Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000153505.a.a.c.a.a.a.a.b ##7	ENSGT00940000153505.a.a.c.a.a.a.b.a.b #7	ENSGT00390000008749.e #8	ENSGT00390000004417.a #9	ENSGT00940000162896 #10	ENSGT00390000000803 #12	ENSGT00940000156485 #13	ENSGT00940000155094 #14	ENSGT00530000063023.B.o.a #15	ENSGT00530000063023.B.o.b #17	ENSGT00390000016779.b.a.b #16	ENSGT00940000158741 #18	ENSGT00390000017671.a #19	ENSGT00940000154222.d.b.d.b #20	ENSGT00390000009677 #21	ENSGT00940000157165 #22	ENSGT00950000182942.b.b #23	ENSGT00950000182942.b.a.a #24	ENSGT00950000182942.b.a.b #25	ENSGT00940000157590 #26	ENSGT00390000013297 #27	ENSGT00950000183064.a.b.a #28	ENSGT00940000153566.b #29	ENSGT00940000156937 #30	ENSGT00940000155900 #31	ENSGT00390000002749 #32	ENSGT00940000160304 #33	ENSGT00940000158679 #34	ENSGT00950000182856.b #35	ENSGT00940000155801 #36	ENSGT00940000159642 #37
Ryukyu mouse	MODERN SPECIES	18	Zfp810 (MGP_CAROLIEiJ_G0031904) #7	MGP_CAROLIEiJ_G0031905 #8	9530077C05Rik (MGP_CAROLIEiJ_G0031906) #9	Rp9 (MGP_CAROLIEiJ_G0031907) #10	MGP_CAROLIEiJ_G0031908 #11	MGP_CAROLIEiJ_G0031909 #12	Bmper (MGP_CAROLIEiJ_G0031910) #13	Npsr1 (MGP_CAROLIEiJ_G0031911) #14	Dpy19l1 (MGP_CAROLIEiJ_G0031912) #15	Cypt4 (MGP_CAROLIEiJ_G0031913) #16	MGP_CAROLIEiJ_G0031914 #17	Tbx20 (MGP_CAROLIEiJ_G0031915) #18	Herpud2 (MGP_CAROLIEiJ_G0031916) #19	Septin7 (MGP_CAROLIEiJ_G0031917) #20	Eepd1 (MGP_CAROLIEiJ_G0031918) #21	B3gat1 (MGP_CAROLIEiJ_G0031919) #22	Glb1l2 (MGP_CAROLIEiJ_G0031920) #23	Glb1l3 (MGP_CAROLIEiJ_G0031921) #24	Gm1110 (MGP_CAROLIEiJ_G0031922) #25	Acad8 (MGP_CAROLIEiJ_G0031923) #26	Thyn1 (MGP_CAROLIEiJ_G0031924) #27	Vps26b (MGP_CAROLIEiJ_G0031925) #28	Ncapd3 (MGP_CAROLIEiJ_G0031926) #29	Jam3 (MGP_CAROLIEiJ_G0031927) #30	Igsf9b (MGP_CAROLIEiJ_G0031928) #31	Spata19 (MGP_CAROLIEiJ_G0031929) #32	Opcml (MGP_CAROLIEiJ_G0031930) #33	Ntm (MGP_CAROLIEiJ_G0031931) #34	Snx19 (MGP_CAROLIEiJ_G0031932) #35	Adamts15 (MGP_CAROLIEiJ_G0031933) #36	Adamts8 (MGP_CAROLIEiJ_G0031934) #37
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000153505.a.a.c.a.a.a.a.b ##7	ENSGT00940000153505.a.a.c.a.a.a.b.a.b #7	ENSGT00390000008749.e #8	ENSGT00390000004417.a #9	ENSGT00940000162896 #10	ENSGT00390000000803 #12	ENSGT00940000156485 #13	ENSGT00940000155094 #14	ENSGT00530000063023.B.o.a #15	ENSGT00530000063023.B.o.b #17	ENSGT00390000016779.b.a.b #16	ENSGT00940000158741 #18	ENSGT00390000017671.a #19	ENSGT00940000154222.d.b.d.b #20	ENSGT00390000009677 #21	ENSGT00940000157165 #22	ENSGT00950000182942.b.b #23	ENSGT00950000182942.b.a.a #24	ENSGT00950000182942.b.a.b #25	ENSGT00940000157590 #26	ENSGT00390000013297 #27	ENSGT00950000183064.a.b.a #28	ENSGT00940000153566.b #29	ENSGT00940000156937 #30	ENSGT00940000155900 #31	ENSGT00390000002749 #32	ENSGT00940000160304 #33	ENSGT00940000158679 #34	ENSGT00950000182856.b #35	ENSGT00940000155801 #36	ENSGT00940000159642 #37
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000153505.a.a.c.a.a.a.a.b ##7	ENSGT00940000153505.a.a.c.a.a.a.b.a.b #7	ENSGT00390000008749.e #8	ENSGT00390000004417.a #9	ENSGT00940000162896 #10	ENSGT00390000000803 #12	ENSGT00940000156485 #13	ENSGT00940000155094 #14	ENSGT00530000063023.B.o.a #15	ENSGT00530000063023.B.o.b #17	ENSGT00390000016779.b.a.b #16	ENSGT00940000158741 #18	ENSGT00390000017671.a #19	ENSGT00940000154222.d.b.d.b #20	ENSGT00390000009677 #21	ENSGT00940000157165 #22	ENSGT00950000182942.b.b #23	ENSGT00950000182942.b.a.a #24	ENSGT00950000182942.b.a.b #25	ENSGT00940000157590 #26	ENSGT00390000013297 #27	ENSGT00950000183064.a.b.a #28	ENSGT00940000153566.b #29	ENSGT00940000156937 #30	ENSGT00940000155900 #31	ENSGT00390000002749 #32	ENSGT00940000160304 #33	ENSGT00940000158679 #34	ENSGT00950000182856.b #35	ENSGT00940000155801 #36	ENSGT00940000159642 #37
spretus	MODERN SPECIES	18	Zfp810 (MGP_SPRETEiJ_G0033027) #7	Anln (MGP_SPRETEiJ_G0033028) #8	9530077C05Rik (MGP_SPRETEiJ_G0033029) #9	Rp9 (MGP_SPRETEiJ_G0033030) #10	MGP_SPRETEiJ_G0033031	Bbs9 (MGP_SPRETEiJ_G0033032) #12	Bmper (MGP_SPRETEiJ_G0033033) #13	Npsr1 (MGP_SPRETEiJ_G0033034) #14	Dpy19l1 (MGP_SPRETEiJ_G0033035) #15	Dpy19l2 (MGP_SPRETEiJ_G0033036) #17	Cypt4 (MGP_SPRETEiJ_G0033037) #16	Tbx20 (MGP_SPRETEiJ_G0033038) #18	Herpud2 (MGP_SPRETEiJ_G0033039) #19	Septin7 (MGP_SPRETEiJ_G0033040) #20	Eepd1 (MGP_SPRETEiJ_G0033041) #21	B3gat1 (MGP_SPRETEiJ_G0033042) #22	Glb1l2 (MGP_SPRETEiJ_G0033043) #23	Glb1l3 (MGP_SPRETEiJ_G0033044) #24	Gm1110 (MGP_SPRETEiJ_G0033045) #25	Acad8 (MGP_SPRETEiJ_G0033046) #26	Thyn1 (MGP_SPRETEiJ_G0033047) #27	Vps26b (MGP_SPRETEiJ_G0033048) #28	Ncapd3 (MGP_SPRETEiJ_G0033049) #29	Jam3 (MGP_SPRETEiJ_G0033050) #30	Igsf9b (MGP_SPRETEiJ_G0033051) #31	Spata19 (MGP_SPRETEiJ_G0033052) #32	Opcml (MGP_SPRETEiJ_G0033053) #33	Ntm (MGP_SPRETEiJ_G0033054) #34	Snx19 (MGP_SPRETEiJ_G0033055) #35	Adamts15 (MGP_SPRETEiJ_G0033056) #36	Adamts8 (MGP_SPRETEiJ_G0033057) #37
Steppe mouse	MODERN SPECIES	3347	Senp7 (ENSMSIG00000020308)	Trmt10c (ENSMSIG00000020560)	ENSMSIG00000020571	Zbtb11 (ENSMSIG00000020610)	ENSMSIG00000020655	Dpy19l1 (ENSMSIG00000020717) #15	ENSMSIG00000020761	Dpy19l2 (ENSMSIG00000020769) #17	Cypt4 (ENSMSIG00000020850) #16	Tbx20 (ENSMSIG00000020856) #18	Herpud2 (ENSMSIG00000020904) #19	ENSMSIG00000020928	ENSMSIG00000020933	ENSMSIG00000020939 #20	Eepd1 (ENSMSIG00000020996) #21	B3gat1 (ENSMSIG00000021035) #22	Glb1l2 (ENSMSIG00000021087) #23	ENSMSIG00000021276	Glb1l3 (ENSMSIG00000021282) #24	Gm1110 (ENSMSIG00000021364) #25	Acad8 (ENSMSIG00000021418) #26	Thyn1 (ENSMSIG00000021465) #27	Vps26b (ENSMSIG00000021566) #28	Ncapd3 (ENSMSIG00000021587) #29	Jam3 (ENSMSIG00000021705) #30	Igsf9b (ENSMSIG00000021717) #31	Spata19 (ENSMSIG00000021871) #32	Mylip (ENSMSIG00000021911)
Mouse	MODERN SPECIES	18	Zfp599 (ENSMUSG00000062794) ##7	Zfp810 (ENSMUSG00000066829) #7	Anln (ENSMUSG00000036777) #8	Rp9 (ENSMUSG00000032239) #10	9530077C05Rik (ENSMUSG00000036411) #9	Bbs9 (ENSMUSG00000035919) #12	Bmper (ENSMUSG00000031963) #13	Npsr1 (ENSMUSG00000043659) #14	Dpy19l1 (ENSMUSG00000043067) #15	Dpy19l2 (ENSMUSG00000085576) #17	Cypt4 (ENSMUSG00000047995) #16	Tbx20 (ENSMUSG00000031965) #18	Herpud2 (ENSMUSG00000008429) #19	Septin7 (ENSMUSG00000001833) #20	Eepd1 (ENSMUSG00000036611) #21	B3gat1 (ENSMUSG00000045994) #22	Glb1l2 (ENSMUSG00000036395) #23	Glb1l3 (ENSMUSG00000031966) #24	Gm1110 (ENSMUSG00000079644) #25	Acad8 (ENSMUSG00000031969) #26	Thyn1 (ENSMUSG00000035443) #27	Vps26b (ENSMUSG00000031988) #28	Ncapd3 (ENSMUSG00000035024) #29	Jam3 (ENSMUSG00000031990) #30	Igsf9b (ENSMUSG00000034275) #31	Spata19 (ENSMUSG00000031991) #32	Opcml (ENSMUSG00000062257) #33	Ntm (ENSMUSG00000059974) #34	Snx19 (ENSMUSG00000031993) #35	Adamts15 (ENSMUSG00000033453) #36	Adamts8 (ENSMUSG00000031994) #37