Muroidea	ANCESTRAL SPECIES	2	ENSGT01100000263497.B #10	ENSGT00390000011639 #11	ENSGT00940000162696	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00400000022873 #14	ENSGT00510000049875	ENSGT00390000002615 #15	ENSGT00390000008374 #16	ENSGT00940000159139 #17	ENSGT00940000156954	ENSGT00940000159921 #19	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #20	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.a ##23	ENSGT00940000154902.bb.b #23	ENSGT00940000155073.b #24	ENSGT00950000183045.A.a.a #25	ENSGT00730000111073 #32	ENSGT00950000182841.b.a.a.b.a.a.b.a #33	ENSGT00940000158650 #34	ENSGT00940000159102 #36	ENSGT00950000182990.a.a.a.b.u.b #37	ENSGT00950000182990.a.a.a.b.u.a ##37	ENSGT00950000182990.a.a.b.b ##37	ENSGT00520000061410	ENSGT00940000155807.a	ENSGT00390000010089.f	ENSGT00530000063626.a
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000160376	ENSGT01100000263497.B #10	ENSGT00390000011639 #11	ENSGT00940000162696	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00400000022873 #14	ENSGT00390000002615 #15	ENSGT00390000008374 #16	ENSGT00940000159139 #17	ENSGT00940000156954	ENSGT00940000159921 #19	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #20	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.a ##23	ENSGT00940000154902.bb.b #23	ENSGT00940000155073.b #24	ENSGT00950000183045.A.a.a #25	ENSGT00530000063866.f.a #29	ENSGT00390000013802.u #30	ENSGT00730000111073 #32	ENSGT00950000182841.b.a.a.b.a.a.b.a #33	ENSGT00940000158650 #34	ENSGT00940000159102 #36	ENSGT00950000182990.a.a.a.b.u.b #37	ENSGT00950000182990.a.a.a.b.u.a ##37	ENSGT00950000182990.a.a.b.b ##37	ENSGT00520000061410	ENSGT00940000155807.a
Murinae	ANCESTRAL SPECIES		ENSGT00940000160376	ENSGT01100000263497.B #10	ENSGT00390000011639 #11	ENSGT00940000162696	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00400000022873 #14	ENSGT00390000002615 #15	ENSGT00390000008374 #16	ENSGT00940000159139 #17	ENSGT00940000156954	ENSGT00940000159921 #19	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #20	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.b #23	ENSGT00940000154902.bb.a ##23	ENSGT00940000155073.b #24	ENSGT00950000183045.A.a.a #25	ENSGT00530000063866.f.a.a.a #26	ENSGT00530000063866.f.a.b #27	ENSGT00390000013802.u #30	ENSGT00730000111073 #32	ENSGT00950000182841.b.a.a.b.a.a.b.a #33	ENSGT00940000158650 #34	ENSGT00940000159102 #36	ENSGT00950000182990.a.a.a.b.u.b #37	ENSGT00950000182990.a.a.a.b.u.a ##37	ENSGT00950000182990.a.a.b.b ##37	ENSGT00940000155807.a
Rat	DUPLICATION
Rat	MODERN SPECIES		Polr2g (ENSRNOG00000019439) #7	Ttc9c (ENSRNOG00000019464) #8	Hnrnpul2 (ENSRNOG00000019507) #9	Gng3 (ENSRNOG00000019570) #10	Bscl2 (ENSRNOG00000052393) #11	Ubxn1 (ENSRNOG00000019666) #12	Uqcc3 (ENSRNOG00000045561) #13	Gm49403 (ENSRNOG00000064559) #14	C1h11orf98 (ENSRNOG00000019701) #15	Ints5 (ENSRNOG00000026005) #16	Ganab (ENSRNOG00000019724) #17	B3gat3 (ENSRNOG00000019873) #18	Rom1 (ENSRNOG00000019858) #19	Mta2 (ENSRNOG00000019913) #20	Tut1 (ENSRNOG00000020047) #21	Eef1g (ENSRNOG00000020075) #22	Ahnak (ENSRNOG00000057569) #23	Scgb1a1 (ENSRNOG00000020196) #24	Asrgl1 (ENSRNOG00000020202) #25	Scgb1d2 (ENSRNOG00000020294) #26	Scgb1d4 (ENSRNOG00000020301) #27	Scgb2a1 (ENSRNOG00000020305) #28	AABR07006242.1 (ENSRNOG00000028909) #29	Scgb2a1 (ENSRNOG00000023151) #30	ENSRNOG00000062718 #31	Incenp (ENSRNOG00000032929) #32	Fth1 (ENSRNOG00000022619) #33	Best1 (ENSRNOG00000020346) #34	AABR07006255.1 (ENSRNOG00000036633) #35	Rab3il1 (ENSRNOG00000020349) #36	Fads3 (ENSRNOG00000020385) #37
Rat	DUPLICATION
Rat	MODERN SPECIES	4	Igsf8 (ENSRNOG00000007604)	Atp1a2 (ENSRNOG00000007290)	Atp1a4 (ENSRNOG00000032378)	Casq1 (ENSRNOG00000006930)	Pea15 (ENSRNOG00000046996)	Dcaf8 (ENSRNOG00000006785)	LOC102548286 (ENSRNOG00000057116)	Copa (ENSRNOG00000006247)	Ncstn (ENSRNOG00000005355)	Nhlh1 (ENSRNOG00000005166)	Vangl2 (ENSRNOG00000004889)	Slamf6 (ENSRNOG00000038286)	Cd84 (ENSRNOG00000022884)	Slamf1 (ENSRNOG00000059073)	Cd48 (ENSRNOG00000004737)	ENSRNOG00000062700 ##22	Slamf7 (ENSRNOG00000023209)	Ly9 (ENSRNOG00000025069)	Cd244 (ENSRNOG00000064255)	Cd244 (ENSRNOG00000068754)	Itln1 (ENSRNOG00000004678)	LOC100359583 (ENSRNOG00000025731)	F11r (ENSRNOG00000004414)	ENSRNOG00000068856	Arhgap30 (ENSRNOG00000004192)	Tstd1 (ENSRNOG00000004255)	Nectin4 (ENSRNOG00000004029)	Klhdc9 (ENSRNOG00000004022)	Nit1 (ENSRNOG00000003881)	Dedd (ENSRNOG00000003779)	Pfdn2 (ENSRNOG00000066932)
Rat	MODERN SPECIES	15	Pusl1 (ENSRNOG00000022354)	Ints11 (ENSRNOG00000019712)	Cptp (ENSRNOG00000022455)	Tas1r3 (ENSRNOG00000019589)	Dvl1 (ENSRNOG00000019423)	Mxra8 (ENSRNOG00000019244)	Ccnl2 (ENSRNOG00000018691)	Mrpl20 (ENSRNOG00000018647)	Ankrd65 (ENSRNOG00000043331)	Tmem88b (ENSRNOG00000036869)	Vwa1 (ENSRNOG00000018338)	Atad3a (ENSRNOG00000018118)	Tmem240 (ENSRNOG00000066137)	Ssu72 (ENSRNOG00000017829)	LOC100364191 (ENSRNOG00000030447)	ENSRNOG00000065253 ##22	Mib2 (ENSRNOG00000017564)	Mmp23 (ENSRNOG00000017477)	Cdk11b (ENSRNOG00000017213)	Slc35e2b (ENSRNOG00000017075)	Nadk (ENSRNOG00000016936)	Gnb1 (ENSRNOG00000016638)	Tmem52 (ENSRNOG00000016618)	Cfap74 (ENSRNOG00000023627)	Gabrd (ENSRNOG00000016385)	Prkcz (ENSRNOG00000015480)	Faap20 (ENSRNOG00000036876)	Ski (ENSRNOG00000055340)	Morn1 (ENSRNOG00000014642)	Rer1 (ENSRNOG00000014270)	Pex10 (ENSRNOG00000024012)
Mus	ANCESTRAL SPECIES		ENSGT00940000160376	ENSGT01100000263497.B #10	ENSGT00390000011639 #11	ENSGT00940000162696	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00400000022873 #14	ENSGT00390000002615 #15	ENSGT00390000008374 #16	ENSGT00940000159139 #17	ENSGT00940000156954	ENSGT00940000159921 #19	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #20	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.b #23	ENSGT00940000154902.bb.a ##23	ENSGT00940000155073.b #24	ENSGT00950000183045.A.a.a #25	ENSGT00390000013802.u #30	ENSGT00730000111073 #32	ENSGT00950000182841.b.a.a.b.a.a.b.a #33	ENSGT00940000158650 #34	ENSGT00940000159102 #36	ENSGT00950000182990.a.a.a.b.u.b #37	ENSGT00950000182990.a.a.a.b.u.a ##37	ENSGT00950000182990.a.a.b.b ##37	ENSGT00940000155807.a	ENSGT00390000010089.f	ENSGT00530000063626.a
Shrew mouse	MODERN SPECIES		Zbtb3 (MGP_PahariEiJ_G0014149)	Ttc9c (MGP_PahariEiJ_G0014150) #8	Hnrnpul2 (MGP_PahariEiJ_G0014151)	Gng3 (MGP_PahariEiJ_G0014152) #10	Bscl2 (MGP_PahariEiJ_G0014153) #11	Lrrn4cl (MGP_PahariEiJ_G0014154)	Ubxn1 (MGP_PahariEiJ_G0014155) #12	Uqcc3 (MGP_PahariEiJ_G0014156) #13	Ints5 (MGP_PahariEiJ_G0014158) #16	Ganab (MGP_PahariEiJ_G0014159) #17	B3gat3 (MGP_PahariEiJ_G0014160)	Rom1 (MGP_PahariEiJ_G0014161) #19	Eml3 (MGP_PahariEiJ_G0014162) #18	Mta2 (MGP_PahariEiJ_G0014163) #20	Tut1 (MGP_PahariEiJ_G0014164) #21	Eef1g (MGP_PahariEiJ_G0014165) #22	MGP_PahariEiJ_G0014166 #23	Scgb1a1 (MGP_PahariEiJ_G0014167) #24	Asrgl1 (MGP_PahariEiJ_G0014168) #25	Incenp (MGP_PahariEiJ_G0014169) #32	Fth1 (MGP_PahariEiJ_G0014170) #33	Best1 (MGP_PahariEiJ_G0014171) #34	Rab3il1 (MGP_PahariEiJ_G0014172) #36	Fads3 (MGP_PahariEiJ_G0014173) #37	Fads2 (MGP_PahariEiJ_G0014174) ##37	Fads1 (MGP_PahariEiJ_G0014175) ##37	Fen1 (MGP_PahariEiJ_G0014176)	Tmem258 (MGP_PahariEiJ_G0014177)	Myrf (MGP_PahariEiJ_G0014178)	MGP_PahariEiJ_G0014179	Syt7 (MGP_PahariEiJ_G0014180)
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000160376	ENSGT01100000263497.B #10	ENSGT00390000011639 #11	ENSGT00940000162696	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00400000022873 #14	ENSGT00390000002615 #15	ENSGT00390000008374 #16	ENSGT00940000159139 #17	ENSGT00940000156954	ENSGT00940000159921 #19	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #20	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.b #23	ENSGT00940000154902.bb.a ##23	ENSGT00940000155073.b #24	ENSGT00950000183045.A.a.a #25	ENSGT00390000013802.u #30	ENSGT00730000111073 #32	ENSGT00950000182841.b.a.a.b.a.a.b.a #33	ENSGT00940000158650 #34	ENSGT00940000159102 #36	ENSGT00950000182990.a.a.a.b.u.b #37	ENSGT00950000182990.a.a.a.b.u.a ##37	ENSGT00950000182990.a.a.b.b ##37	ENSGT00940000155807.a	ENSGT00390000010089.f	ENSGT00530000063626.a
Ryukyu mouse	MODERN SPECIES	10	Hnrnpul2 (MGP_CAROLIEiJ_G0022656)	Gng3 (MGP_CAROLIEiJ_G0022657) #10	Bscl2 (MGP_CAROLIEiJ_G0022658) #11	Lrrn4cl (MGP_CAROLIEiJ_G0022659)	Ubxn1 (MGP_CAROLIEiJ_G0022660) #12	Uqcc3 (MGP_CAROLIEiJ_G0022661) #13	MGP_CAROLIEiJ_G0022662 #14	MGP_CAROLIEiJ_G0022663 #15	Ints5 (MGP_CAROLIEiJ_G0022664) #16	Ganab (MGP_CAROLIEiJ_G0022665) #17	B3gat3 (MGP_CAROLIEiJ_G0022666)	Rom1 (MGP_CAROLIEiJ_G0022667) #19	Eml3 (MGP_CAROLIEiJ_G0022668) #18	Mta2 (MGP_CAROLIEiJ_G0022669) #20	Tut1 (MGP_CAROLIEiJ_G0022670) #21	Eef1g (MGP_CAROLIEiJ_G0022671) #22	MGP_CAROLIEiJ_G0022672 ##23	Scgb1a1 (MGP_CAROLIEiJ_G0022673) #24	Asrgl1 (MGP_CAROLIEiJ_G0022674) #25	Incenp (MGP_CAROLIEiJ_G0022675) #32	Fth1 (MGP_CAROLIEiJ_G0022676) #33	Best1 (MGP_CAROLIEiJ_G0022677) #34	Rab3il1 (MGP_CAROLIEiJ_G0022678) #36	Fads3 (MGP_CAROLIEiJ_G0022679) #37	Fads2 (MGP_CAROLIEiJ_G0022680) ##37	Fads1 (MGP_CAROLIEiJ_G0022681) ##37	Fen1 (MGP_CAROLIEiJ_G0022682)	Tmem258 (MGP_CAROLIEiJ_G0022683)	Myrf (MGP_CAROLIEiJ_G0022684)	Dagla (MGP_CAROLIEiJ_G0022685)	Syt7 (MGP_CAROLIEiJ_G0022686)
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000160376	ENSGT01100000263497.B #10	ENSGT00390000011639 #11	ENSGT00940000162696	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00400000022873 #14	ENSGT00390000002615 #15	ENSGT00390000008374 #16	ENSGT00940000159139 #17	ENSGT00940000156954	ENSGT00940000159921 #19	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #20	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.b #23	ENSGT00940000154902.bb.a ##23	ENSGT00940000155073.b #24	ENSGT00950000183045.A.a.a #25	ENSGT00390000013802.u.a #30	ENSGT00730000111073 #32	ENSGT00950000182841.b.a.a.b.a.a.b.a #33	ENSGT00940000158650 #34	ENSGT00940000159102 #36	ENSGT00950000182990.a.a.a.b.u.b #37	ENSGT00950000182990.a.a.a.b.u.a ##37	ENSGT00950000182990.a.a.b.b ##37	ENSGT00940000155807.a	ENSGT00390000010089.f	ENSGT00530000063626.a
Mouse	MODERN SPECIES	10	Gng3 (ENSMUSG00000071658) #10	Bscl2 (ENSMUSG00000071657) #11	Lrrn4cl (ENSMUSG00000071656)	Ubxn1 (ENSMUSG00000071655) #12	Uqcc3 (ENSMUSG00000071654) #13	Lbhd1 (ENSMUSG00000096740)	1810009A15Rik (ENSMUSG00000071653) #15	Gm49416 (ENSMUSG00000116347)	Ints5 (ENSMUSG00000071652) #16	Ganab (ENSMUSG00000071650) #17	B3gat3 (ENSMUSG00000071649)	Rom1 (ENSMUSG00000071648) #19	Eml3 (ENSMUSG00000071647) #18	Mta2 (ENSMUSG00000071646) #20	Tut1 (ENSMUSG00000071645) #21	Eef1g (ENSMUSG00000071644) #22	Ahnak (ENSMUSG00000069833) #23	Scgb1a1 (ENSMUSG00000024653) #24	Asrgl1 (ENSMUSG00000024654) #25	Scgb2a2 (ENSMUSG00000096872) #30	Incenp (ENSMUSG00000024660) #32	Fth1 (ENSMUSG00000024661) #33	Best1 (ENSMUSG00000037418) #34	Rab3il1 (ENSMUSG00000024663) #36	Fads3 (ENSMUSG00000024664) #37	Fads2 (ENSMUSG00000024665) ##37	Fads1 (ENSMUSG00000010663) ##37	Fen1 (ENSMUSG00000024742)	Tmem258 (ENSMUSG00000036372)	Myrf (ENSMUSG00000036098)	Dagla (ENSMUSG00000035735)
Mus_C	ANCESTRAL SPECIES	25	ENSGT00940000160376	ENSGT01100000263497.B #10	ENSGT00390000011639 #11	ENSGT00940000162696	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00400000022873 #14	ENSGT00390000002615 #15	ENSGT00390000008374 #16	ENSGT00940000159139 #17	ENSGT00940000156954	ENSGT00940000159921 #19	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #20	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.b #23	ENSGT00940000154902.bb.a ##23	ENSGT00940000155073.b #24	ENSGT00950000183045.A.a.a #25	ENSGT00390000013802.u.a #30	ENSGT00730000111073 #32	ENSGT00950000182841.b.a.a.b.a.a.b.a #33	ENSGT00940000158650 #34	ENSGT00940000159102 #36	ENSGT00950000182990.a.a.a.b.u.b #37	ENSGT00950000182990.a.a.a.b.u.a ##37	ENSGT00950000182990.a.a.b.b ##37	ENSGT00940000155807.a	ENSGT00390000010089.f	ENSGT00530000063626.a
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	2399						Uqcc3 (ENSMSIG00000030087) #13	ENSMSIG00000030086 #14	1810009A15Rik (ENSMSIG00000030082) #15	Ints5 (ENSMSIG00000030081) #16	Ganab (ENSMSIG00000030073) #17	B3gat3 (ENSMSIG00000030069)	Rom1 (ENSMSIG00000030067) #19	Eml3 (ENSMSIG00000030059) #18	Mta2 (ENSMSIG00000030052) #20	Tut1 (ENSMSIG00000030047) #21	ENSMSIG00000030044 #22	ENSMSIG00000030038 #23	ENSMSIG00000030024 ##23	Scgb1a1 (ENSMSIG00000030022) #24	Asrgl1 (ENSMSIG00000030021) #25
Steppe mouse	MODERN SPECIES	38							Gfra1 (ENSMSIG00000028497)	Ccdc172 (ENSMSIG00000028482)	Pnlip (ENSMSIG00000028475)	Pnliprp1 (ENSMSIG00000028468)	Pnliprp2 (ENSMSIG00000028454)	1700019N19Rik (ENSMSIG00000028440)	Hspa12a (ENSMSIG00000028425)	Eno4 (ENSMSIG00000028394)	Shtn1 (ENSMSIG00000028359)	ENSMSIG00000028327 #22	Vax1 (ENSMSIG00000028320)	ENSMSIG00000028314	Kcnk18 (ENSMSIG00000028309)	Slc18a2 (ENSMSIG00000028291)	Pdzd8 (ENSMSIG00000028285)	Emx2 (ENSMSIG00000028276)	Rab11fip2 (ENSMSIG00000028250)	Fam204a (ENSMSIG00000028227)	Prlhr (ENSMSIG00000028226)	Cacul1 (ENSMSIG00000028208)	Nanos1 (ENSMSIG00000028205)	Eif3a (ENSMSIG00000028178)	ENSMSIG00000028172	Dennd10 (ENSMSIG00000028163)	Sfxn4 (ENSMSIG00000028157)
spretus	MODERN SPECIES	10	Hnrnpul2 (MGP_SPRETEiJ_G0023569)	Gng3 (MGP_SPRETEiJ_G0023570) #10	Bscl2 (MGP_SPRETEiJ_G0023571) #11	Lrrn4cl (MGP_SPRETEiJ_G0023572)	Ubxn1 (MGP_SPRETEiJ_G0023573) #12	Uqcc3 (MGP_SPRETEiJ_G0023574) #13	MGP_SPRETEiJ_G0023575 #14	1810009A15Rik (MGP_SPRETEiJ_G0023576) #15	Ints5 (MGP_SPRETEiJ_G0023577) #16	Ganab (MGP_SPRETEiJ_G0023578) #17	B3gat3 (MGP_SPRETEiJ_G0023579)	Rom1 (MGP_SPRETEiJ_G0023580) #19	Eml3 (MGP_SPRETEiJ_G0023581) #18	Mta2 (MGP_SPRETEiJ_G0023582) #20	Tut1 (MGP_SPRETEiJ_G0023583) #21	Eef1g (MGP_SPRETEiJ_G0023584) #22	Ahnak (MGP_SPRETEiJ_G0023585) #23	Scgb1a1 (MGP_SPRETEiJ_G0023586) #24	Asrgl1 (MGP_SPRETEiJ_G0023587) #25	Scgb2a2 (MGP_SPRETEiJ_G0023588) #30	Incenp (MGP_SPRETEiJ_G0023589) #32	Fth1 (MGP_SPRETEiJ_G0023590) #33	Best1 (MGP_SPRETEiJ_G0023591) #34	Rab3il1 (MGP_SPRETEiJ_G0023592) #36	Fads3 (MGP_SPRETEiJ_G0023593) #37	Fads2 (MGP_SPRETEiJ_G0023594) ##37	Fads1 (MGP_SPRETEiJ_G0023595) ##37	Fen1 (MGP_SPRETEiJ_G0023596)	Tmem258 (MGP_SPRETEiJ_G0023597)	Myrf (MGP_SPRETEiJ_G0023598)	Dagla (MGP_SPRETEiJ_G0023599)
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000160376	ENSGT01100000263497.B #10	ENSGT00390000011639 #11	ENSGT00940000162696	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00400000022873 #14	ENSGT00390000002615 #15	ENSGT00390000008374 #16	ENSGT00940000159139 #17	ENSGT00940000156954	ENSGT00940000159921 #19	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #20	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.a ##23	ENSGT00940000154902.bb.b #23	ENSGT00940000155073.b #24	ENSGT00950000183045.A.a.a #25	ENSGT00390000013802.u #30	ENSGT00730000111073 #32	ENSGT00950000182841.b.a.a.b.a.a.b.a #33	ENSGT00940000158650 #34	ENSGT00940000159102 #36	ENSGT00950000182990.a.a.a.b.u.b #37	ENSGT00950000182990.a.a.a.b.u.a ##37	ENSGT00950000182990.a.a.b.b ##37	ENSGT00520000061410	ENSGT00940000155807.a	ENSGT00390000010089.f
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000160376	ENSGT01100000263497.B #10	ENSGT00390000011639 #11	ENSGT00940000162696	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00400000022873 #14	ENSGT00390000002615 #15	ENSGT00390000008374 #16	ENSGT00940000159139 #17	ENSGT00940000156954	ENSGT00940000159921 #19	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #20	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.a ##23	ENSGT00940000154902.bb.b #23	ENSGT00940000155073.b #24	ENSGT00950000183045.A.a.a #25	ENSGT00730000111073 #32	ENSGT00950000182841.b.a.a.b.a.a.b.a #33	ENSGT00940000158650 #34	ENSGT00940000159102 #36	ENSGT00950000182990.a.a.a.b.u.b #37	ENSGT00950000182990.a.a.a.b.u.a ##37	ENSGT00950000182990.a.a.b.b ##37	ENSGT00940000155807.a	ENSGT00520000061410	ENSGT00390000010089.f	ENSGT00530000063626.a
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	16	Hnrnpul2 (ENSMOCG00000020000)	Gng3 (ENSMOCG00000020628) #10	ENSMOCG00000009001	Lrrn4cl (ENSMOCG00000009512)	Ubxn1 (ENSMOCG00000010707) #12	Uqcc3 (ENSMOCG00000009973) #13	ENSMOCG00000016664 #14	ENSMOCG00000017433 #15	Ints5 (ENSMOCG00000017768) #16	Ganab (ENSMOCG00000021495) #17	B3gat3 (ENSMOCG00000011586)	Rom1 (ENSMOCG00000012581) #19	Eml3 (ENSMOCG00000013304) #18	Mta2 (ENSMOCG00000001999) #20	Tut1 (ENSMOCG00000015834) #21	ENSMOCG00000019677 #22	ENSMOCG00000012405 ##23	Scgb1a1 (ENSMOCG00000014419) #24	Asrgl1 (ENSMOCG00000022216) #25	Fam111a (ENSMOCG00000017922)	Gm4952 (ENSMOCG00000015076)	Glyat (ENSMOCG00000016115)	Keg1 (ENSMOCG00000012983)	Cntf (ENSMOCG00000016049)	Zfp91 (ENSMOCG00000018468)	Lpxn (ENSMOCG00000019266)	Or5b21 (ENSMOCG00000002067)	ENSMOCG00000009033	ENSMOCG00000017684	Or9q1 (ENSMOCG00000009793)	Tle4 (ENSMOCG00000011846)
Prairie vole	MODERN SPECIES	81	Eif3m (ENSMOCG00000020753)	Wt1 (ENSMOCG00000006225)	Them7 (ENSMOCG00000010419)	Rcn1 (ENSMOCG00000011897)	Pax6 (ENSMOCG00000017625)	Elp4 (ENSMOCG00000009942)	Immp1l (ENSMOCG00000000239)	Dnajc24 (ENSMOCG00000003631)	ENSMOCG00000009178	Mpped2 (ENSMOCG00000002797)	Arl14ep (ENSMOCG00000016817)	Fshb (ENSMOCG00000019709)	Kcna4 (ENSMOCG00000010908)	Mettl15 (ENSMOCG00000014905)	Kif18a (ENSMOCG00000019106)	ENSMOCG00000012556 #22	BDNF (ENSMOCG00000000420)	Lin7c (ENSMOCG00000017113)	Lgr4 (ENSMOCG00000016806)	Ccdc34 (ENSMOCG00000007200)	Bbox1 (ENSMOCG00000001592)	Fibin (ENSMOCG00000009161)	Slc5a12 (ENSMOCG00000015104)	Ano3 (ENSMOCG00000021978)	Muc15 (ENSMOCG00000015142)	Qser1 (ENSMOCG00000001478)	Depdc7 (ENSMOCG00000016709)	Tcp11l1 (ENSMOCG00000017298)	Cstf3 (ENSMOCG00000017583)	Hipk3 (ENSMOCG00000002204)	D430041D05Rik (ENSMOCG00000003074)
Northern American deer mouse	MODERN SPECIES		Ttc9c (ENSPEMG00000026108) #8	Hnrnpul2 (ENSPEMG00000015546)	Gng3 (ENSPEMG00000028724) #10	Bscl2 (ENSPEMG00000031381) #11	Lrrn4cl (ENSPEMG00000016106)	Ubxn1 (ENSPEMG00000015778) #12	Uqcc3 (ENSPEMG00000030804) #13	1810009A15Rik (ENSPEMG00000031275) #15	Ints5 (ENSPEMG00000004838) #16	Ganab (ENSPEMG00000003185) #17	B3gat3 (ENSPEMG00000009881)	Rom1 (ENSPEMG00000003110) #19	Eml3 (ENSPEMG00000008367) #18	Mta2 (ENSPEMG00000007490) #20	Tut1 (ENSPEMG00000018332) #21	Eef1g (ENSPEMG00000004247) #22	ENSPEMG00000019243 ##23	ENSPEMG00000026154 #23	ENSPEMG00000024701	Scgb1a1 (ENSPEMG00000009557) #24	Asrgl1 (ENSPEMG00000018019) #25	ENSPEMG00000028067	Incenp (ENSPEMG00000008252) #32	ENSPEMG00000020638	Fth1 (ENSPEMG00000017564) #33	ENSPEMG00000012703 #34	Rab3il1 (ENSPEMG00000011822) #36	Fads3 (ENSPEMG00000012107) #37	Fads2 (ENSPEMG00000015890) ##37	Fads1 (ENSPEMG00000008265) ##37	Fen1 (ENSPEMG00000009788)
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000160376	ENSGT01100000263497.B #10	ENSGT00390000011639 #11	ENSGT00940000162696	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00400000022873 #14	ENSGT00390000002615 #15	ENSGT00390000008374 #16	ENSGT00940000159139 #17	ENSGT00940000156954	ENSGT00940000159921 #19	ENSGT00940000159589 #18	ENSGT01030000234573.B.c.b.b #20	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.b #23	ENSGT00940000155073.b #24	ENSGT00950000183045.A.a.a #25	ENSGT00390000013802.u #30	ENSGT00730000111073 #32	ENSGT00950000182841.b.a.a.b.a.a.b.a.d #33	ENSGT00940000158650 #34	ENSGT00940000159102 #36	ENSGT00950000182990.a.a.a.b.u.b #37	ENSGT00950000182990.a.a.a.b.u.a ##37	ENSGT00950000182990.a.a.b.b ##37	ENSGT00520000061410	ENSGT00940000155807.a	ENSGT00390000010089.f	ENSGT00530000063626.a
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	401	Gng3 (ENSCGRG00001014012) #10	Bscl2 (ENSCGRG00001015829) #11	Lrrn4cl (ENSCGRG00001009869)	Ubxn1 (ENSCGRG00001006327) #12	Uqcc3 (ENSCGRG00001016702) #13	ENSCGRG00001017126 #14	1810009A15Rik (ENSCGRG00001020427) #15	Ints5 (ENSCGRG00001020963) #16	Ganab (ENSCGRG00001021832) #17	B3GAT3 (ENSCGRG00001023184)	Rom1 (ENSCGRG00001013656) #19	Eml3 (ENSCGRG00001015050) #18	Mta2 (ENSCGRG00001005728) #20	Tut1 (ENSCGRG00001017583) #21	ENSCGRG00001010100	ENSCGRG00001013631 #22	Ahnak (ENSCGRG00001009772) #23	Scgb1a1 (ENSCGRG00001017835) #24	Asrgl1 (ENSCGRG00001019390) #25	Scgb2a2 (ENSCGRG00001015765) #30	Incenp (ENSCGRG00001019028) #32	FTH1 (ENSCGRG00001020220) #33	ENSCGRG00001014139 #34	Rab3il1 (ENSCGRG00001015063) #36	Fads3 (ENSCGRG00001017095) #37	Fads2 (ENSCGRG00001013858) ##37	Fads1 (ENSCGRG00001018831) ##37	Fen1 (ENSCGRG00001009889)	ENSCGRG00001013240	Myrf (ENSCGRG00001021116)	Dagla (ENSCGRG00001004102)
Chinese hamster chok1gshd	MODERN SPECIES	17														ENSCGRG00001011185	Derl1 (ENSCGRG00001011500)	ENSCGRG00001011707 #22	Zhx2 (ENSCGRG00001013209)	ENSCGRG00001012456
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	682																ENSMAUG00000016675 #22	Htr1f (ENSMAUG00000006269)	Cggbp1 (ENSMAUG00000000993)	Zfp654 (ENSMAUG00000000720)	ENSMAUG00000012990	Csnka2ip (ENSMAUG00000001425)	Epha3 (ENSMAUG00000011923)	ENSMAUG00000020620	Stx19 (ENSMAUG00000004341)	Arl13b (ENSMAUG00000017043)	Nsun3 (ENSMAUG00000013661)	ENSMAUG00000000427	Epha6 (ENSMAUG00000005573)	Arl6 (ENSMAUG00000016932)	ENSMAUG00000003633	Riox2 (ENSMAUG00000015559)
Golden Hamster	MODERN SPECIES	658	Scg3 (ENSMAUG00000009353)	Lysmd2 (ENSMAUG00000006540)	Tmod2 (ENSMAUG00000010992)	Tmod3 (ENSMAUG00000016527)	Leo1 (ENSMAUG00000021013)	ENSMAUG00000002809	ENSMAUG00000007608	Gnb5 (ENSMAUG00000008570)	Myo5c (ENSMAUG00000019952)	Myo5a (ENSMAUG00000001195)	ENSMAUG00000013200	Atosa (ENSMAUG00000017090)	Onecut1 (ENSMAUG00000017863)	Wdr72 (ENSMAUG00000019773)	Unc13c (ENSMAUG00000014928)	ENSMAUG00000012949 #22	Rsl24d1 (ENSMAUG00000011146)	Rab27a (ENSMAUG00000013740)	Pigb (ENSMAUG00000009724)	Ccpg1 (ENSMAUG00000021179)	Pierce2 (ENSMAUG00000021207)	Dnaaf4 (ENSMAUG00000012975)	Pygo1 (ENSMAUG00000007751)	Prtg (ENSMAUG00000021146)	Nedd4 (ENSMAUG00000003802)	Rfx7 (ENSMAUG00000016583)	Tex9 (ENSMAUG00000004928)	Mns1 (ENSMAUG00000019303)	Zfp280d (ENSMAUG00000019648)
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	993	Hnrnpul2 (ENSNGAG00000012005)	Gng3 (ENSNGAG00000017324) #10	Bscl2 (ENSNGAG00000001576) #11	Lrrn4cl (ENSNGAG00000019480)	Ubxn1 (ENSNGAG00000019771) #12	Uqcc3 (ENSNGAG00000012681) #13	ENSNGAG00000013023	1810009A15Rik (ENSNGAG00000016918) #15	Ints5 (ENSNGAG00000020876) #16	Ganab (ENSNGAG00000001471) #17	B3gat3 (ENSNGAG00000011046)	Rom1 (ENSNGAG00000011407) #19	Eml3 (ENSNGAG00000020054) #18	Mta2 (ENSNGAG00000001070) #20	Tut1 (ENSNGAG00000002988) #21	ENSNGAG00000019856 #22	Ahnak (ENSNGAG00000010664) #23	Scgb1a1 (ENSNGAG00000015223) #24	Asrgl1 (ENSNGAG00000017941) #25
Upper Galilee mountains blind mole rat	MODERN SPECIES	832																ENSNGAG00000000678 #22	Tnrc6b (ENSNGAG00000021294)	Adsl (ENSNGAG00000016522)	Sgsm3 (ENSNGAG00000021377)	ENSNGAG00000019442	ENSNGAG00000012273