Glires	ANCESTRAL SPECIES		ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000000617	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37
Rodentia	ANCESTRAL SPECIES		ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.f	ENSGT01030000234531.A.b.b.b.e.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.e.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Myomorpha	ANCESTRAL SPECIES	3	ENSGT01030000234531.A.b.b.b.e.a	ENSGT01030000234531.A.b.b.b.e.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.b.a	ENSGT00940000157630.b.b	ENSGT00940000157630.a	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Muroidea	ANCESTRAL SPECIES	3	ENSGT01030000234531.A.b.b.b.e.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.b.a	ENSGT00940000157630.b.b	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.b.a	ENSGT00940000163565	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.a.a	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Murinae	ANCESTRAL SPECIES	2	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.a.a.b	ENSGT00940000157630.a.a.a.a	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00940000161688.f.b.a.b ##11	ENSGT00940000154712.c.a.b.b #16	ENSGT00940000154469.a.a.a.a.a.b #17	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Rat	MODERN SPECIES	15	ENSRNOG00000070363 #7	LOC500584 (ENSRNOG00000063088) #8	ENSRNOG00000070082 #9	Rex2 (ENSRNOG00000062461) #10	ENSRNOG00000063649 #11	ENSRNOG00000070045 #12	ENSRNOG00000068633 #13	RGD1565622 (ENSRNOG00000033792) #14	ENSRNOG00000068760 #15	RGD1565622 (ENSRNOG00000062859) #16	Zfp933 (ENSRNOG00000056374) #17	Miip (ENSRNOG00000024139) #18	Mfn2 (ENSRNOG00000046424) #19	Plod1 (ENSRNOG00000007763) #20	Kiaa2013 (ENSRNOG00000007968) #21	Nppb (ENSRNOG00000008141) #22	Nppa (ENSRNOG00000008176) #23	Clcn6 (ENSRNOG00000008345) #24	Mthfr (ENSRNOG00000008553) #25	Agtrap (ENSRNOG00000008619) #26	Draxin (ENSRNOG00000008911) #27	Rpl35a (ENSRNOG00000031641) #28	Mad2l2 (ENSRNOG00000009134) #29	Fbxo6 (ENSRNOG00000009217) #30	Fbxo44 (ENSRNOG00000009298) #31	Fbxo2 (ENSRNOG00000009409) #32	Disp3 (ENSRNOG00000026447) #33	Ubiad1 (ENSRNOG00000009575) #34	Mtor (ENSRNOG00000009615) #35	Angptl7 (ENSRNOG00000009589) #36	Exosc10 (ENSRNOG00000010719) #37
Mus	ANCESTRAL SPECIES	3	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.a.a.b	ENSGT00940000157630.a.a.a.a	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00940000161688.f.b.a.b ##11	ENSGT00940000154712.c.a.b.b #16	ENSGT00940000154469.a.a.a.a.a.b #17	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Mus_A	ANCESTRAL SPECIES	3	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.a.a.b	ENSGT00940000157630.a.a.a.a	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00940000161688.f.b.a.b ##11	ENSGT00940000154712.c.a.b.b #16	ENSGT00940000154469.a.a.a.a.a.b #17	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Mus_B	ANCESTRAL SPECIES	5	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.a.a.b	ENSGT00940000157630.a.a.a.a	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00940000154712.c.a.b.b.d.a.a.a.a #16	ENSGT00940000154712.c.a.b.b.d.a.a.a.b #16	ENSGT00940000154469.a.a.a.a.a.b #17	ENSGT00390000003768 #18	ENSGT00940000168197	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Mus_C	ANCESTRAL SPECIES	2	ENSGT00940000163565	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.a.a.b	ENSGT00940000157630.a.a.a.a	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00940000154469.a.a.a.a.a.b #17	ENSGT00390000003768 #18	ENSGT00940000168197	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
spretus	MODERN SPECIES	13	Aadacl4fm2 (MGP_SPRETEiJ_G0027766)	MGP_SPRETEiJ_G0027767	Aadacl4fm4 (MGP_SPRETEiJ_G0027768)	AAdacl4fm3 (MGP_SPRETEiJ_G0027769)	Aadacl4fm5 (MGP_SPRETEiJ_G0027770)	Dhrs3 (MGP_SPRETEiJ_G0027771)	Vps13d (MGP_SPRETEiJ_G0027772)	Tnfrsf1b (MGP_SPRETEiJ_G0027773)	Tnfrsf8 (MGP_SPRETEiJ_G0027774)	Zfp933 (MGP_SPRETEiJ_G0027775) #17	Miip (MGP_SPRETEiJ_G0027776) #18	Fv1 (MGP_SPRETEiJ_G0027777)	Mfn2 (MGP_SPRETEiJ_G0027778) #19	Plod1 (MGP_SPRETEiJ_G0027779) #20	2510039O18Rik (MGP_SPRETEiJ_G0027780) #21	Nppb (MGP_SPRETEiJ_G0027781) #22	Nppa (MGP_SPRETEiJ_G0027782) #23	Clcn6 (MGP_SPRETEiJ_G0027783) #24	Mthfr (MGP_SPRETEiJ_G0027784) #25	Agtrap (MGP_SPRETEiJ_G0027785) #26	Draxin (MGP_SPRETEiJ_G0027786) #27	Mad2l2 (MGP_SPRETEiJ_G0027787) #29	Fbxo6 (MGP_SPRETEiJ_G0027788) #30	Fbxo44 (MGP_SPRETEiJ_G0027789) #31	Fbxo2 (MGP_SPRETEiJ_G0027790) #32	Disp3 (MGP_SPRETEiJ_G0027791) #33	Ubiad1 (MGP_SPRETEiJ_G0027792) #34	Mtor (MGP_SPRETEiJ_G0027793) #35	Angptl7 (MGP_SPRETEiJ_G0027794) #36	Exosc10 (MGP_SPRETEiJ_G0027795) #37	Srm (MGP_SPRETEiJ_G0027796)
Steppe mouse	MODERN SPECIES	3147											Zfp933 (ENSMSIG00000010977) #17	Miip (ENSMSIG00000011005) #18	Mfn2 (ENSMSIG00000011070) #19	Plod1 (ENSMSIG00000011130) #20	2510039O18Rik (ENSMSIG00000011176) #21	Nppb (ENSMSIG00000011201) #22	Nppa (ENSMSIG00000011213) #23	Clcn6 (ENSMSIG00000011225) #24	Mthfr (ENSMSIG00000011288) #25	Agtrap (ENSMSIG00000011355) #26	ENSMSIG00000011372	Draxin (ENSMSIG00000011398) #27	Mad2l2 (ENSMSIG00000011418) #29	ENSMSIG00000011464 #31	Fbxo2 (ENSMSIG00000011541) #32	Disp3 (ENSMSIG00000011555) #33	Ubiad1 (ENSMSIG00000011575) #34	Mtor (ENSMSIG00000011592) #35	Angptl7 (ENSMSIG00000011805) #36	Exosc10 (ENSMSIG00000011825) #37	Srm (ENSMSIG00000011893)
Mouse	MODERN SPECIES	13	Rex2 (ENSMUSG00000067919) #16	Zfp991 (ENSMUSG00000067916) #16	Zfp988 (ENSMUSG00000078498) #16	Zfp978 (ENSMUSG00000078497) #16	Zfp982 (ENSMUSG00000078496) ##11	Zfp985 (ENSMUSG00000065999) #16	Zfp979 (ENSMUSG00000066000) #16	Zfp534 (ENSMUSG00000062518) #16	Zfp984 (ENSMUSG00000078495) #16	Zfp933 (ENSMUSG00000059423) #17	Miip (ENSMUSG00000029022) #18	Fv1 (ENSMUSG00000070583)	Mfn2 (ENSMUSG00000029020) #19	Plod1 (ENSMUSG00000019055) #20	2510039O18Rik (ENSMUSG00000044496) #21	Nppb (ENSMUSG00000029019) #22	Nppa (ENSMUSG00000041616) #23	Clcn6 (ENSMUSG00000029016) #24	Mthfr (ENSMUSG00000029009) #25	Agtrap (ENSMUSG00000029007) #26	Draxin (ENSMUSG00000029005) #27	Mad2l2 (ENSMUSG00000029003) #29	Fbxo6 (ENSMUSG00000055401) #30	Fbxo44 (ENSMUSG00000029001) #31	Fbxo2 (ENSMUSG00000041556) #32	Disp3 (ENSMUSG00000041544) #33	Ubiad1 (ENSMUSG00000047719) #34	Mtor (ENSMUSG00000028991) #35	Angptl7 (ENSMUSG00000028989) #36	Exosc10 (ENSMUSG00000017264) #37	Srm (ENSMUSG00000006442)
Ryukyu mouse	MODERN SPECIES	13	Aadacl4fm1 (MGP_CAROLIEiJ_G0026773)	Aadacl4fm2 (MGP_CAROLIEiJ_G0026774)	Aadacl4 (MGP_CAROLIEiJ_G0026775)	Aadacl4fm4 (MGP_CAROLIEiJ_G0026776)	AAdacl4fm3 (MGP_CAROLIEiJ_G0026777)	Aadacl4fm5 (MGP_CAROLIEiJ_G0026778)	Dhrs3 (MGP_CAROLIEiJ_G0026779)	Vps13d (MGP_CAROLIEiJ_G0026780)	Tnfrsf1b (MGP_CAROLIEiJ_G0026781)	Tnfrsf8 (MGP_CAROLIEiJ_G0026782)	MGP_CAROLIEiJ_G0026783 ##17	Miip (MGP_CAROLIEiJ_G0026784) #18	Mfn2 (MGP_CAROLIEiJ_G0026785) #19	Plod1 (MGP_CAROLIEiJ_G0026786) #20	2510039O18Rik (MGP_CAROLIEiJ_G0026787) #21	Nppb (MGP_CAROLIEiJ_G0026788) #22	Nppa (MGP_CAROLIEiJ_G0026789) #23	Clcn6 (MGP_CAROLIEiJ_G0026790) #24	Mthfr (MGP_CAROLIEiJ_G0026791) #25	Agtrap (MGP_CAROLIEiJ_G0026792) #26	Draxin (MGP_CAROLIEiJ_G0026793) #27	MGP_CAROLIEiJ_G0026794 #29	Fbxo6 (MGP_CAROLIEiJ_G0026795) #30	Fbxo44 (MGP_CAROLIEiJ_G0026796) #31	Fbxo2 (MGP_CAROLIEiJ_G0026797) #32	Disp3 (MGP_CAROLIEiJ_G0026798) #33	Ubiad1 (MGP_CAROLIEiJ_G0026799) #34	Mtor (MGP_CAROLIEiJ_G0026800) #35	Angptl7 (MGP_CAROLIEiJ_G0026801) #36	Exosc10 (MGP_CAROLIEiJ_G0026802) #37	Srm (MGP_CAROLIEiJ_G0026803)
Shrew mouse	MODERN SPECIES	19	Aadacl4fm1 (MGP_PahariEiJ_G0029121)	Aadacl4fm2 (MGP_PahariEiJ_G0029122)	Aadacl4 (MGP_PahariEiJ_G0029123)	Aadacl4fm4 (MGP_PahariEiJ_G0029124)	AAdacl4fm3 (MGP_PahariEiJ_G0029125)	Aadacl4fm5 (MGP_PahariEiJ_G0029126)	Dhrs3 (MGP_PahariEiJ_G0029127)	Vps13d (MGP_PahariEiJ_G0029128)	Tnfrsf1b (MGP_PahariEiJ_G0029129)	Tnfrsf8 (MGP_PahariEiJ_G0029130)	MGP_PahariEiJ_G0029131 ##17	Miip (MGP_PahariEiJ_G0029132) #18	Mfn2 (MGP_PahariEiJ_G0029133) #19	Plod1 (MGP_PahariEiJ_G0029134) #20	2510039O18Rik (MGP_PahariEiJ_G0029135) #21	Nppb (MGP_PahariEiJ_G0029136) #22	Nppa (MGP_PahariEiJ_G0029137) #23	Clcn6 (MGP_PahariEiJ_G0029138) #24	Mthfr (MGP_PahariEiJ_G0029139) #25	Agtrap (MGP_PahariEiJ_G0029140) #26	Draxin (MGP_PahariEiJ_G0029141) #27	Mad2l2 (MGP_PahariEiJ_G0029142) #29	Fbxo6 (MGP_PahariEiJ_G0029143) #30	MGP_PahariEiJ_G0029144 #31	Fbxo2 (MGP_PahariEiJ_G0029145) #32	Disp3 (MGP_PahariEiJ_G0029146) #33	Ubiad1 (MGP_PahariEiJ_G0029147) #34	Mtor (MGP_PahariEiJ_G0029148) #35	Angptl7 (MGP_PahariEiJ_G0029149) #36	Exosc10 (MGP_PahariEiJ_G0029150) #37	Srm (MGP_PahariEiJ_G0029151)
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.b.a	ENSGT00940000163565	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.a.a	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Cricetinae	ANCESTRAL SPECIES	5	ENSGT01030000234531.A.b.b.b.e.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.b.a	ENSGT00940000157630.b.b	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Chinese hamster chok1gshd	MODERN SPECIES	111	Cfap107 (ENSCGRG00001025039)	Aadacl3 (ENSCGRG00001024964)	Aadacl4fm1 (ENSCGRG00001024757)	ENSCGRG00001024601	Aadacl4 (ENSCGRG00001021022)	Aadacl4fm4 (ENSCGRG00001018913)	Dhrs3 (ENSCGRG00001012549)	Vps13d (ENSCGRG00001023868)	Tnfrsf1b (ENSCGRG00001006800)	Tnfrsf8 (ENSCGRG00001020934)	Miip (ENSCGRG00001007967) #18	Mfn2 (ENSCGRG00001012340) #19	Plod1 (ENSCGRG00001021872) #20	2510039O18Rik (ENSCGRG00001020171) #21	ENSCGRG00001019462	Nppb (ENSCGRG00001019165) #22	Nppa (ENSCGRG00001002441) #23	Clcn6 (ENSCGRG00001020204) #24	Mthfr (ENSCGRG00001015921) #25	Agtrap (ENSCGRG00001010884) #26	Draxin (ENSCGRG00001002528) #27	Mad2l2 (ENSCGRG00001023601) #29	Fbxo6 (ENSCGRG00001023002) #30	Fbxo44 (ENSCGRG00001025034) #31	Fbxo2 (ENSCGRG00001024819) #32	Disp3 (ENSCGRG00001017925) #33	Ubiad1 (ENSCGRG00001017029) #34	Angptl7 (ENSCGRG00001011013) #36	Mtor (ENSCGRG00001002776) #35	Exosc10 (ENSCGRG00001018469) #37	Srm (ENSCGRG00001014410)
Golden Hamster	MODERN SPECIES	707	Cfap107 (ENSMAUG00000002284)	Aadacl3 (ENSMAUG00000008443)	Aadacl4fm1 (ENSMAUG00000022135)	ENSMAUG00000011542	Aadacl4fm4 (ENSMAUG00000008456)	ENSMAUG00000001063	ENSMAUG00000022203	Dhrs3 (ENSMAUG00000014881)	Vps13d (ENSMAUG00000003081)	Tnfrsf1b (ENSMAUG00000009639)	Tnfrsf8 (ENSMAUG00000009810)	Miip (ENSMAUG00000020135) #18	Mfn2 (ENSMAUG00000008664) #19	Plod1 (ENSMAUG00000021152) #20	2510039O18Rik (ENSMAUG00000021494) #21	Nppb (ENSMAUG00000020459) #22	Nppa (ENSMAUG00000010723) #23	Clcn6 (ENSMAUG00000018198) #24	Mthfr (ENSMAUG00000009132) #25	Agtrap (ENSMAUG00000020679) #26	Draxin (ENSMAUG00000020626) #27	Mad2l2 (ENSMAUG00000020093) #29	Fbxo6 (ENSMAUG00000007924) #30	Fbxo44 (ENSMAUG00000020389) #31	Fbxo2 (ENSMAUG00000018402) #32	Disp3 (ENSMAUG00000021137) #33	Ubiad1 (ENSMAUG00000021900) #34	Angptl7 (ENSMAUG00000008434) #36	Mtor (ENSMAUG00000015520) #35	Exosc10 (ENSMAUG00000019261) #37	Srm (ENSMAUG00000005303)
Cricetidae_B	ANCESTRAL SPECIES	30	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.b.a	ENSGT00940000163565	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.a.a	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Prairie vole	MODERN SPECIES	1	Aadacl3 (ENSMOCG00000019587)	ENSMOCG00000001628	Aadacl4fm1 (ENSMOCG00000018268)	ENSMOCG00000020825	Aadacl4 (ENSMOCG00000004268)	Aadacl4fm4 (ENSMOCG00000019793)	ENSMOCG00000017314	Dhrs3 (ENSMOCG00000015852)	Vps13d (ENSMOCG00000021798)	Tnfrsf1b (ENSMOCG00000011772)	Tnfrsf8 (ENSMOCG00000013428)	Miip (ENSMOCG00000012534) #18	Mfn2 (ENSMOCG00000018675) #19	Plod1 (ENSMOCG00000012299) #20	2510039O18Rik (ENSMOCG00000016570) #21	Nppb (ENSMOCG00000008405) #22	Nppa (ENSMOCG00000001019) #23	Clcn6 (ENSMOCG00000012565) #24	Mthfr (ENSMOCG00000019463) #25	Agtrap (ENSMOCG00000019967) #26	Draxin (ENSMOCG00000011466) #27	Mad2l2 (ENSMOCG00000002384) #29	Fbxo6 (ENSMOCG00000015460) #30	Fbxo44 (ENSMOCG00000013706) #31	Fbxo2 (ENSMOCG00000009707) #32	Disp3 (ENSMOCG00000006269) #33	Ubiad1 (ENSMOCG00000005693) #34	Angptl7 (ENSMOCG00000006554) #36	Mtor (ENSMOCG00000009089) #35	Exosc10 (ENSMOCG00000016509) #37	Srm (ENSMOCG00000020611)
Northern American deer mouse	MODERN SPECIES	11	Aadacl3 (ENSPEMG00000019428)	Aadacl4fm1 (ENSPEMG00000019444)	Aadacl4fm2 (ENSPEMG00000019508)	Aadacl4 (ENSPEMG00000019539)	Aadacl4fm4 (ENSPEMG00000019566)	ENSPEMG00000019585	ENSPEMG00000029073	Dhrs3 (ENSPEMG00000019609)	Vps13d (ENSPEMG00000019865)	Tnfrsf1b (ENSPEMG00000019981)	Tnfrsf8 (ENSPEMG00000020050)	Miip (ENSPEMG00000020072) #18	Mfn2 (ENSPEMG00000020166) #19	Plod1 (ENSPEMG00000000181) #20	2510039O18Rik (ENSPEMG00000020159) #21	Nppb (ENSPEMG00000020191) #22	Nppa (ENSPEMG00000020200) #23	Clcn6 (ENSPEMG00000000154) #24	Mthfr (ENSPEMG00000007639) #25	Agtrap (ENSPEMG00000008422) #26	Draxin (ENSPEMG00000008971) #27	Mad2l2 (ENSPEMG00000009876) #29	Fbxo6 (ENSPEMG00000010206) #30	Fbxo44 (ENSPEMG00000010664) #31	Fbxo2 (ENSPEMG00000011586) #32	Disp3 (ENSPEMG00000001917) #33	Ubiad1 (ENSPEMG00000027609) #34	Angptl7 (ENSPEMG00000016277) #36	Mtor (ENSPEMG00000013439) #35	Exosc10 (ENSPEMG00000007753) #37	Masp2 (ENSPEMG00000017820)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1508					ENSNGAG00000023452	ENSNGAG00000011491	Dhrs3 (ENSNGAG00000014336)	Vps13d (ENSNGAG00000009848)	Tnfrsf1b (ENSNGAG00000020592)	Tnfrsf8 (ENSNGAG00000019763)	Miip (ENSNGAG00000016536) #18	Mfn2 (ENSNGAG00000014552) #19	ENSNGAG00000008701 #20	ENSNGAG00000000418 #20	2510039O18Rik (ENSNGAG00000009009) #21	ENSNGAG00000001304 #22	Nppa (ENSNGAG00000000398) #23	Clcn6 (ENSNGAG00000009782) #24	Mthfr (ENSNGAG00000019269) #25	Agtrap (ENSNGAG00000010052) #26
Rodentia_A	ANCESTRAL SPECIES		ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.f	ENSGT01030000234531.A.b.b.b.e.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.f.b.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Marmotini	ANCESTRAL SPECIES		ENSGT00940000154570.a.b	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.c	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Marmotini_b	ANCESTRAL SPECIES		ENSGT00940000154570.a.b	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.c	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000017402 #26	ENSGT00390000013828 #27	ENSGT00940000153395.b #29	ENSGT00940000159980 #30	ENSGT00940000159408 #31	ENSGT00940000160929 #32	ENSGT00940000157931 #33	ENSGT00390000012439 #34	ENSGT00930000151037 #35	ENSGT00940000157064.a.a #36	ENSGT00390000015408 #37	ENSGT00870000136521
Arctic ground squirrel	MODERN SPECIES	192				ENSUPAG00010004689	AADACL3 (ENSUPAG00010004684)	ENSUPAG00010004670	ENSUPAG00010004669	DHRS3 (ENSUPAG00010004636)	VPS13D (ENSUPAG00010003922)	TNFRSF1B (ENSUPAG00010003884)	TNFRSF8 (ENSUPAG00010003869)	MIIP (ENSUPAG00010003861) #18	MFN2 (ENSUPAG00010003824) #19	PLOD1 (ENSUPAG00010003800) #20	KIAA2013 (ENSUPAG00010003792) #21	ENSUPAG00010003781 #22	NPPA (ENSUPAG00010003768) #23	CLCN6 (ENSUPAG00010003705) #24	MTHFR (ENSUPAG00010003678) #25	ENSUPAG00010003642	DRAXIN (ENSUPAG00010003632) #27	MAD2L2 (ENSUPAG00010003610) #29	FBXO6 (ENSUPAG00010003574) #30	FBXO2 (ENSUPAG00010003569) #32	DISP3 (ENSUPAG00010003537) #33	UBIAD1 (ENSUPAG00010003527) #34	ANGPTL7 (ENSUPAG00010003518) #36	MTOR (ENSUPAG00010003456) #35	EXOSC10 (ENSUPAG00010003379) #37	SRM (ENSUPAG00010003367)	MASP2 (ENSUPAG00010003336)
Squirrel	MODERN SPECIES	74	ENSSTOG00000030433	ENSSTOG00000023112	PRDM2 (ENSSTOG00000019848)	PDPN (ENSSTOG00000032629)	LRRC38 (ENSSTOG00000023111)	CFAP107 (ENSSTOG00000009816)	AADACL3 (ENSSTOG00000007059)	AADACL4 (ENSSTOG00000019534)	DHRS3 (ENSSTOG00000016015)	VPS13D (ENSSTOG00000005519)	TNFRSF1B (ENSSTOG00000024605)	MIIP (ENSSTOG00000024734) #18	MFN2 (ENSSTOG00000005705) #19	PLOD1 (ENSSTOG00000009927) #20	KIAA2013 (ENSSTOG00000027586) #21	NPPB (ENSSTOG00000020778) #22	ENSSTOG00000007663 #23	CLCN6 (ENSSTOG00000007614) #24	MTHFR (ENSSTOG00000007591) #25	AGTRAP (ENSSTOG00000030212) #26	DRAXIN (ENSSTOG00000001281) #27	MAD2L2 (ENSSTOG00000009961) #29	FBXO6 (ENSSTOG00000009949) #30	FBXO44 (ENSSTOG00000009941) #31	FBXO2 (ENSSTOG00000025486) #32	DISP3 (ENSSTOG00000009265) #33	UBIAD1 (ENSSTOG00000022240) #34	ANGPTL7 (ENSSTOG00000005589) #36	MTOR (ENSSTOG00000005494) #35	EXOSC10 (ENSSTOG00000005459) #37	SRM (ENSSTOG00000024798)
Alpin marmot	MODERN SPECIES	73							CFAP107 (ENSMMMG00000016358)	AADACL3 (ENSMMMG00000016361)	AADACL4 (ENSMMMG00000016366)	DHRS3 (ENSMMMG00000016372)	VPS13D (ENSMMMG00000016395)	TNFRSF1B (ENSMMMG00000016525)	TNFRSF8 (ENSMMMG00000016534)	MFN2 (ENSMMMG00000016567) #19	PLOD1 (ENSMMMG00000016602) #20	ENSMMMG00000016621 #22	NPPA (ENSMMMG00000016626) #23	CLCN6 (ENSMMMG00000016637) #24	MTHFR (ENSMMMG00000016671) #25	AGTRAP (ENSMMMG00000016693) #26	DRAXIN (ENSMMMG00000016699) #27	MAD2L2 (ENSMMMG00000016711) #29	FBXO6 (ENSMMMG00000016731) #30	FBXO44 (ENSMMMG00000016734) #31	FBXO2 (ENSMMMG00000016755) #32	DISP3 (ENSMMMG00000016764) #33	UBIAD1 (ENSMMMG00000016787) #34	MTOR (ENSMMMG00000016791) #35	ANGPTL7 (ENSMMMG00000016833) #36	EXOSC10 (ENSMMMG00000016839) #37	MASP2 (ENSMMMG00000016862)
Eurasian red squirrel	MODERN SPECIES		LRRC38 (ENSSVLG00005008488)	ENSSVLG00005008079	CFAP107 (ENSSVLG00005007956)	AADACL3 (ENSSVLG00005007922)	ENSSVLG00005007846	ENSSVLG00005007795	DHRS3 (ENSSVLG00005007738)	VPS13D (ENSSVLG00005007158)	TNFRSF1B (ENSSVLG00005006983)	ENSSVLG00005006934	TNFRSF8 (ENSSVLG00005006831)	MIIP (ENSSVLG00005006797) #18	MFN2 (ENSSVLG00005006764) #19	PLOD1 (ENSSVLG00005006729) #20	KIAA2013 (ENSSVLG00005006695) #21	NPPB (ENSSVLG00005006653) #22	NPPA (ENSSVLG00005006599) #23	CLCN6 (ENSSVLG00005006533) #24	MTHFR (ENSSVLG00005006411) #25	AGTRAP (ENSSVLG00005006342) #26	DRAXIN (ENSSVLG00005006297) #27	MAD2L2 (ENSSVLG00005006268) #29	FBXO6 (ENSSVLG00005006238) #30	FBXO44 (ENSSVLG00005006188) #31	FBXO2 (ENSSVLG00005006137) #32	DISP3 (ENSSVLG00005006030) #33	UBIAD1 (ENSSVLG00005005985) #34	ANGPTL7 (ENSSVLG00005005951) #36	ENSSVLG00005005854 #35	EXOSC10 (ENSSVLG00005005780) #37	SRM (ENSSVLG00005005741)
Lagomorpha	ANCESTRAL SPECIES	140	ENSGT00940000159410	ENSGT00390000000013	ENSGT00940000162571	ENSGT01030000234531.A.b.b.b.c	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724	ENSGT00950000183083.b	ENSGT00940000161800	ENSGT00510000049215	ENSGT00390000003768 #18	ENSGT00390000013727.c #19	ENSGT01030000234558.A.a.a.b #20	ENSGT00390000007643 #21	ENSGT00940000154513.A #22	ENSGT00940000154513.B #23	ENSGT00940000159291 #24	ENSGT00390000012490 #25	ENSGT00390000000617	ENSGT00390000017402 #26	ENSGT00390000013828 #27
Rabbit	MODERN SPECIES	472	ENSOCUG00000030212	PDPN (ENSOCUG00000005899)	LRRC38 (ENSOCUG00000010759)	ENSOCUG00000008348	CFAP107 (ENSOCUG00000007517)	AADACL3 (ENSOCUG00000025025)	ENSOCUG00000026490	ENSOCUG00000003422	ENSOCUG00000029199	VPS13D (ENSOCUG00000005551)	TNFRSF1B (ENSOCUG00000014127)	TNFRSF8 (ENSOCUG00000015925)	ENSOCUG00000003525 #18	MFN2 (ENSOCUG00000007972) #19	PLOD1 (ENSOCUG00000007960) #20	ENSOCUG00000027131 #22	NPPA (ENSOCUG00000007311) #23	CLCN6 (ENSOCUG00000007298) #24	MTHFR (ENSOCUG00000007291) #25	ENSOCUG00000007278	AGTRAP (ENSOCUG00000003803) #26	DRAXIN (ENSOCUG00000005549) #27