Glires ANCESTRAL SPECIES 8 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT01060000253534 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d Rodentia ANCESTRAL SPECIES 21 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT01060000253534 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d Rodentia_B ANCESTRAL SPECIES 24 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00410000029064 ENSGT00390000011749 #26 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT01060000253534 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d Myomorpha ANCESTRAL SPECIES 29 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00410000029064 ENSGT00390000011749 #26 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT01060000253534 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d Lesser Egyptian jerboa MODERN SPECIES 138 Cldn23 (ENSJJAG00000013088) #7 Gm19410 (ENSJJAG00000001787) #8 Mfhas1 (ENSJJAG00000015209) #9 Eri1 (ENSJJAG00000015740) #10 Ppp1r3b (ENSJJAG00000012925) #11 ENSJJAG00000022750 #12 ENSJJAG00000000167 #13 Tnks (ENSJJAG00000010315) #14 Dusp4 (ENSJJAG00000015845) #15 ENSJJAG00000013189 #16 ENSJJAG00000016531 #17 ENSJJAG00000016758 #18 Saraf (ENSJJAG00000017570) #19 ENSJJAG00000018340 #20 Mboat4 (ENSJJAG00000019709) #21 Dctn6 (ENSJJAG00000009554) #22 ENSJJAG00000010922 #23 ENSJJAG00000011948 #24 Rbpms (ENSJJAG00000014024) #25 Gtf2e2 (ENSJJAG00000016660) #26 Gsr (ENSJJAG00000018464) #27 Ubxn8 (ENSJJAG00000011389) #28 ENSJJAG00000012013 #29 ENSJJAG00000012832 #30 Tex15 (ENSJJAG00000013617) #31 Purg (ENSJJAG00000013136) #32 Wrn (ENSJJAG00000015655) #33 ENSJJAG00000018862 #34 Muroidea ANCESTRAL SPECIES 26 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00410000029064 ENSGT00390000011749 #26 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT01060000253534 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d Muroidea_A ANCESTRAL SPECIES 26 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00410000029064 ENSGT00390000011749 #26 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT01060000253534 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d Cricetidae ANCESTRAL SPECIES 23 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d ENSGT00940000158107 Cricetinae ANCESTRAL SPECIES 25 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d ENSGT00940000158107 Golden Hamster MODERN SPECIES 624 ENSMAUG00000002793 Sgcz (ENSMAUG00000019739) Dlc1 (ENSMAUG00000017179) Trmt9b (ENSMAUG00000017514) Lonrf1 (ENSMAUG00000019267) Prag1 (ENSMAUG00000011341) Cldn23 (ENSMAUG00000008935) #7 Gm19410 (ENSMAUG00000012977) #8 Eri1 (ENSMAUG00000006186) #10 Ppp1r3b (ENSMAUG00000008079) #11 Tnks (ENSMAUG00000007100) #14 Dusp4 (ENSMAUG00000018224) #15 Saraf (ENSMAUG00000007950) #19 Leprotl1 (ENSMAUG00000011224) #20 Mboat4 (ENSMAUG00000015561) #21 Dctn6 (ENSMAUG00000008454) #22 ENSMAUG00000019334 Rbpms (ENSMAUG00000018892) #25 Smim18 (ENSMAUG00000012861) Gtf2e2 (ENSMAUG00000003938) #26 Gsr (ENSMAUG00000013110) #27 Ubxn8 (ENSMAUG00000013271) #28 ENSMAUG00000018928 #29 Tex15 (ENSMAUG00000013992) #31 Purg (ENSMAUG00000010214) #32 Wrn (ENSMAUG00000016235) #33 Nrg1 (ENSMAUG00000022160) #34 Fut10 (ENSMAUG00000021420) Mak16 (ENSMAUG00000008496) Tti2 (ENSMAUG00000016364) Rnf122 (ENSMAUG00000009969) Chinese hamster chok1gshd MODERN SPECIES 1 Lonrf1 (ENSCGRG00001020250) ENSCGRG00001005461 Prag1 (ENSCGRG00001023518) Cldn23 (ENSCGRG00001006104) #7 Gm19410 (ENSCGRG00001024429) #8 ENSCGRG00001016163 #9 Eri1 (ENSCGRG00001017852) #10 Ppp1r3b (ENSCGRG00001005666) #11 Tnks (ENSCGRG00001020318) #14 Dusp4 (ENSCGRG00001022778) #15 ENSCGRG00001007762 ENSCGRG00001005245 Saraf (ENSCGRG00001024847) #19 Leprotl1 (ENSCGRG00001000543) #20 Mboat4 (ENSCGRG00001015723) #21 Dctn6 (ENSCGRG00001001182) #22 Rbpms (ENSCGRG00001002814) #25 Gtf2e2 (ENSCGRG00001004129) #26 Smim18 (ENSCGRG00001006260) Gsr (ENSCGRG00001023740) #27 Ubxn8 (ENSCGRG00001024281) #28 Ppp2cb (ENSCGRG00001024500) #29 Tex15 (ENSCGRG00001014732) #31 Purg (ENSCGRG00001015485) #32 Wrn (ENSCGRG00001016491) #33 ENSCGRG00001022694 Nrg1 (ENSCGRG00001024689) #34 ENSCGRG00001014339 Fut10 (ENSCGRG00001014936) Mak16 (ENSCGRG00001016542) Tti2 (ENSCGRG00001014541) Cricetidae_B ANCESTRAL SPECIES 17 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d ENSGT00940000158107 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 5 ENSPEMG00000025165 Foxa1 (ENSPEMG00000014429) Ttc6 (ENSPEMG00000012398) Sstr1 (ENSPEMG00000027830) Clec14a (ENSPEMG00000008142) ENSPEMG00000001174 ENSPEMG00000024797 ENSPEMG00000010494 Gemin2 (ENSPEMG00000008079) Trappc6b (ENSPEMG00000031181) Pnn (ENSPEMG00000020349) Mia2 (ENSPEMG00000009691) Fbxo33 (ENSPEMG00000007070) ENSPEMG00000031398 ENSPEMG00000031040 ENSPEMG00000013551 #22 Lrfn5 (ENSPEMG00000022367) ENSPEMG00000026831 ENSPEMG00000029446 ENSPEMG00000015129 Frmd6 (ENSPEMG00000020767) Tmx1 (ENSPEMG00000020440) Trim9 (ENSPEMG00000021633) Pygl (ENSPEMG00000022037) Abhd12b (ENSPEMG00000020611) Nin (ENSPEMG00000020865) Sav1 (ENSPEMG00000022702) Atl1 (ENSPEMG00000022136) Map4k5 (ENSPEMG00000016155) Cdkl1 (ENSPEMG00000011830) Dmac2l (ENSPEMG00000020580) Northern American deer mouse MODERN SPECIES 8 Dlc1 (ENSPEMG00000018237) ENSPEMG00000025702 Trmt9b (ENSPEMG00000021287) Lonrf1 (ENSPEMG00000024160) Prag1 (ENSPEMG00000022666) Cldn23 (ENSPEMG00000001401) #7 Gm19410 (ENSPEMG00000021928) #8 Mfhas1 (ENSPEMG00000020822) #9 Eri1 (ENSPEMG00000027473) #10 Ppp1r3b (ENSPEMG00000025580) #11 Tnks (ENSPEMG00000015511) #14 Dusp4 (ENSPEMG00000025997) #15 Saraf (ENSPEMG00000000797) #19 Leprotl1 (ENSPEMG00000000535) #20 Mboat4 (ENSPEMG00000020959) #21 ENSPEMG00000021943 #22 Rbpms (ENSPEMG00000021130) #25 Gtf2e2 (ENSPEMG00000010946) #26 Smim18 (ENSPEMG00000028343) Gsr (ENSPEMG00000016504) #27 Ubxn8 (ENSPEMG00000020593) #28 Ppp2cb (ENSPEMG00000023087) #29 Tex15 (ENSPEMG00000026734) #31 ENSPEMG00000013191 Purg (ENSPEMG00000021091) #32 Wrn (ENSPEMG00000020615) #33 Nrg1 (ENSPEMG00000022891) #34 ENSPEMG00000022149 Fut10 (ENSPEMG00000008967) Mak16 (ENSPEMG00000015171) Tti2 (ENSPEMG00000015846) Prairie vole MODERN SPECIES 356 Sgcz (ENSMOCG00000009551) Dlc1 (ENSMOCG00000001472) Trmt9b (ENSMOCG00000013997) Lonrf1 (ENSMOCG00000010882) Prag1 (ENSMOCG00000004666) Cldn23 (ENSMOCG00000009754) #7 Gm19410 (ENSMOCG00000017706) #8 Mfhas1 (ENSMOCG00000011084) #9 Eri1 (ENSMOCG00000003319) #10 Ppp1r3b (ENSMOCG00000014062) #11 Tnks (ENSMOCG00000022402) #14 Dusp4 (ENSMOCG00000017211) #15 Saraf (ENSMOCG00000016723) #19 Leprotl1 (ENSMOCG00000002171) #20 Mboat4 (ENSMOCG00000021461) #21 Dctn6 (ENSMOCG00000018050) #22 Rbpms (ENSMOCG00000014009) #25 Smim18 (ENSMOCG00000000211) Gtf2e2 (ENSMOCG00000018396) #26 Gsr (ENSMOCG00000010491) #27 Ubxn8 (ENSMOCG00000003103) #28 ENSMOCG00000022950 #29 Tex15 (ENSMOCG00000020732) #31 Purg (ENSMOCG00000008083) #32 Wrn (ENSMOCG00000013972) #33 Nrg1 (ENSMOCG00000014264) #34 Fut10 (ENSMOCG00000016849) Mak16 (ENSMOCG00000007445) Tti2 (ENSMOCG00000005440) Rnf122 (ENSMOCG00000001095) Dusp26 (ENSMOCG00000021310) Murinae ANCESTRAL SPECIES 23 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00410000029064 ENSGT00390000011749 #26 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT01060000253534 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d Mus ANCESTRAL SPECIES 6 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00410000029064 ENSGT00390000011749 #26 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00900000143366 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT01060000253534 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 Shrew mouse MODERN SPECIES 10 AI429214 (MGP_PahariEiJ_G0021455) Dlc1 (MGP_PahariEiJ_G0021454) Trmt9b (MGP_PahariEiJ_G0021453) Lonrf1 (MGP_PahariEiJ_G0021452) Prag1 (MGP_PahariEiJ_G0021451) Cldn23 (MGP_PahariEiJ_G0021450) #7 Gm19410 (MGP_PahariEiJ_G0021449) #8 Mfhas1 (MGP_PahariEiJ_G0021448) #9 Eri1 (MGP_PahariEiJ_G0021447) #10 Ppp1r3b (MGP_PahariEiJ_G0021446) #11 Tnks (MGP_PahariEiJ_G0021445) #14 Dusp4 (MGP_PahariEiJ_G0021444) #15 Saraf (MGP_PahariEiJ_G0021443) #19 Leprotl1 (MGP_PahariEiJ_G0021442) #20 Mboat4 (MGP_PahariEiJ_G0021441) #21 Dctn6 (MGP_PahariEiJ_G0021440) #22 Rbpms (MGP_PahariEiJ_G0021439) #25 Smim18 (MGP_PahariEiJ_G0021438) Gtf2e2 (MGP_PahariEiJ_G0021437) #26 Gsr (MGP_PahariEiJ_G0021436) #27 Ubxn8 (MGP_PahariEiJ_G0021435) #28 Ppp2cb (MGP_PahariEiJ_G0021434) #29 MGP_PahariEiJ_G0021433 #31 MGP_PahariEiJ_G0021432 Purg (MGP_PahariEiJ_G0021431) #32 Wrn (MGP_PahariEiJ_G0021430) #33 MGP_PahariEiJ_G0021429 #34 MGP_PahariEiJ_G0021428 #34 Fut10 (MGP_PahariEiJ_G0021427) Mak16 (MGP_PahariEiJ_G0021426) Tti2 (MGP_PahariEiJ_G0021425) Mus_A ANCESTRAL SPECIES 8 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00410000029064 ENSGT00390000011749 #26 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00900000143366 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT01060000253534 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 Ryukyu mouse MODERN SPECIES 17 Dlc1 (MGP_CAROLIEiJ_G0030986) Trmt9b (MGP_CAROLIEiJ_G0030985) Lonrf1 (MGP_CAROLIEiJ_G0030984) Prag1 (MGP_CAROLIEiJ_G0030983) Cldn23 (MGP_CAROLIEiJ_G0030982) #7 Gm19410 (MGP_CAROLIEiJ_G0030981) #8 Mfhas1 (MGP_CAROLIEiJ_G0030980) #9 Eri1 (MGP_CAROLIEiJ_G0030979) #10 Ppp1r3b (MGP_CAROLIEiJ_G0030978) #11 Tnks (MGP_CAROLIEiJ_G0030977) #14 Dusp4 (MGP_CAROLIEiJ_G0030976) #15 MGP_CAROLIEiJ_G0030975 Saraf (MGP_CAROLIEiJ_G0030974) #19 Leprotl1 (MGP_CAROLIEiJ_G0030973) #20 Mboat4 (MGP_CAROLIEiJ_G0030972) #21 Dctn6 (MGP_CAROLIEiJ_G0030971) #22 Rbpms (MGP_CAROLIEiJ_G0030970) #25 Smim18 (MGP_CAROLIEiJ_G0030969) Gtf2e2 (MGP_CAROLIEiJ_G0030968) #26 Gsr (MGP_CAROLIEiJ_G0030967) #27 Ubxn8 (MGP_CAROLIEiJ_G0030966) #28 Ppp2cb (MGP_CAROLIEiJ_G0030965) #29 Tex15 (MGP_CAROLIEiJ_G0030964) #31 MGP_CAROLIEiJ_G0030963 Purg (MGP_CAROLIEiJ_G0030962) #32 Wrn (MGP_CAROLIEiJ_G0030961) #33 MGP_CAROLIEiJ_G0030960 #34 MGP_CAROLIEiJ_G0030959 #34 Fut10 (MGP_CAROLIEiJ_G0030958) Mak16 (MGP_CAROLIEiJ_G0030957) Tti2 (MGP_CAROLIEiJ_G0030956) Mus_B ANCESTRAL SPECIES 6 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00410000029064 ENSGT00390000011749 #26 ENSGT00940000156986 #27 ENSGT00390000018326.b #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT01060000253534 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d Mouse MODERN SPECIES 17 Dlc1 (ENSMUSG00000031523) Trmt9b (ENSMUSG00000039620) Lonrf1 (ENSMUSG00000039633) Prag1 (ENSMUSG00000050271) Cldn23 (ENSMUSG00000055976) #7 Gm19410 (ENSMUSG00000109372) #8 Mfhas1 (ENSMUSG00000070056) #9 Eri1 (ENSMUSG00000031527) #10 Ppp1r3b (ENSMUSG00000046794) #11 Tnks (ENSMUSG00000031529) #14 Dusp4 (ENSMUSG00000031530) #15 Saraf (ENSMUSG00000031532) #19 Leprotl1 (ENSMUSG00000031513) #20 Mboat4 (ENSMUSG00000071113) #21 Gm10131 (ENSMUSG00000063412) Dctn6 (ENSMUSG00000031516) #22 Rbpms (ENSMUSG00000031586) #25 Smim18 (ENSMUSG00000094500) Gtf2e2 (ENSMUSG00000031585) #26 Gsr (ENSMUSG00000031584) #27 Ubxn8 (ENSMUSG00000052906) #28 Ppp2cb (ENSMUSG00000009630) #29 Tex15 (ENSMUSG00000009628) #31 Purg (ENSMUSG00000049184) #32 Wrn (ENSMUSG00000031583) #33 Nrg1 (ENSMUSG00000118541) Nrg1 (ENSMUSG00000062991) #34 Fut10 (ENSMUSG00000046152) Mak16 (ENSMUSG00000031578) Tti2 (ENSMUSG00000031577) Rnf122 (ENSMUSG00000039328) Mus_C ANCESTRAL SPECIES 5 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000156986 #27 ENSGT00390000018326.b #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d ENSGT00940000158107 Steppe mouse MODERN SPECIES 767 ENSMSIG00000002475 #22 spretus MODERN SPECIES 17 AI429214 (MGP_SPRETEiJ_G0032103) Dlc1 (MGP_SPRETEiJ_G0032102) Trmt9b (MGP_SPRETEiJ_G0032101) Lonrf1 (MGP_SPRETEiJ_G0032100) Prag1 (MGP_SPRETEiJ_G0032099) Cldn23 (MGP_SPRETEiJ_G0032098) #7 Gm19410 (MGP_SPRETEiJ_G0032097) #8 Mfhas1 (MGP_SPRETEiJ_G0032096) #9 Eri1 (MGP_SPRETEiJ_G0032095) #10 Ppp1r3b (MGP_SPRETEiJ_G0032094) #11 Tnks (MGP_SPRETEiJ_G0032093) #14 Dusp4 (MGP_SPRETEiJ_G0032092) #15 MGP_SPRETEiJ_G0032091 #19 Leprotl1 (MGP_SPRETEiJ_G0032090) #20 Mboat4 (MGP_SPRETEiJ_G0032089) #21 Dctn6 (MGP_SPRETEiJ_G0032088) #22 Rbpms (MGP_SPRETEiJ_G0032087) #25 Smim18 (MGP_SPRETEiJ_G0032086) Gtf2e2 (MGP_SPRETEiJ_G0032085) #26 Gsr (MGP_SPRETEiJ_G0032084) #27 Ubxn8 (MGP_SPRETEiJ_G0032083) #28 Ppp2cb (MGP_SPRETEiJ_G0032082) #29 Tex15 (MGP_SPRETEiJ_G0032081) #31 Purg (MGP_SPRETEiJ_G0032080) #32 Wrn (MGP_SPRETEiJ_G0032079) #33 MGP_SPRETEiJ_G0032078 #34 MGP_SPRETEiJ_G0032077 #34 Fut10 (MGP_SPRETEiJ_G0032076) Mak16 (MGP_SPRETEiJ_G0032075) Tti2 (MGP_SPRETEiJ_G0032074) Rnf122 (MGP_SPRETEiJ_G0032073) Rat MODERN SPECIES 7 Trmt9b (ENSRNOG00000011253) ENSRNOG00000066954 Lonrf1 (ENSRNOG00000053706) Prag1 (ENSRNOG00000011407) Cldn23 (ENSRNOG00000011424) #7 LOC100910088 (ENSRNOG00000054809) #8 Mfhas1 (ENSRNOG00000011431) #9 Eri1 (ENSRNOG00000011448) #10 Ppp1r3b (ENSRNOG00000011474) #11 Tnks (ENSRNOG00000011625) #14 Dusp4 (ENSRNOG00000011921) #15 AABR07026048.1 (ENSRNOG00000031879) Saraf (ENSRNOG00000012329) #19 Leprotl1 (ENSRNOG00000012601) #20 Mboat4 (ENSRNOG00000030102) #21 Dctn6 (ENSRNOG00000013254) #22 LOC100364509 (ENSRNOG00000050067) AABR07026059.1 (ENSRNOG00000031959) Rbpms (ENSRNOG00000013328) #25 Gtf2e2 (ENSRNOG00000014422) #26 Smim18 (ENSRNOG00000049689) ENSRNOG00000070491 Gsr (ENSRNOG00000014915) #27 Ubxn8 (ENSRNOG00000015109) #28 Ppp2cb (ENSRNOG00000015182) #29 Tex15 (ENSRNOG00000007748) #31 Purg (ENSRNOG00000015426) #32 Wrn (ENSRNOG00000015440) #33 Nrg1 (ENSRNOG00000010392) #34 ENSRNOG00000070947 Fut10 (ENSRNOG00000050857) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 792 Tnks (ENSNGAG00000000489) #14 Dusp4 (ENSNGAG00000000194) #15 Saraf (ENSNGAG00000006407) #19 Leprotl1 (ENSNGAG00000004995) #20 Mboat4 (ENSNGAG00000004226) #21 ENSNGAG00000002881 #22 Upper Galilee mountains blind mole rat MODERN SPECIES 1795 Cdc42bpa (ENSNGAG00000016580) ENSNGAG00000015462 Coq8a (ENSNGAG00000022006) Psen2 (ENSNGAG00000023668) ENSNGAG00000004558 Itpkb (ENSNGAG00000006387) Stum (ENSNGAG00000007799) Parp1 (ENSNGAG00000003885) Lin9 (ENSNGAG00000010078) Mixl1 (ENSNGAG00000018300) Acbd3 (ENSNGAG00000019285) ENSNGAG00000008728 Sde2 (ENSNGAG00000022889) ENSNGAG00000006685 #22 ENSNGAG00000023800 Pycr2 (ENSNGAG00000004193) ENSNGAG00000007205 Tmem63a (ENSNGAG00000010999) ENSNGAG00000013471 ENSNGAG00000007235 Kangaroo rat MODERN SPECIES 323 Sgcz (ENSDORG00000016664) Dlc1 (ENSDORG00000000271) ENSDORG00000013664 ENSDORG00000004157 Prag1 (ENSDORG00000011449) Cldn23 (ENSDORG00000026976) #7 Gm19410 (ENSDORG00000027381) #8 Mfhas1 (ENSDORG00000012091) #9 Eri1 (ENSDORG00000012092) #10 Ppp1r3b (ENSDORG00000013270) #11 Tnks (ENSDORG00000011584) #14 Dusp4 (ENSDORG00000030024) #15 Saraf (ENSDORG00000000028) #19 Leprotl1 (ENSDORG00000000029) #20 Mboat4 (ENSDORG00000024635) #21 Dctn6 (ENSDORG00000000033) #22 Rbpms (ENSDORG00000004501) #25 ENSDORG00000003054 #26 Gsr (ENSDORG00000010007) #27 ENSDORG00000029837 Ubxn8 (ENSDORG00000025536) #28 Ppp2cb (ENSDORG00000007881) #29 ENSDORG00000026659 Tex15 (ENSDORG00000026229) #31 Purg (ENSDORG00000023729) #32 Wrn (ENSDORG00000002696) #33 Nrg1 (ENSDORG00000006594) #34 Fut10 (ENSDORG00000015226) ENSDORG00000015722 Tti2 (ENSDORG00000024219) Rnf122 (ENSDORG00000015725) Rodentia_A ANCESTRAL SPECIES 21 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d ENSGT00940000158107 Hystricomorpha ANCESTRAL SPECIES 21 ENSGT00390000008508 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d ENSGT00940000158107 Naked mole-rat female MODERN SPECIES 25 ENSHGLG00000002808 ENSHGLG00000002892 #9 ERI1 (ENSHGLG00000002928) #10 ENSHGLG00000038493 PPP1R3B (ENSHGLG00000032439) #11 ENSHGLG00000041340 ENSHGLG00000003279 #14 ENSHGLG00000045110 #15 ENSHGLG00000040893 ENSHGLG00000043902 ENSHGLG00000003828 ENSHGLG00000004030 SARAF (ENSHGLG00000004133) #19 ENSHGLG00000004898 #20 ENSHGLG00000005636 #21 ENSHGLG00000001627 #22 ENSHGLG00000001817 ENSHGLG00000044234 ENSHGLG00000001883 ENSHGLG00000033530 ENSHGLG00000002303 #25 ENSHGLG00000002529 #26 SMIM18 (ENSHGLG00000002636) ENSHGLG00000039655 ENSHGLG00000039496 GSR (ENSHGLG00000008420) #27 ENSHGLG00000050810 ENSHGLG00000047725 UBXN8 (ENSHGLG00000037756) #28 PPP2CB (ENSHGLG00000004398) #29 TEX15 (ENSHGLG00000040015) #31 Hystricomorpha_a ANCESTRAL SPECIES 20 ENSGT00940000157146.b ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d ENSGT00940000158107 Guinea pig MODERN SPECIES 130 DLC1 (ENSCPOG00000012692) TRMT9B (ENSCPOG00000032099) ENSCPOG00000001023 PRAG1 (ENSCPOG00000021826) ENSCPOG00000024741 #8 MFHAS1 (ENSCPOG00000006116) #9 ERI1 (ENSCPOG00000030481) #10 PPP1R3B (ENSCPOG00000037520) #11 TNKS (ENSCPOG00000010040) #14 DUSP4 (ENSCPOG00000036262) #15 SARAF (ENSCPOG00000006162) #19 LEPROTL1 (ENSCPOG00000030496) #20 MBOAT4 (ENSCPOG00000010633) #21 DCTN6 (ENSCPOG00000011021) #22 RBPMS (ENSCPOG00000038597) #25 ENSCPOG00000008561 #26 Hystricomorpha_b ANCESTRAL SPECIES 86 ENSGT00940000157146.b ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000160373 ENSGT00440000033329.a.a.b ENSGT00940000157066 ENSGT00390000006975 #7 ENSGT00940000162544 #8 ENSGT00940000158928 #9 ENSGT00530000063205.B #10 ENSGT00940000159475 #11 ENSGT00940000156161.B #14 ENSGT00940000159066 #15 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d ENSGT00940000158107 Long-tailed chinchilla MODERN SPECIES 170 SGCZ (ENSCLAG00000001655) DLC1 (ENSCLAG00000002202) TRMT9B (ENSCLAG00000000634) ENSCLAG00000000683 PRAG1 (ENSCLAG00000000774) CLDN23 (ENSCLAG00000017543) #7 ENSCLAG00000001080 #8 MFHAS1 (ENSCLAG00000000979) #9 ERI1 (ENSCLAG00000001116) #10 PPP1R3B (ENSCLAG00000001207) #11 TNKS (ENSCLAG00000001619) #14 DUSP4 (ENSCLAG00000002370) #15 SARAF (ENSCLAG00000002432) #19 LEPROTL1 (ENSCLAG00000002667) #20 MBOAT4 (ENSCLAG00000001107) #21 DCTN6 (ENSCLAG00000001329) #22 RBPMS (ENSCLAG00000001518) #25 GTF2E2 (ENSCLAG00000001696) #26 SMIM18 (ENSCLAG00000000790) GSR (ENSCLAG00000000785) #27 UBXN8 (ENSCLAG00000001056) #28 PPP2CB (ENSCLAG00000001213) #29 TEX15 (ENSCLAG00000000845) #31 PURG (ENSCLAG00000001059) #32 WRN (ENSCLAG00000000817) #33 NRG1 (ENSCLAG00000001108) #34 FUT10 (ENSCLAG00000001573) MAK16 (ENSCLAG00000002726) TTI2 (ENSCLAG00000002873) RNF122 (ENSCLAG00000003028) DUSP26 (ENSCLAG00000003277) Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 137 IHH (ENSODEG00000006698) ENSODEG00000005977 SLC23A3 (ENSODEG00000007227) CNPPD1 (ENSODEG00000006063) RETREG2 (ENSODEG00000007657) ZFAND2B (ENSODEG00000006890) ABCB6 (ENSODEG00000006250) ATG9A (ENSODEG00000009070) ENSODEG00000006254 ENSODEG00000006309 GLB1L (ENSODEG00000006656) STK16 (ENSODEG00000006054) TUBA4A (ENSODEG00000007381) DNAJB2 (ENSODEG00000006729) PTPRN (ENSODEG00000006545) ENSODEG00000019355 #22 ENSODEG00000006500 DNPEP (ENSODEG00000007870) DES (ENSODEG00000005722) ENSODEG00000005456 ENSODEG00000007610 ASIC4 (ENSODEG00000008072) CHPF (ENSODEG00000006369) TMEM198 (ENSODEG00000006314) OBSL1 (ENSODEG00000007087) INHA (ENSODEG00000006794) STK11IP (ENSODEG00000006046) SLC4A3 (ENSODEG00000008058) ENSODEG00000019432 EPHA4 (ENSODEG00000007794) ENSODEG00000007595 Degu MODERN SPECIES 94 ENSODEG00000004351 TRMT9B (ENSODEG00000004422) ENSODEG00000004736 LONRF1 (ENSODEG00000004254) PRAG1 (ENSODEG00000004326) CLDN23 (ENSODEG00000019489) #7 MFHAS1 (ENSODEG00000004525) #9 ERI1 (ENSODEG00000004586) #10 PPP1R3B (ENSODEG00000019115) #11 ENSODEG00000005017 TNKS (ENSODEG00000004893) #14 DUSP4 (ENSODEG00000005526) #15 SARAF (ENSODEG00000005565) #19 LEPROTL1 (ENSODEG00000005881) #20 MBOAT4 (ENSODEG00000006303) #21 ENSODEG00000006428 #22 ENSODEG00000019309 RBPMS (ENSODEG00000006700) #25 GTF2E2 (ENSODEG00000006742) #26 ENSODEG00000008593 GSR (ENSODEG00000008858) #27 UBXN8 (ENSODEG00000004381) #28 ENSODEG00000004425 #29 ENSODEG00000004553 #31 PURG (ENSODEG00000019280) #32 WRN (ENSODEG00000004076) #33 ENSODEG00000004757 ENSODEG00000005162 ENSODEG00000005245 ENSODEG00000018985 BOC (ENSODEG00000004266) Degu MODERN SPECIES 44 ENSODEG00000018343 CELF4 (ENSODEG00000018464) ENSODEG00000018335 ENSODEG00000018449 ENSODEG00000018350 ENSODEG00000018344 ENSODEG00000018387 FHOD3 (ENSODEG00000018487) MOCOS (ENSODEG00000018329) ELP2 (ENSODEG00000018360) SLC39A6 (ENSODEG00000018391) RPRD1A (ENSODEG00000018331) ENSODEG00000018309 GALNT1 (ENSODEG00000018395) ENSODEG00000020532 ENSODEG00000018436 #22 ENSODEG00000018453 ENSODEG00000018420 ENSODEG00000020539 ZNF24 (ENSODEG00000018328) ENSODEG00000018345 ENSODEG00000018301 ZNF397 (ENSODEG00000018455) MAPRE2 (ENSODEG00000018430) DTNA (ENSODEG00000018476) ENSODEG00000018326 NOL4 (ENSODEG00000018414) ASXL3 (ENSODEG00000018431) ENSODEG00000020529 KLHL14 (ENSODEG00000018307) ENSODEG00000018292 Sciuridae ANCESTRAL SPECIES 47 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d ENSGT00940000158107 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 8 CHD9 (ENSSVLG00005025759) CHD9NB (ENSSVLG00005025793) ENSSVLG00005025795 TOX3 (ENSSVLG00005025797) SALL1 (ENSSVLG00005025799) CYLD (ENSSVLG00005025804) NOD2 (ENSSVLG00005025812) SNX20 (ENSSVLG00005025820) NKD1 (ENSSVLG00005025829) ENSSVLG00005025838 ADCY7 (ENSSVLG00005025857) TENT4B (ENSSVLG00005025875) HEATR3 (ENSSVLG00005025878) ENSSVLG00005025884 ENSSVLG00005025890 ENSSVLG00005025893 #22 ENSSVLG00005025899 ZNF423 (ENSSVLG00005016875) ENSSVLG00005016966 CBLN1 (ENSSVLG00005017023) ENSSVLG00005017072 N4BP1 (ENSSVLG00005017117) ENSSVLG00005017168 SIAH1 (ENSSVLG00005017212) LONP2 (ENSSVLG00005017285) ABCC11 (ENSSVLG00005017407) ABCC12 (ENSSVLG00005018066) ENSSVLG00005018386 ITFG1 (ENSSVLG00005018515) NETO2 (ENSSVLG00005018574) ENSSVLG00005018635 Eurasian red squirrel MODERN SPECIES 14 TMEM121B (ENSSVLG00005021991) HDHD5 (ENSSVLG00005021890) ADA2 (ENSSVLG00005021814) ENSSVLG00005021751 CECR2 (ENSSVLG00005021410) SLC25A18 (ENSSVLG00005021313) ENSSVLG00005021046 ENSSVLG00005021002 BCL2L13 (ENSSVLG00005020832) BID (ENSSVLG00005020750) ENSSVLG00005020690 PEX26 (ENSSVLG00005020583) USP18 (ENSSVLG00005020464) ENSSVLG00005020327 MBOAT4 (ENSSVLG00005020277) #21 ENSSVLG00005020253 #22 ENSSVLG00005020206 RBPMS (ENSSVLG00005020116) #25 SMIM18 (ENSSVLG00005020071) ENSSVLG00005019974 #26 ENSSVLG00005019906 GSR (ENSSVLG00005019759) #27 UBXN8 (ENSSVLG00005019558) #28 PPP2CB (ENSSVLG00005019386) #29 ENSSVLG00005018607 PURG (ENSSVLG00005018535) #32 WRN (ENSSVLG00005018499) #33 NRG1 (ENSSVLG00005017132) #34 ENSSVLG00005016877 ENSSVLG00005016864 FUT10 (ENSSVLG00005016821) Marmotini ANCESTRAL SPECIES 82 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d ENSGT00940000158107 Marmotini_b DUPLICATION Marmotini_b ANCESTRAL SPECIES 235 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890.w #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000164545 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 Arctic ground squirrel MODERN SPECIES 606 MBOAT4 (ENSUPAG00010016741) #21 ENSUPAG00010016743 #22 RBPMS (ENSUPAG00010016759) #25 GTF2E2 (ENSUPAG00010016807) #26 SMIM18 (ENSUPAG00010016863) ENSUPAG00010016868 GSR (ENSUPAG00010016883) #27 UBXN8 (ENSUPAG00010016902) #28 PPP2CB (ENSUPAG00010016924) #29 TEX15 (ENSUPAG00010016935) #31 PURG (ENSUPAG00010016946) #32 Squirrel MODERN SPECIES 392 MBOAT4 (ENSSTOG00000011525) #21 DCTN6 (ENSSTOG00000011527) #22 RBPMS (ENSSTOG00000026546) #25 GTF2E2 (ENSSTOG00000003714) #26 ENSSTOG00000022629 ENSSTOG00000034954 GSR (ENSSTOG00000001583) #27 UBXN8 (ENSSTOG00000024934) #28 ENSSTOG00000032331 #29 TEX15 (ENSSTOG00000006145) #31 ENSSTOG00000022216 PURG (ENSSTOG00000024490) #32 WRN (ENSSTOG00000013599) #33 ENSSTOG00000022932 Marmotini_b ANCESTRAL SPECIES ENSGT00390000017890.x #22 Arctic ground squirrel MODERN SPECIES 110 ENSUPAG00010004072 RNF2 (ENSUPAG00010004080) NIBAN1 (ENSUPAG00010004096) EDEM3 (ENSUPAG00010004991) C1orf21 (ENSUPAG00010005116) ENSUPAG00010005122 COLGALT2 (ENSUPAG00010005128) RGL1 (ENSUPAG00010005151) ARPC5 (ENSUPAG00010005182) NCF2 (ENSUPAG00010005185) SMG7 (ENSUPAG00010005207) NMNAT2 (ENSUPAG00010005271) ENSUPAG00010005282 LAMC2 (ENSUPAG00010005286) LAMC1 (ENSUPAG00010005318) ENSUPAG00010005331 #22 SHCBP1L (ENSUPAG00010005337) DHX9 (ENSUPAG00010005390) NPL (ENSUPAG00010005414) RGS8 (ENSUPAG00010005428) RGS16 (ENSUPAG00010005535) RNASEL (ENSUPAG00010005544) RGSL1 (ENSUPAG00010005674) ENSUPAG00010005685 ENSUPAG00010005694 ENSUPAG00010005701 ENSUPAG00010005716 ZNF648 (ENSUPAG00010005726) CACNA1E (ENSUPAG00010005734) IER5 (ENSUPAG00010005938) MR1 (ENSUPAG00010005940) Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 72 MBOAT4 (ENSMMMG00000014010) #21 DCTN6 (ENSMMMG00000014013) #22 ENSMMMG00000014026 #25 GTF2E2 (ENSMMMG00000014033) #26 SMIM18 (ENSMMMG00000014049) ENSMMMG00000014056 GSR (ENSMMMG00000014061) #27 UBXN8 (ENSMMMG00000014183) #28 PPP2CB (ENSMMMG00000014195) #29 TEX15 (ENSMMMG00000014201) #31 PURG (ENSMMMG00000014207) #32 WRN (ENSMMMG00000014218) #33 NRG1 (ENSMMMG00000014488) #34 FUT10 (ENSMMMG00000014749) ENSMMMG00000014764 ENSMMMG00000014767 ENSMMMG00000014771 Alpin marmot MODERN SPECIES 83 MPDZ (ENSMMMG00000007606) ENSMMMG00000007595 ENSMMMG00000007584 NFIB (ENSMMMG00000007378) ZDHHC21 (ENSMMMG00000007346) CER1 (ENSMMMG00000007339) FREM1 (ENSMMMG00000007262) TTC39B (ENSMMMG00000007232) ENSMMMG00000007221 #22 SNAPC3 (ENSMMMG00000007194) PSIP1 (ENSMMMG00000007110) CCDC171 (ENSMMMG00000007048) BNC2 (ENSMMMG00000006931) CNTLN (ENSMMMG00000006867) SH3GL2 (ENSMMMG00000006807) ENSMMMG00000006805 ADAMTSL1 (ENSMMMG00000006719) ENSMMMG00000006707 SAXO1 (ENSMMMG00000006694) RRAGA (ENSMMMG00000006689) ENSMMMG00000006686 HAUS6 (ENSMMMG00000006628) PLIN2 (ENSMMMG00000006611) DENND4C (ENSMMMG00000006441) Lagomorpha ANCESTRAL SPECIES 149 ENSGT00390000013419 #19 ENSGT00390000006503.b #20 ENSGT01030000234564.a.a.b.b #21 ENSGT00390000017890 #22 ENSGT00940000159617 #25 ENSGT00390000011749 #26 ENSGT00410000029064 ENSGT00940000156986 #27 ENSGT00390000018326 #28 ENSGT00550000074618.a.b #29 ENSGT00390000006260 #31 ENSGT00950000183162.b #32 ENSGT00940000159168 #33 ENSGT00940000157326 #34 ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159152.d ENSGT00940000158107 Rabbit MODERN SPECIES 11 ENSOCUG00000034997 DAAM1 (ENSOCUG00000003608) ENSOCUG00000007349 ENSOCUG00000012821 ENSOCUG00000030247 ENSOCUG00000035204 ENSOCUG00000038466 ENSOCUG00000035229 ENSOCUG00000011121 ENSOCUG00000037183 ENSOCUG00000034822 ENSOCUG00000031691 SARAF (ENSOCUG00000020996) #19 LEPROTL1 (ENSOCUG00000013931) #20 MBOAT4 (ENSOCUG00000014856) #21 DCTN6 (ENSOCUG00000010968) #22 RBPMS (ENSOCUG00000008572) #25 GTF2E2 (ENSOCUG00000016020) #26 SMIM18 (ENSOCUG00000039471) GSR (ENSOCUG00000017234) #27 ENSOCUG00000005223 #28 ENSOCUG00000005230 #29 ENSOCUG00000014028 TEX15 (ENSOCUG00000017093) #31 PURG (ENSOCUG00000022003) #32 WRN (ENSOCUG00000012620) #33 ENSOCUG00000030626 NRG1 (ENSOCUG00000005836) #34 FUT10 (ENSOCUG00000000857) MAK16 (ENSOCUG00000008735) TTI2 (ENSOCUG00000008740) Pika DUPLICATION Pika MODERN SPECIES 4956 ENSOPRG00000002703 #22 Pika DUPLICATION Pika MODERN SPECIES 5457 ENSOPRG00000004704 #22 Pika MODERN SPECIES 8846 ENSOPRG00000005061 #22