Laurasiatheria_c	ANCESTRAL SPECIES	20	ENSGT01100000263497.B #9	ENSGT00390000011639 #10	ENSGT00940000162696 #11	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00400000022873 #14	ENSGT00510000049875 #15	ENSGT00390000002615 #16	ENSGT00390000008374	ENSGT00940000159139 #17	ENSGT00940000156954 #18	ENSGT00940000159921 #19	ENSGT00940000159589 #20	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.b #23	ENSGT00940000155073.b #34	ENSGT00950000183045.A.a.a #25	ENSGT00390000013802 #28	ENSGT00530000063866 #26	ENSGT00730000111073	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b.u.b	ENSGT00950000182990.a.a.a.b.u.a	ENSGT00950000182990.a.a.b.b	ENSGT00520000061410	ENSGT00940000155807.a	ENSGT00390000010089.f
Equus	ANCESTRAL SPECIES	11	ENSGT01100000263497.B #9	ENSGT00390000011639 #10	ENSGT00940000162696 #11	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00400000022873 #14	ENSGT00510000049875 #15	ENSGT00390000002615 #16	ENSGT00390000008374	ENSGT00940000159139 #17	ENSGT00940000156954 #18	ENSGT00940000159921 #19	ENSGT00940000159589 #20	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.b #23	ENSGT00940000155073.b.b #34	ENSGT00950000183045.A.a.a.g #25	ENSGT00530000063866.k.a.a #26	ENSGT00390000013802.t.a #28	ENSGT00530000063866.k.a.b #30	ENSGT00530000063866.l #31	ENSGT00390000013802.t.b #32	ENSGT00950000183045.A.a.a.h #33	ENSGT00940000155073.b.a.a #35	ENSGT00530000063866.k.b.b #36	ENSGT00390000013802.s.b #37	ENSGT00390000013802.s.a ##28	ENSGT00530000063866.k.b.a ##26	ENSGT00730000111073
Horse	MODERN SPECIES	3	ENSECAG00000050506 #7	HNRNPUL2 (ENSECAG00000020298) #8	GNG3 (ENSECAG00000012185) #9	BSCL2 (ENSECAG00000018657) #10	LRRN4CL (ENSECAG00000005381) #11	UBXN1 (ENSECAG00000017404) #12	UQCC3 (ENSECAG00000017332) #13	LBHD1 (ENSECAG00000040586) #14	CSKMT (ENSECAG00000017322) #15	C11orf98 (ENSECAG00000055466) #16	GANAB (ENSECAG00000014477) #17	B3GAT3 (ENSECAG00000013416) #18	ROM1 (ENSECAG00000013399) #19	MTA2 (ENSECAG00000009847) #20	TUT1 (ENSECAG00000009471) #21	EEF1G (ENSECAG00000014334) #22	AHNAK (ENSECAG00000034383) #23	ENSECAG00000044462 #24	ASRGL1 (ENSECAG00000013093) #25	ENSECAG00000013056 #26	ENSECAG00000039162 #27	ENSECAG00000012203 #28	ENSECAG00000012519 #29	ENSECAG00000059472 #30	ENSECAG00000028903 #31	ENSECAG00000010565 #32	ENSECAG00000037231 #33	ENSECAG00000034235 #34	ENSECAG00000039036 #35	ENSECAG00000010614 #36	ENSECAG00000043238 #37
Donkey	MODERN SPECIES	8	HNRNPUL2 (ENSEASG00005011347) #8	GNG3 (ENSEASG00005026313) #9	BSCL2 (ENSEASG00005011244) #10	LRRN4CL (ENSEASG00005025754) #11	UBXN1 (ENSEASG00005011185) #12	UQCC3 (ENSEASG00005034303) #13	CSKMT (ENSEASG00005034678) #15	LBHD1 (ENSEASG00005030712) #14	INTS5 (ENSEASG00005011174)	GANAB (ENSEASG00005009472) #17	B3GAT3 (ENSEASG00005009313) #18	ROM1 (ENSEASG00005009310) #19	EML3 (ENSEASG00005009301) #20	MTA2 (ENSEASG00005007551)	TUT1 (ENSEASG00005007531) #21	EEF1G (ENSEASG00005007513) #22	ENSEASG00005032006 #34	ENSEASG00005026708 #23	ENSEASG00005030386 #25	ENSEASG00005034855 #26	ENSEASG00005033208 #28	ENSEASG00005004410 #30	ENSEASG00005025058 #31	ENSEASG00005004407 #32	ENSEASG00005007043 #33	ENSEASG00005019637 #35	ENSEASG00005028002	ENSEASG00005009090 #36	ENSEASG00005026123 #37	ENSEASG00005009091 ##28	ENSEASG00005036713 ##26
Chiroptera	ANCESTRAL SPECIES	14	ENSGT00940000160376 #8	ENSGT01100000263497.B #9	ENSGT00390000011639 #10	ENSGT00940000162696 #11	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00510000049875 #15	ENSGT00390000002615 #16	ENSGT00390000008374	ENSGT00940000159139 #17	ENSGT00940000156954 #18	ENSGT00940000159921 #19	ENSGT00940000159589 #20	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.b #23	ENSGT00940000155073.b #34	ENSGT00950000183045.A.a.a #25	ENSGT00390000013802 #28	ENSGT00730000111073.k	ENSGT00530000063866 #26	ENSGT00730000111073.l	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b.u.b	ENSGT00950000182990.a.a.a.b.u.a	ENSGT00950000182990.a.a.b.b	ENSGT00520000061410	ENSGT00940000155807.a
Megabat	MODERN SPECIES	2880	HNRNPUL2 (ENSPVAG00000003475) #8	GNG3 (ENSPVAG00000003474) #9	BSCL2 (ENSPVAG00000003473) #10	LRRN4CL (ENSPVAG00000003472) #11	UBXN1 (ENSPVAG00000003470) #12	UQCC3 (ENSPVAG00000003469) #13	CSKMT (ENSPVAG00000003467) #15	LBHD1 (ENSPVAG00000003464) #14	INTS5 (ENSPVAG00000003463)	GANAB (ENSPVAG00000003458) #17	B3GAT3 (ENSPVAG00000003456) #18	ROM1 (ENSPVAG00000003455) #19	EML3 (ENSPVAG00000003451) #20	MTA2 (ENSPVAG00000003447)	TUT1 (ENSPVAG00000003444) #21	EEF1G (ENSPVAG00000003440) #22
Microchiroptera	ANCESTRAL SPECIES	13	ENSGT00940000160376 #8	ENSGT01100000263497.B #9	ENSGT00390000011639 #10	ENSGT00940000162696 #11	ENSGT00940000156457 #12	ENSGT00390000001930 #13	ENSGT00510000049875 #15	ENSGT00390000002615 #16	ENSGT00390000008374	ENSGT00940000159139 #17	ENSGT00940000156954 #18	ENSGT00940000159921 #19	ENSGT00940000159589 #20	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914 #21	ENSGT00390000007552.f #22	ENSGT00940000154902.bb.b #23	ENSGT00940000155073.b #34	ENSGT00950000183045.A.a.a #25	ENSGT00390000013802 #28	ENSGT00730000111073.l	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b.u.b	ENSGT00950000182990.a.a.a.b.u.a	ENSGT00950000182990.a.a.b.b	ENSGT00520000061410	ENSGT00940000155807.a	ENSGT00390000010089.f	ENSGT00530000063626.a	ENSGT00940000161192
Microbat	MODERN SPECIES	1654	ENSMLUG00000011039	ZBTB3 (ENSMLUG00000011020)	TTC9C (ENSMLUG00000010981) #7	HNRNPUL2 (ENSMLUG00000000412) #8	BSCL2 (ENSMLUG00000024511) #10	UQCC3 (ENSMLUG00000024698) #13	UBXN1 (ENSMLUG00000000406) #12	CSKMT (ENSMLUG00000023559) #15	C11orf98 (ENSMLUG00000000396) #16	INTS5 (ENSMLUG00000000391)	GANAB (ENSMLUG00000000384) #17	B3GAT3 (ENSMLUG00000000383) #18	EML3 (ENSMLUG00000000365) #20	MTA2 (ENSMLUG00000000357)	TUT1 (ENSMLUG00000000349) #21	EEF1G (ENSMLUG00000000342) #22	AHNAK (ENSMLUG00000006351) #23
Greater horseshoe bat	MODERN SPECIES	2	HNRNPUL2 (ENSRFEG00010012436) #8	GNG3 (ENSRFEG00010012628) #9	BSCL2 (ENSRFEG00010012669) #10	LRRN4CL (ENSRFEG00010012818) #11	UBXN1 (ENSRFEG00010012842) #12	UQCC3 (ENSRFEG00010012979) #13	CSKMT (ENSRFEG00010013001) #15	C11orf98 (ENSRFEG00010013053) #16	INTS5 (ENSRFEG00010013105)	GANAB (ENSRFEG00010013176) #17	B3GAT3 (ENSRFEG00010013706) #18	ROM1 (ENSRFEG00010013764) #19	EML3 (ENSRFEG00010013823) #20	MTA2 (ENSRFEG00010013987)	TUT1 (ENSRFEG00010014303) #21	EEF1G (ENSRFEG00010014387) #22	AHNAK (ENSRFEG00010014569) #23	SCGB1A1 (ENSRFEG00010014646) #34	ASRGL1 (ENSRFEG00010014743) #25	ENSRFEG00010014886 #28	ENSRFEG00010014944 #28	ENSRFEG00010015100 #28	INCENP (ENSRFEG00010015121)	ENSRFEG00010015154	RAB3IL1 (ENSRFEG00010015301)	FADS1 (ENSRFEG00010015439)	FADS2 (ENSRFEG00010000561)	ENSRFEG00010000627	FEN1 (ENSRFEG00010000639)	ENSRFEG00010000644	MYRF (ENSRFEG00010000719)