Amniota	ANCESTRAL SPECIES	22	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00940000158931 #35
Mammalia	ANCESTRAL SPECIES	18	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00940000158931 #35
Theria	ANCESTRAL SPECIES	39	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Eutheria	ANCESTRAL SPECIES	14	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Primates	ANCESTRAL SPECIES	1	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000160568.n #36
Lemuriformes	ANCESTRAL SPECIES	17	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00550000074807.d	ENSGT00940000163080	ENSGT00940000162391	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Lemuriformes_a	ANCESTRAL SPECIES	6	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00980000198877 #15	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00550000074807.d	ENSGT00940000163080	ENSGT00940000162391	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Greater bamboo lemur	MODERN SPECIES	949	NICN1 (ENSPSMG00000026013) #7	AMT (ENSPSMG00000026012) #8	TCTA (ENSPSMG00000026011) #9	RHOA (ENSPSMG00000026009) #10	GPX1 (ENSPSMG00000026008) #11	ENSPSMG00000026006 #12	USP4 (ENSPSMG00000026005) #13	C3orf62 (ENSPSMG00000026004) #14	ENSPSMG00000026003 #15	C3orf84 (ENSPSMG00000026002) #16	KLHDC8B (ENSPSMG00000026001) #17	CCDC71 (ENSPSMG00000026000) #18	LAMB2 (ENSPSMG00000025999) #19	USP19 (ENSPSMG00000025998) #20	QARS1 (ENSPSMG00000025997) #21	QRICH1 (ENSPSMG00000025996) #22	NDUFAF3 (ENSPSMG00000025995) #23	DALRD3 (ENSPSMG00000025993) #24	WDR6 (ENSPSMG00000025992) #25	P4HTM (ENSPSMG00000025991) #26	ARIH2 (ENSPSMG00000025990) #27	SLC25A20 (ENSPSMG00000025989) #28	PRKAR2A (ENSPSMG00000025988) #29	IP6K2 (ENSPSMG00000025987) #30	NCKIPSD (ENSPSMG00000025986) #31	CELSR3 (ENSPSMG00000025984) #32	SLC26A6 (ENSPSMG00000025983) #33	TMEM89 (ENSPSMG00000025982) #34	UQCRC1 (ENSPSMG00000025981) #35	UCN2 (ENSPSMG00000025980) #36	PFKFB4 (ENSPSMG00000025979) #37
Coquerels sifaka	MODERN SPECIES	50	BSN (ENSPCOG00000025030)	DAG1 (ENSPCOG00000023915)	NICN1 (ENSPCOG00000021271) #7	AMT (ENSPCOG00000016597) #8	TCTA (ENSPCOG00000018175) #9	RHOA (ENSPCOG00000014495) #10	GPX1 (ENSPCOG00000023726) #11	USP4 (ENSPCOG00000023286) #13	C3orf62 (ENSPCOG00000027475) #14	ENSPCOG00000023086 #15	C3orf84 (ENSPCOG00000019596) #16	KLHDC8B (ENSPCOG00000005585) #17	LAMB2 (ENSPCOG00000003248) #19	USP19 (ENSPCOG00000021600) #20	QARS1 (ENSPCOG00000022610) #21	QRICH1 (ENSPCOG00000028140) #22	IMPDH2 (ENSPCOG00000027001)	NDUFAF3 (ENSPCOG00000014463) #23	DALRD3 (ENSPCOG00000027419) #24	WDR6 (ENSPCOG00000018888) #25	P4HTM (ENSPCOG00000006504) #26	ARIH2 (ENSPCOG00000019150) #27	SLC25A20 (ENSPCOG00000028137) #28	ENSPCOG00000028707	PRKAR2A (ENSPCOG00000028683) #29	IP6K2 (ENSPCOG00000021856) #30	NCKIPSD (ENSPCOG00000008716) #31	CELSR3 (ENSPCOG00000025025) #32	SLC26A6 (ENSPCOG00000017202) #33	TMEM89 (ENSPCOG00000024176) #34	UQCRC1 (ENSPCOG00000013339) #35
Mouse lemur	MODERN SPECIES	5	DAG1 (ENSMICG00000010618)	NICN1 (ENSMICG00000001261) #7	AMT (ENSMICG00000001251) #8	TCTA (ENSMICG00000043725) #9	RHOA (ENSMICG00000032818) #10	GPX1 (ENSMICG00000034931) #11	USP4 (ENSMICG00000043936) #13	C3orf62 (ENSMICG00000044230) #14	IHO1 (ENSMICG00000029553)	C3orf84 (ENSMICG00000026553) #16	KLHDC8B (ENSMICG00000007972) #17	CCDC71 (ENSMICG00000034099) #18	LAMB2 (ENSMICG00000007913) #19	USP19 (ENSMICG00000007895) #20	QARS1 (ENSMICG00000007885) #21	QRICH1 (ENSMICG00000028751) #22	IMPDH2 (ENSMICG00000007866)	NDUFAF3 (ENSMICG00000007862) #23	DALRD3 (ENSMICG00000007858) #24	WDR6 (ENSMICG00000007852) #25	P4HTM (ENSMICG00000007843) #26	ARIH2 (ENSMICG00000007837) #27	SLC25A20 (ENSMICG00000005028) #28	ENSMICG00000032432	PRKAR2A (ENSMICG00000001067) #29	ENSMICG00000034139	IP6K2 (ENSMICG00000014451) #30	NCKIPSD (ENSMICG00000030986) #31	CELSR3 (ENSMICG00000014363) #32	SLC26A6 (ENSMICG00000027204) #33	TMEM89 (ENSMICG00000046701) #34
Bushbaby	MODERN SPECIES	294	NICN1 (ENSOGAG00000001885) #7	AMT (ENSOGAG00000001884) #8	TCTA (ENSOGAG00000001882) #9	ENSOGAG00000028489	GPX1 (ENSOGAG00000001880) #11	USP4 (ENSOGAG00000001877) #13	C3orf62 (ENSOGAG00000001876) #14	ENSOGAG00000029272	IHO1 (ENSOGAG00000029823)	ENSOGAG00000034043	KLHDC8B (ENSOGAG00000003967) #17	CCDC71 (ENSOGAG00000015471) #18	LAMB2 (ENSOGAG00000003963) #19	USP19 (ENSOGAG00000003957) #20	QARS1 (ENSOGAG00000003954) #21	QRICH1 (ENSOGAG00000033740) #22	IMPDH2 (ENSOGAG00000003945)	NDUFAF3 (ENSOGAG00000003941) #23	DALRD3 (ENSOGAG00000003937) #24	WDR6 (ENSOGAG00000003935) #25	P4HTM (ENSOGAG00000003931) #26	ARIH2 (ENSOGAG00000002263) #27	SLC25A20 (ENSOGAG00000001847) #28	PRKAR2A (ENSOGAG00000006822) #29	IP6K2 (ENSOGAG00000006819) #30	NCKIPSD (ENSOGAG00000031535) #31	CELSR3 (ENSOGAG00000006801) #32	SLC26A6 (ENSOGAG00000032822) #33	UQCRC1 (ENSOGAG00000008638) #35	ENSOGAG00000014351	PFKFB4 (ENSOGAG00000014344) #37
Haplorrhini	ANCESTRAL SPECIES	5	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00910000147634	ENSGT00940000154875.k #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000164003	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00910000147634	ENSGT00940000154875.k.a #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00910000147634	ENSGT00940000154875.k.a #27	ENSGT00390000009949	ENSGT00940000157863.g #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00910000147634	ENSGT00940000154875.k.a #27	ENSGT00390000009949	ENSGT00940000157863.g #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Vervet Monkey	MODERN SPECIES	14	BSN (ENSCSAG00000014973)	DAG1 (ENSCSAG00000014979)	NICN1 (ENSCSAG00000014988) #7	AMT (ENSCSAG00000015048) #8	TCTA (ENSCSAG00000015067) #9	RHOA (ENSCSAG00000015074) #10	GPX1 (ENSCSAG00000015079) #11	USP4 (ENSCSAG00000015089) #13	C3orf62 (ENSCSAG00000015100) #14	IHO1 (ENSCSAG00000015114)	C3orf84 (ENSCSAG00000015128) #16	KLHDC8B (ENSCSAG00000015133) #17	LAMB2 (ENSCSAG00000015160) #19	USP19 (ENSCSAG00000015179) #20	QARS1 (ENSCSAG00000015198) #21	QRICH1 (ENSCSAG00000015224) #22	IMPDH2 (ENSCSAG00000015243)	NDUFAF3 (ENSCSAG00000015235) #23	DALRD3 (ENSCSAG00000015253) #24	WDR6 (ENSCSAG00000015270) #25	P4HTM (ENSCSAG00000015286) #26	ARIH2 (ENSCSAG00000015355) #27	SLC25A20 (ENSCSAG00000015383) #28	PRKAR2A (ENSCSAG00000015391) #29	IP6K2 (ENSCSAG00000015398) #30	NCKIPSD (ENSCSAG00000015406) #31	CELSR3 (ENSCSAG00000015477) #32	SLC26A6 (ENSCSAG00000015510) #33	TMEM89 (ENSCSAG00000015523) #34	UQCRC1 (ENSCSAG00000015535) #35	COL7A1 (ENSCSAG00000015684)
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00910000147634	ENSGT00940000154875.k.a #27	ENSGT00390000009949	ENSGT00940000157863.g #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Macaca	ANCESTRAL SPECIES	5	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00940000154612.n.gb	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875.k.a #27	ENSGT00390000009949	ENSGT00940000157863.g #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Pig-tailed macaque	MODERN SPECIES	563	NICN1 (ENSMNEG00000028099) #7	AMT (ENSMNEG00000044694) #8	TCTA (ENSMNEG00000029672) #9	RHOA (ENSMNEG00000042186) #10	GPX1 (ENSMNEG00000043723) #11	USP4 (ENSMNEG00000036652) #13	C3orf62 (ENSMNEG00000041595) #14	ENSMNEG00000030741	IHO1 (ENSMNEG00000041960)	ENSMNEG00000040259	C3orf84 (ENSMNEG00000040997) #16	KLHDC8B (ENSMNEG00000033867) #17	LAMB2 (ENSMNEG00000044894) #19	USP19 (ENSMNEG00000033317) #20	QARS1 (ENSMNEG00000035096) #21	QRICH1 (ENSMNEG00000029906) #22	ENSMNEG00000014164	IMPDH2 (ENSMNEG00000036421)	NDUFAF3 (ENSMNEG00000033547) #23	DALRD3 (ENSMNEG00000043361) #24	WDR6 (ENSMNEG00000044323) #25	P4HTM (ENSMNEG00000036306) #26	ARIH2 (ENSMNEG00000040123) #27	ENSMNEG00000037742	SLC25A20 (ENSMNEG00000039918) #28	PRKAR2A (ENSMNEG00000029768) #29	IP6K2 (ENSMNEG00000043825) #30	NCKIPSD (ENSMNEG00000020586) #31	CELSR3 (ENSMNEG00000045011) #32	SLC26A6 (ENSMNEG00000043190) #33	TMEM89 (ENSMNEG00000016776) #34
Macaca_a	ANCESTRAL SPECIES	5	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00940000154612.n.gb	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00910000146976	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875.k.a #27	ENSGT00940000157863.g #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Rhesus	MODERN SPECIES	11	NICN1 (ENSMMUG00000031780) #7	AMT (ENSMMUG00000005452) #8	TCTA (ENSMMUG00000058903) #9	RHOA (ENSMMUG00000047476) #10	GPX1 (ENSMMUG00000012963) #11	C2H3orf62 (ENSMMUG00000049541) #14	USP4 (ENSMMUG00000000822) #13	IHO1 (ENSMMUG00000053526)	ENSMMUG00000062159	C2H3orf84 (ENSMMUG00000046787) #16	KLHDC8B (ENSMMUG00000002833) #17	CCDC71 (ENSMMUG00000002836) #18	LAMB2 (ENSMMUG00000002952) #19	USP19 (ENSMMUG00000002948) #20	QARS1 (ENSMMUG00000002943) #21	QRICH1 (ENSMMUG00000005660) #22	IMPDH2 (ENSMMUG00000005656)	NDUFAF3 (ENSMMUG00000058322) #23	DALRD3 (ENSMMUG00000005652) #24	WDR6 (ENSMMUG00000005649) #25	P4HTM (ENSMMUG00000006130) #26	ARIH2 (ENSMMUG00000039597) #27	SLC25A20 (ENSMMUG00000015418) #28	PRKAR2A (ENSMMUG00000000081) #29	IP6K2 (ENSMMUG00000014730) #30	NCKIPSD (ENSMMUG00000014720) #31	CELSR3 (ENSMMUG00000014707) #32	SLC26A6 (ENSMMUG00000031754) #33	TMEM89 (ENSMMUG00000055005) #34	UQCRC1 (ENSMMUG00000014705) #35	UCN2 (ENSMMUG00000059318) #36
Crab-eating macaque	MODERN SPECIES	11	NICN1 (ENSMFAG00000044679) #7	AMT (ENSMFAG00000003688) #8	TCTA (ENSMFAG00000003146) #9	RHOA (ENSMFAG00000036093) #10	GPX1 (ENSMFAG00000035887) #11	C3orf62 (ENSMFAG00000053457) #14	USP4 (ENSMFAG00000043326) #13	IHO1 (ENSMFAG00000043646)	ENSMFAG00000058702	C3orf84 (ENSMFAG00000053517) #16	KLHDC8B (ENSMFAG00000044788) #17	CCDC71 (ENSMFAG00000056130) #18	LAMB2 (ENSMFAG00000030537) #19	USP19 (ENSMFAG00000040355) #20	QARS1 (ENSMFAG00000033478) #21	QRICH1 (ENSMFAG00000030312) #22	IMPDH (ENSMFAG00000044947)	ENSMFAG00000061406	NDUFAF3 (ENSMFAG00000046307) #23	DALRD3 (ENSMFAG00000009642) #24	WDR6 (ENSMFAG00000037294) #25	P4HTM (ENSMFAG00000037567) #26	ARIH2 (ENSMFAG00000000139) #27	SLC25A20 (ENSMFAG00000037674) #28	PRKAR2A (ENSMFAG00000045665) #29	IP6K2 (ENSMFAG00000031559) #30	NCKIPSD (ENSMFAG00000031042) #31	CELSR3 (ENSMFAG00000045461) #32	SLC26A6 (ENSMFAG00000034657) #33	TMEM89 (ENSMFAG00000041206) #34	UQCRC1 (ENSMFAG00000041533) #35
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00910000147634	ENSGT00940000154875.k.a #27	ENSGT00390000009949	ENSGT00940000157863.g #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Olive baboon	MODERN SPECIES	11	RASSF1 (ENSPANG00000016900)	ZMYND10 (ENSPANG00000012439)	NPRL2 (ENSPANG00000009525)	CYB561D2 (ENSPANG00000008258)	TMEM115 (ENSPANG00000026398)	GPX1 (ENSPANG00000029358) #11	USP4 (ENSPANG00000019009) #13	C3orf62 (ENSPANG00000024952) #14	IHO1 (ENSPANG00000010030)	C3orf84 (ENSPANG00000010290) #16	KLHDC8B (ENSPANG00000022042) #17	CCDC71 (ENSPANG00000006140) #18	LAMB2 (ENSPANG00000016084) #19	USP19 (ENSPANG00000008390) #20	QARS1 (ENSPANG00000016987) #21	QRICH1 (ENSPANG00000015576) #22	IMPDH2 (ENSPANG00000007209)	NDUFAF3 (ENSPANG00000009002) #23	DALRD3 (ENSPANG00000007062) #24	WDR6 (ENSPANG00000015575) #25	P4HTM (ENSPANG00000022971) #26	ARIH2 (ENSPANG00000016339) #27	SLC25A20 (ENSPANG00000003132) #28	ENSPANG00000051118	PRKAR2A (ENSPANG00000012986) #29	IP6K2 (ENSPANG00000015976) #30	NCKIPSD (ENSPANG00000018329) #31	CELSR3 (ENSPANG00000013159) #32	SLC26A6 (ENSPANG00000020587) #33	TMEM89 (ENSPANG00000018455) #34	UQCRC1 (ENSPANG00000015008) #35
Cercopithecinae_d	ANCESTRAL SPECIES	44	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00910000147634	ENSGT00940000154875.k.a #27	ENSGT00390000009949	ENSGT00940000157863.g #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Sooty mangabey	MODERN SPECIES	415	NICN1 (ENSCATG00000032696) #7	AMT (ENSCATG00000040549) #8	TCTA (ENSCATG00000029652) #9	RHOA (ENSCATG00000018066) #10	GPX1 (ENSCATG00000012563) #11	USP4 (ENSCATG00000038050) #13	C3orf62 (ENSCATG00000038289) #14	ENSCATG00000040412	IHO1 (ENSCATG00000030087)	C3orf84 (ENSCATG00000044627) #16	KLHDC8B (ENSCATG00000038940) #17	CCDC71 (ENSCATG00000039714) #18	LAMB2 (ENSCATG00000045276) #19	USP19 (ENSCATG00000041103) #20	QARS1 (ENSCATG00000037275) #21	QRICH1 (ENSCATG00000030540) #22	ENSCATG00000040928	IMPDH2 (ENSCATG00000030723)	NDUFAF3 (ENSCATG00000039806) #23	DALRD3 (ENSCATG00000030159) #24	WDR6 (ENSCATG00000029974) #25	P4HTM (ENSCATG00000030517) #26	ARIH2 (ENSCATG00000008575) #27	ENSCATG00000038373	SLC25A20 (ENSCATG00000033267) #28	PRKAR2A (ENSCATG00000040692) #29	IP6K2 (ENSCATG00000029664) #30	NCKIPSD (ENSCATG00000018616) #31	CELSR3 (ENSCATG00000037520) #32	SLC26A6 (ENSCATG00000039384) #33	TMEM89 (ENSCATG00000043281) #34
Drill	MODERN SPECIES	806	DAG1 (ENSMLEG00000034072)	NICN1 (ENSMLEG00000016079) #7	AMT (ENSMLEG00000034972) #8	TCTA (ENSMLEG00000038364) #9	RHOA (ENSMLEG00000038343) #10	GPX1 (ENSMLEG00000037976) #11	USP4 (ENSMLEG00000041312) #13	C3orf62 (ENSMLEG00000044233) #14	ENSMLEG00000006991	IHO1 (ENSMLEG00000043657)	C3orf84 (ENSMLEG00000037676) #16	KLHDC8B (ENSMLEG00000040348) #17	LAMB2 (ENSMLEG00000037084) #19	USP19 (ENSMLEG00000026259) #20	QARS1 (ENSMLEG00000042334) #21	QRICH1 (ENSMLEG00000030523) #22	IMPDH2 (ENSMLEG00000038550)	NDUFAF3 (ENSMLEG00000038523) #23	DALRD3 (ENSMLEG00000040883) #24	WDR6 (ENSMLEG00000037052) #25	P4HTM (ENSMLEG00000034731) #26	ENSMLEG00000004260	ARIH2 (ENSMLEG00000044349) #27	ENSMLEG00000036827	SLC25A20 (ENSMLEG00000040319) #28	ENSMLEG00000039329 #29	IP6K2 (ENSMLEG00000029359) #30	NCKIPSD (ENSMLEG00000031325) #31	CELSR3 (ENSMLEG00000034854) #32	SLC26A6 (ENSMLEG00000006862) #33	TMEM89 (ENSMLEG00000030848) #34
Rhinopithecus	ANCESTRAL SPECIES	41	ENSGT00390000008429	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150.c #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00910000147634	ENSGT00940000154875.k.a #27	ENSGT00390000009949	ENSGT00940000157863.g #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Golden snub-nosed monkey	MODERN SPECIES	656	DAG1 (ENSRROG00000042606)	NICN1 (ENSRROG00000035488) #7	AMT (ENSRROG00000031575) #8	TCTA (ENSRROG00000038446) #9	RHOA (ENSRROG00000031894) #10	ENSRROG00000031817 #11	USP4 (ENSRROG00000037639) #13	C3orf62 (ENSRROG00000025217) #14	ENSRROG00000029834	IHO1 (ENSRROG00000039947)	C3orf84 (ENSRROG00000044252) #16	KLHDC8B (ENSRROG00000031709) #17	LAMB2 (ENSRROG00000036637) #19	USP19 (ENSRROG00000034752) #20	QARS1 (ENSRROG00000034983) #21	QRICH1 (ENSRROG00000044579) #22	IMPDH2 (ENSRROG00000004338)	NDUFAF3 (ENSRROG00000034732) #23	ENSRROG00000038492	DALRD3 (ENSRROG00000038168) #24	WDR6 (ENSRROG00000033452) #25	P4HTM (ENSRROG00000032082) #26	ARIH2 (ENSRROG00000038192) #27	ENSRROG00000035582	ENSRROG00000037514	SLC25A20 (ENSRROG00000032888) #28	PRKAR2A (ENSRROG00000042248) #29	IP6K2 (ENSRROG00000031159) #30	NCKIPSD (ENSRROG00000031277) #31	CELSR3 (ENSRROG00000037263) #32	SLC26A6 (ENSRROG00000041348) #33
Black snub-nosed monkey	MODERN SPECIES	238	NICN1 (ENSRBIG00000027144) #7	AMT (ENSRBIG00000041194) #8	TCTA (ENSRBIG00000033807) #9	ENSRBIG00000005780	ENSRBIG00000044204 #10	ENSRBIG00000038215 #11	USP4 (ENSRBIG00000038187) #13	C3orf62 (ENSRBIG00000037968) #14	ENSRBIG00000033062	IHO1 (ENSRBIG00000038941)	C3orf84 (ENSRBIG00000033269) #16	KLHDC8B (ENSRBIG00000044493) #17	LAMB2 (ENSRBIG00000035222) #19	USP19 (ENSRBIG00000034712) #20	QARS1 (ENSRBIG00000030327) #21	QRICH1 (ENSRBIG00000020566) #22	IMPDH2 (ENSRBIG00000036996)	ENSRBIG00000035262	NDUFAF3 (ENSRBIG00000038471) #23	DALRD3 (ENSRBIG00000042882) #24	WDR6 (ENSRBIG00000028469) #25	P4HTM (ENSRBIG00000043214) #26	ARIH2 (ENSRBIG00000042561) #27	ENSRBIG00000039456	ENSRBIG00000034860	SLC25A20 (ENSRBIG00000040981) #28	PRKAR2A (ENSRBIG00000014609) #29	IP6K2 (ENSRBIG00000029421) #30	NCKIPSD (ENSRBIG00000030647) #31	CELSR3 (ENSRBIG00000033717) #32	SLC26A6 (ENSRBIG00000044752) #33
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150.b #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875.k.a #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Hominidae	ANCESTRAL SPECIES	2	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150.b #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875.k.a #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150.b.a.a #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875.k.a #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Gorilla	MODERN SPECIES	16	NICN1 (ENSGGOG00000007674) #7	ENSGGOG00000040183 #8	ENSGGOG00000040331	ENSGGOG00000012843	ENSGGOG00000012839 #11	ENSGGOG00000004591 #13	C3orf62 (ENSGGOG00000038583) #14	ENSGGOG00000028172	IHO1 (ENSGGOG00000000568)	ENSGGOG00000022187 #16	KLHDC8B (ENSGGOG00000006719) #17	CCDC71 (ENSGGOG00000026469) #18	LAMB2 (ENSGGOG00000014907) #19	USP19 (ENSGGOG00000014895) #20	QARS1 (ENSGGOG00000014882) #21	QRICH1 (ENSGGOG00000013251) #22	ENSGGOG00000044223	IMPDH (ENSGGOG00000013245)	NDUFAF3 (ENSGGOG00000013240) #23	DALRD3 (ENSGGOG00000001269) #24	WDR6 (ENSGGOG00000001268) #25	P4HTM (ENSGGOG00000017137) #26	ARIH2 (ENSGGOG00000017134) #27	ENSGGOG00000002053	SLC25A20 (ENSGGOG00000028046) #28	PRKAR2A (ENSGGOG00000009195) #29	IP6K2 (ENSGGOG00000016731) #30	NCKIPSD (ENSGGOG00000016717) #31	CELSR3 (ENSGGOG00000016683) #32	SLC26A6 (ENSGGOG00000028058) #33	TMEM89 (ENSGGOG00000003721) #34
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150.b.a.a #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875.k.a #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Pan	ANCESTRAL SPECIES	2	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00980000199418	ENSGT00950000182945.b.b #10	ENSGT00940000156150.b.a.a #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875.k.a #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Chimpanzee	MODERN SPECIES	16	NICN1 (ENSPTRG00000032494) #7	AMT (ENSPTRG00000014924) #8	TCTA (ENSPTRG00000014923)	RHOA (ENSPTRG00000014922) #10	GPX1 (ENSPTRG00000014921) #11	USP4 (ENSPTRG00000014920) #13	C3H3orf62 (ENSPTRG00000038744) #14	ENSPTRG00000038743	IHO1 (ENSPTRG00000014915)	C3H3orf84 (ENSPTRG00000050096) #16	KLHDC8B (ENSPTRG00000014914) #17	CCDC71 (ENSPTRG00000014913) #18	LAMB2 (ENSPTRG00000014912) #19	USP19 (ENSPTRG00000014911) #20	QARS1 (ENSPTRG00000014910) #21	QRICH1 (ENSPTRG00000023070) #22	ENSPTRG00000052442	IMPDH2 (ENSPTRG00000014908)	NDUFAF3 (ENSPTRG00000014907) #23	DALRD3 (ENSPTRG00000043430) #24	WDR6 (ENSPTRG00000014905) #25	P4HTM (ENSPTRG00000014903) #26	ARIH2 (ENSPTRG00000014902) #27	ENSPTRG00000038713	SLC25A20 (ENSPTRG00000014900) #28	PRKAR2A (ENSPTRG00000014898) #29	IP6K2 (ENSPTRG00000014897) #30	NCKIPSD (ENSPTRG00000033842) #31	CELSR3 (ENSPTRG00000014895) #32	SLC26A6 (ENSPTRG00000038807) #33	TMEM89 (ENSPTRG00000014893) #34
Bonobo	MODERN SPECIES	16	BSN (ENSPPAG00000037774)	DAG1 (ENSPPAG00000035837)	NICN1 (ENSPPAG00000029365) #7	AMT (ENSPPAG00000038969) #8	ENSPPAG00000041505	ENSPPAG00000031493 #10	ENSPPAG00000041840 #11	USP4 (ENSPPAG00000030591) #13	C3orf62 (ENSPPAG00000034256) #14	ENSPPAG00000028818	IHO1 (ENSPPAG00000041728)	C3orf84 (ENSPPAG00000028447) #16	KLHDC8B (ENSPPAG00000043715) #17	LAMB2 (ENSPPAG00000034500) #19	USP19 (ENSPPAG00000042808) #20	QRICH1 (ENSPPAG00000028104) #22	ENSPPAG00000040709	IMPDH2 (ENSPPAG00000028755)	NDUFAF3 (ENSPPAG00000037616) #23	DALRD3 (ENSPPAG00000037268) #24	WDR6 (ENSPPAG00000043035) #25	P4HTM (ENSPPAG00000034922) #26	ARIH2 (ENSPPAG00000037928) #27	ENSPPAG00000018979	SLC25A20 (ENSPPAG00000032464) #28	PRKAR2A (ENSPPAG00000032093) #29	IP6K2 (ENSPPAG00000027364) #30	NCKIPSD (ENSPPAG00000011360) #31	CELSR3 (ENSPPAG00000031153) #32	SLC26A6 (ENSPPAG00000027870) #33	TMEM89 (ENSPPAG00000043138) #34
Human	MODERN SPECIES	15	AMT (ENSG00000145020) #8	ENSG00000283189	TCTA (ENSG00000145022) #9	RHOA (ENSG00000067560) #10	ENSG00000290318	GPX1 (ENSG00000233276) #11	USP4 (ENSG00000114316) #13	C3orf62 (ENSG00000188315) #14	IHO1 (ENSG00000173421)	C3orf84 (ENSG00000236980) #16	KLHDC8B (ENSG00000185909) #17	CCDC71 (ENSG00000177352) #18	LAMB2 (ENSG00000172037) #19	USP19 (ENSG00000172046) #20	QARS1 (ENSG00000172053) #21	QRICH1 (ENSG00000198218) #22	ENSG00000290315	IMPDH2 (ENSG00000178035)	NDUFAF3 (ENSG00000178057) #23	DALRD3 (ENSG00000178149) #24	WDR6 (ENSG00000178252) #25	P4HTM (ENSG00000178467) #26	ARIH2 (ENSG00000177479) #27	SLC25A20 (ENSG00000178537) #28	PRKAR2A (ENSG00000114302) #29	IP6K2 (ENSG00000068745) #30	NCKIPSD (ENSG00000213672) #31	CELSR3 (ENSG00000008300) #32	SLC26A6 (ENSG00000225697) #33	TMEM89 (ENSG00000183396) #34	UQCRC1 (ENSG00000010256) #35
Orangutan	MODERN SPECIES	16	BSN (ENSPPYG00000013869)	DAG1 (ENSPPYG00000013870)	AMT (ENSPPYG00000013871) #8	NICN1 (ENSPPYG00000040178) #7	TCTA (ENSPPYG00000013872)	RHOA (ENSPPYG00000013873) #10	GPX1 (ENSPPYG00000025896) #11	USP4 (ENSPPYG00000013874) #13	C3orf62 (ENSPPYG00000040660) #14	IHO1 (ENSPPYG00000013877)	C3orf84 (ENSPPYG00000032258) #16	KLHDC8B (ENSPPYG00000013878) #17	CCDC71 (ENSPPYG00000013879) #18	USP19 (ENSPPYG00000013881) #20	QARS1 (ENSPPYG00000013882) #21	QRICH1 (ENSPPYG00000013883) #22	IMPDH2 (ENSPPYG00000013884)	NDUFAF3 (ENSPPYG00000013885) #23	DALRD3 (ENSPPYG00000013886) #24	WDR6 (ENSPPYG00000013887) #25	P4HTM (ENSPPYG00000036915) #26	ENSPPYG00000034737	ARIH2 (ENSPPYG00000013890) #27	SLC25A20 (ENSPPYG00000013892) #28	PRKAR2A (ENSPPYG00000013894) #29	IP6K2 (ENSPPYG00000013895) #30	NCKIPSD (ENSPPYG00000029864) #31	CELSR3 (ENSPPYG00000036651) #32	SLC26A6 (ENSPPYG00000013896) #33	ENSPPYG00000013897 #34	UQCRC1 (ENSPPYG00000013898) #35
Gibbon	MODERN SPECIES	19	DAG1 (ENSNLEG00000006853)	NICN1 (ENSNLEG00000006851) #7	AMT (ENSNLEG00000029101) #8	ENSNLEG00000006843	RHOA (ENSNLEG00000006839) #10	ENSNLEG00000028108 #11	USP4 (ENSNLEG00000006829) #13	C3orf62 (ENSNLEG00000006828) #14	ENSNLEG00000006827	IHO1 (ENSNLEG00000006825)	C3orf84 (ENSNLEG00000006823) #16	KLHDC8B (ENSNLEG00000006819) #17	LAMB2 (ENSNLEG00000006812) #19	USP19 (ENSNLEG00000006789) #20	ENSNLEG00000006772 #21	QRICH1 (ENSNLEG00000006752) #22	IMPDH2 (ENSNLEG00000006743)	ENSNLEG00000027818	NDUFAF3 (ENSNLEG00000006739) #23	ENSNLEG00000006730 #24	WDR6 (ENSNLEG00000006728) #25	P4HTM (ENSNLEG00000006725) #26	ARIH2 (ENSNLEG00000006710) #27	SLC25A20 (ENSNLEG00000028002) #28	PRKAR2A (ENSNLEG00000030036) #29	IP6K2 (ENSNLEG00000006680) #30	NCKIPSD (ENSNLEG00000006672) #31	CELSR3 (ENSNLEG00000006656) #32	SLC26A6 (ENSNLEG00000006623) #33	TMEM89 (ENSNLEG00000006620) #34	UQCRC1 (ENSNLEG00000006581) #35
Platyrrhini	ANCESTRAL SPECIES	18	ENSGT00390000001505.a.b #7	ENSGT00390000001505.a.a #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150.f #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972.e #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00910000147634	ENSGT00940000154875.k #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836.h #29	ENSGT00940000154836.g.b #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32
Cebidae	ANCESTRAL SPECIES	14	ENSGT00910000147297	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150.f.b #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972.e #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00910000147634	ENSGT00940000154875.k #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836.h #29	ENSGT00940000154836.g.b #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32
Cebidae_a	ANCESTRAL SPECIES	24	ENSGT00910000147297	ENSGT00390000001505.a.b #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150.f.b #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972.e #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00910000147634	ENSGT00940000154875.k #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836.h #29	ENSGT00940000154836.g.b #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32
Bolivian squirrel monkey	MODERN SPECIES	127	ENSSBOG00000033393	NICN1 (ENSSBOG00000034672) #7	ENSSBOG00000027333 #8	TCTA (ENSSBOG00000027277) #9	RHOA (ENSSBOG00000035785) #10	GPX1 (ENSSBOG00000027004) #11	USP4 (ENSSBOG00000030849) #13	C3orf62 (ENSSBOG00000018327) #14	IHO1 (ENSSBOG00000021171)	C3orf84 (ENSSBOG00000030757) #16	KLHDC8B (ENSSBOG00000028793) #17	CCDC71 (ENSSBOG00000017842) #18	LAMB2 (ENSSBOG00000022847) #19	USP19 (ENSSBOG00000026675) #20	ENSSBOG00000025786 #21	QRICH1 (ENSSBOG00000019070) #22	IMPDH2 (ENSSBOG00000033937)	ENSSBOG00000016233	NDUFAF3 (ENSSBOG00000020650) #23	DALRD3 (ENSSBOG00000019867) #24	WDR6 (ENSSBOG00000033806) #25	P4HTM (ENSSBOG00000031541) #26	ENSSBOG00000017416	ARIH2 (ENSSBOG00000026411) #27	ENSSBOG00000014684	SLC25A20 (ENSSBOG00000033387) #28	ENSSBOG00000028841 #29	ENSSBOG00000034262
Capuchin	MODERN SPECIES		ENSCCAG00000027946 #7	AMT (ENSCCAG00000030285) #8	ENSCCAG00000037011	TCTA (ENSCCAG00000020886) #9	ENSCCAG00000029968	ENSCCAG00000035444 #11	USP4 (ENSCCAG00000030853) #13	C3orf62 (ENSCCAG00000025866) #14	IHO1 (ENSCCAG00000030209)	C3orf84 (ENSCCAG00000036643) #16	KLHDC8B (ENSCCAG00000028139) #17	CCDC71 (ENSCCAG00000027094) #18	LAMB2 (ENSCCAG00000035337) #19	USP19 (ENSCCAG00000035273) #20	ENSCCAG00000037772 #21	QRICH1 (ENSCCAG00000037655) #22	IMPDH2 (ENSCCAG00000037618)	ENSCCAG00000025458	NDUFAF3 (ENSCCAG00000030039) #23	DALRD3 (ENSCCAG00000033230) #24	WDR6 (ENSCCAG00000023576) #25	P4HTM (ENSCCAG00000025551) #26	ENSCCAG00000027394 #27	ENSCCAG00000023903	SLC25A20 (ENSCCAG00000022247) #28	ENSCCAG00000019997	ENSCCAG00000033868 #29	IP6K2 (ENSCCAG00000030328) #30	NCKIPSD (ENSCCAG00000025161) #31	CELSR3 (ENSCCAG00000001849) #32	SLC26A6 (ENSCCAG00000018981) #33
Marmoset	MODERN SPECIES	6	DAG1 (ENSCJAG00000065054)	NICN1 (ENSCJAG00000003992) #7	AMT (ENSCJAG00000003962) #8	TCTA (ENSCJAG00000070394) #9	ENSCJAG00000013657 #10	Gpx-1 (ENSCJAG00000070831) #11	USP4 (ENSCJAG00000003788) #13	C3orf62 (ENSCJAG00000003785) #14	IHO1 (ENSCJAG00000003765)	C3orf84 (ENSCJAG00000038262) #16	KLHDC8B (ENSCJAG00000003745) #17	CCDC71 (ENSCJAG00000003741) #18	LAMB2 (ENSCJAG00000003674) #19	USP19 (ENSCJAG00000003571) #20	QARS1 (ENSCJAG00000003457) #21	QRICH1 (ENSCJAG00000003440) #22	IMPDH2 (ENSCJAG00000003400)	NDUFAF3 (ENSCJAG00000003387) #23	DALRD3 (ENSCJAG00000003370) #24	WDR6 (ENSCJAG00000003354) #25	P4HTM (ENSCJAG00000003342) #26	ARIH2 (ENSCJAG00000003305) #27	ENSCJAG00000018377	SLC25A20 (ENSCJAG00000003285) #28	PRKAR2A (ENSCJAG00000003255) #29	IP6K2 (ENSCJAG00000003247) #30	NCKIPSD (ENSCJAG00000003195) #31	CELSR3 (ENSCJAG00000003177) #32	SLC26A6 (ENSCJAG00000003142) #33	TMEM89 (ENSCJAG00000003139) #34	UQCRC1 (ENSCJAG00000003132) #35
Mas night monkey	MODERN SPECIES	1216	DAG1 (ENSANAG00000026927)	ENSANAG00000031541	ENSANAG00000030342 #7	AMT (ENSANAG00000027123) #8	TCTA (ENSANAG00000031226) #9	ENSANAG00000035201 #10	USP4 (ENSANAG00000027506) #13	C3orf62 (ENSANAG00000033847) #14	IHO1 (ENSANAG00000036680)	C3orf84 (ENSANAG00000023302) #16	KLHDC8B (ENSANAG00000026478) #17	CCDC71 (ENSANAG00000005027) #18	LAMB2 (ENSANAG00000020048) #19	USP19 (ENSANAG00000037255) #20	ENSANAG00000031868 #21	QRICH1 (ENSANAG00000037747) #22	ENSANAG00000019030	IMPDH2 (ENSANAG00000025168)	NDUFAF3 (ENSANAG00000022893) #23	DALRD3 (ENSANAG00000030773) #24	WDR6 (ENSANAG00000031798) #25	P4HTM (ENSANAG00000029556) #26	ARIH2 (ENSANAG00000037602) #27	ENSANAG00000026659	SLC25A20 (ENSANAG00000031990) #28	ENSANAG00000035935 #29	IP6K2 (ENSANAG00000027314) #30	NCKIPSD (ENSANAG00000021174) #31	CELSR3 (ENSANAG00000032574) #32	SLC26A6 (ENSANAG00000018864) #33	TMEM89 (ENSANAG00000010305) #34
Tarsier	MODERN SPECIES	6165									ENSTSYG00000035179 #15	CUNH3orf84 (ENSTSYG00000036075) #16	KLHDC8B (ENSTSYG00000027898) #17	CCDC71 (ENSTSYG00000030196) #18	LAMB2 (ENSTSYG00000008546) #19	USP19 (ENSTSYG00000008541) #20	QARS1 (ENSTSYG00000008462) #21	QRICH1 (ENSTSYG00000013448) #22	IMPDH2 (ENSTSYG00000013437)	ENSTSYG00000031492	NDUFAF3 (ENSTSYG00000013419) #23	DALRD3 (ENSTSYG00000029736) #24	WDR6 (ENSTSYG00000032831) #25	P4HTM (ENSTSYG00000012815) #26	ARIH2 (ENSTSYG00000004337) #27	SLC25A20 (ENSTSYG00000014696) #28	PRKAR2A (ENSTSYG00000014694) #29	IP6K2 (ENSTSYG00000002982) #30	NCKIPSD (ENSTSYG00000013422) #31	ENSTSYG00000032751	CELSR3 (ENSTSYG00000032417) #32	SLC26A6 (ENSTSYG00000027463) #33	TMEM89 (ENSTSYG00000032968) #34
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Glires	ANCESTRAL SPECIES	2	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Rodentia	ANCESTRAL SPECIES	2	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163668
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163668
Myomorpha	ANCESTRAL SPECIES	26	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163668
Muroidea	ANCESTRAL SPECIES	27	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163668
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163668
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163687
Cricetidae_B	ANCESTRAL SPECIES	23	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT01080000259070
Northern American deer mouse	MODERN SPECIES	20	Dag1 (ENSPEMG00000027318)	Nicn1 (ENSPEMG00000010264) #7	Amt (ENSPEMG00000001896) #8	Tcta (ENSPEMG00000025839) #9	Rhoa (ENSPEMG00000020093) #10	Gpx1 (ENSPEMG00000013554) #11	Usp4 (ENSPEMG00000010920) #13	1700102P08Rik (ENSPEMG00000014836) #14	Iho1 (ENSPEMG00000013425)	BC048562 (ENSPEMG00000008132) #16	Klhdc8b (ENSPEMG00000000378) #17	Ccdc71 (ENSPEMG00000029170) #18	Lamb2 (ENSPEMG00000002529) #19	Usp19 (ENSPEMG00000024178) #20	Qars (ENSPEMG00000017730) #21	Qrich1 (ENSPEMG00000001882) #22	Impdh2 (ENSPEMG00000005350)	Ndufaf3 (ENSPEMG00000017882) #23	Wdr6 (ENSPEMG00000023545) #25	P4htm (ENSPEMG00000023451) #26	Arih2 (ENSPEMG00000011412) #27	Slc25a20 (ENSPEMG00000010197) #28	Prkar2a (ENSPEMG00000011519) #29	ENSPEMG00000024370	Ip6k2 (ENSPEMG00000014148) #30	Nckipsd (ENSPEMG00000023944) #31	Celsr3 (ENSPEMG00000008073) #32	Slc26a6 (ENSPEMG00000001060) #33	Tmem89 (ENSPEMG00000012927) #34	Uqcrc1 (ENSPEMG00000009915) #35	ENSPEMG00000030097
Prairie vole	MODERN SPECIES	13	Nicn1 (ENSMOCG00000022631) #7	Amt (ENSMOCG00000009959) #8	Tcta (ENSMOCG00000012055) #9	Rhoa (ENSMOCG00000015603) #10	Gpx1 (ENSMOCG00000017016) #11	Usp4 (ENSMOCG00000022148) #13	1700102P08Rik (ENSMOCG00000010012) #14	Iho1 (ENSMOCG00000018017)	BC048562 (ENSMOCG00000019645) #16	Klhdc8b (ENSMOCG00000020213) #17	Ccdc71 (ENSMOCG00000003307) #18	Lamb2 (ENSMOCG00000020853) #19	ENSMOCG00000015175	Usp19 (ENSMOCG00000017005) #20	Qars (ENSMOCG00000019363) #21	Qrich1 (ENSMOCG00000005427) #22	Impdh2 (ENSMOCG00000012803)	ENSMOCG00000018646 #23	Dalrd3 (ENSMOCG00000000771) #24	Wdr6 (ENSMOCG00000014975) #25	P4htm (ENSMOCG00000022327) #26	Arih2 (ENSMOCG00000016530) #27	Slc25a20 (ENSMOCG00000022798) #28	Prkar2a (ENSMOCG00000012678) #29	IP6K2 (ENSMOCG00000007892) #30	NCKIPSD (ENSMOCG00000021027) #31	Celsr3 (ENSMOCG00000014537) #32	Slc26a6 (ENSMOCG00000016922) #33	TMEM89 (ENSMOCG00000012461) #34	Uqcrc1 (ENSMOCG00000015402) #35	ENSMOCG00000003616
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163687
Chinese hamster chok1gshd	MODERN SPECIES	284	Dag1 (ENSCGRG00001013896)	Nicn1 (ENSCGRG00001012420) #7	Amt (ENSCGRG00001000903) #8	Tcta (ENSCGRG00001010040) #9	Rhoa (ENSCGRG00001019741) #10	Gpx1 (ENSCGRG00001017592) #11	Usp4 (ENSCGRG00001011482) #13	1700102P08Rik (ENSCGRG00001024671) #14	Iho1 (ENSCGRG00001013280)	BC048562 (ENSCGRG00001021532) #16	Klhdc8b (ENSCGRG00001015630) #17	Ccdc71 (ENSCGRG00001005293) #18	Lamb2 (ENSCGRG00001021919) #19	Usp19 (ENSCGRG00001020926) #20	Qars (ENSCGRG00001021363) #21	Qrich1 (ENSCGRG00001017320) #22	Impdh2 (ENSCGRG00001002016)	Ndufaf3 (ENSCGRG00001023494) #23	Dalrd3 (ENSCGRG00001020135) #24	Wdr6 (ENSCGRG00001020890) #25	P4htm (ENSCGRG00001024387) #26	Arih2 (ENSCGRG00001020111) #27	Slc25a20 (ENSCGRG00001023443) #28	Prkar2a (ENSCGRG00001012291) #29	Ip6k2 (ENSCGRG00001002916) #30	Nckipsd (ENSCGRG00001022184) #31	Celsr3 (ENSCGRG00001010066) #32	Slc26a6 (ENSCGRG00001016449) #33	Tmem89 (ENSCGRG00001016654) #34	Uqcrc1 (ENSCGRG00001022206) #35	ENSCGRG00001019724
Golden Hamster	MODERN SPECIES	667	Mst1 (ENSMAUG00000020004)	ENSMAUG00000007244	Bsn (ENSMAUG00000021019)	Dag1 (ENSMAUG00000009208)	Nicn1 (ENSMAUG00000008091) #7	Amt (ENSMAUG00000009244) #8	Usp4 (ENSMAUG00000022197) #13	1700102P08Rik (ENSMAUG00000007415) #14	Iho1 (ENSMAUG00000014009)	BC048562 (ENSMAUG00000018756) #16	Klhdc8b (ENSMAUG00000022051) #17	Ccdc71 (ENSMAUG00000003305) #18	Lamb2 (ENSMAUG00000022154) #19	Usp19 (ENSMAUG00000015842) #20	Qars (ENSMAUG00000022218) #21	Qrich1 (ENSMAUG00000001411) #22	Impdh2 (ENSMAUG00000006873)	Ndufaf3 (ENSMAUG00000014556) #23	Dalrd3 (ENSMAUG00000008143) #24	Wdr6 (ENSMAUG00000020736) #25	P4htm (ENSMAUG00000011007) #26	Arih2 (ENSMAUG00000009916) #27	Slc25a20 (ENSMAUG00000014722) #28	Prkar2a (ENSMAUG00000008358) #29	Ip6k2 (ENSMAUG00000008558) #30	Nckipsd (ENSMAUG00000012099) #31	Celsr3 (ENSMAUG00000018857) #32	Slc26a6 (ENSMAUG00000014243) #33	Uqcrc1 (ENSMAUG00000010209) #35	ENSMAUG00000001258	Pfkfb4 (ENSMAUG00000015017) #37
Murinae	ANCESTRAL SPECIES	3	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163668
Mus	ANCESTRAL SPECIES	4	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163668
Mus_A	ANCESTRAL SPECIES	4	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163668
Mus_B	ANCESTRAL SPECIES	3	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b.s #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163668
Mus_C	ANCESTRAL SPECIES	23	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b.s #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875.m #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163668
Steppe mouse	MODERN SPECIES	2942	Nicn1 (ENSMSIG00000024241) #7	Amt (ENSMSIG00000024252) #8	Tcta (ENSMSIG00000024280) #9	Rhoa (ENSMSIG00000024290) #10	Gpx1 (ENSMSIG00000024310) #11	Usp4 (ENSMSIG00000024333) #13	ENSMSIG00000024427	1700102P08Rik (ENSMSIG00000024429) #14	Iho1 (ENSMSIG00000024437)	BC048562 (ENSMSIG00000024449) #16	Klhdc8b (ENSMSIG00000024460) #17	Ccdc71 (ENSMSIG00000024477) #18	Lamb2 (ENSMSIG00000024492) #19	Usp19 (ENSMSIG00000024529) #20	Qars (ENSMSIG00000024675) #21	Qrich1 (ENSMSIG00000024752) #22	Impdh2 (ENSMSIG00000000088)	Ndufaf3 (ENSMSIG00000000202) #23	Dalrd3 (ENSMSIG00000000255) #24	Wdr6 (ENSMSIG00000000332) #25	P4htm (ENSMSIG00000000386) #26	ENSMSIG00000000455 #27	Slc25a20 (ENSMSIG00000000560) #28	Prkar2a (ENSMSIG00000000599) #29	ENSMSIG00000000689	Ip6k2 (ENSMSIG00000000718) #30	Nckipsd (ENSMSIG00000000798) #31	Celsr3 (ENSMSIG00000000863) #32	Slc26a6 (ENSMSIG00000001152) #33	Tmem89 (ENSMSIG00000001240) #34	Uqcrc1 (ENSMSIG00000001256) #35
spretus	MODERN SPECIES	18	Dag1 (MGP_SPRETEiJ_G0033824)	Nicn1 (MGP_SPRETEiJ_G0033825) #7	Amt (MGP_SPRETEiJ_G0033826) #8	MGP_SPRETEiJ_G0033827 #11	Tcta (MGP_SPRETEiJ_G0033828) #9	MGP_SPRETEiJ_G0033829	Usp4 (MGP_SPRETEiJ_G0033830) #13	1700102P08Rik (MGP_SPRETEiJ_G0033831) #14	Iho1 (MGP_SPRETEiJ_G0033832)	BC048562 (MGP_SPRETEiJ_G0033833) #16	Klhdc8b (MGP_SPRETEiJ_G0033834) #17	Ccdc71 (MGP_SPRETEiJ_G0033835) #18	Lamb2 (MGP_SPRETEiJ_G0033836) #19	Usp19 (MGP_SPRETEiJ_G0033837) #20	Qars (MGP_SPRETEiJ_G0033838) #21	Qrich1 (MGP_SPRETEiJ_G0033839) #22	Impdh2 (MGP_SPRETEiJ_G0033840)	Ndufaf3 (MGP_SPRETEiJ_G0033841) #23	Dalrd3 (MGP_SPRETEiJ_G0033842) #24	Wdr6 (MGP_SPRETEiJ_G0033843) #25	P4htm (MGP_SPRETEiJ_G0033844) #26	Arih2 (MGP_SPRETEiJ_G0033845) #27	Slc25a20 (MGP_SPRETEiJ_G0033846) #28	Prkar2a (MGP_SPRETEiJ_G0033847) #29	Ip6k2 (MGP_SPRETEiJ_G0033848) #30	Nckipsd (MGP_SPRETEiJ_G0033849) #31	Celsr3 (MGP_SPRETEiJ_G0033850) #32	Slc26a6 (MGP_SPRETEiJ_G0033851) #33	Tmem89 (MGP_SPRETEiJ_G0033852) #34	Uqcrc1 (MGP_SPRETEiJ_G0033853) #35	Col7a1 (MGP_SPRETEiJ_G0033854)
Mouse	MODERN SPECIES	18	Dag1 (ENSMUSG00000039952)	Nicn1 (ENSMUSG00000032606) #7	Amt (ENSMUSG00000032607) #8	Tcta (ENSMUSG00000039461) #9	Rhoa (ENSMUSG00000007815) #10	Gpx1 (ENSMUSG00000063856) #11	Usp4 (ENSMUSG00000032612) #13	1700102P08Rik (ENSMUSG00000032611) #14	Iho1 (ENSMUSG00000047220)	BC048562 (ENSMUSG00000050641) #16	Klhdc8b (ENSMUSG00000032609) #17	Ccdc71 (ENSMUSG00000049305) #18	Lamb2 (ENSMUSG00000052911) #19	Usp19 (ENSMUSG00000006676) #20	Qars (ENSMUSG00000032604) #21	Qrich1 (ENSMUSG00000006673) #22	Impdh2 (ENSMUSG00000062867)	Ndufaf3 (ENSMUSG00000070283) #23	Dalrd3 (ENSMUSG00000019039) #24	Wdr6 (ENSMUSG00000066357) #25	P4htm (ENSMUSG00000006675) #26	Arih2 (ENSMUSG00000064145) #27	Slc25a20 (ENSMUSG00000032602) #28	Prkar2a (ENSMUSG00000032601) #29	Ip6k2 (ENSMUSG00000032599) #30	Nckipsd (ENSMUSG00000032598) #31	Celsr3 (ENSMUSG00000023473) #32	Slc26a6 (ENSMUSG00000023259) #33	Tmem89 (ENSMUSG00000025652) #34	Uqcrc1 (ENSMUSG00000025651) #35	Col7a1 (ENSMUSG00000025650)
Ryukyu mouse	MODERN SPECIES	18	Dag1 (MGP_CAROLIEiJ_G0032679)	Nicn1 (MGP_CAROLIEiJ_G0032680) #7	Amt (MGP_CAROLIEiJ_G0032681) #8	Tcta (MGP_CAROLIEiJ_G0032682) #9	MGP_CAROLIEiJ_G0032683	MGP_CAROLIEiJ_G0032684 #11	Usp4 (MGP_CAROLIEiJ_G0032685) #13	1700102P08Rik (MGP_CAROLIEiJ_G0032686) #14	Iho1 (MGP_CAROLIEiJ_G0032687)	BC048562 (MGP_CAROLIEiJ_G0032688) #16	Klhdc8b (MGP_CAROLIEiJ_G0032689) #17	Ccdc71 (MGP_CAROLIEiJ_G0032690) #18	Lamb2 (MGP_CAROLIEiJ_G0032691) #19	MGP_CAROLIEiJ_G0032692	Qars (MGP_CAROLIEiJ_G0032693) #21	Qrich1 (MGP_CAROLIEiJ_G0032694) #22	Impdh2 (MGP_CAROLIEiJ_G0032695)	MGP_CAROLIEiJ_G0032696	Dalrd3 (MGP_CAROLIEiJ_G0032697) #24	Wdr6 (MGP_CAROLIEiJ_G0032698) #25	P4htm (MGP_CAROLIEiJ_G0032699) #26	Arih2 (MGP_CAROLIEiJ_G0032700) #27	Slc25a20 (MGP_CAROLIEiJ_G0032701) #28	Prkar2a (MGP_CAROLIEiJ_G0032702) #29	Ip6k2 (MGP_CAROLIEiJ_G0032703) #30	Nckipsd (MGP_CAROLIEiJ_G0032704) #31	Celsr3 (MGP_CAROLIEiJ_G0032705) #32	Slc26a6 (MGP_CAROLIEiJ_G0032706) #33	Tmem89 (MGP_CAROLIEiJ_G0032707) #34	Uqcrc1 (MGP_CAROLIEiJ_G0032708) #35	Col7a1 (MGP_CAROLIEiJ_G0032709)
Shrew mouse	MODERN SPECIES	1	Dag1 (MGP_PahariEiJ_G0015547)	Nicn1 (MGP_PahariEiJ_G0015548) #7	Amt (MGP_PahariEiJ_G0015549) #8	MGP_PahariEiJ_G0015550 #9	Rhoa (MGP_PahariEiJ_G0015551) #10	MGP_PahariEiJ_G0015552 #11	Usp4 (MGP_PahariEiJ_G0015553) #13	1700102P08Rik (MGP_PahariEiJ_G0015554) #14	Iho1 (MGP_PahariEiJ_G0015555)	BC048562 (MGP_PahariEiJ_G0015556) #16	Klhdc8b (MGP_PahariEiJ_G0015557) #17	Ccdc71 (MGP_PahariEiJ_G0015558) #18	MGP_PahariEiJ_G0015559 #19	Usp19 (MGP_PahariEiJ_G0015560) #20	Qars (MGP_PahariEiJ_G0015561) #21	Qrich1 (MGP_PahariEiJ_G0015562) #22	Impdh2 (MGP_PahariEiJ_G0015563)	Ndufaf3 (MGP_PahariEiJ_G0015564) #23	Dalrd3 (MGP_PahariEiJ_G0015565) #24	Wdr6 (MGP_PahariEiJ_G0015566) #25	P4htm (MGP_PahariEiJ_G0015567) #26	Arih2 (MGP_PahariEiJ_G0015568) #27	Slc25a20 (MGP_PahariEiJ_G0015569) #28	Prkar2a (MGP_PahariEiJ_G0015570) #29	Ip6k2 (MGP_PahariEiJ_G0015571) #30	Nckipsd (MGP_PahariEiJ_G0015572) #31	Celsr3 (MGP_PahariEiJ_G0015573) #32	Slc26a6 (MGP_PahariEiJ_G0015574) #33	Tmem89 (MGP_PahariEiJ_G0015575) #34	Uqcrc1 (MGP_PahariEiJ_G0015576) #35	Col7a1 (MGP_PahariEiJ_G0015577)
Rat	MODERN SPECIES	18	Bsn (ENSRNOG00000030714)	Dag1 (ENSRNOG00000019400)	Nicn1 (ENSRNOG00000049083) #7	Amt (ENSRNOG00000050214) #8	Rhoa (ENSRNOG00000050519) #10	Gpx1 (ENSRNOG00000048812) #11	LOC498675 (ENSRNOG00000046155) #14	Usp4 (ENSRNOG00000054863) #13	Iho1 (ENSRNOG00000048919)	LOC680045 (ENSRNOG00000047468) #16	Klhdc8b (ENSRNOG00000047867) #17	Ccdc71 (ENSRNOG00000048718) #18	Lamb2 (ENSRNOG00000047768) #19	Usp19 (ENSRNOG00000049531) #20	Qars1 (ENSRNOG00000060912) #21	Qrich1 (ENSRNOG00000025071) #22	Impdh2 (ENSRNOG00000031965)	Ndufaf3 (ENSRNOG00000020068) #23	Dalrd3 (ENSRNOG00000020159) #24	Wdr6 (ENSRNOG00000020185) #25	P4htm (ENSRNOG00000020249) #26	Arih2 (ENSRNOG00000031827) #27	Slc25a20 (ENSRNOG00000020288) #28	Prkar2a (ENSRNOG00000020284) #29	Ip6k2 (ENSRNOG00000020361) #30	Nckipsd (ENSRNOG00000031816) #31	Celsr3 (ENSRNOG00000053889) #32	Slc26a6 (ENSRNOG00000020450) #33	Tmem89 (ENSRNOG00000031141) #34	Uqcrc1 (ENSRNOG00000032134) #35	Col7a1 (ENSRNOG00000020579)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1657	Dag1 (ENSNGAG00000002651)	Nicn1 (ENSNGAG00000003280) #7	Amt (ENSNGAG00000004673) #8	Tcta (ENSNGAG00000005564) #9	Rhoa (ENSNGAG00000007854) #10	Gpx1 (ENSNGAG00000015216) #11	Usp4 (ENSNGAG00000016905) #13	1700102P08Rik (ENSNGAG00000006755) #14	Iho1 (ENSNGAG00000008202)	BC048562 (ENSNGAG00000009611) #16	Klhdc8b (ENSNGAG00000010343) #17	Ccdc71 (ENSNGAG00000010873) #18	Lamb2 (ENSNGAG00000013899) #19	Usp19 (ENSNGAG00000017354) #20	Qars (ENSNGAG00000019897) #21	Qrich1 (ENSNGAG00000000436) #22	Impdh2 (ENSNGAG00000001022)	Ndufaf3 (ENSNGAG00000001095) #23	Dalrd3 (ENSNGAG00000002570) #24	Wdr6 (ENSNGAG00000000962) #25	P4htm (ENSNGAG00000006218) #26	Arih2 (ENSNGAG00000013630) #27	Slc25a20 (ENSNGAG00000014160) #28	Prkar2a (ENSNGAG00000015534) #29	Ip6k2 (ENSNGAG00000017095) #30	ENSNGAG00000018381 #31	Celsr3 (ENSNGAG00000021190) #32	ENSNGAG00000017439 #33	ENSNGAG00000015652 #33	Tmem89 (ENSNGAG00000017089) #34	Uqcrc1 (ENSNGAG00000018184) #35
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	110	Nicn1 (ENSJJAG00000015944) #7	ENSJJAG00000005274 #8	Tcta (ENSJJAG00000015029) #9	ENSJJAG00000016295	Gpx1 (ENSJJAG00000005600) #11	Usp4 (ENSJJAG00000022821) #13	1700102P08Rik (ENSJJAG00000023977) #14	ENSJJAG00000016241	BC048562 (ENSJJAG00000013435) #16	Klhdc8b (ENSJJAG00000012953) #17	Ccdc71 (ENSJJAG00000017724) #18	Lamb2 (ENSJJAG00000012896) #19	ENSJJAG00000003459	Usp19 (ENSJJAG00000018701) #20	Qars (ENSJJAG00000010985) #21	ENSJJAG00000003833 #22	ENSJJAG00000021596 #22	Impdh2 (ENSJJAG00000023299)	Ndufaf3 (ENSJJAG00000013949) #23	Dalrd3 (ENSJJAG00000020047) #24	Wdr6 (ENSJJAG00000018299) #25	P4htm (ENSJJAG00000013960) #26	Arih2 (ENSJJAG00000023246) #27	ENSJJAG00000012465 #29	Ip6k2 (ENSJJAG00000021908) #30	ENSJJAG00000007230 #31	Celsr3 (ENSJJAG00000021460) #32	Slc26a6 (ENSJJAG00000020602) #33	Pfkfb4 (ENSJJAG00000000170) #37
Lesser Egyptian jerboa	MODERN SPECIES	110	ENSJJAG00000005274 #8	Tcta (ENSJJAG00000015029) #9	ENSJJAG00000016295	Gpx1 (ENSJJAG00000005600) #11	Usp4 (ENSJJAG00000022821) #13	1700102P08Rik (ENSJJAG00000023977) #14	ENSJJAG00000016241	BC048562 (ENSJJAG00000013435) #16	Klhdc8b (ENSJJAG00000012953) #17	Ccdc71 (ENSJJAG00000017724) #18	Lamb2 (ENSJJAG00000012896) #19	ENSJJAG00000003459	Usp19 (ENSJJAG00000018701) #20	Qars (ENSJJAG00000010985) #21	ENSJJAG00000003833 #22	ENSJJAG00000021596 #22	Impdh2 (ENSJJAG00000023299)	Ndufaf3 (ENSJJAG00000013949) #23	Dalrd3 (ENSJJAG00000020047) #24	Wdr6 (ENSJJAG00000018299) #25	P4htm (ENSJJAG00000013960) #26	Arih2 (ENSJJAG00000023246) #27	ENSJJAG00000012465 #29	Ip6k2 (ENSJJAG00000021908) #30	ENSJJAG00000007230 #31	Celsr3 (ENSJJAG00000021460) #32	Slc26a6 (ENSJJAG00000020602) #33	Pfkfb4 (ENSJJAG00000000170) #37
Lesser Egyptian jerboa	MODERN SPECIES	194	ENSJJAG00000022883	Ypel1 (ENSJJAG00000022948)	Ppil2 (ENSJJAG00000023279)	2610318N02Rik (ENSJJAG00000023302)	Sdf2l1 (ENSJJAG00000023389)	Ydjc (ENSJJAG00000023622)	Ube2l3 (ENSJJAG00000009048)	Rimbp3 (ENSJJAG00000009598)	Hic2 (ENSJJAG00000009939)	Tmem191 (ENSJJAG00000010181)	Pi4ka (ENSJJAG00000011936)	Serpind1 (ENSJJAG00000012633)	Snap29 (ENSJJAG00000013257)	Crkl (ENSJJAG00000013573)	Aifm3 (ENSJJAG00000014987)	ENSJJAG00000016254 #22	Lztr1 (ENSJJAG00000016284)	ENSJJAG00000018807	Mzt2 (ENSJJAG00000018911)	ENSJJAG00000020030	Smpd4 (ENSJJAG00000020428)	Ccdc74a (ENSJJAG00000020486)	Med15 (ENSJJAG00000021640)	ENSJJAG00000022497	Klhl22 (ENSJJAG00000022580)	Scarf2 (ENSJJAG00000023062)	Car15 (ENSJJAG00000013542)	Dgcr2 (ENSJJAG00000022914)	Tssk1 (ENSJJAG00000013118)	Tssk2 (ENSJJAG00000012974)	Ess2 (ENSJJAG00000002400)
Kangaroo rat	MODERN SPECIES	426	Dag1 (ENSDORG00000026820)	Nicn1 (ENSDORG00000003385) #7	Amt (ENSDORG00000003384) #8	Tcta (ENSDORG00000003383) #9	ENSDORG00000025671 #10	Gpx1 (ENSDORG00000003381) #11	Usp4 (ENSDORG00000007948) #13	1700102P08Rik (ENSDORG00000007947) #14	BC048562 (ENSDORG00000024843) #16	Klhdc8b (ENSDORG00000027491) #17	Ccdc71 (ENSDORG00000007398) #18	Lamb2 (ENSDORG00000007397) #19	Usp19 (ENSDORG00000007395) #20	ENSDORG00000007392 #21	ENSDORG00000029720 #21	Qrich1 (ENSDORG00000004362) #22	Impdh2 (ENSDORG00000004361)	Ndufaf3 (ENSDORG00000004360) #23	Dalrd3 (ENSDORG00000000367) #24	Wdr6 (ENSDORG00000028656) #25	P4htm (ENSDORG00000000362) #26	ENSDORG00000026187 #27	Slc25a20 (ENSDORG00000010459) #28	Prkar2a (ENSDORG00000004663) #29	Ip6k2 (ENSDORG00000008962) #30	Nckipsd (ENSDORG00000008960) #31	ENSDORG00000026062 #31	Celsr3 (ENSDORG00000008952) #32	Tmem89 (ENSDORG00000008951) #34	Uqcrc1 (ENSDORG00000008949) #35	ENSDORG00000008942
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000160568.n #36
Sciuridae	ANCESTRAL SPECIES	26	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000160568.n #36
Marmotini	ANCESTRAL SPECIES	25	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000160568.n #36
Alpin marmot	MODERN SPECIES	19	DAG1 (ENSMMMG00000004993)	NICN1 (ENSMMMG00000005004) #7	AMT (ENSMMMG00000005018) #8	ENSMMMG00000005039 #9	RHOA (ENSMMMG00000005067) #10	GPX1 (ENSMMMG00000005079) #11	USP4 (ENSMMMG00000005114) #13	C3orf62 (ENSMMMG00000005162) #14	IHO1 (ENSMMMG00000005177)	C3orf84 (ENSMMMG00000005193) #16	KLHDC8B (ENSMMMG00000005206) #17	CCDC71 (ENSMMMG00000005226) #18	LAMB2 (ENSMMMG00000005235) #19	USP19 (ENSMMMG00000005310) #20	QARS1 (ENSMMMG00000005497) #21	QRICH1 (ENSMMMG00000005623) #22	IMPDH2 (ENSMMMG00000005658)	NDUFAF3 (ENSMMMG00000005669) #23	DALRD3 (ENSMMMG00000005693) #24	WDR6 (ENSMMMG00000005711) #25	P4HTM (ENSMMMG00000005724) #26	ARIH2 (ENSMMMG00000005739) #27	SLC25A20 (ENSMMMG00000005774) #28	PRKAR2A (ENSMMMG00000005788) #29	IP6K2 (ENSMMMG00000005847) #30	NCKIPSD (ENSMMMG00000005877) #31	CELSR3 (ENSMMMG00000005898) #32	SLC26A6 (ENSMMMG00000006052) #33	TMEM89 (ENSMMMG00000006076) #34	ENSMMMG00000006098	UQCRC1 (ENSMMMG00000006102) #35
Marmotini_b	ANCESTRAL SPECIES	32	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000160568.n #36
Arctic ground squirrel	MODERN SPECIES	26	BSN (ENSUPAG00010022714)	DAG1 (ENSUPAG00010022721)	NICN1 (ENSUPAG00010022727) #7	AMT (ENSUPAG00010022728) #8	TCTA (ENSUPAG00010022731) #9	RHOA (ENSUPAG00010022734) #10	GPX1 (ENSUPAG00010022736) #11	USP4 (ENSUPAG00010022743) #13	IHO1 (ENSUPAG00010022748)	C3orf84 (ENSUPAG00010022750) #16	KLHDC8B (ENSUPAG00010022751) #17	CCDC71 (ENSUPAG00010022756) #18	LAMB2 (ENSUPAG00010022760) #19	USP19 (ENSUPAG00010022767) #20	QARS1 (ENSUPAG00010022784) #21	QRICH1 (ENSUPAG00010022787) #22	IMPDH2 (ENSUPAG00010022794)	NDUFAF3 (ENSUPAG00010022795) #23	DALRD3 (ENSUPAG00010022797) #24	WDR6 (ENSUPAG00010022801) #25	P4HTM (ENSUPAG00010022803) #26	ARIH2 (ENSUPAG00010022807) #27	SLC25A20 (ENSUPAG00010022813) #28	PRKAR2A (ENSUPAG00010022817) #29	ENSUPAG00010022820	IP6K2 (ENSUPAG00010022821) #30	NCKIPSD (ENSUPAG00010022823) #31	CELSR3 (ENSUPAG00010000011) #32	SLC26A6 (ENSUPAG00010000265) #33	TMEM89 (ENSUPAG00010000342) #34	UQCRC1 (ENSUPAG00010000354) #35
Squirrel	MODERN SPECIES	129	NICN1 (ENSSTOG00000012434) #7	ENSSTOG00000012428 #8	TCTA (ENSSTOG00000011135) #9	RHOA (ENSSTOG00000004561) #10	GPX1 (ENSSTOG00000025544) #11	USP4 (ENSSTOG00000011315) #13	C3orf62 (ENSSTOG00000011308) #14	IHO1 (ENSSTOG00000011292)	C3orf84 (ENSSTOG00000025817) #16	KLHDC8B (ENSSTOG00000025019) #17	CCDC71 (ENSSTOG00000025759) #18	ENSSTOG00000031228	LAMB2 (ENSSTOG00000001866) #19	USP19 (ENSSTOG00000001848) #20	QARS1 (ENSSTOG00000001822) #21	QRICH1 (ENSSTOG00000001813) #22	NDUFAF3 (ENSSTOG00000001799) #23	IMPDH2 (ENSSTOG00000001805)	DALRD3 (ENSSTOG00000001789) #24	WDR6 (ENSSTOG00000001782) #25	P4HTM (ENSSTOG00000001776) #26	ARIH2 (ENSSTOG00000001766) #27	SLC25A20 (ENSSTOG00000003327) #28	PRKAR2A (ENSSTOG00000003312) #29	IP6K2 (ENSSTOG00000003496) #30	NCKIPSD (ENSSTOG00000023487) #31	CELSR3 (ENSSTOG00000028364) #32	SLC26A6 (ENSSTOG00000027369) #33	TMEM89 (ENSSTOG00000034214) #34	UQCRC1 (ENSSTOG00000010311) #35	ENSSTOG00000010204
Eurasian red squirrel	MODERN SPECIES	1	NICN1 (ENSSVLG00005020072) #7	AMT (ENSSVLG00005019729) #8	TCTA (ENSSVLG00005019277) #9	RHOA (ENSSVLG00005019199) #10	GPX1 (ENSSVLG00005019095) #11	ENSSVLG00005019055	USP4 (ENSSVLG00005018952) #13	C3orf62 (ENSSVLG00005018903) #14	IHO1 (ENSSVLG00005018854)	C3orf84 (ENSSVLG00005018760) #16	KLHDC8B (ENSSVLG00005018723) #17	CCDC71 (ENSSVLG00005018689) #18	USP19 (ENSSVLG00005018580) #20	QARS1 (ENSSVLG00005017939) #21	ENSSVLG00005017903	QRICH1 (ENSSVLG00005017854) #22	IMPDH2 (ENSSVLG00005017627)	NDUFAF3 (ENSSVLG00005017494) #23	DALRD3 (ENSSVLG00005017322) #24	WDR6 (ENSSVLG00005017130) #25	P4HTM (ENSSVLG00005017043) #26	ARIH2 (ENSSVLG00005016955) #27	SLC25A20 (ENSSVLG00005016865) #28	ENSSVLG00005016815	PRKAR2A (ENSSVLG00005016753) #29	IP6K2 (ENSSVLG00005016715) #30	NCKIPSD (ENSSVLG00005016641) #31	CELSR3 (ENSSVLG00005016334) #32	ENSSVLG00005016256 #33	TMEM89 (ENSSVLG00005016207) #34	UQCRC1 (ENSSVLG00005016091) #35
Hystricomorpha	ANCESTRAL SPECIES	6	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836.i.b #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000160568.n #36
Hystricomorpha_a	ANCESTRAL SPECIES	4	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000164003	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836.i.b #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000153769.E
Guinea pig	DUPLICATION
Guinea pig	MODERN SPECIES	8	BSN (ENSCPOG00000040726)	DAG1 (ENSCPOG00000034832)	NICN1 (ENSCPOG00000019324) #7	AMT (ENSCPOG00000023233) #8	TCTA (ENSCPOG00000035311) #9	RHOA (ENSCPOG00000014073) #10	USP4 (ENSCPOG00000010272) #13	C3orf62 (ENSCPOG00000026439) #14	IHO1 (ENSCPOG00000013672)	C3orf84 (ENSCPOG00000024951) #16	KLHDC8B (ENSCPOG00000031477) #17	CCDC71 (ENSCPOG00000010009) #18	LAMB2 (ENSCPOG00000009993) #19	USP19 (ENSCPOG00000009975) #20	QARS1 (ENSCPOG00000009967) #21	ENSCPOG00000009958 #22	IMPDH2 (ENSCPOG00000009955)	NDUFAF3 (ENSCPOG00000009951) #23	DALRD3 (ENSCPOG00000022699) #24	WDR6 (ENSCPOG00000000708) #25	P4HTM (ENSCPOG00000008347) #26	ARIH2 (ENSCPOG00000008337) #27	ENSCPOG00000012248	SLC25A20 (ENSCPOG00000009309) #28	PRKAR2A (ENSCPOG00000001218) #29	IP6K2 (ENSCPOG00000007856) #30	NCKIPSD (ENSCPOG00000020345) #31	CELSR3 (ENSCPOG00000034949) #32	SLC26A6 (ENSCPOG00000033409) #33	TMEM89 (ENSCPOG00000007833) #34	UQCRC1 (ENSCPOG00000004273) #35
Guinea pig	MODERN SPECIES	6	ENSCPOG00000031274	ENSCPOG00000039823	FTMT (ENSCPOG00000021524)	SRFBP1 (ENSCPOG00000004695)	ENSCPOG00000023049	ENSCPOG00000015378	SNCAIP (ENSCPOG00000003517)	SNX2 (ENSCPOG00000010095)	SNX24 (ENSCPOG00000031081)	PPIC (ENSCPOG00000038580)	PRDM6 (ENSCPOG00000004258)	CEP120 (ENSCPOG00000023434)	ENSCPOG00000026604	CSNK1G3 (ENSCPOG00000007642)	ZNF608 (ENSCPOG00000007196)	ENSCPOG00000039938 #22	GRAMD2B (ENSCPOG00000033571)	ALDH7A1 (ENSCPOG00000013120)	PHAX (ENSCPOG00000026981)	TEX43 (ENSCPOG00000013123)	LMNB1 (ENSCPOG00000013383)	MARCHF3 (ENSCPOG00000032636)	ENSCPOG00000022550	C5orf63 (ENSCPOG00000039359)	MEGF10 (ENSCPOG00000003151)	PRRC1 (ENSCPOG00000010724)	CTXN3 (ENSCPOG00000031953)	CCDC192 (ENSCPOG00000034590)	SLC12A2 (ENSCPOG00000014529)	FBN2 (ENSCPOG00000000726)	SLC27A6 (ENSCPOG00000000262)
Hystricomorpha_b	ANCESTRAL SPECIES	63	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000164003	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836.i.b #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00940000158931 #35	ENSGT00940000153769.E	ENSGT00950000182835.c.d #37
Degu	MODERN SPECIES	49	DAG1 (ENSODEG00000018370)	ENSODEG00000018172 #7	ENSODEG00000018166 #8	TCTA (ENSODEG00000018418) #9	ENSODEG00000018416	GPX1 (ENSODEG00000018240) #11	USP4 (ENSODEG00000018126) #13	C3orf62 (ENSODEG00000018275) #14	IHO1 (ENSODEG00000018168)	C3orf84 (ENSODEG00000018152) #16	KLHDC8B (ENSODEG00000018149) #17	CCDC71 (ENSODEG00000018170) #18	LAMB2 (ENSODEG00000018161) #19	USP19 (ENSODEG00000018209) #20	ENSODEG00000018381 #21	QRICH1 (ENSODEG00000018211) #22	ENSODEG00000018332	NDUFAF3 (ENSODEG00000018257) #23	DALRD3 (ENSODEG00000018251) #24	WDR6 (ENSODEG00000018229) #25	P4HTM (ENSODEG00000018157) #26	ARIH2 (ENSODEG00000018288) #27	SLC25A20 (ENSODEG00000018156) #28	ENSODEG00000018180 #29	IP6K2 (ENSODEG00000018212) #30	NCKIPSD (ENSODEG00000018165) #31	CELSR3 (ENSODEG00000018319) #32	SLC26A6 (ENSODEG00000018141) #33	UQCRC1 (ENSODEG00000018299) #35	ENSODEG00000018336	PFKFB4 (ENSODEG00000018219) #37
Long-tailed chinchilla	MODERN SPECIES	239	MST1 (ENSCLAG00000010949)	APEH (ENSCLAG00000006987)	BSN (ENSCLAG00000006929)	DAG1 (ENSCLAG00000009430)	NICN1 (ENSCLAG00000007906) #7	AMT (ENSCLAG00000007577) #8	TCTA (ENSCLAG00000009163) #9	RHOA (ENSCLAG00000007531) #10	USP4 (ENSCLAG00000006925) #13	C3orf84 (ENSCLAG00000006773) #16	KLHDC8B (ENSCLAG00000007333) #17	CCDC71 (ENSCLAG00000006770) #18	LAMB2 (ENSCLAG00000012420) #19	USP19 (ENSCLAG00000009469) #20	QARS1 (ENSCLAG00000009982) #21	QRICH1 (ENSCLAG00000011484) #22	NDUFAF3 (ENSCLAG00000010367) #23	IMPDH2 (ENSCLAG00000010876)	DALRD3 (ENSCLAG00000010911) #24	WDR6 (ENSCLAG00000013367) #25	P4HTM (ENSCLAG00000012640) #26	ARIH2 (ENSCLAG00000007056) #27	SLC25A20 (ENSCLAG00000006666) #28	PRKAR2A (ENSCLAG00000013198) #29	IP6K2 (ENSCLAG00000016270) #30	NCKIPSD (ENSCLAG00000010729) #31	CELSR3 (ENSCLAG00000015824) #32	SLC26A6 (ENSCLAG00000011172) #33	ENSCLAG00000009195	UQCRC1 (ENSCLAG00000011523) #35	ENSCLAG00000012526
Naked mole-rat female	MODERN SPECIES	27	ENSHGLG00000049998	ENSHGLG00000043499	NICN1 (ENSHGLG00000014501) #7	AMT (ENSHGLG00000019416) #8	TCTA (ENSHGLG00000014711) #9	RHOA (ENSHGLG00000037920) #10	GPX1 (ENSHGLG00000014333) #11	USP4 (ENSHGLG00000014262) #13	C3orf62 (ENSHGLG00000032235) #14	CCDC36 (ENSHGLG00000045203)	C3orf84 (ENSHGLG00000047605) #16	KLHDC8B (ENSHGLG00000012255) #17	LAMB2 (ENSHGLG00000014718) #19	USP19 (ENSHGLG00000014432) #20	QARS1 (ENSHGLG00000014071) #21	QRICH1 (ENSHGLG00000013818) #22	IMPDH2 (ENSHGLG00000013375)	ENSHGLG00000012830 #23	ENSHGLG00000037627 #24	ENSHGLG00000044769 #25	P4HTM (ENSHGLG00000012350) #26	ENSHGLG00000012140 #27	Ctnnb1 (ENSHGLG00000014308)	ENSHGLG00000013251	ENSHGLG00000044049	TRAK1 (ENSHGLG00000012903)	CCK (ENSHGLG00000044393)	ENSHGLG00000012412	VIPR1 (ENSHGLG00000012277)	ENSHGLG00000038151	ENSHGLG00000038285
Lagomorpha	ANCESTRAL SPECIES	11	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875.r #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Rabbit	MODERN SPECIES	20	ENSOCUG00000030238	DAG1 (ENSOCUG00000003439)	AMT (ENSOCUG00000013310) #8	TCTA (ENSOCUG00000013319) #9	RHOA (ENSOCUG00000013323) #10	ENSOCUG00000005938 #11	USP4 (ENSOCUG00000005926) #13	C3orf62 (ENSOCUG00000032815) #14	IHO1 (ENSOCUG00000005910)	C3orf84 (ENSOCUG00000022446) #16	KLHDC8B (ENSOCUG00000017588) #17	CCDC71 (ENSOCUG00000017593) #18	LAMB2 (ENSOCUG00000005101) #19	USP19 (ENSOCUG00000005092) #20	QARS1 (ENSOCUG00000005082) #21	QRICH1 (ENSOCUG00000017728) #22	IMPDH2 (ENSOCUG00000017724)	NDUFAF3 (ENSOCUG00000017721) #23	DALRD3 (ENSOCUG00000017715) #24	WDR6 (ENSOCUG00000017712) #25	ENSOCUG00000021347	P4HTM (ENSOCUG00000017707) #26	ARIH2 (ENSOCUG00000017699) #27	ENSOCUG00000029040	SLC25A20 (ENSOCUG00000016420) #28	PRKAR2A (ENSOCUG00000012426) #29	IP6K2 (ENSOCUG00000012420) #30	CELSR3 (ENSOCUG00000025952) #32	SLC26A6 (ENSOCUG00000000624) #33	TMEM89 (ENSOCUG00000003926) #34	UQCRC1 (ENSOCUG00000002041) #35
Pika	MODERN SPECIES	4462																ENSOPRG00000015318 #22
Tree shrew	MODERN SPECIES	4168																QRICH1 (ENSTBEG00000011120) #22	IMPDH2 (ENSTBEG00000011057)	NDUFAF3 (ENSTBEG00000011035) #23	ENSTBEG00000010999 #24
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Eulipotyphla	ANCESTRAL SPECIES	5									ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26
Common shrew	MODERN SPECIES	5652									C3orf62 (ENSSARG00000000077) #14	ENSSARG00000000075	IHO1 (ENSSARG00000000073)	KLHDC8B (ENSSARG00000000071) #17	LAMB2 (ENSSARG00000000065) #19	USP19 (ENSSARG00000000064) #20	QARS1 (ENSSARG00000000062) #21	QRICH1 (ENSSARG00000000061) #22	IMPDH2 (ENSSARG00000000060)	NDUFAF3 (ENSSARG00000000059) #23	WDR6 (ENSSARG00000000058) #25	P4HTM (ENSSARG00000000054) #26
Hedgehog	MODERN SPECIES	8310																QRICH1 (ENSEEUG00000006768) #22
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Suina	ANCESTRAL SPECIES	1	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163668
Chacoan peccary	MODERN SPECIES	950	DAG1 (ENSCWAG00000018804)	NICN1 (ENSCWAG00000018764) #7	AMT (ENSCWAG00000018363) #8	TCTA (ENSCWAG00000018314) #9	RHOA (ENSCWAG00000018291) #10	GPX1 (ENSCWAG00000018272) #11	USP4 (ENSCWAG00000018178) #13	C3orf62 (ENSCWAG00000018125) #14	IHO1 (ENSCWAG00000018076)	C3orf84 (ENSCWAG00000018023) #16	KLHDC8B (ENSCWAG00000018001) #17	CCDC71 (ENSCWAG00000017986) #18	LAMB2 (ENSCWAG00000017876) #19	USP19 (ENSCWAG00000017460) #20	QARS1 (ENSCWAG00000017330) #21	QRICH1 (ENSCWAG00000017279) #22	IMPDH2 (ENSCWAG00000017226)	NDUFAF3 (ENSCWAG00000017192) #23	DALRD3 (ENSCWAG00000017109) #24	WDR6 (ENSCWAG00000017019) #25	P4HTM (ENSCWAG00000016965) #26	ARIH2 (ENSCWAG00000016937) #27	SLC25A20 (ENSCWAG00000016889) #28	ENSCWAG00000016877	PRKAR2A (ENSCWAG00000016735) #29	IP6K2 (ENSCWAG00000016706) #30	NCKIPSD (ENSCWAG00000016529) #31	CELSR3 (ENSCWAG00000016266) #32	SLC26A6 (ENSCWAG00000015078) #33	TMEM89 (ENSCWAG00000015005) #34	UQCRC1 (ENSCWAG00000014870) #35
Artiodactyla_a	ANCESTRAL SPECIES	18	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Artiodactyla_b	ANCESTRAL SPECIES	21	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Cetacea	ANCESTRAL SPECIES	7	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	881																ENSPCTG00005022086 #22	IMPDH2 (ENSPCTG00005022090)	NDUFAF3 (ENSPCTG00005022096) #23	DALRD3 (ENSPCTG00005022107) #24	WDR6 (ENSPCTG00005022119) #25	P4HTM (ENSPCTG00005022128) #26	ARIH2 (ENSPCTG00005022146) #27
Sperm whale	MODERN SPECIES	9	ENSPCTG00005016243	ENSPCTG00005016171	ENSPCTG00005015811	ENSPCTG00005015622	NME6 (ENSPCTG00005015350)	SHISA5 (ENSPCTG00005015146)	PFKFB4 (ENSPCTG00005014608) #37	UCN2 (ENSPCTG00005014571) #36	UQCRC1 (ENSPCTG00005012845) #35	TMEM89 (ENSPCTG00005012811) #34	SLC26A6 (ENSPCTG00005012551) #33	ENSPCTG00005012504	SLC25A20 (ENSPCTG00005012420) #28	PRKAR2A (ENSPCTG00005012194) #29	QARS (ENSPCTG00005012087) #21	ENSPCTG00005012050 #22	C3orf62 (ENSPCTG00005012023) #14	ENSPCTG00005011977	IHO1 (ENSPCTG00005011792)	C3orf84 (ENSPCTG00005011705) #16	KLHDC8B (ENSPCTG00005011646) #17	AMT (ENSPCTG00005010530) #8	TCTA (ENSPCTG00005010398) #9	RHOA (ENSPCTG00005010333)	APEH (ENSPCTG00005010133)	ENSPCTG00005010094	ENSPCTG00005009970	INKA1 (ENSPCTG00005009924)	UBA7 (ENSPCTG00005009877)	TRAIP (ENSPCTG00005009789)	CAMKV (ENSPCTG00005009075)
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726.g	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Dolphin	MODERN SPECIES	1494						RHOA (ENSTTRG00000017370) #10	GPX1 (ENSTTRG00000017369) #11	USP4 (ENSTTRG00000017365) #13	ENSTTRG00000017364 #14	IHO1 (ENSTTRG00000017363)	KLHDC8B (ENSTTRG00000017361) #17	CCDC71 (ENSTTRG00000017360) #18	LAMB2 (ENSTTRG00000017357) #19	USP19 (ENSTTRG00000017355) #20	QARS1 (ENSTTRG00000017352) #21	QRICH1 (ENSTTRG00000017351) #22	IMPDH2 (ENSTTRG00000017349)	NDUFAF3 (ENSTTRG00000017348) #23	DALRD3 (ENSTTRG00000017347) #24	WDR6 (ENSTTRG00000017346) #25	P4HTM (ENSTTRG00000017345) #26	ARIH2 (ENSTTRG00000017344) #27	ENSTTRG00000021379	SLC25A20 (ENSTTRG00000017343) #28	PRKAR2A (ENSTTRG00000017342) #29	IP6K2 (ENSTTRG00000017341) #30	NCKIPSD (ENSTTRG00000017340) #31	CELSR3 (ENSTTRG00000017338) #32	TMEM89 (ENSTTRG00000017337) #34	UQCRC1 (ENSTTRG00000017336) #35	ENSTTRG00000017330
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726.g	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000160568.n #36
Vaquita	MODERN SPECIES	2	DAG1 (ENSPSNG00000013813)	ENSPSNG00000004157	NICN1 (ENSPSNG00000004182) #7	AMT (ENSPSNG00000004381) #8	TCTA (ENSPSNG00000004703) #9	RHOA (ENSPSNG00000004743) #10	GPX1 (ENSPSNG00000004763) #11	USP4 (ENSPSNG00000004797) #13	IHO1 (ENSPSNG00000004857)	C3orf84 (ENSPSNG00000004885) #16	KLHDC8B (ENSPSNG00000004916) #17	CCDC71 (ENSPSNG00000004946) #18	LAMB2 (ENSPSNG00000005009) #19	USP19 (ENSPSNG00000005218) #20	QARS1 (ENSPSNG00000005651) #21	QRICH1 (ENSPSNG00000005735) #22	ENSPSNG00000005779	NDUFAF3 (ENSPSNG00000005911) #23	DALRD3 (ENSPSNG00000005963) #24	WDR6 (ENSPSNG00000006056) #25	P4HTM (ENSPSNG00000006122) #26	ARIH2 (ENSPSNG00000006175) #27	SLC25A20 (ENSPSNG00000006261) #28	PRKAR2A (ENSPSNG00000006412) #29	IP6K2 (ENSPSNG00000006547) #30	NCKIPSD (ENSPSNG00000006619) #31	CELSR3 (ENSPSNG00000006685) #32	SLC26A6 (ENSPSNG00000006903) #33	TMEM89 (ENSPSNG00000007085) #34	UQCRC1 (ENSPSNG00000007140) #35	UCN2 (ENSPSNG00000007346) #36
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00860000135958	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726.g	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000160568.n #36
Narwhal	MODERN SPECIES	310	ENSMMNG00015013133	NICN1 (ENSMMNG00015013108) #7	AMT (ENSMMNG00015013041) #8	TCTA (ENSMMNG00015012991) #9	RHOA (ENSMMNG00015012980) #10	GPX1 (ENSMMNG00015012971) #11	USP4 (ENSMMNG00015012950) #13	C3orf62 (ENSMMNG00015012883) #14	IHO1 (ENSMMNG00015012868)	C3orf84 (ENSMMNG00015012850) #16	KLHDC8B (ENSMMNG00015012828) #17	CCDC71 (ENSMMNG00015012816) #18	LAMB2 (ENSMMNG00015012783) #19	USP19 (ENSMMNG00015012611) #20	QARS1 (ENSMMNG00015012503) #21	QRICH1 (ENSMMNG00015012459) #22	IMPDH2 (ENSMMNG00015012428)	NDUFAF3 (ENSMMNG00015012388) #23	DALRD3 (ENSMMNG00015012304) #24	WDR6 (ENSMMNG00015012270) #25	P4HTM (ENSMMNG00015012237) #26	ARIH2 (ENSMMNG00015012181) #27	SLC25A20 (ENSMMNG00015012135) #28	PRKAR2A (ENSMMNG00015012091) #29	IP6K2 (ENSMMNG00015012063) #30	NCKIPSD (ENSMMNG00015012044) #31	CELSR3 (ENSMMNG00015011980) #32	SLC26A6 (ENSMMNG00015011867) #33	TMEM89 (ENSMMNG00015011819) #34	UQCRC1 (ENSMMNG00015011795) #35	UCN2 (ENSMMNG00015011581) #36
Beluga whale	MODERN SPECIES	28	ENSDLEG00000015224	NICN1 (ENSDLEG00000015239) #7	AMT (ENSDLEG00000015323) #8	RHOA (ENSDLEG00000015960) #10	GPX1 (ENSDLEG00000015976) #11	USP4 (ENSDLEG00000016063) #13	CUNH3orf62 (ENSDLEG00000017307) #14	ENSDLEG00000017319	CCDC36 (ENSDLEG00000017335)	C3orf84 (ENSDLEG00000017359) #16	KLHDC8B (ENSDLEG00000017380) #17	CCDC71 (ENSDLEG00000017405) #18	LAMB2 (ENSDLEG00000017419) #19	USP19 (ENSDLEG00000017469) #20	QARS1 (ENSDLEG00000017603) #21	QRICH1 (ENSDLEG00000018099) #22	IMPDH2 (ENSDLEG00000018135)	NDUFAF3 (ENSDLEG00000018168) #23	DALRD3 (ENSDLEG00000018204) #24	WDR6 (ENSDLEG00000018228) #25	P4HTM (ENSDLEG00000018259) #26	ARIH2 (ENSDLEG00000018291) #27	ENSDLEG00000018315	SLC25A20 (ENSDLEG00000018329) #28	PRKAR2A (ENSDLEG00000018338) #29	IP6K2 (ENSDLEG00000018367) #30	NCKIPSD (ENSDLEG00000018395) #31	CELSR3 (ENSDLEG00000018506) #32	SLC26A6 (ENSDLEG00000019709) #33	TMEM89 (ENSDLEG00000020232) #34	UQCRC1 (ENSDLEG00000020239) #35
Blue whale	MODERN SPECIES	2	NICN1 (ENSBMSG00010010937) #7	AMT (ENSBMSG00010010835) #8	TCTA (ENSBMSG00010010765) #9	RHOA (ENSBMSG00010010749) #10	ENSBMSG00010010726 #11	USP4 (ENSBMSG00010010655) #13	C3orf62 (ENSBMSG00010010582) #14	ENSBMSG00010010572	IHO1 (ENSBMSG00010010547)	C3orf84 (ENSBMSG00010010524) #16	KLHDC8B (ENSBMSG00010010507) #17	CCDC71 (ENSBMSG00010010496) #18	LAMB2 (ENSBMSG00010010468) #19	USP19 (ENSBMSG00010010311) #20	QARS1 (ENSBMSG00010010201) #21	QRICH1 (ENSBMSG00010010177) #22	IMPDH2 (ENSBMSG00010010156)	NDUFAF3 (ENSBMSG00010010129) #23	DALRD3 (ENSBMSG00010010094) #24	WDR6 (ENSBMSG00010010069) #25	P4HTM (ENSBMSG00010010026) #26	ARIH2 (ENSBMSG00010009985) #27	ENSBMSG00010009972	SLC25A20 (ENSBMSG00010009954) #28	PRKAR2A (ENSBMSG00010009907) #29	IP6K2 (ENSBMSG00010009894) #30	NCKIPSD (ENSBMSG00010009865) #31	CELSR3 (ENSBMSG00010009819) #32	SLC26A6 (ENSBMSG00010009734) #33	TMEM89 (ENSBMSG00010009697) #34	UQCRC1 (ENSBMSG00010009681) #35
Pecora	ANCESTRAL SPECIES	17	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Yarkand deer	MODERN SPECIES	16	NICN1 (ENSCHYG00000022672) #7	AMT (ENSCHYG00000021143) #8	TCTA (ENSCHYG00000020985) #9	RHOA (ENSCHYG00000020943) #10	GPX1 (ENSCHYG00000020891) #11	USP4 (ENSCHYG00000020223) #13	C3orf62 (ENSCHYG00000020130) #14	ENSCHYG00000020109	ENSCHYG00000020073 #15	C3orf84 (ENSCHYG00000019991) #16	KLHDC8B (ENSCHYG00000019923) #17	CCDC71 (ENSCHYG00000019908) #18	LAMB2 (ENSCHYG00000018059) #19	USP19 (ENSCHYG00000017124) #20	QARS1 (ENSCHYG00000016793) #21	QRICH1 (ENSCHYG00000016705) #22	IMPDH2 (ENSCHYG00000016573)	NDUFAF3 (ENSCHYG00000016470) #23	DALRD3 (ENSCHYG00000016269) #24	WDR6 (ENSCHYG00000016106) #25	P4HTM (ENSCHYG00000015965) #26	ARIH2 (ENSCHYG00000015757) #27	ENSCHYG00000015710	SLC25A20 (ENSCHYG00000015575) #28	PRKAR2A (ENSCHYG00000015281) #29	IP6K2 (ENSCHYG00000015157) #30	NCKIPSD (ENSCHYG00000014934) #31	CELSR3 (ENSCHYG00000014491) #32	SLC26A6 (ENSCHYG00000013025) #33	TMEM89 (ENSCHYG00000012975) #34	UQCRC1 (ENSCHYG00000012877) #35
Percora_a	ANCESTRAL SPECIES	19	ENSGT01030000235142.a	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Bovidae	ANCESTRAL SPECIES	19	ENSGT01030000235142.a	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Bovinae	ANCESTRAL SPECIES	16	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000153769.E
Bos	ANCESTRAL SPECIES	16	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT01100000263480.a.b.b.a.a.b.b.a.a.b	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000153769.E
Bos_b	ANCESTRAL SPECIES	17	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT01100000263480.a.b.b.a.a.b.b.a.a.b	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000160568.n #36
Cow	MODERN SPECIES	14	NICN1 (ENSBTAG00000000387) #7	AMT (ENSBTAG00000002321) #8	TCTA (ENSBTAG00000022632) #9	RHOA (ENSBTAG00000004279) #10	GPX1 (ENSBTAG00000054195) #11	USP4 (ENSBTAG00000011899) #13	C22H3orf62 (ENSBTAG00000011894) #14	IHO1 (ENSBTAG00000009371)	C22H3orf84 (ENSBTAG00000000982) #16	KLHDC8B (ENSBTAG00000000981) #17	CCDC71 (ENSBTAG00000013932) #18	ENSBTAG00000055290 #19	LAMB2 (ENSBTAG00000022635) #19	USP19 (ENSBTAG00000018921) #20	QARS1 (ENSBTAG00000018928) #21	QRICH1 (ENSBTAG00000018924) #22	IMPDH2 (ENSBTAG00000031837)	NDUFAF3 (ENSBTAG00000018918) #23	DALRD3 (ENSBTAG00000018913) #24	WDR6 (ENSBTAG00000018910) #25	P4HTM (ENSBTAG00000005490) #26	ARIH2 (ENSBTAG00000005488) #27	SLC25A20 (ENSBTAG00000000191) #28	PRKAR2A (ENSBTAG00000014205) #29	IP6K2 (ENSBTAG00000021853) #30	NCKIPSD (ENSBTAG00000021850) #31	CELSR3 (ENSBTAG00000021846) #32	SLC26A6 (ENSBTAG00000038381) #33	TMEM89 (ENSBTAG00000021390) #34	UQCRC1 (ENSBTAG00000019096) #35	UCN2 (ENSBTAG00000019078) #36
Hybrid Bos Indicus	MODERN SPECIES	14	AMT (ENSBIXG00005011718) #8	TCTA (ENSBIXG00005007432) #9	ENSBIXG00005006787	RHOA (ENSBIXG00005011793) #10	GPX1 (ENSBIXG00005011815) #11	C3orf62 (ENSBIXG00005005956) #14	USP4 (ENSBIXG00005011888) #13	IHO1 (ENSBIXG00005011909)	C3orf84 (ENSBIXG00005001208) #16	KLHDC8B (ENSBIXG00005011961) #17	CCDC71 (ENSBIXG00005000414) #18	ENSBIXG00005002536 #19	LAMB2 (ENSBIXG00005016314) #19	USP19 (ENSBIXG00005017369) #20	QARS1 (ENSBIXG00005017449) #21	QRICH1 (ENSBIXG00005017495) #22	IMPDH2 (ENSBIXG00005002847)	NDUFAF3 (ENSBIXG00005002855) #23	DALRD3 (ENSBIXG00005017624) #24	P4HTM (ENSBIXG00005002875) #26	WDR6 (ENSBIXG00005017807) #25	ARIH2 (ENSBIXG00005002897) #27	ENSBIXG00005002903	ENSBIXG00005017902 #28	ENSBIXG00005017935	PRKAR2A (ENSBIXG00005018013) #29	IP6K2 (ENSBIXG00005018059) #30	NCKIPSD (ENSBIXG00005002932) #31	CELSR3 (ENSBIXG00005018136) #32	SLC26A6 (ENSBIXG00005018196) #33	TMEM89 (ENSBIXG00005018210) #34
Bos_a	ANCESTRAL SPECIES	9	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT01100000263480.a.b.b.a.a.b.b.a.a.b	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000153769.E
Domestic yak	MODERN SPECIES	14	NICN1 (ENSBGRG00000020735) #7	AMT (ENSBGRG00000020243) #8	TCTA (ENSBGRG00000020134) #9	ENSBGRG00000020118	RHOA (ENSBGRG00000020019) #10	GPX1 (ENSBGRG00000019961) #11	USP4 (ENSBGRG00000019272) #13	C3orf62 (ENSBGRG00000019210) #14	ENSBGRG00000019151 #15	C3orf84 (ENSBGRG00000019083) #16	KLHDC8B (ENSBGRG00000019038) #17	CCDC71 (ENSBGRG00000019022) #18	USP19 (ENSBGRG00000017987) #20	LAMB2 (ENSBGRG00000016632) #19	QARS1 (ENSBGRG00000015757) #21	QRICH1 (ENSBGRG00000015681) #22	IMPDH2 (ENSBGRG00000015395)	NDUFAF3 (ENSBGRG00000015330) #23	DALRD3 (ENSBGRG00000024128) #24	WDR6 (ENSBGRG00000024062) #25	P4HTM (ENSBGRG00000023980) #26	ARIH2 (ENSBGRG00000023826) #27	ENSBGRG00000023787	PRKAR2A (ENSBGRG00000023547) #29	IP6K2 (ENSBGRG00000023483) #30	NCKIPSD (ENSBGRG00000023323) #31	ENSBGRG00000023309 #32	SLC26A6 (ENSBGRG00000022432) #33	TMEM89 (ENSBGRG00000022364) #34	UQCRC1 (ENSBGRG00000022247) #35	ENSBGRG00000021394 #36
Wild yak	MODERN SPECIES	2401				RHOA (ENSBMUG00000014394) #10	GPX1 (ENSBMUG00000014390) #11	USP4 (ENSBMUG00000014366) #13	C3orf62 (ENSBMUG00000014327) #14	IHO1 (ENSBMUG00000014305)	C3orf84 (ENSBMUG00000014279) #16	KLHDC8B (ENSBMUG00000014264) #17	CCDC71 (ENSBMUG00000014262) #18	ENSBMUG00000014250 #19	LAMB2 (ENSBMUG00000014195) #19	USP19 (ENSBMUG00000014055) #20	QARS1 (ENSBMUG00000013897) #21	QRICH1 (ENSBMUG00000013833) #22	IMPDH2 (ENSBMUG00000013821)	NDUFAF3 (ENSBMUG00000013786) #23	DALRD3 (ENSBMUG00000013752) #24	WDR6 (ENSBMUG00000013729) #25	P4HTM (ENSBMUG00000013710) #26	ARIH2 (ENSBMUG00000013680) #27	SLC25A20 (ENSBMUG00000013606) #28	PRKAR2A (ENSBMUG00000013542) #29	IP6K2 (ENSBMUG00000013503) #30	NCKIPSD (ENSBMUG00000013484) #31	CELSR3 (ENSBMUG00000013264) #32	SLC26A6 (ENSBMUG00000012744) #33	TMEM89 (ENSBMUG00000012567) #34	UQCRC1 (ENSBMUG00000012561) #35	ENSBMUG00000012445
American bison	MODERN SPECIES	3218	ENSBBBG00000003033	NICN1 (ENSBBBG00000003031) #7	AMT (ENSBBBG00000003011) #8	TCTA (ENSBBBG00000008744) #9	RHOA (ENSBBBG00000013828) #10	GPX1 (ENSBBBG00000013819) #11	USP4 (ENSBBBG00000013809) #13	C3orf62 (ENSBBBG00000002946) #14	IHO1 (ENSBBBG00000013760)	C3orf84 (ENSBBBG00000013731) #16	KLHDC8B (ENSBBBG00000002923) #17	CCDC71 (ENSBBBG00000002918) #18	LAMB2 (ENSBBBG00000013717) #19	USP19 (ENSBBBG00000013677) #20	QARS1 (ENSBBBG00000002795) #21	QRICH1 (ENSBBBG00000013477) #22	IMPDH2 (ENSBBBG00000002761)	NDUFAF3 (ENSBBBG00000013435) #23	DALRD3 (ENSBBBG00000013423) #24	WDR6 (ENSBBBG00000013397) #25	P4HTM (ENSBBBG00000013372) #26	ARIH2 (ENSBBBG00000013331) #27	SLC25A20 (ENSBBBG00000013306) #28	PRKAR2A (ENSBBBG00000001622) #29	IP6K2 (ENSBBBG00000013273) #30	NCKIPSD (ENSBBBG00000013266) #31	CELSR3 (ENSBBBG00000001641) #32	SLC26A6 (ENSBBBG00000013214) #33	TMEM89 (ENSBBBG00000013092) #34	UQCRC1 (ENSBBBG00000001688) #35	ENSBBBG00000002621
Caprinae	ANCESTRAL SPECIES	15	ENSGT01030000235142.a	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b.jb #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Goat	MODERN SPECIES	14	ENSCHIG00000009691	NICN1 (ENSCHIG00000010612) #7	AMT (ENSCHIG00000017556) #8	TCTA (ENSCHIG00000014306) #9	RHOA (ENSCHIG00000013894) #10	GPX1 (ENSCHIG00000017983) #11	USP4 (ENSCHIG00000017572) #13	C3orf62 (ENSCHIG00000009739) #14	IHO1 (ENSCHIG00000009674)	C3orf84 (ENSCHIG00000015744) #16	KLHDC8B (ENSCHIG00000022366) #17	CCDC71 (ENSCHIG00000012608) #18	LAMB2 (ENSCHIG00000015310) #19	USP19 (ENSCHIG00000019576) #20	QARS1 (ENSCHIG00000022953) #21	QRICH1 (ENSCHIG00000016705) #22	IMPDH2 (ENSCHIG00000011336)	ENSCHIG00000008827	NDUFAF3 (ENSCHIG00000022087) #23	DALRD3 (ENSCHIG00000018628) #24	WDR6 (ENSCHIG00000003628) #25	P4HTM (ENSCHIG00000013169) #26	ARIH2 (ENSCHIG00000027089) #27	SLC25A20 (ENSCHIG00000010462) #28	PRKAR2A (ENSCHIG00000023269) #29	IP6K2 (ENSCHIG00000016624) #30	NCKIPSD (ENSCHIG00000022149) #31	CELSR3 (ENSCHIG00000018245) #32	SLC26A6 (ENSCHIG00000024603) #33	TMEM89 (ENSCHIG00000023503) #34	UQCRC1 (ENSCHIG00000015164) #35
Rambouillet Sheep	MODERN SPECIES	10	NICN1 (ENSOARG00020020154) #7	AMT (ENSOARG00020020285) #8	TCTA (ENSOARG00020020854) #9	RHOA (ENSOARG00020020892) #10	GPX1 (ENSOARG00020020922) #11	USP4 (ENSOARG00020020981) #13	C3orf62 (ENSOARG00020021187) #14	ENSOARG00020021222 #15	C3orf84 (ENSOARG00020021267) #16	KLHDC8B (ENSOARG00020021328) #17	CCDC71 (ENSOARG00020021366) #18	ENSOARG00020021399 #19	LAMB2 (ENSOARG00020021611) #19	USP19 (ENSOARG00020021723) #20	QARS1 (ENSOARG00020022319) #21	QRICH1 (ENSOARG00020022369) #22	IMPDH2 (ENSOARG00020022397)	NDUFAF3 (ENSOARG00020022430) #23	DALRD3 (ENSOARG00020022500) #24	WDR6 (ENSOARG00020022626) #25	P4HTM (ENSOARG00020022705) #26	ARIH2 (ENSOARG00020022759) #27	SLC25A20 (ENSOARG00020022821) #28	PRKAR2A (ENSOARG00020022886) #29	IP6K2 (ENSOARG00020023052) #30	NCKIPSD (ENSOARG00020023097) #31	CELSR3 (ENSOARG00020023126) #32	SLC26A6 (ENSOARG00020023288) #33	TMEM89 (ENSOARG00020023896) #34	UQCRC1 (ENSOARG00020023908) #35	ENSOARG00020023939
Siberian musk deer	MODERN SPECIES	1221	NICN1 (ENSMMSG00000017077) #7	AMT (ENSMMSG00000015660) #8	TCTA (ENSMMSG00000015587) #9	RHOA (ENSMMSG00000015567) #10	ENSMMSG00000015545 #11	USP4 (ENSMMSG00000015420) #13	C3orf62 (ENSMMSG00000015397) #14	IHO1 (ENSMMSG00000015321)	C3orf84 (ENSMMSG00000015293) #16	KLHDC8B (ENSMMSG00000015273) #17	CCDC71 (ENSMMSG00000015262) #18	ENSMMSG00000015241 #19	LAMB2 (ENSMMSG00000015126) #19	USP19 (ENSMMSG00000014237) #20	QARS1 (ENSMMSG00000014108) #21	QRICH1 (ENSMMSG00000014082) #22	IMPDH2 (ENSMMSG00000013996)	NDUFAF3 (ENSMMSG00000013945) #23	DALRD3 (ENSMMSG00000013900) #24	WDR6 (ENSMMSG00000013855) #25	P4HTM (ENSMMSG00000013832) #26	ARIH2 (ENSMMSG00000013782) #27	ENSMMSG00000013769	SLC25A20 (ENSMMSG00000023168) #28	ENSMMSG00000023164	ENSMMSG00000023160	ENSMMSG00000023156	PRKAR2A (ENSMMSG00000023137) #29	IP6K2 (ENSMMSG00000023124) #30	NCKIPSD (ENSMMSG00000023115) #31	CELSR3 (ENSMMSG00000023095) #32
Camelidae	ANCESTRAL SPECIES	7	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Arabian camel	MODERN SPECIES	8	BSN (ENSCDRG00005005743)	DAG1 (ENSCDRG00005005724)	NICN1 (ENSCDRG00005005671) #7	AMT (ENSCDRG00005005389) #8	TCTA (ENSCDRG00005005330) #9	RHOA (ENSCDRG00005005306) #10	ENSCDRG00005005290 #11	USP4 (ENSCDRG00005005199) #13	C3orf62 (ENSCDRG00005005169) #14	IHO1 (ENSCDRG00005005122)	C3orf84 (ENSCDRG00005005088) #16	KLHDC8B (ENSCDRG00005005058) #17	CCDC71 (ENSCDRG00005005037) #18	LAMB2 (ENSCDRG00005004573) #19	QARS1 (ENSCDRG00005004349) #21	QRICH1 (ENSCDRG00005004282) #22	IMPDH2 (ENSCDRG00005004218)	NDUFAF3 (ENSCDRG00005004181) #23	DALRD3 (ENSCDRG00005004060) #24	WDR6 (ENSCDRG00005003990) #25	P4HTM (ENSCDRG00005003922) #26	ARIH2 (ENSCDRG00005003826) #27	PRKAR2A (ENSCDRG00005003620) #29	IP6K2 (ENSCDRG00005003526) #30	NCKIPSD (ENSCDRG00005003450) #31	CELSR3 (ENSCDRG00005014606) #32	SLC26A6 (ENSCDRG00005013706) #33	TMEM89 (ENSCDRG00005013618) #34	UQCRC1 (ENSCDRG00005013459) #35	UCN2 (ENSCDRG00005013273) #36	PFKFB4 (ENSCDRG00005013082) #37
Alpaca	MODERN SPECIES	2220													ENSVPAG00000009668 #19	USP19 (ENSVPAG00000009667) #20	QARS1 (ENSVPAG00000009664) #21	QRICH1 (ENSVPAG00000009662) #22	ENSVPAG00000009661 #23	ENSVPAG00000009657 #25	ARIH2 (ENSVPAG00000009656) #27	ENSVPAG00000015469	SLC25A20 (ENSVPAG00000009655) #28
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00910000147297	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Carnivora	ANCESTRAL SPECIES	6	ENSGT00910000147297	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Caniformia	ANCESTRAL SPECIES	4	ENSGT00910000147297	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b.pb.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Ursidae	ANCESTRAL SPECIES	11	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b.pb.b #10	ENSGT00940000156150.l #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000160568.n #36
Ursus	ANCESTRAL SPECIES	5	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b.pb.b #10	ENSGT00940000156150.l #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000160568.n #36
American black bear	MODERN SPECIES	339																QRICH1 (ENSUAMG00000017837) #22	IMPDH2 (ENSUAMG00000017839)	NDUFAF3 (ENSUAMG00000017841) #23	ENSUAMG00000017846 #24	WDR6 (ENSUAMG00000017852) #25	P4HTM (ENSUAMG00000017856) #26	ARIH2 (ENSUAMG00000017880) #27	SLC25A20 (ENSUAMG00000017881) #28	IP6K2 (ENSUAMG00000017883) #30	NCKIPSD (ENSUAMG00000017885) #31	CELSR3 (ENSUAMG00000017886) #32	SLC26A6 (ENSUAMG00000017890) #33	TMEM89 (ENSUAMG00000018613) #34	UQCRC1 (ENSUAMG00000018614) #35	UCN2 (ENSUAMG00000018636) #36	PFKFB4 (ENSUAMG00000018650) #37
Polar bear	MODERN SPECIES	255	NICN1 (ENSUMAG00000022819) #7	AMT (ENSUMAG00000022820) #8	TCTA (ENSUMAG00000022824) #9	RHOA (ENSUMAG00000022826) #10	GPX1 (ENSUMAG00000022827) #11	ENSUMAG00000022834 #13	USP4 (ENSUMAG00000022843) #13	C3orf62 (ENSUMAG00000022863) #14	IHO1 (ENSUMAG00000022867)	C3orf84 (ENSUMAG00000022882) #16	KLHDC8B (ENSUMAG00000022885) #17	CCDC71 (ENSUMAG00000022889) #18	LAMB2 (ENSUMAG00000022957) #19	USP19 (ENSUMAG00000023181) #20	QARS1 (ENSUMAG00000023208) #21	QRICH1 (ENSUMAG00000023411) #22	IMPDH2 (ENSUMAG00000023416)	NDUFAF3 (ENSUMAG00000023429) #23	ENSUMAG00000023436 #24	WDR6 (ENSUMAG00000023456) #25	P4HTM (ENSUMAG00000023465) #26	ARIH2 (ENSUMAG00000023482) #27	SLC25A20 (ENSUMAG00000023485) #28	PRKAR2A (ENSUMAG00000000109) #29	IP6K2 (ENSUMAG00000000479) #30	NCKIPSD (ENSUMAG00000000487) #31	ENSUMAG00000000521	SLC26A6 (ENSUMAG00000000551) #33	TMEM89 (ENSUMAG00000000570) #34	UQCRC1 (ENSUMAG00000000583) #35	UCN2 (ENSUMAG00000000605) #36
Giant Panda	MODERN SPECIES	14	DAG1 (ENSAMEG00000024430)	NICN1 (ENSAMEG00000012544) #7	AMT (ENSAMEG00000012551) #8	ENSAMEG00000012580 #9	RHOA (ENSAMEG00000012584) #10	GPX1 (ENSAMEG00000012590) #11	USP4 (ENSAMEG00000012591) #13	C3orf62 (ENSAMEG00000012680) #14	IHO1 (ENSAMEG00000012682)	C3orf84 (ENSAMEG00000012687) #16	KLHDC8B (ENSAMEG00000030033) #17	CCDC71 (ENSAMEG00000020173) #18	LAMB2 (ENSAMEG00000012708) #19	USP19 (ENSAMEG00000012785) #20	QARS1 (ENSAMEG00000012838) #21	QRICH1 (ENSAMEG00000012907) #22	IMPDH2 (ENSAMEG00000012929)	NDUFAF3 (ENSAMEG00000012966) #23	DALRD3 (ENSAMEG00000012976) #24	WDR6 (ENSAMEG00000013002) #25	P4HTM (ENSAMEG00000026267) #26	ARIH2 (ENSAMEG00000013035) #27	SLC25A20 (ENSAMEG00000000469) #28	PRKAR2A (ENSAMEG00000000490) #29	IP6K2 (ENSAMEG00000000516) #30	NCKIPSD (ENSAMEG00000000528) #31	CELSR3 (ENSAMEG00000000572) #32	SLC26A6 (ENSAMEG00000000655) #33	TMEM89 (ENSAMEG00000000704) #34	UQCRC1 (ENSAMEG00000000706) #35	UCN2 (ENSAMEG00000018892) #36
Mustelinae	ANCESTRAL SPECIES	10	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b.pb.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
American mink	MODERN SPECIES	58	DAG1 (ENSNVIG00000023739)	NICN1 (ENSNVIG00000023731) #7	AMT (ENSNVIG00000023698) #8	TCTA (ENSNVIG00000023696) #9	ENSNVIG00000023695	GPX1 (ENSNVIG00000023693) #11	USP4 (ENSNVIG00000023683) #13	C3orf62 (ENSNVIG00000023679) #14	IHO1 (ENSNVIG00000023670)	C3orf84 (ENSNVIG00000023667) #16	KLHDC8B (ENSNVIG00000023665) #17	CCDC71 (ENSNVIG00000023664) #18	LAMB2 (ENSNVIG00000023651) #19	USP19 (ENSNVIG00000023521) #20	QARS1 (ENSNVIG00000023503) #21	QRICH1 (ENSNVIG00000023489) #22	IMPDH2 (ENSNVIG00000023475)	NDUFAF3 (ENSNVIG00000023469) #23	DALRD3 (ENSNVIG00000023465) #24	WDR6 (ENSNVIG00000023458) #25	ENSNVIG00000023456	P4HTM (ENSNVIG00000023452) #26	ARIH2 (ENSNVIG00000023449) #27	SLC25A20 (ENSNVIG00000023438) #28	PRKAR2A (ENSNVIG00000023416) #29	IP6K2 (ENSNVIG00000023408) #30	NCKIPSD (ENSNVIG00000023402) #31	CELSR3 (ENSNVIG00000023375) #32	SLC26A6 (ENSNVIG00000023334) #33	TMEM89 (ENSNVIG00000023332) #34	UQCRC1 (ENSNVIG00000023325) #35
Ferret	MODERN SPECIES	238	BSN (ENSMPUG00000013782)	DAG1 (ENSMPUG00000013807)	NICN1 (ENSMPUG00000013809) #7	AMT (ENSMPUG00000013810) #8	TCTA (ENSMPUG00000013838) #9	RHOA (ENSMPUG00000013840) #10	GPX1 (ENSMPUG00000013843) #11	USP4 (ENSMPUG00000013846) #13	IHO1 (ENSMPUG00000013850)	C3orf84 (ENSMPUG00000013861) #16	KLHDC8B (ENSMPUG00000013869) #17	CCDC71 (ENSMPUG00000019649) #18	LAMB2 (ENSMPUG00000013872) #19	USP19 (ENSMPUG00000014117) #20	QARS1 (ENSMPUG00000014198) #21	QRICH1 (ENSMPUG00000014264) #22	NDUFAF3 (ENSMPUG00000014271) #23	DALRD3 (ENSMPUG00000014288) #24	WDR6 (ENSMPUG00000014318) #25	ENSMPUG00000014321	ARIH2 (ENSMPUG00000014344) #27	SLC25A20 (ENSMPUG00000014350) #28	PRKAR2A (ENSMPUG00000014376) #29	IP6K2 (ENSMPUG00000014413) #30	NCKIPSD (ENSMPUG00000014415) #31	CELSR3 (ENSMPUG00000014422) #32	SLC26A6 (ENSMPUG00000014428) #33	UQCRC1 (ENSMPUG00000014540) #35	ENSMPUG00000014544	PFKFB4 (ENSMPUG00000014914) #37	SHISA5 (ENSMPUG00000014918)
Canidae	ANCESTRAL SPECIES		ENSGT00910000147297	ENSGT00390000001505 #7	ENSGT00940000157524.a #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b.ob #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000013951.db.a	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836.f #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00620000087961.a.b.a.a.a.b.f	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524.a #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b.ob #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000013951.db.a	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836.e #29	ENSGT00940000154836.f #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34
Dog	MODERN SPECIES	12	APEH (ENSCAFG00845025730)	BSN (ENSCAFG00845025871)	DAG1 (ENSCAFG00845025980)	AMT (ENSCAFG00845026162) #8	TCTA (ENSCAFG00845026862) #9	RHOA (ENSCAFG00845026916) #10	GPX1 (ENSCAFG00845027003) #11	USP4 (ENSCAFG00845027080) #13	C3orf62 (ENSCAFG00845027263) #14	IHO1 (ENSCAFG00845027331)	C20H3orf84 (ENSCAFG00845027426) #16	KLHDC8B (ENSCAFG00845027453) #17	LAMB2 (ENSCAFG00845027640) #19	USP19 (ENSCAFG00845028360) #20	QARS1 (ENSCAFG00845029059) #21	QRICH1 (ENSCAFG00845029132) #22	IMPDH2 (ENSCAFG00845029196)	NDUFAF3 (ENSCAFG00845029303) #23	DALRD3 (ENSCAFG00845029364) #24	WDR6 (ENSCAFG00845029474) #25	ENSCAFG00845029540	P4HTM (ENSCAFG00845029561) #26	ARIH2 (ENSCAFG00845029611) #27	SLC25A20 (ENSCAFG00845029742) #28	PRKAR2A (ENSCAFG00845029914) #29	ENSCAFG00845030093	IP6K2 (ENSCAFG00845030115) #30	NCKIPSD (ENSCAFG00845030141) #31	CELSR3 (ENSCAFG00845030576) #32	SLC26A6 (ENSCAFG00845030951) #33	TMEM89 (ENSCAFG00845030964) #34
Dingo	MODERN SPECIES	401	BSN (ENSCAFG00020021112)	DAG1 (ENSCAFG00020021107)	NICN1 (ENSCAFG00020021102) #7	AMT (ENSCAFG00020021037) #8	TCTA (ENSCAFG00020021023) #9	ENSCAFG00020021020 #10	GPX1 (ENSCAFG00020021012) #11	USP4 (ENSCAFG00020021004) #13	C3orf62 (ENSCAFG00020021003) #14	IHO1 (ENSCAFG00020021001)	C3orf84 (ENSCAFG00020021000) #16	KLHDC8B (ENSCAFG00020020998) #17	LAMB2 (ENSCAFG00020020994) #19	USP19 (ENSCAFG00020020986) #20	QARS1 (ENSCAFG00020020980) #21	QRICH1 (ENSCAFG00020020975) #22	IMPDH2 (ENSCAFG00020020966)	NDUFAF3 (ENSCAFG00020020962) #23	DALRD3 (ENSCAFG00020020957) #24	ENSCAFG00020020950	WDR6 (ENSCAFG00020020949) #25	P4HTM (ENSCAFG00020020941) #26	ARIH2 (ENSCAFG00020020933) #27	SLC25A20 (ENSCAFG00020020928) #28	ENSCAFG00020020925 #29	ENSCAFG00020020785 #29	IP6K2 (ENSCAFG00020020778) #30	NCKIPSD (ENSCAFG00020020775) #31	CELSR3 (ENSCAFG00020020726) #32	SLC26A6 (ENSCAFG00020020707) #33	TMEM89 (ENSCAFG00020020702) #34
Red fox	MODERN SPECIES	5	NICN1 (ENSVVUG00000029031) #7	AMT (ENSVVUG00000029036) #8	TCTA (ENSVVUG00000029052) #9	RHOA (ENSVVUG00000029053) #10	GPX1 (ENSVVUG00000029054) #11	USP4 (ENSVVUG00000029055) #13	C3orf62 (ENSVVUG00000029056) #14	CCDC36 (ENSVVUG00000029057)	ENSVVUG00000029059	C3orf84 (ENSVVUG00000029060) #16	KLHDC8B (ENSVVUG00000029061) #17	CCDC71 (ENSVVUG00000029062) #18	LAMB2 (ENSVVUG00000029063) #19	USP19 (ENSVVUG00000029068) #20	QARS1 (ENSVVUG00000029158) #21	QRICH1 (ENSVVUG00000029220) #22	NDUFAF3 (ENSVVUG00000029274) #23	WDR6 (ENSVVUG00000029289) #25	ENSVVUG00000029294	P4HTM (ENSVVUG00000029297) #26	ARIH2 (ENSVVUG00000029314) #27	SLC25A20 (ENSVVUG00000029398) #28	PRKAR2A (ENSVVUG00000029410) #29	ENSVVUG00000029412	IP6K2 (ENSVVUG00000029413) #30	NCKIPSD (ENSVVUG00000029416) #31	CELSR3 (ENSVVUG00000029449) #32	SLC26A6 (ENSVVUG00000029593) #33	TMEM89 (ENSVVUG00000029617) #34	UQCRC1 (ENSVVUG00000029619) #35	UCN2 (ENSVVUG00000029730) #36
Felidae	ANCESTRAL SPECIES	17	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Panthera	ANCESTRAL SPECIES	1	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645.h #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Panthera_a	ANCESTRAL SPECIES		ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645.h #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
lion	MODERN SPECIES	2	DAG1 (ENSPLOG00000018448)	ENSPLOG00000018430	NICN1 (ENSPLOG00000018373) #7	AMT (ENSPLOG00000018117) #8	TCTA (ENSPLOG00000018024) #9	RHOA (ENSPLOG00000017993) #10	GPX1 (ENSPLOG00000017953) #11	USP4 (ENSPLOG00000017665) #13	C3orf62 (ENSPLOG00000017607) #14	IHO1 (ENSPLOG00000017527)	C3orf84 (ENSPLOG00000017456) #16	KLHDC8B (ENSPLOG00000017405) #17	CCDC71 (ENSPLOG00000017365) #18	USP19 (ENSPLOG00000016691) #20	QARS1 (ENSPLOG00000016578) #21	QRICH1 (ENSPLOG00000016535) #22	IMPDH2 (ENSPLOG00000016432)	NDUFAF3 (ENSPLOG00000016348) #23	DALRD3 (ENSPLOG00000016289) #24	WDR6 (ENSPLOG00000016241) #25	P4HTM (ENSPLOG00000015987) #26	ARIH2 (ENSPLOG00000015916) #27	SLC25A20 (ENSPLOG00000015840) #28	PRKAR2A (ENSPLOG00000015681) #29	IP6K2 (ENSPLOG00000015638) #30	NCKIPSD (ENSPLOG00000015596) #31	CELSR3 (ENSPLOG00000015223) #32	SLC26A6 (ENSPLOG00000015057) #33	TMEM89 (ENSPLOG00000015026) #34	UQCRC1 (ENSPLOG00000014887) #35	UCN2 (ENSPLOG00000013772) #36
leopard	MODERN SPECIES	68	DAG1 (ENSPPRG00000022512)	ENSPPRG00000014445	NICN1 (ENSPPRG00000025013) #7	AMT (ENSPPRG00000024852) #8	TCTA (ENSPPRG00000024728) #9	RHOA (ENSPPRG00000024656) #10	ENSPPRG00000024456 #13	C3orf62 (ENSPPRG00000024416) #14	IHO1 (ENSPPRG00000024255)	C3orf84 (ENSPPRG00000024113) #16	KLHDC8B (ENSPPRG00000023840) #17	LAMB2 (ENSPPRG00000023171) #19	USP19 (ENSPPRG00000003739) #20	QARS1 (ENSPPRG00000005221) #21	ENSPPRG00000005505	QRICH1 (ENSPPRG00000005820) #22	IMPDH2 (ENSPPRG00000006003)	NDUFAF3 (ENSPPRG00000006073) #23	DALRD3 (ENSPPRG00000006675) #24	WDR6 (ENSPPRG00000007146) #25	ENSPPRG00000007287	P4HTM (ENSPPRG00000007613) #26	ARIH2 (ENSPPRG00000008113) #27	SLC25A20 (ENSPPRG00000008373) #28	PRKAR2A (ENSPPRG00000009071) #29	IP6K2 (ENSPPRG00000010669) #30	NCKIPSD (ENSPPRG00000011420) #31	CELSR3 (ENSPPRG00000012846) #32	SLC26A6 (ENSPPRG00000024614) #33	TMEM89 (ENSPPRG00000024453) #34	UQCRC1 (ENSPPRG00000024395) #35
Tiger	MODERN SPECIES	281	APEH (ENSPTIG00000018977)	DAG1 (ENSPTIG00000018919)	NICN1 (ENSPTIG00000018906) #7	AMT (ENSPTIG00000018699) #8	TCTA (ENSPTIG00000018655) #9	RHOA (ENSPTIG00000018631) #10	GPX1 (ENSPTIG00000018624) #11	USP4 (ENSPTIG00000018516) #13	C3orf62 (ENSPTIG00000018499) #14	IHO1 (ENSPTIG00000018424)	C3orf84 (ENSPTIG00000018411) #16	KLHDC8B (ENSPTIG00000018386) #17	LAMB2 (ENSPTIG00000018293) #19	USP19 (ENSPTIG00000018061) #20	QARS1 (ENSPTIG00000017922) #21	QRICH1 (ENSPTIG00000017901) #22	IMPDH2 (ENSPTIG00000017887)	NDUFAF3 (ENSPTIG00000017874) #23	DALRD3 (ENSPTIG00000017798) #24	WDR6 (ENSPTIG00000017782) #25	P4HTM (ENSPTIG00000017764) #26	ARIH2 (ENSPTIG00000017747) #27	SLC25A20 (ENSPTIG00000017596) #28	PRKAR2A (ENSPTIG00000017551) #29	IP6K2 (ENSPTIG00000017531) #30	NCKIPSD (ENSPTIG00000017444) #31	CELSR3 (ENSPTIG00000017215) #32	SLC26A6 (ENSPTIG00000016768) #33	TMEM89 (ENSPTIG00000016694) #34	UQCRC1 (ENSPTIG00000016678) #35	UCN2 (ENSPTIG00000006606) #36
Cat	MODERN SPECIES	1	DAG1 (ENSFCAG00000043206)	NICN1 (ENSFCAG00000009857) #7	AMT (ENSFCAG00000042786) #8	TCTA (ENSFCAG00000025429) #9	RHOA (ENSFCAG00000027456) #10	GPX1 (ENSFCAG00000025038) #11	USP4 (ENSFCAG00000009853) #13	CA2H3orf62 (ENSFCAG00000025844) #14	IHO1 (ENSFCAG00000009850)	CA2H3orf84 (ENSFCAG00000023457) #16	KLHDC8B (ENSFCAG00000009849) #17	CCDC71 (ENSFCAG00000039529) #18	LAMB2 (ENSFCAG00000009848) #19	USP19 (ENSFCAG00000009847) #20	QARS1 (ENSFCAG00000009846) #21	QRICH1 (ENSFCAG00000009845) #22	IMPDH2 (ENSFCAG00000009844)	NDUFAF3 (ENSFCAG00000009843) #23	DALRD3 (ENSFCAG00000009842) #24	WDR6 (ENSFCAG00000029509) #25	P4HTM (ENSFCAG00000009840) #26	ARIH2 (ENSFCAG00000009839) #27	SLC25A20 (ENSFCAG00000029832) #28	PRKAR2A (ENSFCAG00000027410) #29	IP6K2 (ENSFCAG00000022063) #30	NCKIPSD (ENSFCAG00000024490) #31	CELSR3 (ENSFCAG00000002102) #32	SLC26A6 (ENSFCAG00000028307) #33	TMEM89 (ENSFCAG00000032902) #34	UQCRC1 (ENSFCAG00000002100) #35	PFKFB4 (ENSFCAG00000002096) #37
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Chiroptera	ANCESTRAL SPECIES	19	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00390000009949	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Microchiroptera	ANCESTRAL SPECIES	16	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000160568.n #36
Greater horseshoe bat	MODERN SPECIES	8	NICN1 (ENSRFEG00010005912) #7	AMT (ENSRFEG00010006159) #8	TCTA (ENSRFEG00010006341) #9	RHOA (ENSRFEG00010006365) #10	GPX1 (ENSRFEG00010006388) #11	USP4 (ENSRFEG00010006437) #13	C3orf62 (ENSRFEG00010006582) #14	IHO1 (ENSRFEG00010006606)	C3orf84 (ENSRFEG00010006639) #16	KLHDC8B (ENSRFEG00010006686) #17	CCDC71 (ENSRFEG00010006704) #18	ENSRFEG00010006748 #19	LAMB2 (ENSRFEG00010006962) #19	USP19 (ENSRFEG00010007084) #20	QARS1 (ENSRFEG00010007205) #21	QRICH1 (ENSRFEG00010007287) #22	IMPDH2 (ENSRFEG00010007338)	NDUFAF3 (ENSRFEG00010007493) #23	DALRD3 (ENSRFEG00010007609) #24	WDR6 (ENSRFEG00010008055) #25	P4HTM (ENSRFEG00010007933) #26	ARIH2 (ENSRFEG00010008090) #27	SLC25A20 (ENSRFEG00010008130) #28	PRKAR2A (ENSRFEG00010008201) #29	IP6K2 (ENSRFEG00010008244) #30	NCKIPSD (ENSRFEG00010008286) #31	CELSR3 (ENSRFEG00010008356) #32	SLC26A6 (ENSRFEG00010008546) #33	TMEM89 (ENSRFEG00010008682) #34	UQCRC1 (ENSRFEG00010008721) #35	UCN2 (ENSRFEG00010008931) #36
Microbat	MODERN SPECIES	1686															QARS1 (ENSMLUG00000013976) #21	QRICH1 (ENSMLUG00000013973) #22	IMPDH2 (ENSMLUG00000013965)	NDUFAF3 (ENSMLUG00000025084) #23	ENSMLUG00000022625 #24	WDR6 (ENSMLUG00000013959) #25	P4HTM (ENSMLUG00000013953) #26	ARIH2 (ENSMLUG00000013946) #27	SLC25A20 (ENSMLUG00000013931) #28	PRKAR2A (ENSMLUG00000016288) #29	IP6K2 (ENSMLUG00000013358) #30
Megabat	MODERN SPECIES	19	APEH (ENSPVAG00000008750)	BSN (ENSPVAG00000008748)	DAG1 (ENSPVAG00000008746)	NICN1 (ENSPVAG00000008742) #7	AMT (ENSPVAG00000008741) #8	TCTA (ENSPVAG00000008739) #9	RHOA (ENSPVAG00000008738) #10	GPX1 (ENSPVAG00000008736) #11	USP4 (ENSPVAG00000008735) #13	C3orf62 (ENSPVAG00000008734) #14	IHO1 (ENSPVAG00000008733)	KLHDC8B (ENSPVAG00000008730) #17	LAMB2 (ENSPVAG00000008726) #19	USP19 (ENSPVAG00000008723) #20	QARS1 (ENSPVAG00000008720) #21	QRICH1 (ENSPVAG00000008718) #22	IMPDH2 (ENSPVAG00000008715)	NDUFAF3 (ENSPVAG00000008713) #23	DALRD3 (ENSPVAG00000008710) #24	WDR6 (ENSPVAG00000008708) #25	P4HTM (ENSPVAG00000008706) #26	ARIH2 (ENSPVAG00000008705) #27	ENSPVAG00000024251	SLC25A20 (ENSPVAG00000008703) #28	PRKAR2A (ENSPVAG00000008700) #29
Equus	ANCESTRAL SPECIES	5	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000164003	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000163668
Horse	MODERN SPECIES	7	APEH (ENSECAG00000012420)	BSN (ENSECAG00000008283)	ENSECAG00000058735	DAG1 (ENSECAG00000009665)	NICN1 (ENSECAG00000011269) #7	AMT (ENSECAG00000012159) #8	TCTA (ENSECAG00000017355) #9	RHOA (ENSECAG00000033791) #10	USP4 (ENSECAG00000018624) #13	IHO1 (ENSECAG00000057595)	CCDC71 (ENSECAG00000021792) #18	KLHDC8B (ENSECAG00000020454) #17	LAMB2 (ENSECAG00000021805) #19	USP19 (ENSECAG00000016554) #20	QARS1 (ENSECAG00000000809) #21	QRICH1 (ENSECAG00000042686) #22	NDUFAF3 (ENSECAG00000019013) #23	IMPDH2 (ENSECAG00000006885)	DALRD3 (ENSECAG00000020436) #24	WDR6 (ENSECAG00000023907) #25	P4HTM (ENSECAG00000003137) #26	ARIH2 (ENSECAG00000010851) #27	SLC25A20 (ENSECAG00000019650) #28	ENSECAG00000052282	ENSECAG00000046577	ENSECAG00000048651	PRKAR2A (ENSECAG00000027868) #29	ENSECAG00000055560	ENSECAG00000055508	IP6K2 (ENSECAG00000006875) #30	NCKIPSD (ENSECAG00000012037) #31
Donkey	MODERN SPECIES	13	BSN (ENSEASG00005011503)	DAG1 (ENSEASG00005011493)	NICN1 (ENSEASG00005011490) #7	AMT (ENSEASG00005011487) #8	TCTA (ENSEASG00005037396) #9	ENSEASG00005038337	GPX1 (ENSEASG00005036373) #11	USP4 (ENSEASG00005011232) #13	C3orf62 (ENSEASG00005023591) #14	IHO1 (ENSEASG00005027665)	KLHDC8B (ENSEASG00005011155) #17	CCDC71 (ENSEASG00005011154) #18	LAMB2 (ENSEASG00005010965) #19	USP19 (ENSEASG00005010828) #20	QARS1 (ENSEASG00005010497) #21	QRICH1 (ENSEASG00005010463) #22	IMPDH2 (ENSEASG00005010445)	NDUFAF3 (ENSEASG00005033606) #23	DALRD3 (ENSEASG00005010427) #24	WDR6 (ENSEASG00005010422) #25	P4HTM (ENSEASG00005010415) #26	ARIH2 (ENSEASG00005010381) #27	SLC25A20 (ENSEASG00005010354) #28	PRKAR2A (ENSEASG00005010299) #29	IP6K2 (ENSEASG00005010284) #30	NCKIPSD (ENSEASG00005010268) #31	CELSR3 (ENSEASG00005010210) #32	SLC26A6 (ENSEASG00005009823) #33	ENSEASG00005036657 #34	UQCRC1 (ENSEASG00005009425) #35	ENSEASG00005009278
Atlantogenata	ANCESTRAL SPECIES	30	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000163656	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000164160
Xenarthra	ANCESTRAL SPECIES		ENSGT00620000087961.a.b.a.a.a.b.f	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00950000182835.c.d #37	ENSGT00390000008296.b.a.b
Sloth	MODERN SPECIES	7359																QRICH1 (ENSCHOG00000005231) #22
Armadillo	MODERN SPECIES	864	BSN (ENSDNOG00000047457)	DAG1 (ENSDNOG00000016917)	NICN1 (ENSDNOG00000018341) #7	AMT (ENSDNOG00000002402) #8	TCTA (ENSDNOG00000002400) #9	RHOA (ENSDNOG00000046934) #10	USP4 (ENSDNOG00000012797) #13	C3orf62 (ENSDNOG00000019586) #14	IHO1 (ENSDNOG00000013880)	C3orf84 (ENSDNOG00000043752) #16	KLHDC8B (ENSDNOG00000032781) #17	ENSDNOG00000044903 #18	ENSDNOG00000000033 #19	ENSDNOG00000031599	QARS1 (ENSDNOG00000014157) #21	QRICH1 (ENSDNOG00000014130) #22	IMPDH2 (ENSDNOG00000014105)	NDUFAF3 (ENSDNOG00000014096) #23	DALRD3 (ENSDNOG00000041605) #24	WDR6 (ENSDNOG00000033276) #25	P4HTM (ENSDNOG00000014050) #26	ARIH2 (ENSDNOG00000032223) #27	SLC25A20 (ENSDNOG00000000976) #28	ENSDNOG00000034621	PRKAR2A (ENSDNOG00000010826) #29	IP6K2 (ENSDNOG00000010809) #30	NCKIPSD (ENSDNOG00000025438) #31	SLC26A6 (ENSDNOG00000032436) #33	ENSDNOG00000048607 #36	TMEM89 (ENSDNOG00000042610) #34	UQCRC1 (ENSDNOG00000009838) #35
Afrotheria	ANCESTRAL SPECIES	29	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000164160
Afrotheria_a	ANCESTRAL SPECIES	30	ENSGT00390000008429	ENSGT00390000001505 #7	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35	ENSGT00940000160568.n #36
Hyrax	MODERN SPECIES	7378																QRICH1 (ENSPCAG00000016982) #22	IMPDH2 (ENSPCAG00000016974)	DALRD3 (ENSPCAG00000016961) #24	WDR6 (ENSPCAG00000016945) #25	P4HTM (ENSPCAG00000016908) #26	ARIH2 (ENSPCAG00000016873) #27	ENSPCAG00000018842
Elephant	MODERN SPECIES	49	DAG1 (ENSLAFG00000011041)	NICN1 (ENSLAFG00000029153) #7	AMT (ENSLAFG00000009731) #8	TCTA (ENSLAFG00000009728) #9	RHOA (ENSLAFG00000009726) #10	GPX1 (ENSLAFG00000009724) #11	USP4 (ENSLAFG00000018507) #13	C3orf62 (ENSLAFG00000018504) #14	IHO1 (ENSLAFG00000018499)	C3orf84 (ENSLAFG00000027656) #16	KLHDC8B (ENSLAFG00000005090) #17	CCDC71 (ENSLAFG00000005096) #18	LAMB2 (ENSLAFG00000012871) #19	USP19 (ENSLAFG00000012851) #20	QARS1 (ENSLAFG00000012841) #21	QRICH1 (ENSLAFG00000012836) #22	IMPDH2 (ENSLAFG00000012829)	NDUFAF3 (ENSLAFG00000031083) #23	DALRD3 (ENSLAFG00000012826) #24	WDR6 (ENSLAFG00000012822) #25	P4HTM (ENSLAFG00000012817) #26	ARIH2 (ENSLAFG00000012809) #27	SLC25A20 (ENSLAFG00000000862) #28	PRKAR2A (ENSLAFG00000003894) #29	IP6K2 (ENSLAFG00000022060) #30	NCKIPSD (ENSLAFG00000020649) #31	CELSR3 (ENSLAFG00000004808) #32	ENSLAFG00000027768	ENSLAFG00000028729 #33	TMEM89 (ENSLAFG00000028492) #34	UQCRC1 (ENSLAFG00000009586) #35
Tenrec	MODERN SPECIES	16633																QRICH1 (ENSETEG00000014859) #22
Marsupialia	ANCESTRAL SPECIES	14	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b.e.a #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00940000166951	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000158931 #35
Marsupialia_b	ANCESTRAL SPECIES	14	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b.e.a #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00940000166951	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000154359.i.b
Diprotodontia	ANCESTRAL SPECIES	12	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b.e.a #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00940000166951	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000154359.i.a
Wallaby	MODERN SPECIES	8569																QRICH1 (ENSMEUG00000007916) #22	IMPDH2 (ENSMEUG00000007895)	NDUFAF3 (ENSMEUG00000007884) #23
Diprotodontia_a	ANCESTRAL SPECIES	10	ENSGT00940000157524 #8	ENSGT00390000004490 #9	ENSGT00950000182945.b.b.e.a #10	ENSGT00940000156150 #11	ENSGT00940000156645 #13	ENSGT00390000000252 #14	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00940000166951	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00940000156310 #30	ENSGT00390000015725 #31	ENSGT00940000160077 #32	ENSGT01070000253775.a.d.a.b.b #33	ENSGT00390000005336 #34	ENSGT00940000154359.i.a
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1056	DAG1 (ENSVURG00010018158)	NICN1 (ENSVURG00010018161) #7	AMT (ENSVURG00010018166) #8	TCTA (ENSVURG00010018195) #9	ENSVURG00010018206 #10	GPX1 (ENSVURG00010018210) #11	USP4 (ENSVURG00010018217) #13	C3orf62 (ENSVURG00010018240) #14	ENSVURG00010018249	KLHDC8B (ENSVURG00010018258) #17	ENSVURG00010018269	ENSVURG00010018280 #18	ENSVURG00010018298 #19	ENSVURG00010018344	QARS1 (ENSVURG00010018357) #21	QRICH1 (ENSVURG00010018382) #22	IMPDH2 (ENSVURG00010018392)	NDUFAF3 (ENSVURG00010018404) #23	DALRD3 (ENSVURG00010018421) #24	ENSVURG00010018436 #25	ENSVURG00010018443	P4HTM (ENSVURG00010018449) #26	SLC25A20 (ENSVURG00010018452) #28	PRKAR2A (ENSVURG00010018461) #29	IP6K2 (ENSVURG00010018463) #30	NCKIPSD (ENSVURG00010018472) #31	ENSVURG00010018484 #32	SLC26A6 (ENSVURG00010018489) #33	ENSVURG00010018506 #34	ENSVURG00010018510	ENSVURG00010018516
Common wonbat	MODERN SPECIES	657	MIOX (ENSVURG00010005414)	ENSVURG00010005406	ENSVURG00010005401	SBF1 (ENSVURG00010002747)	PPP6R2 (ENSVURG00010002499)	DENND6B (ENSVURG00010002044)	PLXNB2 (ENSVURG00010001916)	MAPK11 (ENSVURG00010001892)	MAPK12 (ENSVURG00010001860)	HDAC10 (ENSVURG00010001834)	TUBGCP6 (ENSVURG00010001278)	SELENOO (ENSVURG00010001210)	ENSVURG00010001194	TRABD (ENSVURG00010001133)	PANX2 (ENSVURG00010001115)	ENSVURG00010001085 #22	MOV10L1 (ENSVURG00010000404)	MLC1 (ENSVURG00010000318)	TTLL8 (ENSVURG00010024420)	ENSVURG00010024408	PIM3 (ENSVURG00010024403)	CRELD2 (ENSVURG00010024398)	ALG12 (ENSVURG00010024393)	ZBED4 (ENSVURG00010024390)	BRD1 (ENSVURG00010024379)	TAFA5 (ENSVURG00010024371)	TBC1D22A (ENSVURG00010024365)	CERK (ENSVURG00010024355)	GRAMD4 (ENSVURG00010024345)	CELSR1 (ENSVURG00010024340)	TRMU (ENSVURG00010024335)
koala	DUPLICATION
koala	MODERN SPECIES	75	NICN1 (ENSPCIG00000011868) #7	AMT (ENSPCIG00000011871) #8	TCTA (ENSPCIG00000033201) #9	ENSPCIG00000011878 #10	GPX1 (ENSPCIG00000011881) #11	USP4 (ENSPCIG00000011972) #13	C3orf62 (ENSPCIG00000018125) #14	ENSPCIG00000018126	ENSPCIG00000018127 #16	KLHDC8B (ENSPCIG00000018128) #17	ENSPCIG00000018130 #19	LAMB2 (ENSPCIG00000018185) #19	USP19 (ENSPCIG00000018723) #20	ENSPCIG00000018725	QARS1 (ENSPCIG00000018726) #21	QRICH1 (ENSPCIG00000018727) #22	ENSPCIG00000018761	NDUFAF3 (ENSPCIG00000022141) #23	DALRD3 (ENSPCIG00000022151) #24	ENSPCIG00000022163 #25	ENSPCIG00000022172	P4HTM (ENSPCIG00000034973) #26	ARIH2 (ENSPCIG00000022175) #27	SLC25A20 (ENSPCIG00000022183) #28	PRKAR2A (ENSPCIG00000022186) #29	IP6K2 (ENSPCIG00000022187) #30	NCKIPSD (ENSPCIG00000022191) #31	ENSPCIG00000022194	ENSPCIG00000037146	ENSPCIG00000022244 #32	ENSPCIG00000034781 #32
koala	MODERN SPECIES	13	NCAPH2 (ENSPCIG00000026435)	LMF2 (ENSPCIG00000026433)	MIOX (ENSPCIG00000026432)	SBF1 (ENSPCIG00000026429)	PPP6R2 (ENSPCIG00000026109)	DENND6B (ENSPCIG00000016129)	PLXNB2 (ENSPCIG00000016132)	MAPK11 (ENSPCIG00000034016)	MAPK12 (ENSPCIG00000035075)	HDAC10 (ENSPCIG00000016148)	TUBGCP6 (ENSPCIG00000016151)	SELENOO (ENSPCIG00000016158)	ENSPCIG00000033724	TRABD (ENSPCIG00000034313)	PANX2 (ENSPCIG00000035129)	ENSPCIG00000011125 #22	MOV10L1 (ENSPCIG00000011128)	MLC1 (ENSPCIG00000011131)	ENSPCIG00000013777	PIM3 (ENSPCIG00000026458)	ENSPCIG00000026457	ALG12 (ENSPCIG00000026455)	ZBED4 (ENSPCIG00000026453)	BRD1 (ENSPCIG00000010892)	ENSPCIG00000020971
Tasmanian devil	DUPLICATION
Tasmanian devil	MODERN SPECIES		AMT (ENSSHAG00000016474) #8	TCTA (ENSSHAG00000020820) #9	ENSSHAG00000016308 #10	GPX1 (ENSSHAG00000031759) #11	USP4 (ENSSHAG00000016024) #13	C3orf62 (ENSSHAG00000029899) #14	ENSSHAG00000015747	ENSSHAG00000024380 #16	KLHDC8B (ENSSHAG00000027422) #17	ENSSHAG00000015577	ENSSHAG00000028406 #18	ENSSHAG00000030662 #19	USP19 (ENSSHAG00000015212) #20	LAMB2 (ENSSHAG00000015322) #19	ENSSHAG00000031850	QRICH1 (ENSSHAG00000023020) #22	QARS1 (ENSSHAG00000015068) #21	IMPDH2 (ENSSHAG00000022188)	NDUFAF3 (ENSSHAG00000014794) #23	DALRD3 (ENSSHAG00000024349) #24	ENSSHAG00000014674 #25	ENSSHAG00000025091	ARIH2 (ENSSHAG00000014344) #27	SLC25A20 (ENSSHAG00000029717) #28	PRKAR2A (ENSSHAG00000023624) #29	IP6K2 (ENSSHAG00000012845) #30	CELSR3 (ENSSHAG00000012387) #32	SLC26A6 (ENSSHAG00000012116) #33	ENSSHAG00000031602 #34	ENSSHAG00000029339	ENSSHAG00000011805
Tasmanian devil	MODERN SPECIES	4	NCAPH2 (ENSSHAG00000000189)	LMF2 (ENSSHAG00000004843)	MIOX (ENSSHAG00000004066)	ENSSHAG00000021406	SBF1 (ENSSHAG00000000303)	PPP6R2 (ENSSHAG00000011257)	DENND6B (ENSSHAG00000010749)	PLXNB2 (ENSSHAG00000010107)	ENSSHAG00000029547	ENSSHAG00000009776	MAPK12 (ENSSHAG00000009604)	ENSSHAG00000031282	TUBGCP6 (ENSSHAG00000009233)	TRABD (ENSSHAG00000008744)	PANX2 (ENSSHAG00000021304)	ENSSHAG00000023510 #22	MOV10L1 (ENSSHAG00000007502)	ENSSHAG00000006196	ENSSHAG00000005521	ENSSHAG00000021243	CRELD2 (ENSSHAG00000021476)	ALG12 (ENSSHAG00000017040)	ZBED4 (ENSSHAG00000029510)	BRD1 (ENSSHAG00000016774)	TAFA5 (ENSSHAG00000021478)	ENSSHAG00000009035	ENSSHAG00000008393	ENSSHAG00000029015	ENSSHAG00000000971	ENSSHAG00000023073	ENSSHAG00000023816
Opossum	DUPLICATION
Opossum	MODERN SPECIES	5	AMT (ENSMODG00000012973) #8	TCTA (ENSMODG00000012978) #9	RHOA (ENSMODG00000042763) #10	GPX1 (ENSMODG00000012984) #11	USP4 (ENSMODG00000013001) #13	C3orf62 (ENSMODG00000013005) #14	ENSMODG00000043050	ENSMODG00000013014 #16	KLHDC8B (ENSMODG00000013022) #17	ENSMODG00000013027	ENSMODG00000039230 #19	LAMB2 (ENSMODG00000013288) #19	USP19 (ENSMODG00000013305) #20	ENSMODG00000013310	QARS1 (ENSMODG00000013321) #21	QRICH1 (ENSMODG00000013333) #22	IMPDH2 (ENSMODG00000013354)	NDUFAF3 (ENSMODG00000022966) #23	DALRD3 (ENSMODG00000013362) #24	ENSMODG00000013296 #25	ENSMODG00000043990	P4HTM (ENSMODG00000013366) #26	ARIH2 (ENSMODG00000013374) #27	ENSMODG00000013383 #28	PRKAR2A (ENSMODG00000013392) #29	IP6K2 (ENSMODG00000013401) #30	NCKIPSD (ENSMODG00000013410) #31	CELSR3 (ENSMODG00000013462) #32	SLC26A6 (ENSMODG00000043076) #33	ENSMODG00000029337 #34	ENSMODG00000048546
Opossum	MODERN SPECIES	7	ENSMODG00000005805	ENSMODG00000005766	ENSMODG00000039811	DENND6B (ENSMODG00000005741)	ENSMODG00000044283	ENSMODG00000051296	ENSMODG00000005681	MAPK12 (ENSMODG00000005636)	ENSMODG00000005559	TUBGCP6 (ENSMODG00000005532)	SELENOO (ENSMODG00000005512)	ENSMODG00000005485	TRABD (ENSMODG00000005497)	ENSMODG00000025383	PANX2 (ENSMODG00000005488)	ENSMODG00000005479 #22	MOV10L1 (ENSMODG00000005419)	MLC1 (ENSMODG00000005396)	ENSMODG00000005379	ENSMODG00000005362	EHD1 (ENSMODG00000010205)	ARL2 (ENSMODG00000010200)	SNX15 (ENSMODG00000024076)	SAC3D1 (ENSMODG00000044037)	ENSMODG00000038965	ENSMODG00000046054	ZFPL1 (ENSMODG00000010134)	TMEM262 (ENSMODG00000038045)	VPS51 (ENSMODG00000010119)	TM7SF2 (ENSMODG00000010108)	ZNHIT2 (ENSMODG00000024077)
Platypus	MODERN SPECIES	84	JAGN1 (ENSOANG00000041559)	IL17RE (ENSOANG00000004459)	IL17RC (ENSOANG00000010509)	CRELD1 (ENSOANG00000004057)	ENSOANG00000042375	ENSOANG00000042177	KLHDC8B (ENSOANG00000013712) #17	ENSOANG00000012254	ENSOANG00000008128 #18	ENSOANG00000046400 #19	LAMB2 (ENSOANG00000004144) #19	USP19 (ENSOANG00000002437) #20	ENSOANG00000036939	ENSOANG00000015022	QARS1 (ENSOANG00000014118) #21	QRICH1 (ENSOANG00000010904) #22	IMPDH2 (ENSOANG00000010907)	NDUFAF3 (ENSOANG00000010908) #23	DALRD3 (ENSOANG00000010909) #24	ENSOANG00000010910 #25	P4HTM (ENSOANG00000048877) #26	ARIH2 (ENSOANG00000041696) #27	SLC25A20 (ENSOANG00000007566) #28	PRKAR2A (ENSOANG00000020926) #29	IP6K2 (ENSOANG00000001845) #30	NCKIPSD (ENSOANG00000001846) #31	CELSR3 (ENSOANG00000001847) #32	SLC26A6 (ENSOANG00000001849) #33	UQCRC1 (ENSOANG00000001852) #35	COPG1 (ENSOANG00000001854)	HMCES (ENSOANG00000001855)
Sauria	ANCESTRAL SPECIES	13	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869
Lepidosauria	ANCESTRAL SPECIES	14	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869	ENSGT00940000160985
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000047225.e.a.b	ENSGT00510000047225.e.a.a	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000047225.e.a.b.c	ENSGT00510000047225.e.a.a	ENSGT00510000048121	ENSGT00530000065109	ENSGT01030000237505	ENSGT00390000017669
Common wall lizard	MODERN SPECIES	10	IL17RC (ENSPMRG00000019740)	CRELD1 (ENSPMRG00000019728)	C3orf84 (ENSPMRG00000019699) #16	KLHDC8B (ENSPMRG00000019681) #17	ENSPMRG00000019673	CCDC71 (ENSPMRG00000019666) #18	ENSPMRG00000019663	ENSPMRG00000017713 #19	LAMB2 (ENSPMRG00000015114) #19	USP19 (ENSPMRG00000014705) #20	ENSPMRG00000014196	ENSPMRG00000014107	ENSPMRG00000014095	ENSPMRG00000014089	QARS1 (ENSPMRG00000013878) #21	QRICH1 (ENSPMRG00000013823) #22	IMPDH2 (ENSPMRG00000013803)	NDUFAF3 (ENSPMRG00000013795) #23	DALRD3 (ENSPMRG00000013785) #24	WDR6 (ENSPMRG00000013779) #25	ENSPMRG00000013772	P4HTM (ENSPMRG00000013765) #26	ARIH2 (ENSPMRG00000013741) #27	SLC25A20 (ENSPMRG00000013723) #28	ENSPMRG00000013713	PRKAR2A (ENSPMRG00000013697) #29	ENSPMRG00000013692	ENSPMRG00000013689	ENSPMRG00000013672	ENSPMRG00000013662	HTD2 (ENSPMRG00000013658)
Argentine black and white tegu	MODERN SPECIES	30						ENSSMRG00000017255 #19	ENSSMRG00000017256	LAMB2 (ENSSMRG00000017257) #19	USP19 (ENSSMRG00000017261) #20	ENSSMRG00000017272	ENSSMRG00000017274	ENSSMRG00000017275	ENSSMRG00000017287	ZPR1 (ENSSMRG00000017290)	QARS1 (ENSSMRG00000017292) #21	QRICH1 (ENSSMRG00000017295) #22	IMPDH2 (ENSSMRG00000017298)	NDUFAF3 (ENSSMRG00000017299) #23	DALRD3 (ENSSMRG00000017304) #24	WDR6 (ENSSMRG00000017305) #25	P4HTM (ENSSMRG00000017306) #26	ENSSMRG00000017307	ARIH2 (ENSSMRG00000017308) #27	SLC25A20 (ENSSMRG00000017311) #28	PRKAR2A (ENSSMRG00000017313) #29	ENSSMRG00000017314	ENSSMRG00000017319	ENSSMRG00000017320	RPP14 (ENSSMRG00000017321)	HTD2 (ENSSMRG00000017322)	ENSSMRG00000017324
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000047225.e.a.b	ENSGT00510000047225.e.a.a	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00980000198877 #15	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621.g.b #24	ENSGT00390000014621.g.a #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000047225.e.a.b.a	ENSGT00510000047225.e.a.b.b	ENSGT00940000154715.b.k.b.a.a.a.b.a.b.a.a.a.a.b.a.a.a.a.a.a.b.d.a	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669
Elapidae_a	ANCESTRAL SPECIES	69	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00980000198877 #15	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621.g.b #24	ENSGT00390000014621.g.a #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000047225.e.a.b.a	ENSGT00510000047225.e.a.b.b
Acanthophiinae	ANCESTRAL SPECIES	67	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00980000198877 #15	ENSGT00390000002177 #16	ENSGT00940000160815 #17	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621.g.b #24	ENSGT00390000014621.g.a #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000047225.e.a.b.a	ENSGT00510000047225.e.a.b.b
Eastern brown snake	MODERN SPECIES	100	RPUSD3 (ENSPTXG00000012852)	JAGN1 (ENSPTXG00000012853)	IL17RE (ENSPTXG00000012854)	ENSPTXG00000012855	C3orf84 (ENSPTXG00000012856) #16	KLHDC8B (ENSPTXG00000012857) #17	CCDC71 (ENSPTXG00000012858) #18	ENSPTXG00000012859 #19	LAMB2 (ENSPTXG00000012864) #19	USP19 (ENSPTXG00000009840) #20	ENSPTXG00000010167	ENSPTXG00000010168	ENSPTXG00000010169	ENSPTXG00000010170	QARS1 (ENSPTXG00000010171) #21	QRICH1 (ENSPTXG00000010172) #22	IMPDH2 (ENSPTXG00000010173)	NDUFAF3 (ENSPTXG00000010175) #23	DALRD3 (ENSPTXG00000010179) #24	ENSPTXG00000010184 #25	ENSPTXG00000010186 #25	P4HTM (ENSPTXG00000010190) #26	ARIH2 (ENSPTXG00000010213) #27	SLC25A20 (ENSPTXG00000010215) #28	PRKAR2A (ENSPTXG00000010216) #29	ENSPTXG00000010219	ENSPTXG00000010308
Mainland tiger snake	MODERN SPECIES	180	JAGN1 (ENSNSUG00000004497)	ENSNSUG00000004507	CRELD1 (ENSNSUG00000004509)	ENSNSUG00000004512 #15	C3orf84 (ENSNSUG00000004516) #16	KLHDC8B (ENSNSUG00000004528) #17	CCDC71 (ENSNSUG00000004533) #18	ENSNSUG00000004534	LAMB2 (ENSNSUG00000004564) #19	USP19 (ENSNSUG00000005212) #20	ENSNSUG00000005768	ENSNSUG00000005769	ENSNSUG00000005770	ENSNSUG00000005771	QARS1 (ENSNSUG00000005772) #21	QRICH1 (ENSNSUG00000006247) #22	IMPDH2 (ENSNSUG00000006248)	NDUFAF3 (ENSNSUG00000006250) #23	ENSNSUG00000006253 #24	ENSNSUG00000006254 #24	WDR6 (ENSNSUG00000006255) #25	P4HTM (ENSNSUG00000006258) #26	ARIH2 (ENSNSUG00000006307) #27	SLC25A20 (ENSNSUG00000006388) #28	PRKAR2A (ENSNSUG00000006416) #29	ENSNSUG00000006420	ENSNSUG00000006422
Blue-lipped sea krait	MODERN SPECIES	815																QRICH1 (ENSLLTG00000012601) #22	ENSLLTG00000012593	IMPDH2 (ENSLLTG00000012573)	NDUFAF3 (ENSLLTG00000012561) #23
Indian cobra	MODERN SPECIES	1	JAGN1 (ENSNNAG00000001308)	ENSNNAG00000001313	ENSNNAG00000001329	CRELD1 (ENSNNAG00000001343)	ENSNNAG00000001369	C3orf84 (ENSNNAG00000001403) #16	KLHDC8B (ENSNNAG00000001437) #17	ENSNNAG00000001457 #19	LAMB2 (ENSNNAG00000001533) #19	USP19 (ENSNNAG00000001936) #20	ENSNNAG00000002819	ENSNNAG00000002829	ENSNNAG00000002833	ENSNNAG00000002836	ENSNNAG00000002846 #21	QRICH1 (ENSNNAG00000002859) #22	IMPDH2 (ENSNNAG00000002870)	NDUFAF3 (ENSNNAG00000002892) #23	ENSNNAG00000002905 #24	ENSNNAG00000002914 #24	ENSNNAG00000002924 #25	P4HTM (ENSNNAG00000002941) #26	ARIH2 (ENSNNAG00000002958) #27	SLC25A20 (ENSNNAG00000002971) #28	PRKAR2A (ENSNNAG00000002978) #29	ENSNNAG00000002998	ENSNNAG00000003041	ENSNNAG00000003060	ENSNNAG00000003065	ENSNNAG00000003080	ENSNNAG00000003095
Lizard	MODERN SPECIES	1	CCDC71 (ENSACAG00000027709) #18	ENSACAG00000014991 #19	LAMB2 (ENSACAG00000013350) #19	ENSACAG00000045278	USP19 (ENSACAG00000013261) #20	ENSACAG00000040455	ENSACAG00000013014	ENSACAG00000040596	ENSACAG00000013002	ENSACAG00000042722	ENSACAG00000012958	ENSACAG00000022588	ENSACAG00000037077	ENSACAG00000041783	QARS1 (ENSACAG00000012645) #21	QRICH1 (ENSACAG00000012576) #22	IMPDH2 (ENSACAG00000012452)	NDUFAF3 (ENSACAG00000012425) #23	ENSACAG00000012386 #24	WDR6 (ENSACAG00000012328) #25	ENSACAG00000039184	ENSACAG00000012320	P4HTM (ENSACAG00000012274) #26	ARIH2 (ENSACAG00000012184) #27	SLC25A20 (ENSACAG00000012132) #28	ENSACAG00000040847	ENSACAG00000039591	PRKAR2A (ENSACAG00000012010) #29	ENSACAG00000041483	ENSACAG00000029351	ENSACAG00000011937
tuatara	DUPLICATION
tuatara	MODERN SPECIES	452											ENSSPUG00000010336 #20	ENSSPUG00000010303	ENSSPUG00000010235	QARS1 (ENSSPUG00000010197) #21	ENSSPUG00000010193 #22	QRICH1 (ENSSPUG00000010188) #22
tuatara	MODERN SPECIES	452												ENSSPUG00000010336 #20	ENSSPUG00000010303	ENSSPUG00000010235	QARS1 (ENSSPUG00000010197) #21	ENSSPUG00000010193 #22	QRICH1 (ENSSPUG00000010188) #22
Archelosauria	ANCESTRAL SPECIES	17	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869
Archosauria	ANCESTRAL SPECIES	24	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869
Aves	ANCESTRAL SPECIES	29	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869
Neognathae	ANCESTRAL SPECIES	27	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869
Neognathae_b	ANCESTRAL SPECIES	18	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869
Passeriformes	ANCESTRAL SPECIES	16	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869
Great tit	MODERN SPECIES	3	RPUSD3 (ENSPMJG00000004855)	JAGN1 (ENSPMJG00000004856)	IL17RE (ENSPMJG00000004860)	IL17RC (ENSPMJG00000004865)	CRELD1 (ENSPMJG00000004868)	PRRT3 (ENSPMJG00000004869)	IHO1 (ENSPMJG00000004872)	KLHDC8B (ENSPMJG00000004874) #17	ENSPMJG00000004875	CCDC71 (ENSPMJG00000004876) #18	ENSPMJG00000004878 #19	LAMB2 (ENSPMJG00000004892) #19	USP19 (ENSPMJG00000004902) #20	ENSPMJG00000004905	QARS1 (ENSPMJG00000004906) #21	QRICH1 (ENSPMJG00000004915) #22	IMPDH2 (ENSPMJG00000004917)	ENSPMJG00000004920	NDUFAF3 (ENSPMJG00000004921) #23	DALRD3 (ENSPMJG00000004925) #24	ENSPMJG00000004927 #25	P4HTM (ENSPMJG00000004932) #26	ENSPMJG00000004934	ARIH2 (ENSPMJG00000004935) #27	SLC25A20 (ENSPMJG00000004945) #28	PRKAR2A (ENSPMJG00000004949) #29	HTD2 (ENSPMJG00000004951)	RPP14 (ENSPMJG00000004952)	PXK (ENSPMJG00000004956)	PDHB (ENSPMJG00000004971)	KCTD6 (ENSPMJG00000004981)
Passeriformes_d	ANCESTRAL SPECIES	16	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869
Passeriformes_g	ANCESTRAL SPECIES	16	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00950000185305	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869	ENSGT00940000160985
Passeroidea	ANCESTRAL SPECIES	16	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00910000146976	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00940000164203	ENSGT00390000014570 #26	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869
Zebra finch	MODERN SPECIES	3	RPUSD3 (ENSTGUG00000008744)	JAGN1 (ENSTGUG00000008751)	IL17RE (ENSTGUG00000024502)	IL17RC (ENSTGUG00000008756)	CRELD1 (ENSTGUG00000008758)	PRRT3 (ENSTGUG00000026207)	IHO1 (ENSTGUG00000020796)	KLHDC8B (ENSTGUG00000008764) #17	ENSTGUG00000025627	CCDC71 (ENSTGUG00000008773) #18	LAMB2 (ENSTGUG00000008776) #19	USP19 (ENSTGUG00000008834) #20	ENSTGUG00000008855	ENSTGUG00000021227	QARS1 (ENSTGUG00000008887) #21	QRICH1 (ENSTGUG00000008954) #22	IMPDH2 (ENSTGUG00000008980)	DALRD3 (ENSTGUG00000009024) #24	NDUFAF3 (ENSTGUG00000009019) #23	WDR6 (ENSTGUG00000009040) #25	ENSTGUG00000009077	P4HTM (ENSTGUG00000009060) #26	ARIH2 (ENSTGUG00000009080) #27	SLC25A20 (ENSTGUG00000009104) #28	PRKAR2A (ENSTGUG00000009123) #29	ENSTGUG00000009157	PXK (ENSTGUG00000009162)	PDHB (ENSTGUG00000009179)	KCTD6 (ENSTGUG00000009191)	ACOX2 (ENSTGUG00000009192)	FAM107A (ENSTGUG00000027669)
Common canary	MODERN SPECIES	15	ENSSCAG00000005480	JAGN1 (ENSSCAG00000005482)	ENSSCAG00000005485	ENSSCAG00000005492	CRELD1 (ENSSCAG00000005499)	KLHDC8B (ENSSCAG00000005507) #17	ENSSCAG00000005516	CCDC71 (ENSSCAG00000005519) #18	LAMB2 (ENSSCAG00000005543) #19	ENSSCAG00000005702	USP19 (ENSSCAG00000005708) #20	ENSSCAG00000005722	ENSSCAG00000005728	ENSSCAG00000005732 #21	QARS1 (ENSSCAG00000005740) #21	QRICH1 (ENSSCAG00000005766) #22	IMPDH2 (ENSSCAG00000005775)	ENSSCAG00000005785	NDUFAF3 (ENSSCAG00000005786) #23	DALRD3 (ENSSCAG00000005791) #24	P4HTM (ENSSCAG00000005804) #26	ENSSCAG00000005857 #25	ENSSCAG00000005861	ARIH2 (ENSSCAG00000005865) #27	SLC25A20 (ENSSCAG00000005883) #28	PRKAR2A (ENSSCAG00000005901) #29	HTD2 (ENSSCAG00000005909)	ENSSCAG00000005914	PXK (ENSSCAG00000005953)	PDHB (ENSSCAG00000006180)	KCTD6 (ENSSCAG00000006187)
Medium ground finch	MODERN SPECIES	20	CAMK1 (ENSGFOG00000006965)	TADA3 (ENSGFOG00000006954)	ARPC4 (ENSGFOG00000006945)	ENSGFOG00000006935	JAGN1 (ENSGFOG00000006928)	RPUSD3 (ENSGFOG00000006920)	CRELD1 (ENSGFOG00000006912)	KLHDC8B (ENSGFOG00000006902) #17	CCDC71 (ENSGFOG00000006897) #18	LAMB2 (ENSGFOG00000006844) #19	ENSGFOG00000006836	USP19 (ENSGFOG00000006826) #20	ENSGFOG00000006795	ENSGFOG00000006779	QARS1 (ENSGFOG00000006763) #21	QRICH1 (ENSGFOG00000006755) #22	ENSGFOG00000006750	IMPDH2 (ENSGFOG00000006492)	DALRD3 (ENSGFOG00000006460) #24	ENSGFOG00000006457 #25	P4HTM (ENSGFOG00000006438) #26	ENSGFOG00000006429	ARIH2 (ENSGFOG00000006421) #27	SLC25A20 (ENSGFOG00000006408) #28	PRKAR2A (ENSGFOG00000006375) #29	ENSGFOG00000006354	HTD2 (ENSGFOG00000006345)	PXK (ENSGFOG00000005061)	PDHB (ENSGFOG00000005020)	KCTD6 (ENSGFOG00000005013)	ACOX2 (ENSGFOG00000004999)
Flycatcher	MODERN SPECIES	3	TTLL3 (ENSFALG00000012960)	RPUSD3 (ENSFALG00000012968)	JAGN1 (ENSFALG00000012972)	ENSFALG00000028141	ENSFALG00000012990	CRELD1 (ENSFALG00000026600)	IHO1 (ENSFALG00000023288)	KLHDC8B (ENSFALG00000013023) #17	ENSFALG00000013026	CCDC71 (ENSFALG00000014492) #18	LAMB2 (ENSFALG00000013029) #19	USP19 (ENSFALG00000013039) #20	ENSFALG00000013056	ENSFALG00000013060	QARS1 (ENSFALG00000013066) #21	QRICH1 (ENSFALG00000013074) #22	IMPDH2 (ENSFALG00000013079)	ENSFALG00000023042 #23	DALRD3 (ENSFALG00000023740) #24	ENSFALG00000023573 #25	P4HTM (ENSFALG00000013097) #26	ENSFALG00000013102	ARIH2 (ENSFALG00000013114) #27	SLC25A20 (ENSFALG00000013123) #28	PRKAR2A (ENSFALG00000023232) #29	RPP14 (ENSFALG00000013148)	HTD2 (ENSFALG00000023112)	PXK (ENSFALG00000013159)	PDHB (ENSFALG00000013169)	KCTD6 (ENSFALG00000029058)	ACOX2 (ENSFALG00000013192)
Neognathae_c	ANCESTRAL SPECIES	21	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00910000146976	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869
Kakapo	MODERN SPECIES	3	JAGN1 (ENSSHBG00005000972)	ENSSHBG00005000970	ENSSHBG00005000969	ENSSHBG00005018060	CRELD1 (ENSSHBG00005018057)	PRRT3 (ENSSHBG00005018053)	ENSSHBG00005018050 #15	KLHDC8B (ENSSHBG00005018042) #17	ENSSHBG00005018034	CCDC71 (ENSSHBG00005018032) #18	LAMB2 (ENSSHBG00005017487) #19	USP19 (ENSSHBG00005016544) #20	ENSSHBG00005016461	ENSSHBG00005016456	QARS1 (ENSSHBG00005016441) #21	QRICH1 (ENSSHBG00005016422) #22	ENSSHBG00005016413	IMPDH2 (ENSSHBG00005016402)	NDUFAF3 (ENSSHBG00005016388) #23	DALRD3 (ENSSHBG00005016365) #24	WDR6 (ENSSHBG00005016352) #25	ENSSHBG00005016345	P4HTM (ENSSHBG00005016338) #26	ARIH2 (ENSSHBG00005016333) #27	SLC25A20 (ENSSHBG00005016329) #28	PRKAR2A (ENSSHBG00005016314) #29	HTD2 (ENSSHBG00005016298)	PXK (ENSSHBG00005016286)	PDHB (ENSSHBG00005016272)	KCTD6 (ENSSHBG00005016263)	ACOX2 (ENSSHBG00005016121)
Golden eagle	MODERN SPECIES	12	JAGN1 (ENSACCG00020010336)	IL17RE (ENSACCG00020010363)	IL17RC (ENSACCG00020010397)	CRELD1 (ENSACCG00020010416)	PRRT3 (ENSACCG00020010432)	ENSACCG00020010449	KLHDC8B (ENSACCG00020010458) #17	ENSACCG00020010479	CCDC71 (ENSACCG00020010491) #18	LAMB2 (ENSACCG00020010517) #19	ENSACCG00020010613 #19	USP19 (ENSACCG00020011256) #20	ENSACCG00020011898	ENSACCG00020011936	QARS1 (ENSACCG00020011978) #21	QRICH1 (ENSACCG00020012022) #22	IMPDH2 (ENSACCG00020012264)	NDUFAF3 (ENSACCG00020012422) #23	DALRD3 (ENSACCG00020012461) #24	ENSACCG00020012507 #25	P4HTM (ENSACCG00020012539) #26	ENSACCG00020012568	ARIH2 (ENSACCG00020012611) #27	SLC25A20 (ENSACCG00020012666) #28	PRKAR2A (ENSACCG00020012703) #29	RPP14 (ENSACCG00020012728)	HTD2 (ENSACCG00020012755)	PXK (ENSACCG00020012820)	PDHB (ENSACCG00020012932)	KCTD6 (ENSACCG00020012941)	ACOX2 (ENSACCG00020012979)
Galloanserae	ANCESTRAL SPECIES	26	ENSGT00390000005596	ENSGT00940000161421.b	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00950000185305	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869	ENSGT00940000160985
Anatidae	ANCESTRAL SPECIES	41			ENSGT00940000161421.b	ENSGT00730000111286	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00950000185305	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869	ENSGT00940000160985
Pink-footed goose	MODERN SPECIES	91						IL17RE (ENSABRG00000017585)	IL17RC (ENSABRG00000017595)	PRRT3 (ENSABRG00000017604)	IHO1 (ENSABRG00000017607)	KLHDC8B (ENSABRG00000017609) #17	CCDC71 (ENSABRG00000017612) #18	LAMB2 (ENSABRG00000017620) #19	USP19 (ENSABRG00000017644) #20	ENSABRG00000017664	ENSABRG00000017670	QRICH1 (ENSABRG00000017813) #22	IMPDH2 (ENSABRG00000017852)	NDUFAF3 (ENSABRG00000018501) #23	DALRD3 (ENSABRG00000018505) #24	WDR6 (ENSABRG00000018507) #25	P4HTM (ENSABRG00000018510) #26	ENSABRG00000018535	ARIH2 (ENSABRG00000018552) #27	SLC25A20 (ENSABRG00000018818) #28	PRKAR2A (ENSABRG00000018891) #29	RPP14 (ENSABRG00000018912)	HTD2 (ENSABRG00000018916)	PXK (ENSABRG00000019000)	ENSABRG00000019305	KCTD6 (ENSABRG00000019307)	ACOX2 (ENSABRG00000019321)
Duck	MODERN SPECIES	4	PLXNB1 (ENSAPLG00000008562)	ENSAPLG00000022004	SETD5 (ENSAPLG00000007096)	LHFPL4 (ENSAPLG00000019972)	ENSAPLG00000028999	MTMR14 (ENSAPLG00000006428)	IHO1 (ENSAPLG00000016107)	KLHDC8B (ENSAPLG00000019922) #17	ENSAPLG00000030196	ENSAPLG00000029637 #18	LAMB2 (ENSAPLG00000008249) #19	USP19 (ENSAPLG00000007654) #20	ENSAPLG00000030026	ENSAPLG00000030295	QARS1 (ENSAPLG00000007248) #21	QRICH1 (ENSAPLG00000007130) #22	IMPDH2 (ENSAPLG00000006986)	NDUFAF3 (ENSAPLG00000024636) #23	DALRD3 (ENSAPLG00000006918) #24	WDR6 (ENSAPLG00000025697) #25	ENSAPLG00000006785	P4HTM (ENSAPLG00000006841) #26	ARIH2 (ENSAPLG00000006502) #27	SLC25A20 (ENSAPLG00000029472) #28	PRKAR2A (ENSAPLG00000006277) #29	RPP14 (ENSAPLG00000006272)	HTD2 (ENSAPLG00000006269)	PXK (ENSAPLG00000005874)	ENSAPLG00000028332	KCTD6 (ENSAPLG00000005871)	ACOX2 (ENSAPLG00000005757)
Phasianidae	ANCESTRAL SPECIES	16	ENSGT00940000161059	ENSGT00390000005596.i	ENSGT00940000161421.b	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869	ENSGT00940000160985
Japanese quail	MODERN SPECIES	3	TADA3 (ENSCJPG00005016577)	ARPC4 (ENSCJPG00005016578)	ENSCJPG00005016579	ENSCJPG00005016580	JAGN1 (ENSCJPG00005016581)	ENSCJPG00005016582	ENSCJPG00005016583	CRELD1 (ENSCJPG00005016584)	ENSCJPG00005016588	KLHDC8B (ENSCJPG00005016589) #17	CCDC71 (ENSCJPG00005016590) #18	USP19 (ENSCJPG00005016606) #20	ENSCJPG00005016607	ENSCJPG00005016611	QARS1 (ENSCJPG00005016612) #21	QRICH1 (ENSCJPG00005016613) #22	IMPDH2 (ENSCJPG00005016642)	NDUFAF3 (ENSCJPG00005016740) #23	DALRD3 (ENSCJPG00005016741) #24	WDR6 (ENSCJPG00005016742) #25	P4HTM (ENSCJPG00005016743) #26	ENSCJPG00005016744	ARIH2 (ENSCJPG00005016745) #27	SLC25A20 (ENSCJPG00005016799) #28	PRKAR2A (ENSCJPG00005016800) #29	RPP14 (ENSCJPG00005016801)	HTD2 (ENSCJPG00005016802)	PXK (ENSCJPG00005016803)	PDHB (ENSCJPG00005016804)	KCTD6 (ENSCJPG00005016805)	ACOX2 (ENSCJPG00005016806)
Phasianidae_b	ANCESTRAL SPECIES	16	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596.i	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869	ENSGT00940000160985
Chicken	MODERN SPECIES	3	IL17RC (ENSGALG00010019246)	CRELD1 (ENSGALG00010019310)	PRRT3 (ENSGALG00010019315)	CCDC36 (ENSGALG00010021775)	KLHDC8B (ENSGALG00010021792) #17	ENSGALG00010021799	CCDC71 (ENSGALG00010021785) #18	ENSGALG00010022674 #19	LAMB2 (ENSGALG00010021762) #19	ENSGALG00010019255 #19	USP19 (ENSGALG00010022242) #20	SLC6A8 (ENSGALG00010020607)	SLC6A8 (ENSGALG00010019231)	ENSGALG00010022258	QARS (ENSGALG00010020619) #21	QRICH1 (ENSGALG00010020630) #22	IMPDH2 (ENSGALG00010020638)	NDUFAF3 (ENSGALG00010020653) #23	DALRD3 (ENSGALG00010020657) #24	ENSGALG00010020670 #25	P4HTM (ENSGALG00010020684) #26	ENSGALG00010020695	ARIH2 (ENSGALG00010020732) #27	SLC25A20 (ENSGALG00010020754) #28	PRKAR2A (ENSGALG00010020764) #29	HTD2 (ENSGALG00010020806)	PXK (ENSGALG00010020880)	PDHB (ENSGALG00010020900)	KCTD6 (ENSGALG00010020905)	ACOX2 (ENSGALG00010020920)	FAM107A (ENSGALG00010020943)
Turkey	MODERN SPECIES	5	CPNE9 (ENSMGAG00000008248)	BRPF1 (ENSMGAG00000008276)	OGG1 (ENSMGAG00000008346)	CAMK1 (ENSMGAG00000008359)	TADA3 (ENSMGAG00000008391)	TTLL3 (ENSMGAG00000008412)	JAGN1 (ENSMGAG00000016819)	CRELD1 (ENSMGAG00000008449)	ENSMGAG00000008459	ENSMGAG00000008466	LAMB2 (ENSMGAG00000008010) #19	USP19 (ENSMGAG00000008096) #20	ENSMGAG00000008103	ENSMGAG00000019310	QARS1 (ENSMGAG00000008134) #21	QRICH1 (ENSMGAG00000008194) #22	IMPDH2 (ENSMGAG00000008504)	NDUFAF3 (ENSMGAG00000019024) #23	DALRD3 (ENSMGAG00000008545) #24	ENSMGAG00000008550 #25	P4HTM (ENSMGAG00000008559) #26	ENSMGAG00000008569	ARIH2 (ENSMGAG00000008587) #27	SLC25A20 (ENSMGAG00000008643) #28	PRKAR2A (ENSMGAG00000008680) #29	RPP14 (ENSMGAG00000015512)	PXK (ENSMGAG00000008724)	PDHB (ENSMGAG00000008428)	KCTD6 (ENSMGAG00000008746)	ACOX2 (ENSMGAG00000008748)	FAM107A (ENSMGAG00000008795)
African ostrich	MODERN SPECIES	640														USP19 (ENSSCUG00000008705) #20	QARS1 (ENSSCUG00000008709) #21	QRICH1 (ENSSCUG00000008713) #22	IMPDH2 (ENSSCUG00000008717)	ENSSCUG00000008724	ENSSCUG00000008725 #24	P4HTM (ENSSCUG00000008727) #26	ENSSCUG00000008736	ARIH2 (ENSSCUG00000008739) #27	SLC25A20 (ENSSCUG00000008742) #28	PRKAR2A (ENSSCUG00000008744) #29	HTD2 (ENSSCUG00000008746)	PXK (ENSSCUG00000008747)	PDHB (ENSSCUG00000008757)	KCTD6 (ENSSCUG00000008759)	ACOX2 (ENSSCUG00000008762)	FAM107A (ENSSCUG00000008764)	CFAP20DC (ENSSCUG00000008775)
Australian saltwater crocodile	MODERN SPECIES	37	CAMK1 (ENSCPRG00005016975)	TADA3 (ENSCPRG00005016965)	ARPC4 (ENSCPRG00005016960)	ENSCPRG00005016957	RPUSD3 (ENSCPRG00005016952)	IL17RE (ENSCPRG00005016941)	ENSCPRG00005016935	ENSCPRG00005016930	KLHDC8B (ENSCPRG00005016923) #17	CCDC71 (ENSCPRG00005016919) #18	ENSCPRG00005016874	ENSCPRG00005016868	USP19 (ENSCPRG00005016837) #20	ENSCPRG00005016826	QARS1 (ENSCPRG00005016819) #21	QRICH1 (ENSCPRG00005016813) #22	IMPDH2 (ENSCPRG00005016744)	ENSCPRG00005016720	NDUFAF3 (ENSCPRG00005016718) #23	DALRD3 (ENSCPRG00005016712) #24	ENSCPRG00005016706 #25	ENSCPRG00005016694	P4HTM (ENSCPRG00005016677) #26	ARIH2 (ENSCPRG00005016670) #27	SLC25A20 (ENSCPRG00005016620) #28	PRKAR2A (ENSCPRG00005016598) #29	HTD2 (ENSCPRG00005016591)	RPP14 (ENSCPRG00005016588)	PXK (ENSCPRG00005016582)	PDHB (ENSCPRG00005016540)	KCTD6 (ENSCPRG00005016528)
Cryptodira	ANCESTRAL SPECIES	17	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060 #19	ENSGT00940000159085 #20	ENSGT00950000185305	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869	ENSGT00940000160985
Chinese turtle	DUPLICATION
Chinese turtle	MODERN SPECIES	1074																QRICH1 (ENSPSIG00000006631) #22	IMPDH2 (ENSPSIG00000005847)
Chinese turtle	MODERN SPECIES	1049	POT1 (ENSPSIG00000013374)	GRM8 (ENSPSIG00000013408)	ZNF800 (ENSPSIG00000013613)	ENSPSIG00000001375	PLXNB2 (ENSPSIG00000013624)	ENSPSIG00000001397	MAPK11 (ENSPSIG00000013808)	MAPK12 (ENSPSIG00000014289)	ENSPSIG00000014909	HDAC10 (ENSPSIG00000014918)	ENSPSIG00000014931	ENSPSIG00000014937	SELENOO (ENSPSIG00000014944)	TRABD (ENSPSIG00000015017)	PANX2 (ENSPSIG00000015136)	ENSPSIG00000015153 #22	MOV10L1 (ENSPSIG00000015161)	MLC1 (ENSPSIG00000015475)	TTLL8 (ENSPSIG00000015596)	IL17REL (ENSPSIG00000016001)	ENSPSIG00000016119
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060.eb #19	ENSGT00940000156060.db.a #19	ENSGT00940000159085 #20	ENSGT00950000185305	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869	ENSGT00940000160985
Testudinidae	ANCESTRAL SPECIES	5											ENSGT00940000156060.db.b #19	ENSGT00940000159085 #20	ENSGT00950000185305	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869	ENSGT00940000160985
Goode s thornscrub tortoise	DUPLICATION
Goode s thornscrub tortoise	MODERN SPECIES	21	JAGN1 (ENSGEVG00005010538)	ENSGEVG00005010509	ENSGEVG00005010477	CRELD1 (ENSGEVG00005010448)	PRRT3 (ENSGEVG00005010395)	KLHDC8B (ENSGEVG00005010358) #17	CCDC71 (ENSGEVG00005010338) #18	ENSGEVG00005009975 #19	ENSGEVG00005009835 #19	ENSGEVG00005009770 #20	ENSGEVG00005009738	ENSGEVG00005009670 #19	ENSGEVG00005009358 #20	ENSGEVG00005009048	QARS1 (ENSGEVG00005008899) #21	QRICH1 (ENSGEVG00005008845) #22	IMPDH2 (ENSGEVG00005008788)	NDUFAF3 (ENSGEVG00005008759) #23	DALRD3 (ENSGEVG00005008702) #24	WDR6 (ENSGEVG00005008674) #25	ENSGEVG00005008651	P4HTM (ENSGEVG00005008597) #26	ARIH2 (ENSGEVG00005008565) #27	SLC25A20 (ENSGEVG00005008545) #28	PRKAR2A (ENSGEVG00005008524) #29	RPP14 (ENSGEVG00005008471)	HTD2 (ENSGEVG00005008441)	PXK (ENSGEVG00005008278)	PDHB (ENSGEVG00005008227)	KCTD6 (ENSGEVG00005008209)	ACOX2 (ENSGEVG00005008113)
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005020492	GPR37 (ENSGEVG00005020494)	POT1 (ENSGEVG00005020498)	GRM8 (ENSGEVG00005020510)	ZNF800 (ENSGEVG00005020517)	PLXNB2 (ENSGEVG00005020523)	MAPK11 (ENSGEVG00005020538)	MAPK12 (ENSGEVG00005020544)	ENSGEVG00005020552	HDAC10 (ENSGEVG00005020563)	TUBGCP6 (ENSGEVG00005020574)	SELENOO (ENSGEVG00005020585)	TRABD (ENSGEVG00005020590)	ENSGEVG00005020597	PANX2 (ENSGEVG00005020606)	ENSGEVG00005020611 #22	MOV10L1 (ENSGEVG00005020619)	MLC1 (ENSGEVG00005020626)	TTLL8 (ENSGEVG00005020632)	ENSGEVG00005020638	PIM3 (ENSGEVG00005020643)	CRELD2 (ENSGEVG00005020645)	ALG12 (ENSGEVG00005020648)	ZBED4 (ENSGEVG00005020651)	BRD1 (ENSGEVG00005020656)	TAFA5 (ENSGEVG00005020666)	TBC1D22A (ENSGEVG00005020669)	CERK (ENSGEVG00005020680)	GRAMD4 (ENSGEVG00005020685)	CELSR1 (ENSGEVG00005000033)	TRMU (ENSGEVG00005000080)
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	821															QARS1 (ENSCABG00000019613) #21	QRICH1 (ENSCABG00000019622) #22	IMPDH2 (ENSCABG00000019654)	NDUFAF3 (ENSCABG00000019713) #23	ENSCABG00000019714 #24	ENSCABG00000019715 #24	WDR6 (ENSCABG00000019716) #25	P4HTM (ENSCABG00000019717) #26	ENSCABG00000019723	ARIH2 (ENSCABG00000019724) #27	SLC25A20 (ENSCABG00000019725) #28	PRKAR2A (ENSCABG00000019726) #29	RPP14 (ENSCABG00000019727)	HTD2 (ENSCABG00000019728)	PXK (ENSCABG00000019729)	PDHB (ENSCABG00000019731)	KCTD6 (ENSCABG00000019733)
Abingdon island giant tortoise	MODERN SPECIES	2703			ZNF800 (ENSCABG00000014099)	ENSCABG00000014088	ENSCABG00000014085	PLXNB2 (ENSCABG00000014080)	MAPK11 (ENSCABG00000014073)	MAPK12 (ENSCABG00000014049)	ENSCABG00000014046	HDAC10 (ENSCABG00000014043)	TUBGCP6 (ENSCABG00000014040)	SELENOO (ENSCABG00000014039)	TRABD (ENSCABG00000014037)	ENSCABG00000014035	PANX2 (ENSCABG00000014032)	ENSCABG00000014028 #22	MOV10L1 (ENSCABG00000014024)	MLC1 (ENSCABG00000014015)	TTLL8 (ENSCABG00000014006)	ENSCABG00000014004
Emydidae	ANCESTRAL SPECIES	13	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418	ENSGT00940000160815 #17	ENSGT00390000003093	ENSGT00940000155306.a #18	ENSGT00940000156060.eb #19	ENSGT00940000156060.db.b #19	ENSGT00940000159085 #20	ENSGT01050000244841.A.b.b.b	ENSGT00420000030545.h	ENSGT00550000074972 #21	ENSGT00940000155241 #22	ENSGT00940000157726	ENSGT00390000018312 #23	ENSGT00390000014621 #24	ENSGT00420000029923 #25	ENSGT00390000014570 #26	ENSGT00940000164203	ENSGT00940000154875 #27	ENSGT00940000157863 #28	ENSGT00940000154836 #29	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869	ENSGT00940000160985
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	847	ENSCPBG00000008818	IL17RC (ENSCPBG00000008800)	ENSCPBG00000008794	CRELD1 (ENSCPBG00000008789)	PRRT3 (ENSCPBG00000008778)	IHO1 (ENSCPBG00000008768)	KLHDC8B (ENSCPBG00000008754) #17	ENSCPBG00000008746	CCDC71 (ENSCPBG00000008741) #18	ENSCPBG00000008727 #19	LAMB2 (ENSCPBG00000008695) #19	USP19 (ENSCPBG00000008674) #20	ENSCPBG00000008654	ENSCPBG00000008650	QARS1 (ENSCPBG00000008614) #21	QRICH1 (ENSCPBG00000008585) #22	IMPDH2 (ENSCPBG00000004204)	NDUFAF3 (ENSCPBG00000004053) #23	DALRD3 (ENSCPBG00000004002) #24	WDR6 (ENSCPBG00000003992) #25	P4HTM (ENSCPBG00000003969) #26	ENSCPBG00000003958	ARIH2 (ENSCPBG00000003938) #27	SLC25A20 (ENSCPBG00000003921) #28	PRKAR2A (ENSCPBG00000003911) #29	HTD2 (ENSCPBG00000003897)	PXK (ENSCPBG00000003869)	PDHB (ENSCPBG00000003822)	KCTD6 (ENSCPBG00000003806)	ACOX2 (ENSCPBG00000003787)	FAM107A (ENSCPBG00000003768)
painted turtle	MODERN SPECIES	7	GPR37 (ENSCPBG00000020768)	POT1 (ENSCPBG00000020770)	ENSCPBG00000020778	ENSCPBG00000020781	ENSCPBG00000020783	ZNF800 (ENSCPBG00000020787)	PLXNB2 (ENSCPBG00000020835)	MAPK11 (ENSCPBG00000021257)	MAPK12 (ENSCPBG00000021260)	HDAC10 (ENSCPBG00000021265)	ENSCPBG00000021271	ENSCPBG00000021273	SELENOO (ENSCPBG00000021276)	TRABD (ENSCPBG00000021278)	PANX2 (ENSCPBG00000021281)	ENSCPBG00000021283 #22	ENSCPBG00000021285	MOV10L1 (ENSCPBG00000021288)	MLC1 (ENSCPBG00000021296)	ENSCPBG00000021301	PIM3 (ENSCPBG00000021320)	CRELD2 (ENSCPBG00000021324)	ALG12 (ENSCPBG00000021329)	ZBED4 (ENSCPBG00000021330)	ENSCPBG00000021331	BRD1 (ENSCPBG00000021334)	TAFA5 (ENSCPBG00000021338)	DOK7 (ENSCPBG00000021343)	LRPAP1 (ENSCPBG00000021346)	MCMDC2 (ENSCPBG00000021353)	SGK3 (ENSCPBG00000021360)
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	33													ENSTMTG00000004195	ENSTMTG00000004207	QARS1 (ENSTMTG00000004258) #21	QRICH1 (ENSTMTG00000004491) #22	IMPDH2 (ENSTMTG00000004616)	ENSTMTG00000005518	NDUFAF3 (ENSTMTG00000005544) #23	WDR6 (ENSTMTG00000005555) #25	P4HTM (ENSTMTG00000005581) #26	ENSTMTG00000005631	ARIH2 (ENSTMTG00000005683) #27	SLC25A20 (ENSTMTG00000005880) #28	PRKAR2A (ENSTMTG00000005904) #29	RPP14 (ENSTMTG00000005929)	HTD2 (ENSTMTG00000005947)	PXK (ENSTMTG00000005961)	PDHB (ENSTMTG00000006005)	KCTD6 (ENSTMTG00000006036)	ACOX2 (ENSTMTG00000006059)
Three-toed box turtle	MODERN SPECIES	28	ENSTMTG00000005471	GPR37 (ENSTMTG00000005457)	POT1 (ENSTMTG00000005284)	GRM8 (ENSTMTG00000005228)	ZNF800 (ENSTMTG00000005214)	PLXNB2 (ENSTMTG00000005123)	MAPK11 (ENSTMTG00000005099)	MAPK12 (ENSTMTG00000005064)	ENSTMTG00000005042	HDAC10 (ENSTMTG00000004962)	TUBGCP6 (ENSTMTG00000004902)	SELENOO (ENSTMTG00000004874)	TRABD (ENSTMTG00000004846)	ENSTMTG00000004682	PANX2 (ENSTMTG00000004651)	ENSTMTG00000004621 #22	MOV10L1 (ENSTMTG00000004565)	MLC1 (ENSTMTG00000004475)	TTLL8 (ENSTMTG00000004450)	IL17REL (ENSTMTG00000004405)	ENSTMTG00000004399	PIM3 (ENSTMTG00000004386)	CRELD2 (ENSTMTG00000004371)	ALG12 (ENSTMTG00000018006)	ZBED4 (ENSTMTG00000018000)	BRD1 (ENSTMTG00000017975)	TAFA5 (ENSTMTG00000017961)	TBC1D22A (ENSTMTG00000017916)	CERK (ENSTMTG00000017889)	GRAMD4 (ENSTMTG00000017550)	CELSR1 (ENSTMTG00000013945)