036777	ENSONIG00000030099	ENSONIG00000027867	ENSONIG00000035780	ENSONIG00000038656	ENSONIG00000012500	ENSONIG00000041068
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a.e	ENSGT00390000011010.a.a.f	ENSGT00940000156732.a.a	ENSGT00940000155847.c	ENSGT00940000164699.q.b	ENSGT00940000164699.r	ENSGT00940000157038.a.b.v	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00500000044904.a.b.e.a.k.a.a.a.b	ENSGT00500000044904.a.b.e.a.k.b.b.a.a.a.b	ENSGT00950000183234	ENSGT00940000155402.a.b
Lyretail cichlid	MODERN SPECIES	293	marchf5l (ENSNBRG00000006843)	actr1b (ENSNBRG00000006777)	npy8ar (ENSNBRG00000006748)	ENSNBRG00000006713	COX5B (ENSNBRG00000006699)	ENSNBRG00000006679	ENSNBRG00000006667	ENSNBRG00000006647	TCF7L1 (ENSNBRG00000006638)	ATP6V1B2 (ENSNBRG00000006606)	ENSNBRG00000006571	GFRA2 (ENSNBRG00000006485) #17	ENSNBRG00000006452	xpo7 (ENSNBRG00000006360) #19	pbdc1 (ENSNBRG00000006350)	dmtn (ENSNBRG00000006310) #22	ppp3ccb (ENSNBRG00000006251) ##34	hpse (ENSNBRG00000006197)	mrps18c (ENSNBRG00000006182)	abraxas1 (ENSNBRG00000006147)	gpat3 (ENSNBRG00000006106)	nkx6.1 (ENSNBRG00000006083)	rpl17 (ENSNBRG00000006026)	MFHAS1 (ENSNBRG00000006014)	ENSNBRG00000006002	ENSNBRG00000005974	ENSNBRG00000005956	ENSNBRG00000005930	ENSNBRG00000005917	ppp1r3b (ENSNBRG00000005909)	lmbrd2b (ENSNBRG00000005856)
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a.e	ENSGT00390000011010.a.a.f	ENSGT00940000156732.a.a	ENSGT00940000155847.c	ENSGT00940000164699.q.b	ENSGT00940000164699.r	ENSGT00940000157038.a.b.v	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.a.b	ENSGT00940000163299.B.b.b.h.c.b.t.b.a	ENSGT00940000155987.b	ENSGT00940000163299.B.b.b.h.c.b.s.a.b	ENSGT00500000044904.a.b.e.a.k.a.a.a.a.a	ENSGT00940000159475.c
Burton s mouthbrooder	MODERN SPECIES	706														xpo7 (ENSHBUG00000001912) #19	pbdc1 (ENSHBUG00000001927)	dmtn (ENSHBUG00000001936) #22	ppp3ccb (ENSHBUG00000001946) ##34	hpse (ENSHBUG00000001958)	HELQ (ENSHBUG00000001997)	mrps18c (ENSHBUG00000002008)	abraxas1 (ENSHBUG00000002018)	gpat3 (ENSHBUG00000002032)	nkx6.1 (ENSHBUG00000002037)	ENSHBUG00000002042	rpl17 (ENSHBUG00000002066)	MFHAS1 (ENSHBUG00000002081)	ENSHBUG00000002092	ENSHBUG00000002104
Haplochromini_A	ANCESTRAL SPECIES	1	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a.e	ENSGT00390000011010.a.a.f	ENSGT00940000156732.a.a	ENSGT00940000155847.c	ENSGT00940000164699.q.b	ENSGT00940000164699.r	ENSGT00940000157038.a.b.v	ENSGT00940000155068.a.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.a.b.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.a.b.b	ENSGT00940000163299.B.b.b.h.c.b.t.b.a	ENSGT00940000155987.b	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00500000044904.a.b.e.a.k.a.a.a.b
P. nyererei	MODERN SPECIES	516																dmtn (ENSPNYG00000010425) #22	ppp3ccb (ENSPNYG00000010466) ##34	hpse (ENSPNYG00000010531)	HELQ (ENSPNYG00000010575)	mrps18c (ENSPNYG00000010654)	abraxas1 (ENSPNYG00000010639)	gpat3 (ENSPNYG00000010667)	nkx6.1 (ENSPNYG00000010705)	rpl17 (ENSPNYG00000010723)	MFHAS1 (ENSPNYG00000010802)	ENSPNYG00000010827	ENSPNYG00000010872	ppp1r3b (ENSPNYG00000010876)	lmbrd2b (ENSPNYG00000010898)	ENSPNYG00000010929	ENSPNYG00000010958
Haplochromini_B	ANCESTRAL SPECIES	4										ENSGT00940000157038.a.b.v	ENSGT00940000155068.a.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.a.b.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.b.a.a.a.b.b	ENSGT00940000163299.B.b.b.h.c.b.t.b.a	ENSGT00940000155987.b.h.a	ENSGT01000000214408.a.b.a.a.a.c.a.b.e.a.a.b	ENSGT00940000163299.B.b.b.h.c.b.t.a	ENSGT00940000163299.B.b.b.h.c.b.s.a.b
Zebra mbuna	MODERN SPECIES	1110	rnf224 (ENSMZEG00005023193)	ENSMZEG00005023195	FER (ENSMZEG00005023198)	cdc26 (ENSMZEG00005023203)	prpf4 (ENSMZEG00005023205)	gal (ENSMZEG00005023208)	ENSMZEG00005023209	CADPS2 (ENSMZEG00005023215)	fezf1 (ENSMZEG00005023230)	kcne4 (ENSMZEG00005023231)	ATP6V1B2 (ENSMZEG00005023232)	ENSMZEG00005023235	GFRA2 (ENSMZEG00005023241) #17	xpo7 (ENSMZEG00005023246) #19	pbdc1 (ENSMZEG00005023249)	dmtn (ENSMZEG00005023252) #22	ppp3ccb (ENSMZEG00005023257) ##34	hpse (ENSMZEG00005023262)	HELQ (ENSMZEG00005023270)	mrps18c (ENSMZEG00005023278)	gpat3 (ENSMZEG00005023281)	nkx6.1 (ENSMZEG00005023285)	rpl17 (ENSMZEG00005023287)	MFHAS1 (ENSMZEG00005023295)	ENSMZEG00005023296	ENSMZEG00005023298	ENSMZEG00005023303	ENSMZEG00005023305	ENSMZEG00005023307	ENSMZEG00005023309	ppp1r3b (ENSMZEG00005023310)
Eastern happy	MODERN SPECIES	19	CPA1 (ENSACLG00000012457)	CPA1 (ENSACLG00000012419)	cep41 (ENSACLG00000012383)	poc1b (ENSACLG00000012360)	dusp6 (ENSACLG00000012334)	ENSACLG00000012298	ENSACLG00000012273	TCF7L1 (ENSACLG00000011476)	ATP6V1B2 (ENSACLG00000011445)	ENSACLG00000011433	ENSACLG00000011142	ENSACLG00000011135	GFRA2 (ENSACLG00000010980) #17	xpo7 (ENSACLG00000010791) #19	pbdc1 (ENSACLG00000010774)	dmtn (ENSACLG00000010704) #22	ppp3ccb (ENSACLG00000010653) ##34	hpse (ENSACLG00000010619)	HELQ (ENSACLG00000010558)	mrps18c (ENSACLG00000010521)	abraxas1 (ENSACLG00000010501)	gpat3 (ENSACLG00000010444)	ENSACLG00000009622	nkx6.1 (ENSACLG00000009617)	rpl17 (ENSACLG00000009583)	MFHAS1 (ENSACLG00000009577)	ENSACLG00000009571	ENSACLG00000009558	ENSACLG00000009555	ENSACLG00000009552	ENSACLG00000009348
Atherinomorphae	ANCESTRAL SPECIES	17	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00950000183234	ENSGT00940000155402.a.b	ENSGT01030000234908	ENSGT00940000156466
Oryzias	ANCESTRAL SPECIES	9	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00390000018651.a	ENSGT00940000159475.c	ENSGT01090000260978	ENSGT00940000155402.a.b	ENSGT01030000234908	ENSGT00940000156466
Oryzias_a	ANCESTRAL SPECIES	12	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00990000208027	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00390000018651.a	ENSGT00940000159475.c	ENSGT01090000260978	ENSGT00940000155402.a.b	ENSGT01030000234908	ENSGT00940000156466
Japanese Medaka HdrR	MODERN SPECIES	3	marchf5l (ENSORLG00000000280)	actr1b (ENSORLG00000025734)	npy8ar (ENSORLG00000000273)	ENSORLG00000024890	COX5B (ENSORLG00000019521)	ENSORLG00000022498	ENSORLG00000026012	tcf7l1a (ENSORLG00000022421)	ENSORLG00000023584	dusp11 (ENSORLG00000023976)	ATP6V1B2 (ENSORLG00000029718)	ENSORLG00000022641	GFRA2 (ENSORLG00000029388) #17	xpo7 (ENSORLG00000025259) #19	pbdc1 (ENSORLG00000019795)	dmtn (ENSORLG00000030150) #22	ppp3ccb (ENSORLG00000026198) ##34	hpse (ENSORLG00000020343)	HELQ (ENSORLG00000022717)	ENSORLG00000027371	abraxas1 (ENSORLG00000022037)	gpat3 (ENSORLG00000023001)	nkx6.1 (ENSORLG00000019018)	ENSORLG00000028484	rpl17 (ENSORLG00000028403)	MFHAS1 (ENSORLG00000022182)	lmbrd2b (ENSORLG00000022269)	ppp1r3b (ENSORLG00000020468)	ENSORLG00000028036	myo5b (ENSORLG00000028096)	myo5b (ENSORLG00000018326)
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT00940000154704.c.c	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00390000018651.a	ENSGT00940000159475.c	ENSGT01090000260978	ENSGT00940000155402.a.b	ENSGT01030000234908	ENSGT00940000156466
Indian medaka	MODERN SPECIES	30	actr1b (ENSOMEG00000004609)	npy8ar (ENSOMEG00000004622)	ENSOMEG00000004632	COX5B (ENSOMEG00000004641)	ENSOMEG00000004663	tcf7l1a (ENSOMEG00000004675)	ENSOMEG00000004697	dusp11 (ENSOMEG00000004705)	ENSOMEG00000004713	ATP6V1B2 (ENSOMEG00000004736)	ENSOMEG00000000874	GFRA2 (ENSOMEG00000004769) #17	ENSOMEG00000004783	xpo7 (ENSOMEG00000004832) #19	pbdc1 (ENSOMEG00000004797)	dmtn (ENSOMEG00000004866) #22	ppp3ccb (ENSOMEG00000004900) ##34	hpse (ENSOMEG00000004923)	HELQ (ENSOMEG00000004983)	mrps18c (ENSOMEG00000005009)	abraxas1 (ENSOMEG00000005029)	gpat3 (ENSOMEG00000005047)	nkx6.1 (ENSOMEG00000005058)	rpl17 (ENSOMEG00000005081)	MFHAS1 (ENSOMEG00000005094)	lmbrd2b (ENSOMEG00000005113)	ppp1r3b (ENSOMEG00000005119)	ENSOMEG00000005130	myo5b (ENSOMEG00000005222)	ENSOMEG00000005239	capslb (ENSOMEG00000005269)
Javanese ricefish	MODERN SPECIES	3	stc1l (ENSOJAG00000007558)	ENSOJAG00000007653	kctd9b (ENSOJAG00000012023)	marchf5l (ENSOJAG00000012113)	actr1b (ENSOJAG00000012118)	npy8ar (ENSOJAG00000012195)	COX5B (ENSOJAG00000012217)	ENSOJAG00000012228	ENSOJAG00000012239	tcf7l1a (ENSOJAG00000012257)	ENSOJAG00000012269	dusp11 (ENSOJAG00000012276)	GFRA2 (ENSOJAG00000012287) #17	ENSOJAG00000012326	pbdc1 (ENSOJAG00000012370)	dmtn (ENSOJAG00000012376) #22	ppp3ccb (ENSOJAG00000012553) ##34	hpse (ENSOJAG00000014729)	ENSOJAG00000014738	mrps18c (ENSOJAG00000015075)	abraxas1 (ENSOJAG00000015086)	nkx6.1 (ENSOJAG00000015395)	rpl17 (ENSOJAG00000015430)	MFHAS1 (ENSOJAG00000015475)	ppp1r3b (ENSOJAG00000015591)	ENSOJAG00000015608	myo5b (ENSOJAG00000015623)	ENSOJAG00000015658	capslb (ENSOJAG00000015672)	slc31a1 (ENSOJAG00000015685)	atp6v1g1 (ENSOJAG00000015700)
Cyprinodontiformes	ANCESTRAL SPECIES	16	ENSGT00940000157326	ENSGT00940000158928	ENSGT00950000183010.a.a.b	ENSGT00940000160897	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000156732.a.a	ENSGT00390000011010.a.a	ENSGT00940000164226.a.b	ENSGT00940000155782	ENSGT00390000009948.d	ENSGT00940000154314.a	ENSGT00940000155860.b	ENSGT00390000005989.b.b	ENSGT00940000154704.c.c	ENSGT00410000025802	ENSGT00940000155657	ENSGT00940000161915.b	ENSGT00940000154856.B.c
Cyprinodontoidei	ANCESTRAL SPECIES	36	ENSGT00940000157326	ENSGT00940000158928	ENSGT00950000183010.a.a.b	ENSGT00940000160897	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000156732.a.a	ENSGT00390000011010.a.a	ENSGT00940000164226.a.b	ENSGT00940000155782	ENSGT00390000009948.d	ENSGT00940000155860.b	ENSGT00390000005989.b.b	ENSGT00410000025802	ENSGT00940000157873	ENSGT00530000064469	ENSGT00940000156510.h	ENSGT00390000004945	ENSGT00940000156369
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00940000157326	ENSGT00940000158928	ENSGT00950000183010.a.a.b	ENSGT00940000160897	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000156732.a.a	ENSGT00390000011010.a.a	ENSGT00940000164226.a.b	ENSGT00940000155782	ENSGT00390000009948.d.g	ENSGT00940000155860.b	ENSGT00390000005989.b.b	ENSGT00410000025802	ENSGT00940000157873	ENSGT00530000064469	ENSGT00940000156510.h	ENSGT00390000004945	ENSGT00940000156369
Poecilia	ANCESTRAL SPECIES	12	ENSGT00940000157326	ENSGT00940000158928	ENSGT00950000183010.a.a.b	ENSGT00940000160897	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000156732.a.a	ENSGT00390000011010.a.a.n	ENSGT00390000011010.a.a.m	ENSGT00940000164226.a.b	ENSGT00940000155782	ENSGT00390000009948.d.g	ENSGT00940000155860.b	ENSGT00390000005989.b.b	ENSGT00410000025802	ENSGT00940000157873	ENSGT00530000064469	ENSGT00940000156510.h	ENSGT00390000004945
NAME_6	ANCESTRAL SPECIES	111	ENSGT00940000157326	ENSGT00940000158928	ENSGT00950000183010.a.a.b	ENSGT00940000160897	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000156732.a.a	ENSGT00390000011010.a.a.n	ENSGT00390000011010.a.a.m	ENSGT00940000164226.a.b	ENSGT00940000155782	ENSGT00390000009948.d.g	ENSGT00940000155860.b	ENSGT00390000005989.b.b	ENSGT00410000025802	ENSGT00940000157873	ENSGT00530000064469	ENSGT00940000156510.h	ENSGT00390000004945
Amazon molly	MODERN SPECIES	557								PAM (ENSPFOG00000021753)	ENSPFOG00000023791	ATP6V1B2 (ENSPFOG00000006973)	GFRA2 (ENSPFOG00000006931) #17	ENSPFOG00000021790	ENSPFOG00000006913	xpo7 (ENSPFOG00000006620) #19	pbdc1 (ENSPFOG00000006527)	dmtn (ENSPFOG00000006452) #22	ppp3ccb (ENSPFOG00000006179) ##34	hpse (ENSPFOG00000005950)	ENSPFOG00000005850	COX5B (ENSPFOG00000005827)	COX5B (ENSPFOG00000005799)	npy8ar (ENSPFOG00000005748)	actr1b (ENSPFOG00000005649)	marchf5l (ENSPFOG00000005642)	FGFR1 (ENSPFOG00000005362)	stc1l (ENSPFOG00000005286)	ENSPFOG00000005275	reep5 (ENSPFOG00000005207)	ENSPFOG00000005127	TSHR (ENSPFOG00000004844)	pomk (ENSPFOG00000004795)
Sailfin molly	MODERN SPECIES	218														xpo7 (ENSPLAG00000012688) #19	pbdc1 (ENSPLAG00000012728)	dmtn (ENSPLAG00000012761) #22	ppp3ccb (ENSPLAG00000012804) ##34	hpse (ENSPLAG00000012813)	dbnla (ENSPLAG00000012851)	COX5B (ENSPLAG00000012868)	npy8ar (ENSPLAG00000012889)	actr1b (ENSPLAG00000012936)	marchf5l (ENSPLAG00000012957)	ENSPLAG00000012981	FGFR1 (ENSPLAG00000013010)	stc1l (ENSPLAG00000013025)	ENSPLAG00000013032	reep5 (ENSPLAG00000000824)	ENSPLAG00000013068	ENSPLAG00000013114	pomk (ENSPLAG00000013128)
Guppy	MODERN SPECIES	442	MFHAS1 (ENSPREG00000012401)	rpl17 (ENSPREG00000012415)	nkx6.1 (ENSPREG00000012467)	ENSPREG00000012492	gpat3 (ENSPREG00000012518)	abraxas1 (ENSPREG00000012574)	mrps18c (ENSPREG00000012593)	HELQ (ENSPREG00000012605)	ENSPREG00000012639	ENSPREG00000012655	dusp11 (ENSPREG00000012668)	ATP6V1B2 (ENSPREG00000012684)	GFRA2 (ENSPREG00000012717) #17	xpo7 (ENSPREG00000012766) #19	pbdc1 (ENSPREG00000012829)	dmtn (ENSPREG00000012844) #22	ppp3ccb (ENSPREG00000012883) ##34	hpse (ENSPREG00000012925)	ENSPREG00000012952	COX5B (ENSPREG00000012969)	COX5B (ENSPREG00000012980)	npy8ar (ENSPREG00000012998)	actr1b (ENSPREG00000013010)	marchf5l (ENSPREG00000013049)	ENSPREG00000013077	FGFR1 (ENSPREG00000013099)	stc1l (ENSPREG00000013159)	ENSPREG00000013177	reep5 (ENSPREG00000013185)	ENSPREG00000013208	ENSPREG00000013234
Platyfish	MODERN SPECIES	22	ENSXMAG00000026289	MFHAS1 (ENSXMAG00000000212)	rpl17 (ENSXMAG00000012219)	nkx6.1 (ENSXMAG00000020939)	gpat3 (ENSXMAG00000012498)	mrps18c (ENSXMAG00000012555)	ENSXMAG00000012563	tcf7l1a (ENSXMAG00000012205)	ENSXMAG00000028643	dusp11 (ENSXMAG00000023145)	ATP6V1B2 (ENSXMAG00000012143)	GFRA2 (ENSXMAG00000023717) #17	ENSXMAG00000010553	xpo7 (ENSXMAG00000000433) #19	pbdc1 (ENSXMAG00000025033)	dmtn (ENSXMAG00000029718) #22	ppp3ccb (ENSXMAG00000000406) ##34	hpse (ENSXMAG00000000390)	dbnla (ENSXMAG00000000382)	ENSXMAG00000000374	npy8ar (ENSXMAG00000000370)	actr1b (ENSXMAG00000000355)	marchf5l (ENSXMAG00000000352)	ENSXMAG00000022806	FGFR1 (ENSXMAG00000016402)	stc1l (ENSXMAG00000016392)	ENSXMAG00000016389	reep5 (ENSXMAG00000016377)	ENSXMAG00000025347	ENSXMAG00000016373	TSHR (ENSXMAG00000016333)
NAME_4	ANCESTRAL SPECIES	382														ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000156732.a.a	ENSGT00390000011010.a.a.o
Mummichog	MODERN SPECIES	2267	kmt5aa (ENSFHEG00000007384)	RILPL1 (ENSFHEG00000007463)	ENSFHEG00000007491	fbxo18 (ENSFHEG00000007533)	HIP1R (ENSFHEG00000007666)	ENSFHEG00000007683	denr (ENSFHEG00000007729)	ENSFHEG00000007739	ENSFHEG00000007767	ENSFHEG00000007782	bcl7a (ENSFHEG00000007792)	eif2b1 (ENSFHEG00000007837)	ddx55 (ENSFHEG00000007912)	xpo7 (ENSFHEG00000007999) #19	pbdc1 (ENSFHEG00000008012)	dmtn (ENSFHEG00000008041) #22	ppp3ccb (ENSFHEG00000008093) ##34	hpse (ENSFHEG00000008117)	ENSFHEG00000008136	COX5B (ENSFHEG00000000204)
Aplocheiloidei	ANCESTRAL SPECIES	62	ENSGT00940000157326	ENSGT00940000158928	ENSGT00950000183010.a.a.b	ENSGT00940000160897	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000156732.a.a	ENSGT00390000011010.a.a
Turquoise killifish	MODERN SPECIES	1623	gtf2f2b (ENSNFUG00015004982)	ENSNFUG00015004998	ENSNFUG00015005002	ENSNFUG00015005006	COL5A2 (ENSNFUG00015005052)	GULP1 (ENSNFUG00015005561)	asmt (ENSNFUG00015005631)	ENSNFUG00015005649	DHRSX (ENSNFUG00015005653)	ENSNFUG00015005659	ENSNFUG00015005665	ENSNFUG00015005686 #17	xpo7 (ENSNFUG00015005734) #19	ENSNFUG00015005805	PBDC1 (ENSNFUG00015005809)	dmtn (ENSNFUG00015005817) #22	ppp3ccb (ENSNFUG00015005852) ##34	hpse (ENSNFUG00015006098)	ENSNFUG00015006108	DBNL (ENSNFUG00015006118)	Nfu_g_1_014200 (ENSNFUG00015006129)	slc12a2 (ENSNFUG00015006560)	slc27a6 (ENSNFUG00015012283)	lmnb1 (ENSNFUG00015012943)	prrc1 (ENSNFUG00015013046)	megf10 (ENSNFUG00015013109)	ENSNFUG00015013896	REEP5 (ENSNFUG00015013902)	SPTLC1 (ENSNFUG00015013928)	FBXW2 (ENSNFUG00015013997)	prkag3b (ENSNFUG00015014015)
Mangrove rivulus	MODERN SPECIES	101	MFHAS1 (ENSKMAG00000016229)	rpl17 (ENSKMAG00000016257)	nkx6.1 (ENSKMAG00000016346)	gpat3 (ENSKMAG00000016366)	ENSKMAG00000016409	abraxas1 (ENSKMAG00000016436)	mrps18c (ENSKMAG00000016467)	HELQ (ENSKMAG00000016486)	tcf7l1a (ENSKMAG00000016503)	ENSKMAG00000016521	dusp11 (ENSKMAG00000016529)	ATP6V1B2 (ENSKMAG00000016556)	GFRA2 (ENSKMAG00000016668) #17	xpo7 (ENSKMAG00000016721) #19	pbdc1 (ENSKMAG00000016856)	dmtn (ENSKMAG00000016868) #22	ppp3ccb (ENSKMAG00000016898) ##34	hpse (ENSKMAG00000016940)	dbnla (ENSKMAG00000016958)	COX5B (ENSKMAG00000016989)
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00950000183234	ENSGT00940000155402.a.b	ENSGT01030000234908
Eupercaria	ANCESTRAL SPECIES	13	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00500000044904.a.b.e.b.a.a	ENSGT00950000183234	ENSGT00940000155402.a.b
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00500000044904.a.b.e.b.a.a.d	ENSGT00950000183234	ENSGT00940000155402.a.b
Ballan wrasse	MODERN SPECIES	94														xpo7 (ENSLBEG00000018784) #19	pbdc1 (ENSLBEG00000018849)	dmtn (ENSLBEG00000018887) #22	ppp3ccb (ENSLBEG00000018935) ##34	hpse (ENSLBEG00000018994)	HELQ (ENSLBEG00000019017)	abraxas1 (ENSLBEG00000019087)	mrps18c (ENSLBEG00000019174)	gpat3 (ENSLBEG00000019197)	nkx6.1 (ENSLBEG00000019245)	rpl17 (ENSLBEG00000019276)	MFHAS1 (ENSLBEG00000019368)	ugcg (ENSLBEG00000019387)	PTBP3 (ENSLBEG00000019422)	hsdl2 (ENSLBEG00000019478)	ENSLBEG00000019533	capslb (ENSLBEG00000019559)	ENSLBEG00000019590
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00500000044904.a.b.e.b.a.b	ENSGT00950000183234	ENSGT00940000155402.a.b
Perciformes	ANCESTRAL SPECIES	16	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000161587	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000165965	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00500000044904.a.b.e.b.a.b	ENSGT00950000183234	ENSGT00940000155402.a.b
Cottioidei	ANCESTRAL SPECIES	77							ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00950000183234	ENSGT00940000155402.a.b	ENSGT01030000234908	ENSGT00940000156466
Lumpfish	MODERN SPECIES	3				marchf5l (ENSCLMG00005005968)	ACTR1B (ENSCLMG00005005975)	npy8ar (ENSCLMG00005006266)	COX5B (ENSCLMG00005006269)	dbnla (ENSCLMG00005006270)	tcf7l1a (ENSCLMG00005006271)	ENSCLMG00005006275	dusp11 (ENSCLMG00005006277)	ENSCLMG00005006281 #17	ENSCLMG00005006283 #17	xpo7 (ENSCLMG00005006304) #19	pbdc1 (ENSCLMG00005006578)	dmtn (ENSCLMG00005006579) #22	PPP3CB (ENSCLMG00005006624) ##34	hpse (ENSCLMG00005010845)	HELQ (ENSCLMG00005010853)	mrps18c (ENSCLMG00005010864)	ENSCLMG00005010865	ENSCLMG00005010866	nkx6.1 (ENSCLMG00005010867)	rpl17 (ENSCLMG00005010868)	MFHAS1 (ENSCLMG00005010874)	lmbrd2b (ENSCLMG00005010878)	ENSCLMG00005010943	ENSCLMG00005010944	myo5b (ENSCLMG00005010955)	ENSCLMG00005011660	capslb (ENSCLMG00005011661)
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000161587	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a
Channel bull blenny	MODERN SPECIES	237															pbdc1 (ENSCGOG00000007751)	dmtn (ENSCGOG00000007759) #22
Pike perch	MODERN SPECIES	74	ENSSLUG00000010801	ENSSLUG00000010794	ENSSLUG00000010787	ENSSLUG00000010781	ENSSLUG00000010776	ENSSLUG00000010774	dusp11 (ENSSLUG00000010771)	ATP6V1B2 (ENSSLUG00000010743)	GFRA2 (ENSSLUG00000010730) #17	ENSSLUG00000010726	ENSSLUG00000010724	xpo7 (ENSSLUG00000007107) #19	ENSSLUG00000006823	ENSSLUG00000006821	pbdc1 (ENSSLUG00000006808)	dmtn (ENSSLUG00000006796) #22	ppp3ccb (ENSSLUG00000002445) ##34	MYL5 (ENSSLUG00000002188)	hpse (ENSSLUG00000002177)	ENSSLUG00000002174	ENSSLUG00000002171	HELQ (ENSSLUG00000001903)	mrps18c (ENSSLUG00000001799)	abraxas1 (ENSSLUG00000001792)	gpat3 (ENSSLUG00000001734)
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00500000044904.a.b.e.b.a.b	ENSGT00950000183234	ENSGT00940000155402.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a
European seabass	MODERN SPECIES	18	ENSDLAG00005028917	ENSDLAG00005019858	ENSDLAG00005019828	ENSDLAG00005019720	ENSDLAG00005010546	ENSDLAG00005032993	tcf7l1a (ENSDLAG00005014881)	ENSDLAG00005012307	ENSDLAG00005032024	ENSDLAG00005005667	ENSDLAG00005005593	GFRA2 (ENSDLAG00005027802) #17	pbdc1 (ENSDLAG00005034167)	xpo7 (ENSDLAG00005003106) #19	ENSDLAG00005027132 ##34	ENSDLAG00005026881 #22	ENSDLAG00005024328	HELQ (ENSDLAG00005024295)	mrps18c (ENSDLAG00005024288)	abraxas1 (ENSDLAG00005024284)	gpat3 (ENSDLAG00005024256)	ENSDLAG00005028985	ENSDLAG00005024227	ENSDLAG00005024234	ENSDLAG00005034189	ENSDLAG00005014478	ENSDLAG00005026354	ENSDLAG00005027118	ENSDLAG00005033707	meis2b (ENSDLAG00005020388)	gjd2b (ENSDLAG00005020379)
Large yellow croaker	MODERN SPECIES	480	ENSLCRG00005004914	actr1b (ENSLCRG00005004765)	npy8ar (ENSLCRG00005004758)	ENSLCRG00005004757	ENSLCRG00005004756	ENSLCRG00005004751	COX5B (ENSLCRG00005004745)	dbnla (ENSLCRG00005004741)	tcf7l1a (ENSLCRG00005004734)	ENSLCRG00005004732	dusp11 (ENSLCRG00005004730)	ATP6V1B2 (ENSLCRG00005004655)	ENSLCRG00005004651 #17	xpo7 (ENSLCRG00005003644) #19	pbdc1 (ENSLCRG00005003631)	dmtn (ENSLCRG00005003630) #22	ppp3ccb (ENSLCRG00005003155) ##34	MYL5 (ENSLCRG00005003106)	hpse (ENSLCRG00005003105)	ENSLCRG00005003103	ENSLCRG00005003070	ENSLCRG00005003055	galnt11 (ENSLCRG00005003033)	gcm2 (ENSLCRG00005003026)	ENSLCRG00005003020	ENSLCRG00005002240	zbtb14 (ENSLCRG00005002230)	lama1 (ENSLCRG00005001291)	ENSLCRG00005001261	ENSLCRG00005001188	ENSLCRG00005001069
Gilthead seabream	DUPLICATION
Gilthead seabream	MODERN SPECIES	3	ENSSAUG00010012741	dusp11 (ENSSAUG00010012742)	ATP6V1B2 (ENSSAUG00010012776)	ENSSAUG00010015429	ENSSAUG00010015430	ENSSAUG00010015431	xpo7 (ENSSAUG00010015454) #19	pbdc1 (ENSSAUG00010018718)	dmtn (ENSSAUG00010018729) #22	ENSSAUG00010018905	ppp3ccb (ENSSAUG00010018912) ##34	MYL5 (ENSSAUG00010020284)	hpse (ENSSAUG00010020296)	HELQ (ENSSAUG00010020300)	ENSSAUG00010020302	dmtn (ENSSAUG00010020304) #22	ppp3ccb (ENSSAUG00010020322) ##34	hpse (ENSSAUG00010020907)	mrps18c (ENSSAUG00010020909)	abraxas1 (ENSSAUG00010020919)	ENSSAUG00010020923	ENSSAUG00010020926	ENSSAUG00010020927	ENSSAUG00010020931	ENSSAUG00010020934	ENSSAUG00010010538	ENSSAUG00010010540	ENSSAUG00010010542	ENSSAUG00010010543	ENSSAUG00010010544	capslb (ENSSAUG00010010546)
Gilthead seabream	MODERN SPECIES	3	COX5B (ENSSAUG00010012698)	ENSSAUG00010012711	ENSSAUG00010012714	dbnla (ENSSAUG00010012717)	tcf7l1a (ENSSAUG00010012735)	ENSSAUG00010012738	ENSSAUG00010012739	ENSSAUG00010012741	dusp11 (ENSSAUG00010012742)	ATP6V1B2 (ENSSAUG00010012776)	ENSSAUG00010015429	ENSSAUG00010015430	ENSSAUG00010015431	xpo7 (ENSSAUG00010015454) #19	pbdc1 (ENSSAUG00010018718)	dmtn (ENSSAUG00010018729) #22	ENSSAUG00010018905	ppp3ccb (ENSSAUG00010018912) ##34	MYL5 (ENSSAUG00010020284)	hpse (ENSSAUG00010020296)	HELQ (ENSSAUG00010020300)	ENSSAUG00010020302	dmtn (ENSSAUG00010020304) #22	ppp3ccb (ENSSAUG00010020322) ##34	hpse (ENSSAUG00010020907)	mrps18c (ENSSAUG00010020909)	abraxas1 (ENSSAUG00010020919)	ENSSAUG00010020923	ENSSAUG00010020926	ENSSAUG00010020927	ENSSAUG00010020931
Tetraodontidae	ANCESTRAL SPECIES	21	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00530000062932	ENSGT00940000155214.k.a	ENSGT00440000039084.a.b	ENSGT00390000001761	ENSGT00940000165981	ENSGT00530000064123
Fugu	MODERN SPECIES	18	FGFR1 (ENSTRUG00000018627)	kctd9b (ENSTRUG00000018628)	marchf5l (ENSTRUG00000018629)	actr1b (ENSTRUG00000018630)	npy8ar (ENSTRUG00000018631)	dbnla (ENSTRUG00000018633)	tcf7l1a (ENSTRUG00000018634)	ENSTRUG00000018635	ATP6V1B2 (ENSTRUG00000018637)	GFRA2 (ENSTRUG00000018638) #17	ENSTRUG00000033476	ENSTRUG00000030281	ENSTRUG00000032753	xpo7 (ENSTRUG00000001082) #19	pbdc1 (ENSTRUG00000027342)	dmtn (ENSTRUG00000018641) #22	ppp3ccb (ENSTRUG00000018642) ##34	hpse (ENSTRUG00000018643)	HELQ (ENSTRUG00000018644)	mrps18c (ENSTRUG00000028095)	abraxas1 (ENSTRUG00000018645)	gpat3 (ENSTRUG00000018646)	NKX6-1 (ENSTRUG00000026306)	rpl17 (ENSTRUG00000025797)	MFHAS1 (ENSTRUG00000018650)	golga2 (ENSTRUG00000018651)	dnm1a (ENSTRUG00000018652)	ENSTRUG00000018653	bbln (ENSTRUG00000028996)	surf2 (ENSTRUG00000018655)	surf4 (ENSTRUG00000018656)
Tetraodon	MODERN SPECIES	19	kctd9b (ENSTNIG00000013598)	marchf5l (ENSTNIG00000013599)	actr1b (ENSTNIG00000013600)	npy8ar (ENSTNIG00000013601)	COX5B (ENSTNIG00000013602)	dbnla (ENSTNIG00000013603)	tcf7l1a (ENSTNIG00000013604)	ENSTNIG00000013605	dusp11 (ENSTNIG00000013606)	ENSTNIG00000013607	ENSTNIG00000013608	ENSTNIG00000000400	GFRA2 (ENSTNIG00000013609) #17	xpo7 (ENSTNIG00000004671) #19	pbdc1 (ENSTNIG00000005669)	dmtn (ENSTNIG00000005670) #22	ppp3ccb (ENSTNIG00000005671) ##34	hpse (ENSTNIG00000005672)	HELQ (ENSTNIG00000005673)	mrps18c (ENSTNIG00000005674)	abraxas1 (ENSTNIG00000005675)	gpat3 (ENSTNIG00000005676)	nkx6.1 (ENSTNIG00000009010)	rpl17 (ENSTNIG00000009011)	MFHAS1 (ENSTNIG00000009012)	golga2 (ENSTNIG00000009013)	dnm1a (ENSTNIG00000009014)	ENSTNIG00000009015	bbln (ENSTNIG00000009016)	surf2 (ENSTNIG00000009017)	surf4 (ENSTNIG00000004786)
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023.b	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00950000183234	ENSGT00940000155402.a.b	ENSGT00510000049239.b.a
Anabantaria	ANCESTRAL SPECIES	12	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023.b	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00500000044904.a.b.e.a	ENSGT00950000183234	ENSGT00940000155402.a.b
Zig-zag eel	MODERN SPECIES	3	stc1l (ENSMAMG00000011830)	ENSMAMG00000011845	kctd9b (ENSMAMG00000011867)	ENSMAMG00000011920	ENSMAMG00000011939	npy8ar (ENSMAMG00000011965)	ENSMAMG00000011987	dbnla (ENSMAMG00000011997)	tcf7l1a (ENSMAMG00000012013)	ENSMAMG00000012036	ENSMAMG00000012062	ENSMAMG00000012090	GFRA2 (ENSMAMG00000012126) #17	xpo7 (ENSMAMG00000012156) #19	pbdc1 (ENSMAMG00000012250)	dmtn (ENSMAMG00000012271) #22	ENSMAMG00000012284 ##34	ENSMAMG00000012337	hpse (ENSMAMG00000012352)	HELQ (ENSMAMG00000012364)	mrps18c (ENSMAMG00000026215)	abraxas1 (ENSMAMG00000012397)	gpat3 (ENSMAMG00000012423)	ENSMAMG00000012447	nkx6.1 (ENSMAMG00000012450)	ENSMAMG00000012465	ENSMAMG00000012520	ENSMAMG00000012527	ENSMAMG00000012536	ENSMAMG00000012591	ENSMAMG00000012597
Anabantoidei	ANCESTRAL SPECIES	16	ENSGT00940000158973.a.b	ENSGT00950000183125.b.a.a.a.a.a	ENSGT00390000003652.d	ENSGT01030000234539.b.b.a.i	ENSGT00940000165717	ENSGT00940000158107.a.a	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023.b	ENSGT00390000004874.a.b	ENSGT00940000161682.i	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00500000044904.a.b.e.a	ENSGT00950000183234
Climbing perch	MODERN SPECIES	3	ENSATEG00000000460	ENSATEG00000000436	ENSATEG00000000411	ENSATEG00000000385	DUSP26 (ENSATEG00000027239)	ENSATEG00000000343	dbnla (ENSATEG00000000324)	tcf7l1a (ENSATEG00000025217)	ENSATEG00000000311	ENSATEG00000026312	dusp11 (ENSATEG00000000234)	ENSATEG00000000167	GFRA2 (ENSATEG00000000060) #17	xpo7 (ENSATEG00000023484) #19	pbdc1 (ENSATEG00000025714)	dmtn (ENSATEG00000023472) #22	ENSATEG00000023456 ##34	ENSATEG00000023445	hpse (ENSATEG00000023437)	ENSATEG00000023434	HELQ (ENSATEG00000023420)	mrps18c (ENSATEG00000027902)	abraxas1 (ENSATEG00000026181)	gpat3 (ENSATEG00000023407)	nkx6.1 (ENSATEG00000023404)	ENSATEG00000023387	ENSATEG00000023384	ENSATEG00000023381	ENSATEG00000023366	ENSATEG00000023346	ENSATEG00000023334
Siamese fighting fish	MODERN SPECIES	3	ENSBSLG00000014514	ENSBSLG00000014489	ZMIZ2 (ENSBSLG00000014403)	ENSBSLG00000014388	DUSP26 (ENSBSLG00000014373)	COX5B (ENSBSLG00000014362)	ENSBSLG00000014334	tcf7l1a (ENSBSLG00000014304)	ENSBSLG00000014293	ENSBSLG00000014278	dusp11 (ENSBSLG00000014263)	ATP6V1B2 (ENSBSLG00000014065)	GFRA2 (ENSBSLG00000013611) #17	xpo7 (ENSBSLG00000013212) #19	pbdc1 (ENSBSLG00000013015)	dmtn (ENSBSLG00000013003) #22	ppp3ccb (ENSBSLG00000012409) ##34	ENSBSLG00000012336	HELQ (ENSBSLG00000012143)	mrps18c (ENSBSLG00000012122)	abraxas1 (ENSBSLG00000011978)	nkx6.1 (ENSBSLG00000011617)	rpl17 (ENSBSLG00000011009)	MFHAS1 (ENSBSLG00000010998)	ppp1r3b (ENSBSLG00000010990)	lmbrd2b (ENSBSLG00000010833)	ENSBSLG00000010780	capslb (ENSBSLG00000010741)	ENSBSLG00000010687	myo5b (ENSBSLG00000010335)	ENSBSLG00000010325
Carangaria	ANCESTRAL SPECIES	17	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023.b	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00950000183234	ENSGT00940000155402.a.b	ENSGT00510000049239.b.a
Carangaria_A	ANCESTRAL SPECIES	48	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000161682.i	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a
Barramundi perch	MODERN SPECIES	605															pbdc1 (ENSLCAG00010011488)	dmtn (ENSLCAG00010011485) #22	ppp3ccb (ENSLCAG00010010739) ##34	ENSLCAG00010010564	hpse (ENSLCAG00010010557)	HELQ (ENSLCAG00010010535)	mrps18c (ENSLCAG00010010526)	abraxas1 (ENSLCAG00010010519)	gpat3 (ENSLCAG00010010484)
Seriola	ANCESTRAL SPECIES	163																ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000161682.i	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a
Greater amberjack	MODERN SPECIES	224																dmtn (ENSSDUG00000015467) #22	ppp3ccb (ENSSDUG00000015519) ##34	ENSSDUG00000015581	hpse (ENSSDUG00000015608)	HELQ (ENSSDUG00000015665)	mrps18c (ENSSDUG00000015676)	abraxas1 (ENSSDUG00000015688)	gpat3 (ENSSDUG00000015712)	nkx6.1 (ENSSDUG00000015738)	rpl17 (ENSSDUG00000015761)	MFHAS1 (ENSSDUG00000015819)	ppp1r3b (ENSSDUG00000015830)	lmbrd2b (ENSSDUG00000015850)	ENSSDUG00000015917
Yellowtail amberjack	MODERN SPECIES	2864																dmtn (ENSSLDG00000002439) #22	ENSSLDG00000002428 ##34
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT00940000154314.a	ENSGT00940000155860.b	ENSGT00390000005989.b.b	ENSGT00940000154704.c.c	ENSGT00410000025802	ENSGT00940000155657	ENSGT00940000161915.b	ENSGT00940000156732.a.a	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847.c	ENSGT00940000155068.a.a	ENSGT00940000156168.B #17	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000163023.b	ENSGT00390000004874.a.b	ENSGT00940000157350	ENSGT00940000165965	ENSGT00530000063424.b	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000158928	ENSGT00940000159475.c	ENSGT00390000018651.a	ENSGT00950000183234	ENSGT00940000155402.a.b.l	ENSGT01030000234908
Turbot	MODERN SPECIES	7	ENSSMAG00000009342	stc1l (ENSSMAG00000009300)	ENSSMAG00000009265	ENSSMAG00000034455	wdr45 (ENSSMAG00000009227)	ENSSMAG00000009215	ENSSMAG00000009197	ENSSMAG00000034909	ENSSMAG00000009168	ENSSMAG00000009165	ENSSMAG00000021812 #17	ENSSMAG00000009149 #17	ENSSMAG00000036211	xpo7 (ENSSMAG00000032317) #19	pbdc1 (ENSSMAG00000029601)	dmtn (ENSSMAG00000024114) #22	ENSSMAG00000031785 ##34	ENSSMAG00000038004	HELQ (ENSSMAG00000031179)	mrps18c (ENSSMAG00000037445)	abraxas1 (ENSSMAG00000037441)	gpat3 (ENSSMAG00000035292)	nkx6.1 (ENSSMAG00000008198)	ENSSMAG00000008225	ENSSMAG00000008230	ENSSMAG00000008242	ENSSMAG00000031721	ENSSMAG00000008284	ENSSMAG00000029577	ENSSMAG00000031401	ENSSMAG00000008409
Tongue sole	MODERN SPECIES	5	rbm18 (ENSCSEG00000017587)	lhx6a (ENSCSEG00000017597)	morn5 (ENSCSEG00000017608)	ndufa8 (ENSCSEG00000017614)	si:ch211-243g18.2 (ENSCSEG00000017629)	rbp4l (ENSCSEG00000017648)	PDE6B (ENSCSEG00000017653)	ENSCSEG00000017669	ENSCSEG00000017672	nnt (ENSCSEG00000017705)	ENSCSEG00000017731	fgf10a (ENSCSEG00000017732)	GFRA2 (ENSCSEG00000017738) #17	xpo7 (ENSCSEG00000017746) #19	pbdc1 (ENSCSEG00000017787)	dmtn (ENSCSEG00000017799) #22	ATP6V1B2 (ENSCSEG00000017810)	dusp11 (ENSCSEG00000017836)	ENSCSEG00000017847	ENSCSEG00000017856	wdr91 (ENSCSEG00000017864)	hmgcs1 (ENSCSEG00000017895)	YTHDC2 (ENSCSEG00000017911)	psmb10 (ENSCSEG00000017959)	ndor1 (ENSCSEG00000017975)	ntmt1 (ENSCSEG00000017989)	ier5l (ENSCSEG00000017996)	ptpa (ENSCSEG00000018006)	crata (ENSCSEG00000018060)	ENSCSEG00000018101	june (ENSCSEG00000018115)
Pinecone sodierfish	MODERN SPECIES	3	kctd9b (ENSMMDG00005020743)	marchf5l (ENSMMDG00005020746)	ACTR1B (ENSMMDG00005020749)	npy8ar (ENSMMDG00005020758)	COX5B (ENSMMDG00005020951)	ENSMMDG00005020953	tcf7l1a (ENSMMDG00005020954)	ENSMMDG00005020957	dusp11 (ENSMMDG00005020958)	ATP6V1B2 (ENSMMDG00005020967)	ENSMMDG00005021017	ENSMMDG00005021018 #17	GFRA2 (ENSMMDG00005021022) #17	xpo7 (ENSMMDG00005021048) #19	pbdc1 (ENSMMDG00005021844)	dmtn (ENSMMDG00005021847) #22	ppp3ccb (ENSMMDG00005021889) ##34	MYL5 (ENSMMDG00005022949)	hpse (ENSMMDG00005022951)	HELQ (ENSMMDG00005022960)	mrps18c (ENSMMDG00005022973)	abraxas1 (ENSMMDG00005022974)	gpat3 (ENSMMDG00005022976)	nkx6.1 (ENSMMDG00005022979)	rpl17 (ENSMMDG00005022980)	ENSMMDG00005022986	lmbrd2b (ENSMMDG00005023002)	capslb (ENSMMDG00005023108)	ENSMMDG00005023113	myo5b (ENSMMDG00005023295)	cfap53 (ENSMMDG00005024746)
Cod	MODERN SPECIES	17	ENSGMOG00000026568	stc1l (ENSGMOG00000030223)	ENSGMOG00000012944	kctd9b (ENSGMOG00000014201)	ENSGMOG00000028456	ENSGMOG00000017491	npy8ar (ENSGMOG00000017513)	ENSGMOG00000030473	dbnla (ENSGMOG00000027970)	tcf7l1a (ENSGMOG00000006333)	ENSGMOG00000034173	dusp11 (ENSGMOG00000028702)	ENSGMOG00000008712 #17	xpo7 (ENSGMOG00000019505) #19	pbdc1 (ENSGMOG00000019503)	dmtn (ENSGMOG00000025083) #22	ENSGMOG00000000016 ##34	ENSGMOG00000012980	hpse (ENSGMOG00000000018)	HELQ (ENSGMOG00000000020)	mrps18c (ENSGMOG00000032590)	ENSGMOG00000000023	ENSGMOG00000035135	gpat3 (ENSGMOG00000031783)	nkx6.1 (ENSGMOG00000029517)	ENSGMOG00000012984	ENSGMOG00000025798	lmbrd2b (ENSGMOG00000012999)	ENSGMOG00000019290	ENSGMOG00000035554	myo5b (ENSGMOG00000019264)
Protacanthopterygii	ANCESTRAL SPECIES	77	ENSGT00940000155101.e	ENSGT00950000183174.A	ENSGT00500000044909	ENSGT00950000182888.b	ENSGT00950000182869.e.b.g.b	ENSGT00550000074856.c.a	ENSGT00550000074798.a.a	ENSGT00940000159978	ENSGT00940000153654.af	ENSGT00940000180245	ENSGT00940000153654.`f.b	ENSGT00950000182772.B.a.a	ENSGT00940000155679.d	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000154115.d ##34	ENSGT00940000166302.d	ENSGT00400000024390	ENSGT00390000002216	ENSGT00940000155460	ENSGT00390000015757.y	ENSGT00940000157438.d	ENSGT00390000015757.z	ENSGT00940000164013	ENSGT00670000098179.d.b	ENSGT00670000098179.d.a	ENSGT00940000156161.A	ENSGT00940000159066	ENSGT00940000168590	ENSGT00940000155983.a.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	353	ENSGT00940000157468.b.o	ENSGT00940000156428.bd	ENSGT00940000155101.e.j	ENSGT00950000183174.A.c	ENSGT00500000044909.c	ENSGT00950000182888.b.e.a	ENSGT00950000182869.e.b.g.b.d	ENSGT00550000074856.c.a.c	ENSGT00550000074798.a.a.q.a	ENSGT00940000159978.s.a	ENSGT00940000153654.`f.b	ENSGT00950000182772.B.a.a.j.b	ENSGT00940000155679.d.e.a	ENSGT00940000153139.B.a.c #19	ENSGT00390000016333.i	ENSGT00950000182850.a.b.b.b.b.g #22	ENSGT00940000154115.d.d ##34	ENSGT00400000024390.c	ENSGT00390000002216.c.b	ENSGT00940000155460.n.b	ENSGT00940000157438.d.c	ENSGT00390000015757.z	ENSGT00940000164013	ENSGT00670000098179.d.b.a.a.b	ENSGT00670000098179.d.b.a.a.a	ENSGT00670000098179.d.a.k	ENSGT00940000156161.A.p
Salmoninae_a	ANCESTRAL SPECIES	87	ENSGT00940000163301.c.a.a.b	ENSGT00940000157468.b.o	ENSGT00940000155101.e.j	ENSGT00950000183174.A.c	ENSGT00500000044909.c	ENSGT00950000182888.b.e.a	ENSGT00950000182869.e.b.g.b.d	ENSGT00550000074856.c.a.c	ENSGT00550000074798.a.a.q.a	ENSGT00940000159978.s.a	ENSGT00940000153654.`f.b	ENSGT00950000182772.B.a.a.j.b	ENSGT00940000155679.d.e.a	ENSGT00940000153139.B.a.c #19	ENSGT00390000016333.i	ENSGT00950000182850.a.b.b.b.b.g #22	ENSGT00940000154115.d.d ##34	ENSGT00400000024390.c	ENSGT00390000002216.c.b	ENSGT00940000155460.n.b	ENSGT00940000157438.d.c	ENSGT00390000015757.z	ENSGT00940000164013	ENSGT00670000098179.d.b.a.a.b	ENSGT00670000098179.d.b.a.a.a	ENSGT00670000098179.d.a.k	ENSGT00940000156161.A.o.a	ENSGT00940000159066.e	ENSGT00940000155983.a.b.d	ENSGT00390000009453.gb.c	ENSGT01100000263544.c.a.a.b.g
Oncorhynchus	ANCESTRAL SPECIES	67	ENSGT00940000157468.b.o	ENSGT00940000156428.bd	ENSGT00940000155101.e.j	ENSGT00950000183174.A.c	ENSGT00500000044909.c	ENSGT00950000182888.b.e.a	ENSGT00950000182869.e.b.g.b.d	ENSGT00550000074856.c.a.c	ENSGT00550000074798.a.a.q.a	ENSGT00940000159978.s.a	ENSGT00940000153654.af	ENSGT00950000182772.B.a.a.j.b	ENSGT00940000155679.d.e.a	ENSGT00940000153139.B.a.c #19	ENSGT00390000016333.i	ENSGT00950000182850.a.b.b.b.b.g #22	ENSGT00940000154115.d.d ##34	ENSGT00400000024390.c	ENSGT00390000002216.c.b	ENSGT00940000155460.n.b	ENSGT00940000157438.d.c	ENSGT00390000015757.z	ENSGT00940000164013.d	ENSGT00670000098179.d.b.a.a.b	ENSGT00670000098179.d.b.a.a.a	ENSGT00670000098179.d.a.k	ENSGT00940000156161.A.o.a	ENSGT00940000159066.e	ENSGT00940000155983.a.b.d	ENSGT00390000009453.gb.c	ENSGT01100000263544.c.a.a.b.g
Rainbow trout	MODERN SPECIES	26	ENSOMYG00000074688	ENSOMYG00000000862	ENSOMYG00000000664	ENSOMYG00000000080	tor4aa (ENSOMYG00000047398)	ENSOMYG00000047378	ENSOMYG00000071407	ENSOMYG00000047340	pi4kaa (ENSOMYG00000047266)	ENSOMYG00000047251	ENSOMYG00000048403	ENSOMYG00000047234	ENSOMYG00000047150	xpo7 (ENSOMYG00000046957) #19	ENSOMYG00000046802	dmtn (ENSOMYG00000021598) #22	ENSOMYG00000046720	spp1 (ENSOMYG00000046677)	ENSOMYG00000046671	vldlr (ENSOMYG00000044977)	ENSOMYG00000044771	pum3 (ENSOMYG00000044752)	ENSOMYG00000044071	ENSOMYG00000077330	ENSOMYG00000074341	ENSOMYG00000074021	ENSOMYG00000072873	ENSOMYG00000050153	ENSOMYG00000061803	ENSOMYG00000049388	ENSOMYG00000072385
Oncorhynchus_a	ANCESTRAL SPECIES	74	ENSGT00940000157468.b.o	ENSGT00940000156428.bd	ENSGT00940000155101.e.j	ENSGT00950000183174.A.c	ENSGT00500000044909.c	ENSGT00950000182888.b.e.a	ENSGT00950000182869.e.b.g.b.d	ENSGT00550000074856.c.a.c	ENSGT00550000074798.a.a.q.a	ENSGT00940000159978.s.a	ENSGT00940000153654.af	ENSGT00950000182772.B.a.a.j.b	ENSGT00940000155679.d.e.a	ENSGT00940000153139.B.a.c #19	ENSGT00390000016333.i	ENSGT00950000182850.a.b.b.b.b.g #22	ENSGT00940000154115.d.d ##34	ENSGT00400000024390.c	ENSGT00390000002216.c.b	ENSGT00940000155460.n.b	ENSGT00940000157438.d.c	ENSGT00390000015757.z	ENSGT00940000164013.d	ENSGT00670000098179.d.b.a.a.b	ENSGT00670000098179.d.a.k	ENSGT00940000156161.A.o.a	ENSGT00940000159066.e	ENSGT00940000155983.a.b.d	ENSGT00390000009453.gb.c	ENSGT01100000263544.c.a.a.b.g	ENSGT00940000156471.a.e
Coho salmon	MODERN SPECIES	15	ENSOKIG00005021330	ENSOKIG00005021621	NAA25 (ENSOKIG00005021702)	brap (ENSOKIG00005021927)	tor4aa (ENSOKIG00005022121)	ENSOKIG00005022139	ENSOKIG00005006099	SLC25A1 (ENSOKIG00005006155)	pi4kaa (ENSOKIG00005006349)	HIC2 (ENSOKIG00005007498)	UBE2L5 (ENSOKIG00005007504)	ckmt2a (ENSOKIG00005007515)	RASGRF2 (ENSOKIG00005007598)	xpo7 (ENSOKIG00005008326) #19	PBDC1 (ENSOKIG00005012996)	dmtn (ENSOKIG00005013010) #22	ENSOKIG00005013086 ##34	spp1 (ENSOKIG00005014310)	ENSOKIG00005014319	vldlr (ENSOKIG00005014361)	KCNV2 (ENSOKIG00005014897)	pum3 (ENSOKIG00005014917)	ENSOKIG00005015030	ENSOKIG00005015247	ENSOKIG00005015255	ENSOKIG00005015269	ENSOKIG00005015274	ENSOKIG00005015280	ENSOKIG00005015285	ENSOKIG00005015293	ENSOKIG00005015300
Chinook salmon	MODERN SPECIES	12	ENSOTSG00005022571	ENSOTSG00005022492	PITPNB (ENSOTSG00005022480)	NAA25 (ENSOTSG00005022476)	brap (ENSOTSG00005022387)	tor4aa (ENSOTSG00005022385)	ENSOTSG00005022384	SLC25A1 (ENSOTSG00005022343)	PI4KA (ENSOTSG00005021281)	HIC2 (ENSOTSG00005021264)	UBE2L5 (ENSOTSG00005021263)	ckmt2a (ENSOTSG00005021213)	RASGRF2 (ENSOTSG00005016851)	xpo7 (ENSOTSG00005012328) #19	pbdc1 (ENSOTSG00005012291)	dmtn (ENSOTSG00005012288) #22	ppp3ccb (ENSOTSG00005011948) ##34	spp1 (ENSOTSG00005011947)	vldlr (ENSOTSG00005010375)	KCNV2 (ENSOTSG00005010374)	PUM3 (ENSOTSG00005010371)	ENSOTSG00005009184	ENSOTSG00005009175	hspb9l (ENSOTSG00005009173)	ENSOTSG00005009172	ENSOTSG00005008436	dusp4 (ENSOTSG00005008407)	ENSOTSG00005008404	zgc:86764 (ENSOTSG00005008399)	slc26a1 (ENSOTSG00005008395)	PDE6B (ENSOTSG00005006517)
Salmo	ANCESTRAL SPECIES	54	ENSGT00940000163301.c.a.a.b	ENSGT00940000157468.b.o	ENSGT00940000155101.e.j	ENSGT00950000183174.A.c	ENSGT00500000044909.c	ENSGT00950000182888.b.e.a	ENSGT00950000182869.e.b.g.b.d	ENSGT00550000074856.c.a.c	ENSGT00550000074798.a.a.q.a	ENSGT00940000159978.s.a	ENSGT00940000153654.`f.b	ENSGT00950000182772.B.a.a.j.b	ENSGT00940000155679.d.e.a	ENSGT00940000153139.B.a.c #19	ENSGT00390000016333.i	ENSGT00950000182850.a.b.b.b.b.g #22	ENSGT00940000154115.d.d ##34	ENSGT00400000024390.c	ENSGT00390000002216.c.b	ENSGT00940000155460.n.b	ENSGT00940000157438.d.c	ENSGT00390000015757.z	ENSGT00940000164013	ENSGT00670000098179.d.a.k	ENSGT00940000156161.A.o.a	ENSGT00940000159066.e	ENSGT00940000155983.a.b.d	ENSGT00390000009453.gb.c	ENSGT01100000263544.c.a.a.b.g	ENSGT00510000047107.B.c.d	ENSGT00940000156471.a.e
River trout	MODERN SPECIES	15	ENSSTUG00000025253	ENSSTUG00000025269	ENSSTUG00000025629	NAA25 (ENSSTUG00000025671)	brap (ENSSTUG00000025931)	tor4aa (ENSSTUG00000026854)	VDAC3 (ENSSTUG00000026859)	SLC25A1 (ENSSTUG00000026875)	pi4kaa (ENSSTUG00000027067)	HIC2 (ENSSTUG00000028859)	ENSSTUG00000028864	ckmt2a (ENSSTUG00000028892)	RASGRF2 (ENSSTUG00000029003)	xpo7 (ENSSTUG00000031531) #19	pbdc1 (ENSSTUG00000032741)	dmtn (ENSSTUG00000032765) #22	ppp3ccb (ENSSTUG00000032896) ##34	spp1 (ENSSTUG00000036943)	ENSSTUG00000036946	ENSSTUG00000036957	vldlr (ENSSTUG00000037262)	KCNV2 (ENSSTUG00000045706)	pum3 (ENSSTUG00000045740)	ENSSTUG00000046121	ENSSTUG00000046173	ENSSTUG00000046178	ENSSTUG00000046183	ENSSTUG00000046188	ENSSTUG00000046192	ENSSTUG00000046196	ENSSTUG00000046198
Atlantic salmon	MODERN SPECIES		ENSSSAG00000080542	ENSSSAG00000112958	ENSSSAG00000106460	ENSSSAG00000080800	brap (ENSSSAG00000080969)	tor4aa (ENSSSAG00000099633)	ENSSSAG00000080973	ENSSSAG00000100677	pi4kaa (ENSSSAG00000080982)	ENSSSAG00000080397	ENSSSAG00000110550	ckmt2 (ENSSSAG00000000174)	ENSSSAG00000000533	xpo7 (ENSSSAG00000107149) #19	ENSSSAG00000096570	dema (ENSSSAG00000001462) #22	pp2bc (ENSSSAG00000001614) ##34	spp1 (ENSSSAG00000100947)	ENSSSAG00000003155	vldlr (ENSSSAG00000003279)	ENSSSAG00000003693	pum3 (ENSSSAG00000003731)	ENSSSAG00000046417	ENSSSAG00000085506	ENSSSAG00000004003	dusp4 (ENSSSAG00000005289)	ENSSSAG00000005301	ENSSSAG00000115507	zgc:86764 (ENSSSAG00000005322)	slc26a1 (ENSSSAG00000098190)	rbp4l (ENSSSAG00000005370)
Huchen	MODERN SPECIES	919						TOR4A (ENSHHUG00000025525)	zgc:56235 (ENSHHUG00000025438)	SLC25A1 (ENSHHUG00000025395)	PI4KA (ENSHHUG00000025319)	ENSHHUG00000025313	UBE2L5 (ENSHHUG00000025304)	ckmt2a (ENSHHUG00000025161)	RASGRF2 (ENSHHUG00000025044)	xpo7 (ENSHHUG00000024568) #19	pbdc1 (ENSHHUG00000024561)	dmtn (ENSHHUG00000024558) #22	ppp3ccb (ENSHHUG00000023176) ##34	spp1 (ENSHHUG00000023157)	ENSHHUG00000023135	vldlr (ENSHHUG00000021769)	KCNV2 (ENSHHUG00000021749)	pum3 (ENSHHUG00000021703)	ENSHHUG00000021571	ENSHHUG00000021549	ENSHHUG00000021543	ENSHHUG00000021540	ENSHHUG00000021536	ENSHHUG00000021531	ENSHHUG00000021525	ENSHHUG00000021518	ENSHHUG00000021515
Salmoninae	ANCESTRAL SPECIES	824																ENSGT00950000182850.a.b.b.b.b.h #22	ENSGT00940000154115.d.c ##34	ENSGT00400000024390.d	ENSGT00390000002216.c.a	ENSGT00940000155460.n.a	ENSGT00390000015757.y	ENSGT00940000157438.d.d	ENSGT00670000098179.d.a.l	ENSGT00670000098179.d.b.b
Salmoninae_a	ANCESTRAL SPECIES	24	ENSGT00940000165179.a	ENSGT00940000156428.bd	ENSGT00940000155101.e.i	ENSGT00950000183174.A.d	ENSGT00500000044909.d	ENSGT00950000182888.b.e.b	ENSGT00950000182869.e.b.g.b.c	ENSGT00550000074856.c.a.d	ENSGT00550000074798.a.a.q.b	ENSGT00940000159978.s.b	ENSGT00940000153654.af	ENSGT00950000182772.B.a.a.j.a	ENSGT00940000155679.d.e.b	ENSGT00940000153139.B.a.d #19	ENSGT00390000016333.j	ENSGT00950000182850.a.b.b.b.b.h #22	ENSGT00940000154115.d.c ##34	ENSGT00400000024390.d	ENSGT00390000002216.c.a	ENSGT00940000155460.n.a	ENSGT00390000015757.y	ENSGT00940000157438.d.d	ENSGT00670000098179.d.b.b.a	ENSGT00670000098179.d.a.l	ENSGT00670000098179.d.b.b.b	ENSGT00940000156161.A.o.b	ENSGT00940000159066.f	ENSGT00940000168590	ENSGT00940000155983.a.b.c	ENSGT00390000009453.gb.d	ENSGT01100000263544.c.a.a.b.h
Salmo	ANCESTRAL SPECIES	13	ENSGT00940000165179.a	ENSGT00940000156428.bd	ENSGT00940000155101.e.i	ENSGT00950000183174.A.d	ENSGT00500000044909.d	ENSGT00950000182888.b.e.b	ENSGT00950000182869.e.b.g.b.c	ENSGT00550000074856.c.a.d	ENSGT00550000074798.a.a.q.b	ENSGT00940000159978.s.b	ENSGT00940000153654.af	ENSGT00950000182772.B.a.a.j.a	ENSGT00940000155679.d.e.b	ENSGT00390000016333.j	ENSGT00940000153139.B.a.d #19	ENSGT00950000182850.a.b.b.b.b.h #22	ENSGT00940000166302.d	ENSGT00400000024390.d	ENSGT00390000002216.c.a	ENSGT00940000155460.n.a	ENSGT00390000015757.y	ENSGT00940000157438.d.d	ENSGT00670000098179.d.b.b.a	ENSGT00670000098179.d.a.l	ENSGT00670000098179.d.b.b.b	ENSGT00940000156161.A.o.b	ENSGT00940000159066.f	ENSGT00940000168590	ENSGT00940000155983.a.b.c	ENSGT00390000009453.gb.d	ENSGT01100000263544.c.a.a.b.h
River trout	MODERN SPECIES	6	ENSSTUG00000015699	ENSSTUG00000015480	ENSSTUG00000015458	pitpnb (ENSSTUG00000015426)	NAA25 (ENSSTUG00000015362)	brap (ENSSTUG00000015117)	TOR4A (ENSSTUG00000015099)	ENSSTUG00000015037	SLC25A1 (ENSSTUG00000014587)	HIC2 (ENSSTUG00000014445)	UBE2L5 (ENSSTUG00000014402)	ckmt2a (ENSSTUG00000014287)	RASGRF2 (ENSSTUG00000013940)	xpo7 (ENSSTUG00000011342) #19	pbdc1 (ENSSTUG00000011252)	dmtn (ENSSTUG00000011230) #22	ENSSTUG00000011189	ENSSTUG00000011182	spp1 (ENSSTUG00000011173)	ENSSTUG00000011123	vldlr (ENSSTUG00000002627)	KCNV2 (ENSSTUG00000002090)	ENSSTUG00000036340	hspb9l (ENSSTUG00000036326)	ENSSTUG00000036319	ENSSTUG00000035778	dusp4 (ENSSTUG00000035739)	ENSSTUG00000035727	ENSSTUG00000035712	zgc:86764 (ENSSTUG00000035618)	slc26a1 (ENSSTUG00000035599)
Atlantic salmon	MODERN SPECIES	4	ENSSSAG00000080714	pitpnb (ENSSSAG00000080688)	ENSSSAG00000080629	ENSSSAG00000080521	tor4aa (ENSSSAG00000080619)	ENSSSAG00000080605	ENSSSAG00000119324	pi4kaa (ENSSSAG00000080418)	ENSSSAG00000103870	ub2l3 (ENSSSAG00000080389)	ENSSSAG00000080382	ENSSSAG00000080140	ENSSSAG00000099207	xpo7 (ENSSSAG00000119701) #19	ENSSSAG00000079534	dmtn (ENSSSAG00000094544) #22	ENSSSAG00000079106 ##34	ENSSSAG00000106802	spp1 (ENSSSAG00000091532)	spp1 (ENSSSAG00000097659)	spp1 (ENSSSAG00000095024)	ENSSSAG00000079081	vldlr (ENSSSAG00000076621)	ENSSSAG00000076475	ENSSSAG00000076482	ENSSSAG00000076468	ENSSSAG00000095488	ENSSSAG00000075230	ENSSSAG00000075168	dusp4 (ENSSSAG00000095568)	ENSSSAG00000106062
Oncorhynchus	ANCESTRAL SPECIES	21	ENSGT00940000157468.b.p	ENSGT00940000165179.a	ENSGT00940000155101.e.i	ENSGT00950000183174.A.d	ENSGT00500000044909.d	ENSGT00950000182888.b.e.b	ENSGT00950000182869.e.b.g.b.c	ENSGT00550000074856.c.a.d	ENSGT00550000074798.a.a.q.b.b	ENSGT00940000159978.s.b	ENSGT00940000153654.`f.a.a	ENSGT00950000182772.B.a.a.j.a	ENSGT00940000155679.d.e.b	ENSGT00940000153139.B.a.d #19	ENSGT00390000016333.j	ENSGT00950000182850.a.b.b.b.b.h #22	ENSGT00940000154115.d.c ##34	ENSGT00400000024390.d	ENSGT00390000002216.c.a	ENSGT00940000155460.n.a	ENSGT00940000157438.d.d	ENSGT00390000015757.y	ENSGT00940000164013.c	ENSGT00670000098179.d.b.b.a	ENSGT00670000098179.d.a.l	ENSGT00670000098179.d.b.b.b	ENSGT00940000156161.A.o.b	ENSGT01100000265845	ENSGT00940000159066.f	ENSGT00940000168590	ENSGT00940000155983.a.b.c
Oncorhynchus_a	ANCESTRAL SPECIES	19	ENSGT00940000165179.a	ENSGT00940000155101.e.i	ENSGT00950000183174.A.d	ENSGT00500000044909.d	ENSGT00950000182888.b.e.b	ENSGT00950000182869.e.b.g.b.c	ENSGT00550000074856.c.a.d	ENSGT00550000074798.a.a.q.b.b	ENSGT00940000159978.s.b	ENSGT00940000153654.`f.a.a	ENSGT00950000182772.B.a.a.j.a	ENSGT00940000155679.d.e.b	ENSGT00940000155679.d.f	ENSGT00940000153139.B.a.d #19	ENSGT00390000016333.j	ENSGT00950000182850.a.b.b.b.b.h #22	ENSGT00940000154115.d.c ##34	ENSGT00400000024390.d	ENSGT00390000002216.c.a	ENSGT00940000155460.n.a	ENSGT00940000157438.d.d	ENSGT00390000015757.y	ENSGT00940000164013.c	ENSGT00670000098179.d.b.b.a	ENSGT00670000098179.d.a.l	ENSGT00670000098179.d.b.b.b	ENSGT00940000156161.A.o.b	ENSGT01100000265845	ENSGT00940000159066.f	ENSGT00940000168590	ENSGT00940000155983.a.b.c
Chinook salmon	MODERN SPECIES	33	ptpn11a (ENSOTSG00005042626)	ENSOTSG00005042679	pla2g3 (ENSOTSG00005042681)	pitpnb (ENSOTSG00005042687)	NAA25 (ENSOTSG00005042695)	brap (ENSOTSG00005042778)	TOR4A (ENSOTSG00005042780)	ENSOTSG00005042781	SLC25A1 (ENSOTSG00005042782)	PI4KA (ENSOTSG00005042790)	ENSOTSG00005042795	cyhr1 (ENSOTSG00005042797)	ENSOTSG00005042798	xpo7 (ENSOTSG00005042804) #19	pbdc1 (ENSOTSG00005043805)	dmtn (ENSOTSG00005043806) #22	spp1 (ENSOTSG00005043807)	ENSOTSG00005043809	vldlr (ENSOTSG00005043824)	KCNV2 (ENSOTSG00005046704)	ENSOTSG00005046706	ENSOTSG00005046707	ENSOTSG00005046709	hspb9l (ENSOTSG00005046711)	ENSOTSG00005046712	ENSOTSG00005046730	ENSOTSG00005046776	dusp4 (ENSOTSG00005046777)	ENSOTSG00005046778	ENSOTSG00005046779	zgc:86764 (ENSOTSG00005046780)
Coho salmon	MODERN SPECIES	26	ptpn11a (ENSOKIG00005002033)	ENSOKIG00005002245	pla2g3 (ENSOKIG00005002265)	ENSOKIG00005002378	pitpnb (ENSOKIG00005002395)	NAA25 (ENSOKIG00005002458)	tor4aa (ENSOKIG00005002592)	zgc:56235 (ENSOKIG00005002604)	SLC25A1 (ENSOKIG00005002637)	pi4kaa (ENSOKIG00005002855)	HIC2 (ENSOKIG00005003299)	ube2l3a (ENSOKIG00005003307)	ckmt2a (ENSOKIG00005003317)	RASGRF2 (ENSOKIG00005003338)	pbdc1 (ENSOKIG00005003485)	ENSOKIG00005003498 #22	ppp3ccb (ENSOKIG00005003539) ##34	spp1 (ENSOKIG00005003610)	ENSOKIG00005003626	vldlr (ENSOKIG00005004075)	KCNV2 (ENSOKIG00005013491)	ENSOKIG00005013497	hspb9l (ENSOKIG00005013506)	ENSOKIG00005013607	ENSOKIG00005014620	dusp4 (ENSOKIG00005014631)	ENSOKIG00005014650	ENSOKIG00005014667	zgc:86764 (ENSOKIG00005014693)	slc26a1 (ENSOKIG00005014762)	ENSOKIG00005014770
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000018459	ENSOMYG00000018738	tor4aa (ENSOMYG00000018751)	ENSOMYG00000018757	ENSOMYG00000070169	ENSOMYG00000018770	ENSOMYG00000042313	pi4kaa (ENSOMYG00000018843)	ENSOMYG00000054995	ENSOMYG00000019004	ENSOMYG00000019023	ENSOMYG00000019051	ENSOMYG00000019617	xpo7 (ENSOMYG00000021515) #19	ENSOMYG00000021586	dmtn (ENSOMYG00000069825) #22	ENSOMYG00000021617 ##34	ENSOMYG00000073848	spp1 (ENSOMYG00000021668)	ENSOMYG00000021684	vldlr (ENSOMYG00000022122)	ENSOMYG00000025435	ENSOMYG00000025501	ENSOMYG00000025515	ENSOMYG00000026060	ENSOMYG00000053420	dusp4 (ENSOMYG00000026384)	ENSOMYG00000026392	ENSOMYG00000026405	zgc:86764 (ENSOMYG00000026430)	slc26a1 (ENSOMYG00000026463)
Huchen	MODERN SPECIES	1662																dmtn (ENSHHUG00000044154) #22	ppp3ccb (ENSHHUG00000044179) ##34	spp1 (ENSHHUG00000044710)	ENSHHUG00000044713	vldlr (ENSHHUG00000044732)	KCNV2 (ENSHHUG00000046133)	ENSHHUG00000046136	hspb9l (ENSHHUG00000046155)	ENSHHUG00000046158	ENSHHUG00000046160
Northern pike	MODERN SPECIES	13	SLC25A1 (ENSELUG00000002451)	pi4kaa (ENSELUG00000002430)	HIC2 (ENSELUG00000002408)	ENSELUG00000002405	ENSELUG00000030963	ENSELUG00000025888	ENSELUG00000002402	ENSELUG00000028537	ENSELUG00000002399	UBE2L5 (ENSELUG00000002395)	ENSELUG00000029352	ckmt2a (ENSELUG00000002389)	RASGRF2 (ENSELUG00000002372)	xpo7 (ENSELUG00000002329) #19	pbdc1 (ENSELUG00000002300)	dmtn (ENSELUG00000002290) #22	ENSELUG00000002280	spp1 (ENSELUG00000002267)	ENSELUG00000002261	vldlr (ENSELUG00000002236)	KCNV2 (ENSELUG00000002219)	pum3 (ENSELUG00000002215)	ENSELUG00000001380	hspb9l (ENSELUG00000002193)	ENSELUG00000002184	dusp4 (ENSELUG00000002163)	ENSELUG00000002156	zgc:86764 (ENSELUG00000029876)	slc26a1 (ENSELUG00000002144)	ENSELUG00000034698	rbp4l (ENSELUG00000002138)
Osteoglossiformes	ANCESTRAL SPECIES	188	ENSGT00940000160296.j #27	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00940000155782.f	ENSGT00390000009948.d	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a	ENSGT00940000156732.a.b.e	ENSGT00940000157038.a.b	ENSGT00940000164699	ENSGT00940000155847	ENSGT00940000156168.B #17	ENSGT00940000159868.b #18	ENSGT00940000153139.B.a #19	ENSGT00390000016333	ENSGT00950000182850.a.b.b.b.b #22	ENSGT00940000156239.f	ENSGT00940000164380.b
Asian bonytongue	MODERN SPECIES	21	kctd9b (ENSSFOG00015027589)	actr1b (ENSSFOG00015004696)	marchf5l (ENSSFOG00015004657)	npy8ar (ENSSFOG00015004598)	cox5ba (ENSSFOG00015004590)	DBNL (ENSSFOG00015004574)	ENSSFOG00015026787	tcf7l1a (ENSSFOG00015004425)	ENSSFOG00015004391	ENSSFOG00015025286	ENSSFOG00015004317	dusp11 (ENSSFOG00015025576)	GFRA2 (ENSSFOG00015015943) #17	xpo7 (ENSSFOG00015015859) #19	pbdc1 (ENSSFOG00015015830)	dmtn (ENSSFOG00015015782) #22	adam9 (ENSSFOG00015015739)	ENSSFOG00015015665	ENSSFOG00015015649	ppp3ccb (ENSSFOG00015015580) ##34	TCIM (ENSSFOG00015015559)	ENSSFOG00015025014	ENSSFOG00015015440	sfrp1b (ENSSFOG00015015426)	ENSSFOG00015015387	zdhhc12b (ENSSFOG00015015374)	uap1l1 (ENSSFOG00015015353)	slc25a25b (ENSSFOG00015030265)	NAIF1 (ENSSFOG00015015307)	eeig1b (ENSSFOG00015025518)	ENSSFOG00015015295
P. kingsleyae	MODERN SPECIES	9	ENSPKIG00000018721	PTBP3 (ENSPKIG00000018677)	hsdl2 (ENSPKIG00000018620)	ENSPKIG00000018582	ythdc1 (ENSPKIG00000018497)	snx30 (ENSPKIG00000018432)	inip (ENSPKIG00000018405)	ENSPKIG00000018390	ENSPKIG00000018367	ENSPKIG00000018347	ENSPKIG00000018334	GFRA2 (ENSPKIG00000018311) #17	ENSPKIG00000018292 #18	xpo7 (ENSPKIG00000018175) #19	pbdc1 (ENSPKIG00000018127)	dmtn (ENSPKIG00000018115) #22	adam9 (ENSPKIG00000018077)	ENSPKIG00000018049	GNAZ (ENSPKIG00000018034)	sppl3 (ENSPKIG00000018000)	sdf2l1 (ENSPKIG00000017963)	ube2l3b (ENSPKIG00000017942)	hic2 (ENSPKIG00000017929)	pi4kaa (ENSPKIG00000017878)	ENSPKIG00000017835	SLC25A1 (ENSPKIG00000017818)	zgc:56235 (ENSPKIG00000017776)	glis3 (ENSPKIG00000017730)	rfx3 (ENSPKIG00000017641)	FOXN4 (ENSPKIG00000017607)	UNG (ENSPKIG00000017575)
Spotted gar	MODERN SPECIES	647	RHOBTB2 (ENSLOCG00000014937)	egr3 (ENSLOCG00000014936)	BIN3 (ENSLOCG00000014932)	kansl3 (ENSLOCG00000014926)	npffr1l1 (ENSLOCG00000014924)	bmp1b (ENSLOCG00000014917) #29	atp6v1b2 (ENSLOCG00000014912)	LZTS1 (ENSLOCG00000014910)	gfra2a (ENSLOCG00000014902) #17	DOK2 (ENSLOCG00000014900) #18	kazald3 (ENSLOCG00000014896)	xpo7 (ENSLOCG00000014884) #19	pbdc1 (ENSLOCG00000014881)	npm2b (ENSLOCG00000014878) #20	fgf17 (ENSLOCG00000014874)	dmtn (ENSLOCG00000014865) #22	ENSLOCG00000014859	naa10 (ENSLOCG00000014858)	arhgap4a (ENSLOCG00000014854)	ENSLOCG00000014852	l1cama (ENSLOCG00000014844)	ENSLOCG00000014841	ENSLOCG00000014839	ENSLOCG00000014837	ENSLOCG00000014835	HUWE1 (ENSLOCG00000014797)	ENSLOCG00000014794	ENSLOCG00000014792	FAM120C (ENSLOCG00000014788)	WNK3 (ENSLOCG00000014785)	ENSLOCG00000014784
Reedfish	MODERN SPECIES		ENSECRG00000007248	ENSECRG00000007240	stc1l (ENSECRG00000007229)	ido1 (ENSECRG00000007213)	ENSECRG00000007199	atp6v1b2 (ENSECRG00000007165)	LZTS1 (ENSECRG00000007151)	ENSECRG00000007146	gfra2a (ENSECRG00000007137) #17	ENSECRG00000007131	DOK2 (ENSECRG00000007126) #18	kazald3 (ENSECRG00000007104)	xpo7 (ENSECRG00000007066) #19	pbdc1 (ENSECRG00000007046)	fgf17 (ENSECRG00000007030)	dmtn (ENSECRG00000006995) #22	RIBC2 (ENSECRG00000006979)	ENSECRG00000005175	ENSECRG00000004863	ENSECRG00000004819	ENSECRG00000004806	yif1b (ENSECRG00000004798)	ENSECRG00000004783	ENSECRG00000004767	ENSECRG00000004756	ENSECRG00000004728	prdm4 (ENSECRG00000004698)	ASCL4 (ENSECRG00000004689)	ENSECRG00000004676	ENSECRG00000004662	ENSECRG00000004640