Vertebrata ANCESTRAL SPECIES ENSGT00940000156326 #22 Gnathostomata ANCESTRAL SPECIES 45 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 Euteleostomi ANCESTRAL SPECIES 9 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00390000009678 ENSGT01050000244882.b.c.a ENSGT00390000016404 ENSGT00940000166994 ENSGT00940000165984 ENSGT00940000157154.d ENSGT00940000162663 ENSGT00390000008983.a ENSGT00940000155071.E ENSGT00940000158384 ENSGT00940000154861 ENSGT00940000157717 Sarcopterygii ANCESTRAL SPECIES 6 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00390000009678 ENSGT01050000244882.b.c.a ENSGT00390000016404 Tetrapoda ANCESTRAL SPECIES 14 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.a ENSGT00940000174128.A Amniota ANCESTRAL SPECIES 22 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 Mammalia ANCESTRAL SPECIES 18 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Theria ANCESTRAL SPECIES 28 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Eutheria ANCESTRAL SPECIES 14 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Glires ANCESTRAL SPECIES 2 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 Rodentia ANCESTRAL SPECIES 2 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Rodentia_B ANCESTRAL SPECIES 26 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Myomorpha ANCESTRAL SPECIES 36 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Muroidea ANCESTRAL SPECIES 37 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Muroidea_A ANCESTRAL SPECIES 4 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00440000035348.l #14 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Murinae ANCESTRAL SPECIES 4 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00440000035348.l #14 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Mus ANCESTRAL SPECIES 12 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00440000035348.l #14 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Mus_A ANCESTRAL SPECIES 7 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00440000035348.l #14 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a.e #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Mus_B ANCESTRAL SPECIES 15 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00440000035348.l #14 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a.e #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Mus_C ANCESTRAL SPECIES 18 ENSGT00860000136051 #7 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00440000035348.l #14 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a.e #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 spretus MODERN SPECIES 15 MGP_SPRETEiJ_G0029694 #7 Magi1 (MGP_SPRETEiJ_G0029695) #8 Slc25a26 (MGP_SPRETEiJ_G0029696) #9 Lrig1 (MGP_SPRETEiJ_G0029697) #10 Kbtbd8 (MGP_SPRETEiJ_G0029698) #11 Suclg2 (MGP_SPRETEiJ_G0029699) #12 Tafa1 (MGP_SPRETEiJ_G0029700) #13 Nup50l (MGP_SPRETEiJ_G0029701) #14 Tafa4 (MGP_SPRETEiJ_G0029702) #15 Eogt (MGP_SPRETEiJ_G0029703) #16 Tmf1 (MGP_SPRETEiJ_G0029704) #17 Uba3 (MGP_SPRETEiJ_G0029705) #18 Arl6ip5 (MGP_SPRETEiJ_G0029706) #19 Lmod3 (MGP_SPRETEiJ_G0029707) #20 Frmd4b (MGP_SPRETEiJ_G0029708) #21 Mitf (MGP_SPRETEiJ_G0029709) #22 Mdfic2 (MGP_SPRETEiJ_G0029710) #23 Foxp1 (MGP_SPRETEiJ_G0029711) #24 MGP_SPRETEiJ_G0029712 #25 Eif4e3 (MGP_SPRETEiJ_G0029713) #26 Gpr27 (MGP_SPRETEiJ_G0029714) #27 Prok2 (MGP_SPRETEiJ_G0029715) #28 Rybp (MGP_SPRETEiJ_G0029716) #29 Shq1 (MGP_SPRETEiJ_G0029717) #30 Gxylt2 (MGP_SPRETEiJ_G0029718) #31 Ppp4r2 (MGP_SPRETEiJ_G0029719) #32 Pdzrn3 (MGP_SPRETEiJ_G0029720) #33 Cntn3 (MGP_SPRETEiJ_G0029721) #34 Chl1 (MGP_SPRETEiJ_G0029722) #35 Cntn6 (MGP_SPRETEiJ_G0029723) #36 Cntn4 (MGP_SPRETEiJ_G0029724) #37 Steppe mouse MODERN SPECIES 3356 ENSMSIG00000030528 Mitf (ENSMSIG00000030546) #22 ENSMSIG00000030568 Mdfic2 (ENSMSIG00000030573) #23 Foxp1 (ENSMSIG00000030580) #24 Eif4e3 (ENSMSIG00000030822) #26 Gpr27 (ENSMSIG00000030826) #27 Prok2 (ENSMSIG00000030827) #28 ENSMSIG00000030829 Rybp (ENSMSIG00000030836) #29 Shq1 (ENSMSIG00000030841) #30 Gxylt2 (ENSMSIG00000030850) #31 Ppp4r2 (ENSMSIG00000030852) #32 Pdzrn3 (ENSMSIG00000030855) #33 Cntn3 (ENSMSIG00000030860) #34 Mouse MODERN SPECIES 15 Adamts9 (ENSMUSG00000030022) Magi1 (ENSMUSG00000045095) #8 Slc25a26 (ENSMUSG00000045100) #9 Lrig1 (ENSMUSG00000030029) #10 Kbtbd8 (ENSMUSG00000030031) #11 Suclg2 (ENSMUSG00000061838) #12 Tafa1 (ENSMUSG00000059187) #13 Nup50l (ENSMUSG00000072878) #14 Tafa4 (ENSMUSG00000046500) #15 Eogt (ENSMUSG00000035245) #16 Tmf1 (ENSMUSG00000030059) #17 Uba3 (ENSMUSG00000030061) #18 Arl6ip5 (ENSMUSG00000035199) #19 Lmod3 (ENSMUSG00000044086) #20 Frmd4b (ENSMUSG00000030064) #21 Mitf (ENSMUSG00000035158) #22 Mdfic2 (ENSMUSG00000090667) #23 Foxp1 (ENSMUSG00000030067) #24 Eif4e3 (ENSMUSG00000093661) #26 Gpr27 (ENSMUSG00000072875) #27 Prok2 (ENSMUSG00000030069) #28 Rybp (ENSMUSG00000072872) #29 Shq1 (ENSMUSG00000035378) #30 Gxylt2 (ENSMUSG00000030074) #31 Ppp4r2 (ENSMUSG00000052144) #32 Pdzrn3 (ENSMUSG00000035357) #33 Cntn3 (ENSMUSG00000030075) #34 Chl1 (ENSMUSG00000030077) #35 Cntn6 (ENSMUSG00000030092) #36 Cntn4 (ENSMUSG00000064293) #37 Il5ra (ENSMUSG00000005364) Ryukyu mouse MODERN SPECIES 15 Adamts9 (MGP_CAROLIEiJ_G0028666) MGP_CAROLIEiJ_G0028667 Magi1 (MGP_CAROLIEiJ_G0028668) #8 Slc25a26 (MGP_CAROLIEiJ_G0028669) #9 Lrig1 (MGP_CAROLIEiJ_G0028670) #10 Kbtbd8 (MGP_CAROLIEiJ_G0028671) #11 Suclg2 (MGP_CAROLIEiJ_G0028672) #12 MGP_CAROLIEiJ_G0028673 #13 Nup50l (MGP_CAROLIEiJ_G0028674) #14 MGP_CAROLIEiJ_G0028675 #15 MGP_CAROLIEiJ_G0028676 #16 MGP_CAROLIEiJ_G0028677 #17 MGP_CAROLIEiJ_G0028678 Arl6ip5 (MGP_CAROLIEiJ_G0028679) #19 MGP_CAROLIEiJ_G0028680 Mitf (MGP_CAROLIEiJ_G0028681) #22 Mdfic2 (MGP_CAROLIEiJ_G0028682) #23 Foxp1 (MGP_CAROLIEiJ_G0028683) #24 MGP_CAROLIEiJ_G0028684 #25 Eif4e3 (MGP_CAROLIEiJ_G0028685) #26 Gpr27 (MGP_CAROLIEiJ_G0028686) #27 Prok2 (MGP_CAROLIEiJ_G0028687) #28 Rybp (MGP_CAROLIEiJ_G0028688) #29 Shq1 (MGP_CAROLIEiJ_G0028689) #30 Gxylt2 (MGP_CAROLIEiJ_G0028690) #31 Ppp4r2 (MGP_CAROLIEiJ_G0028691) #32 Pdzrn3 (MGP_CAROLIEiJ_G0028692) #33 Cntn3 (MGP_CAROLIEiJ_G0028693) #34 Chl1 (MGP_CAROLIEiJ_G0028694) #35 Cntn6 (MGP_CAROLIEiJ_G0028695) #36 Cntn4 (MGP_CAROLIEiJ_G0028696) #37 Shrew mouse MODERN SPECIES 11 MGP_PahariEiJ_G0022417 Magi1 (MGP_PahariEiJ_G0022418) #8 Slc25a26 (MGP_PahariEiJ_G0022419) #9 Lrig1 (MGP_PahariEiJ_G0022420) #10 Kbtbd8 (MGP_PahariEiJ_G0022421) #11 Suclg2 (MGP_PahariEiJ_G0022422) #12 Tafa1 (MGP_PahariEiJ_G0022423) #13 Nup50l (MGP_PahariEiJ_G0022424) #14 Tafa4 (MGP_PahariEiJ_G0022425) #15 Eogt (MGP_PahariEiJ_G0022426) #16 Tmf1 (MGP_PahariEiJ_G0022427) #17 Uba3 (MGP_PahariEiJ_G0022428) #18 Arl6ip5 (MGP_PahariEiJ_G0022429) #19 Lmod3 (MGP_PahariEiJ_G0022430) #20 Frmd4b (MGP_PahariEiJ_G0022431) #21 Mitf (MGP_PahariEiJ_G0022432) #22 Mdfic2 (MGP_PahariEiJ_G0022433) #23 Foxp1 (MGP_PahariEiJ_G0022434) #24 MGP_PahariEiJ_G0022435 #25 Eif4e3 (MGP_PahariEiJ_G0022436) #26 Gpr27 (MGP_PahariEiJ_G0022437) #27 Prok2 (MGP_PahariEiJ_G0022438) #28 Rybp (MGP_PahariEiJ_G0022439) #29 Shq1 (MGP_PahariEiJ_G0022440) #30 Gxylt2 (MGP_PahariEiJ_G0022441) #31 Ppp4r2 (MGP_PahariEiJ_G0022442) #32 Pdzrn3 (MGP_PahariEiJ_G0022443) #33 Cntn3 (MGP_PahariEiJ_G0022444) #34 Chl1 (MGP_PahariEiJ_G0022445) #35 Cntn6 (MGP_PahariEiJ_G0022446) #36 MGP_PahariEiJ_G0022447 #37 Rat MODERN SPECIES 14 Slc25a26 (ENSRNOG00000012831) #9 Lrig1 (ENSRNOG00000012952) #10 LOC687056 (ENSRNOG00000065327) AABR07031972.1 (ENSRNOG00000046899) Kbtbd8 (ENSRNOG00000013390) #11 Suclg2 (ENSRNOG00000005686) #12 LOC108353456 (ENSRNOG00000070575) #13 Nup50-ps1 (ENSRNOG00000024560) #14 Tafa4 (ENSRNOG00000005830) #15 Eogt (ENSRNOG00000024533) #16 Tmf1 (ENSRNOG00000056462) #17 Uba3 (ENSRNOG00000006221) #18 Arl6ip5 (ENSRNOG00000006818) #19 Lmod3 (ENSRNOG00000032443) #20 Frmd4b (ENSRNOG00000007764) #21 Mitf (ENSRNOG00000008658) #22 Mdfic2 (ENSRNOG00000064294) #23 Foxp1 (ENSRNOG00000009184) #24 Eif4e3 (ENSRNOG00000010301) #26 Gpr27 (ENSRNOG00000010880) #27 Ier3ip1-ps1 (ENSRNOG00000030004) Prok2 (ENSRNOG00000010898) #28 LOC120102174 (ENSRNOG00000033673) LOC120102351 (ENSRNOG00000005353) #29 Shq1 (ENSRNOG00000005433) #30 Actg1-ps9 (ENSRNOG00000062691) Gxylt2 (ENSRNOG00000005621) #31 Ppp4r2 (ENSRNOG00000024647) #32 Pdzrn3 (ENSRNOG00000057556) #33 Cntn3 (ENSRNOG00000006144) #34 Chl1 (ENSRNOG00000045771) #35 Cricetidae ANCESTRAL SPECIES 3 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00440000035348.l #14 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Cricetidae_B ANCESTRAL SPECIES 14 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00440000035348.l #14 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Prairie vole MODERN SPECIES 84 Adamts9 (ENSMOCG00000020918) Magi1 (ENSMOCG00000021420) #8 Slc25a26 (ENSMOCG00000012219) #9 Lrig1 (ENSMOCG00000016641) #10 Kbtbd8 (ENSMOCG00000014034) #11 ENSMOCG00000017135 Suclg2 (ENSMOCG00000019822) #12 Tafa1 (ENSMOCG00000005890) #13 Tafa4 (ENSMOCG00000019487) #15 Eogt (ENSMOCG00000010159) #16 Tmf1 (ENSMOCG00000021252) #17 Uba3 (ENSMOCG00000022540) #18 Arl6ip5 (ENSMOCG00000012711) #19 Lmod3 (ENSMOCG00000013878) #20 Frmd4b (ENSMOCG00000016753) #21 Mitf (ENSMOCG00000021092) #22 Mdfic2 (ENSMOCG00000007282) #23 Foxp1 (ENSMOCG00000013376) #24 Eif4e3 (ENSMOCG00000020297) #26 Gpr27 (ENSMOCG00000010723) #27 Prok2 (ENSMOCG00000016202) #28 ENSMOCG00000006102 #29 Shq1 (ENSMOCG00000017836) #30 Gxylt2 (ENSMOCG00000001994) #31 ENSMOCG00000000955 Pdzrn3 (ENSMOCG00000015544) #33 ENSMOCG00000009808 Cntn3 (ENSMOCG00000007453) #34 ENSMOCG00000021562 ENSMOCG00000002512 #35 ENSMOCG00000020899 #35 Northern American deer mouse MODERN SPECIES 16 ENSPEMG00000029600 Slc25a26 (ENSPEMG00000016974) #9 Lrig1 (ENSPEMG00000013717) #10 ENSPEMG00000007390 ENSPEMG00000030152 #11 Suclg2 (ENSPEMG00000017086) #12 Tafa1 (ENSPEMG00000004313) #13 Nup50l (ENSPEMG00000030682) #14 Tafa4 (ENSPEMG00000009755) #15 Eogt (ENSPEMG00000010950) #16 Tmf1 (ENSPEMG00000012807) #17 Uba3 (ENSPEMG00000014697) #18 Arl6ip5 (ENSPEMG00000016527) #19 Lmod3 (ENSPEMG00000016784) #20 Frmd4b (ENSPEMG00000018860) #21 Mitf (ENSPEMG00000002848) #22 Mdfic2 (ENSPEMG00000002945) #23 ENSPEMG00000026818 Foxp1 (ENSPEMG00000010742) #24 Eif4e3 (ENSPEMG00000015380) #26 Gpr27 (ENSPEMG00000030430) #27 ENSPEMG00000026210 Prok2 (ENSPEMG00000030947) #28 ENSPEMG00000028366 ENSPEMG00000017621 #29 Shq1 (ENSPEMG00000000251) #30 Gxylt2 (ENSPEMG00000005596) #31 Pdzrn3 (ENSPEMG00000019769) #33 Cntn3 (ENSPEMG00000014200) #34 Chl1 (ENSPEMG00000023675) #35 Cntn6 (ENSPEMG00000019384) #36 Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Golden Hamster MODERN SPECIES 643 ENSMAUG00000004998 Slc25a26 (ENSMAUG00000021604) #9 Lrig1 (ENSMAUG00000007470) #10 Kbtbd8 (ENSMAUG00000017081) #11 ENSMAUG00000009672 Suclg2 (ENSMAUG00000021321) #12 Tafa1 (ENSMAUG00000019067) #13 Tafa4 (ENSMAUG00000019968) #15 ENSMAUG00000020979 Eogt (ENSMAUG00000017534) #16 Tmf1 (ENSMAUG00000021427) #17 Uba3 (ENSMAUG00000017525) #18 Arl6ip5 (ENSMAUG00000009657) #19 Lmod3 (ENSMAUG00000010204) #20 Frmd4b (ENSMAUG00000007225) #21 Mitf (ENSMAUG00000004545) #22 Mdfic2 (ENSMAUG00000012915) #23 Foxp1 (ENSMAUG00000022171) #24 Eif4e3 (ENSMAUG00000019824) #26 Gpr27 (ENSMAUG00000010831) #27 Prok2 (ENSMAUG00000007849) #28 Rybp (ENSMAUG00000010834) #29 ENSMAUG00000010991 Shq1 (ENSMAUG00000022030) #30 Gxylt2 (ENSMAUG00000021811) #31 Ppp4r2 (ENSMAUG00000010766) #32 Pdzrn3 (ENSMAUG00000007003) #33 Cntn3 (ENSMAUG00000010639) #34 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 144 Slc25a26 (ENSCGRG00001000286) #9 Lrig1 (ENSCGRG00001020436) #10 Kbtbd8 (ENSCGRG00001004948) #11 ENSCGRG00001004433 Suclg2 (ENSCGRG00001011522) #12 Tafa1 (ENSCGRG00001014933) #13 Nup50l (ENSCGRG00001006226) #14 ENSCGRG00001008617 Tafa4 (ENSCGRG00001013503) #15 Eogt (ENSCGRG00001015087) #16 Tmf1 (ENSCGRG00001018858) #17 Uba3 (ENSCGRG00001022490) #18 Arl6ip5 (ENSCGRG00001018813) #19 Lmod3 (ENSCGRG00001010389) #20 Frmd4b (ENSCGRG00001020840) #21 Mitf (ENSCGRG00001011883) #22 Mdfic2 (ENSCGRG00001018361) #23 Foxp1 (ENSCGRG00001015802) #24 Eif4e3 (ENSCGRG00001016500) #26 Gpr27 (ENSCGRG00001001036) #27 Prok2 (ENSCGRG00001020805) #28 ENSCGRG00001005960 Rybp (ENSCGRG00001020152) #29 Shq1 (ENSCGRG00001012583) #30 Gxylt2 (ENSCGRG00001012822) #31 Ppp4r2 (ENSCGRG00001010724) #32 Pdzrn3 (ENSCGRG00001017365) #33 ENSCGRG00001003940 Cntn3 (ENSCGRG00001013551) #34 ENSCGRG00001015607 ENSCGRG00001015306 Chinese hamster chok1gshd MODERN SPECIES 401 Macrod1 (ENSCGRG00001022618) Flrt1 (ENSCGRG00001011678) Otub1 (ENSCGRG00001012395) Cox8a (ENSCGRG00001024928) ENSCGRG00001004057 Rcor2 (ENSCGRG00001008621) Mark2 (ENSCGRG00001010551) Spindoc (ENSCGRG00001001090) Zfta (ENSCGRG00001004358) Rtn3 (ENSCGRG00001018871) Atl3 (ENSCGRG00001018013) Plaat3 (ENSCGRG00001007573) Lgals12 (ENSCGRG00001010564) Plaat5 (ENSCGRG00001019087) Slc22a19 (ENSCGRG00001022436) ENSCGRG00001021584 #22 ENSCGRG00001003608 Slc22a8 (ENSCGRG00001007311) Slc22a6 (ENSCGRG00001015989) Chrm1 (ENSCGRG00001002011) Slc3a2 (ENSCGRG00001025072) Wdr74 (ENSCGRG00001004246) Tex54 (ENSCGRG00001012530) Stx5a (ENSCGRG00001018343) Nxf1 (ENSCGRG00001013721) Tmem223 (ENSCGRG00001023350) Tmem179b (ENSCGRG00001025014) Taf6l (ENSCGRG00001007467) ENSCGRG00001022692 Zbtb3 (ENSCGRG00001006797) Ttc9c (ENSCGRG00001011015) Upper Galilee mountains blind mole rat MODERN SPECIES 545 ENSNGAG00000024077 Magi1 (ENSNGAG00000015704) #8 Slc25a26 (ENSNGAG00000005590) #9 Lrig1 (ENSNGAG00000012917) #10 ENSNGAG00000017225 Kbtbd8 (ENSNGAG00000023811) #11 Suclg2 (ENSNGAG00000014569) #12 Tafa1 (ENSNGAG00000017655) #13 Tafa4 (ENSNGAG00000020616) #15 Eogt (ENSNGAG00000015400) #16 Tmf1 (ENSNGAG00000022497) #17 Uba3 (ENSNGAG00000023328) #18 Arl6ip5 (ENSNGAG00000011599) #19 Lmod3 (ENSNGAG00000012605) #20 Frmd4b (ENSNGAG00000014412) #21 Mitf (ENSNGAG00000014658) #22 Mdfic2 (ENSNGAG00000003023) #23 Lesser Egyptian jerboa MODERN SPECIES 45 F2rl1 (ENSJJAG00000005361) ENSJJAG00000018088 S100z (ENSJJAG00000013195) Crhbp (ENSJJAG00000010630) Prrc1 (ENSJJAG00000011454) Ctxn3 (ENSJJAG00000011014) ENSJJAG00000017426 Slc12a2 (ENSJJAG00000019580) Fbn2 (ENSJJAG00000020592) ENSJJAG00000017710 Slc27a6 (ENSJJAG00000020519) Isoc1 (ENSJJAG00000019157) Adamts19 (ENSJJAG00000021431) Minar2 (ENSJJAG00000000279) Frmd4b (ENSJJAG00000023390) #21 Mitf (ENSJJAG00000018472) #22 Mdfic2 (ENSJJAG00000012963) #23 Foxp1 (ENSJJAG00000022621) #24 Eif4e3 (ENSJJAG00000002638) #26 Gpr27 (ENSJJAG00000011153) #27 Prok2 (ENSJJAG00000021320) #28 Rybp (ENSJJAG00000017045) #29 Shq1 (ENSJJAG00000017611) #30 Gxylt2 (ENSJJAG00000013774) #31 ENSJJAG00000022712 Pdzrn3 (ENSJJAG00000000291) #33 Cntn3 (ENSJJAG00000012448) #34 ENSJJAG00000000622 #19 Chl1 (ENSJJAG00000020689) #35 ENSJJAG00000017679 Cntn6 (ENSJJAG00000013679) #36 Kangaroo rat MODERN SPECIES 331 Prickle2 (ENSDORG00000005850) Adamts9 (ENSDORG00000001254) Magi1 (ENSDORG00000012586) #8 Slc25a26 (ENSDORG00000003507) #9 Lrig1 (ENSDORG00000003508) #10 Kbtbd8 (ENSDORG00000000438) #11 Suclg2 (ENSDORG00000016563) #12 Tafa1 (ENSDORG00000008222) #13 Tafa4 (ENSDORG00000028398) #15 Eogt (ENSDORG00000000514) #16 Tmf1 (ENSDORG00000000515) #17 Uba3 (ENSDORG00000000516) #18 Arl6ip5 (ENSDORG00000029346) #19 Lmod3 (ENSDORG00000000518) #20 Frmd4b (ENSDORG00000002184) #21 Mitf (ENSDORG00000003336) #22 Mdfic2 (ENSDORG00000029192) #23 Foxp1 (ENSDORG00000009604) #24 Eif4e3 (ENSDORG00000006531) #26 Prok2 (ENSDORG00000006150) #28 Rybp (ENSDORG00000015021) #29 ENSDORG00000029850 #30 Gxylt2 (ENSDORG00000010918) #31 ENSDORG00000023761 #32 Pdzrn3 (ENSDORG00000002686) #33 Cntn3 (ENSDORG00000000121) #34 Chl1 (ENSDORG00000010546) #35 Cntn6 (ENSDORG00000005702) #36 Cntn4 (ENSDORG00000014028) #37 Il5ra (ENSDORG00000014033) Trnt1 (ENSDORG00000014035) Rodentia_A ANCESTRAL SPECIES 27 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Sciuridae ANCESTRAL SPECIES 41 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT01020000230354.A.a #21 ENSGT00940000159731 #20 ENSGT00390000008631.a #19 ENSGT00550000074831 #18 ENSGT00390000010697 #17 ENSGT00940000156493 #16 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Marmotini ANCESTRAL SPECIES 49 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT01020000230354.A.a #21 ENSGT00940000159731 #20 ENSGT00390000008631.a #19 ENSGT00550000074831 #18 ENSGT00390000010697 #17 ENSGT00940000156493 #16 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Alpin marmot MODERN SPECIES 40 ENSMMMG00000004766 KBTBD8 (ENSMMMG00000004770) #11 SUCLG2 (ENSMMMG00000004779) #12 TAFA1 (ENSMMMG00000004799) #13 ENSMMMG00000004803 #15 FRMD4B (ENSMMMG00000004812) #21 LMOD3 (ENSMMMG00000004950) #20 ARL6IP5 (ENSMMMG00000004969) #19 UBA3 (ENSMMMG00000004980) #18 TMF1 (ENSMMMG00000005057) #17 EOGT (ENSMMMG00000006008) #16 MITF (ENSMMMG00000006045) #22 MDFIC2 (ENSMMMG00000006133) #23 FOXP1 (ENSMMMG00000006149) #24 ENSMMMG00000006861 #26 PROK2 (ENSMMMG00000006869) #28 RYBP (ENSMMMG00000006873) #29 SHQ1 (ENSMMMG00000006887) #30 GXYLT2 (ENSMMMG00000006933) #31 ENSMMMG00000006977 #32 PDZRN3 (ENSMMMG00000006989) #33 CNTN3 (ENSMMMG00000007027) #34 CHL1 (ENSMMMG00000007097) #35 CNTN6 (ENSMMMG00000007205) #36 CNTN4 (ENSMMMG00000007297) #37 IL5RA (ENSMMMG00000007442) TRNT1 (ENSMMMG00000007463) Marmotini_b ANCESTRAL SPECIES 188 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT01020000230354.A.a #21 ENSGT00940000159731 #20 ENSGT00390000008631.a #19 ENSGT00550000074831 #18 ENSGT00390000010697 #17 ENSGT00940000156493 #16 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 Squirrel MODERN SPECIES 203 KBTBD8 (ENSSTOG00000020443) #11 SUCLG2 (ENSSTOG00000020195) #12 TAFA1 (ENSSTOG00000014757) #13 FRMD4B (ENSSTOG00000028861) #21 LMOD3 (ENSSTOG00000026793) #20 ARL6IP5 (ENSSTOG00000025065) #19 UBA3 (ENSSTOG00000003215) #18 TMF1 (ENSSTOG00000028312) #17 EOGT (ENSSTOG00000003163) #16 MITF (ENSSTOG00000005880) #22 MDFIC2 (ENSSTOG00000021337) #23 FOXP1 (ENSSTOG00000025624) #24 EIF4E3 (ENSSTOG00000020469) #26 PROK2 (ENSSTOG00000000976) #28 RYBP (ENSSTOG00000000185) #29 SHQ1 (ENSSTOG00000010043) #30 GXYLT2 (ENSSTOG00000010059) #31 PPP4R2 (ENSSTOG00000024451) PDZRN3 (ENSSTOG00000020243) #33 CNTN3 (ENSSTOG00000010775) #34 Arctic ground squirrel MODERN SPECIES 106 SUCLG2 (ENSUPAG00010021955) #12 TAFA1 (ENSUPAG00010021952) #13 FRMD4B (ENSUPAG00010021932) #21 LMOD3 (ENSUPAG00010021929) #20 ARL6IP5 (ENSUPAG00010021927) #19 UBA3 (ENSUPAG00010021916) #18 TMF1 (ENSUPAG00010021909) #17 EOGT (ENSUPAG00010021904) #16 MITF (ENSUPAG00010021833) #22 MDFIC2 (ENSUPAG00010021824) #23 FOXP1 (ENSUPAG00010021603) #24 EIF4E3 (ENSUPAG00010021594) #26 GPR27 (ENSUPAG00010021592) #27 PROK2 (ENSUPAG00010021589) #28 RYBP (ENSUPAG00010021587) #29 SHQ1 (ENSUPAG00010021581) #30 GXYLT2 (ENSUPAG00010021574) #31 PPP4R2 (ENSUPAG00010021567) PDZRN3 (ENSUPAG00010021559) #33 CNTN3 (ENSUPAG00010021535) #34 Eurasian red squirrel MODERN SPECIES 10 ENSSVLG00005013626 ENSSVLG00005013547 ENSSVLG00005013464 ENSSVLG00005013369 ENSSVLG00005013309 ENSSVLG00005013244 #11 SUCLG2 (ENSSVLG00005013123) #12 ENSSVLG00005013072 TAFA1 (ENSSVLG00005013002) #13 FRMD4B (ENSSVLG00005012609) #21 LMOD3 (ENSSVLG00005012544) #20 ARL6IP5 (ENSSVLG00005012505) #19 UBA3 (ENSSVLG00005012414) #18 TMF1 (ENSSVLG00005012312) #17 EOGT (ENSSVLG00005012215) #16 MITF (ENSSVLG00005011612) #22 MDFIC2 (ENSSVLG00005011514) #23 FOXP1 (ENSSVLG00005010914) #24 EIF4E3 (ENSSVLG00005010716) #26 GPR27 (ENSSVLG00005010691) #27 PROK2 (ENSSVLG00005010626) #28 RYBP (ENSSVLG00005010589) #29 SHQ1 (ENSSVLG00005010502) #30 GXYLT2 (ENSSVLG00005010448) #31 ENSSVLG00005010375 PDZRN3 (ENSSVLG00005010337) #33 ENSSVLG00005010270 CNTN3 (ENSSVLG00005025887) #34 CHL1 (ENSSVLG00005025877) #35 CNTN6 (ENSSVLG00005025861) #36 CNTN4 (ENSSVLG00005025842) #37 Hystricomorpha ANCESTRAL SPECIES 34 ENSGT00940000156977 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831.i #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Hystricomorpha_a ANCESTRAL SPECIES 45 ENSGT00940000156977 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831.i #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Hystricomorpha_b ANCESTRAL SPECIES 42 ENSGT00940000156977 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831.i #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Long-tailed chinchilla MODERN SPECIES 128 ALDH1L1 (ENSCLAG00000005505) SLC41A3 (ENSCLAG00000004678) SLC25A26 (ENSCLAG00000003949) #9 LRIG1 (ENSCLAG00000003192) #10 KBTBD8 (ENSCLAG00000013659) #11 SUCLG2 (ENSCLAG00000011578) #12 TAFA1 (ENSCLAG00000011025) #13 TAFA4 (ENSCLAG00000011274) #15 EOGT (ENSCLAG00000004823) #16 TMF1 (ENSCLAG00000004298) #17 UBA3 (ENSCLAG00000003651) #18 ARL6IP5 (ENSCLAG00000003471) #19 LMOD3 (ENSCLAG00000006151) #20 FRMD4B (ENSCLAG00000003792) #21 ENSCLAG00000004383 MITF (ENSCLAG00000003365) #22 MDFIC2 (ENSCLAG00000003152) #23 FOXP1 (ENSCLAG00000004963) #24 EIF4E3 (ENSCLAG00000003818) #26 PROK2 (ENSCLAG00000003618) #28 RYBP (ENSCLAG00000006008) #29 SHQ1 (ENSCLAG00000004206) #30 GXYLT2 (ENSCLAG00000003908) #31 PPP4R2 (ENSCLAG00000003231) PDZRN3 (ENSCLAG00000010964) #33 CNTN3 (ENSCLAG00000009614) #34 CHL1 (ENSCLAG00000006459) #35 CNTN6 (ENSCLAG00000008602) #36 CNTN4 (ENSCLAG00000006463) #37 IL5RA (ENSCLAG00000005656) TRNT1 (ENSCLAG00000005186) Degu MODERN SPECIES 71 ENSODEG00000005791 #12 ENSODEG00000006681 TAFA1 (ENSODEG00000006092) #13 ENSODEG00000019577 ENSODEG00000005339 ENSODEG00000019215 TAFA4 (ENSODEG00000005744) #15 EOGT (ENSODEG00000006871) #16 TMF1 (ENSODEG00000007699) #17 ENSODEG00000007097 #18 ARL6IP5 (ENSODEG00000006820) #19 ENSODEG00000007217 LMOD3 (ENSODEG00000005409) #20 FRMD4B (ENSODEG00000005588) #21 ENSODEG00000006902 MITF (ENSODEG00000009287) #22 MDFIC2 (ENSODEG00000006638) #23 FOXP1 (ENSODEG00000007047) #24 EIF4E3 (ENSODEG00000006191) #26 GPR27 (ENSODEG00000006497) #27 PROK2 (ENSODEG00000007144) #28 RYBP (ENSODEG00000008699) #29 SHQ1 (ENSODEG00000009192) #30 GXYLT2 (ENSODEG00000008178) #31 ENSODEG00000019359 ENSODEG00000007497 #32 ENSODEG00000007939 ENSODEG00000006618 ENSODEG00000006984 PDZRN3 (ENSODEG00000008618) #33 CNTN3 (ENSODEG00000006512) #34 Guinea pig MODERN SPECIES 16 KLF15 (ENSCPOG00000005315) ALDH1L1 (ENSCPOG00000006449) SLC41A3 (ENSCPOG00000007303) SLC25A26 (ENSCPOG00000002272) #9 LRIG1 (ENSCPOG00000002275) #10 KBTBD8 (ENSCPOG00000012739) #11 SUCLG2 (ENSCPOG00000013421) #12 TAFA1 (ENSCPOG00000014183) #13 TAFA4 (ENSCPOG00000013292) #15 EOGT (ENSCPOG00000013299) #16 TMF1 (ENSCPOG00000013302) #17 UBA3 (ENSCPOG00000030763) #18 ARL6IP5 (ENSCPOG00000033968) #19 LMOD3 (ENSCPOG00000013314) #20 FRMD4B (ENSCPOG00000037444) #21 MITF (ENSCPOG00000014963) #22 MDFIC2 (ENSCPOG00000036240) #23 FOXP1 (ENSCPOG00000003726) #24 EIF4E3 (ENSCPOG00000000391) #26 PROK2 (ENSCPOG00000033908) #28 RYBP (ENSCPOG00000032177) #29 SHQ1 (ENSCPOG00000011443) #30 GXYLT2 (ENSCPOG00000000442) #31 ENSCPOG00000030150 PPP4R2 (ENSCPOG00000036245) PDZRN3 (ENSCPOG00000030488) #33 CNTN3 (ENSCPOG00000003218) #34 CHL1 (ENSCPOG00000014986) #35 CNTN6 (ENSCPOG00000001124) #36 CNTN4 (ENSCPOG00000026863) #37 Il5ra (ENSCPOG00000007845) Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000041732 ENSHGLG00000002916 #10 ENSHGLG00000011084 KBTBD8 (ENSHGLG00000011553) #11 ENSHGLG00000021116 SUCLG2 (ENSHGLG00000006925) #12 TAFA1 (ENSHGLG00000007920) #13 ENSHGLG00000009657 TAFA4 (ENSHGLG00000047561) #15 EOGT (ENSHGLG00000014748) #16 TMF1 (ENSHGLG00000013960) #17 UBA3 (ENSHGLG00000019309) #18 ARL6IP5 (ENSHGLG00000039284) #19 LMOD3 (ENSHGLG00000019110) #20 FRMD4B (ENSHGLG00000003001) #21 MITF (ENSHGLG00000002575) #22 MDFIC2 (ENSHGLG00000043866) #23 FOXP1 (ENSHGLG00000002984) #24 ENSHGLG00000040329 EIF4E3 (ENSHGLG00000019560) #26 GPR27 (ENSHGLG00000002574) #27 PROK2 (ENSHGLG00000046701) #28 RYBP (ENSHGLG00000040203) #29 SHQ1 (ENSHGLG00000003637) #30 GXYLT2 (ENSHGLG00000002778) #31 PPP4R2 (ENSHGLG00000002829) PDZRN3 (ENSHGLG00000003072) #33 ENSHGLG00000041798 ENSHGLG00000041034 ENSHGLG00000038372 ENSHGLG00000003660 Lagomorpha ANCESTRAL SPECIES 11 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 Rabbit MODERN SPECIES 20 SUCLG2 (ENSOCUG00000012376) #12 ENSOCUG00000034053 TAFA1 (ENSOCUG00000031560) #13 ENSOCUG00000024623 TAFA4 (ENSOCUG00000003703) #15 ENSOCUG00000038099 ENSOCUG00000031619 EOGT (ENSOCUG00000012022) #16 ENSOCUG00000016492 TMF1 (ENSOCUG00000008154) #17 UBA3 (ENSOCUG00000008169) #18 ARL6IP5 (ENSOCUG00000008184) #19 LMOD3 (ENSOCUG00000008188) #20 FRMD4B (ENSOCUG00000002887) #21 ENSOCUG00000026608 MITF (ENSOCUG00000002190) #22 MDFIC2 (ENSOCUG00000031604) #23 ENSOCUG00000036468 ENSOCUG00000035312 FOXP1 (ENSOCUG00000007155) #24 ENSOCUG00000000259 #26 PROK2 (ENSOCUG00000006542) #28 RYBP (ENSOCUG00000011730) #29 SHQ1 (ENSOCUG00000016695) #30 GXYLT2 (ENSOCUG00000016704) #31 PPP4R2 (ENSOCUG00000006235) PDZRN3 (ENSOCUG00000007731) #33 CNTN3 (ENSOCUG00000013181) #34 ENSOCUG00000030000 ENSOCUG00000033110 ENSOCUG00000024463 Pika MODERN SPECIES 2753 TAFA4 (ENSOPRG00000014591) #15 EOGT (ENSOPRG00000014602) #16 TMF1 (ENSOPRG00000014625) #17 UBA3 (ENSOPRG00000014649) #18 ARL6IP5 (ENSOPRG00000014669) #19 LMOD3 (ENSOPRG00000014678) #20 FRMD4B (ENSOPRG00000014691) #21 MITF (ENSOPRG00000014729) #22 Tree shrew MODERN SPECIES 4704 MITF (ENSTBEG00000017713) #22 Primates ANCESTRAL SPECIES 1 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 Haplorrhini ANCESTRAL SPECIES 5 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Simiiformes ANCESTRAL SPECIES 1 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000153510.a.f ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000169558 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Platyrrhini ANCESTRAL SPECIES 18 ENSGT00940000155820 #8 ENSGT00940000153783.b.b.c.a.a.b ENSGT00910000146882 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831.c #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000153510.a.f ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00490000044176 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000169558 ENSGT00940000160282 #34 Cebidae ANCESTRAL SPECIES 14 ENSGT00940000155820 #8 ENSGT00940000153783.b.b.c.a.a.b ENSGT00910000146882 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831.c #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000153510.a.f ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00490000044176 ENSGT00950000183062.a.a.a #33 ENSGT00940000169558 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Cebidae_a ANCESTRAL SPECIES 24 ENSGT00940000155820 #8 ENSGT00940000153783.b.b.c.a.a.b ENSGT00910000146882 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831.c #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000153510.a.f ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00490000044176 ENSGT00950000183062.a.a.a #33 ENSGT00940000169558 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Capuchin MODERN SPECIES 147 ENSCCAG00000023140 #9 LRIG1 (ENSCCAG00000033301) #10 KBTBD8 (ENSCCAG00000006761) #11 SUCLG2 (ENSCCAG00000028963) #12 TAFA1 (ENSCCAG00000026684) #13 TAFA4 (ENSCCAG00000024091) #15 EOGT (ENSCCAG00000025152) #16 ENSCCAG00000037451 TMF1 (ENSCCAG00000002333) #17 ENSCCAG00000003895 ENSCCAG00000023356 #18 ARL6IP5 (ENSCCAG00000022257) #19 LMOD3 (ENSCCAG00000027483) #20 FRMD4B (ENSCCAG00000033149) #21 ENSCCAG00000026482 MITF (ENSCCAG00000030554) #22 MDFIC2 (ENSCCAG00000000010) #23 FOXP1 (ENSCCAG00000032400) #24 ENSCCAG00000026912 CENPQ (ENSCCAG00000001112) GLYATL3 (ENSCCAG00000030719) Bolivian squirrel monkey MODERN SPECIES 156 ENSSBOG00000027899 TAFA4 (ENSSBOG00000027474) #15 EOGT (ENSSBOG00000025714) #16 ENSSBOG00000036317 TMF1 (ENSSBOG00000024217) #17 ENSSBOG00000028598 #18 ARL6IP5 (ENSSBOG00000033916) #19 LMOD3 (ENSSBOG00000031092) #20 FRMD4B (ENSSBOG00000029694) #21 MITF (ENSSBOG00000023784) #22 MDFIC2 (ENSSBOG00000022036) #23 FOXP1 (ENSSBOG00000027035) #24 EIF4E3 (ENSSBOG00000020647) #26 PROK2 (ENSSBOG00000029837) #28 RYBP (ENSSBOG00000024112) #29 SHQ1 (ENSSBOG00000021038) #30 ENSSBOG00000030665 GXYLT2 (ENSSBOG00000021809) #31 ENSSBOG00000030623 PPP4R2 (ENSSBOG00000018839) PDZRN3 (ENSSBOG00000029197) #33 CNTN3 (ENSSBOG00000013155) #34 Marmoset MODERN SPECIES 6 KBTBD8 (ENSCJAG00000044815) #11 ENSCJAG00000071204 SUCLG2 (ENSCJAG00000013610) #12 ENSCJAG00000013607 ENSCJAG00000051437 TAFA4 (ENSCJAG00000057637) #15 ENSCJAG00000077127 ENSCJAG00000083460 ENSCJAG00000080341 EOGT (ENSCJAG00000013564) #16 TMF1 (ENSCJAG00000013491) #17 UBA3 (ENSCJAG00000013395) #18 ARL6IP5 (ENSCJAG00000044302) #19 LMOD3 (ENSCJAG00000013357) #20 FRMD4B (ENSCJAG00000013312) #21 MITF (ENSCJAG00000013260) #22 MDFIC2 (ENSCJAG00000064939) #23 ENSCJAG00000072251 FOXP1 (ENSCJAG00000013138) #24 ENSCJAG00000044237 #26 GPR27 (ENSCJAG00000040260) #27 PROK2 (ENSCJAG00000080226) #28 ENSCJAG00000074041 ENSCJAG00000079742 ENSCJAG00000083199 RYBP (ENSCJAG00000053393) #29 SHQ1 (ENSCJAG00000015131) #30 ENSCJAG00000075002 GXYLT2 (ENSCJAG00000015146) #31 PPP4R2 (ENSCJAG00000041360) ENSCJAG00000079111 Mas night monkey MODERN SPECIES 1103 VPS41 (ENSANAG00000027607) ENSANAG00000001067 AMPH (ENSANAG00000023088) SLC25A26 (ENSANAG00000034578) #9 LRIG1 (ENSANAG00000020533) #10 KBTBD8 (ENSANAG00000032012) #11 SUCLG2 (ENSANAG00000033664) #12 TAFA1 (ENSANAG00000028819) #13 TAFA4 (ENSANAG00000020763) #15 EOGT (ENSANAG00000030876) #16 TMF1 (ENSANAG00000037546) #17 ENSANAG00000035877 #18 ARL6IP5 (ENSANAG00000021456) #19 LMOD3 (ENSANAG00000020335) #20 FRMD4B (ENSANAG00000034952) #21 MITF (ENSANAG00000033269) #22 MDFIC2 (ENSANAG00000031584) #23 ENSANAG00000020794 ENSANAG00000017661 FOXP1 (ENSANAG00000028269) #24 EIF4E3 (ENSANAG00000031727) #26 GPR27 (ENSANAG00000015856) #27 PROK2 (ENSANAG00000025790) #28 RYBP (ENSANAG00000027832) #29 ENSANAG00000029241 #30 ENSANAG00000033608 GXYLT2 (ENSANAG00000029166) #31 ENSANAG00000024156 #32 PDZRN3 (ENSANAG00000024526) #33 Catarrhini ANCESTRAL SPECIES 2 ENSGT00940000155820 #8 ENSGT00910000146882 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01040000240967 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00530000063786.a.m ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000153510.a.f ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000169558 ENSGT00940000160282 #34 Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00390000000306.g ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a.c #19 ENSGT01040000240967 ENSGT00390000008631.a.d.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00530000063786.a.m ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865.a.a #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000004169.b ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000153510.a.f ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000169558 Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00390000000306.g ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01040000240967 ENSGT00390000008631.a.d.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00530000063786.a.m ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865.a.a #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000004169.b ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Vervet Monkey MODERN SPECIES 14 ENSCSAG00000011762 SLC25A26 (ENSCSAG00000011735) #9 LRIG1 (ENSCSAG00000011724) #10 KBTBD8 (ENSCSAG00000011713) #11 SUCLG2 (ENSCSAG00000011704) #12 ENSCSAG00000011694 TAFA4 (ENSCSAG00000011689) #15 EOGT (ENSCSAG00000011678) #16 TMF1 (ENSCSAG00000011667) #17 UBA3 (ENSCSAG00000011650) #18 ARL6IP5 (ENSCSAG00000011634) #19 LMOD3 (ENSCSAG00000011626) #20 FRMD4B (ENSCSAG00000011618) #21 ENSCSAG00000018800 ENSCSAG00000011601 MITF (ENSCSAG00000011595) #22 ENSCSAG00000018802 FOXP1 (ENSCSAG00000011581) #24 ENSCSAG00000011556 #26 GPR27 (ENSCSAG00000018804) #27 RYBP (ENSCSAG00000011518) #29 SHQ1 (ENSCSAG00000011514) #30 GXYLT2 (ENSCSAG00000011498) #31 PPP4R2 (ENSCSAG00000011489) PDZRN3 (ENSCSAG00000011455) #33 CNTN3 (ENSCSAG00000011366) #34 CHL1 (ENSCSAG00000011267) #35 CNTN6 (ENSCSAG00000011221) #36 CNTN4 (ENSCSAG00000011111) #37 IL5RA (ENSCSAG00000011082) TRNT1 (ENSCSAG00000011052) Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00910000146882 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00390000000306.g ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01040000240967 ENSGT00390000008631.a.d.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00530000063786.a.m ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865.a.a #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000004169.b ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00910000146882 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00390000000306.g ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01040000240967 ENSGT00390000008631.a.d.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00530000063786.a.m ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865.a.a #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000004169.b ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Olive baboon MODERN SPECIES 11 KBTBD8 (ENSPANG00000024439) #11 ENSPANG00000040517 ENSPANG00000048748 SUCLG2 (ENSPANG00000019945) #12 TAFA1 (ENSPANG00000021491) #13 TAFA4 (ENSPANG00000043583) #15 ENSPANG00000022502 EOGT (ENSPANG00000012769) #16 TMF1 (ENSPANG00000014204) #17 ENSPANG00000029557 UBA3 (ENSPANG00000021492) #18 ARL6IP5 (ENSPANG00000006554) #19 LMOD3 (ENSPANG00000011422) #20 FRMD4B (ENSPANG00000022151) #21 ENSPANG00000030680 MITF (ENSPANG00000011565) #22 MDFIC2 (ENSPANG00000040564) #23 FOXP1 (ENSPANG00000009084) #24 ENSPANG00000024441 #26 GPR27 (ENSPANG00000037165) #27 PROK2 (ENSPANG00000031802) #28 RYBP (ENSPANG00000046879) #29 ENSPANG00000043336 SHQ1 (ENSPANG00000002881) #30 ENSPANG00000041507 GXYLT2 (ENSPANG00000023883) #31 PPP4R2 (ENSPANG00000004247) PDZRN3 (ENSPANG00000011423) #33 CNTN3 (ENSPANG00000011424) #34 ENSPANG00000049590 CHL1 (ENSPANG00000007743) #35 Cercopithecinae_d ANCESTRAL SPECIES 12 ENSGT00910000146882 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00390000000306.g ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01040000240967 ENSGT00390000008631.a.d.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00530000063786.a.m ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865.a.a #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000004169.b ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Drill MODERN SPECIES 264 TAFA1 (ENSMLEG00000028061) #13 TAFA4 (ENSMLEG00000035873) #15 EOGT (ENSMLEG00000026880) #16 TMF1 (ENSMLEG00000035288) #17 UBA3 (ENSMLEG00000043478) #18 ENSMLEG00000035493 ARL6IP5 (ENSMLEG00000032302) #19 LMOD3 (ENSMLEG00000008625) #20 FRMD4B (ENSMLEG00000034545) #21 MITF (ENSMLEG00000039415) #22 ENSMLEG00000034644 MDFIC2 (ENSMLEG00000007420) #23 FOXP1 (ENSMLEG00000037250) #24 ENSMLEG00000038551 #26 ENSMLEG00000010756 PROK2 (ENSMLEG00000030120) #28 ENSMLEG00000037986 RYBP (ENSMLEG00000038150) #29 SHQ1 (ENSMLEG00000038493) #30 GXYLT2 (ENSMLEG00000000099) #31 PPP4R2 (ENSMLEG00000040160) PRR23E (ENSMLEG00000030492) ENSMLEG00000026183 TPRA1 (ENSMLEG00000034167) MCM2 (ENSMLEG00000038079) Sooty mangabey MODERN SPECIES 650 SLC25A26 (ENSCATG00000041774) #9 LRIG1 (ENSCATG00000034849) #10 KBTBD8 (ENSCATG00000044556) #11 ENSCATG00000015873 #12 ENSCATG00000041909 TAFA1 (ENSCATG00000043084) #13 TAFA4 (ENSCATG00000041495) #15 ENSCATG00000041655 EOGT (ENSCATG00000042477) #16 TMF1 (ENSCATG00000042507) #17 UBA3 (ENSCATG00000043878) #18 ENSCATG00000029114 ARL6IP5 (ENSCATG00000029543) #19 LMOD3 (ENSCATG00000014427) #20 FRMD4B (ENSCATG00000041747) #21 MITF (ENSCATG00000036190) #22 ENSCATG00000035930 MDFIC2 (ENSCATG00000030313) #23 FOXP1 (ENSCATG00000044155) #24 ENSCATG00000042150 #26 GPR27 (ENSCATG00000022613) #27 ENSCATG00000004327 PROK2 (ENSCATG00000034783) #28 ENSCATG00000036252 RYBP (ENSCATG00000034872) #29 SHQ1 (ENSCATG00000041238) #30 GXYLT2 (ENSCATG00000041906) #31 PPP4R2 (ENSCATG00000043982) PDZRN3 (ENSCATG00000011356) #33 CNTN3 (ENSCATG00000034171) #34 CHL1 (ENSCATG00000029263) #35 Macaca ANCESTRAL SPECIES 5 ENSGT00940000155820 #8 ENSGT00910000146882 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01040000240967 ENSGT00390000008631.a.d.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865.a.a #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Macaca_a ANCESTRAL SPECIES 5 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01040000240967 ENSGT00390000008631.a.d.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865.a.a #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Rhesus MODERN SPECIES 11 MAGI1 (ENSMMUG00000017510) #8 ENSMMUG00000057539 SLC25A26 (ENSMMUG00000001529) #9 LRIG1 (ENSMMUG00000001531) #10 ENSMMUG00000054412 KBTBD8 (ENSMMUG00000049226) #11 SUCLG2 (ENSMMUG00000009693) #12 TAFA1 (ENSMMUG00000013847) #13 TAFA4 (ENSMMUG00000050069) #15 EOGT (ENSMMUG00000011090) #16 TMF1 (ENSMMUG00000008616) #17 UBA3 (ENSMMUG00000008620) #18 ARL6IP5 (ENSMMUG00000058373) #19 LMOD3 (ENSMMUG00000008628) #20 FRMD4B (ENSMMUG00000000387) #21 MITF (ENSMMUG00000002100) #22 MDFIC2 (ENSMMUG00000057543) #23 FOXP1 (ENSMMUG00000002889) #24 EIF4E3 (ENSMMUG00000007780) #26 GPR27 (ENSMMUG00000040565) #27 PROK2 (ENSMMUG00000018494) #28 RYBP (ENSMMUG00000042444) #29 SHQ1 (ENSMMUG00000009571) #30 GXYLT2 (ENSMMUG00000022507) #31 PPP4R2 (ENSMMUG00000016959) ENSMMUG00000064384 PDZRN3 (ENSMMUG00000012661) #33 ENSMMUG00000051810 CNTN3 (ENSMMUG00000021241) #34 CHL1 (ENSMMUG00000001349) #35 CNTN6 (ENSMMUG00000008549) #36 Crab-eating macaque MODERN SPECIES 11 MAGI1 (ENSMFAG00000032287) #8 ENSMFAG00000047524 SLC25A26 (ENSMFAG00000000714) #9 LRIG1 (ENSMFAG00000033439) #10 KBTBD8 (ENSMFAG00000003507) #11 SUCLG2 (ENSMFAG00000041500) #12 TAFA1 (ENSMFAG00000034201) #13 TAFA4 (ENSMFAG00000020992) #15 EOGT (ENSMFAG00000041998) #16 TMF1 (ENSMFAG00000037002) #17 UBA3 (ENSMFAG00000036648) #18 ENSMFAG00000051018 ARL6IP5 (ENSMFAG00000001584) #19 LMOD3 (ENSMFAG00000044328) #20 FRMD4B (ENSMFAG00000040109) #21 MITF (ENSMFAG00000038478) #22 MDFIC2 (ENSMFAG00000042217) #23 FOXP1 (ENSMFAG00000033964) #24 EIF4E3 (ENSMFAG00000039909) #26 GPR27 (ENSMFAG00000053255) #27 ENSMFAG00000024958 PROK2 (ENSMFAG00000003820) #28 RYBP (ENSMFAG00000049247) #29 ENSMFAG00000048279 SHQ1 (ENSMFAG00000039148) #30 GXYLT2 (ENSMFAG00000044294) #31 PPP4R2 (ENSMFAG00000042258) PDZRN3 (ENSMFAG00000000986) #33 CNTN3 (ENSMFAG00000045446) #34 CHL1 (ENSMFAG00000040804) #35 CNTN6 (ENSMFAG00000001088) #36 Pig-tailed macaque MODERN SPECIES 560 MITF (ENSMNEG00000036173) #22 ENSMNEG00000013127 ENSMNEG00000029209 MDFIC2 (ENSMNEG00000043959) #23 FOXP1 (ENSMNEG00000028530) #24 ENSMNEG00000035212 #26 GPR27 (ENSMNEG00000017685) #27 ENSMNEG00000006444 PROK2 (ENSMNEG00000035459) #28 RYBP (ENSMNEG00000010262) #29 SHQ1 (ENSMNEG00000032667) #30 GXYLT2 (ENSMNEG00000031743) #31 ENSMNEG00000014462 PDZRN3 (ENSMNEG00000034940) #33 ENSMNEG00000038271 CNTN3 (ENSMNEG00000035492) #34 Rhinopithecus ANCESTRAL SPECIES 972 ENSGT00940000156326 #22 ENSGT00530000063786.a.m Black snub-nosed monkey MODERN SPECIES 2555 ENSRBIG00000036941 MITF (ENSRBIG00000016206) #22 ENSRBIG00000010768 Golden snub-nosed monkey MODERN SPECIES 2358 MITF (ENSRROG00000030415) #22 ENSRROG00000040420 Hominoidea ANCESTRAL SPECIES 2 ENSGT00940000155820 #8 ENSGT00910000146882 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01040000240967 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00530000063786.a.m ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00490000044176.b.b ENSGT00940000160975.g ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Hominidae ANCESTRAL SPECIES 2 ENSGT00940000155820 #8 ENSGT00910000146882 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01040000240967 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00530000063786.a.m ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00490000044176.b.b ENSGT00940000160975.g ENSGT00950000183062.a.a.a #33 ENSGT00940000153272.a.b.o.b.b ENSGT00940000160282 #34 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00940000155820 #8 ENSGT00910000146882 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01040000240967 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00530000063786.a.m ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00490000044176.b.b ENSGT00940000160975.g ENSGT00950000183062.a.a.a #33 ENSGT00940000153272.a.b.o.b.b ENSGT00940000160282 #34 Gorilla MODERN SPECIES 16 ENSGGOG00000036595 #9 LRIG1 (ENSGGOG00000014317) #10 KBTBD8 (ENSGGOG00000023751) #11 SUCLG2 (ENSGGOG00000027438) #12 ENSGGOG00000042425 TAFA1 (ENSGGOG00000011732) #13 ENSGGOG00000012362 TAFA4 (ENSGGOG00000010868) #15 EOGT (ENSGGOG00000034885) #16 TMF1 (ENSGGOG00000006754) #17 UBA3 (ENSGGOG00000003959) #18 ENSGGOG00000036802 ARL6IP5 (ENSGGOG00000000983) #19 LMOD3 (ENSGGOG00000015200) #20 FRMD4B (ENSGGOG00000002181) #21 MITF (ENSGGOG00000024338) #22 ENSGGOG00000026201 MDFIC2 (ENSGGOG00000043971) #23 RNF151 (ENSGGOG00000009376) FOXP1 (ENSGGOG00000010391) #24 ENSGGOG00000042096 #26 GPR27 (ENSGGOG00000010203) #27 ENSGGOG00000039593 PROK2 (ENSGGOG00000024537) #28 RYBP (ENSGGOG00000040802) #29 SHQ1 (ENSGGOG00000034818) #30 GXYLT2 (ENSGGOG00000005057) #31 ENSGGOG00000043304 PPP4R2 (ENSGGOG00000008408) ENSGGOG00000005021 PDZRN3 (ENSGGOG00000008313) #33 Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00940000155820 #8 ENSGT00910000146882 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01040000240967 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00530000063786.a.m ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00490000044176.b.b ENSGT00940000160975.g ENSGT00950000183062.a.a.a #33 ENSGT00940000153272.a.b.o.b.b ENSGT00940000160282 #34 Pan ANCESTRAL SPECIES 2 ENSGT00940000155820 #8 ENSGT00910000146882 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01040000240967 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00530000063786.a.m ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000153510.a.f ENSGT00940000158065 #31 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.c.b.b ENSGT00940000160975.g ENSGT00490000044176.b.b ENSGT00440000039029.g.b Bonobo MODERN SPECIES 16 ENSPPAG00000023910 #8 ENSPPAG00000032911 SLC25A26 (ENSPPAG00000030070) #9 LRIG1 (ENSPPAG00000041400) #10 KBTBD8 (ENSPPAG00000041680) #11 SUCLG2 (ENSPPAG00000035499) #12 ENSPPAG00000033694 ENSPPAG00000032744 #13 TAFA4 (ENSPPAG00000038870) #15 EOGT (ENSPPAG00000040173) #16 TMF1 (ENSPPAG00000042538) #17 UBA3 (ENSPPAG00000031816) #18 ARL6IP5 (ENSPPAG00000033634) #19 LMOD3 (ENSPPAG00000033796) #20 FRMD4B (ENSPPAG00000021170) #21 MITF (ENSPPAG00000041237) #22 ENSPPAG00000030278 MDFIC2 (ENSPPAG00000036914) #23 FOXP1 (ENSPPAG00000039148) #24 ENSPPAG00000035020 #26 ENSPPAG00000038441 PROK2 (ENSPPAG00000038388) #28 RYBP (ENSPPAG00000039197) #29 SHQ1 (ENSPPAG00000027714) #30 ENSPPAG00000029534 GXYLT2 (ENSPPAG00000037639) #31 ENSPPAG00000009897 PPP4R2 (ENSPPAG00000042397) EBLN2 (ENSPPAG00000043421) ENSPPAG00000022036 PDZRN3 (ENSPPAG00000037945) #33 Chimpanzee MODERN SPECIES 16 MAGI1 (ENSPTRG00000015083) #8 ENSPTRG00000046672 SLC25A26 (ENSPTRG00000015084) #9 LRIG1 (ENSPTRG00000015085) #10 KBTBD8 (ENSPTRG00000015086) #11 SUCLG2 (ENSPTRG00000046048) #12 TAFA1 (ENSPTRG00000015088) #13 TAFA4 (ENSPTRG00000015091) #15 EOGT (ENSPTRG00000015092) #16 TMF1 (ENSPTRG00000015094) #17 UBA3 (ENSPTRG00000015095) #18 ENSPTRG00000048155 ARL6IP5 (ENSPTRG00000015096) #19 LMOD3 (ENSPTRG00000015097) #20 FRMD4B (ENSPTRG00000015098) #21 MITF (ENSPTRG00000015100) #22 ENSPTRG00000044227 MDFIC2 (ENSPTRG00000044422) #23 FOXP1 (ENSPTRG00000015101) #24 EIF4E3 (ENSPTRG00000015102) #26 GPR27 (ENSPTRG00000015103) #27 ENSPTRG00000048214 PROK2 (ENSPTRG00000015104) #28 RYBP (ENSPTRG00000051886) #29 SHQ1 (ENSPTRG00000015106) #30 ENSPTRG00000044295 ENSPTRG00000048729 PPP4R2 (ENSPTRG00000015108) #31 ENSPTRG00000049304 ENSPTRG00000040549 ENSPTRG00000043397 Human MODERN SPECIES 15 PRICKLE2 (ENSG00000163637) ADAMTS9 (ENSG00000163638) MAGI1 (ENSG00000151276) #8 SLC25A26 (ENSG00000144741) #9 LRIG1 (ENSG00000144749) #10 KBTBD8 (ENSG00000163376) #11 SUCLG2 (ENSG00000172340) #12 TAFA1 (ENSG00000183662) #13 TAFA4 (ENSG00000163377) #15 EOGT (ENSG00000163378) #16 TMF1 (ENSG00000144747) #17 UBA3 (ENSG00000144744) #18 ARL6IP5 (ENSG00000144746) #19 LMOD3 (ENSG00000163380) #20 FRMD4B (ENSG00000114541) #21 MITF (ENSG00000187098) #22 MDFIC2 (ENSG00000242120) #23 FOXP1 (ENSG00000114861) #24 ENSG00000285708 EIF4E3 (ENSG00000163412) #26 GPR27 (ENSG00000170837) #27 PROK2 (ENSG00000163421) #28 RYBP (ENSG00000163602) #29 SHQ1 (ENSG00000144736) #30 GXYLT2 (ENSG00000172986) #31 PPP4R2 (ENSG00000163605) EBLN2 (ENSG00000255423) PDZRN3 (ENSG00000121440) #33 CNTN3 (ENSG00000113805) #34 FRG2C (ENSG00000172969) ZNF717 (ENSG00000227124) Orangutan MODERN SPECIES 16 ADAMTS9 (ENSPPYG00000013740) MAGI1 (ENSPPYG00000013739) #8 SLC25A26 (ENSPPYG00000013738) #9 LRIG1 (ENSPPYG00000013737) #10 KBTBD8 (ENSPPYG00000038565) #11 SUCLG2 (ENSPPYG00000013735) #12 TAFA1 (ENSPPYG00000013733) #13 ENSPPYG00000035430 #15 EOGT (ENSPPYG00000013731) #16 TMF1 (ENSPPYG00000013730) #17 ENSPPYG00000038623 UBA3 (ENSPPYG00000013729) #18 ARL6IP5 (ENSPPYG00000013728) #19 LMOD3 (ENSPPYG00000013727) #20 FRMD4B (ENSPPYG00000013726) #21 MITF (ENSPPYG00000013725) #22 MDFIC2 (ENSPPYG00000041220) #23 FOXP1 (ENSPPYG00000013722) #24 EIF4E3 (ENSPPYG00000033784) #26 GPR27 (ENSPPYG00000013720) #27 PROK2 (ENSPPYG00000013719) #28 RYBP (ENSPPYG00000033076) #29 SHQ1 (ENSPPYG00000013717) #30 ENSPPYG00000038319 GXYLT2 (ENSPPYG00000013716) #31 PPP4R2 (ENSPPYG00000013715) PDZRN3 (ENSPPYG00000013713) #33 CNTN3 (ENSPPYG00000013710) #34 CHL1 (ENSPPYG00000013709) #35 ENSPPYG00000013708 CNTN6 (ENSPPYG00000013706) #36 Gibbon MODERN SPECIES 13 ENSNLEG00000007539 #9 LRIG1 (ENSNLEG00000007544) #10 KBTBD8 (ENSNLEG00000007551) #11 ENSNLEG00000007553 #12 ENSNLEG00000018553 ENSNLEG00000001961 ENSNLEG00000001966 TAFA4 (ENSNLEG00000001971) #15 EOGT (ENSNLEG00000001976) #16 TMF1 (ENSNLEG00000002036) #17 ENSNLEG00000031694 UBA3 (ENSNLEG00000002198) #18 ARL6IP5 (ENSNLEG00000029362) #19 LMOD3 (ENSNLEG00000002236) #20 FRMD4B (ENSNLEG00000002248) #21 MITF (ENSNLEG00000002357) #22 ENSNLEG00000029106 ENSNLEG00000002490 MDFIC2 (ENSNLEG00000030576) #23 FOXP1 (ENSNLEG00000002497) #24 ENSNLEG00000002684 #26 PROK2 (ENSNLEG00000002696) #28 RYBP (ENSNLEG00000031222) #29 SHQ1 (ENSNLEG00000002731) #30 ENSNLEG00000029680 GXYLT2 (ENSNLEG00000002790) #31 ENSNLEG00000035814 PPP4R2 (ENSNLEG00000029576) PDZRN3 (ENSNLEG00000002833) #33 ENSNLEG00000036254 CNTN3 (ENSNLEG00000002884) #34 Tarsier MODERN SPECIES 3474 MITF (ENSTSYG00000037534) #22 Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Bushbaby MODERN SPECIES 130 SLC25A26 (ENSOGAG00000002219) #9 ENSOGAG00000007944 LRIG1 (ENSOGAG00000002220) #10 ENSOGAG00000006131 ENSOGAG00000024724 KBTBD8 (ENSOGAG00000024533) #11 ENSOGAG00000006190 #12 ENSOGAG00000028255 TAFA4 (ENSOGAG00000012090) #15 EOGT (ENSOGAG00000012093) #16 TMF1 (ENSOGAG00000007764) #17 UBA3 (ENSOGAG00000007771) #18 ARL6IP5 (ENSOGAG00000007773) #19 LMOD3 (ENSOGAG00000002704) #20 FRMD4B (ENSOGAG00000002705) #21 MITF (ENSOGAG00000000043) #22 MDFIC2 (ENSOGAG00000030030) #23 FOXP1 (ENSOGAG00000008367) #24 ENSOGAG00000027936 EIF4E3 (ENSOGAG00000014590) #26 GPR27 (ENSOGAG00000032511) #27 PROK2 (ENSOGAG00000014593) #28 ENSOGAG00000033425 ENSOGAG00000030955 SHQ1 (ENSOGAG00000003898) #30 GXYLT2 (ENSOGAG00000006647) #31 PPP4R2 (ENSOGAG00000011001) PDZRN3 (ENSOGAG00000031641) #33 CNTN3 (ENSOGAG00000017171) #34 CHL1 (ENSOGAG00000012057) #35 CNTN6 (ENSOGAG00000002731) #36 Lemuriformes ANCESTRAL SPECIES 73 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Lemuriformes_a ANCESTRAL SPECIES 211 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 Greater bamboo lemur MODERN SPECIES 657 TAFA4 (ENSPSMG00000017971) #15 EOGT (ENSPSMG00000017952) #16 TMF1 (ENSPSMG00000017887) #17 UBA3 (ENSPSMG00000017781) #18 ENSPSMG00000017713 #19 LMOD3 (ENSPSMG00000017702) #20 FRMD4B (ENSPSMG00000017680) #21 MITF (ENSPSMG00000017533) #22 MDFIC2 (ENSPSMG00000017390) #23 FOXP1 (ENSPSMG00000016990) #24 EIF4E3 (ENSPSMG00000016679) #26 GPR27 (ENSPSMG00000016654) #27 PROK2 (ENSPSMG00000016641) #28 RYBP (ENSPSMG00000016629) #29 Coquerels sifaka MODERN SPECIES 640 EOGT (ENSPCOG00000013655) #16 TMF1 (ENSPCOG00000018034) #17 UBA3 (ENSPCOG00000014784) #18 ENSPCOG00000020725 #19 LMOD3 (ENSPCOG00000019527) #20 FRMD4B (ENSPCOG00000025968) #21 MITF (ENSPCOG00000026384) #22 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 25 DBN1 (ENSMICG00000012144) PDLIM7 (ENSMICG00000012163) DOK3 (ENSMICG00000037622) DDX41 (ENSMICG00000007919) FAM193B (ENSMICG00000007937) TMED9 (ENSMICG00000027542) B4GALT7 (ENSMICG00000034153) N4BP3 (ENSMICG00000033359) RMND5B (ENSMICG00000005367) NHP2 (ENSMICG00000005379) HNRNPAB (ENSMICG00000027030) PHYKPL (ENSMICG00000005397) COL23A1 (ENSMICG00000005409) CLK4 (ENSMICG00000038063) ZNF354A (ENSMICG00000006390) MITF (ENSMICG00000002894) #22 MDFIC2 (ENSMICG00000032034) #23 FOXP1 (ENSMICG00000005350) #24 EIF4E3 (ENSMICG00000001125) #26 GPR27 (ENSMICG00000032202) #27 PROK2 (ENSMICG00000001127) #28 RYBP (ENSMICG00000045355) #29 SHQ1 (ENSMICG00000009224) #30 GXYLT2 (ENSMICG00000036477) #31 ENSMICG00000042500 PDZRN3 (ENSMICG00000028272) #33 ENSMICG00000038029 CNTN3 (ENSMICG00000006231) #34 CHL1 (ENSMICG00000010518) #35 CNTN6 (ENSMICG00000001000) #36 Mouse lemur MODERN SPECIES 30 ENSMICG00000012789 HPCAL1 (ENSMICG00000029256) ENSMICG00000012511 NOL10 (ENSMICG00000004805) ATP6V1C2 (ENSMICG00000017366) ENSMICG00000017368 KCNF1 (ENSMICG00000017370) ROCK2 (ENSMICG00000037673) ENSMICG00000028029 E2F6 (ENSMICG00000017705) GREB1 (ENSMICG00000017707) NTSR2 (ENSMICG00000017708) LPIN1 (ENSMICG00000017709) TRIB2 (ENSMICG00000031869) LRATD1 (ENSMICG00000042880) ENSMICG00000036925 #22 NBAS (ENSMICG00000001009) DDX1 (ENSMICG00000001023) MYCN (ENSMICG00000013903) CYRIA (ENSMICG00000013924) RAD51AP2 (ENSMICG00000038023) VSNL1 (ENSMICG00000036354) SMC6 (ENSMICG00000010802) GEN1 (ENSMICG00000026479) ENSMICG00000029479 RDH14 (ENSMICG00000033814) NT5C1B (ENSMICG00000010847) OSR1 (ENSMICG00000004493) ENSMICG00000041804 WDR35 (ENSMICG00000037969) MATN3 (ENSMICG00000032185) Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000156326 #22 Hedgehog MODERN SPECIES 7854 MITF (ENSEEUG00000005163) #22 Common shrew MODERN SPECIES 6171 MITF (ENSSARG00000002538) #22 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Equus ANCESTRAL SPECIES 5 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Donkey MODERN SPECIES 13 PRICKLE2 (ENSEASG00005001555) ADAMTS9 (ENSEASG00005001635) MAGI1 (ENSEASG00005001878) #8 SLC25A26 (ENSEASG00005001893) #9 LRIG1 (ENSEASG00005001905) #10 KBTBD8 (ENSEASG00005001917) #11 SUCLG2 (ENSEASG00005001928) #12 ENSEASG00005030093 TAFA4 (ENSEASG00005034543) #15 EOGT (ENSEASG00005001959) #16 TMF1 (ENSEASG00005001971) #17 UBA3 (ENSEASG00005002027) #18 ARL6IP5 (ENSEASG00005031455) #19 LMOD3 (ENSEASG00005002161) #20 FRMD4B (ENSEASG00005002162) #21 MITF (ENSEASG00005002172) #22 MDFIC2 (ENSEASG00005002178) #23 FOXP1 (ENSEASG00005002186) #24 EIF4E3 (ENSEASG00005002204) #26 GPR27 (ENSEASG00005027995) #27 PROK2 (ENSEASG00005033363) #28 RYBP (ENSEASG00005029789) #29 SHQ1 (ENSEASG00005002237) #30 GXYLT2 (ENSEASG00005002247) #31 PPP4R2 (ENSEASG00005002252) PDZRN3 (ENSEASG00005002263) #33 ENSEASG00005002280 #34 ENSEASG00005002560 #35 ENSEASG00005032406 CNTN6 (ENSEASG00005003549) #36 CNTN4 (ENSEASG00005003558) #37 Horse MODERN SPECIES 7 PRICKLE2 (ENSECAG00000018642) ADAMTS9 (ENSECAG00000019880) MAGI1 (ENSECAG00000016431) #8 SLC25A26 (ENSECAG00000015020) #9 LRIG1 (ENSECAG00000009328) #10 KBTBD8 (ENSECAG00000007088) #11 SUCLG2 (ENSECAG00000023254) #12 ENSECAG00000029066 TAFA1 (ENSECAG00000032991) #13 TAFA4 (ENSECAG00000038857) #15 EOGT (ENSECAG00000012398) #16 TMF1 (ENSECAG00000023300) #17 UBA3 (ENSECAG00000009659) #18 LMOD3 (ENSECAG00000008709) #20 FRMD4B (ENSECAG00000016131) #21 MITF (ENSECAG00000005360) #22 MDFIC2 (ENSECAG00000029574) #23 ENSECAG00000054670 FOXP1 (ENSECAG00000008974) #24 EIF4E3 (ENSECAG00000004471) #26 GPR27 (ENSECAG00000032664) #27 RYBP (ENSECAG00000000266) #29 SHQ1 (ENSECAG00000015673) #30 GXYLT2 (ENSECAG00000008483) #31 PPP4R2 (ENSECAG00000000689) PDZRN3 (ENSECAG00000014864) #33 CNTN3 (ENSECAG00000013575) #34 CHL1 (ENSECAG00000024808) #35 ENSECAG00000027842 CNTN6 (ENSECAG00000015975) #36 CNTN4 (ENSECAG00000009769) #37 Chiroptera ANCESTRAL SPECIES 49 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 Megabat MODERN SPECIES 2896 MITF (ENSPVAG00000008339) #22 ENSPVAG00000008341 Microchiroptera ANCESTRAL SPECIES 47 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 Greater horseshoe bat MODERN SPECIES 8 RPL39_1 (ENSRFEG00010013864) SLC25A26 (ENSRFEG00010013884) #9 LRIG1 (ENSRFEG00010013972) #10 ENSRFEG00010014101 KBTBD8 (ENSRFEG00010014117) #11 ENSRFEG00010014173 SUCLG2 (ENSRFEG00010014251) #12 TAFA1 (ENSRFEG00010014395) #13 TAFA4 (ENSRFEG00010014473) #15 EOGT (ENSRFEG00010014576) #16 TMF1 (ENSRFEG00010014693) #17 UBA3 (ENSRFEG00010015449) #18 ARL6IP5 (ENSRFEG00010015607) #19 LMOD3 (ENSRFEG00010015673) #20 FRMD4B (ENSRFEG00010015709) #21 MITF (ENSRFEG00010015864) #22 MDFIC2 (ENSRFEG00010016226) #23 FOXP1 (ENSRFEG00010016312) #24 ENSRFEG00010016733 EIF4E3 (ENSRFEG00010016785) #26 GPR27 (ENSRFEG00010016845) #27 PROK2 (ENSRFEG00010016865) #28 ENSRFEG00010016965 RYBP (ENSRFEG00010017002) #29 ENSRFEG00010017032 SHQ1 (ENSRFEG00010017046) #30 GXYLT2 (ENSRFEG00010017092) #31 PPP4R2 (ENSRFEG00010017298) ENSRFEG00010017338 Microbat MODERN SPECIES 1060 SUCLG2 (ENSMLUG00000017294) #12 ENSMLUG00000022506 ENSMLUG00000030730 ENSMLUG00000027207 ENSMLUG00000022215 EOGT (ENSMLUG00000009777) #16 TMF1 (ENSMLUG00000005442) #17 UBA3 (ENSMLUG00000005450) #18 ARL6IP5 (ENSMLUG00000005457) #19 LMOD3 (ENSMLUG00000005461) #20 FRMD4B (ENSMLUG00000005465) #21 ENSMLUG00000030468 MITF (ENSMLUG00000002587) #22 MDFIC2 (ENSMLUG00000025844) #23 ENSMLUG00000026958 ENSMLUG00000025354 FOXP1 (ENSMLUG00000007219) #24 ENSMLUG00000030331 Carnivora ANCESTRAL SPECIES 6 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 Felidae ANCESTRAL SPECIES 17 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00390000008694.b.b.d ENSGT00940000160080 #35 ENSGT00940000160606 #36 Panthera ANCESTRAL SPECIES 1 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00390000008694.b.b.d ENSGT00940000160080 #35 ENSGT00940000160606 #36 Tiger MODERN SPECIES 84 MITF (ENSPTIG00000018345) #22 MDFIC2 (ENSPTIG00000018110) #23 FOXP1 (ENSPTIG00000013377) #24 EIF4E3 (ENSPTIG00000012645) #26 PROK2 (ENSPTIG00000012482) #28 RYBP (ENSPTIG00000012035) #29 SHQ1 (ENSPTIG00000011478) #30 GXYLT2 (ENSPTIG00000010984) #31 PPP4R2 (ENSPTIG00000009981) PDZRN3 (ENSPTIG00000009301) #33 CNTN3 (ENSPTIG00000009144) #34 CHL1 (ENSPTIG00000020653) #35 CNTN6 (ENSPTIG00000020221) #36 CNTN4 (ENSPTIG00000015205) #37 IL5RA (ENSPTIG00000012294) TRNT1 (ENSPTIG00000011448) Panthera_a ANCESTRAL SPECIES ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 leopard MODERN SPECIES 116 MITF (ENSPPRG00000005395) #22 MDFIC2 (ENSPPRG00000004980) #23 FOXP1 (ENSPPRG00000004953) #24 EIF4E3 (ENSPPRG00000004898) #26 GPR27 (ENSPPRG00000012074) #27 PROK2 (ENSPPRG00000004876) #28 RYBP (ENSPPRG00000004794) #29 SHQ1 (ENSPPRG00000004769) #30 ENSPPRG00000004671 GXYLT2 (ENSPPRG00000004662) #31 PPP4R2 (ENSPPRG00000004654) PDZRN3 (ENSPPRG00000004645) #33 ENSPPRG00000004594 CNTN3 (ENSPPRG00000004510) #34 ENSPPRG00000004436 CHL1 (ENSPPRG00000004383) #35 lion MODERN SPECIES 2 PRICKLE2 (ENSPLOG00000000862) ADAMTS9 (ENSPLOG00000000956) MAGI1 (ENSPLOG00000001257) #8 SLC25A26 (ENSPLOG00000001581) #9 LRIG1 (ENSPLOG00000001605) #10 KBTBD8 (ENSPLOG00000001624) #11 SUCLG2 (ENSPLOG00000001663) #12 TAFA1 (ENSPLOG00000001704) #13 TAFA4 (ENSPLOG00000001723) #15 EOGT (ENSPLOG00000001756) #16 TMF1 (ENSPLOG00000001823) #17 UBA3 (ENSPLOG00000001974) #18 ARL6IP5 (ENSPLOG00000002134) #19 LMOD3 (ENSPLOG00000002158) #20 FRMD4B (ENSPLOG00000002200) #21 MITF (ENSPLOG00000002275) #22 MDFIC2 (ENSPLOG00000002362) #23 FOXP1 (ENSPLOG00000002481) #24 EIF4E3 (ENSPLOG00000002754) #26 GPR27 (ENSPLOG00000002789) #27 PROK2 (ENSPLOG00000002807) #28 RYBP (ENSPLOG00000002820) #29 SHQ1 (ENSPLOG00000002849) #30 GXYLT2 (ENSPLOG00000002888) #31 PPP4R2 (ENSPLOG00000002914) PDZRN3 (ENSPLOG00000003033) #33 CNTN3 (ENSPLOG00000003083) #34 CHL1 (ENSPLOG00000003228) #35 ENSPLOG00000003473 CNTN6 (ENSPLOG00000003490) #36 ENSPLOG00000003587 Cat MODERN SPECIES 1 ADAMTS9 (ENSFCAG00000001564) MAGI1 (ENSFCAG00000009340) #8 SLC25A26 (ENSFCAG00000003149) #9 LRIG1 (ENSFCAG00000003151) #10 KBTBD8 (ENSFCAG00000011921) #11 SUCLG2 (ENSFCAG00000007716) #12 TAFA1 (ENSFCAG00000041196) #13 TAFA4 (ENSFCAG00000031787) #15 EOGT (ENSFCAG00000006082) #16 TMF1 (ENSFCAG00000027162) #17 UBA3 (ENSFCAG00000023111) #18 ARL6IP5 (ENSFCAG00000041359) #19 LMOD3 (ENSFCAG00000009020) #20 FRMD4B (ENSFCAG00000009021) #21 ENSFCAG00000034689 MITF (ENSFCAG00000024419) #22 MDFIC2 (ENSFCAG00000026251) #23 FOXP1 (ENSFCAG00000023059) #24 EIF4E3 (ENSFCAG00000025548) #26 GPR27 (ENSFCAG00000041717) #27 PROK2 (ENSFCAG00000032697) #28 RYBP (ENSFCAG00000043691) #29 SHQ1 (ENSFCAG00000012781) #30 GXYLT2 (ENSFCAG00000011005) #31 PPP4R2 (ENSFCAG00000029481) PDZRN3 (ENSFCAG00000040417) #33 CNTN3 (ENSFCAG00000012778) #34 ENSFCAG00000005652 CHL1 (ENSFCAG00000011105) #35 ENSFCAG00000034166 CNTN6 (ENSFCAG00000015456) #36 Caniformia ANCESTRAL SPECIES 4 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606.d #36 Caniformia_b ANCESTRAL SPECIES 16 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606.d #36 ENSGT00940000155198.C #37 Ursidae ANCESTRAL SPECIES 11 ENSGT00940000155820 #8 ENSGT00950000185438 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000018085.a.b.a.c.b ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a.l #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00940000173944 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00390000000263.fb.a ENSGT00940000160080.b #35 ENSGT00940000160606.d #36 Ursus ANCESTRAL SPECIES 89 ENSGT00940000155820 #8 ENSGT00950000185438 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000018085.a.b.a.c.b ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a.l #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00940000173944 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00390000000263.fb.a ENSGT00940000160080.b #35 ENSGT00940000160606.d #36 Polar bear MODERN SPECIES 251 ENSUMAG00000023661 SLC25A26 (ENSUMAG00000023664) #9 LRIG1 (ENSUMAG00000023677) #10 KBTBD8 (ENSUMAG00000023807) #11 ENSUMAG00000023808 SUCLG2 (ENSUMAG00000023841) #12 ENSUMAG00000023985 TAFA4 (ENSUMAG00000023986) #15 EOGT (ENSUMAG00000023987) #16 TMF1 (ENSUMAG00000023989) #17 UBA3 (ENSUMAG00000023994) #18 ARL6IP5 (ENSUMAG00000023996) #19 LMOD3 (ENSUMAG00000023997) #20 ENSUMAG00000023998 FRMD4B (ENSUMAG00000023999) #21 MITF (ENSUMAG00000024001) #22 MDFIC2 (ENSUMAG00000024017) #23 FOXP1 (ENSUMAG00000024020) #24 EIF4E3 (ENSUMAG00000024023) #26 PROK2 (ENSUMAG00000024025) #28 RYBP (ENSUMAG00000024028) #29 ENSUMAG00000024029 SHQ1 (ENSUMAG00000024031) #30 GXYLT2 (ENSUMAG00000024033) #31 PPP4R2 (ENSUMAG00000024034) PDZRN3 (ENSUMAG00000024035) #33 CNTN3 (ENSUMAG00000024039) #34 ENSUMAG00000024046 CHL1 (ENSUMAG00000024060) #35 CNTN6 (ENSUMAG00000024080) #36 CNTN4 (ENSUMAG00000024088) #37 American black bear MODERN SPECIES 659 MITF (ENSUAMG00000023196) #22 MDFIC2 (ENSUAMG00000023206) #23 Giant Panda MODERN SPECIES 14 ENSAMEG00000027547 ENSAMEG00000028898 SLC25A26 (ENSAMEG00000025165) #9 LRIG1 (ENSAMEG00000009584) #10 KBTBD8 (ENSAMEG00000004044) #11 ENSAMEG00000004042 SUCLG2 (ENSAMEG00000002805) #12 TAFA1 (ENSAMEG00000025281) #13 ENSAMEG00000028238 #15 EOGT (ENSAMEG00000010169) #16 TMF1 (ENSAMEG00000010131) #17 UBA3 (ENSAMEG00000010117) #18 ARL6IP5 (ENSAMEG00000010112) #19 LMOD3 (ENSAMEG00000010109) #20 FRMD4B (ENSAMEG00000010064) #21 MITF (ENSAMEG00000017117) #22 MDFIC2 (ENSAMEG00000025889) #23 FOXP1 (ENSAMEG00000015051) #24 EIF4E3 (ENSAMEG00000015115) #26 PROK2 (ENSAMEG00000028947) #28 RYBP (ENSAMEG00000015131) #29 ENSAMEG00000015139 SHQ1 (ENSAMEG00000015140) #30 GXYLT2 (ENSAMEG00000015150) #31 PPP4R2 (ENSAMEG00000015164) PDZRN3 (ENSAMEG00000025975) #33 ENSAMEG00000011395 #34 ENSAMEG00000023576 ENSAMEG00000013402 #35 CNTN6 (ENSAMEG00000014259) #36 CNTN4 (ENSAMEG00000014387) #37 Mustelinae ANCESTRAL SPECIES 18 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831.b #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00910000146944 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606.d #36 ENSGT00940000155198.C #37 Ferret MODERN SPECIES 163 MAGI1 (ENSMPUG00000016939) #8 ENSMPUG00000016943 SLC25A26 (ENSMPUG00000016944) #9 LRIG1 (ENSMPUG00000016945) #10 ENSMPUG00000016947 ENSMPUG00000016948 KBTBD8 (ENSMPUG00000016949) #11 SUCLG2 (ENSMPUG00000016950) #12 TAFA4 (ENSMPUG00000016951) #15 EOGT (ENSMPUG00000016952) #16 TMF1 (ENSMPUG00000016957) #17 UBA3 (ENSMPUG00000016958) #18 ARL6IP5 (ENSMPUG00000016965) #19 LMOD3 (ENSMPUG00000016967) #20 FRMD4B (ENSMPUG00000016969) #21 MITF (ENSMPUG00000016972) #22 FOXP1 (ENSMPUG00000017001) #24 EIF4E3 (ENSMPUG00000017002) #26 PROK2 (ENSMPUG00000017003) #28 RYBP (ENSMPUG00000017004) #29 SHQ1 (ENSMPUG00000017006) #30 GXYLT2 (ENSMPUG00000017007) #31 PPP4R2 (ENSMPUG00000017008) PDZRN3 (ENSMPUG00000017009) #33 ENSMPUG00000017010 CNTN3 (ENSMPUG00000017011) #34 ENSMPUG00000020109 ENSMPUG00000017012 CHL1 (ENSMPUG00000017013) #35 ENSMPUG00000020110 CNTN6 (ENSMPUG00000017014) #36 American mink MODERN SPECIES 59 FRMD4B (ENSNVIG00000001725) #21 MITF (ENSNVIG00000001792) #22 MDFIC2 (ENSNVIG00000001956) #23 FOXP1 (ENSNVIG00000001998) #24 ENSNVIG00000002970 EIF4E3 (ENSNVIG00000002988) #26 GPR27 (ENSNVIG00000003017) #27 ENSNVIG00000003023 PROK2 (ENSNVIG00000003030) #28 RYBP (ENSNVIG00000003061) #29 SHQ1 (ENSNVIG00000003089) #30 GXYLT2 (ENSNVIG00000003130) #31 ENSNVIG00000003138 #32 PDZRN3 (ENSNVIG00000003190) #33 CNTN3 (ENSNVIG00000003301) #34 ENSNVIG00000003360 CHL1 (ENSNVIG00000003410) #35 Canidae ANCESTRAL SPECIES ENSGT00940000155820 #8 ENSGT00390000005052.s.a.a.b ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606.d #36 ENSGT00940000155198.C #37 Red fox MODERN SPECIES 5 ENSVVUG00000014685 MAGI1 (ENSVVUG00000014645) #8 ENSVVUG00000014619 SLC25A26 (ENSVVUG00000014581) #9 LRIG1 (ENSVVUG00000014568) #10 KBTBD8 (ENSVVUG00000014553) #11 SUCLG2 (ENSVVUG00000014528) #12 ENSVVUG00000014499 FAM19A4 (ENSVVUG00000014489) #15 EOGT (ENSVVUG00000014456) #16 TMF1 (ENSVVUG00000014445) #17 UBA3 (ENSVVUG00000014100) #18 ARL6IP5 (ENSVVUG00000014070) #19 LMOD3 (ENSVVUG00000014067) #20 FRMD4B (ENSVVUG00000014012) #21 MITF (ENSVVUG00000013975) #22 MDFIC2 (ENSVVUG00000013970) #23 FOXP1 (ENSVVUG00000013954) #24 ENSVVUG00000013952 ENSVVUG00000013947 #26 PROK2 (ENSVVUG00000013944) #28 RYBP (ENSVVUG00000013920) #29 SHQ1 (ENSVVUG00000013906) #30 GXYLT2 (ENSVVUG00000013899) #31 PPP4R2 (ENSVVUG00000013896) ENSVVUG00000013883 ENSVVUG00000013879 #33 CNTN3 (ENSVVUG00000013866) #34 ENSVVUG00000013836 CHL1 (ENSVVUG00000013809) #35 CNTN6 (ENSVVUG00000013018) #36 Canis_lupus ANCESTRAL SPECIES 1 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00390000005052.s.a.a.b ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606.d #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Dingo MODERN SPECIES 401 MAGI1 (ENSCAFG00020011230) #8 ENSCAFG00020011579 SLC25A26 (ENSCAFG00020011583) #9 LRIG1 (ENSCAFG00020011611) #10 KBTBD8 (ENSCAFG00020011839) #11 SUCLG2 (ENSCAFG00020011840) #12 ENSCAFG00020011847 TAFA4 (ENSCAFG00020011851) #15 ENSCAFG00020011853 EOGT (ENSCAFG00020011855) #16 TMF1 (ENSCAFG00020011872) #17 UBA3 (ENSCAFG00020012058) #18 ARL6IP5 (ENSCAFG00020012069) #19 LMOD3 (ENSCAFG00020012071) #20 FRMD4B (ENSCAFG00020012082) #21 MITF (ENSCAFG00020012176) #22 MDFIC2 (ENSCAFG00020012180) #23 FOXP1 (ENSCAFG00020012311) #24 EIF4E3 (ENSCAFG00020016724) #26 GPR27 (ENSCAFG00020016727) #27 PROK2 (ENSCAFG00020016730) #28 RYBP (ENSCAFG00020016734) #29 SHQ1 (ENSCAFG00020016743) #30 PPP4R2 (ENSCAFG00020016753) Dog DUPLICATION Dog MODERN SPECIES 12 PRICKLE2 (ENSCAFG00845013396) ADAMTS9 (ENSCAFG00845012850) MAGI1 (ENSCAFG00845012111) #8 SLC25A26 (ENSCAFG00845011731) #9 LRIG1 (ENSCAFG00845011565) #10 KBTBD8 (ENSCAFG00845011463) #11 SUCLG2 (ENSCAFG00845011161) #12 TAFA1 (ENSCAFG00845011082) #13 TAFA4 (ENSCAFG00845011056) #15 EOGT (ENSCAFG00845010941) #16 TMF1 (ENSCAFG00845010825) #17 UBA3 (ENSCAFG00845010556) #18 ARL6IP5 (ENSCAFG00845010437) #19 LMOD3 (ENSCAFG00845010392) #20 FRMD4B (ENSCAFG00845010033) #21 MITF (ENSCAFG00845009666) #22 MDFIC2 (ENSCAFG00845009570) #23 FOXP1 (ENSCAFG00845008552) #24 ENSCAFG00845007732 #26 GPR27 (ENSCAFG00845007528) #27 PROK2 (ENSCAFG00845007491) #28 ENSCAFG00845007398 #29 SHQ1 (ENSCAFG00845007261) #30 GXYLT2 (ENSCAFG00845007149) #31 PPP4R2 (ENSCAFG00845007022) PDZRN3 (ENSCAFG00845006843) #33 CNTN3 (ENSCAFG00845006575) #34 ENSCAFG00845006474 ENSCAFG00845006445 ENSCAFG00845006097 #35 CNTN6 (ENSCAFG00845005936) #36 Dog MODERN SPECIES 120 ENSCAFG00845022690 ENSCAFG00845022779 ENSCAFG00845022823 ENSCAFG00845022918 ENSCAFG00845023065 ENSCAFG00845023246 ENSCAFG00845023304 ENSCAFG00845023401 ENSCAFG00845023675 ENSCAFG00845023905 ENSCAFG00845024395 ENSCAFG00845024454 ENSCAFG00845024730 ENSCAFG00845025033 #22 Artiodactyla ANCESTRAL SPECIES 2 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT01000000221469 Suina ANCESTRAL SPECIES 1 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT01000000221469 ENSGT00940000155198.C #37 Pig MODERN SPECIES 4 MAGI1 (ENSSSCG00000011497) #8 SLC25A26 (ENSSSCG00000011498) #9 LRIG1 (ENSSSCG00000011499) #10 ENSSSCG00000046980 KBTBD8 (ENSSSCG00000011500) #11 SUCLG2 (ENSSSCG00000011501) #12 TAFA1 (ENSSSCG00000042118) #13 ENSSSCG00000036134 TAFA4 (ENSSSCG00000033199) #15 EOGT (ENSSSCG00000011504) #16 TMF1 (ENSSSCG00000011510) #17 UBA3 (ENSSSCG00000011506) #18 ARL6IP5 (ENSSSCG00000033154) #19 LMOD3 (ENSSSCG00000052599) #20 FRMD4B (ENSSSCG00000011511) #21 MITF (ENSSSCG00000011514) #22 ENSSSCG00000045079 MDFIC2 (ENSSSCG00000060340) #23 FOXP1 (ENSSSCG00000027675) #24 EIF4E3 (ENSSSCG00000011516) #26 GPR27 (ENSSSCG00000036580) #27 PROK2 (ENSSSCG00000026200) #28 RYBP (ENSSSCG00000025053) #29 SHQ1 (ENSSSCG00000011518) #30 GXYLT2 (ENSSSCG00000011519) #31 PPP4R2 (ENSSSCG00000037216) ENSSSCG00000041059 PDZRN3 (ENSSSCG00000011521) #33 ENSSSCG00000047927 ENSSSCG00000051504 ENSSSCG00000047664 Chacoan peccary MODERN SPECIES 950 PRICKLE2 (ENSCWAG00000014815) ADAMTS9 (ENSCWAG00000014975) MAGI1 (ENSCWAG00000015706) #8 SLC25A26 (ENSCWAG00000017276) #9 LRIG1 (ENSCWAG00000017334) #10 KBTBD8 (ENSCWAG00000017384) #11 SUCLG2 (ENSCWAG00000017444) #12 TAFA1 (ENSCWAG00000017513) #13 TAFA4 (ENSCWAG00000017540) #15 EOGT (ENSCWAG00000017579) #16 TMF1 (ENSCWAG00000017660) #17 UBA3 (ENSCWAG00000017763) #18 ARL6IP5 (ENSCWAG00000018288) #19 LMOD3 (ENSCWAG00000018312) #20 FRMD4B (ENSCWAG00000018343) #21 MITF (ENSCWAG00000018514) #22 MDFIC2 (ENSCWAG00000019169) #23 FOXP1 (ENSCWAG00000019255) #24 EIF4E3 (ENSCWAG00000020836) #26 GPR27 (ENSCWAG00000020855) #27 PROK2 (ENSCWAG00000020863) #28 RYBP (ENSCWAG00000020884) #29 SHQ1 (ENSCWAG00000020894) #30 GXYLT2 (ENSCWAG00000020910) #31 PPP4R2 (ENSCWAG00000020926) PDZRN3 (ENSCWAG00000020942) #33 CNTN3 (ENSCWAG00000020972) #34 CHL1 (ENSCWAG00000021043) #35 CNTN6 (ENSCWAG00000021190) #36 ENSCWAG00000021205 CNTN4 (ENSCWAG00000021224) #37 Artiodactyla_a ANCESTRAL SPECIES 18 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT01000000221469 Camelidae ANCESTRAL SPECIES 7 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Arabian camel MODERN SPECIES 8 PRICKLE2 (ENSCDRG00005020751) ADAMTS9 (ENSCDRG00005020777) MAGI1 (ENSCDRG00005020840) #8 SLC25A26 (ENSCDRG00005021013) #9 LRIG1 (ENSCDRG00005021027) #10 KBTBD8 (ENSCDRG00005021054) #11 SUCLG2 (ENSCDRG00005021068) #12 TAFA1 (ENSCDRG00005021082) #13 TAFA4 (ENSCDRG00005021091) #15 EOGT (ENSCDRG00005021103) #16 TMF1 (ENSCDRG00005021118) #17 UBA3 (ENSCDRG00005021145) #18 ARL6IP5 (ENSCDRG00005021188) #19 LMOD3 (ENSCDRG00005003378) #20 FRMD4B (ENSCDRG00005003460) #21 MITF (ENSCDRG00005003570) #22 MDFIC2 (ENSCDRG00005003702) #23 FOXP1 (ENSCDRG00005003812) #24 EIF4E3 (ENSCDRG00005005567) #26 GPR27 (ENSCDRG00005005582) #27 PROK2 (ENSCDRG00005005609) #28 RYBP (ENSCDRG00005005642) #29 SHQ1 (ENSCDRG00005005675) #30 GXYLT2 (ENSCDRG00005005730) #31 PPP4R2 (ENSCDRG00005005747) PDZRN3 (ENSCDRG00005005789) #33 CNTN3 (ENSCDRG00005005902) #34 ENSCDRG00005005931 CHL1 (ENSCDRG00005005966) #35 CNTN6 (ENSCDRG00005006079) #36 ENSCDRG00005006107 Alpaca MODERN SPECIES 1517 TAFA4 (ENSVPAG00000001348) #15 EOGT (ENSVPAG00000001350) #16 TMF1 (ENSVPAG00000001354) #17 UBA3 (ENSVPAG00000001360) #18 ARL6IP5 (ENSVPAG00000001363) #19 LMOD3 (ENSVPAG00000001364) #20 FRMD4B (ENSVPAG00000001367) #21 MITF (ENSVPAG00000001369) #22 ENSVPAG00000001372 Artiodactyla_b ANCESTRAL SPECIES 21 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT01000000221469 Cetacea ANCESTRAL SPECIES 7 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000006922.m.b.a.d ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT01000000221469 Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000006922.m.b.a.d ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00390000012652.ab.a.k ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000006922.m.b.a.d ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00390000012652.ab.a.k ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00390000002517.a.b.b.c.b.a ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000006922.m.b.a.d ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00390000012652.ab.a.k ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000168733 ENSGT00940000160080 #35 Monodontidae ANCESTRAL SPECIES 4 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00390000002517.a.b.b.c.b.a ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000006922.m.b.a.d ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00390000012652.ab.a.k ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000168733 ENSGT00940000160080 #35 Narwhal MODERN SPECIES 310 MAGI1 (ENSMMNG00015018757) #8 SLC25A26 (ENSMMNG00015019127) #9 LRIG1 (ENSMMNG00015019175) #10 ENSMMNG00015019238 KBTBD8 (ENSMMNG00015019270) #11 SUCLG2 (ENSMMNG00015019323) #12 TAFA1 (ENSMMNG00015019401) #13 TAFA4 (ENSMMNG00015019429) #15 ENSMMNG00015019447 EOGT (ENSMMNG00015019482) #16 TMF1 (ENSMMNG00015019536) #17 UBA3 (ENSMMNG00015019640) #18 ARL6IP5 (ENSMMNG00015019913) #19 LMOD3 (ENSMMNG00015019939) #20 FRMD4B (ENSMMNG00015019966) #21 MITF (ENSMMNG00015020021) #22 MDFIC2 (ENSMMNG00015020084) #23 FOXP1 (ENSMMNG00015020256) #24 ENSMMNG00015020607 EIF4E3 (ENSMMNG00015020620) #26 GPR27 (ENSMMNG00015020647) #27 PROK2 (ENSMMNG00015020659) #28 RYBP (ENSMMNG00015020675) #29 ENSMMNG00015020691 SHQ1 (ENSMMNG00015020699) #30 GXYLT2 (ENSMMNG00015020737) #31 PPP4R2 (ENSMMNG00015020763) ENSMMNG00015020797 PDZRN3 (ENSMMNG00015020829) #33 ENSMMNG00015020925 ENSMMNG00015020932 Beluga whale MODERN SPECIES 28 LRIG1 (ENSDLEG00000008041) #10 ENSDLEG00000008026 KBTBD8 (ENSDLEG00000008004) #11 SUCLG2 (ENSDLEG00000007909) #12 ENSDLEG00000007899 ENSDLEG00000007895 ENSDLEG00000007893 TAFA4 (ENSDLEG00000007891) #15 EOGT (ENSDLEG00000007861) #16 TMF1 (ENSDLEG00000007791) #17 UBA3 (ENSDLEG00000007767) #18 ARL6IP5 (ENSDLEG00000007750) #19 LMOD3 (ENSDLEG00000007747) #20 FRMD4B (ENSDLEG00000007734) #21 ENSDLEG00000007725 MITF (ENSDLEG00000007717) #22 MDFIC2 (ENSDLEG00000007714) #23 FOXP1 (ENSDLEG00000007703) #24 EIF4E3 (ENSDLEG00000007693) #26 GPR27 (ENSDLEG00000007689) #27 PROK2 (ENSDLEG00000007684) #28 RYBP (ENSDLEG00000007680) #29 ENSDLEG00000007675 SHQ1 (ENSDLEG00000007662) #30 PPP4R2 (ENSDLEG00000007632) #31 ENSDLEG00000007621 PDZRN3 (ENSDLEG00000007615) #33 ENSDLEG00000007610 CNTN3 (ENSDLEG00000007338) #34 ENSDLEG00000007271 CHL1 (ENSDLEG00000007131) #35 Vaquita MODERN SPECIES 2 ENSPSNG00000013140 KBTBD8 (ENSPSNG00000013050) #11 SUCLG2 (ENSPSNG00000012959) #12 TAFA1 (ENSPSNG00000012870) #13 ENSPSNG00000012855 TAFA4 (ENSPSNG00000012789) #15 EOGT (ENSPSNG00000012709) #16 TMF1 (ENSPSNG00000012619) #17 UBA3 (ENSPSNG00000012433) #18 ARL6IP5 (ENSPSNG00000012328) #19 LMOD3 (ENSPSNG00000012275) #20 ENSPSNG00000012258 FRMD4B (ENSPSNG00000012000) #21 ENSPSNG00000011964 ENSPSNG00000011931 MITF (ENSPSNG00000011317) #22 MDFIC2 (ENSPSNG00000011225) #23 FOXP1 (ENSPSNG00000010176) #24 EIF4E3 (ENSPSNG00000009818) #26 GPR27 (ENSPSNG00000022094) #27 PROK2 (ENSPSNG00000022078) #28 RYBP (ENSPSNG00000022051) #29 ENSPSNG00000022044 SHQ1 (ENSPSNG00000022028) #30 GXYLT2 (ENSPSNG00000022011) #31 PPP4R2 (ENSPSNG00000021989) ENSPSNG00000021970 PDZRN3 (ENSPSNG00000021932) #33 ENSPSNG00000021907 CNTN3 (ENSPSNG00000021869) #34 ENSPSNG00000021840 Dolphin MODERN SPECIES 2440 MITF (ENSTTRG00000007072) #22 ENSTTRG00000007095 Sperm whale MODERN SPECIES 9 MAGI1 (ENSPCTG00005011987) #8 SLC25A26 (ENSPCTG00005011855) #9 LRIG1 (ENSPCTG00005011798) #10 KBTBD8 (ENSPCTG00005011753) #11 ENSPCTG00005011712 SUCLG2 (ENSPCTG00005011614) #12 TAFA1 (ENSPCTG00005011548) #13 TAFA4 (ENSPCTG00005011477) #15 EOGT (ENSPCTG00005011366) #16 TMF1 (ENSPCTG00005010922) #17 UBA3 (ENSPCTG00005010435) #18 ARL6IP5 (ENSPCTG00005010327) #19 LMOD3 (ENSPCTG00005010268) #20 FRMD4B (ENSPCTG00005010026) #21 ENSPCTG00005009977 MITF (ENSPCTG00005009685) #22 MDFIC2 (ENSPCTG00005009636) #23 FOXP1 (ENSPCTG00005009284) #24 EIF4E3 (ENSPCTG00005009184) #26 GPR27 (ENSPCTG00005009164) #27 PROK2 (ENSPCTG00005009087) #28 RYBP (ENSPCTG00005008989) #29 ENSPCTG00005008959 SHQ1 (ENSPCTG00005017281) #30 GXYLT2 (ENSPCTG00005017189) #31 PPP4R2 (ENSPCTG00005017140) ENSPCTG00005017126 ENSPCTG00005017078 PDZRN3 (ENSPCTG00005016884) #33 ENSPCTG00005016762 CNTN3 (ENSPCTG00005016649) #34 Blue whale MODERN SPECIES 2 SLC25A26 (ENSBMSG00010018085) #9 LRIG1 (ENSBMSG00010018168) #10 KBTBD8 (ENSBMSG00010018360) #11 SUCLG2 (ENSBMSG00010018400) #12 TAFA1 (ENSBMSG00010018438) #13 TAFA4 (ENSBMSG00010018478) #15 EOGT (ENSBMSG00010018516) #16 TMF1 (ENSBMSG00010018575) #17 UBA3 (ENSBMSG00010018750) #18 ARL6IP5 (ENSBMSG00010019130) #19 LMOD3 (ENSBMSG00010019153) #20 FRMD4B (ENSBMSG00010019228) #21 ENSBMSG00010019343 ENSBMSG00010019371 ENSBMSG00010019391 MITF (ENSBMSG00010019612) #22 MDFIC2 (ENSBMSG00010020784) #23 ENSBMSG00010020804 FOXP1 (ENSBMSG00010021028) #24 EIF4E3 (ENSBMSG00010021929) #26 GPR27 (ENSBMSG00010021933) #27 PROK2 (ENSBMSG00010021941) #28 RYBP (ENSBMSG00010021945) #29 ENSBMSG00010021950 SHQ1 (ENSBMSG00010021956) #30 GXYLT2 (ENSBMSG00010021967) #31 PPP4R2 (ENSBMSG00010021970) PDZRN3 (ENSBMSG00010021981) #33 ENSBMSG00010021985 ENSBMSG00010021989 CNTN3 (ENSBMSG00010021994) #34 Pecora ANCESTRAL SPECIES 17 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Yarkand deer MODERN SPECIES 16 ENSCHYG00000021268 SLC25A26 (ENSCHYG00000021357) #9 LRIG1 (ENSCHYG00000021539) #10 KBTBD8 (ENSCHYG00000022084) #11 SUCLG2 (ENSCHYG00000022142) #12 TAFA1 (ENSCHYG00000022393) #13 TAFA4 (ENSCHYG00000022432) #15 EOGT (ENSCHYG00000022524) #16 TMF1 (ENSCHYG00000022757) #17 UBA3 (ENSCHYG00000023036) #18 ARL6IP5 (ENSCHYG00000023632) #19 LMOD3 (ENSCHYG00000023655) #20 FRMD4B (ENSCHYG00000023741) #21 ENSCHYG00000024354 ENSCHYG00000024373 MITF (ENSCHYG00000024471) #22 MDFIC2 (ENSCHYG00000024686) #23 ENSCHYG00000024728 FOXP1 (ENSCHYG00000024873) #24 EIF4E3 (ENSCHYG00000026240) #26 PROK2 (ENSCHYG00000026260) #28 RYBP (ENSCHYG00000026283) #29 SHQ1 (ENSCHYG00000026306) #30 GXYLT2 (ENSCHYG00000026357) #31 PPP4R2 (ENSCHYG00000026369) PDZRN3 (ENSCHYG00000026403) #33 CNTN3 (ENSCHYG00000026470) #34 CHL1 (ENSCHYG00000026559) #35 ENSCHYG00000026610 CNTN6 (ENSCHYG00000026622) #36 ENSCHYG00000026685 Percora_a ANCESTRAL SPECIES 19 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Bovidae ANCESTRAL SPECIES 19 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000153886.a.a.k.b.b ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Bovinae ANCESTRAL SPECIES 16 ENSGT00390000006192.nb ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000153886.a.a.k.b.b ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Bos ANCESTRAL SPECIES 16 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.a.a ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000153886.a.a.k.b.b ENSGT00940000156326 #22 ENSGT00390000004856.w.a.a.b.b.a.a ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026.b #28 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.b.a.a.b ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT01100000263481.n.a.a.a.b.a.b.a.b.a.a.b.b.b.b ENSGT00940000160080 #35 Bos_b ANCESTRAL SPECIES 17 ENSGT00940000160625.k.a.b ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.a.a ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000153886.a.a.k.b.b ENSGT00940000156326 #22 ENSGT00390000004856.w.a.a.b.b.a.a ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026.b #28 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.b.a.a.b ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT01100000263481.n.a.a.a.b.a.b.a.b.a.a.b.b.b.b ENSGT00940000160080 #35 Cow MODERN SPECIES 14 ENSBTAG00000051201 LRIG1 (ENSBTAG00000010360) #10 KBTBD8 (ENSBTAG00000011081) #11 SUCLG2 (ENSBTAG00000009541) #12 ENSBTAG00000048492 #13 TAFA1 (ENSBTAG00000019041) #13 ENSBTAG00000049502 TAFA4 (ENSBTAG00000003110) #15 EOGT (ENSBTAG00000022681) #16 TMF1 (ENSBTAG00000015554) #17 UBA3 (ENSBTAG00000015556) #18 ARL6IP5 (ENSBTAG00000021506) #19 LMOD3 (ENSBTAG00000021508) #20 ENSBTAG00000013059 FRMD4B (ENSBTAG00000007624) #21 MITF (ENSBTAG00000006679) #22 ENSBTAG00000009220 MDFIC2 (ENSBTAG00000048900) #23 FOXP1 (ENSBTAG00000016533) #24 EIF4E3 (ENSBTAG00000018862) #26 GPR27 (ENSBTAG00000053030) #27 PROK2 (ENSBTAG00000019330) #28 ENSBTAG00000054670 RYBP (ENSBTAG00000022689) #29 SHQ1 (ENSBTAG00000005436) #30 GXYLT2 (ENSBTAG00000020481) #31 PPP4R2 (ENSBTAG00000002147) PDZRN3 (ENSBTAG00000018644) #33 CNTN3 (ENSBTAG00000007615) #34 CHL1 (ENSBTAG00000002471) #35 ENSBTAG00000006727 Hybrid Bos Indicus MODERN SPECIES 14 LRIG1 (ENSBIXG00005031216) #10 KBTBD8 (ENSBIXG00005031227) #11 SUCLG2 (ENSBIXG00005031233) #12 ENSBIXG00005031245 TAFA1 (ENSBIXG00005031253) #13 TAFA4 (ENSBIXG00005031260) #15 EOGT (ENSBIXG00005031262) #16 TMF1 (ENSBIXG00005031267) #17 UBA3 (ENSBIXG00005031275) #18 ENSBIXG00005031278 ARL6IP5 (ENSBIXG00005031280) #19 LMOD3 (ENSBIXG00005031283) #20 FRMD4B (ENSBIXG00005031293) #21 ENSBIXG00005031301 ENSBIXG00005031303 MITF (ENSBIXG00005031308) #22 ENSBIXG00005031312 MDFIC2 (ENSBIXG00005031313) #23 FOXP1 (ENSBIXG00005031327) #24 EIF4E3 (ENSBIXG00005031340) #26 GPR27 (ENSBIXG00005031343) #27 ENSBIXG00005031346 #28 RYBP (ENSBIXG00005031352) #29 SHQ1 (ENSBIXG00005031362) #30 ENSBIXG00005031363 GXYLT2 (ENSBIXG00005031365) #31 PPP4R2 (ENSBIXG00005031369) PDZRN3 (ENSBIXG00005031380) #33 CNTN3 (ENSBIXG00005031394) #34 ENSBIXG00005031401 CHL1 (ENSBIXG00005031410) #35 Bos_a ANCESTRAL SPECIES 9 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.a.a ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00390000004856.w.a.a.b.b.a.a ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026.b #28 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.b.a.a.b ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT01100000263481.n.a.a.a.b.a.b.a.b.a.a.b.b.b.b Wild yak MODERN SPECIES 359 ENSBMUG00000011209 TAFA4 (ENSBMUG00000011247) #15 EOGT (ENSBMUG00000011307) #16 TMF1 (ENSBMUG00000011382) #17 UBA3 (ENSBMUG00000011407) #18 ARL6IP5 (ENSBMUG00000011430) #19 LMOD3 (ENSBMUG00000011495) #20 FRMD4B (ENSBMUG00000011656) #21 MITF (ENSBMUG00000011747) #22 ENSBMUG00000011775 MDFIC2 (ENSBMUG00000011786) #23 Domestic yak MODERN SPECIES 14 LRIG1 (ENSBGRG00000012866) #10 KBTBD8 (ENSBGRG00000014548) #11 ENSBGRG00000014592 SUCLG2 (ENSBGRG00000014669) #12 TAFA1 (ENSBGRG00000015196) #13 ENSBGRG00000015251 TAFA4 (ENSBGRG00000015297) #15 EOGT (ENSBGRG00000015412) #16 TMF1 (ENSBGRG00000015776) #17 UBA3 (ENSBGRG00000016525) #18 ENSBGRG00000017411 ARL6IP5 (ENSBGRG00000017445) #19 LMOD3 (ENSBGRG00000017594) #20 ENSBGRG00000017643 FRMD4B (ENSBGRG00000017724) #21 MITF (ENSBGRG00000018873) #22 ENSBGRG00000019667 MDFIC2 (ENSBGRG00000019713) #23 FOXP1 (ENSBGRG00000019865) #24 ENSBGRG00000021458 EIF4E3 (ENSBGRG00000021497) #26 GPR27 (ENSBGRG00000021670) #27 PROK2 (ENSBGRG00000021693) #28 ENSBGRG00000021736 RYBP (ENSBGRG00000021759) #29 ENSBGRG00000021805 ENSBGRG00000021818 SHQ1 (ENSBGRG00000021832) #30 GXYLT2 (ENSBGRG00000021905) #31 ENSBGRG00000021987 PPP4R2 (ENSBGRG00000022002) American bison MODERN SPECIES 3333 EOGT (ENSBBBG00000025364) #16 TMF1 (ENSBBBG00000008082) #17 UBA3 (ENSBBBG00000007824) #18 ENSBBBG00000000181 #19 LMOD3 (ENSBBBG00000000194) #20 FRMD4B (ENSBBBG00000006453) #21 ENSBBBG00000006419 MITF (ENSBBBG00000009019) #22 MDFIC2 (ENSBBBG00000006278) #23 FOXP1 (ENSBBBG00000023930) #24 EIF4E3 (ENSBBBG00000023020) #26 PROK2 (ENSBBBG00000022995) #28 RYBP (ENSBBBG00000006031) #29 SHQ1 (ENSBBBG00000006026) #30 GXYLT2 (ENSBBBG00000022931) #31 PPP4R2 (ENSBBBG00000008134) PDZRN3 (ENSBBBG00000022898) #33 CNTN3 (ENSBBBG00000022837) #34 CHL1 (ENSBBBG00000022795) #35 CNTN6 (ENSBBBG00000022607) #36 CNTN4 (ENSBBBG00000022563) #37 IL5RA (ENSBBBG00000008533) Caprinae ANCESTRAL SPECIES 15 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000153886.a.a.k.b.b ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Goat MODERN SPECIES 14 ENSCHIG00000008422 ENSCHIG00000012793 ENSCHIG00000002544 #9 LRIG1 (ENSCHIG00000012710) #10 KBTBD8 (ENSCHIG00000014682) #11 ENSCHIG00000023345 SUCLG2 (ENSCHIG00000019725) #12 TAFA4 (ENSCHIG00000013665) #15 EOGT (ENSCHIG00000014149) #16 TMF1 (ENSCHIG00000012583) #17 UBA3 (ENSCHIG00000015026) #18 ARL6IP5 (ENSCHIG00000021517) #19 LMOD3 (ENSCHIG00000017627) #20 FRMD4B (ENSCHIG00000015488) #21 ENSCHIG00000014889 MITF (ENSCHIG00000022111) #22 MDFIC2 (ENSCHIG00000017880) #23 FOXP1 (ENSCHIG00000017707) #24 EIF4E3 (ENSCHIG00000024333) #26 GPR27 (ENSCHIG00000006038) #27 PROK2 (ENSCHIG00000020872) #28 ENSCHIG00000012364 RYBP (ENSCHIG00000026041) #29 SHQ1 (ENSCHIG00000012271) #30 GXYLT2 (ENSCHIG00000011713) #31 PPP4R2 (ENSCHIG00000006838) PDZRN3 (ENSCHIG00000018984) #33 ENSCHIG00000022511 CNTN3 (ENSCHIG00000015485) #34 CHL1 (ENSCHIG00000015409) #35 CNTN6 (ENSCHIG00000024913) #36 Rambouillet Sheep MODERN SPECIES 10 ADAMTS9 (ENSOARG00020024236) MAGI1 (ENSOARG00020023373) #8 SLC25A26 (ENSOARG00020023224) #9 LRIG1 (ENSOARG00020023098) #10 KBTBD8 (ENSOARG00020023050) #11 ENSOARG00020023030 SUCLG2 (ENSOARG00020022864) #12 TAFA1 (ENSOARG00020022813) #13 EOGT (ENSOARG00020022578) #16 TMF1 (ENSOARG00020022407) #17 UBA3 (ENSOARG00020021782) #18 ARL6IP5 (ENSOARG00020021679) #19 LMOD3 (ENSOARG00020021653) #20 ENSOARG00020021609 FRMD4B (ENSOARG00020021286) #21 MITF (ENSOARG00020020821) #22 MDFIC2 (ENSOARG00020020710) #23 FOXP1 (ENSOARG00020017991) #24 GPR27 (ENSOARG00020017874) #27 PROK2 (ENSOARG00020017771) #28 RYBP (ENSOARG00020017720) #29 SHQ1 (ENSOARG00020017477) #30 GXYLT2 (ENSOARG00020017381) #31 PPP4R2 (ENSOARG00020017177) PDZRN3 (ENSOARG00020016919) #33 CNTN3 (ENSOARG00020016622) #34 CHL1 (ENSOARG00020015831) #35 CNTN6 (ENSOARG00020015543) #36 ENSOARG00020015490 CNTN4 (ENSOARG00020015064) #37 TRNT1 (ENSOARG00020014826) Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 1222 MAGI1 (ENSMMSG00000020250) #8 SLC25A26 (ENSMMSG00000021168) #9 LRIG1 (ENSMMSG00000021235) #10 ENSMMSG00000021329 KBTBD8 (ENSMMSG00000021352) #11 ENSMMSG00000021399 SUCLG2 (ENSMMSG00000021420) #12 TAFA1 (ENSMMSG00000021464) #13 TAFA4 (ENSMMSG00000021498) #15 EOGT (ENSMMSG00000021538) #16 TMF1 (ENSMMSG00000013641) #17 UBA3 (ENSMMSG00000013729) #18 ARL6IP5 (ENSMMSG00000013836) #19 LMOD3 (ENSMMSG00000013861) #20 FRMD4B (ENSMMSG00000013878) #21 MITF (ENSMMSG00000013971) #22 MDFIC2 (ENSMMSG00000014534) #23 FOXP1 (ENSMMSG00000014620) #24 EIF4E3 (ENSMMSG00000015972) #26 GPR27 (ENSMMSG00000016039) #27 PROK2 (ENSMMSG00000016060) #28 RYBP (ENSMMSG00000016107) #29 SHQ1 (ENSMMSG00000016133) #30 GXYLT2 (ENSMMSG00000016163) #31 PPP4R2 (ENSMMSG00000016216) PDZRN3 (ENSMMSG00000016262) #33 CNTN3 (ENSMMSG00000016378) #34 ENSMMSG00000016517 CHL1 (ENSMMSG00000016568) #35 Siberian musk deer MODERN SPECIES 21 ENSMMSG00000002412 #22 ENSMMSG00000002427 ZPLD1 (ENSMMSG00000002438) ENSMMSG00000002489 ENSMMSG00000002507 ENSMMSG00000002526 NFKBIZ (ENSMMSG00000002549) NXPE3 (ENSMMSG00000002592) ENSMMSG00000002610 CEP97 (ENSMMSG00000002625) RPL24 (ENSMMSG00000002654) ZBTB11 (ENSMMSG00000002682) PCNP (ENSMMSG00000002707) TRMT10C (ENSMMSG00000002724) ENSMMSG00000002729 SENP7 (ENSMMSG00000002791) Atlantogenata ANCESTRAL SPECIES 34 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Xenarthra ANCESTRAL SPECIES 1224 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 Sloth MODERN SPECIES 6936 MITF (ENSCHOG00000011031) #22 Armadillo MODERN SPECIES 4378 ENSDNOG00000039826 MITF (ENSDNOG00000037006) #22 MDFIC2 (ENSDNOG00000039995) #23 FOXP1 (ENSDNOG00000019347) #24 ENSDNOG00000045707 EIF4E3 (ENSDNOG00000039475) #26 Afrotheria ANCESTRAL SPECIES 32 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 ENSGT00390000009678 Afrotheria_a ANCESTRAL SPECIES 32 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 ENSGT00390000009678 Elephant MODERN SPECIES 49 ENSLAFG00000014523 ENSLAFG00000029554 ENSLAFG00000027480 ENSLAFG00000007076 SLC25A26 (ENSLAFG00000013666) #9 ENSLAFG00000013671 #10 KBTBD8 (ENSLAFG00000002923) #11 SUCLG2 (ENSLAFG00000015283) #12 TAFA4 (ENSLAFG00000004079) #15 EOGT (ENSLAFG00000004080) #16 TMF1 (ENSLAFG00000004084) #17 UBA3 (ENSLAFG00000004088) #18 ARL6IP5 (ENSLAFG00000004092) #19 LMOD3 (ENSLAFG00000032473) #20 FRMD4B (ENSLAFG00000001441) #21 MITF (ENSLAFG00000023153) #22 FOXP1 (ENSLAFG00000008006) #24 EIF4E3 (ENSLAFG00000001998) #26 GPR27 (ENSLAFG00000015911) #27 RYBP (ENSLAFG00000003133) #29 ENSLAFG00000017601 #30 GXYLT2 (ENSLAFG00000017357) #31 PPP4R2 (ENSLAFG00000000513) PDZRN3 (ENSLAFG00000014734) #33 ENSLAFG00000026536 ENSLAFG00000031602 CNTN3 (ENSLAFG00000008082) #34 CHL1 (ENSLAFG00000000179) #35 CNTN6 (ENSLAFG00000008927) #36 CNTN4 (ENSLAFG00000011631) #37 IL5RA (ENSLAFG00000011644) Hyrax MODERN SPECIES 6525 MITF (ENSPCAG00000016594) #22 Tenrec MODERN SPECIES 7758 MITF (ENSETEG00000017856) #22 Marsupialia ANCESTRAL SPECIES 14 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Marsupialia_b ANCESTRAL SPECIES 14 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Diprotodontia ANCESTRAL SPECIES 12 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Wallaby MODERN SPECIES 9343 MITF (ENSMEUG00000000099) #22 ENSMEUG00000000104 Diprotodontia_a ANCESTRAL SPECIES 10 ENSGT00940000153629.a.a ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00940000160890 Common wonbat MODERN SPECIES 1012 MAGI1 (ENSVURG00010006288) #8 ENSVURG00010006497 SLC25A26 (ENSVURG00010006536) #9 LRIG1 (ENSVURG00010006601) #10 KBTBD8 (ENSVURG00010007548) #11 SUCLG2 (ENSVURG00010007574) #12 ENSVURG00010007597 TAFA1 (ENSVURG00010007612) #13 TAFA4 (ENSVURG00010007643) #15 EOGT (ENSVURG00010007661) #16 TMF1 (ENSVURG00010007723) #17 UBA3 (ENSVURG00010007758) #18 ARL6IP5 (ENSVURG00010007801) #19 LMOD3 (ENSVURG00010007809) #20 FRMD4B (ENSVURG00010007860) #21 MITF (ENSVURG00010007937) #22 MDFIC2 (ENSVURG00010008101) #23 FOXP1 (ENSVURG00010008144) #24 EIF4E3 (ENSVURG00010008277) #26 ENSVURG00010008289 ENSVURG00010008299 PROK2 (ENSVURG00010008305) #28 RYBP (ENSVURG00010008342) #29 SHQ1 (ENSVURG00010008402) #30 ENSVURG00010008413 GXYLT2 (ENSVURG00010008424) #31 PPP4R2 (ENSVURG00010008448) ENSVURG00010008462 PDZRN3 (ENSVURG00010008505) #33 ENSVURG00010008548 CNTN3 (ENSVURG00010008586) #34 koala MODERN SPECIES 122 KBTBD8 (ENSPCIG00000017120) #11 SUCLG2 (ENSPCIG00000017113) #12 ENSPCIG00000009129 ENSPCIG00000036876 ENSPCIG00000035890 TAFA4 (ENSPCIG00000009587) #15 EOGT (ENSPCIG00000010307) #16 TMF1 (ENSPCIG00000010308) #17 UBA3 (ENSPCIG00000010311) #18 ARL6IP5 (ENSPCIG00000011806) #19 LMOD3 (ENSPCIG00000011808) #20 FRMD4B (ENSPCIG00000011810) #21 MITF (ENSPCIG00000011814) #22 MDFIC2 (ENSPCIG00000011815) #23 FOXP1 (ENSPCIG00000011818) #24 EIF4E3 (ENSPCIG00000011825) #26 GPR27 (ENSPCIG00000007179) #27 ENSPCIG00000007180 PROK2 (ENSPCIG00000035580) #28 RYBP (ENSPCIG00000035828) #29 SHQ1 (ENSPCIG00000033419) #30 GXYLT2 (ENSPCIG00000003536) #31 PPP4R2 (ENSPCIG00000003553) PDZRN3 (ENSPCIG00000003575) #33 CNTN3 (ENSPCIG00000019536) #34 Tasmanian devil MODERN SPECIES PRICKLE2 (ENSSHAG00000013056) ADAMTS9 (ENSSHAG00000014822) MAGI1 (ENSSHAG00000017371) #8 SLC25A26 (ENSSHAG00000024838) #9 LRIG1 (ENSSHAG00000011408) #10 KBTBD8 (ENSSHAG00000032152) #11 SUCLG2 (ENSSHAG00000029903) #12 ENSSHAG00000025563 TAFA4 (ENSSHAG00000024690) #15 EOGT (ENSSHAG00000016174) #16 UBA3 (ENSSHAG00000016367) #18 TMF1 (ENSSHAG00000016301) #17 ARL6IP5 (ENSSHAG00000029654) #19 LMOD3 (ENSSHAG00000016539) #20 FRMD4B (ENSSHAG00000013729) #21 MITF (ENSSHAG00000017522) #22 MDFIC2 (ENSSHAG00000030086) #23 FOXP1 (ENSSHAG00000026979) #24 EIF4E3 (ENSSHAG00000008775) #26 GPR27 (ENSSHAG00000022511) #27 ENSSHAG00000031144 #28 ENSSHAG00000013359 #29 SHQ1 (ENSSHAG00000015077) #30 GXYLT2 (ENSSHAG00000015594) #31 PPP4R2 (ENSSHAG00000015837) PDZRN3 (ENSSHAG00000016709) #33 ENSSHAG00000010121 #34 ENSSHAG00000010125 #35 CNTN6 (ENSSHAG00000015764) #36 CNTN4 (ENSSHAG00000018520) #37 IL5RA (ENSSHAG00000018837) Opossum MODERN SPECIES 5 ENSMODG00000027350 ENSMODG00000051446 ENSMODG00000038114 SLC25A26 (ENSMODG00000003248) #9 LRIG1 (ENSMODG00000003264) #10 KBTBD8 (ENSMODG00000003276) #11 SUCLG2 (ENSMODG00000003294) #12 ENSMODG00000003405 TAFA4 (ENSMODG00000029617) #15 ENSMODG00000003450 #16 TMF1 (ENSMODG00000003468) #17 UBA3 (ENSMODG00000003622) #18 ARL6IP5 (ENSMODG00000049779) #19 LMOD3 (ENSMODG00000003639) #20 FRMD4B (ENSMODG00000003688) #21 MITF (ENSMODG00000003754) #22 ENSMODG00000039201 ENSMODG00000028024 MDFIC2 (ENSMODG00000028056) #23 ENSMODG00000027781 FOXP1 (ENSMODG00000003884) #24 EIF4E3 (ENSMODG00000003899) #26 GPR27 (ENSMODG00000003902) #27 PROK2 (ENSMODG00000043726) #28 RYBP (ENSMODG00000038209) #29 SHQ1 (ENSMODG00000003926) #30 GXYLT2 (ENSMODG00000003929) #31 PPP4R2 (ENSMODG00000003940) PDZRN3 (ENSMODG00000003959) #33 CNTN3 (ENSMODG00000003991) #34 ENSMODG00000049888 Platypus MODERN SPECIES 84 PRICKLE2 (ENSOANG00000011930) ADAMTS9 (ENSOANG00000002273) MAGI1 (ENSOANG00000030734) #8 SLC25A26 (ENSOANG00000021347) #9 ENSOANG00000012850 LRIG1 (ENSOANG00000012379) #10 KBTBD8 (ENSOANG00000005913) #11 SUCLG2 (ENSOANG00000001375) #12 ENSOANG00000011749 TAFA4 (ENSOANG00000049725) #15 EOGT (ENSOANG00000000498) #16 TMF1 (ENSOANG00000000495) #17 UBA3 (ENSOANG00000000489) #18 ARL6IP5 (ENSOANG00000000488) #19 FRMD4B (ENSOANG00000000486) #21 MITF (ENSOANG00000012406) #22 MDFIC2 (ENSOANG00000051152) #23 FOXP1 (ENSOANG00000013093) #24 ENSOANG00000013094 #26 GPR27 (ENSOANG00000005763) #27 ENSOANG00000050666 #28 ENSOANG00000050965 ENSOANG00000037173 ENSOANG00000046070 ENSOANG00000041052 SPATA5L1 (ENSOANG00000006987) RASGRF1 (ENSOANG00000042096) CTSH (ENSOANG00000040239) BLM (ENSOANG00000009316) FURIN (ENSOANG00000047447) FES (ENSOANG00000046391) Sauria ANCESTRAL SPECIES 13 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 Archelosauria ANCESTRAL SPECIES 17 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00530000063647.A.a.d Archosauria ANCESTRAL SPECIES 24 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 Aves ANCESTRAL SPECIES 29 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 Neognathae ANCESTRAL SPECIES 27 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 Neognathae_b ANCESTRAL SPECIES 18 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 Passeriformes ANCESTRAL SPECIES 16 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 Great tit MODERN SPECIES 3 ADAMTS9 (ENSPMJG00000005116) MAGI1 (ENSPMJG00000005138) #8 SLC25A26 (ENSPMJG00000005179) #9 LRIG1 (ENSPMJG00000005189) #10 KBTBD8 (ENSPMJG00000005200) #11 ENSPMJG00000005202 SUCLG2 (ENSPMJG00000005212) #12 TAFA1 (ENSPMJG00000005221) #13 TAFA4 (ENSPMJG00000005234) #15 EOGT (ENSPMJG00000005244) #16 TMF1 (ENSPMJG00000005253) #17 UBA3 (ENSPMJG00000005263) #18 ARL6IP5 (ENSPMJG00000005544) #19 LMOD3 (ENSPMJG00000005547) #20 FRMD4B (ENSPMJG00000005549) #21 MITF (ENSPMJG00000005557) #22 ENSPMJG00000005560 MDFIC2 (ENSPMJG00000005566) #23 FOXP1 (ENSPMJG00000005573) #24 EIF4E3 (ENSPMJG00000005596) #26 GPR27 (ENSPMJG00000005597) #27 PROK2 (ENSPMJG00000005599) #28 RYBP (ENSPMJG00000005603) #29 SHQ1 (ENSPMJG00000005611) #30 GXYLT2 (ENSPMJG00000005617) #31 ENSPMJG00000005654 #32 PDZRN3 (ENSPMJG00000005657) #33 ENSPMJG00000005665 CNTN3 (ENSPMJG00000005671) #34 CHL1 (ENSPMJG00000005688) #35 CNTN6 (ENSPMJG00000005736) #36 Passeriformes_d ANCESTRAL SPECIES 16 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 Flycatcher MODERN SPECIES 3 MAGI1 (ENSFALG00000013283) #8 ENSFALG00000023566 SLC25A26 (ENSFALG00000013315) #9 LRIG1 (ENSFALG00000013324) #10 KBTBD8 (ENSFALG00000013332) #11 ENSFALG00000013341 SUCLG2 (ENSFALG00000013349) #12 TAFA1 (ENSFALG00000013355) #13 TAFA4 (ENSFALG00000013356) #15 EOGT (ENSFALG00000026269) #16 TMF1 (ENSFALG00000013361) #17 UBA3 (ENSFALG00000013365) #18 ARL6IP5 (ENSFALG00000028538) #19 LMOD3 (ENSFALG00000013370) #20 FRMD4B (ENSFALG00000013372) #21 MITF (ENSFALG00000026731) #22 ENSFALG00000013396 MDFIC2 (ENSFALG00000013397) #23 FOXP1 (ENSFALG00000013404) #24 EIF4E3 (ENSFALG00000028480) #26 GPR27 (ENSFALG00000014506) #27 PROK2 (ENSFALG00000013423) #28 RYBP (ENSFALG00000027888) #29 SHQ1 (ENSFALG00000013428) #30 GXYLT2 (ENSFALG00000024120) #31 PPP4R2 (ENSFALG00000013436) PDZRN3 (ENSFALG00000013445) #33 ENSFALG00000027072 CNTN3 (ENSFALG00000013457) #34 CHL1 (ENSFALG00000013463) #35 CNTN6 (ENSFALG00000013472) #36 Passeriformes_g ANCESTRAL SPECIES 16 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C.l #37 Passeroidea ANCESTRAL SPECIES 16 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 Common canary MODERN SPECIES 15 ADAMTS9 (ENSSCAG00000007307) MAGI1 (ENSSCAG00000007368) #8 SLC25A26 (ENSSCAG00000007630) #9 LRIG1 (ENSSCAG00000007642) #10 KBTBD8 (ENSSCAG00000007691) #11 ENSSCAG00000007694 SUCLG2 (ENSSCAG00000007715) #12 TAFA1 (ENSSCAG00000007834) #13 TAFA4 (ENSSCAG00000007848) #15 EOGT (ENSSCAG00000007882) #16 TMF1 (ENSSCAG00000007954) #17 UBA3 (ENSSCAG00000007959) #18 ARL6IP5 (ENSSCAG00000007962) #19 LMOD3 (ENSSCAG00000007965) #20 FRMD4B (ENSSCAG00000007970) #21 MITF (ENSSCAG00000008001) #22 ENSSCAG00000008018 ENSSCAG00000008022 MDFIC2 (ENSSCAG00000008028) #23 FOXP1 (ENSSCAG00000008063) #24 EIF4E3 (ENSSCAG00000008083) #26 GPR27 (ENSSCAG00000008093) #27 PROK2 (ENSSCAG00000008100) #28 RYBP (ENSSCAG00000008108) #29 SHQ1 (ENSSCAG00000008114) #30 GXYLT2 (ENSSCAG00000008125) #31 PPP4R2 (ENSSCAG00000008132) PDZRN3 (ENSSCAG00000008162) #33 CNTN3 (ENSSCAG00000008226) #34 CHL1 (ENSSCAG00000008249) #35 Zebra finch MODERN SPECIES 3 ADAMTS9 (ENSTGUG00000009483) MAGI1 (ENSTGUG00000009560) #8 SLC25A26 (ENSTGUG00000009590) #9 LRIG1 (ENSTGUG00000009604) #10 KBTBD8 (ENSTGUG00000009627) #11 ENSTGUG00000009630 SUCLG2 (ENSTGUG00000009643) #12 TAFA1 (ENSTGUG00000009669) #13 TAFA4 (ENSTGUG00000024581) #15 EOGT (ENSTGUG00000009683) #16 TMF1 (ENSTGUG00000009717) #17 UBA3 (ENSTGUG00000009733) #18 ARL6IP5 (ENSTGUG00000009784) #19 LMOD3 (ENSTGUG00000009788) #20 FRMD4B (ENSTGUG00000009791) #21 MITF (ENSTGUG00000009847) #22 ENSTGUG00000009864 MDFIC2 (ENSTGUG00000022276) #23 FOXP1 (ENSTGUG00000009872) #24 EIF4E3 (ENSTGUG00000009923) #26 GPR27 (ENSTGUG00000009928) #27 PROK2 (ENSTGUG00000026872) #28 RYBP (ENSTGUG00000020831) #29 SHQ1 (ENSTGUG00000009933) #30 ENSTGUG00000009943 #32 PDZRN3 (ENSTGUG00000014523) #33 CNTN3 (ENSTGUG00000009960) #34 CHL1 (ENSTGUG00000009997) #35 CNTN6 (ENSTGUG00000010053) #36 CNTN4 (ENSTGUG00000010102) #37 IL5RA (ENSTGUG00000010171) Medium ground finch MODERN SPECIES 20 ADAMTS9 (ENSGFOG00000005699) MAGI1 (ENSGFOG00000005601) #8 SLC25A26 (ENSGFOG00000005568) #9 LRIG1 (ENSGFOG00000005456) #10 KBTBD8 (ENSGFOG00000005432) #11 ENSGFOG00000005424 SUCLG2 (ENSGFOG00000005343) #12 TAFA1 (ENSGFOG00000005327) #13 TAFA4 (ENSGFOG00000005317) #15 EOGT (ENSGFOG00000005298) #16 TMF1 (ENSGFOG00000004844) #17 UBA3 (ENSGFOG00000004801) #18 ARL6IP5 (ENSGFOG00000004791) #19 LMOD3 (ENSGFOG00000004784) #20 FRMD4B (ENSGFOG00000004734) #21 MITF (ENSGFOG00000004714) #22 ENSGFOG00000004688 ENSGFOG00000004645 MDFIC2 (ENSGFOG00000004631) #23 FOXP1 (ENSGFOG00000004570) #24 EIF4E3 (ENSGFOG00000004543) #26 GPR27 (ENSGFOG00000004530) #27 PROK2 (ENSGFOG00000004519) #28 ENSGFOG00000004504 RYBP (ENSGFOG00000004492) #29 SHQ1 (ENSGFOG00000004475) #30 GXYLT2 (ENSGFOG00000004458) #31 PPP4R2 (ENSGFOG00000004433) PDZRN3 (ENSGFOG00000004417) #33 CNTN3 (ENSGFOG00000004387) #34 CHL1 (ENSGFOG00000004348) #35 Neognathae_c ANCESTRAL SPECIES 21 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Golden eagle MODERN SPECIES 12 ADAMTS9 (ENSACCG00020016650) MAGI1 (ENSACCG00020016667) #8 SLC25A26 (ENSACCG00020016695) #9 LRIG1 (ENSACCG00020016703) #10 KBTBD8 (ENSACCG00020016709) #11 ENSACCG00020016712 SUCLG2 (ENSACCG00020008064) #12 TAFA1 (ENSACCG00020008077) #13 TAFA4 (ENSACCG00020008089) #15 EOGT (ENSACCG00020008102) #16 TMF1 (ENSACCG00020008119) #17 UBA3 (ENSACCG00020008140) #18 ARL6IP5 (ENSACCG00020008195) #19 LMOD3 (ENSACCG00020008206) #20 FRMD4B (ENSACCG00020008222) #21 MITF (ENSACCG00020008257) #22 MDFIC2 (ENSACCG00020008280) #23 FOXP1 (ENSACCG00020008422) #24 EIF4E3 (ENSACCG00020008519) #26 GPR27 (ENSACCG00020008536) #27 PROK2 (ENSACCG00020008544) #28 RYBP (ENSACCG00020008553) #29 SHQ1 (ENSACCG00020008571) #30 GXYLT2 (ENSACCG00020008596) #31 PPP4R2 (ENSACCG00020008614) PDZRN3 (ENSACCG00020008644) #33 CNTN3 (ENSACCG00020008678) #34 CHL1 (ENSACCG00020009287) #35 CNTN6 (ENSACCG00020009592) #36 CNTN4 (ENSACCG00020009634) #37 ENSACCG00020009645 Galloanserae ANCESTRAL SPECIES 26 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 Phasianidae ANCESTRAL SPECIES 16 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 Japanese quail MODERN SPECIES 3 MAGI1 (ENSCJPG00005018045) #8 SLC25A26 (ENSCJPG00005018055) #9 LRIG1 (ENSCJPG00005018060) #10 KBTBD8 (ENSCJPG00005018067) #11 ENSCJPG00005018069 SUCLG2 (ENSCJPG00005018075) #12 ENSCJPG00005018085 ENSCJPG00005018090 TAFA4 (ENSCJPG00005018097) #15 EOGT (ENSCJPG00005018101) #16 TMF1 (ENSCJPG00005018103) #17 UBA3 (ENSCJPG00005018109) #18 ARL6IP5 (ENSCJPG00005018138) #19 LMOD3 (ENSCJPG00005018140) #20 FRMD4B (ENSCJPG00005018142) #21 MITF (ENSCJPG00005018152) #22 ENSCJPG00005018160 ENSCJPG00005018162 MDFIC2 (ENSCJPG00005018163) #23 FOXP1 (ENSCJPG00005018169) #24 EIF4E3 (ENSCJPG00005018652) #26 ENSCJPG00005018653 GPR27 (ENSCJPG00005018654) #27 PROK2 (ENSCJPG00005018655) #28 RYBP (ENSCJPG00005018659) #29 SHQ1 (ENSCJPG00005018660) #30 GXYLT2 (ENSCJPG00005018661) #31 ENSCJPG00005018662 #32 PDZRN3 (ENSCJPG00005018664) #33 CNTN3 (ENSCJPG00005018668) #34 CHL1 (ENSCJPG00005018669) #35 Phasianidae_b ANCESTRAL SPECIES 16 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000165570 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 Chicken MODERN SPECIES 3 ADAMTS9 (ENSGALG00010020246) MAGI1 (ENSGALG00010020282) #8 SLC25A26 (ENSGALG00010019297) #9 LRIG1 (ENSGALG00010019323) #10 KBTBD8 (ENSGALG00010019650) #11 ENSGALG00010019696 SUCLG2 (ENSGALG00010019767) #12 TAFA1 (ENSGALG00010019871) #13 TAFA4 (ENSGALG00010019938) #15 EOGT (ENSGALG00010020005) #16 TMF1 (ENSGALG00010020036) #17 UBA3 (ENSGALG00010020061) #18 ARL6IP5 (ENSGALG00010020070) #19 LMOD3 (ENSGALG00010020088) #20 FRMD4B (ENSGALG00010020127) #21 MITF (ENSGALG00010022062) #22 ENSGALG00010022077 MDFIC2 (ENSGALG00010022083) #23 FOXP1 (ENSGALG00010022171) #24 EIF4E3 (ENSGALG00010022219) #26 GPR173 (ENSGALG00010022232) #27 PROK2 (ENSGALG00010019225) #28 RYBP (ENSGALG00010018991) #29 SHQ1 (ENSGALG00010020307) #30 GXYLT2 (ENSGALG00010020309) #31 PPP4R2 (ENSGALG00010020329) PDZRN3 (ENSGALG00010020350) #33 ENSGALG00010020359 CNTN3 (ENSGALG00010020369) #34 CHL1 (ENSGALG00010020396) #35 CNTN6 (ENSGALG00010020425) #36 Turkey MODERN SPECIES 5 ADAMTS9 (ENSMGAG00000009150) MAGI1 (ENSMGAG00000009228) #8 SLC25A26 (ENSMGAG00000009255) #9 LRIG1 (ENSMGAG00000009269) #10 KBTBD8 (ENSMGAG00000022009) #11 ENSMGAG00000009302 SUCLG2 (ENSMGAG00000009310) #12 ENSMGAG00000009329 TAFA4 (ENSMGAG00000009332) #15 EOGT (ENSMGAG00000009335) #16 TMF1 (ENSMGAG00000009372) #17 UBA3 (ENSMGAG00000009393) #18 ARL6IP5 (ENSMGAG00000009453) #19 LMOD3 (ENSMGAG00000009459) #20 FRMD4B (ENSMGAG00000009466) #21 MITF (ENSMGAG00000009507) #22 ENSMGAG00000009539 MDFIC2 (ENSMGAG00000009545) #23 FOXP1 (ENSMGAG00000009549) #24 EIF4E3 (ENSMGAG00000009619) #26 GPR27 (ENSMGAG00000009633) #27 PROK2 (ENSMGAG00000002367) #28 RYBP (ENSMGAG00000009639) #29 SHQ1 (ENSMGAG00000009640) #30 PPP4R2 (ENSMGAG00000009674) GXYLT2 (ENSMGAG00000009655) #31 ENSMGAG00000018290 PDZRN3 (ENSMGAG00000009691) #33 ENSMGAG00000017393 ENSMGAG00000021720 ENSMGAG00000009709 #34 Anatidae ANCESTRAL SPECIES 41 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 Pink-footed goose MODERN SPECIES 49 SUCLG2 (ENSABRG00000017550) #12 ENSABRG00000017534 TAFA4 (ENSABRG00000017510) #15 EOGT (ENSABRG00000017437) #16 TMF1 (ENSABRG00000017367) #17 UBA3 (ENSABRG00000016957) #18 ARL6IP5 (ENSABRG00000016899) #19 LMOD3 (ENSABRG00000016894) #20 FRMD4B (ENSABRG00000016861) #21 MITF (ENSABRG00000016841) #22 ENSABRG00000016826 MDFIC2 (ENSABRG00000016818) #23 FOXP1 (ENSABRG00000016798) #24 EIF4E3 (ENSABRG00000016790) #26 GPR27 (ENSABRG00000016783) #27 PROK2 (ENSABRG00000016781) #28 RYBP (ENSABRG00000016768) #29 SHQ1 (ENSABRG00000016761) #30 GXYLT2 (ENSABRG00000016756) #31 PPP4R2 (ENSABRG00000016753) PDZRN3 (ENSABRG00000016746) #33 CNTN3 (ENSABRG00000016737) #34 CHL1 (ENSABRG00000016703) #35 CNTN6 (ENSABRG00000015653) #36 CNTN4 (ENSABRG00000014569) #37 Duck MODERN SPECIES 4 ENSAPLG00000027785 MAGI1 (ENSAPLG00000015151) #8 SLC25A26 (ENSAPLG00000015089) #9 LRIG1 (ENSAPLG00000014836) #10 KBTBD8 (ENSAPLG00000014724) #11 ENSAPLG00000014560 SUCLG2 (ENSAPLG00000014378) #12 ENSAPLG00000014295 TAFA4 (ENSAPLG00000014143) #15 EOGT (ENSAPLG00000013712) #16 TMF1 (ENSAPLG00000013459) #17 UBA3 (ENSAPLG00000013254) #18 ARL6IP5 (ENSAPLG00000017744) #19 LMOD3 (ENSAPLG00000013202) #20 FRMD4B (ENSAPLG00000012468) #21 MITF (ENSAPLG00000011965) #22 ENSAPLG00000011893 MDFIC2 (ENSAPLG00000023736) #23 FOXP1 (ENSAPLG00000011828) #24 EIF4E3 (ENSAPLG00000023114) #26 GPR27 (ENSAPLG00000011697) #27 PROK2 (ENSAPLG00000011432) #28 RYBP (ENSAPLG00000013882) #29 SHQ1 (ENSAPLG00000013926) #30 GXYLT2 (ENSAPLG00000013945) #31 PPP4R2 (ENSAPLG00000014045) PDZRN3 (ENSAPLG00000014073) #33 CNTN3 (ENSAPLG00000009693) #34 CHL1 (ENSAPLG00000007000) #35 CNTN6 (ENSAPLG00000005639) #36 CNTN4 (ENSAPLG00000004320) #37 African ostrich MODERN SPECIES 440 MITF (ENSSCUG00000010402) #22 ENSSCUG00000010398 MDFIC2 (ENSSCUG00000010396) #23 FOXP1 (ENSSCUG00000010389) #24 Australian saltwater crocodile MODERN SPECIES 37 ENSCPRG00005015898 SLC25A26 (ENSCPRG00005015895) #9 LRIG1 (ENSCPRG00005015894) #10 KBTBD8 (ENSCPRG00005015890) #11 ENSCPRG00005015888 SUCLG2 (ENSCPRG00005015887) #12 ENSCPRG00005015885 ENSCPRG00005015882 TAFA4 (ENSCPRG00005015878) #15 EOGT (ENSCPRG00005015876) #16 TMF1 (ENSCPRG00005015874) #17 UBA3 (ENSCPRG00005015868) #18 ARL6IP5 (ENSCPRG00005015865) #19 LMOD3 (ENSCPRG00005015864) #20 FRMD4B (ENSCPRG00005015846) #21 MITF (ENSCPRG00005015838) #22 MDFIC2 (ENSCPRG00005015832) #23 FOXP1 (ENSCPRG00005015769) #24 EIF4E3 (ENSCPRG00005015751) #26 GPR27 (ENSCPRG00005015748) #27 PROK2 (ENSCPRG00005015745) #28 RYBP (ENSCPRG00005015740) #29 ENSCPRG00005015737 #30 GXYLT2 (ENSCPRG00005015736) #31 PPP4R2 (ENSCPRG00005015732) PDZRN3 (ENSCPRG00005015721) #33 CNTN3 (ENSCPRG00005015706) #34 ENSCPRG00005015700 CHL1 (ENSCPRG00005015694) #35 CNTN6 (ENSCPRG00005015511) #36 ENSCPRG00005015470 Cryptodira ANCESTRAL SPECIES 17 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 Emydidae ANCESTRAL SPECIES 13 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 painted turtle MODERN SPECIES 2383 SLC25A26 (ENSCPBG00000026877) #9 LRIG1 (ENSCPBG00000026879) #10 KBTBD8 (ENSCPBG00000026884) #11 ENSCPBG00000026885 SUCLG2 (ENSCPBG00000026891) #12 ENSCPBG00000026898 ENSCPBG00000026901 ENSCPBG00000000182 TAFA4 (ENSCPBG00000000202) #15 EOGT (ENSCPBG00000000226) #16 TMF1 (ENSCPBG00000000268) #17 UBA3 (ENSCPBG00000000357) #18 ARL6IP5 (ENSCPBG00000000384) #19 LMOD3 (ENSCPBG00000000394) #20 FRMD4B (ENSCPBG00000000426) #21 MITF (ENSCPBG00000000513) #22 ENSCPBG00000000573 ENSCPBG00000000607 MDFIC2 (ENSCPBG00000000641) #23 FOXP1 (ENSCPBG00000000850) #24 C3orf80 (ENSCPBG00000005344) ENSCPBG00000005362 EIF4E3 (ENSCPBG00000006415) #26 GPR27 (ENSCPBG00000006421) #27 PROK2 (ENSCPBG00000006431) #28 RYBP (ENSCPBG00000006439) #29 SHQ1 (ENSCPBG00000006441) #30 GXYLT2 (ENSCPBG00000006448) #31 PPP4R2 (ENSCPBG00000006460) PDZRN3 (ENSCPBG00000006475) #33 Three-toed box turtle MODERN SPECIES 33 ENSTMTG00000016884 SLC25A26 (ENSTMTG00000016891) #9 LRIG1 (ENSTMTG00000016908) #10 KBTBD8 (ENSTMTG00000016948) #11 ENSTMTG00000016963 SUCLG2 (ENSTMTG00000016973) #12 ENSTMTG00000016997 TAFA4 (ENSTMTG00000017005) #15 EOGT (ENSTMTG00000017077) #16 TMF1 (ENSTMTG00000017529) #17 UBA3 (ENSTMTG00000017592) #18 ARL6IP5 (ENSTMTG00000017618) #19 ENSTMTG00000017624 LMOD3 (ENSTMTG00000017636) #20 FRMD4B (ENSTMTG00000017669) #21 MITF (ENSTMTG00000017748) #22 ENSTMTG00000017806 ENSTMTG00000017820 MDFIC2 (ENSTMTG00000017833) #23 FOXP1 (ENSTMTG00000017846) #24 EIF4E3 (ENSTMTG00000017896) #26 GPR27 (ENSTMTG00000017910) #27 PROK2 (ENSTMTG00000017933) #28 RYBP (ENSTMTG00000017980) #29 SHQ1 (ENSTMTG00000017994) #30 GXYLT2 (ENSTMTG00000018007) #31 PPP4R2 (ENSTMTG00000018024) PDZRN3 (ENSTMTG00000018055) #33 CNTN3 (ENSTMTG00000018117) #34 CHL1 (ENSTMTG00000018260) #35 ENSTMTG00000018456 Testudinidae ANCESTRAL SPECIES 5 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00650000094763 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000160975 ENSGT00950000183062.a.a.a #33 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 Abingdon island giant tortoise MODERN SPECIES 271 TAFA4 (ENSCABG00000002975) #15 EOGT (ENSCABG00000002970) #16 TMF1 (ENSCABG00000002492) #17 UBA3 (ENSCABG00000001584) #18 ARL6IP5 (ENSCABG00000001557) #19 LMOD3 (ENSCABG00000001554) #20 FRMD4B (ENSCABG00000001547) #21 MITF (ENSCABG00000001540) #22 ENSCABG00000001537 ENSCABG00000001535 MDFIC2 (ENSCABG00000001532) #23 FOXP1 (ENSCABG00000001528) #24 Goode s thornscrub tortoise MODERN SPECIES 21 MAGI1 (ENSGEVG00005004948) #8 ENSGEVG00005004516 SLC25A26 (ENSGEVG00005004455) #9 LRIG1 (ENSGEVG00005004250) #10 KBTBD8 (ENSGEVG00005004176) #11 ENSGEVG00005004158 SUCLG2 (ENSGEVG00005004135) #12 ENSGEVG00005004121 TAFA4 (ENSGEVG00005004105) #15 EOGT (ENSGEVG00005004061) #16 TMF1 (ENSGEVG00005004020) #17 UBA3 (ENSGEVG00005004001) #18 ARL6IP5 (ENSGEVG00005019026) #19 LMOD3 (ENSGEVG00005019002) #20 FRMD4B (ENSGEVG00005018987) #21 MITF (ENSGEVG00005018917) #22 ENSGEVG00005018889 MDFIC2 (ENSGEVG00005018869) #23 FOXP1 (ENSGEVG00005018847) #24 ENSGEVG00005018834 EIF4E3 (ENSGEVG00005018821) #26 GPR27 (ENSGEVG00005018807) #27 PROK2 (ENSGEVG00005018790) #28 RYBP (ENSGEVG00005018775) #29 SHQ1 (ENSGEVG00005018751) #30 GXYLT2 (ENSGEVG00005018737) #31 PPP4R2 (ENSGEVG00005018720) PDZRN3 (ENSGEVG00005018672) #33 ENSGEVG00005018629 CNTN3 (ENSGEVG00005018336) #34 CHL1 (ENSGEVG00005018075) #35 Chinese turtle MODERN SPECIES 839 ENSPSIG00000000073 SLC25A26 (ENSPSIG00000013022) #9 LRIG1 (ENSPSIG00000013027) #10 KBTBD8 (ENSPSIG00000013563) #11 ENSPSIG00000013570 SUCLG2 (ENSPSIG00000013610) #12 ENSPSIG00000013999 ENSPSIG00000000074 TAFA4 (ENSPSIG00000014008) #15 EOGT (ENSPSIG00000014016) #16 TMF1 (ENSPSIG00000015293) #17 UBA3 (ENSPSIG00000015303) #18 ARL6IP5 (ENSPSIG00000016018) #19 LMOD3 (ENSPSIG00000016985) #20 FRMD4B (ENSPSIG00000017130) #21 MITF (ENSPSIG00000012120) #22 ENSPSIG00000006822 ENSPSIG00000007253 MDFIC2 (ENSPSIG00000008400) #23 FOXP1 (ENSPSIG00000008711) #24 EIF4E3 (ENSPSIG00000016957) #26 Lepidosauria ANCESTRAL SPECIES 14 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 tuatara DUPLICATION tuatara MODERN SPECIES 839 PRICKLE2 (ENSSPUG00000011565) ADAMTS9 (ENSSPUG00000011629) MAGI1 (ENSSPUG00000011816) #8 SLC25A26 (ENSSPUG00000011849) #9 LRIG1 (ENSSPUG00000011880) #10 ENSSPUG00000011940 KBTBD8 (ENSSPUG00000011960) #11 SUCLG2 (ENSSPUG00000011973) #12 ENSSPUG00000011992 TAFA4 (ENSSPUG00000011995) #15 EOGT (ENSSPUG00000012017) #16 TMF1 (ENSSPUG00000012051) #17 UBA3 (ENSSPUG00000012110) #18 ARL6IP5 (ENSSPUG00000012126) #19 FRMD4B (ENSSPUG00000012173) #21 ENSSPUG00000012190 #22 ENSSPUG00000012211 #22 ENSSPUG00000012252 MDFIC2 (ENSSPUG00000012307) #23 tuatara MODERN SPECIES 839 ADAMTS9 (ENSSPUG00000011629) MAGI1 (ENSSPUG00000011816) #8 SLC25A26 (ENSSPUG00000011849) #9 LRIG1 (ENSSPUG00000011880) #10 ENSSPUG00000011940 KBTBD8 (ENSSPUG00000011960) #11 SUCLG2 (ENSSPUG00000011973) #12 ENSSPUG00000011992 TAFA4 (ENSSPUG00000011995) #15 EOGT (ENSSPUG00000012017) #16 TMF1 (ENSSPUG00000012051) #17 UBA3 (ENSSPUG00000012110) #18 ARL6IP5 (ENSSPUG00000012126) #19 FRMD4B (ENSSPUG00000012173) #21 ENSSPUG00000012190 #22 ENSSPUG00000012211 #22 ENSSPUG00000012252 MDFIC2 (ENSSPUG00000012307) #23 Episquamata ANCESTRAL SPECIES 4 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 Laterata ANCESTRAL SPECIES 1 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00530000063647.A.a.d ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 Common wall lizard MODERN SPECIES 10 ENSPMRG00000015538 LRIG1 (ENSPMRG00000015530) #10 ENSPMRG00000015524 KBTBD8 (ENSPMRG00000015522) #11 ENSPMRG00000015518 SUCLG2 (ENSPMRG00000015512) #12 ENSPMRG00000015505 TAFA4 (ENSPMRG00000015501) #15 EOGT (ENSPMRG00000015468) #16 TMF1 (ENSPMRG00000015455) #17 UBA3 (ENSPMRG00000015448) #18 ARL6IP5 (ENSPMRG00000015419) #19 LMOD3 (ENSPMRG00000015415) #20 FRMD4B (ENSPMRG00000015388) #21 ENSPMRG00000015381 MITF (ENSPMRG00000015352) #22 ENSPMRG00000015341 MDFIC2 (ENSPMRG00000015336) #23 FOXP1 (ENSPMRG00000015325) #24 EIF4E3 (ENSPMRG00000015314) #26 GPR27 (ENSPMRG00000015304) #27 PROK2 (ENSPMRG00000015300) #28 RYBP (ENSPMRG00000015294) #29 SHQ1 (ENSPMRG00000015291) #30 ENSPMRG00000015274 #32 PDZRN3 (ENSPMRG00000015257) #33 ENSPMRG00000015251 CNTN3 (ENSPMRG00000014964) #34 ENSPMRG00000014911 ENSPMRG00000014875 CHL1 (ENSPMRG00000014819) #35 Argentine black and white tegu MODERN SPECIES 30 ENSSMRG00000000733 SLC25A26 (ENSSMRG00000000770) #9 LRIG1 (ENSSMRG00000000805) #10 KBTBD8 (ENSSMRG00000000879) #11 ENSSMRG00000000887 SUCLG2 (ENSSMRG00000000921) #12 ENSSMRG00000000981 ENSSMRG00000000996 TAFA4 (ENSSMRG00000001030) #15 EOGT (ENSSMRG00000001044) #16 TMF1 (ENSSMRG00000002507) #17 UBA3 (ENSSMRG00000002519) #18 ARL6IP5 (ENSSMRG00000002565) #19 LMOD3 (ENSSMRG00000002566) #20 FRMD4B (ENSSMRG00000002580) #21 MITF (ENSSMRG00000002637) #22 MDFIC2 (ENSSMRG00000002664) #23 FOXP1 (ENSSMRG00000002823) #24 ENSSMRG00000002882 EIF4E3 (ENSSMRG00000002895) #26 GPR27 (ENSSMRG00000002896) #27 PROK2 (ENSSMRG00000002900) #28 RYBP (ENSSMRG00000002983) #29 ENSSMRG00000002992 SHQ1 (ENSSMRG00000003041) #30 GXYLT2 (ENSSMRG00000003071) #31 ENSSMRG00000003079 #32 PDZRN3 (ENSSMRG00000003119) #33 ENSSMRG00000003187 CNTN3 (ENSSMRG00000003298) #34 ENSSMRG00000010160 Toxicofera ANCESTRAL SPECIES 3 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00390000009678 Lizard MODERN SPECIES 1 ENSACAG00000041722 ENSACAG00000036765 ENSACAG00000045320 ENSACAG00000036987 ENSACAG00000035340 ENSACAG00000044038 TAFA4 (ENSACAG00000029595) #15 EOGT (ENSACAG00000015231) #16 TMF1 (ENSACAG00000015244) #17 UBA3 (ENSACAG00000015287) #18 ARL6IP5 (ENSACAG00000034873) #19 LMOD3 (ENSACAG00000015388) #20 FRMD4B (ENSACAG00000015389) #21 ENSACAG00000035967 ENSACAG00000043457 MITF (ENSACAG00000036061) #22 ENSACAG00000028935 ENSACAG00000041007 ENSACAG00000039576 MDFIC2 (ENSACAG00000013680) #23 ENSACAG00000043836 FOXP1 (ENSACAG00000013683) #24 ENSACAG00000042406 ENSACAG00000038806 ENSACAG00000042966 ENSACAG00000028536 ENSACAG00000045210 EIF4E3 (ENSACAG00000035562) #26 GPR27 (ENSACAG00000036221) #27 PROK2 (ENSACAG00000013932) #28 RYBP (ENSACAG00000014789) #29 Elapidae ANCESTRAL SPECIES 2 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a.s #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00390000009678 Indian cobra MODERN SPECIES 1 ENSNNAG00000005526 SLC25A26 (ENSNNAG00000005554) #9 ENSNNAG00000005679 #10 KBTBD8 (ENSNNAG00000005697) #11 ENSNNAG00000005715 SUCLG2 (ENSNNAG00000005733) #12 ENSNNAG00000005763 TAFA4 (ENSNNAG00000005772) #15 EOGT (ENSNNAG00000005800) #16 TMF1 (ENSNNAG00000005900) #17 UBA3 (ENSNNAG00000006386) #18 ARL6IP5 (ENSNNAG00000006448) #19 LMOD3 (ENSNNAG00000006462) #20 FRMD4B (ENSNNAG00000006495) #21 ENSNNAG00000000263 MITF (ENSNNAG00000000297) #22 MDFIC2 (ENSNNAG00000000344) #23 FOXP1 (ENSNNAG00000000627) #24 EIF4E3 (ENSNNAG00000001669) #26 GPR27 (ENSNNAG00000001680) #27 PROK2 (ENSNNAG00000001687) #28 RYBP (ENSNNAG00000001699) #29 ENSNNAG00000001713 #30 ENSNNAG00000001725 #30 GXYLT2 (ENSNNAG00000001742) #31 ENSNNAG00000001768 #32 PDZRN3 (ENSNNAG00000001782) #33 ENSNNAG00000001814 CNTN3 (ENSNNAG00000001838) #34 CHL1 (ENSNNAG00000001897) #35 CNTN6 (ENSNNAG00000002047) #36 Elapidae_a ANCESTRAL SPECIES 8 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a.s #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00390000009678 Blue-lipped sea krait MODERN SPECIES 3911 ENSLLTG00000016262 #22 Acanthophiinae ANCESTRAL SPECIES 10 ENSGT00940000155820 #8 ENSGT00940000166512 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000163880 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000162026 #28 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a.s #33 ENSGT00940000160282 #34 ENSGT00940000160080 #35 ENSGT00940000160606 #36 ENSGT00940000155198.C #37 ENSGT00390000009678 Eastern brown snake MODERN SPECIES 3 ENSPTXG00000002527 MAGI1 (ENSPTXG00000002562) #8 SLC25A26 (ENSPTXG00000002815) #9 LRIG1 (ENSPTXG00000002859) #10 KBTBD8 (ENSPTXG00000002860) #11 ENSPTXG00000002861 SUCLG2 (ENSPTXG00000002863) #12 ENSPTXG00000002864 TAFA4 (ENSPTXG00000002865) #15 EOGT (ENSPTXG00000002866) #16 TMF1 (ENSPTXG00000002867) #17 UBA3 (ENSPTXG00000002868) #18 ARL6IP5 (ENSPTXG00000002869) #19 LMOD3 (ENSPTXG00000002870) #20 FRMD4B (ENSPTXG00000002871) #21 MITF (ENSPTXG00000002872) #22 MDFIC2 (ENSPTXG00000002874) #23 FOXP1 (ENSPTXG00000002890) #24 EIF4E3 (ENSPTXG00000004035) #26 GPR27 (ENSPTXG00000004036) #27 PROK2 (ENSPTXG00000004037) #28 RYBP (ENSPTXG00000004041) #29 SHQ1 (ENSPTXG00000000044) #30 GXYLT2 (ENSPTXG00000000072) #31 ENSPTXG00000000107 #32 PDZRN3 (ENSPTXG00000000135) #33 CNTN3 (ENSPTXG00000000180) #34 CHL1 (ENSPTXG00000000274) #35 ENSPTXG00000000362 #36 CNTN4 (ENSPTXG00000000390) #37 TRNT1 (ENSPTXG00000000410) Mainland tiger snake MODERN SPECIES 2 ENSNSUG00000007339 SLC25A26 (ENSNSUG00000007291) #9 LRIG1 (ENSNSUG00000007277) #10 KBTBD8 (ENSNSUG00000007230) #11 ENSNSUG00000007229 SUCLG2 (ENSNSUG00000007228) #12 ENSNSUG00000007227 TAFA4 (ENSNSUG00000007226) #15 EOGT (ENSNSUG00000007219) #16 TMF1 (ENSNSUG00000007216) #17 UBA3 (ENSNSUG00000007215) #18 ENSNSUG00000007214 ARL6IP5 (ENSNSUG00000007213) #19 LMOD3 (ENSNSUG00000007212) #20 FRMD4B (ENSNSUG00000007211) #21 MITF (ENSNSUG00000007126) #22 FOXP1 (ENSNSUG00000007011) #24 EIF4E3 (ENSNSUG00000007010) #26 GPR27 (ENSNSUG00000007008) #27 PROK2 (ENSNSUG00000007007) #28 RYBP (ENSNSUG00000007004) #29 ENSNSUG00000006999 #30 ENSNSUG00000006998 #30 GXYLT2 (ENSNSUG00000006994) #31 ENSNSUG00000006992 #32 PDZRN3 (ENSNSUG00000006989) #33 ENSNSUG00000006988 CNTN3 (ENSNSUG00000006618) #34 ENSNSUG00000006605 CHL1 (ENSNSUG00000006603) #35 CNTN6 (ENSNSUG00000006539) #36 Anura ANCESTRAL SPECIES 52 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000159892 #24 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 Leishan spiny toad MODERN SPECIES 11 ENSLLEG00000026610 FRMD4B (ENSLLEG00000026638) #21 ENSLLEG00000026927 LMOD3 (ENSLLEG00000026945) #20 ARL6IP5 (ENSLLEG00000026982) #19 ENSLLEG00000027044 RAF1 (ENSLLEG00000027363) ENSLLEG00000027659 MKRN2 (ENSLLEG00000027692) MKRN2OS (ENSLLEG00000027800) ENSLLEG00000027826 ISY1 (ENSLLEG00000027932) ENSLLEG00000028000 RAB43 (ENSLLEG00000028054) ENSLLEG00000028107 MITF (ENSLLEG00000028151) #22 ENSLLEG00000028405 CDC73 (ENSLLEG00000028448) GLRX2 (ENSLLEG00000028565) IVNS1ABP (ENSLLEG00000028612) ENSLLEG00000028673 ENSLLEG00000028682 ENSLLEG00000028726 SLC25A6 (ENSLLEG00000028913) MDFIC2 (ENSLLEG00000028932) #23 FOXP1 (ENSLLEG00000029038) #24 ENSLLEG00000029545 EIF4E3 (ENSLLEG00000029555) #26 ENSLLEG00000029590 RYBP (ENSLLEG00000029604) #29 ENSLLEG00000029657 Frog MODERN SPECIES 4 ENSXETG00000031632 suclg2 (ENSXETG00000002522) #12 tafa1 (ENSXETG00000047202) #13 ENSXETG00000048185 ENSXETG00000047023 tafa4 (ENSXETG00000035258) #15 eogt (ENSXETG00000016165) #16 ENSXETG00000042531 tmf1 (ENSXETG00000016166) #17 uba3 (ENSXETG00000016167) #18 ENSXETG00000040947 ENSXETG00000040721 arl6ip5 (ENSXETG00000036732) #19 lmod3 (ENSXETG00000043756) #20 frmd4b (ENSXETG00000016169) #21 mitf (ENSXETG00000039276) #22 mgc147226 (ENSXETG00000000147) MDFIC2 (ENSXETG00000044995) #23 ENSXETG00000044720 ENSXETG00000043474 foxp1 (ENSXETG00000008510) #24 eif4e3 (ENSXETG00000046627) #26 gpr27 (ENSXETG00000031117) #27 prok2 (ENSXETG00000035599) rybp (ENSXETG00000015914) #29 ENSXETG00000039956 shq1 (ENSXETG00000032215) #30 gxylt2 (ENSXETG00000015929) #31 ppp4r2 (ENSXETG00000015932) #32 pdzrn3 (ENSXETG00000000401) #33 ENSXETG00000038876 Coelacanth MODERN SPECIES 468 TAFA4 (ENSLACG00000015098) #15 EOGT (ENSLACG00000014440) #16 TMF1 (ENSLACG00000014224) #17 UBA3 (ENSLACG00000014006) #18 ARL6IP5 (ENSLACG00000013944) #19 LMOD3 (ENSLACG00000013863) #20 FRMD4B (ENSLACG00000013132) #21 MITF (ENSLACG00000011547) #22 FOXP1 (ENSLACG00000006064) #24 Actinopterygii ANCESTRAL SPECIES 14 ENSGT00940000156409 ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00390000013995.b.a #29 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000173141 Neopterygii ANCESTRAL SPECIES 59 ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820 #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303 ENSGT00390000010170.a.a #12 ENSGT00940000162607 #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831 #18 ENSGT00390000008631.a #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a #21 ENSGT00940000156326 #22 ENSGT00730000111641 #23 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865 #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859 #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00390000009678 ENSGT01050000244882.b.c.a Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 305 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00730000111641 #23 ENSGT00940000165920.a ENSGT00940000155865.c.a #26 ENSGT00940000165371.b ENSGT00940000164786.b Clupeocephala ANCESTRAL SPECIES 131 ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00730000111641.a #23 ENSGT00940000165920.a ENSGT00940000155865.c.a #26 Euteleosteomorpha ANCESTRAL SPECIES 44 ENSGT00940000153675.a.b.b ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00730000111641.a #23 ENSGT00940000165920.a ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00940000157392.p ENSGT00950000182973.a.c.a.d Acanthomorphata ANCESTRAL SPECIES 3 ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Euacanthomorphacea ANCESTRAL SPECIES 2 ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Percomorphaceae ANCESTRAL SPECIES 7 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Tiger tail seahorse MODERN SPECIES 148 atp5f1b (ENSHCOG00000012891) ENSHCOG00000012868 klhl41b (ENSHCOG00000012812) ENSHCOG00000012801 ENSHCOG00000012775 CLDN10 (ENSHCOG00000012726) ENSHCOG00000000368 cldn10a (ENSHCOG00000012683) abcc4 (ENSHCOG00000012665) ENSHCOG00000000362 ENSHCOG00000012512 UBA3 (ENSHCOG00000012495) #18 arl6ip5b (ENSHCOG00000012448) #19 LMOD3 (ENSHCOG00000012433) #20 FRMD4B (ENSHCOG00000012364) #21 mitfb (ENSHCOG00000012288) #22 ENSHCOG00000012215 eif4e3 (ENSHCOG00000012145) #26 ENSHCOG00000012036 #32 oard1 (ENSHCOG00000012007) guca1b (ENSHCOG00000011987) ENSHCOG00000011960 SYT2 (ENSHCOG00000011953) ENSHCOG00000011932 ENSHCOG00000011915 ENSHCOG00000011907 GGT7 (ENSHCOG00000011895) NCOA6 (ENSHCOG00000011854) plcg1 (ENSHCOG00000011833) zhx3b (ENSHCOG00000011729) rab5if (ENSHCOG00000011725) Percomorphaceae_B ANCESTRAL SPECIES 6 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Ovalentaria ANCESTRAL SPECIES 6 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Ovalentaria_B ANCESTRAL SPECIES 2 ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Pomacentridae ANCESTRAL SPECIES 2 ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b.f ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Pomacentridae_A ANCESTRAL SPECIES 24 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b.f ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Amphiprion ANCESTRAL SPECIES 15 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988.cb ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b.f ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Orange clownfish MODERN SPECIES 22 ENSAPEG00000019751 lemd1 (ENSAPEG00000019700) pm20d1.2 (ENSAPEG00000019615) ENSAPEG00000019503 ENSAPEG00000019467 NFASC (ENSAPEG00000019102) ENSAPEG00000019057 ENSAPEG00000019046 slc16a7 (ENSAPEG00000019033) ENSAPEG00000019028 #13 ENSAPEG00000019018 UBA3 (ENSAPEG00000018946) #18 arl6ip5b (ENSAPEG00000018918) #19 LMOD3 (ENSAPEG00000018905) #20 FRMD4B (ENSAPEG00000018736) #21 mitfb (ENSAPEG00000018693) #22 ENSAPEG00000018598 eif4e3 (ENSAPEG00000018566) #26 ENSAPEG00000018551 guca1b (ENSAPEG00000018546) oard1 (ENSAPEG00000018533) SYT2 (ENSAPEG00000018508) ENSAPEG00000018492 ENSAPEG00000018479 ENSAPEG00000018303 GRM4 (ENSAPEG00000018246) hmga1a (ENSAPEG00000018199) ENSAPEG00000018187 pacsin1a (ENSAPEG00000018156) SPDEF (ENSAPEG00000018147) ilrun (ENSAPEG00000018121) Clown anemonefish MODERN SPECIES 1283 ENSAOCG00000022259 ppdpfa (ENSAOCG00000022270) tpd52l2a (ENSAOCG00000001920) dnajc5aa (ENSAOCG00000002083) GID8 (ENSAOCG00000022305) ENSAOCG00000001632 ENSAOCG00000022388 ENSAOCG00000022399 slc16a7 (ENSAOCG00000022408) ENSAOCG00000022419 #13 ENSAOCG00000022434 UBA3 (ENSAOCG00000002690) #18 arl6ip5b (ENSAOCG00000001639) #19 LMOD3 (ENSAOCG00000022546) #20 FRMD4B (ENSAOCG00000022672) #21 MITF (ENSAOCG00000022699) #22 ENSAOCG00000022757 eif4e3 (ENSAOCG00000022785) #26 ppp4r2a (ENSAOCG00000022804) #32 guca1b (ENSAOCG00000002085) oard1 (ENSAOCG00000022871) SYT2 (ENSAOCG00000022906) ENSAOCG00000022927 ENSAOCG00000001658 ENSAOCG00000023054 GRM4 (ENSAOCG00000023110) hmga1a (ENSAOCG00000023138) ENSAOCG00000002496 pacsin1a (ENSAOCG00000023170) SPDEF (ENSAOCG00000023268) ilrun (ENSAOCG00000023296) Spiny chromis MODERN SPECIES 565 ENSAPOG00000016702 ENSAPOG00000016693 ENSAPOG00000016665 NFASC (ENSAPOG00000016655) ENSAPOG00000016633 ENSAPOG00000016626 slc16a7 (ENSAPOG00000016612) TAFA1 (ENSAPOG00000016587) #13 ENSAPOG00000016575 UBA3 (ENSAPOG00000016547) #18 arl6ip5b (ENSAPOG00000016453) #19 LMOD3 (ENSAPOG00000016412) #20 FRMD4B (ENSAPOG00000016261) #21 mitfb (ENSAPOG00000016236) #22 ENSAPOG00000016170 eif4e3 (ENSAPOG00000016094) #26 ppp4r2a (ENSAPOG00000016057) #32 oard1 (ENSAPOG00000016040) guca1b (ENSAPOG00000015997) SYT2 (ENSAPOG00000015840) ENSAPOG00000015754 ENSAPOG00000015738 ENSAPOG00000015732 Bicolor damselfish MODERN SPECIES 240 lemd1 (ENSSPAG00000018096) pm20d1.2 (ENSSPAG00000018116) ENSSPAG00000018172 ENSSPAG00000018463 ENSSPAG00000018820 ENSSPAG00000018846 ENSSPAG00000018972 ENSSPAG00000019032 slc16a7 (ENSSPAG00000019045) ENSSPAG00000019062 ENSSPAG00000019078 UBA3 (ENSSPAG00000019100) #18 arl6ip5b (ENSSPAG00000019164) #19 LMOD3 (ENSSPAG00000019172) #20 FRMD4B (ENSSPAG00000019183) #21 MITF (ENSSPAG00000019214) #22 ENSSPAG00000019266 eif4e3 (ENSSPAG00000019336) #26 ppp4r2a (ENSSPAG00000019361) #32 guca1b (ENSSPAG00000019383) oard1 (ENSSPAG00000019457) SYT2 (ENSSPAG00000019493) ENSSPAG00000019616 ENSSPAG00000019628 ENSSPAG00000019670 GRM4 (ENSSPAG00000000106) ENSSPAG00000000137 Cichlidae ANCESTRAL SPECIES ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a Pseudocrenilabrinae ANCESTRAL SPECIES 5 ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 18 ENSGT00940000177848 ENSGT00940000156659.g.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a Haplochromini ANCESTRAL SPECIES 20 ENSGT00940000177848 ENSGT00940000156659.g.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000177729 ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a Haplochromini_A ANCESTRAL SPECIES 17 ENSGT00940000177848 ENSGT00940000156659.g.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000178342 ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000163880 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a P. nyererei MODERN SPECIES 339 ENSPNYG00000016283 pm20d1.2 (ENSPNYG00000016330) ENSPNYG00000016490 ENSPNYG00000016630 ENSPNYG00000017192 ENSPNYG00000017214 ENSPNYG00000017376 ENSPNYG00000017387 slc16a7 (ENSPNYG00000017400) ENSPNYG00000017410 TAFA3 (ENSPNYG00000017420) UBA3 (ENSPNYG00000017442) #18 arl6ip5b (ENSPNYG00000017500) #19 lmod3 (ENSPNYG00000017518) FRMD4B (ENSPNYG00000017559) #21 mitfb (ENSPNYG00000017638) #22 ENSPNYG00000017690 eif4e3 (ENSPNYG00000017704) #26 ENSPNYG00000017730 #32 oard1 (ENSPNYG00000017743) guca1b (ENSPNYG00000017770) SYT2 (ENSPNYG00000017859) ENSPNYG00000017879 ENSPNYG00000017892 ENSPNYG00000017905 GRM4 (ENSPNYG00000018018) hmga1a (ENSPNYG00000018055) SMIM29 (ENSPNYG00000018092) pacsin1a (ENSPNYG00000018149) ilrun (ENSPNYG00000018391) BLTP3A (ENSPNYG00000018412) Haplochromini_B ANCESTRAL SPECIES 14 ENSGT00940000154098.b ENSGT00940000156659.g.a ENSGT00940000156659.g.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000163880 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000177729 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a Zebra mbuna MODERN SPECIES 1103 lemd1 (ENSMZEG00005026288) ENSMZEG00005026282 ENSMZEG00005026277 ENSMZEG00005026276 ENSMZEG00005026269 NFASC (ENSMZEG00005026266) ENSMZEG00005026264 ENSMZEG00005026263 slc16a7 (ENSMZEG00005026262) ENSMZEG00005026261 ENSMZEG00005026260 UBA3 (ENSMZEG00005026259) #18 arl6ip5b (ENSMZEG00005026258) #19 LMOD3 (ENSMZEG00005026257) #20 FRMD4B (ENSMZEG00005026256) #21 mitfb (ENSMZEG00005026253) #22 ENSMZEG00005026252 eif4e3 (ENSMZEG00005026251) #26 ENSMZEG00005026250 #32 guca1b (ENSMZEG00005026249) oard1 (ENSMZEG00005026247) SYT2 (ENSMZEG00005026246) ENSMZEG00005026245 ENSMZEG00005026244 ENSMZEG00005026230 GRM4 (ENSMZEG00005026226) ENSMZEG00005026223 SMIM29 (ENSMZEG00005026222) pacsin1a (ENSMZEG00005026221) ilrun (ENSMZEG00005026220) BLTP3A (ENSMZEG00005026216) Burton s mouthbrooder MODERN SPECIES 346 PM20D1 (ENSHBUG00000006508) ENSHBUG00000006522 ENSHBUG00000006542 NFASC (ENSHBUG00000007430) ENSHBUG00000007465 ENSHBUG00000007471 slc16a7 (ENSHBUG00000000891) TAFA1 (ENSHBUG00000000195) #13 TAFA3 (ENSHBUG00000007504) UBA3 (ENSHBUG00000007609) #18 arl6ip5b (ENSHBUG00000007634) #19 LMOD3 (ENSHBUG00000007688) #20 FRMD4B (ENSHBUG00000007720) #21 mitfb (ENSHBUG00000007780) #22 ENSHBUG00000007818 eif4e3 (ENSHBUG00000007849) #26 ENSHBUG00000001185 #32 guca1b (ENSHBUG00000007882) oard1 (ENSHBUG00000007914) SYT2 (ENSHBUG00000007924) ENSHBUG00000007957 ENSHBUG00000007975 ENSHBUG00000008020 GRM4 (ENSHBUG00000008056) ENSHBUG00000008088 SMIM29 (ENSHBUG00000008097) pacsin1a (ENSHBUG00000008147) ilrun (ENSHBUG00000008175) BLTP3A (ENSHBUG00000008196) Lyretail cichlid MODERN SPECIES 321 mfsd4ab (ENSNBRG00000010728) ENSNBRG00000010769 PM20D1 (ENSNBRG00000010800) PM20D1 (ENSNBRG00000010954) ENSNBRG00000011096 ENSNBRG00000011252 NFASC (ENSNBRG00000011672) ENSNBRG00000011811 ENSNBRG00000011819 slc16a7 (ENSNBRG00000011835) ENSNBRG00000011857 TAFA3 (ENSNBRG00000011866) UBA3 (ENSNBRG00000011885) #18 arl6ip5b (ENSNBRG00000011929) #19 FRMD4B (ENSNBRG00000011966) #21 mitfb (ENSNBRG00000012137) #22 ENSNBRG00000012176 eif4e3 (ENSNBRG00000012239) #26 ENSNBRG00000012260 #32 oard1 (ENSNBRG00000012273) guca1b (ENSNBRG00000012287) SYT2 (ENSNBRG00000012295) ENSNBRG00000012353 ENSNBRG00000012364 ENSNBRG00000012393 GRM4 (ENSNBRG00000012602) hmga1a (ENSNBRG00000012619) SMIM29 (ENSNBRG00000012639) pacsin1a (ENSNBRG00000012655) ilrun (ENSNBRG00000012669) BLTP3A (ENSNBRG00000012691) Nile tilapia MODERN SPECIES 12 ENSONIG00000039658 mfsd4ab (ENSONIG00000016917) pm20d1.2 (ENSONIG00000036606) ENSONIG00000035176 ENSONIG00000041119 ENSONIG00000016922 NFASC (ENSONIG00000016929) ENSONIG00000016933 slc16a7 (ENSONIG00000016934) TAFA1 (ENSONIG00000016939) #13 TAFA3 (ENSONIG00000030060) UBA3 (ENSONIG00000016941) #18 arl6ip5b (ENSONIG00000016945) #19 LMOD3 (ENSONIG00000041416) #20 FRMD4B (ENSONIG00000016949) #21 mitfb (ENSONIG00000016952) #22 SYT2 (ENSONIG00000016962) ENSONIG00000016955 eif4e3 (ENSONIG00000016959) #26 ENSONIG00000016960 #32 guca1b (ENSONIG00000016961) oard1 (ENSONIG00000039334) ENSONIG00000031575 ENSONIG00000016963 ENSONIG00000016965 GRM4 (ENSONIG00000016968) hmga1a (ENSONIG00000016976) ENSONIG00000029046 pacsin1a (ENSONIG00000016981) ilrun (ENSONIG00000016983) BLTP3A (ENSONIG00000016984) Midas cichlid MODERN SPECIES ENSACIG00000000072 ENSACIG00000000071 ENSACIG00000000070 ENSACIG00000000069 ENSACIG00000000068 slc16a7 (ENSACIG00000000067) ENSACIG00000000066 ENSACIG00000000065 UBA3 (ENSACIG00000000064) #18 arl6ip5b (ENSACIG00000000063) #19 LMOD3 (ENSACIG00000000062) #20 mitfb (ENSACIG00000000061) #22 ENSACIG00000000060 eif4e3 (ENSACIG00000000059) #26 PPP4R2 (ENSACIG00000000058) guca1b (ENSACIG00000000057) oard1 (ENSACIG00000000056) SYT2 (ENSACIG00000000055) ENSACIG00000000054 ENSACIG00000000053 ENSACIG00000000052 GRM4 (ENSACIG00000000051) ENSACIG00000000050 ENSACIG00000000049 pacsin1a (ENSACIG00000000048) ilrun (ENSACIG00000000047) BLTP3A (ENSACIG00000000046) Atherinomorphae ANCESTRAL SPECIES 3 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a Cyprinodontiformes ANCESTRAL SPECIES 4 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000153675.a.a.a.b ENSGT00940000154332 ENSGT00530000063320.A.j ENSGT00940000177848 ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00390000011238 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a Turquoise killifish MODERN SPECIES 47 ENSNFUG00015015475 TAFA3 (ENSNFUG00015015493) UBA3 (ENSNFUG00015015513) #18 ARL6IP5B (ENSNFUG00015015540) #19 LMOD3 (ENSNFUG00015015562) #20 FRMD4B (ENSNFUG00015015632) #21 UROS (ENSNFUG00015015810) bccip (ENSNFUG00015015862) MITF (ENSNFUG00015015883) #22 Mangrove rivulus MODERN SPECIES 13 CDC42 (ENSKMAG00000007827) ENSKMAG00000007860 mfsd4ab (ENSKMAG00000007882) ENSKMAG00000007942 pm20d1.2 (ENSKMAG00000007960) CHIA (ENSKMAG00000008259) ENSKMAG00000009354 NFASC (ENSKMAG00000009570) slc16a7 (ENSKMAG00000009733) TAFA1 (ENSKMAG00000009763) #13 ENSKMAG00000009778 UBA3 (ENSKMAG00000009812) #18 LMOD3 (ENSKMAG00000009885) #20 arl6ip5b (ENSKMAG00000009896) #19 FRMD4B (ENSKMAG00000009928) #21 mitfb (ENSKMAG00000010000) #22 ENSKMAG00000010050 ENSKMAG00000010077 eif4e3 (ENSKMAG00000010167) #26 ppp4r2a (ENSKMAG00000010201) #32 oard1 (ENSKMAG00000010222) guca1b (ENSKMAG00000010238) SYT2 (ENSKMAG00000010271) ENSKMAG00000010344 ENSKMAG00000010374 ENSKMAG00000010408 GRM4 (ENSKMAG00000010513) hmga1a (ENSKMAG00000010571) ENSKMAG00000010586 pacsin1a (ENSKMAG00000010634) ilrun (ENSKMAG00000010704) Cyprinodontoidei ANCESTRAL SPECIES 3 ENSGT00940000154332 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a Poeciliinae ANCESTRAL SPECIES 2 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.a.b.f ENSGT00940000162989.f.a.b.e ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00390000011238 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988.z ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a Poecilia ANCESTRAL SPECIES 14 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.a.b.f ENSGT00940000162989.f.a.b.e ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00390000011238 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988.z ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a NAME_6 ANCESTRAL SPECIES 23 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.a.b.f ENSGT00940000162989.f.a.b.e ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b.c ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00390000011238 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988.z ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a Sailfin molly MODERN SPECIES 70 NFASC (ENSPLAG00000009852) ENSPLAG00000009375 ENSPLAG00000009358 slc16a7 (ENSPLAG00000009348) slc16a7 (ENSPLAG00000009339) TAFA1 (ENSPLAG00000009318) #13 TAFA3 (ENSPLAG00000009280) UBA3 (ENSPLAG00000009264) #18 arl6ip5b (ENSPLAG00000009197) #19 LMOD3 (ENSPLAG00000009187) #20 FRMD4B (ENSPLAG00000000188) #21 mitfb (ENSPLAG00000008823) #22 ENSPLAG00000008783 ENSPLAG00000008769 eif4e3 (ENSPLAG00000008729) #26 ENSPLAG00000008703 #32 guca1b (ENSPLAG00000008683) oard1 (ENSPLAG00000008591) SYT2 (ENSPLAG00000008579) ENSPLAG00000008507 ENSPLAG00000008487 ENSPLAG00000008453 GRM4 (ENSPLAG00000008102) Amazon molly MODERN SPECIES 370 ENSPFOG00000022448 mfsd4ab (ENSPFOG00000005382) lemd1 (ENSPFOG00000005468) pm20d1.2 (ENSPFOG00000005491) ENSPFOG00000005640 NFASC (ENSPFOG00000005896) ENSPFOG00000006304 ENSPFOG00000006353 slc16a7 (ENSPFOG00000006357) TAFA1 (ENSPFOG00000006406) #13 TAFA3 (ENSPFOG00000006440) UBA3 (ENSPFOG00000006475) #18 arl6ip5b (ENSPFOG00000006581) #19 LMOD3 (ENSPFOG00000006617) #20 FRMD4B (ENSPFOG00000006714) #21 mitfb (ENSPFOG00000007171) #22 ENSPFOG00000007399 ENSPFOG00000007428 eif4e3 (ENSPFOG00000007551) #26 ENSPFOG00000007627 #32 guca1b (ENSPFOG00000007725) oard1 (ENSPFOG00000007773) SYT2 (ENSPFOG00000007780) ENSPFOG00000007908 ENSPFOG00000007912 ENSPFOG00000007918 GRM4 (ENSPFOG00000008171) hmga1a (ENSPFOG00000008457) SMIM29 (ENSPFOG00000008463) pacsin1a (ENSPFOG00000008472) ilrun (ENSPFOG00000008533) Guppy MODERN SPECIES 459 ENSPREG00000004157 mfsd4ab (ENSPREG00000004171) lemd1 (ENSPREG00000004193) pm20d1.2 (ENSPREG00000004200) ENSPREG00000004264 NFASC (ENSPREG00000004518) ENSPREG00000004551 ENSPREG00000004562 slc16a7 (ENSPREG00000004568) TAFA1 (ENSPREG00000004585) #13 TAFA3 (ENSPREG00000004606) UBA3 (ENSPREG00000004620) #18 arl6ip5b (ENSPREG00000004665) #19 LMOD3 (ENSPREG00000004671) #20 FRMD4B (ENSPREG00000004698) #21 mitfb (ENSPREG00000004738) #22 ENSPREG00000004758 ENSPREG00000004768 eif4e3 (ENSPREG00000004801) #26 ENSPREG00000004819 ENSPREG00000004833 #32 guca1b (ENSPREG00000004858) oard1 (ENSPREG00000004913) SYT2 (ENSPREG00000004950) ENSPREG00000004981 ENSPREG00000005014 ENSPREG00000005065 GRM4 (ENSPREG00000005310) hmga1a (ENSPREG00000005345) ENSPREG00000005354 ilrun (ENSPREG00000005364) Platyfish MODERN SPECIES mfsd4ab (ENSXMAG00000016256) lemd1 (ENSXMAG00000029849) pm20d1.2 (ENSXMAG00000005768) ENSXMAG00000016275 ENSXMAG00000024884 NFASC (ENSXMAG00000016316) ENSXMAG00000016379 ENSXMAG00000016383 slc16a7 (ENSXMAG00000016385) TAFA1 (ENSXMAG00000016393) #13 TAFA3 (ENSXMAG00000016396) UBA3 (ENSXMAG00000016399) #18 arl6ip5b (ENSXMAG00000016428) #19 lmod3 (ENSXMAG00000016434) FRMD4B (ENSXMAG00000016435) #21 mitfb (ENSXMAG00000016472) #22 ENSXMAG00000016489 ENSXMAG00000016493 eif4e3 (ENSXMAG00000024672) #26 ENSXMAG00000009582 #32 guca1b (ENSXMAG00000022127) ENSXMAG00000016506 SYT2 (ENSXMAG00000016509) ENSXMAG00000016524 ENSXMAG00000016527 ENSXMAG00000016529 GRM4 (ENSXMAG00000016544) hmga1a (ENSXMAG00000016571) SMIM29 (ENSXMAG00000016573) pacsin1a (ENSXMAG00000016576) ilrun (ENSXMAG00000022264) NAME_4 ANCESTRAL SPECIES 21 ENSGT00940000153675.a.a.a.b ENSGT00940000154332 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a Mummichog MODERN SPECIES 2226 ENSFHEG00000004537 ENSFHEG00000004542 mfsd4ab (ENSFHEG00000004566) lemd1 (ENSFHEG00000004594) pm20d1.2 (ENSFHEG00000004612) ENSFHEG00000004653 ENSFHEG00000006290 NFASC (ENSFHEG00000006412) ENSFHEG00000006437 slc16a7 (ENSFHEG00000006444) TAFA1 (ENSFHEG00000006457) #13 TAFA3 (ENSFHEG00000006494) UBA3 (ENSFHEG00000006559) #18 arl6ip5b (ENSFHEG00000006570) #19 LMOD3 (ENSFHEG00000006588) #20 mitfb (ENSFHEG00000008148) #22 ENSFHEG00000008230 spc25 (ENSFHEG00000008240) eif4e3 (ENSFHEG00000008279) #26 ENSFHEG00000008293 #32 guca1b (ENSFHEG00000008497) oard1 (ENSFHEG00000008533) SYT2 (ENSFHEG00000008553) ENSFHEG00000008583 ENSFHEG00000008603 ENSFHEG00000008681 GRM4 (ENSFHEG00000008715) hmga1a (ENSFHEG00000008729) SMIM29 (ENSFHEG00000008742) pacsin1a (ENSFHEG00000008762) ilrun (ENSFHEG00000008788) Sheepshead minnow MODERN SPECIES 199 ENSCVAG00000004213 mfsd4ab (ENSCVAG00000004196) lemd1 (ENSCVAG00000000114) pm20d1.2 (ENSCVAG00000004157) ENSCVAG00000004135 ENSCVAG00000004114 NFASC (ENSCVAG00000004099) ENSCVAG00000004055 slc16a7 (ENSCVAG00000004047) TAFA1 (ENSCVAG00000004025) #13 TAFA3 (ENSCVAG00000004011) UBA3 (ENSCVAG00000003999) #18 arl6ip5b (ENSCVAG00000003957) #19 LMOD3 (ENSCVAG00000003950) #20 FRMD4B (ENSCVAG00000003936) #21 mitfb (ENSCVAG00000003807) #22 ENSCVAG00000023261 eif4e3 (ENSCVAG00000023205) #26 ENSCVAG00000023190 #32 guca1b (ENSCVAG00000023180) oard1 (ENSCVAG00000023174) SYT2 (ENSCVAG00000023162) ENSCVAG00000023156 ENSCVAG00000023109 ENSCVAG00000023090 GRM4 (ENSCVAG00000023051) hmga1a (ENSCVAG00000023019) SMIM29 (ENSCVAG00000023002) pacsin1a (ENSCVAG00000022993) ilrun (ENSCVAG00000022951) BLTP3A (ENSCVAG00000022934) Oryzias ANCESTRAL SPECIES 4 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a Oryzias_b ANCESTRAL SPECIES 2 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT00600000084428.a Indian medaka MODERN SPECIES 23 mfsd4ab (ENSOMEG00000004151) ENSOMEG00000004200 pm20d1.2 (ENSOMEG00000004248) ENSOMEG00000004332 ENSOMEG00000004351 NFASC (ENSOMEG00000004383) ENSOMEG00000004395 ENSOMEG00000004407 slc16a7 (ENSOMEG00000004416) TAFA1 (ENSOMEG00000004432) #13 ENSOMEG00000004448 UBA3 (ENSOMEG00000004466) #18 arl6ip5b (ENSOMEG00000004482) #19 LMOD3 (ENSOMEG00000004488) #20 FRMD4B (ENSOMEG00000004533) #21 mitfb (ENSOMEG00000004573) #22 ENSOMEG00000004624 eif4e3 (ENSOMEG00000004650) #26 ENSOMEG00000004679 #32 guca1b (ENSOMEG00000004691) oard1 (ENSOMEG00000004709) SYT2 (ENSOMEG00000004746) ENSOMEG00000004820 ENSOMEG00000004839 ENSOMEG00000004950 GRM4 (ENSOMEG00000005033) hmga1a (ENSOMEG00000005055) SMIM29 (ENSOMEG00000005067) pacsin1a (ENSOMEG00000005086) ilrun (ENSOMEG00000005106) BLTP3A (ENSOMEG00000005127) Javanese ricefish MODERN SPECIES 21 ENSOJAG00000010053 mfsd4ab (ENSOJAG00000009960) lemd1 (ENSOJAG00000009921) pm20d1.2 (ENSOJAG00000009665) ENSOJAG00000008913 ENSOJAG00000008820 NFASC (ENSOJAG00000008104) ENSOJAG00000007999 slc16a7 (ENSOJAG00000007947) TAFA1 (ENSOJAG00000007928) #13 ENSOJAG00000007898 #15 UBA3 (ENSOJAG00000007608) #18 arl6ip5b (ENSOJAG00000007573) #19 LMOD3 (ENSOJAG00000007078) #20 FRMD4B (ENSOJAG00000006745) #21 mitfb (ENSOJAG00000006597) #22 ENSOJAG00000006566 eif4e3 (ENSOJAG00000006325) #26 ENSOJAG00000006313 #32 guca1b (ENSOJAG00000006296) oard1 (ENSOJAG00000006290) SYT2 (ENSOJAG00000006280) ENSOJAG00000006263 ENSOJAG00000006258 ENSOJAG00000006093 GRM4 (ENSOJAG00000005734) hmga1a (ENSOJAG00000023934) SMIM29 (ENSOJAG00000023933) pacsin1a (ENSOJAG00000023927) ilrun (ENSOJAG00000023925) BLTP3A (ENSOJAG00000023922) Oryzias_a ANCESTRAL SPECIES ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c.c ENSGT00940000162989.f.b.c.d ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000177729 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00490000043415.k.a ENSGT01090000260066.a.a.d.a.a Japanese Medaka HdrR MODERN SPECIES 21 mfsd4ab (ENSORLG00000013728) ENSORLG00000013694 pm20d1.2 (ENSORLG00000013681) ENSORLG00000013659 ENSORLG00000013629 ENSORLG00000029596 ENSORLG00000024222 ENSORLG00000029358 slc16a7 (ENSORLG00000013616) TAFA1 (ENSORLG00000027193) #13 ENSORLG00000013573 UBA3 (ENSORLG00000013554) #18 arl6ip5b (ENSORLG00000013502) #19 LMOD3 (ENSORLG00000013486) #20 FRMD4B (ENSORLG00000013479) #21 mitfb (ENSORLG00000013461) #22 ENSORLG00000013419 EIF4E3 (ENSORLG00000013391) #26 ENSORLG00000025571 #32 guca1b (ENSORLG00000013359) oard1 (ENSORLG00000013349) SYT2 (ENSORLG00000013338) ENSORLG00000013293 ENSORLG00000013284 ENSORLG00000013280 ENSORLG00000025216 ENSORLG00000013266 ENSORLG00000026301 SMIM29 (ENSORLG00000022781) pacsin1a (ENSORLG00000013207) ILRUN (ENSORLG00000013188) Chinese medaka MODERN SPECIES 38 dnajc11a (ENSOSIG00000004197) ENSOSIG00000004166 ENSOSIG00000004161 mfsd4ab (ENSOSIG00000004155) lemd1 (ENSOSIG00000004147) pm20d1.2 (ENSOSIG00000001811) ENSOSIG00000023720 ENSOSIG00000023712 slc16a7 (ENSOSIG00000023706) TAFA1 (ENSOSIG00000023704) #13 TAFA3 (ENSOSIG00000023703) UBA3 (ENSOSIG00000023700) #18 arl6ip5b (ENSOSIG00000023686) #19 LMOD3 (ENSOSIG00000023685) #20 FRMD4B (ENSOSIG00000023683) #21 mitfb (ENSOSIG00000023681) #22 ENSOSIG00000023675 eif4e3 (ENSOSIG00000023673) #26 ENSOSIG00000023671 #32 guca1b (ENSOSIG00000023670) oard1 (ENSOSIG00000023667) SYT2 (ENSOSIG00000023665) ENSOSIG00000023663 ENSOSIG00000023662 ENSOSIG00000023660 ENSOSIG00000023658 GRM4 (ENSOSIG00000023620) ENSOSIG00000023598 SMIM29 (ENSOSIG00000023597) pacsin1a (ENSOSIG00000023593) ENSOSIG00000023589 Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b Percomorphaceae_D ANCESTRAL SPECIES 4 ENSGT00940000156659 ENSGT00940000162989.f.b.d.a ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b Anabantaria ANCESTRAL SPECIES 3 ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.d.a ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b Zig-zag eel MODERN SPECIES 21 lemd1 (ENSMAMG00000024203) pm20d1.2 (ENSMAMG00000024202) ENSMAMG00000024201 ENSMAMG00000024200 ENSMAMG00000024195 ENSMAMG00000024194 ENSMAMG00000024192 ENSMAMG00000024190 ENSMAMG00000024189 ENSMAMG00000026766 #13 ENSMAMG00000024187 UBA3 (ENSMAMG00000024186) #18 ARL6IP5 (ENSMAMG00000027048) #19 LMOD3 (ENSMAMG00000024184) #20 FRMD4B (ENSMAMG00000024183) #21 MITF (ENSMAMG00000024182) #22 ENSMAMG00000026584 ENSMAMG00000024181 EIF4E3 (ENSMAMG00000024995) #26 ENSMAMG00000024179 ENSMAMG00000024178 #32 ENSMAMG00000024177 ENSMAMG00000024176 ENSMAMG00000024175 ENSMAMG00000024174 ENSMAMG00000028098 ENSMAMG00000024172 ENSMAMG00000024171 ENSMAMG00000024170 ENSMAMG00000024733 PACSIN1 (ENSMAMG00000024168) Anabantoidei ANCESTRAL SPECIES 2 ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b Siamese fighting fish MODERN SPECIES 18 ENSBSLG00000013891 mfsd4ab (ENSBSLG00000013822) pm20d1.2 (ENSBSLG00000013557) ENSBSLG00000013095 ENSBSLG00000012839 ENSBSLG00000012557 ENSBSLG00000012333 NFASC (ENSBSLG00000009873) slc16a7 (ENSBSLG00000009706) ENSBSLG00000009678 #13 TAFA3 (ENSBSLG00000009659) UBA3 (ENSBSLG00000008644) #18 arl6ip5b (ENSBSLG00000008608) #19 LMOD3 (ENSBSLG00000008589) #20 FRMD4B (ENSBSLG00000008481) #21 MITF (ENSBSLG00000008323) #22 ENSBSLG00000008291 ENSBSLG00000003492 sema3b (ENSBSLG00000003485) sema3bl (ENSBSLG00000003475) ENSBSLG00000003470 ENSBSLG00000003468 selenok (ENSBSLG00000003467) actr8 (ENSBSLG00000003465) ENSBSLG00000003463 CHDH (ENSBSLG00000003459) CACNA1D (ENSBSLG00000003429) dcp1a (ENSBSLG00000003397) TKT (ENSBSLG00000003384) nsun5 (ENSBSLG00000003371) ENSBSLG00000003368 Climbing perch MODERN SPECIES 20 ENSATEG00000023369 pm20d1.2 (ENSATEG00000026619) ENSATEG00000023129 ENSATEG00000022234 ENSATEG00000021538 ENSATEG00000020847 ENSATEG00000020585 ENSATEG00000020544 ENSATEG00000026628 ENSATEG00000020528 #13 ENSATEG00000020516 UBA3 (ENSATEG00000020450) #18 ARL6IP5 (ENSATEG00000020415) #19 LMOD3 (ENSATEG00000028174) #20 FRMD4B (ENSATEG00000020382) #21 MITF (ENSATEG00000025665) #22 ENSATEG00000020274 EIF4E3 (ENSATEG00000028400) #26 ENSATEG00000020209 #32 ENSATEG00000026466 ENSATEG00000020099 ENSATEG00000020079 ENSATEG00000020037 ENSATEG00000020017 ENSATEG00000019912 ENSATEG00000019879 hmga1a (ENSATEG00000029103) ENSATEG00000027835 pacsin1a (ENSATEG00000019801) SPDEF (ENSATEG00000019791) ILRUN (ENSATEG00000019774) Carangaria ANCESTRAL SPECIES 2 ENSGT00940000162989.f.b.d.a ENSGT00940000161149 ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b Pleuronectoidei ANCESTRAL SPECIES 24 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.d.a ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b Turbot MODERN SPECIES 2 ENSSMAG00000007973 ENSSMAG00000011803 ENSSMAG00000022401 ENSSMAG00000025820 ENSSMAG00000006675 ENSSMAG00000007860 ENSSMAG00000006602 ENSSMAG00000006583 ENSSMAG00000006514 ENSSMAG00000006497 #13 ENSSMAG00000006483 UBA3 (ENSSMAG00000006421) #18 ARL6IP5 (ENSSMAG00000006402) #19 LMOD3 (ENSSMAG00000006385) #20 FRMD4B (ENSSMAG00000006293) #21 MITF (ENSSMAG00000006262) #22 ENSSMAG00000026540 ENSSMAG00000027760 ENSSMAG00000006151 EIF4E3 (ENSSMAG00000006106) #26 ENSSMAG00000006095 #32 ENSSMAG00000006006 ENSSMAG00000005987 ENSSMAG00000005957 ENSSMAG00000005944 ENSSMAG00000005929 ENSSMAG00000005664 ENSSMAG00000005616 ENSSMAG00000026827 ENSSMAG00000029604 ENSSMAG00000005545 Tongue sole MODERN SPECIES 1 ENSCSEG00000019449 ENSCSEG00000019446 pm20d1.2 (ENSCSEG00000019438) ENSCSEG00000019347 ENSCSEG00000018772 ENSCSEG00000018719 NFASC (ENSCSEG00000018651) ENSCSEG00000018645 slc16a7 (ENSCSEG00000018632) ENSCSEG00000018627 #13 TAFA3 (ENSCSEG00000018619) UBA3 (ENSCSEG00000018598) #18 LMOD3 (ENSCSEG00000018592) #20 arl6ip5b (ENSCSEG00000018585) #19 FRMD4B (ENSCSEG00000018511) #21 mitfb (ENSCSEG00000018476) #22 ENSCSEG00000018463 eif4e3 (ENSCSEG00000018457) #26 guca1b (ENSCSEG00000018453) ENSCSEG00000018435 #32 SYT2 (ENSCSEG00000018415) ENSCSEG00000018403 ENSCSEG00000017902 ENSCSEG00000017881 hmga1a (ENSCSEG00000017875) SMIM29 (ENSCSEG00000017870) pacsin1a (ENSCSEG00000017855) SPDEF (ENSCSEG00000017844) ilrun (ENSCSEG00000017831) ENSCSEG00000017811 taf11 (ENSCSEG00000017802) Carangaria_A ANCESTRAL SPECIES 1 ENSGT00940000156659 ENSGT00940000162989.f.b.d.a ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Seriola ANCESTRAL SPECIES 8 ENSGT00940000162989.f.b.c ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Greater amberjack MODERN SPECIES 228 ENSSDUG00000021165 NFASC (ENSSDUG00000020626) ENSSDUG00000020578 ENSSDUG00000020569 ENSSDUG00000020522 ENSSDUG00000020509 ENSSDUG00000020505 UBA3 (ENSSDUG00000020453) #18 arl6ip5b (ENSSDUG00000020430) #19 LMOD3 (ENSSDUG00000020413) #20 FRMD4B (ENSSDUG00000020391) #21 MITF (ENSSDUG00000020369) #22 ENSSDUG00000020344 eif4e3 (ENSSDUG00000020316) #26 ENSSDUG00000020303 #32 guca1b (ENSSDUG00000020255) oard1 (ENSSDUG00000020232) ENSSDUG00000020215 SYT2 (ENSSDUG00000020202) ENSSDUG00000020179 ENSSDUG00000020170 ENSSDUG00000020145 ENSSDUG00000020135 ENSSDUG00000020108 ENSSDUG00000020073 ENSSDUG00000019643 GRM4 (ENSSDUG00000019602) Yellowtail amberjack MODERN SPECIES 2725 ENSSLDG00000007111 NFASC (ENSSLDG00000007164) ENSSLDG00000007205 ENSSLDG00000007223 slc16a7 (ENSSLDG00000007238) TAFA1 (ENSSLDG00000007256) #13 ENSSLDG00000007275 UBA3 (ENSSLDG00000007295) #18 arl6ip5b (ENSSLDG00000007348) #19 LMOD3 (ENSSLDG00000007374) #20 FRMD4B (ENSSLDG00000007437) #21 mitfb (ENSSLDG00000007666) #22 ENSSLDG00000007698 eif4e3 (ENSSLDG00000007755) #26 ENSSLDG00000007800 #32 guca1b (ENSSLDG00000007830) oard1 (ENSSLDG00000007846) ENSSLDG00000007868 ENSSLDG00000007886 ENSSLDG00000007911 ENSSLDG00000007924 GRM4 (ENSSLDG00000007949) hmga1a (ENSSLDG00000007999) SMIM29 (ENSSLDG00000008016) ENSSLDG00000008031 pacsin1a (ENSSLDG00000008056) SPDEF (ENSSLDG00000008101) Barramundi perch MODERN SPECIES 53 ENSLCAG00010012143 ENSLCAG00010012120 ENSLCAG00010012099 pm20d1.2 (ENSLCAG00010012077) NFASC (ENSLCAG00010011255) ENSLCAG00010011158 ENSLCAG00010011157 slc16a7 (ENSLCAG00010011153) TAFA1 (ENSLCAG00010011151) #13 ENSLCAG00010011149 UBA3 (ENSLCAG00010011079) #18 arl6ip5b (ENSLCAG00010011060) #19 LMOD3 (ENSLCAG00010011056) #20 ENSLCAG00010011054 #20 FRMD4B (ENSLCAG00010010999) #21 mitfb (ENSLCAG00010010894) #22 ENSLCAG00010010882 eif4e3 (ENSLCAG00010010884) #26 ppp4r2a (ENSLCAG00010010880) #32 guca1b (ENSLCAG00010010874) oard1 (ENSLCAG00010010869) SYT2 (ENSLCAG00010010866) ENSLCAG00010010863 ENSLCAG00010010857 ENSLCAG00010010848 GRM4 (ENSLCAG00010010829) ENSLCAG00010010822 SMIM29 (ENSLCAG00010010818) pacsin1a (ENSLCAG00010010814) SPDEF (ENSLCAG00010010811) ilrun (ENSLCAG00010010808) Eupercaria ANCESTRAL SPECIES 4 ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Tetraodontidae ANCESTRAL SPECIES 2 ENSGT00940000159408.v ENSGT00940000153675.a.b.b ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.c ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000177729 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Fugu MODERN SPECIES 15 ENSTRUG00000030508 ENSTRUG00000020316 mfsd4ab (ENSTRUG00000013327) lemd1 (ENSTRUG00000025279) pm20d1.2 (ENSTRUG00000013196) ENSTRUG00000025560 NFASC (ENSTRUG00000012848) ENSTRUG00000029657 slc16a7 (ENSTRUG00000012600) ENSTRUG00000026858 #13 ENSTRUG00000030074 UBA3 (ENSTRUG00000012359) #18 arl6ip5b (ENSTRUG00000012296) #19 LMOD3 (ENSTRUG00000012256) #20 FRMD4B (ENSTRUG00000031158) #21 mitfb (ENSTRUG00000012080) #22 ENSTRUG00000011898 eif4e3 (ENSTRUG00000029505) #26 ENSTRUG00000011777 #32 guca1b (ENSTRUG00000011703) ENSTRUG00000011698 SYT2 (ENSTRUG00000011452) ENSTRUG00000026763 ENSTRUG00000028060 ENSTRUG00000020555 ENSTRUG00000027214 ENSTRUG00000011185 ENSTRUG00000021298 ENSTRUG00000030849 pacsin1a (ENSTRUG00000011060) SPDEF (ENSTRUG00000011048) Tetraodon MODERN SPECIES 24 ENSTNIG00000012549 mfsd4ab (ENSTNIG00000012550) lemd1 (ENSTNIG00000012551) pm20d1.2 (ENSTNIG00000012552) ENSTNIG00000012553 NFASC (ENSTNIG00000012554) ENSTNIG00000012555 ENSTNIG00000012556 slc16a7 (ENSTNIG00000012557) ENSTNIG00000012558 ENSTNIG00000012559 UBA3 (ENSTNIG00000012560) #18 arl6ip5b (ENSTNIG00000012561) #19 LMOD3 (ENSTNIG00000012562) #20 FRMD4B (ENSTNIG00000012563) #21 mitfb (ENSTNIG00000012564) #22 ENSTNIG00000012565 eif4e3 (ENSTNIG00000012566) #26 guca1b (ENSTNIG00000012567) oard1 (ENSTNIG00000012568) SYT2 (ENSTNIG00000012569) ENSTNIG00000012570 ENSTNIG00000012571 ENSTNIG00000012572 GRM4 (ENSTNIG00000012573) ENSTNIG00000012574 pacsin1a (ENSTNIG00000012576) SPDEF (ENSTNIG00000001703) ilrun (ENSTNIG00000012577) BLTP3A (ENSTNIG00000012578) taf11 (ENSTNIG00000012579) Eupecaria_A ANCESTRAL SPECIES 4 ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Ballan wrasse MODERN SPECIES 615 ENSLBEG00000012944 NFASC (ENSLBEG00000012107) ENSLBEG00000011882 ENSLBEG00000011864 slc16a7 (ENSLBEG00000011850) TAFA1 (ENSLBEG00000011836) #13 TAFA3 (ENSLBEG00000011820) UBA3 (ENSLBEG00000011704) #18 arl6ip5b (ENSLBEG00000011648) #19 LMOD3 (ENSLBEG00000011574) #20 FRMD4B (ENSLBEG00000011477) #21 mitfb (ENSLBEG00000011386) #22 Eupecaria_B ANCESTRAL SPECIES 5 ENSGT00940000156659 ENSGT00940000161149 ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b Perciformes ANCESTRAL SPECIES 4 ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b Perciformes_a ANCESTRAL SPECIES 2 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000178117 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b Channel bull blenny MODERN SPECIES 21 ENSCGOG00000022746 ENSCGOG00000022754 ENSCGOG00000022758 ENSCGOG00000022769 ENSCGOG00000023065 ENSCGOG00000023075 NFASC (ENSCGOG00000023362) ENSCGOG00000023452 slc16a7 (ENSCGOG00000023455) TAFA1 (ENSCGOG00000023456) #13 ENSCGOG00000023459 UBA3 (ENSCGOG00000023478) #18 LMOD3 (ENSCGOG00000023691) #20 arl6ip5b (ENSCGOG00000023690) #19 FRMD4B (ENSCGOG00000023692) #21 mitfb (ENSCGOG00000000480) #22 ENSCGOG00000000562 eif4e3 (ENSCGOG00000000575) #26 ppp4r2a (ENSCGOG00000000601) #32 guca1b (ENSCGOG00000000606) oard1 (ENSCGOG00000000615) SYT2 (ENSCGOG00000000622) ENSCGOG00000000630 ENSCGOG00000000634 ENSCGOG00000000639 GRM4 (ENSCGOG00000000653) ENSCGOG00000000668 SMIM29 (ENSCGOG00000000672) pacsin1a (ENSCGOG00000000682) SPDEF (ENSCGOG00000000705) ilrun (ENSCGOG00000000707) Pike perch MODERN SPECIES 31 LDHB (ENSSLUG00000002439) ENSSLUG00000002433 gys2 (ENSSLUG00000002382) spx (ENSSLUG00000002360) golt1ba (ENSSLUG00000002345) recql (ENSSLUG00000001800) caprin2 (ENSSLUG00000001489) ENSSLUG00000001476 ENSSLUG00000001450 ENSSLUG00000001390 ENSSLUG00000024955 UBA3 (ENSSLUG00000024887) #18 arl6ip5b (ENSSLUG00000024880) #19 LMOD3 (ENSSLUG00000024877) #20 FRMD4B (ENSSLUG00000024860) #21 mitfb (ENSSLUG00000024839) #22 ENSSLUG00000024830 ENSSLUG00000024823 eif4e3 (ENSSLUG00000024819) #26 ENSSLUG00000024814 guca1b (ENSSLUG00000024812) oard1 (ENSSLUG00000024810) SYT2 (ENSSLUG00000024808) ENSSLUG00000024803 ENSSLUG00000024799 ENSSLUG00000024788 ENSSLUG00000024785 GRM4 (ENSSLUG00000024781) hmga1a (ENSSLUG00000024780) SMIM29 (ENSSLUG00000024779) pacsin1a (ENSSLUG00000024771) Cottioidei ANCESTRAL SPECIES 2 ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a ENSGT00600000084428.a Lumpfish MODERN SPECIES 22 pm20d1.2 (ENSCLMG00005014717) ENSCLMG00005014791 ENSCLMG00005014792 ENSCLMG00005014793 ENSCLMG00005014805 ENSCLMG00005014824 NFASC (ENSCLMG00005016008) ENSCLMG00005016101 slc16a7 (ENSCLMG00005016105) ENSCLMG00005016128 #13 ENSCLMG00005016130 UBA3 (ENSCLMG00005016140) #18 arl6ip5b (ENSCLMG00005016192) #19 LMOD3 (ENSCLMG00005016194) #20 FRMD4B (ENSCLMG00005016199) #21 mitfb (ENSCLMG00005016206) #22 ENSCLMG00005016275 eif4e3 (ENSCLMG00005016277) #26 ENSCLMG00005016281 #32 guca1b (ENSCLMG00005016282) oard1 (ENSCLMG00005016285) SYT2 (ENSCLMG00005016314) ENSCLMG00005016315 ENSCLMG00005002965 ENSCLMG00005002982 GRM4 (ENSCLMG00005003011) ENSCLMG00005003026 SMIM29 (ENSCLMG00005003029) pacsin1a (ENSCLMG00005003034) SPDEF (ENSCLMG00005003041) ILRUN (ENSCLMG00005003045) Stickleback MODERN SPECIES 11 MTCH1 (ENSGACG00000003602) stk38a (ENSGACG00000003596) dennd2da (ENSGACG00000003580) ENSGACG00000003565 ENSGACG00000003535 NFASC (ENSGACG00000003505) ENSGACG00000003501 ENSGACG00000003497 slc16a7 (ENSGACG00000003483) ENSGACG00000003481 TAFA3 (ENSGACG00000003478) UBA3 (ENSGACG00000003450) #18 arl6ip5b (ENSGACG00000003444) #19 LMOD3 (ENSGACG00000003438) #20 FRMD4B (ENSGACG00000003431) #21 MITF (ENSGACG00000003425) #22 ENSGACG00000003402 eif4e3 (ENSGACG00000003392) #26 ENSGACG00000003388 #32 guca1b (ENSGACG00000003369) oard1 (ENSGACG00000003364) SYT2 (ENSGACG00000003359) ENSGACG00000003354 ENSGACG00000003351 ENSGACG00000003349 ENSGACG00000003339 GRM4 (ENSGACG00000003323) SMIM29 (ENSGACG00000003322) pacsin1a (ENSGACG00000003301) SPDEF (ENSGACG00000003298) ilrun (ENSGACG00000003293) Eupecaria_C ANCESTRAL SPECIES 5 ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000161149 ENSGT00940000162989.f.b.d.b ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000177729 ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 15 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000161149 ENSGT00940000162989.f.b.c ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000167980 ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000167932 ENSGT00410000025882.b ENSGT00950000182973.a.c.a.d ENSGT00940000157549.b ENSGT00490000043415.k.a Large yellow croaker MODERN SPECIES 487 mfsd4ab (ENSLCRG00005013017) lemd1 (ENSLCRG00005012991) ENSLCRG00005012982 ENSLCRG00005012980 pm20d1.2 (ENSLCRG00005012768) ENSLCRG00005012818 NFASC (ENSLCRG00005007916) ENSLCRG00005007131 slc16a7 (ENSLCRG00005007129) TAFA1 (ENSLCRG00005007127) #13 ENSLCRG00005007121 UBA3 (ENSLCRG00005006934) #18 arl6ip5b (ENSLCRG00005006858) #19 LMOD3 (ENSLCRG00005006849) #20 FRMD4B (ENSLCRG00005006784) #21 mitfb (ENSLCRG00005005088) #22 ENSLCRG00005004789 ENSLCRG00005004742 eif4e3 (ENSLCRG00005004729) #26 ppp4r2a (ENSLCRG00005004700) #32 guca1b (ENSLCRG00005004667) oard1 (ENSLCRG00005004663) SYT2 (ENSLCRG00005004649) ENSLCRG00005004624 ENSLCRG00005004608 ENSLCRG00005004592 GRM4 (ENSLCRG00005003603) ENSLCRG00005003421 SMIM29 (ENSLCRG00005003415) pacsin1a (ENSLCRG00005022218) SPDEF (ENSLCRG00005022189) European seabass MODERN SPECIES 14 ENSDLAG00005010528 mfsd4ab (ENSDLAG00005010644) lemd1 (ENSDLAG00005010677) pm20d1.2 (ENSDLAG00005010710) ENSDLAG00005011089 ENSDLAG00005027768 ENSDLAG00005011494 ENSDLAG00005030461 ENSDLAG00005014640 ENSDLAG00005034826 #13 ENSDLAG00005026511 UBA3 (ENSDLAG00005014726) #18 ARL6IP5 (ENSDLAG00005015672) #19 LMOD3 (ENSDLAG00005015682) #20 FRMD4B (ENSDLAG00005015693) #21 MITF (ENSDLAG00005016175) #22 ENSDLAG00005016425 ENSDLAG00005032959 #32 ENSDLAG00005029171 ENSDLAG00005016562 ENSDLAG00005032742 ENSDLAG00005016624 ENSDLAG00005016641 ENSDLAG00005016672 hmga1a (ENSDLAG00005016792) ENSDLAG00005030656 pacsin1a (ENSDLAG00005016814) SPDEF (ENSDLAG00005016913) ILRUN (ENSDLAG00005026599) BLTP3A (ENSDLAG00005016949) TAF11 (ENSDLAG00005027404) Gilthead seabream MODERN SPECIES 21 ENSSAUG00010008459 ENSSAUG00010008454 ENSSAUG00010008452 ENSSAUG00010008142 ENSSAUG00010007727 ENSSAUG00010007222 NFASC (ENSSAUG00010006405) ENSSAUG00010006403 slc16a7 (ENSSAUG00010006402) TAFA1 (ENSSAUG00010006400) #13 TAFA3 (ENSSAUG00010006399) UBA3 (ENSSAUG00010005022) #18 arl6ip5b (ENSSAUG00010005020) #19 LMOD3 (ENSSAUG00010005019) #20 FRMD4B (ENSSAUG00010004427) #21 mitfb (ENSSAUG00010004313) #22 ENSSAUG00010004303 eif4e3 (ENSSAUG00010004299) #26 ppp4r2a (ENSSAUG00010004280) #32 guca1b (ENSSAUG00010004275) oard1 (ENSSAUG00010004272) SYT2 (ENSSAUG00010004264) ENSSAUG00010004255 ENSSAUG00010004252 ENSSAUG00010004241 GRM4 (ENSSAUG00010004196) ENSSAUG00010004159 ENSSAUG00010004092 pacsin1a (ENSSAUG00010023975) SPDEF (ENSSAUG00010023973) ilrun (ENSSAUG00010023972) Pinecone sodierfish MODERN SPECIES 21 mfsd4ab (ENSMMDG00005018996) lemd1 (ENSMMDG00005018991) pm20d1.2 (ENSMMDG00005018956) ENSMMDG00005018947 ENSMMDG00005018457 ENSMMDG00005017989 NFASC (ENSMMDG00005017792) ENSMMDG00005017781 slc16a7 (ENSMMDG00005017707) ENSMMDG00005017705 ENSMMDG00005017702 UBA3 (ENSMMDG00005017099) #18 arl6ip5b (ENSMMDG00005017082) #19 LMOD3 (ENSMMDG00005017081) #20 FRMD4B (ENSMMDG00005017076) #21 mitfb (ENSMMDG00005016805) #22 ENSMMDG00005016802 eif4e3 (ENSMMDG00005016796) #26 ENSMMDG00005016793 #32 guca1b (ENSMMDG00005016790) oard1 (ENSMMDG00005016788) SYT2 (ENSMMDG00005016786) ENSMMDG00005016784 ENSMMDG00005016777 GRM4 (ENSMMDG00005016739) ENSMMDG00005016728 SMIM29 (ENSMMDG00005016725) pacsin1a (ENSMMDG00005016719) SPDEF (ENSMMDG00005016706) ilrun (ENSMMDG00005016703) BLTP3A (ENSMMDG00005016702) Cod MODERN SPECIES ENSGMOG00000009770 ENSGMOG00000009725 ENSGMOG00000010358 ENSGMOG00000010338 ENSGMOG00000029644 ENSGMOG00000010329 ENSGMOG00000010281 ENSGMOG00000025024 ENSGMOG00000010260 ENSGMOG00000010255 UBA3 (ENSGMOG00000010238) #18 ARL6IP5 (ENSGMOG00000010233) #19 LMOD3 (ENSGMOG00000028614) #20 FRMD4B (ENSGMOG00000010202) #21 ENSGMOG00000033892 MITF (ENSGMOG00000010175) #22 ENSGMOG00000010153 EIF4E3 (ENSGMOG00000010140) #26 ENSGMOG00000010131 #32 ENSGMOG00000010119 ENSGMOG00000010113 ENSGMOG00000015030 ENSGMOG00000036092 ENSGMOG00000010089 ENSGMOG00000010082 ENSGMOG00000010065 hmga1a (ENSGMOG00000024668) ENSGMOG00000026218 pacsin1a (ENSGMOG00000010048) SPDEF (ENSGMOG00000023283) ILRUN (ENSGMOG00000010041) Protacanthopterygii ANCESTRAL SPECIES 6 ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000177848 ENSGT00940000156659 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00730000111641.a #23 ENSGT00940000165920.a ENSGT00940000155865.c.a #26 ENSGT00940000162859.p #32 ENSGT00940000157530.a ENSGT00390000006988 ENSGT00940000157586.f ENSGT00940000166065.b ENSGT00390000013981.a ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a ENSGT00940000177729 ENSGT00410000025882.b ENSGT00940000157392.p ENSGT00440000034918.h Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 10 ENSGT00940000162344 ENSGT00940000160063.g.b.d ENSGT00940000159408.r ENSGT00940000153675.a.b.b.d ENSGT00940000177848 ENSGT00940000156659.d ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b.f ENSGT00940000154738.b ENSGT00940000162607.a.c #13 ENSGT00940000155644.b.a.b.c ENSGT00550000074831.l.c.a #18 ENSGT00390000008631.a.o.b.f #19 ENSGT00940000159731.f #20 ENSGT01020000230354.A.a.b.e #21 ENSGT00940000156326.a.a.a #22 ENSGT00730000111641.a #23 ENSGT00940000165920.a.a.a ENSGT00940000155865.c.a.d #26 ENSGT00940000162859.p.f #32 ENSGT00940000157530.a.g ENSGT00390000006988.gb ENSGT00940000157586.f.c ENSGT00940000166065.b.c ENSGT00940000157067 Salmoninae_a ANCESTRAL SPECIES 14 ENSGT00940000162344 ENSGT00940000159408.r ENSGT00940000153675.a.a.a.b.c.a ENSGT00940000178268.b ENSGT00940000177848.a ENSGT00940000156659.d ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b.f ENSGT00940000154738.b ENSGT00940000162607.a.c #13 ENSGT00940000155644.b.a.b.c ENSGT00550000074831.l.c.a #18 ENSGT00390000008631.a.o.b.f #19 ENSGT00940000159731.f #20 ENSGT01020000230354.A.a.b.e #21 ENSGT00940000156326.a.a.a #22 ENSGT00730000111641.a #23 ENSGT00940000165920.a.a.a ENSGT00940000155865.c.a.d #26 ENSGT00940000162859.p.f #32 ENSGT00940000157530.a.g ENSGT00390000006988.gb ENSGT00940000157586.f.c ENSGT00940000166065.b.c ENSGT00390000013981.a.a ENSGT01030000234648.a.b.a.a.a.f.a.d ENSGT00940000177729.a ENSGT00410000025882.b.c ENSGT00940000157983.ab ENSGT00940000157882.j.b ENSGT00440000034918.g.b.b Salmo ANCESTRAL SPECIES 4 ENSGT00940000159408.r ENSGT00940000153675.a.b.b.d ENSGT00940000153675.a.a.a.b.c.a ENSGT00940000178268.b ENSGT00940000177848.a ENSGT00940000156659.d ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b.f ENSGT00940000154738.b ENSGT00940000162607.a.c #13 ENSGT00940000155644.b.a.b.c ENSGT00550000074831.l.c.a #18 ENSGT00390000008631.a.o.b.f #19 ENSGT00940000159731.f #20 ENSGT01020000230354.A.a.b.e #21 ENSGT00940000156326.a.a.a #22 ENSGT00730000111641.a #23 ENSGT00940000165920.a.a.a ENSGT00940000155865.c.a.d #26 ENSGT00940000162859.p.f #32 ENSGT00940000157530.a.g ENSGT00390000006988.gb ENSGT00940000157586.f.c ENSGT00940000166065.b.c ENSGT00390000013981.a.a ENSGT01030000234648.a.b.a.a.a.f.a.d ENSGT00940000177729.a ENSGT00410000025882.b.c ENSGT00940000157983.ab ENSGT00940000157882.j.b ENSGT00440000034918.g.b.b River trout MODERN SPECIES 23 ENSSTUG00000032083 CDC42 (ENSSTUG00000032102) ENSSTUG00000032124 ENSSTUG00000032154 PM20D1 (ENSSTUG00000032212) ENSSTUG00000032455 NFASC (ENSSTUG00000032990) ENSSTUG00000037241 TAFA1 (ENSSTUG00000037250) #13 ENSSTUG00000037258 #15 ENSSTUG00000037268 UBA3 (ENSSTUG00000037289) #18 arl6ip5b (ENSSTUG00000037735) #19 LMOD3 (ENSSTUG00000037759) #20 FRMD4B (ENSSTUG00000037769) #21 MITF (ENSSTUG00000037895) #22 MDFIC2 (ENSSTUG00000038012) #23 foxp1a (ENSSTUG00000038017) eif4e3 (ENSSTUG00000038040) #26 ppp4r2a (ENSSTUG00000038058) #32 guca1b (ENSSTUG00000038083) oard1 (ENSSTUG00000038101) SYT2 (ENSSTUG00000038114) ENSSTUG00000038124 ENSSTUG00000038140 GRM4 (ENSSTUG00000038163) ENSSTUG00000038228 ENSSTUG00000038244 ENSSTUG00000038267 ENSSTUG00000038281 rps10 (ENSSTUG00000038295) Atlantic salmon MODERN SPECIES 4 THAP3 (ENSSSAG00000111460) ENSSSAG00000038910 CDC42 (ENSSSAG00000038975) ENSSSAG00000039097 ENSSSAG00000039161 ENSSSAG00000039296 ENSSSAG00000040954 ENSSSAG00000044914 fam19a1 (ENSSSAG00000064370) #13 fam19a4 (ENSSSAG00000086359) ENSSSAG00000083767 UBA3 (ENSSSAG00000064406) #18 ARL6IP5 (ENSSSAG00000098965) #19 LMOD3 (ENSSSAG00000064484) #20 frmd4b (ENSSSAG00000064502) #21 mitf (ENSSSAG00000064604) #22 MDFIC2 (ENSSSAG00000111369) #23 ENSSSAG00000065486 ENSSSAG00000065498 #32 ENSSSAG00000065502 ENSSSAG00000065505 ENSSSAG00000089458 ENSSSAG00000091810 ENSSSAG00000065542 ENSSSAG00000004685 ENSSSAG00000065560 SMIM29 (ENSSSAG00000065565) ENSSSAG00000103559 nudt3a (ENSSSAG00000115927) RPS10 (ENSSSAG00000065595) pacsin1a (ENSSSAG00000074166) Oncorhynchus ANCESTRAL SPECIES 7 ENSGT00940000162344 ENSGT00940000159408.r ENSGT00940000153675.a.a.a.b.c.a ENSGT00940000178268.b ENSGT00940000177848.a ENSGT00940000156659.d ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b.f ENSGT00940000154738.b ENSGT00940000162607.a.c #13 ENSGT00940000155644.b.a.b.c ENSGT00550000074831.l.c.a #18 ENSGT00390000008631.a.o.b.f #19 ENSGT00940000159731.f #20 ENSGT01020000230354.A.a.b.e #21 ENSGT00940000156326.a.a.a #22 ENSGT00730000111641.a #23 ENSGT00940000165920.a.a.a ENSGT00940000155865.c.a.d #26 ENSGT00940000162859.p.f #32 ENSGT00940000157530.a.g ENSGT00390000006988.gb ENSGT00940000157586.f.c ENSGT00940000166065.b.c ENSGT00390000013981.a.a ENSGT01030000234648.a.b.a.a.a.f.a.d ENSGT00940000177729.a ENSGT00410000025882.b.c ENSGT00940000157983.ab.a.a ENSGT00940000157882.j.b ENSGT00440000034918.g.b.b Rainbow trout MODERN SPECIES 7 ENSOMYG00000013218 ENSOMYG00000013224 ENSOMYG00000069046 ENSOMYG00000068224 ENSOMYG00000049959 ENSOMYG00000068169 ENSOMYG00000010920 ENSOMYG00000066888 ENSOMYG00000032802 #13 ENSOMYG00000048510 ENSOMYG00000054036 UBA3 (ENSOMYG00000033007) #18 ARL6IP5 (ENSOMYG00000033611) #19 LMOD3 (ENSOMYG00000033623) #20 FRMD4B (ENSOMYG00000033633) #21 MITF (ENSOMYG00000033659) #22 ENSOMYG00000058567 foxp1a (ENSOMYG00000033705) ENSOMYG00000033738 #26 ppp4r2a (ENSOMYG00000033725) #32 ENSOMYG00000033756 ENSOMYG00000033774 ENSOMYG00000033784 ENSOMYG00000033803 ENSOMYG00000033831 ENSOMYG00000033863 ENSOMYG00000033908 ENSOMYG00000033921 socs2b (ENSOMYG00000051998) ENSOMYG00000059109 ENSOMYG00000034103 Oncorhynchus_a ANCESTRAL SPECIES 9 ENSGT00940000162344 ENSGT00940000159408.r ENSGT00940000153675.a.a.a.b.c.a ENSGT00940000178268.b ENSGT00940000177848.a ENSGT00940000156659.d ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b.f ENSGT00940000154738.b ENSGT00940000162607.a.c #13 ENSGT00940000155644.b.a.b.c ENSGT00550000074831.l.c.a #18 ENSGT00390000008631.a.o.b.f #19 ENSGT00940000159731.f #20 ENSGT01020000230354.A.a.b.e #21 ENSGT00940000156326.a.a.a #22 ENSGT00730000111641.a #23 ENSGT00940000165920.a.a.a ENSGT00940000155865.c.a.d #26 ENSGT00940000162859.p.f #32 ENSGT00940000157530.a.g ENSGT00390000006988.gb ENSGT00940000157586.f.c ENSGT00940000166065.b.c ENSGT00390000013981.a.a ENSGT01030000234648.a.b.a.a.a.f.a.d ENSGT00940000177729.a ENSGT00410000025882.b.c ENSGT00940000157983.ab.a.a ENSGT00940000157882.j.b ENSGT00440000034918.g.b.b Coho salmon MODERN SPECIES 16 ENSOKIG00005044811 CDC42 (ENSOKIG00005044819) ENSOKIG00005044829 ENSOKIG00005044832 PM20D1 (ENSOKIG00005044871) ENSOKIG00005045308 NFASC (ENSOKIG00005046330) ENSOKIG00005046474 ENSOKIG00005046479 TAFA1 (ENSOKIG00005046480) #13 TAFA3 (ENSOKIG00005046483) UBA3 (ENSOKIG00005046501) #18 arl6ip5b (ENSOKIG00005046677) #19 LMOD3 (ENSOKIG00005046691) #20 FRMD4B (ENSOKIG00005046708) #21 MITF (ENSOKIG00005046858) #22 MDFIC2 (ENSOKIG00005047135) #23 foxp1a (ENSOKIG00005047142) EIF4E3 (ENSOKIG00005047152) #26 ppp4r2a (ENSOKIG00005047161) #32 guca1b (ENSOKIG00005047180) SYT2 (ENSOKIG00005047233) ENSOKIG00005047271 ENSOKIG00005047284 GRM4 (ENSOKIG00005047297) ENSOKIG00005047312 ENSOKIG00005047320 ENSOKIG00005047323 ENSOKIG00005047331 ENSOKIG00005047337 pacsin1a (ENSOKIG00005047396) Chinook salmon MODERN SPECIES 14 ENSOTSG00005037149 CDC42 (ENSOTSG00005037186) ENSOTSG00005037188 ENSOTSG00005037189 PM20D1 (ENSOTSG00005037191) ENSOTSG00005037331 ENSOTSG00005037343 NFASC (ENSOTSG00005038263) ENSOTSG00005042186 TAFA1 (ENSOTSG00005042187) #13 TAFA3 (ENSOTSG00005042188) UBA3 (ENSOTSG00005042189) #18 arl6ip5b (ENSOTSG00005042307) #19 LMOD3 (ENSOTSG00005042308) #20 FRMD4B (ENSOTSG00005042310) #21 MITF (ENSOTSG00005042311) #22 ENSOTSG00005042349 #23 foxp1a (ENSOTSG00005042350) eif4e3 (ENSOTSG00005042351) #26 ppp4r2a (ENSOTSG00005042352) #32 guca1b (ENSOTSG00005042353) oard1 (ENSOTSG00005042358) SYT2 (ENSOTSG00005042359) ENSOTSG00005042360 ENSOTSG00005042361 GRM4 (ENSOTSG00005042362) ENSOTSG00005042364 ENSOTSG00005042365 ENSOTSG00005042366 ENSOTSG00005042367 rps10 (ENSOTSG00005042368) Huchen MODERN SPECIES 794 ENSHHUG00000037315 ENSHHUG00000037292 PM20D1 (ENSHHUG00000037202) ENSHHUG00000037067 NFASC (ENSHHUG00000037005) ENSHHUG00000037003 TAFA1 (ENSHHUG00000036998) #13 TAFA3 (ENSHHUG00000036992) UBA3 (ENSHHUG00000036941) #18 arl6ip5b (ENSHHUG00000036931) #19 LMOD3 (ENSHHUG00000036929) #20 FRMD4B (ENSHHUG00000036874) #21 mitfb (ENSHHUG00000036835) #22 foxp1a (ENSHHUG00000036828) eif4e3 (ENSHHUG00000036793) #26 ppp4r2a (ENSHHUG00000036772) #32 guca1b (ENSHHUG00000036760) oard1 (ENSHHUG00000036755) SYT2 (ENSHHUG00000036748) ENSHHUG00000036740 ENSHHUG00000036736 Salmoninae ANCESTRAL SPECIES 28 ENSGT00940000159408.q.a ENSGT00940000159408.q.b ENSGT00940000153675.a.b.b.c ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659.c ENSGT00940000157024.k.b.e ENSGT00940000164303.b.b ENSGT00940000162607.a.d #13 ENSGT00940000155644.b.a.b.d ENSGT00550000074831.l.c.b #18 ENSGT00390000008631.a.o.b.e #19 ENSGT00940000159731.e #20 ENSGT01020000230354.A.a.b.f #21 ENSGT00940000156326.a.a.b #22 ENSGT00940000167980 ENSGT00940000155865.c.a.c #26 ENSGT00940000162859.p.e #32 ENSGT00940000157530.a.h ENSGT00390000006988.fb ENSGT00940000157586.f.d ENSGT00940000166065.b.d ENSGT00390000013981.a.b ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a.c ENSGT00940000177729.b ENSGT00410000025882.b.d ENSGT00940000157392.p ENSGT00940000157882.j.a ENSGT00440000034918.g.b.a Salmoninae_a ANCESTRAL SPECIES 27 ENSGT00940000159408.q.a ENSGT00940000159408.q.b ENSGT00940000153675.a.b.b.c ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659.c ENSGT00940000157024.k.b.e ENSGT00940000164303.b.b ENSGT00940000162607.a.d #13 ENSGT00940000155644.b.a.b.d ENSGT00550000074831.l.c.b #18 ENSGT00390000008631.a.o.b.e #19 ENSGT00940000159731.e #20 ENSGT01020000230354.A.a.b.f #21 ENSGT00940000156326.a.a.b #22 ENSGT00940000167980 ENSGT00940000155865.c.a.c #26 ENSGT00940000162859.p.e #32 ENSGT00940000157530.a.h ENSGT00390000006988.fb ENSGT00940000157586.f.d ENSGT00940000166065.b.d ENSGT00390000013981.a.b ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a.c ENSGT00940000177729.b ENSGT00410000025882.b.d ENSGT00940000157392.p ENSGT00940000157882.j.a ENSGT00440000034918.g.b.a Salmo ANCESTRAL SPECIES 16 ENSGT00860000133842.n.d ENSGT00940000159408.q.a ENSGT00940000159408.q.b ENSGT00940000153675.a.b.b.c ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659.c ENSGT00940000157024.k.b.e ENSGT00940000164303.b.b ENSGT00940000162607.a.d #13 ENSGT00940000155644.b.a.b.d ENSGT00550000074831.l.c.b #18 ENSGT00390000008631.a.o.b.e #19 ENSGT01020000230354.A.a.b.f #21 ENSGT00940000156326.a.a.b #22 ENSGT00940000167980 ENSGT00940000155865.c.a.c #26 ENSGT00940000162859.p.e #32 ENSGT00940000157530.a.h ENSGT00390000006988.fb ENSGT00940000157586.f.d ENSGT00940000166065.b.d ENSGT00390000013981.a.b ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a.c ENSGT00940000177729.b ENSGT00410000025882.b.d ENSGT00940000157392.p ENSGT00940000157882.j.a ENSGT00440000034918.g.b.a River trout MODERN SPECIES 20 ENSSTUG00000028788 CAMTA1 (ENSSTUG00000028830) dnajc11a (ENSSTUG00000028897) ENSSTUG00000028964 ENSSTUG00000028987 ENSSTUG00000029021 mfsd4ab (ENSSTUG00000029198) lemd1 (ENSSTUG00000029224) PM20D1 (ENSSTUG00000029293) NFASC (ENSSTUG00000029450) TAFA1 (ENSSTUG00000032373) #13 TAFA3 (ENSSTUG00000032388) UBA3 (ENSSTUG00000032430) #18 arl6ip5b (ENSSTUG00000032544) #19 FRMD4B (ENSSTUG00000032564) #21 MITF (ENSSTUG00000032663) #22 ENSSTUG00000033123 eif4e3 (ENSSTUG00000033133) #26 ENSSTUG00000033155 ppp4r2a (ENSSTUG00000033167) #32 guca1b (ENSSTUG00000033201) oard1 (ENSSTUG00000033221) SYT2 (ENSSTUG00000033226) ENSSTUG00000033247 ENSSTUG00000033255 ENSSTUG00000033272 GRM4 (ENSSTUG00000033384) ENSSTUG00000033448 ENSSTUG00000033452 ENSSTUG00000033459 nudt3a (ENSSTUG00000033477) Atlantic salmon MODERN SPECIES 6 dcj11 (ENSSSAG00000063552) ENSSSAG00000063523 ENSSSAG00000101232 ENSSSAG00000063513 ENSSSAG00000063211 mfsd4ab (ENSSSAG00000089305) lemd1 (ENSSSAG00000063177) ENSSSAG00000091134 ENSSSAG00000063131 ENSSSAG00000042361 ENSSSAG00000041990 ENSSSAG00000114328 #13 ENSSSAG00000041945 #18 PRAF3 (ENSSSAG00000041934) #19 FRMD4B (ENSSSAG00000041833) #21 MITF (ENSSSAG00000040900) #22 ENSSSAG00000040807 ENSSSAG00000040772 ENSSSAG00000040752 #32 ENSSSAG00000091686 ENSSSAG00000040652 ENSSSAG00000110375 ENSSSAG00000103431 ENSSSAG00000108728 ENSSSAG00000040570 ENSSSAG00000040424 ENSSSAG00000085116 ENSSSAG00000065547 ENSSSAG00000039652 SMIM29 (ENSSSAG00000093782) nudt3 (ENSSSAG00000039586) Oncorhynchus ANCESTRAL SPECIES 20 ENSGT00940000159408.q.a ENSGT00940000159408.q.b ENSGT00940000153675.a.b.b.c ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659.c ENSGT00940000157024.k.b.e ENSGT00940000164303.b.b ENSGT00940000162607.a.d #13 ENSGT00940000155644.b.a.b.d ENSGT00550000074831.l.c.b #18 ENSGT00390000008631.a.o.b.e #19 ENSGT00940000159731.e #20 ENSGT01020000230354.A.a.b.f #21 ENSGT00940000156326.a.a.b #22 ENSGT00940000165920.a.a.b ENSGT00940000155865.c.a.c #26 ENSGT00940000162859.p.e #32 ENSGT00940000157530.a.h ENSGT00390000006988.fb ENSGT00940000157586.f.d ENSGT00940000166065.b.d ENSGT00390000013981.a.b ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a.c ENSGT00940000177729.b ENSGT00410000025882.b.d ENSGT00940000157392.p ENSGT00940000157882.j.a ENSGT00440000034918.h Oncorhynchus_a ANCESTRAL SPECIES 7 ENSGT00940000159408.q.a ENSGT00940000159408.q.b ENSGT00940000153675.a.a.a.b.c.b ENSGT00940000153675.a.b.b.c ENSGT00940000165936 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659.c ENSGT00940000157024.k.b.e ENSGT00940000164303.b.b ENSGT00940000162607.a.d #13 ENSGT00550000074831.l.c.b #18 ENSGT00390000008631.a.o.b.e #19 ENSGT00940000159731.e #20 ENSGT01020000230354.A.a.b.f #21 ENSGT00940000156326.a.a.b #22 ENSGT00940000165920.a.a.b ENSGT00940000155865.c.a.c #26 ENSGT00940000162859.p.e #32 ENSGT00390000006988.fb ENSGT00940000157586.f.d ENSGT00940000166065.b.d ENSGT00390000013981.a.b ENSGT00940000160123.e.a ENSGT01030000234648.a.b.a.a.a.f.a.c ENSGT00940000177729.b ENSGT00410000025882.b.d ENSGT00940000157983.ab.a.b ENSGT00940000157882.j.a ENSGT00440000034918.g.b.a ENSGT00440000034918.h Chinook salmon MODERN SPECIES 7 ENSOTSG00005028559 ENSOTSG00005028558 ENSOTSG00005028545 ENSOTSG00005028162 mfsd4ab (ENSOTSG00005028156) lemd1 (ENSOTSG00005028149) PM20D1 (ENSOTSG00005028148) NFASC (ENSOTSG00005019091) slc16a7 (ENSOTSG00005019063) TAFA1 (ENSOTSG00005019061) #13 ENSOTSG00005019059 #15 UBA3 (ENSOTSG00005019024) #18 arl6ip5b (ENSOTSG00005019023) #19 LMOD3 (ENSOTSG00005019021) #20 FRMD4B (ENSOTSG00005019020) #21 MITF (ENSOTSG00005018913) #22 foxp1a (ENSOTSG00005018911) ENSOTSG00005018909 ppp4r2a (ENSOTSG00005018903) #32 eif4e3 (ENSOTSG00005018901) #26 oard1 (ENSOTSG00005018898) SYT2 (ENSOTSG00005018897) ENSOTSG00005018890 ENSOTSG00005018887 ENSOTSG00005018876 GRM4 (ENSOTSG00005018874) ENSOTSG00005018873 SMIM29 (ENSOTSG00005018872) nudt3a (ENSOTSG00005018871) rps10 (ENSOTSG00005018869) pacsin1a (ENSOTSG00005018660) Coho salmon MODERN SPECIES 8 ENSOKIG00005043310 ENSOKIG00005043281 ENSOKIG00005043108 mfsd4ab (ENSOKIG00005042966) lemd1 (ENSOKIG00005042926) ENSOKIG00005042912 ENSOKIG00005042824 NFASC (ENSOKIG00005040500) slc16a7 (ENSOKIG00005040354) TAFA1 (ENSOKIG00005040334) #13 ENSOKIG00005040314 #15 UBA3 (ENSOKIG00005040230) #18 ARL6IP5 (ENSOKIG00005040201) #19 LMOD3 (ENSOKIG00005040078) #20 FRMD4B (ENSOKIG00005039862) #21 MITF (ENSOKIG00005039723) #22 foxp1a (ENSOKIG00005039693) ENSOKIG00005039684 ENSOKIG00005039672 EIF4E3 (ENSOKIG00005039602) #26 ppp4r2a (ENSOKIG00005039499) #32 OARD1 (ENSOKIG00005039408) SYT2 (ENSOKIG00005039372) ENSOKIG00005039333 ENSOKIG00005039316 ENSOKIG00005038951 GRM4 (ENSOKIG00005038876) ENSOKIG00005038860 SMIM29 (ENSOKIG00005038848) ENSOKIG00005038826 nudt3a (ENSOKIG00005038815) Rainbow trout MODERN SPECIES 30 ENSOMYG00000045900 mfsd4ab (ENSOMYG00000045845) lemd1 (ENSOMYG00000045832) ENSOMYG00000045818 ENSOMYG00000049192 ENSOMYG00000043002 ENSOMYG00000042677 ENSOMYG00000053967 ENSOMYG00000042668 #13 ENSOMYG00000042664 UBA3 (ENSOMYG00000042639) #18 ARL6IP5 (ENSOMYG00000042615) #19 LMOD3 (ENSOMYG00000042609) #20 FRMD4B (ENSOMYG00000042574) #21 ENSOMYG00000059232 MITF (ENSOMYG00000042524) #22 foxp1a (ENSOMYG00000042498) ENSOMYG00000042490 ENSOMYG00000042478 #26 ppp4r2a (ENSOMYG00000042472) #32 ENSOMYG00000042446 ENSOMYG00000042428 ENSOMYG00000064683 ENSOMYG00000042422 ENSOMYG00000068047 ENSOMYG00000076775 ENSOMYG00000042405 ENSOMYG00000042400 ENSOMYG00000042384 ENSOMYG00000058885 ENSOMYG00000042365 Huchen MODERN SPECIES 271 ENSHHUG00000017731 ENSHHUG00000017638 ENSHHUG00000017531 mfsd4ab (ENSHHUG00000017498) lemd1 (ENSHHUG00000017451) ENSHHUG00000017435 NFASC (ENSHHUG00000013247) ENSHHUG00000013215 ENSHHUG00000013198 TAFA1 (ENSHHUG00000013187) #13 TAFA3 (ENSHHUG00000013176) UBA3 (ENSHHUG00000013068) #18 arl6ip5b (ENSHHUG00000013029) #19 LMOD3 (ENSHHUG00000013014) #20 FRMD4B (ENSHHUG00000012885) #21 MITF (ENSHHUG00000012399) #22 foxp1a (ENSHHUG00000012389) eif4e3 (ENSHHUG00000012347) #26 ppp4r2a (ENSHHUG00000012326) #32 guca1b (ENSHHUG00000012323) oard1 (ENSHHUG00000012320) SYT2 (ENSHHUG00000012310) ENSHHUG00000012279 ENSHHUG00000012274 ENSHHUG00000012254 Northern pike MODERN SPECIES 11 ENSELUG00000020459 mfsd4ab (ENSELUG00000000895) lemd1 (ENSELUG00000020378) ENSELUG00000020326 pm20d1.2 (ENSELUG00000001153) ENSELUG00000020287 NFASC (ENSELUG00000020244) ENSELUG00000020122 slc16a7 (ENSELUG00000020094) TAFA1 (ENSELUG00000020069) #13 TAFA3 (ENSELUG00000001047) UBA3 (ENSELUG00000020016) #18 arl6ip5b (ENSELUG00000019922) #19 LMOD3 (ENSELUG00000000874) #20 FRMD4B (ENSELUG00000019897) #21 MITF (ENSELUG00000019860) #22 ENSELUG00000019786 eif4e3 (ENSELUG00000019727) #26 ppp4r2a (ENSELUG00000019694) #32 guca1b (ENSELUG00000019659) oard1 (ENSELUG00000019637) SYT2 (ENSELUG00000019591) ENSELUG00000019559 ENSELUG00000019546 ENSELUG00000019514 GRM4 (ENSELUG00000019340) hmga1a (ENSELUG00000019318) ENSELUG00000019304 nudt3a (ENSELUG00000019268) pacsin1a (ENSELUG00000019245) SPDEF (ENSELUG00000019175) Otomorpha ANCESTRAL SPECIES 35 ENSGT00980000202345 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00650000094944 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00730000111641.a #23 ENSGT00940000165920.a ENSGT00940000155865.c.a #26 Otophysi ANCESTRAL SPECIES 443 ENSGT00950000182945.b.a.a.a.b.b.a.b ENSGT00940000160369 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00730000111641.a #23 Characiphysae ANCESTRAL SPECIES 73 ENSGT00940000159695 ENSGT00940000159853 ENSGT00940000157379 ENSGT00740000116961 ENSGT00940000155218.A.d.b ENSGT00940000155218.A.d.a ENSGT00940000161589 ENSGT00940000165182.c ENSGT00390000005939.a.b.a ENSGT00940000163813 ENSGT00940000157506.f ENSGT00390000013867.bc.b.a ENSGT00950000182945.b.a.a.a.b.b.a.b ENSGT00940000160369 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000161281 ENSGT00940000171106 ENSGT00980000198821 ENSGT00940000163428.a.a.b ENSGT00940000159065.a ENSGT00950000183062.a.b.b.a ##33 ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00940000157025 ENSGT00940000167901 ENSGT00940000158152.a.b ENSGT00940000164224.b ENSGT00940000157504.c.a ENSGT00390000007725.A.b.d Channel catfish MODERN SPECIES 6 adtrp1 (ENSIPUG00000016793) ENSIPUG00000016802 ENSIPUG00000016820 arl6ip5b (ENSIPUG00000016840) #19 srsf6a (ENSIPUG00000016856) L3MBTL1 (ENSIPUG00000016883) sgk2 (ENSIPUG00000016908) NCOA3 (ENSIPUG00000016983) zgc:113278 (ENSIPUG00000017042) ENSIPUG00000017061 aar2 (ENSIPUG00000017068) ENSIPUG00000017091 b4galt5 (ENSIPUG00000017103) SL9A8 (ENSIPUG00000017150) smpd2a (ENSIPUG00000017284) mitfb (ENSIPUG00000017300) #22 tmem106c (ENSIPUG00000017323) ENSIPUG00000017333 twist3 (ENSIPUG00000017339) ENSIPUG00000017353 Klf15 (ENSIPUG00000017412) ENSIPUG00000017416 ENSIPUG00000017426 CHST13 (ENSIPUG00000017433) ndnl2 (ENSIPUG00000017446) ID1 (ENSIPUG00000017459) HM13 (ENSIPUG00000017475) ENSIPUG00000017531 GDI1 (ENSIPUG00000017551) ENSIPUG00000017577 pacsin1a (ENSIPUG00000017587) Characiphysae_b ANCESTRAL SPECIES 141 ENSGT00940000156010.db ENSGT00940000159695 ENSGT00940000159853 ENSGT00940000157379 ENSGT00740000116961 ENSGT00940000155218.A.d.a ENSGT00940000161589 ENSGT00940000165182.c ENSGT00390000005939.a.b.a ENSGT00940000163813 ENSGT00940000157506.f ENSGT00390000013867.bc.b.a ENSGT00950000182945.b.a.a.a.b.b.a.b ENSGT00940000160369 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000161281 ENSGT00940000171106 ENSGT00980000198821 ENSGT00940000163428.a.a.b ENSGT00940000159065.a ENSGT00950000183062.a.b.b.a ##33 ENSGT00940000155806.c.a ENSGT00390000013228 ENSGT00600000084428.a ENSGT00940000157025 ENSGT00940000167901 ENSGT00940000158152.a.b ENSGT00940000164224.b ENSGT00940000157504.c.a ENSGT00390000007725.A.b.d Electric eel MODERN SPECIES 544 ENSEEEG00000001141 samhd1 (ENSEEEG00000001142) rhoac (ENSEEEG00000001146) ENSEEEG00000001150 FRMD4B (ENSEEEG00000001153) #21 mitfb (ENSEEEG00000001154) #22 tmem106c (ENSEEEG00000001155) ENSEEEG00000001157 ENSEEEG00000001160 twist3 (ENSEEEG00000001164) ENSEEEG00000001165 PDZD4 (ENSEEEG00000001166) ##33 Characoidei ANCESTRAL SPECIES 215 ENSGT00390000011620.a.a.b.f ENSGT00940000156010.db ENSGT00940000159695 ENSGT00940000159853 ENSGT00940000157379 ENSGT00940000155218.A.d.a ENSGT00940000161589 ENSGT00940000165182.c ENSGT00390000005939.a.b.a ENSGT00940000163813 ENSGT00940000157506.f ENSGT00390000013867.bc.b.a ENSGT00950000182945.b.a.a.a.b.b.a.b ENSGT00940000160369 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00940000161281 ENSGT00940000171106 ENSGT00980000198821 ENSGT00940000163428.a.a.b ENSGT00940000159065.a Red-bellied piranha MODERN SPECIES 257 ENSPNAG00000001647 ENSPNAG00000001615 irf10 (ENSPNAG00000011220) ENSPNAG00000011205 samhd1 (ENSPNAG00000001546) samhd1 (ENSPNAG00000001533) rhoac (ENSPNAG00000001518) RBM10 (ENSPNAG00000011074) ENSPNAG00000001505 #21 mitfb (ENSPNAG00000011030) #22 tmem106c (ENSPNAG00000010989) ENSPNAG00000010936 ENSPNAG00000010915 twist3 (ENSPNAG00000010892) HDAC7 (ENSPNAG00000010856) ENSPNAG00000010835 KCNA10 (ENSPNAG00000010799) kcna2b (ENSPNAG00000010786) ENSPNAG00000010782 ENSPNAG00000010776 Cyprinoidei ANCESTRAL SPECIES 228 ENSGT00940000161589 ENSGT00940000155218.A.d.a ENSGT00940000155218.A.d.b ENSGT00950000182945.b.a.a.a.b.b.a.b ENSGT00940000160369 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.a.a #22 ENSGT00730000111641.a #23 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 168 ENSGT00940000162200.a.a ENSGT00940000153467.a.a.fc.a ENSGT00390000010101 ENSGT00950000183204.b.b.a.h ENSGT00940000157064.a.b.b.a.a.q ENSGT00390000004674.i.b.b ENSGT00940000157607.d ENSGT00550000075121.b ENSGT01050000244939.a.a.b.a.b.d ENSGT00940000161589.c ENSGT00940000155218.A.d.a.e ENSGT00940000155218.A.d.b.a ENSGT00950000182945.b.a.a.a.b.b.a.b ENSGT00940000160369.i ENSGT01020000230354.A.a.b.a #21 ENSGT00940000156326.a.a.c #22 ENSGT00730000111641.a #23 ENSGT00940000161281.j ENSGT00940000171106.a ENSGT00980000198821.b ENSGT00940000163428.a.a.b ENSGT00940000159065.a.a ENSGT00950000183062.a.b.b.a.d ##33 ENSGT00390000013228.g ENSGT00600000084428.a.h ENSGT00940000167901.a ENSGT00940000164224.b.a ENSGT00940000157504.c.a.b ENSGT00390000007725.A.b.d.b ENSGT00940000160210.d.a.c ENSGT00940000158688.d.b.b Goldfish MODERN SPECIES 15 stxbp3 (ENSCARG00000009436) TGM1 (ENSCARG00000009370) ENSCARG00000009362 ENSCARG00000009337 ENSCARG00000009335 ENSCARG00000009331 ENSCARG00000009320 ENSCARG00000009318 ENSCARG00000009315 ENSCARG00000009312 ENSCARG00000009290 ENSCARG00000009284 rhoac (ENSCARG00000009276) RBM10 (ENSCARG00000009143) FRMD4B (ENSCARG00000009066) #21 mitfb (ENSCARG00000008986) #22 MDFIC2 (ENSCARG00000008974) #23 tmem106c (ENSCARG00000008963) ENSCARG00000008956 ENSCARG00000008949 ENSCARG00000008939 ENSCARG00000008590 PDZD4 (ENSCARG00000008537) ##33 ANKS1A (ENSCARG00000005383) sla2b (ENSCARG00000005263) gss (ENSCARG00000005241) ENSCARG00000005233 Cyprininae_a ANCESTRAL SPECIES 79 ENSGT00940000153467.a.a.fc.a ENSGT00390000010101 ENSGT00950000183204.b.b.a.h ENSGT00940000157064.a.b.b.a.a.q.b ENSGT00390000004674.i.b.b ENSGT00940000157607.d ENSGT00550000075121.b ENSGT01050000244939.a.a.b.a.b.d ENSGT00940000163807 ENSGT00940000161589.c ENSGT00940000155218.A.d.a.e ENSGT00940000155218.A.d.b.a ENSGT00950000182945.b.a.a.a.b.b.a.b ENSGT00940000160369.i ENSGT01020000230354.A.a.b.a #21 ENSGT00940000156326.a.a.c #22 ENSGT00940000161281.j ENSGT00940000171106.a ENSGT00980000198821.b.a.a ENSGT00940000159065.a.a ENSGT00950000183062.a.b.b.a.d ##33 ENSGT00940000155806.c.a.e ENSGT00390000013228.g ENSGT00600000084428.a.h ENSGT00940000164224.b.a ENSGT00940000157504.c.a.b ENSGT00390000007725.A.b.d.b ENSGT00940000160210.d.a.c ENSGT00940000158688.d.b.b ENSGT00940000159534.e.a ENSGT00940000155662.f.b Common carp reference MODERN SPECIES 49 stxbp3 (ENSCCRG00000044037) rabggta (ENSCCRG00000044086) ENSCCRG00000080140 ENSCCRG00000036429 ENSCCRG00000081346 ENSCCRG00000064033 ENSCCRG00000063632 ENSCCRG00000036383 ENSCCRG00000079675 ENSCCRG00000023480 ENSCCRG00000051780 rhoac (ENSCCRG00000080396) ENSCCRG00000056339 ENSCCRG00000028008 ENSCCRG00000027847 #21 mitfb (ENSCCRG00000041989) #22 ENSCCRG00000073038 ENSCCRG00000051593 ENSCCRG00000080654 twist3 (ENSCCRG00000076902) ENSCCRG00000025153 ENSCCRG00000038509 ENSCCRG00000066204 ##33 ANKS1A (ENSCCRG00000070308) taf11 (ENSCCRG00000016117) BLTP3A (ENSCCRG00000046782) ap4b1 (ENSCCRG00000005638) ENSCCRG00000012328 ENSCCRG00000070731 ENSCCRG00000030071 KCNA3 (ENSCCRG00000054021) Golden-line barbel MODERN SPECIES 664 TGM1 (ENSSGRG00000034142) zgc:113423 (ENSSGRG00000034262) ENSSGRG00000034265 ENSSGRG00000034267 f3a (ENSSGRG00000034269) rhoac (ENSSGRG00000034272) RBM10 (ENSSGRG00000034311) ENSSGRG00000034314 #21 mitfb (ENSSGRG00000034320) #22 tmem106c (ENSSGRG00000034322) ENSSGRG00000034323 ENSSGRG00000034326 HDAC7 (ENSSGRG00000034327) Cyprininae ANCESTRAL SPECIES 495 ENSGT00940000160369.j ENSGT01020000230354.A.a.b.b #21 ENSGT00940000156326.a.a.d #22 ENSGT00940000159065.a.b ENSGT00950000183062.a.b.b.a.c ##33 ENSGT00940000155806.c.a ENSGT00390000013228.h ENSGT00600000084428.a.g ENSGT00940000157025 ENSGT00940000167901.b ENSGT00940000158152.a.b ENSGT00940000164224.b.b ENSGT00940000157504.c.a.a ENSGT00390000007725.A.b.d.a ENSGT00940000158688.d.a ENSGT00940000159534.e.b ENSGT00940000155662.f.a ENSGT00940000162211.f Goldfish MODERN SPECIES 1896 rhoac (ENSCARG00000039632) ENSCARG00000039658 FRMD4B (ENSCARG00000039697) #21 mitfb (ENSCARG00000039919) #22 MDFIC2 (ENSCARG00000039974) #23 ENSCARG00000039982 twist3 (ENSCARG00000040045) HDAC7 (ENSCARG00000040066) ENSCARG00000040305 PDZD4 (ENSCARG00000040312) ##33 ANKS1A (ENSCARG00000040373) taf11 (ENSCARG00000041459) BLTP3A (ENSCARG00000041502) ap4b1 (ENSCARG00000042025) zgc:101663 (ENSCARG00000042036) ENSCARG00000042046 TSHB (ENSCARG00000042149) slc25a55b (ENSCARG00000042257) ENSCARG00000042304 Cyprininae_a ANCESTRAL SPECIES 252 ENSGT00940000160369.j ENSGT01020000230354.A.a.b.b #21 ENSGT00940000156326.a.a.d #22 ENSGT00730000111641.a #23 ENSGT00940000161281.i ENSGT00940000171106.b ENSGT00980000198821.b.b ENSGT00940000163428.a.a.b ENSGT00940000159065.a.b ENSGT00950000183062.a.b.b.a.c ##33 ENSGT00940000155806.c.a.f ENSGT00390000013228.h ENSGT00600000084428.a.g ENSGT00940000157025 ENSGT00940000167901.b ENSGT00940000158152.a.b ENSGT00940000164224.b.b ENSGT00940000157504.c.a.a Common carp reference MODERN SPECIES 11 ENSCCRG00000073881 fbxo30b (ENSCCRG00000042336) ENSCCRG00000042350 ENSCCRG00000002753 stxbp3 (ENSCCRG00000002710) rabggta (ENSCCRG00000036441) ENSCCRG00000063372 ENSCCRG00000070914 ENSCCRG00000079858 ENSCCRG00000065319 ENSCCRG00000040539 ENSCCRG00000051760 rhoac (ENSCCRG00000073282) ENSCCRG00000051777 FRMD4B (ENSCCRG00000051775) #21 mitfb (ENSCCRG00000079523) #22 MDFIC2 (ENSCCRG00000041976) #23 ENSCCRG00000041973 ENSCCRG00000025161 ENSCCRG00000076629 twist3 (ENSCCRG00000063490) ENSCCRG00000061915 ENSCCRG00000058581 ENSCCRG00000078651 ENSCCRG00000038515 ##33 ANKS1A (ENSCCRG00000038548) taf11 (ENSCCRG00000024971) BLTP3A (ENSCCRG00000024993) ap4b1 (ENSCCRG00000072374) zgc:101663 (ENSCCRG00000005641) TSHB (ENSCCRG00000026356) Golden-line barbel MODERN SPECIES 493 ENSSGRG00000045362 FRMD4B (ENSSGRG00000045361) #21 mitfb (ENSSGRG00000045265) #22 ENSSGRG00000045260 #23 tmem106c (ENSSGRG00000045259) ENSSGRG00000045258 ENSSGRG00000045257 twist3 (ENSSGRG00000045256) ENSSGRG00000045255 PDZD4 (ENSSGRG00000045253) ##33 ENSSGRG00000045252 ANKS1A (ENSSGRG00000045201) taf11 (ENSSGRG00000045195) BLTP3A (ENSSGRG00000045193) ap4b1 (ENSSGRG00000045192) zgc:101663 (ENSSGRG00000045191) TSHB (ENSSGRG00000045190) slc25a55b (ENSSGRG00000045189) Zebrafish MODERN SPECIES 15 fbxo30b (ENSDARG00000019311) EPM2A (ENSDARG00000059044) ENSDARG00000098793 UTRN (ENSDARG00000100222) psmb11b (ENSDARG00000068086) slc34a2b (ENSDARG00000036864) ENSDARG00000093367 zgc:113423 (ENSDARG00000058978) ENSDARG00000093496 ENSDARG00000078404 ENSDARG00000087641 rhoac (ENSDARG00000116058) ENSDARG00000077400 FRMD4B (ENSDARG00000076496) #21 ENSDARG00000101583 mitfb (ENSDARG00000037833) #22 irf10 (ENSDARG00000027658) l1camb (ENSDARG00000015025) ENSDARG00000111792 ogfr (ENSDARG00000037837) kcnk15 (ENSDARG00000077371) lsm14b (ENSDARG00000025386) MTG2 (ENSDARG00000063574) samhd1 (ENSDARG00000071288) col9a3 (ENSDARG00000037845) hm13 (ENSDARG00000037846) ENSDARG00000057907 ENSDARG00000059202 slc25a55b (ENSDARG00000013749) ENSDARG00000110110 zgc:101663 (ENSDARG00000037852) Osteoglossocephalai ANCESTRAL SPECIES 85 ENSGT00940000156409 ENSGT01030000234549.a.a.a.a.a.b.b.a ENSGT00940000155820.a #8 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653 #11 ENSGT00940000164303.b.a ENSGT00390000010170.a.a #12 ENSGT00940000162607.b #13 ENSGT00940000159882 #15 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831.k #18 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 ENSGT00940000164786.a ENSGT00940000158442 Osteoglossiformes ANCESTRAL SPECIES 54 ENSGT00550000074950 #9 ENSGT00940000158502 #10 ENSGT00940000158653.i #11 ENSGT00940000158653.j #11 ENSGT00940000164303.b.a ENSGT00390000010170.a.a #12 ENSGT00940000162607.b #13 ENSGT00940000159882 #15 ENSGT00940000159508.a ENSGT00940000165407 ENSGT00940000156493 #16 ENSGT00390000010697 #17 ENSGT00550000074831.k #18 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000165309 ENSGT00730000111641 #23 ENSGT00940000165920.b ENSGT00940000155865.d #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a.b #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A.a ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 ENSGT00940000164786.a Asian bonytongue MODERN SPECIES 14 ADAMTS9 (ENSSFOG00015017953) rho (ENSSFOG00015017939) magi1b (ENSSFOG00015017375) #8 slc25a26 (ENSSFOG00015017281) #9 LRIG1 (ENSSFOG00015017174) #10 kbtbd8 (ENSSFOG00015032441) #11 ENSSFOG00015017078 suclg2 (ENSSFOG00015017035) #12 TAFA1 (ENSSFOG00015017007) #13 tafa4b (ENSSFOG00015016988) EOGT (ENSSFOG00015016943) #16 tmf1 (ENSSFOG00015016904) #17 uba3 (ENSSFOG00015016867) #18 arl6ip5a (ENSSFOG00015025753) #19 FRMD4B (ENSSFOG00015016690) #21 mitfa (ENSSFOG00015016521) #22 zgc:113054 (ENSSFOG00015016449) mdfic2 (ENSSFOG00015016439) #23 foxp1b (ENSSFOG00015016318) EIF4E3 (ENSSFOG00015016279) #26 gpr27 (ENSSFOG00015030628) #27 prok2 (ENSSFOG00015016263) RYBP (ENSSFOG00015025952) #29 shq1 (ENSSFOG00015016241) #30 gxylt2 (ENSSFOG00015016186) #31 ppp4r2b (ENSSFOG00015016134) #32 ENSSFOG00015029341 pdzrn3b (ENSSFOG00015016102) #33 ENSSFOG00015016050 ##37 ENSSFOG00015015929 ENSSFOG00015015845 ##37 P. kingsleyae MODERN SPECIES 49 prickle2b (ENSPKIG00000023283) ADAMTS9 (ENSPKIG00000023235) magi1b (ENSPKIG00000022734) #8 ENSPKIG00000022646 #9 LRIG1 (ENSPKIG00000022604) #10 kbtbd8 (ENSPKIG00000022588) #11 ENSPKIG00000022563 ENSPKIG00000022546 suclg2 (ENSPKIG00000022512) #12 TAFA1 (ENSPKIG00000022479) #13 TAFA4 (ENSPKIG00000022452) #15 EOGT (ENSPKIG00000022411) #16 tmf1 (ENSPKIG00000022370) #17 uba3 (ENSPKIG00000022293) #18 FRMD4B (ENSPKIG00000022214) #21 mitfa (ENSPKIG00000021897) #22 MDFIC2 (ENSPKIG00000021752) #23 foxp1b (ENSPKIG00000021659) EIF4E3 (ENSPKIG00000021599) #26 gpr27 (ENSPKIG00000021581) #27 prok2 (ENSPKIG00000021574) rybpb (ENSPKIG00000021549) #29 shq1 (ENSPKIG00000021517) #30 gxylt2 (ENSPKIG00000021503) #31 pdzrn3b (ENSPKIG00000021461) #33 ENSPKIG00000021421 ##37 ENSPKIG00000021316 ENSPKIG00000021268 ##37 cntn4 (ENSPKIG00000021216) EPB41L1 (ENSPKIG00000020949) ENSPKIG00000020683 Clupeocephala ANCESTRAL SPECIES 20 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Otomorpha ANCESTRAL SPECIES 112 ENSGT00530000063849.A.a ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 ENSGT00940000167414 Clupeiformes ANCESTRAL SPECIES 27 ENSGT00940000158315 ENSGT00390000015972 ENSGT00940000156561.a.b.b ENSGT00950000182897.A ENSGT00940000154281 ENSGT00940000156107.e.b ENSGT00950000183080.a.a.f ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 ENSGT00940000164786.a ENSGT00840000129953 ENSGT00940000165103.b Atlantic herring MODERN SPECIES 21 eif6 (ENSCHAG00000012670) ESYT1 (ENSCHAG00000012701) zc3h10 (ENSCHAG00000013378) ENSCHAG00000013385 pa2g4a (ENSCHAG00000013406) ERBB3 (ENSCHAG00000013607) ARF3 (ENSCHAG00000017812) bhlhe40 (ENSCHAG00000017831) ITPR1 (ENSCHAG00000018029) setmar (ENSCHAG00000025278) lrrn1 (ENSCHAG00000025281) ENSCHAG00000025284 trnt1 (ENSCHAG00000025289) arl6ip5a (ENSCHAG00000025298) #19 FRMD4B (ENSCHAG00000025306) #21 mitfa (ENSCHAG00000025374) #22 zgc:113054 (ENSCHAG00000025384) foxp1b (ENSCHAG00000025407) gpr27 (ENSCHAG00000025654) #27 prok2 (ENSCHAG00000025655) RYBP (ENSCHAG00000025660) #29 shq1 (ENSCHAG00000025662) #30 gxylt2 (ENSCHAG00000025668) #31 ppp4r2b (ENSCHAG00000025680) #32 pdzrn3b (ENSCHAG00000025689) #33 ENSCHAG00000025710 ENSCHAG00000025815 ##37 ENSCHAG00000026930 ENSCHAG00000027584 ##37 cntn4 (ENSCHAG00000027695) rbm19 (ENSCHAG00000027761) Denticle herring MODERN SPECIES 3 eif6 (ENSDCDG00000025528) ESYT1 (ENSDCDG00000024805) zc3h10 (ENSDCDG00000024787) pa2g4a (ENSDCDG00000024781) ERBB3 (ENSDCDG00000013741) arf3b (ENSDCDG00000013288) bhlhe40 (ENSDCDG00000013282) ENSDCDG00000013280 ENSDCDG00000003598 setmar (ENSDCDG00000002977) lrrn1 (ENSDCDG00000002962) ENSDCDG00000034996 trnt1 (ENSDCDG00000034993) arl6ip5a (ENSDCDG00000034990) #19 FRMD4B (ENSDCDG00000034978) #21 mitfa (ENSDCDG00000034964) #22 zgc:113054 (ENSDCDG00000034956) foxp1b (ENSDCDG00000034762) gpr27 (ENSDCDG00000034737) #27 prok2 (ENSDCDG00000034735) rybpb (ENSDCDG00000034734) #29 shq1 (ENSDCDG00000034732) #30 gxylt2 (ENSDCDG00000034731) #31 ppp4r2b (ENSDCDG00000034728) #32 pdzrn3b (ENSDCDG00000034720) #33 ENSDCDG00000034577 ##37 ENSDCDG00000034312 ENSDCDG00000034027 ##37 cntn4 (ENSDCDG00000032350) rbm19 (ENSDCDG00000032266) epha2a (ENSDCDG00000032258) Otophysi ANCESTRAL SPECIES 68 ENSGT00940000166798 ENSGT01080000257376.a.b.b.h.i.a.a ENSGT00940000156703.e.b ENSGT00940000160395 ENSGT00940000157717 ENSGT00940000154861.n.b ENSGT00940000174943 ENSGT01030000235084 ENSGT00390000004490 ENSGT00390000014365 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 ENSGT00940000167414 Characiphysae ANCESTRAL SPECIES 104 ENSGT00940000166798 ENSGT00940000156468.e ENSGT00940000157842.a ENSGT00940000160395 ENSGT00940000157717 ENSGT00940000154861.n.b ENSGT00940000174943 ENSGT01030000235084 ENSGT00390000004490 ENSGT00390000014365 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 Characiphysae_b ANCESTRAL SPECIES 114 ENSGT00940000166798 ENSGT00940000156468.e ENSGT00940000157842.a ENSGT00940000160395 ENSGT00940000157717 ENSGT00940000154861.n.b ENSGT00940000174943 ENSGT01030000235084 ENSGT00390000004490 ENSGT00390000014365 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 Characoidei ANCESTRAL SPECIES 234 ENSGT00940000178778.a ENSGT00940000157842.a ENSGT00940000160395 ENSGT00940000157717 ENSGT00940000154861.n.b ENSGT00940000174943 ENSGT01030000235084 ENSGT00390000004490 ENSGT00390000014365 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b Red-bellied piranha MODERN SPECIES 20 ENSPNAG00000007888 ENSPNAG00000007895 gnat1 (ENSPNAG00000007906) edem1 (ENSPNAG00000007922) arl8ba (ENSPNAG00000007931) tnfrsf18 (ENSPNAG00000007944) ENSPNAG00000007949 tcta (ENSPNAG00000007958) glyctk (ENSPNAG00000000549) lrrn1 (ENSPNAG00000007961) ENSPNAG00000000557 trnt1 (ENSPNAG00000000565) arl6ip5a (ENSPNAG00000000571) #19 FRMD4B (ENSPNAG00000008017) #21 mitfa (ENSPNAG00000008049) #22 ENSPNAG00000000624 zgc:113054 (ENSPNAG00000008064) mdfic2 (ENSPNAG00000000641) #23 foxp1b (ENSPNAG00000008102) limk1a (ENSPNAG00000008141) ENSPNAG00000007157 apoa1b (ENSPNAG00000000734) TBX10 (ENSPNAG00000008173) bace1 (ENSPNAG00000008182) si:ch211-229n2.7 (ENSPNAG00000008186) ENSPNAG00000000784 ENSPNAG00000008231 ENSPNAG00000000855 ENSPNAG00000008321 ENSPNAG00000008333 Electric eel MODERN SPECIES 36 ENSEEEG00000004072 ENSEEEG00000004083 trnt1 (ENSEEEG00000004093) arl6ip5a (ENSEEEG00000004098) #19 FRMD4B (ENSEEEG00000004100) #21 mitfa (ENSEEEG00000004103) #22 foxp1b (ENSEEEG00000004114) gpr27 (ENSEEEG00000004343) #27 prok2 (ENSEEEG00000004344) rybpb (ENSEEEG00000004345) #29 shq1 (ENSEEEG00000004346) #30 gxylt2 (ENSEEEG00000004348) #31 ppp4r2b (ENSEEEG00000004352) #32 pdzrn3b (ENSEEEG00000004359) #33 ENSEEEG00000004372 ##37 mettl9 (ENSEEEG00000004528) KDELR2 (ENSEEEG00000004529) DAGLB (ENSEEEG00000004532) SPAG9 (ENSEEEG00000004540) tob1b (ENSEEEG00000004578) WFIKKN1 (ENSEEEG00000004580) Channel catfish MODERN SPECIES 2 ENSIPUG00000000839 CAMKV (ENSIPUG00000000859) ENSIPUG00000000864 gnat1 (ENSIPUG00000000881) EDEM1 (ENSIPUG00000000906) arl8ba (ENSIPUG00000000931) tnfrsf18 (ENSIPUG00000000945) ENSIPUG00000000948 tcta (ENSIPUG00000000955) glyctk (ENSIPUG00000000957) lrrn1 (ENSIPUG00000000963) ENSIPUG00000000965 trnt1 (ENSIPUG00000000971) Arl6ip5 (ENSIPUG00000000996) #19 frmd4b (ENSIPUG00000001007) #21 mitf (ENSIPUG00000001061) #22 mdfic2 (ENSIPUG00000001077) #23 foxp1 (ENSIPUG00000001094) ENSIPUG00000001179 gpr27 (ENSIPUG00000001194) #27 PROK1 (ENSIPUG00000001210) rybpb (ENSIPUG00000001221) #29 shq1 (ENSIPUG00000001247) #30 gxylt2 (ENSIPUG00000001272) #31 ppp4r2 (ENSIPUG00000001286) #32 pdzrn3 (ENSIPUG00000001304) #33 ENSIPUG00000001347 ##37 or90h4 (ENSIPUG00000001395) ENSIPUG00000001400 or90a1 (ENSIPUG00000001407) or90a1 (ENSIPUG00000001430) Cyprinoidei ANCESTRAL SPECIES 2 ENSGT00940000166798 ENSGT01080000257376.a.b.b.h.i.a.a ENSGT00940000156703.e.b ENSGT00940000160395 ENSGT00940000157717 ENSGT00940000154861.n.b ENSGT00940000174943 ENSGT01030000235084 ENSGT00390000004490 ENSGT00390000014365 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b.a #23 ENSGT00940000165920.b ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 ENSGT00940000167414 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 480 ENSGT00940000156468.e.f ENSGT00940000166798.a ENSGT01080000257376.a.b.b.h.i.a.a ENSGT00940000156703.e.b.e ENSGT00940000160395.a ENSGT00940000157717.d ENSGT00940000154861.n.b.a.b ENSGT01030000235084.b ENSGT00390000004490.f ENSGT00390000014365.d ENSGT00940000157154.d.c ENSGT01050000244882.b.c.a.a.a ENSGT00390000009678.a ENSGT00390000008631.a.o.a.j #19 ENSGT01020000230354.A.a.a.a #21 ENSGT00940000156326.a.b.a #22 ENSGT00940000165309.c ENSGT00730000111641.b.b #23 Goldfish MODERN SPECIES 24 ENSCARG00000010633 CAMKV (ENSCARG00000010685) ENSCARG00000010769 sema3fa (ENSCARG00000010812) gnat1 (ENSCARG00000011343) edem1 (ENSCARG00000011378) arl8ba (ENSCARG00000011570) ENSCARG00000011579 tcta (ENSCARG00000011582) glyctk (ENSCARG00000011589) lrrn1 (ENSCARG00000011594) ENSCARG00000011597 trnt1 (ENSCARG00000011606) arl6ip5a (ENSCARG00000011622) #19 FRMD4B (ENSCARG00000011641) #21 mitfa (ENSCARG00000011744) #22 zgc:113054 (ENSCARG00000011990) MDFIC2 (ENSCARG00000012024) #23 foxp1b (ENSCARG00000012040) brinp3a.1 (ENSCARG00000012218) rgs8 (ENSCARG00000012226) rgs16 (ENSCARG00000012232) rgs5a (ENSCARG00000012235) rgs4 (ENSCARG00000012238) ENSCARG00000012255 ENSCARG00000012440 uhmk1 (ENSCARG00000012456) uap1 (ENSCARG00000012495) DDR2 (ENSCARG00000012545) hsd17b7 (ENSCARG00000013060) serbp1a (ENSCARG00000013066) Cyprininae_a ANCESTRAL SPECIES 68 ENSGT01080000257376.a.b.b.h.i.a.a.a.b ENSGT00940000156703.e.b.e ENSGT00940000160395.a ENSGT00940000157717.d ENSGT00940000154861.n.b.a.b ENSGT01030000235084.b ENSGT00940000154861.n.b.b ENSGT00940000174943.b ENSGT00390000004490.f ENSGT00390000014365.d ENSGT00940000157154.d.c ENSGT01050000244882.b.c.a.a.a ENSGT00390000009678.a ENSGT00390000008631.a.o.a.j #19 ENSGT01020000230354.A.a.a.a #21 ENSGT00940000156326.a.b.a #22 ENSGT00940000165309.c ENSGT00730000111641.b.b #23 ENSGT00940000165920.b.b ENSGT00890000139436.A.a.c #27 ENSGT00940000167138.c ENSGT00390000013995.b.a.o.a #29 ENSGT00390000007605.c #30 ENSGT00940000158065.a.b #31 ENSGT00940000162859.o.b #32 ENSGT00950000183062.a.a.a.k.b #33 ENSGT00940000155198.A.d ##37 ENSGT00940000165371.a.b ENSGT00940000167414.b ENSGT00940000164786.a.a ENSGT00840000129953.e Common carp reference MODERN SPECIES 16 ip6k2a (ENSCCRG00000076362) ENSCCRG00000006833 ENSCCRG00000033964 ENSCCRG00000022644 sema3fa (ENSCCRG00000052379) gnat1 (ENSCCRG00000052368) edem1 (ENSCCRG00000052367) arl8ba (ENSCCRG00000052383) ENSCCRG00000079862 glyctk (ENSCCRG00000072011) lrrn1 (ENSCCRG00000075719) ENSCCRG00000079901 ENSCCRG00000064951 arl6ip5a (ENSCCRG00000037540) #19 FRMD4B (ENSCCRG00000077808) #21 mitfa (ENSCCRG00000081533) #22 zgc:113054 (ENSCCRG00000078741) mdfic2 (ENSCCRG00000062468) #23 foxp1b (ENSCCRG00000068906) gpr27 (ENSCCRG00000072623) #27 prok2 (ENSCCRG00000050418) rybpb (ENSCCRG00000082479) #29 shq1 (ENSCCRG00000069665) #30 gxylt2 (ENSCCRG00000063702) #31 ppp4r2b (ENSCCRG00000059825) #32 pdzrn3b (ENSCCRG00000007526) #33 ENSCCRG00000057316 ENSCCRG00000025712 ##37 ENSCCRG00000052646 ENSCCRG00000036239 ENSCCRG00000064191 Golden-line barbel MODERN SPECIES 265 ENSSGRG00000028872 trnt1 (ENSSGRG00000028871) arl6ip5a (ENSSGRG00000028870) #19 FRMD4B (ENSSGRG00000028868) #21 mitfa (ENSSGRG00000028862) #22 zgc:113054 (ENSSGRG00000028860) MDFIC2 (ENSSGRG00000028859) #23 foxp1b (ENSSGRG00000028821) gpr27 (ENSSGRG00000028820) #27 prok2 (ENSSGRG00000028819) rybpb (ENSSGRG00000028818) #29 shq1 (ENSSGRG00000028817) #30 ENSSGRG00000028816 ppp4r2b (ENSSGRG00000028723) #32 pdzrn3b (ENSSGRG00000028720) #33 ENSSGRG00000028514 ##37 ENSSGRG00000028503 ENSSGRG00000028206 cntn4 (ENSSGRG00000028145) rbm19 (ENSSGRG00000027262) Cyprininae ANCESTRAL SPECIES 140 ENSGT00940000156468.e.e ENSGT00940000166798.b ENSGT00940000156703.e.b.f ENSGT00940000160395.b ENSGT00940000157717.c ENSGT00940000154861.n.b.a.a ENSGT00940000174943.a ENSGT01030000235084.a ENSGT00390000004490.e ENSGT00390000014365.c ENSGT00940000157154.d.d ENSGT01050000244882.b.c.a.a.b ENSGT00390000009678.b ENSGT00390000008631.a.o.a.i #19 ENSGT01020000230354.A.a.a.b #21 ENSGT00940000156326.a.b.b #22 ENSGT00390000011238 ENSGT00940000165309.d ENSGT00730000111641.b.a #23 ENSGT00940000165920.b.b ENSGT00890000139436.A.a.d #27 ENSGT00940000167138.d ENSGT00390000013995.b.a.o.b #29 ENSGT00390000007605.d #30 ENSGT00940000158065.b #31 ENSGT00940000162859.o.a #32 ENSGT00950000183062.a.a.a.k.a #33 ENSGT00940000155198.A.c ##37 ENSGT00940000165371.a.a ENSGT00940000167414.a ENSGT00940000164786.a.b Goldfish MODERN SPECIES 46 CAMKV (ENSCARG00000029318) ENSCARG00000029342 sema3fa (ENSCARG00000029420) gnat1 (ENSCARG00000030118) edem1 (ENSCARG00000030194) arl8ba (ENSCARG00000030355) tnfrsf18 (ENSCARG00000030388) ENSCARG00000030408 tcta (ENSCARG00000030413) glyctk (ENSCARG00000030429) lrrn1 (ENSCARG00000030435) ENSCARG00000030439 trnt1 (ENSCARG00000030454) arl6ip5a (ENSCARG00000030500) #19 FRMD4B (ENSCARG00000030526) #21 mitfa (ENSCARG00000030609) #22 zgc:113054 (ENSCARG00000030827) foxp1b (ENSCARG00000030943) gpr27 (ENSCARG00000033279) #27 prok2 (ENSCARG00000033291) rybpb (ENSCARG00000033322) #29 gxylt2 (ENSCARG00000033387) #31 pdzrn3b (ENSCARG00000033469) #33 ENSCARG00000033727 ##37 ENSCARG00000038949 ENSCARG00000039954 cntn4 (ENSCARG00000047197) epha2a (ENSCARG00000054314) H6PD (ENSCARG00000054970) rbp7b (ENSCARG00000055270) cenps (ENSCARG00000055300) Cyprininae_a ANCESTRAL SPECIES 20 ENSGT00940000156468.e.e ENSGT00940000166798.b ENSGT00940000156703.e.b.f ENSGT00940000160395.b ENSGT00940000157717.c ENSGT00940000154861.n.b.a.a ENSGT00940000174943.a ENSGT01030000235084.a ENSGT00390000004490.e ENSGT00390000014365.c ENSGT00940000157154.d.d ENSGT01050000244882.b.c.a.a.b ENSGT00390000009678.b ENSGT00390000008631.a.o.a.i #19 ENSGT01020000230354.A.a.a.b #21 ENSGT00940000156326.a.b.b #22 ENSGT00390000011238 ENSGT00940000165309.d ENSGT00730000111641.b.a #23 ENSGT00940000165920.b.a ENSGT00890000139436.A.a.d #27 ENSGT00940000167138.d ENSGT00390000013995.b.a.o.b #29 ENSGT00390000007605.d #30 ENSGT00940000158065.b #31 ENSGT00940000162859.o.a #32 ENSGT00950000183062.a.a.a.k.a #33 ENSGT00940000155198.A.c ##37 ENSGT00940000165371.a.a ENSGT00940000167414.a ENSGT00940000164786.a.b Common carp reference MODERN SPECIES 10 ENSCCRG00000022670 ENSCCRG00000052472 sema3fa (ENSCCRG00000052418) gnat1 (ENSCCRG00000055580) edem1 (ENSCCRG00000052393) arl8ba (ENSCCRG00000076186) tnfrsf18 (ENSCCRG00000068200) ENSCCRG00000069540 glyctk (ENSCCRG00000073402) tcta (ENSCCRG00000075404) lrrn1 (ENSCCRG00000066281) ENSCCRG00000022783 trnt1 (ENSCCRG00000078876) arl6ip5a (ENSCCRG00000076953) #19 FRMD4B (ENSCCRG00000080805) #21 mitfa (ENSCCRG00000067135) #22 ENSCCRG00000059648 zgc:113054 (ENSCCRG00000062971) MDFIC2 (ENSCCRG00000053946) #23 foxp1b (ENSCCRG00000020103) prok2 (ENSCCRG00000065684) rybpb (ENSCCRG00000071274) #29 shq1 (ENSCCRG00000060346) #30 gxylt2 (ENSCCRG00000066461) #31 ppp4r2b (ENSCCRG00000002302) #32 pdzrn3b (ENSCCRG00000002306) #33 ENSCCRG00000047782 ##37 ENSCCRG00000018444 ENSCCRG00000018336 cntn4 (ENSCCRG00000066369) rbm19 (ENSCCRG00000008461) Golden-line barbel MODERN SPECIES 59 CAMKV (ENSSGRG00000037719) ENSSGRG00000037813 sema3fa (ENSSGRG00000037815) gnat1 (ENSSGRG00000037816) edem1 (ENSSGRG00000037840) tnfrsf18 (ENSSGRG00000038249) ENSSGRG00000038250 tcta (ENSSGRG00000038251) glyctk (ENSSGRG00000038252) lrrn1 (ENSSGRG00000038253) ENSSGRG00000038257 ENSSGRG00000038291 arl6ip5a (ENSSGRG00000038295) #19 arl6ip5a (ENSSGRG00000038297) #19 FRMD4B (ENSSGRG00000038299) #21 mitfa (ENSSGRG00000038313) #22 zgc:113054 (ENSSGRG00000038319) MDFIC2 (ENSSGRG00000038321) #23 foxp1b (ENSSGRG00000038329) gpr27 (ENSSGRG00000038466) #27 prok2 (ENSSGRG00000038468) rybpb (ENSSGRG00000038470) #29 shq1 (ENSSGRG00000038472) #30 gxylt2 (ENSSGRG00000038480) #31 ppp4r2b (ENSSGRG00000038482) #32 pdzrn3b (ENSSGRG00000038484) #33 Zebrafish MODERN SPECIES 21 ENSDARG00000097941 sema3fa (ENSDARG00000011163) gnat1 (ENSDARG00000044199) edem1 (ENSDARG00000025094) arl8ba (ENSDARG00000006915) tnfrsf18 (ENSDARG00000076800) ENSDARG00000087225 tcta (ENSDARG00000044194) glyctk (ENSDARG00000060120) lrrn1 (ENSDARG00000060115) ENSDARG00000076797 FRMD4B (ENSDARG00000074599) #21 trnt1 (ENSDARG00000075297) arl6ip5a (ENSDARG00000077044) #19 ENSDARG00000112918 mitfa (ENSDARG00000003732) #22 ENSDARG00000087873 zgc:113054 (ENSDARG00000053483) mdfic2 (ENSDARG00000091832) #23 foxp1b (ENSDARG00000014181) gpr27 (ENSDARG00000006607) #27 prok2 (ENSDARG00000091616) rybpb (ENSDARG00000053459) #29 shq1 (ENSDARG00000058522) #30 gxylt2 (ENSDARG00000044191) #31 ppp4r2b (ENSDARG00000053447) #32 pdzrn3b (ENSDARG00000073869) #33 ENSDARG00000053454 ##37 ENSDARG00000103109 ENSDARG00000104277 ##37 ENSDARG00000112767 Euteleosteomorpha ANCESTRAL SPECIES 5 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Protacanthopterygii ANCESTRAL SPECIES 24 ENSGT01030000234648.a.b.a.b.a.b ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000004409.b ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 103 ENSGT01030000234648.a.b.a.b.a.b.e ENSGT00980000202247 ENSGT00390000006665.a.a ENSGT00940000157842.b.e ENSGT00940000156468.f.d ENSGT00940000156703.e.a.a ENSGT00940000154861.n.a ENSGT00940000158384.d.d ENSGT00940000155071.C.e ENSGT00940000162663.c ENSGT00940000157154.d.f ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678 ENSGT00390000008631.a.o.a.b #19 ENSGT01020000230354.A.a.a.d #21 ENSGT00940000156326.a.b.c #22 ENSGT00940000165309.e.a ENSGT00730000111641.b #23 ENSGT00940000165920.b.c ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a.b #27 ENSGT00940000167138.a ENSGT00390000013995.b.a #29 ENSGT00940000177762 ENSGT00940000158065.f #31 ENSGT00940000162859.o.f #32 ENSGT00950000183062.a.a.a.b #33 ENSGT00940000155198.A.f.a.a ##37 Salmoninae_a ANCESTRAL SPECIES 29 ENSGT01030000234648.a.b.a.b.a.b.e ENSGT00980000202247 ENSGT00390000006665.a.a ENSGT00940000157842.b.e ENSGT00940000156468.f.d ENSGT00940000156703.e.a.a ENSGT00940000154861.n.a ENSGT00940000158384.d.d ENSGT00940000155071.C.e ENSGT00940000162663.c ENSGT00940000157154.d.f ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678 ENSGT00390000008631.a.o.a.b #19 ENSGT01020000230354.A.a.a.d #21 ENSGT00940000156326.a.b.c #22 ENSGT00940000165309.e.a ENSGT00730000111641.b #23 ENSGT00940000165920.b.c ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a.b #27 ENSGT00940000167138.a ENSGT00390000013995.b.a.ab #29 ENSGT00940000177762 ENSGT00940000158065.f #31 ENSGT00940000162859.o.f #32 ENSGT00950000183062.a.a.a.b #33 ENSGT00940000155198.A.f.a.a ##37 ENSGT00940000155198.A.f.b ##37 ENSGT00940000155198.A.f.a.b ##37 ENSGT00940000165371.a.f Oncorhynchus ANCESTRAL SPECIES 1 ENSGT01030000234648.a.b.a.b.a.b.e ENSGT00980000202247 ENSGT00390000006665.a.a ENSGT00940000157842.b.e ENSGT00940000156468.f.d ENSGT00940000156703.e.a.a ENSGT00940000154861.n.a ENSGT00940000158384.d.d ENSGT00940000155071.C.e ENSGT00940000162663.c ENSGT00940000157154.d.f ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678.h ENSGT00390000008631.a.o.a.b #19 ENSGT01020000230354.A.a.a.d #21 ENSGT00940000156326.a.b.c #22 ENSGT00940000165309.e.a ENSGT00730000111641.b #23 ENSGT00940000165920.b.c ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a.b #27 ENSGT00940000167138.a ENSGT00390000013995.b.a.ab #29 ENSGT00940000177762 ENSGT00940000158065.f #31 ENSGT00940000162859.o.f #32 ENSGT00950000183062.a.a.a.b #33 ENSGT00940000155198.A.f.a.a ##37 ENSGT00940000155198.A.f.a.b ##37 ENSGT00940000165371.a.f ENSGT00940000155198.B.h ##37 Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT01030000234648.a.b.a.b.a.b.e ENSGT00980000202247 ENSGT00390000006665.a.a ENSGT00940000157842.b.e ENSGT00940000156468.f.d ENSGT00940000156703.e.a.a ENSGT00940000154861.n.a ENSGT00940000158384.d.d ENSGT00940000155071.C.e ENSGT00940000162663.c ENSGT00940000157154.d.f ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678.h ENSGT00390000008631.a.o.a.b #19 ENSGT01020000230354.A.a.a.d #21 ENSGT00940000156326.a.b.c #22 ENSGT00940000165309.e.a ENSGT00730000111641.b #23 ENSGT00940000165920.b.c ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a.b #27 ENSGT00390000013995.b.a.ab #29 ENSGT00940000177762 ENSGT00940000158065.f #31 ENSGT00940000162859.o.f #32 ENSGT00950000183062.a.a.a.b #33 ENSGT00940000155198.A.f.a.a ##37 ENSGT00940000155198.A.f.a.b ##37 ENSGT00940000165371.a.f ENSGT00940000155198.B.h ##37 ENSGT00940000164786.a.g.b Chinook salmon MODERN SPECIES 11 grm6b (ENSOTSG00005045198) ENSOTSG00005045212 mon1a (ENSOTSG00005045213) MST1R (ENSOTSG00005045214) camkvb (ENSOTSG00005000406) SEMA3F (ENSOTSG00005000749) arl8bb (ENSOTSG00005001141) bhlhe40 (ENSOTSG00005001151) ITPR1 (ENSOTSG00005001228) setmar (ENSOTSG00005001878) lrrn1 (ENSOTSG00005001879) ENSOTSG00005001880 trnt1 (ENSOTSG00005001883) arl6ip5a (ENSOTSG00005001888) #19 FRMD4B (ENSOTSG00005001893) #21 mitfa (ENSOTSG00005001922) #22 zgc:113054 (ENSOTSG00005002048) foxp1b (ENSOTSG00005002056) EIF4E3 (ENSOTSG00005004227) #26 gpr27 (ENSOTSG00005004228) #27 RYBP (ENSOTSG00005004229) #29 gxylt2 (ENSOTSG00005004230) #31 ppp4r2b (ENSOTSG00005004231) #32 pdzrn3b (ENSOTSG00005004234) #33 ENSOTSG00005004235 ##37 ENSOTSG00005004237 ##37 ENSOTSG00005004272 CNTN4 (ENSOTSG00005010550) ##37 ENSOTSG00005016602 cntn4 (ENSOTSG00005016608) ENSOTSG00005022408 Coho salmon MODERN SPECIES mon1a (ENSOKIG00005013313) MST1R (ENSOKIG00005013256) ENSOKIG00005013248 ENSOKIG00005013243 camkvb (ENSOKIG00005013204) SEMA3F (ENSOKIG00005013005) arl8bb (ENSOKIG00005012969) bhlhe40 (ENSOKIG00005012956) ITPR1 (ENSOKIG00005012584) setmar (ENSOKIG00005012520) lrrn1 (ENSOKIG00005012515) ENSOKIG00005012512 trnt1 (ENSOKIG00005012500) arl6ip5a (ENSOKIG00005012491) #19 FRMD4B (ENSOKIG00005012358) #21 mitfa (ENSOKIG00005012208) #22 zgc:113054 (ENSOKIG00005012160) mdfic2 (ENSOKIG00005012150) #23 foxp1b (ENSOKIG00005011174) EIF4E3 (ENSOKIG00005011081) #26 gpr27 (ENSOKIG00005011072) #27 ENSOKIG00005011059 RYBP (ENSOKIG00005011042) #29 ENSOKIG00005011034 gxylt2 (ENSOKIG00005011018) #31 ppp4r2b (ENSOKIG00005010978) #32 pdzrn3b (ENSOKIG00005010911) #33 ENSOKIG00005010875 ##37 ENSOKIG00005006688 ENSOKIG00005003652 ##37 cntn4 (ENSOKIG00005001800) Rainbow trout MODERN SPECIES 8 mon1a (ENSOMYG00000022263) ENSOMYG00000022319 camkvb (ENSOMYG00000022384) ENSOMYG00000022540 arl8bb (ENSOMYG00000022701) bhlhe40 (ENSOMYG00000022729) ITPR1 (ENSOMYG00000023613) ENSOMYG00000024717 setmar (ENSOMYG00000024725) lrrn1 (ENSOMYG00000024735) ENSOMYG00000024756 trnt1 (ENSOMYG00000024790) arl6ip5a (ENSOMYG00000024815) #19 FRMD4B (ENSOMYG00000025031) #21 ENSOMYG00000049451 mitfa (ENSOMYG00000025566) #22 zgc:113054 (ENSOMYG00000025999) mdfic2 (ENSOMYG00000026023) #23 foxp1b (ENSOMYG00000026154) ENSOMYG00000068868 ENSOMYG00000026823 EIF4E3 (ENSOMYG00000026861) #26 gpr27 (ENSOMYG00000026893) #27 prok2 (ENSOMYG00000026926) RYBP (ENSOMYG00000058096) #29 ENSOMYG00000027011 gxylt2 (ENSOMYG00000027027) #31 ppp4r2b (ENSOMYG00000027058) #32 pdzrn3b (ENSOMYG00000027116) #33 ENSOMYG00000066808 ENSOMYG00000027186 ##37 Salmo ANCESTRAL SPECIES 33 ENSGT00940000155317.a.a.q.b ENSGT01030000234648.a.b.a.b.a.b.e ENSGT00390000006665.a.a ENSGT00940000157842.b.e ENSGT00940000156468.f.d ENSGT00940000156703.e.a.a ENSGT00940000154861.n.a ENSGT00940000158384.d.d ENSGT00940000155071.C.e ENSGT00940000162663.c ENSGT00940000157154.d.f ENSGT01050000244882.b.c.a.a.c ENSGT00390000009678.e ENSGT00390000008631.a.o.a.b #19 ENSGT01020000230354.A.a.a.d #21 ENSGT00940000156326.a.b.c #22 ENSGT00940000165309.e.a ENSGT00730000111641.b #23 ENSGT00940000165920.b.c ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a.b #27 ENSGT00940000167138.a ENSGT00390000013995.b.a.ab #29 ENSGT00940000177762 ENSGT00940000158065.f #31 ENSGT00940000162859.o.f #32 ENSGT00950000183062.a.a.a.b #33 ENSGT00940000155198.A.f.b ##37 ENSGT00940000165371.a.f ENSGT00940000155198.B.h ##37 ENSGT00940000164786.a.g.b Atlantic salmon MODERN SPECIES 3 grm6b (ENSSSAG00000093082) mon1a (ENSSSAG00000043049) ENSSSAG00000043080 camkvb (ENSSSAG00000043153) ENSSSAG00000043762 arl8bb (ENSSSAG00000116454) BHLH2 (ENSSSAG00000052801) ITPR1 (ENSSSAG00000054019) ENSSSAG00000112671 setmar (ENSSSAG00000077574) lrrn1 (ENSSSAG00000098200) ENSSSAG00000077580 TRNT1 (ENSSSAG00000077584) arl6ip5a (ENSSSAG00000077595) #19 FRMD4B (ENSSSAG00000077601) #21 mitfa (ENSSSAG00000077659) #22 zgc:113054 (ENSSSAG00000077695) mdfic2 (ENSSSAG00000077706) #23 foxp1b (ENSSSAG00000077724) ENSSSAG00000111237 EIF4E3 (ENSSSAG00000118265) #26 gpr27 (ENSSSAG00000090342) #27 prok2 (ENSSSAG00000077970) RYBP (ENSSSAG00000112642) #29 ENSSSAG00000077990 gxylt2 (ENSSSAG00000082451) #31 ppp4r2b (ENSSSAG00000086913) #32 ENSSSAG00000098079 pdzrn3b (ENSSSAG00000103526) #33 ENSSSAG00000078049 ENSSSAG00000078091 ##37 River trout MODERN SPECIES 5 grm6b (ENSSTUG00000016561) traip (ENSSTUG00000016538) mon1a (ENSSTUG00000016521) ENSSTUG00000016484 camkvb (ENSSTUG00000016452) SEMA3F (ENSSTUG00000015849) arl8bb (ENSSTUG00000015812) bhlhe40 (ENSSTUG00000015789) ITPR1 (ENSSTUG00000015338) setmar (ENSSTUG00000015300) lrrn1 (ENSSTUG00000015297) ENSSTUG00000015291 trnt1 (ENSSTUG00000015279) arl6ip5a (ENSSTUG00000015266) #19 FRMD4B (ENSSTUG00000015084) #21 mitfa (ENSSTUG00000014914) #22 zgc:113054 (ENSSTUG00000014888) mdfic2 (ENSSTUG00000014882) #23 foxp1b (ENSSTUG00000014503) EIF4E3 (ENSSTUG00000014483) #26 gpr27 (ENSSTUG00000014479) #27 prok2 (ENSSTUG00000014470) RYBP (ENSSTUG00000014455) #29 ENSSTUG00000014447 gxylt2 (ENSSTUG00000014423) #31 ppp4r2b (ENSSTUG00000014392) #32 pdzrn3b (ENSSTUG00000014367) #33 ENSSTUG00000014263 ##37 ENSSTUG00000010027 ENSSTUG00000007621 ##37 cntn4 (ENSSTUG00000003421) Huchen MODERN SPECIES 664 ITPR1 (ENSHHUG00000016364) ENSHHUG00000017182 setmar (ENSHHUG00000017189) lrrn1 (ENSHHUG00000017192) ENSHHUG00000017197 trnt1 (ENSHHUG00000017207) arl6ip5a (ENSHHUG00000017210) #19 FRMD4B (ENSHHUG00000017226) #21 mitfa (ENSHHUG00000017254) #22 zgc:113054 (ENSHHUG00000017316) mdfic2 (ENSHHUG00000017355) #23 Salmoninae ANCESTRAL SPECIES 8 ENSGT00940000155317.a.a.q.a ENSGT01030000234648.a.b.a.b.a.b.f ENSGT00390000007696 ENSGT00390000006665.a.b ENSGT00940000157842.b.f ENSGT00940000156468.f.c ENSGT00940000156703.e.a.b ENSGT00940000158384.d.c ENSGT00940000155071.C.f ENSGT00940000162663.d ENSGT00940000157154.d.e ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000008631.a.o.a.a #19 ENSGT01020000230354.A.a.a.c #21 ENSGT00940000156326.a.b.d #22 ENSGT00940000165309.e.b ENSGT00940000165920.b.d ENSGT00890000139436.A.a.a #27 ENSGT00940000167138.b ENSGT00390000007605 #30 ENSGT00940000158065.e #31 ENSGT00940000162859.o.e #32 ENSGT00950000183062.a.a.a.a #33 ENSGT00940000155198.A.e ##37 ENSGT00940000165371.a.e ENSGT00940000155198.B.g ##37 ENSGT00940000164786.a.g.a ENSGT00940000158442.k ENSGT01100000263545.a.b.c.a.q ENSGT00940000165667.a Salmoninae_a ANCESTRAL SPECIES 25 ENSGT00940000155317.a.a.q.a ENSGT01030000234648.a.b.a.b.a.b.f ENSGT00390000007696 ENSGT00390000006665.a.b ENSGT00940000157842.b.f ENSGT00940000156468.f.c ENSGT00940000156703.e.a.b ENSGT00940000158384.d.c ENSGT00940000155071.C.f ENSGT00940000162663.d ENSGT00940000157154.d.e ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000008631.a.o.a.a #19 ENSGT01020000230354.A.a.a.c #21 ENSGT00940000156326.a.b.d #22 ENSGT00940000165309.e.b ENSGT00940000165920.b.d ENSGT00890000139436.A.a.a #27 ENSGT00940000167138.b ENSGT00390000013995.b.a.`b #29 ENSGT00390000007605 #30 ENSGT00940000158065.e #31 ENSGT00940000162859.o.e #32 ENSGT00950000183062.a.a.a.a #33 ENSGT00940000155198.A.e ##37 ENSGT00940000165371.a.e ENSGT00940000155198.B.g ##37 ENSGT00940000164786.a.g.a ENSGT00940000158442.k ENSGT01100000263545.a.b.c.a.q Salmo ANCESTRAL SPECIES 6 ENSGT01030000234648.a.b.a.b.a.b.f ENSGT00390000007696 ENSGT00390000006665.a.b ENSGT00940000157842.b.f ENSGT00940000156468.f.c ENSGT00940000156703.e.a.b ENSGT00940000158384.d.c ENSGT00940000155071.C.f ENSGT00940000162663.d ENSGT00940000157154.d.e ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000009678.f ENSGT00390000008631.a.o.a.a #19 ENSGT01020000230354.A.a.a.c #21 ENSGT00940000156326.a.b.d #22 ENSGT00940000165309.e.b ENSGT00940000165920.b.d ENSGT00890000139436.A.a.a #27 ENSGT00940000167138.b ENSGT00390000013995.b.a.`b #29 ENSGT00390000007605 #30 ENSGT00940000158065.e #31 ENSGT00940000162859.o.e #32 ENSGT00950000183062.a.a.a.a #33 ENSGT00940000155198.A.e ##37 ENSGT00940000165371.a.e ENSGT00940000155198.B.g ##37 ENSGT00940000164786.a.g.a ENSGT00940000158442.k ENSGT00940000163346.a.i.b.b.b Atlantic salmon MODERN SPECIES 14 mon1a (ENSSSAG00000081282) ENSSSAG00000081275 ENSSSAG00000117917 ENSSSAG00000081274 camkvb (ENSSSAG00000095316) ENSSSAG00000081205 BHLH2 (ENSSSAG00000081153) ENSSSAG00000078769 setmar (ENSSSAG00000078434) lrrn1 (ENSSSAG00000085844) ENSSSAG00000078424 ENSSSAG00000087334 trnt1 (ENSSSAG00000078413) arl6ip5a (ENSSSAG00000098089) #19 FRMD4B (ENSSSAG00000078356) #21 mitfa (ENSSSAG00000078323) #22 zgc:113054 (ENSSSAG00000078317) ENSSSAG00000121941 foxp1b (ENSSSAG00000077820) gpr27 (ENSSSAG00000093272) #27 prok2 (ENSSSAG00000077791) RYBP (ENSSSAG00000105530) #29 ENSSSAG00000103273 #29 shq1 (ENSSSAG00000077767) #30 gxylt2 (ENSSSAG00000077755) #31 ppp4r2b (ENSSSAG00000115308) #32 pdzrn3b (ENSSSAG00000077728) #33 ENSSSAG00000074668 ##37 ENSSSAG00000069369 ENSSSAG00000068685 ##37 cntn4 (ENSSSAG00000057173) River trout MODERN SPECIES 7 traip (ENSSTUG00000035875) mon1a (ENSSTUG00000035963) ENSSTUG00000035987 ENSSTUG00000036057 camkvb (ENSSTUG00000036070) SEMA3F (ENSSTUG00000036160) bhlhe40 (ENSSTUG00000037370) ITPR1 (ENSSTUG00000034046) setmar (ENSSTUG00000034728) ENSSTUG00000034740 lrrn1 (ENSSTUG00000034747) ENSSTUG00000034758 ENSSTUG00000034824 arl6ip5a (ENSSTUG00000034827) #19 FRMD4B (ENSSTUG00000034835) #21 mitfa (ENSSTUG00000034903) #22 zgc:113054 (ENSSTUG00000034952) foxp1b (ENSSTUG00000034974) gpr27 (ENSSTUG00000035129) #27 prok2 (ENSSTUG00000035134) RYBP (ENSSTUG00000035141) #29 shq1 (ENSSTUG00000035153) #30 gxylt2 (ENSSTUG00000035198) #31 ppp4r2b (ENSSTUG00000035210) #32 pdzrn3b (ENSSTUG00000035228) #33 ENSSTUG00000035268 ##37 ENSSTUG00000035461 ENSSTUG00000036007 ##37 cntn4 (ENSSTUG00000038446) ENSSTUG00000043834 ENSSTUG00000044631 Oncorhynchus ANCESTRAL SPECIES 5 ENSGT00940000155317.a.a.q.a ENSGT01030000234648.a.b.a.b.a.b.f ENSGT00390000007696 ENSGT00390000006665.a.b ENSGT00940000157842.b.f ENSGT00940000156468.f.c ENSGT00940000156703.e.a.b ENSGT00940000158384.d.c ENSGT00940000155071.C.f ENSGT00940000162663.d ENSGT00940000157154.d.e ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000008631.a.o.a.a #19 ENSGT01020000230354.A.a.a.c #21 ENSGT00940000156326.a.b.d #22 ENSGT00940000165309.e.b ENSGT00940000165920.b.d ENSGT00890000139436.A.a.a #27 ENSGT00940000167138.b ENSGT00390000013995.b.a.`b #29 ENSGT00390000007605 #30 ENSGT00940000158065.e #31 ENSGT00940000162859.o.e #32 ENSGT00950000183062.a.a.a.a #33 ENSGT00940000155198.A.e ##37 ENSGT00940000165371.a.e ENSGT00940000155198.B.g ##37 ENSGT00940000164786.a.g.a ENSGT00940000158442.k ENSGT00940000163346.a.i.b.b.b.f.b Rainbow trout MODERN SPECIES 28 mon1a (ENSOMYG00000021436) MST1R (ENSOMYG00000021410) ENSOMYG00000021362 ENSOMYG00000073574 camkvb (ENSOMYG00000021343) ENSOMYG00000019619 bhlhe40 (ENSOMYG00000019293) ENSOMYG00000019279 ENSOMYG00000018924 ENSOMYG00000058313 setmar (ENSOMYG00000018797) lrrn1 (ENSOMYG00000018787) ENSOMYG00000018779 praf3 (ENSOMYG00000018762) #19 FRMD4B (ENSOMYG00000018705) #21 mitfa (ENSOMYG00000018633) #22 ENSOMYG00000018605 foxp1b (ENSOMYG00000018060) gpr27 (ENSOMYG00000018032) #27 prok2 (ENSOMYG00000018025) ENSOMYG00000063847 RYBP (ENSOMYG00000018018) #29 ENSOMYG00000077625 shq1 (ENSOMYG00000017934) #30 gxylt2 (ENSOMYG00000017886) #31 ppp4r2b (ENSOMYG00000017842) #32 pdzrn3b (ENSOMYG00000017773) #33 ENSOMYG00000017727 ##37 ENSOMYG00000011770 ENSOMYG00000007157 ##37 cntn4 (ENSOMYG00000002873) Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT01030000234648.a.b.a.b.a.b.f ENSGT00390000007696 ENSGT00390000006665.a.b ENSGT00940000157842.b.f ENSGT00940000175393 ENSGT00940000156468.f.c ENSGT00940000156703.e.a.b ENSGT00940000158384.d.c ENSGT00940000155071.C.f ENSGT00940000162663.d ENSGT00940000157154.d.e ENSGT01050000244882.b.c.a.a.d ENSGT01010000224106 ENSGT00390000008631.a.o.a.a #19 ENSGT01020000230354.A.a.a.c #21 ENSGT00940000156326.a.b.d #22 ENSGT00940000165309.e.b ENSGT00940000165920.b.d ENSGT00890000139436.A.a.a #27 ENSGT00940000167138.b ENSGT00390000013995.b.a.`b #29 ENSGT00390000007605 #30 ENSGT00940000158065.e #31 ENSGT00940000162859.o.e #32 ENSGT00950000183062.a.a.a.a #33 ENSGT00940000155198.A.e ##37 ENSGT00940000165371.a.e ENSGT00940000155198.B.g ##37 ENSGT00940000164786.a.g.a ENSGT00940000158442.k ENSGT00940000163346.a.i.b.b.b.f.a Chinook salmon MODERN SPECIES 31 traip (ENSOTSG00005030396) mon1a (ENSOTSG00005030356) MST1R (ENSOTSG00005030351) ENSOTSG00005030348 ENSOTSG00005030346 camkvb (ENSOTSG00005030318) SEMA3F (ENSOTSG00005029841) bhlhe40 (ENSOTSG00005029834) ITPR1 (ENSOTSG00005029499) setmar (ENSOTSG00005029489) lrrn1 (ENSOTSG00005029488) ENSOTSG00005029487 ENSOTSG00005029486 arl6ip5a (ENSOTSG00005029485) #19 FRMD4B (ENSOTSG00005029474) #21 mitfa (ENSOTSG00005029470) #22 zgc:113054 (ENSOTSG00005029466) foxp1b (ENSOTSG00005029453) gpr27 (ENSOTSG00005029449) #27 prok2 (ENSOTSG00005029448) RYBP (ENSOTSG00005029447) #29 ENSOTSG00005029445 #29 shq1 (ENSOTSG00005029435) #30 gxylt2 (ENSOTSG00005029433) #31 ppp4r2b (ENSOTSG00005029431) #32 pdzrn3b (ENSOTSG00005029430) #33 ENSOTSG00005029428 ##37 ENSOTSG00005029427 ##37 ENSOTSG00005027529 ENSOTSG00005027201 ##37 cntn4 (ENSOTSG00005012641) Coho salmon MODERN SPECIES 25 traip (ENSOKIG00005000674) mon1a (ENSOKIG00005000633) ENSOKIG00005000620 ENSOKIG00005000607 ENSOKIG00005000597 ENSOKIG00005000585 camkvb (ENSOKIG00005000557) SEMA3F (ENSOKIG00005000482) bhlhe40 (ENSOKIG00005000439) ITPR1 (ENSOKIG00005000297) lrrn1 (ENSOKIG00005000048) ENSOKIG00005000039 ENSOKIG00005000022 arl6ip5a (ENSOKIG00005000004) #19 FRMD4B (ENSOKIG00005049789) #21 mitfa (ENSOKIG00005049743) #22 foxp1b (ENSOKIG00005049705) ENSOKIG00005049689 gpr27 (ENSOKIG00005049684) #27 prok2 (ENSOKIG00005049681) RYBP (ENSOKIG00005049678) #29 shq1 (ENSOKIG00005049664) #30 gxylt2 (ENSOKIG00005049658) #31 ppp4r2b (ENSOKIG00005049651) #32 pdzrn3b (ENSOKIG00005049640) #33 ENSOKIG00005049593 ##37 ENSOKIG00005048581 ENSOKIG00005047528 ##37 ENSOKIG00005047391 cntn4 (ENSOKIG00005044284) EPB41L1 (ENSOKIG00005043871) Huchen MODERN SPECIES 341 camkvb (ENSHHUG00000043047) SEMA3F (ENSHHUG00000043022) bhlhe40 (ENSHHUG00000043019) ITPR1 (ENSHHUG00000042039) setmar (ENSHHUG00000042006) lrrn1 (ENSHHUG00000042003) ENSHHUG00000042000 ENSHHUG00000041993 arl6ip5a (ENSHHUG00000041989) #19 FRMD4B (ENSHHUG00000041948) #21 mitfa (ENSHHUG00000041864) #22 ENSHHUG00000041860 ENSHHUG00000041856 ENSHHUG00000041852 ENSHHUG00000041849 Northern pike MODERN SPECIES 16 mon1a (ENSELUG00000004180) ENSELUG00000004158 ENSELUG00000033830 ENSELUG00000004107 camkvb (ENSELUG00000004070) SEMA3F (ENSELUG00000004030) arl8bb (ENSELUG00000003984) bhlhe40 (ENSELUG00000001165) ITPR1 (ENSELUG00000003888) setmar (ENSELUG00000003826) lrrn1 (ENSELUG00000003813) ENSELUG00000028972 trnt1 (ENSELUG00000003802) praf3 (ENSELUG00000003790) #19 FRMD4B (ENSELUG00000003740) #21 mitfa (ENSELUG00000003651) #22 zgc:113054 (ENSELUG00000003610) mdfic2 (ENSELUG00000003599) #23 foxp1b (ENSELUG00000003572) EIF4E3 (ENSELUG00000003543) #26 prok2 (ENSELUG00000003525) rybpa (ENSELUG00000003503) #29 shq1 (ENSELUG00000003476) #30 gxylt2 (ENSELUG00000003451) #31 ppp4r2b (ENSELUG00000003437) #32 pdzrn3b (ENSELUG00000003425) #33 ENSELUG00000032197 ENSELUG00000003407 ENSELUG00000025303 ENSELUG00000003398 ##37 ENSELUG00000003353 Acanthomorphata ANCESTRAL SPECIES 42 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Euacanthomorphacea ANCESTRAL SPECIES 1 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Percomorphaceae ANCESTRAL SPECIES 1 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Tiger tail seahorse MODERN SPECIES 280 mon1a (ENSHCOG00000010263) ENSHCOG00000010321 camkvb (ENSHCOG00000010400) SEMA3F (ENSHCOG00000010442) arl8bb (ENSHCOG00000010468) ENSHCOG00000010474 bhlhe40 (ENSHCOG00000010486) ENSHCOG00000000326 ITPR1 (ENSHCOG00000010574) ENSHCOG00000010596 setmar (ENSHCOG00000010603) lrrn1 (ENSHCOG00000010606) trnt1 (ENSHCOG00000010618) arl6ip5a (ENSHCOG00000010626) #19 FRMD4B (ENSHCOG00000010682) #21 mitfa (ENSHCOG00000010705) #22 foxp1b (ENSHCOG00000010731) ENSHCOG00000010745 EIF4E3 (ENSHCOG00000010757) #26 prok2 (ENSHCOG00000010773) RYBP (ENSHCOG00000010777) #29 shq1 (ENSHCOG00000010799) #30 gxylt2 (ENSHCOG00000010804) #31 ppp4r2b (ENSHCOG00000010808) #32 pdzrn3b (ENSHCOG00000010837) #33 ENSHCOG00000011365 ##37 ENSHCOG00000012171 cntn4 (ENSHCOG00000012418) EPB41L1 (ENSHCOG00000012467) ENSHCOG00000012484 ENSHCOG00000012516 Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Eupercaria ANCESTRAL SPECIES ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000167414.f Tetraodontidae ANCESTRAL SPECIES 1 ENSGT00940000153675.a.a.a.b ENSGT00940000159654 ENSGT00390000006113 ENSGT00940000160929 ENSGT00940000158061.b ENSGT00950000182882.A.a.i.a ENSGT00940000159178 ENSGT00940000161154.a ENSGT00950000183042.b.b ENSGT00940000157562.q.a ENSGT00390000004207 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 Tetraodon MODERN SPECIES 2 etnk2 (ENSTNIG00000007375) sox13 (ENSTNIG00000007374) snrpe (ENSTNIG00000007373) CDC42 (ENSTNIG00000007372) wnt4 (ENSTNIG00000007371) bin2b (ENSTNIG00000007370) txnrd3 (ENSTNIG00000007369) CHST13 (ENSTNIG00000007368) ENSTNIG00000007367 phactr3b (ENSTNIG00000007366) acot8 (ENSTNIG00000007365) ENSTNIG00000007364 trnt1 (ENSTNIG00000007363) arl6ip5a (ENSTNIG00000007362) #19 FRMD4B (ENSTNIG00000007361) #21 mitfa (ENSTNIG00000007360) #22 foxp1b (ENSTNIG00000007359) EIF4E3 (ENSTNIG00000007358) #26 prok2 (ENSTNIG00000007356) RYBP (ENSTNIG00000007355) #29 shq1 (ENSTNIG00000007354) #30 gxylt2 (ENSTNIG00000007353) #31 ppp4r2b (ENSTNIG00000007352) #32 pdzrn3b (ENSTNIG00000007351) #33 ENSTNIG00000007350 ##37 ENSTNIG00000007349 ENSTNIG00000007348 cntn4 (ENSTNIG00000007347) EPB41L1 (ENSTNIG00000007346) ENSTNIG00000007345 cdk5rap1 (ENSTNIG00000007344) Fugu MODERN SPECIES 10 ENSTRUG00000019719 wnt4 (ENSTRUG00000000172) svbp (ENSTRUG00000031729) fbxo2 (ENSTRUG00000020744) ITGA5 (ENSTRUG00000000179) bin2b (ENSTRUG00000000397) txnrd3 (ENSTRUG00000000449) CHST13 (ENSTRUG00000026383) ENSTRUG00000000605 phactr3b (ENSTRUG00000000766) acot8 (ENSTRUG00000000939) ENSTRUG00000001010 trnt1 (ENSTRUG00000001088) arl6ip5a (ENSTRUG00000019898) #19 FRMD4B (ENSTRUG00000001241) #21 mitfa (ENSTRUG00000001600) #22 ENSTRUG00000031691 foxp1b (ENSTRUG00000001947) EIF4E3 (ENSTRUG00000022670) #26 gpr27 (ENSTRUG00000003935) #27 prok2 (ENSTRUG00000024827) RYBP (ENSTRUG00000009347) #29 shq1 (ENSTRUG00000009446) #30 ENSTRUG00000009592 ppp4r2b (ENSTRUG00000009646) #32 pdzrn3b (ENSTRUG00000009749) #33 ENSTRUG00000009896 ##37 ENSTRUG00000010466 ENSTRUG00000011022 cntn4 (ENSTRUG00000011158) ENSTRUG00000015256 Eupecaria_A ANCESTRAL SPECIES ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000167414.f Ballan wrasse MODERN SPECIES 61 traip (ENSLBEG00000018662) mon1a (ENSLBEG00000018702) MST1R (ENSLBEG00000018750) camkvb (ENSLBEG00000018889) SEMA3F (ENSLBEG00000018957) arl8bb (ENSLBEG00000019016) NAAA (ENSLBEG00000019157) bhlhe40 (ENSLBEG00000019219) ITPR1 (ENSLBEG00000019256) setmar (ENSLBEG00000019413) lrrn1 (ENSLBEG00000019424) ENSLBEG00000019439 trnt1 (ENSLBEG00000019457) arl6ip5a (ENSLBEG00000019488) #19 FRMD4B (ENSLBEG00000019520) #21 mitfa (ENSLBEG00000019594) #22 ENSLBEG00000019618 zgc:113054 (ENSLBEG00000019640) foxp1b (ENSLBEG00000019691) Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a Perciformes ANCESTRAL SPECIES ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a Cottioidei ANCESTRAL SPECIES ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000164786.a ENSGT00940000158442 Lumpfish MODERN SPECIES 20 prickle2b (ENSCLMG00005007739) slc2a9l1 (ENSCLMG00005007738) psmd6 (ENSCLMG00005007733) ATXN7 (ENSCLMG00005007731) thoc7 (ENSCLMG00005007730) MX1 (ENSCLMG00005007189) ENSCLMG00005003609 bhlhe40 (ENSCLMG00005003585) ENSCLMG00005000519 setmar (ENSCLMG00005000422) lrrn1 (ENSCLMG00005000418) ENSCLMG00005000366 trnt1 (ENSCLMG00005000360) arl6ip5a (ENSCLMG00005000354) #19 FRMD4B (ENSCLMG00005000334) #21 mitfa (ENSCLMG00005000306) #22 zgc:113054 (ENSCLMG00005000299) foxp1b (ENSCLMG00005000158) EIF4E3 (ENSCLMG00005000065) #26 gpr27 (ENSCLMG00005020522) #27 prok2 (ENSCLMG00005020521) rybpa (ENSCLMG00005020520) #29 shq1 (ENSCLMG00005020519) #30 gxylt2 (ENSCLMG00005020518) #31 ppp4r2b (ENSCLMG00005020517) #32 pdzrn3b (ENSCLMG00005020516) #33 ENSCLMG00005020484 ##37 ENSCLMG00005020463 ENSCLMG00005020462 ENSCLMG00005020437 ENSCLMG00005020433 Stickleback MODERN SPECIES 17 traip (ENSGACG00000012044) mon1a (ENSGACG00000012037) ENSGACG00000012007 camkvb (ENSGACG00000011998) SEMA3F (ENSGACG00000011989) arl8bb (ENSGACG00000011972) NAAA (ENSGACG00000011964) ENSGACG00000011962 bhlhe40 (ENSGACG00000011940) ITPR1 (ENSGACG00000011921) setmar (ENSGACG00000011919) lrrn1 (ENSGACG00000011915) trnt1 (ENSGACG00000011903) arl6ip5a (ENSGACG00000011898) #19 FRMD4B (ENSGACG00000011892) #21 mitfa (ENSGACG00000011875) #22 ENSGACG00000011871 zgc:113054 (ENSGACG00000011845) foxp1b (ENSGACG00000011839) EIF4E3 (ENSGACG00000011825) #26 gpr27 (ENSGACG00000011823) #27 prok2 (ENSGACG00000011815) RYBP (ENSGACG00000011809) #29 shq1 (ENSGACG00000011797) #30 gxylt2 (ENSGACG00000011788) #31 ppp4r2b (ENSGACG00000011779) #32 pdzrn3b (ENSGACG00000011770) #33 ENSGACG00000011748 ##37 ENSGACG00000011735 cntn4 (ENSGACG00000011729) EPB41L1 (ENSGACG00000011718) Perciformes_a ANCESTRAL SPECIES 27 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 Channel bull blenny MODERN SPECIES 19 mon1a (ENSCGOG00000000725) ENSCGOG00000000720 camkvb (ENSCGOG00000000660) SEMA3F (ENSCGOG00000000535) arl8bb (ENSCGOG00000023683) NAAA (ENSCGOG00000023679) bhlhe40 (ENSCGOG00000023677) ENSCGOG00000023674 ITPR1 (ENSCGOG00000021328) setmar (ENSCGOG00000021226) lrrn1 (ENSCGOG00000021224) ENSCGOG00000021223 trnt1 (ENSCGOG00000021203) arl6ip5a (ENSCGOG00000021199) #19 FRMD4B (ENSCGOG00000021135) #21 mitfa (ENSCGOG00000021055) #22 zgc:113054 (ENSCGOG00000021042) foxp1b (ENSCGOG00000020445) EIF4E3 (ENSCGOG00000020423) #26 gpr27 (ENSCGOG00000020421) #27 prok2 (ENSCGOG00000020420) ENSCGOG00000020419 ENSCGOG00000020418 NXPE3 (ENSCGOG00000020414) NXPE3 (ENSCGOG00000020413) ENSCGOG00000020411 NXPE3 (ENSCGOG00000020409) rybpa (ENSCGOG00000020403) #29 shq1 (ENSCGOG00000020389) #30 gxylt2 (ENSCGOG00000020385) #31 ppp4r2b (ENSCGOG00000020375) #32 Pike perch MODERN SPECIES 11 traip (ENSSLUG00000022387) mon1a (ENSSLUG00000022403) ENSSLUG00000022410 camkvb (ENSSLUG00000005084) SEMA3F (ENSSLUG00000005295) arl8bb (ENSSLUG00000007380) NAAA (ENSSLUG00000007391) bhlhe40 (ENSSLUG00000007397) ITPR1 (ENSSLUG00000007574) setmar (ENSSLUG00000010262) lrrn1 (ENSSLUG00000010263) ENSSLUG00000010265 trnt1 (ENSSLUG00000010274) arl6ip5a (ENSSLUG00000010291) #19 FRMD4B (ENSSLUG00000010314) #21 mitfa (ENSSLUG00000010357) #22 zgc:113054 (ENSSLUG00000010375) foxp1b (ENSSLUG00000010380) EIF4E3 (ENSSLUG00000010383) #26 gpr27 (ENSSLUG00000010385) #27 prok2 (ENSSLUG00000010387) rybpa (ENSSLUG00000010391) #29 shq1 (ENSSLUG00000010395) #30 gxylt2 (ENSSLUG00000010399) #31 ppp4r2b (ENSSLUG00000010404) #32 pdzrn3b (ENSSLUG00000010409) #33 ENSSLUG00000010487 ##37 ENSSLUG00000010897 ENSSLUG00000014659 cntn4 (ENSSLUG00000015218) EPB41L1 (ENSSLUG00000015282) Eupecaria_C ANCESTRAL SPECIES ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000167414.f Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000167414.f European seabass MODERN SPECIES 10 ENSDLAG00005025559 grm6b (ENSDLAG00005025480) traip (ENSDLAG00005025462) ENSDLAG00005025454 CAMKV (ENSDLAG00005025437) ENSDLAG00005025304 ARL8B (ENSDLAG00005034963) ENSDLAG00005025286 bhlhe40 (ENSDLAG00005025285) ITPR1 (ENSDLAG00005024685) setmar (ENSDLAG00005032118) LRRN1 (ENSDLAG00005032471) trnt1 (ENSDLAG00005026509) arl6ip5a (ENSDLAG00005024563) #19 FRMD4B (ENSDLAG00005024483) #21 mitfa (ENSDLAG00005024449) #22 ENSDLAG00005028768 zgc:113054 (ENSDLAG00005024440) ENSDLAG00005024437 foxp1b (ENSDLAG00005024201) gpr27 (ENSDLAG00005024164) #27 EIF4E3 (ENSDLAG00005027715) #26 prok2 (ENSDLAG00005024161) RYBP (ENSDLAG00005024156) #29 shq1 (ENSDLAG00005029441) #30 gxylt2 (ENSDLAG00005024140) #31 ppp4r2b (ENSDLAG00005024099) #32 PDZRN3 (ENSDLAG00005024059) #33 ENSDLAG00005023906 ##37 ENSDLAG00005022052 ENSDLAG00005019553 Large yellow croaker MODERN SPECIES bhlhe40 (ENSLCRG00005022605) NAAA (ENSLCRG00005022608) ENSLCRG00005022610 arl8bb (ENSLCRG00005022612) ENSLCRG00005022615 SEMA3F (ENSLCRG00005022633) camkvb (ENSLCRG00005022967) ENSLCRG00005022968 mon1a (ENSLCRG00005022969) traip (ENSLCRG00005022970) grm6b (ENSLCRG00005022971) comtb (ENSLCRG00005023001) SRPK3 (ENSLCRG00005000084) ccdc120b (ENSLCRG00005000159) mbd1b (ENSLCRG00005000194) mitfa (ENSLCRG00005000244) #22 zgc:113054 (ENSLCRG00005000288) foxp1b (ENSLCRG00005000348) EIF4E3 (ENSLCRG00005000492) #26 gpr27 (ENSLCRG00005000493) #27 prok2 (ENSLCRG00005000494) RYBP (ENSLCRG00005000497) #29 shq1 (ENSLCRG00005000499) #30 gxylt2 (ENSLCRG00005000503) #31 ppp4r2b (ENSLCRG00005000505) #32 pdzrn3b (ENSLCRG00005000512) #33 ENSLCRG00005000576 ##37 ENSLCRG00005005149 ENSLCRG00005005415 ENSLCRG00005005460 cntn4 (ENSLCRG00005010873) Gilthead seabream MODERN SPECIES 20 traip (ENSSAUG00010017395) mon1a (ENSSAUG00010017406) ENSSAUG00010017412 camkvb (ENSSAUG00010017420) SEMA3F (ENSSAUG00010017498) arl8bb (ENSSAUG00010018930) ENSSAUG00010018932 bhlhe40 (ENSSAUG00010018934) ITPR1 (ENSSAUG00010018947) setmar (ENSSAUG00010020167) lrrn1 (ENSSAUG00010020168) ENSSAUG00010020169 trnt1 (ENSSAUG00010020172) arl6ip5a (ENSSAUG00010020174) #19 FRMD4B (ENSSAUG00010020175) #21 mitfa (ENSSAUG00010020177) #22 zgc:113054 (ENSSAUG00010020378) ENSSAUG00010020379 foxp1b (ENSSAUG00010020403) EIF4E3 (ENSSAUG00010020986) #26 gpr27 (ENSSAUG00010020987) #27 prok2 (ENSSAUG00010020989) rybpa (ENSSAUG00010020990) #29 shq1 (ENSSAUG00010020992) #30 gxylt2 (ENSSAUG00010020993) #31 ppp4r2b (ENSSAUG00010020996) #32 pdzrn3b (ENSSAUG00010021000) #33 ENSSAUG00010021023 ##37 ENSSAUG00010022515 ENSSAUG00010022516 ENSSAUG00010022690 Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Carangaria ANCESTRAL SPECIES 3 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Pleuronectoidei ANCESTRAL SPECIES 4 ENSGT01030000234648.a.b.a.b.a.b ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000165309.l ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 Turbot MODERN SPECIES 18 traip (ENSSMAG00000014911) mon1a (ENSSMAG00000014977) ENSSMAG00000014995 camkvb (ENSSMAG00000015020) ENSSMAG00000015037 arl8bb (ENSSMAG00000036408) ENSSMAG00000022883 ENSSMAG00000015251 bhlhe40 (ENSSMAG00000026563) setmar (ENSSMAG00000015405) lrrn1 (ENSSMAG00000015413) ENSSMAG00000026170 trnt1 (ENSSMAG00000015432) arl6ip5a (ENSSMAG00000015475) #19 FRMD4B (ENSSMAG00000015504) #21 mitfa (ENSSMAG00000015617) #22 zgc:113054 (ENSSMAG00000015942) foxp1b (ENSSMAG00000015987) EIF4E3 (ENSSMAG00000016095) #26 gpr27 (ENSSMAG00000016102) #27 prok2 (ENSSMAG00000016123) ENSSMAG00000023389 #29 shq1 (ENSSMAG00000016151) #30 gxylt2 (ENSSMAG00000016180) #31 ppp4r2b (ENSSMAG00000016193) #32 pdzrn3b (ENSSMAG00000016202) #33 ENSSMAG00000016297 ##37 ENSSMAG00000016323 ENSSMAG00000016507 cntn4 (ENSSMAG00000016676) ENSSMAG00000016752 Tongue sole MODERN SPECIES 2 dnali1 (ENSCSEG00000009037) txnrd3 (ENSCSEG00000008988) CHST13 (ENSCSEG00000008981) ENSCSEG00000008922 phactr3b (ENSCSEG00000008904) acot8 (ENSCSEG00000008882) ift52 (ENSCSEG00000008846) mybl2b (ENSCSEG00000008826) rpn2 (ENSCSEG00000008798) ghrh (ENSCSEG00000008769) cdk5rap1 (ENSCSEG00000008739) ENSCSEG00000008691 ENSCSEG00000008669 ENSCSEG00000008660 FRMD4B (ENSCSEG00000008619) #21 mitfa (ENSCSEG00000008599) #22 ENSCSEG00000008593 ENSCSEG00000008589 DRD5 (ENSCSEG00000008580) OTOP1 (ENSCSEG00000008567) TMEM128 (ENSCSEG00000008554) lyar (ENSCSEG00000008548) zbtb49 (ENSCSEG00000008540) etnk2 (ENSCSEG00000008524) ENSCSEG00000008511 slc41a1 (ENSCSEG00000008494) ENSCSEG00000008476 CHST15 (ENSCSEG00000008472) sox13 (ENSCSEG00000008443) snrpe (ENSCSEG00000008431) cdc42 (ENSCSEG00000008405) Carangaria_A ANCESTRAL SPECIES 7 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 1283 mitfa (ENSLCAG00010007842) #22 Barramundi perch MODERN SPECIES 150 ITPR1 (ENSLCAG00010026357) setmar (ENSLCAG00010026350) lrrn1 (ENSLCAG00010026349) ENSLCAG00010026347 trnt1 (ENSLCAG00010026346) arl6ip5a (ENSLCAG00010026345) #19 FRMD4B (ENSLCAG00010026341) #21 mitfa (ENSLCAG00010026304) #22 zgc:113054 (ENSLCAG00010026285) mdfic2 (ENSLCAG00010026283) #23 foxp1b (ENSLCAG00010026063) EIF4E3 (ENSLCAG00010025989) #26 gpr27 (ENSLCAG00010025988) #27 prok2 (ENSLCAG00010025987) rybpa (ENSLCAG00010025986) #29 shq1 (ENSLCAG00010025985) #30 gxylt2 (ENSLCAG00010025984) #31 ppp4r2b (ENSLCAG00010025982) #32 pdzrn3b (ENSLCAG00010025981) #33 ENSLCAG00010025778 ##37 ENSLCAG00010025678 ENSLCAG00010025055 ENSLCAG00010024221 Seriola ANCESTRAL SPECIES 10 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Yellowtail amberjack MODERN SPECIES 2631 traip (ENSSLDG00000009865) mon1a (ENSSLDG00000009834) MST1R (ENSSLDG00000009798) camkvb (ENSSLDG00000009673) SEMA3F (ENSSLDG00000009613) arl8bb (ENSSLDG00000009588) NAAA (ENSSLDG00000009564) bhlhe40 (ENSSLDG00000009545) ITPR1 (ENSSLDG00000009407) setmar (ENSSLDG00000009370) lrrn1 (ENSSLDG00000009364) ENSSLDG00000009355 trnt1 (ENSSLDG00000009325) arl6ip5a (ENSSLDG00000009316) #19 FRMD4B (ENSSLDG00000009202) #21 mitfa (ENSSLDG00000009140) #22 Greater amberjack MODERN SPECIES 37 mon1a (ENSSDUG00000012873) MST1R (ENSSDUG00000012803) camkvb (ENSSDUG00000012707) SEMA3F (ENSSDUG00000012565) ENSSDUG00000012547 arl8bb (ENSSDUG00000012529) NAAA (ENSSDUG00000012503) bhlhe40 (ENSSDUG00000012494) ITPR1 (ENSSDUG00000012375) setmar (ENSSDUG00000012353) lrrn1 (ENSSDUG00000012348) ENSSDUG00000012333 trnt1 (ENSSDUG00000012320) arl6ip5a (ENSSDUG00000012308) #19 FRMD4B (ENSSDUG00000012222) #21 mitfa (ENSSDUG00000012198) #22 ENSSDUG00000012183 zgc:113054 (ENSSDUG00000012153) mdfic2 (ENSSDUG00000012140) #23 foxp1b (ENSSDUG00000012073) EIF4E3 (ENSSDUG00000012045) #26 gpr27 (ENSSDUG00000012040) #27 prok2 (ENSSDUG00000012033) ENSSDUG00000012021 ENSSDUG00000012010 rybpa (ENSSDUG00000012000) #29 shq1 (ENSSDUG00000011986) #30 gxylt2 (ENSSDUG00000011974) #31 ppp4r2b (ENSSDUG00000011939) #32 pdzrn3b (ENSSDUG00000011879) #33 ENSSDUG00000011863 Anabantaria ANCESTRAL SPECIES ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 Zig-zag eel MODERN SPECIES 19 ENSMAMG00000023360 camkvb (ENSMAMG00000023367) ENSMAMG00000023374 arl8bb (ENSMAMG00000027917) ENSMAMG00000023382 ENSMAMG00000023384 bhlhe40 (ENSMAMG00000023386) ENSMAMG00000024536 ITPR1 (ENSMAMG00000023390) setmar (ENSMAMG00000023395) lrrn1 (ENSMAMG00000023397) ENSMAMG00000023400 trnt1 (ENSMAMG00000023401) arl6ip5a (ENSMAMG00000023405) #19 FRMD4B (ENSMAMG00000023408) #21 mitfa (ENSMAMG00000023414) #22 zgc:113054 (ENSMAMG00000023417) foxp1b (ENSMAMG00000023423) EIF4E3 (ENSMAMG00000023426) #26 gpr27 (ENSMAMG00000023427) #27 prok2 (ENSMAMG00000023429) RYBP (ENSMAMG00000024392) #29 shq1 (ENSMAMG00000023432) #30 gxylt2 (ENSMAMG00000023433) #31 ppp4r2b (ENSMAMG00000023435) #32 pdzrn3b (ENSMAMG00000023436) #33 ENSMAMG00000023438 ##37 ENSMAMG00000023440 ENSMAMG00000023444 cntn4 (ENSMAMG00000023452) ENSMAMG00000023454 Anabantoidei ANCESTRAL SPECIES 1 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000167414.f ENSGT00940000164786.a ENSGT00940000158442 Climbing perch MODERN SPECIES 18 traip (ENSATEG00000009440) mon1a (ENSATEG00000009424) ENSATEG00000009407 camkvb (ENSATEG00000009278) ENSATEG00000009213 arl8bb (ENSATEG00000028465) ENSATEG00000009196 bhlhe40 (ENSATEG00000009176) ITPR1 (ENSATEG00000009014) setmar (ENSATEG00000008998) lrrn1 (ENSATEG00000008988) ENSATEG00000008955 trnt1 (ENSATEG00000008928) arl6ip5a (ENSATEG00000008916) #19 FRMD4B (ENSATEG00000008872) #21 mitfa (ENSATEG00000008837) #22 zgc:113054 (ENSATEG00000008772) zgc:113054 (ENSATEG00000008721) foxp1b (ENSATEG00000008561) EIF4E3 (ENSATEG00000008530) #26 gpr27 (ENSATEG00000008522) #27 prok2 (ENSATEG00000008492) RYBP (ENSATEG00000029830) #29 shq1 (ENSATEG00000008475) #30 gxylt2 (ENSATEG00000008453) #31 ppp4r2b (ENSATEG00000008426) #32 pdzrn3b (ENSATEG00000008337) #33 ENSATEG00000025437 ENSATEG00000008222 ##37 ENSATEG00000008177 ENSATEG00000008133 Siamese fighting fish MODERN SPECIES 16 traip (ENSBSLG00000010544) mon1a (ENSBSLG00000010555) ENSBSLG00000010560 camkvb (ENSBSLG00000010678) SEMA3F (ENSBSLG00000010913) arl8bb (ENSBSLG00000013136) NAAA (ENSBSLG00000013286) bhlhe40 (ENSBSLG00000013372) ITPR1 (ENSBSLG00000013775) setmar (ENSBSLG00000020708) lrrn1 (ENSBSLG00000020709) ENSBSLG00000020712 trnt1 (ENSBSLG00000020713) arl6ip5a (ENSBSLG00000020715) #19 FRMD4B (ENSBSLG00000020719) #21 mitfa (ENSBSLG00000020732) #22 zgc:113054 (ENSBSLG00000020737) foxp1b (ENSBSLG00000020745) EIF4E3 (ENSBSLG00000020777) #26 gpr27 (ENSBSLG00000020778) #27 prok2 (ENSBSLG00000020780) rybpa (ENSBSLG00000020783) #29 shq1 (ENSBSLG00000021007) #30 gxylt2 (ENSBSLG00000021059) #31 ppp4r2b (ENSBSLG00000021096) #32 pdzrn3b (ENSBSLG00000021173) #33 ENSBSLG00000021423 ##37 ENSBSLG00000023123 cntn4 (ENSBSLG00000025556) ENSBSLG00000026064 cdk5rap1 (ENSBSLG00000026216) Ovalentaria ANCESTRAL SPECIES 2 ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Atherinomorphae ANCESTRAL SPECIES 2 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000177280 ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Oryzias ANCESTRAL SPECIES 59 ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00730000111323 ENSGT01050000244824.F ENSGT00940000158813 ENSGT00390000009678 ENSGT00940000179841 ENSGT00940000156326.a.b #22 ENSGT00940000165309.g ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000176933 ENSGT00940000160455 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00390000015972 ENSGT00940000158853 Oryzias_b ANCESTRAL SPECIES 65 ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00730000111323 ENSGT01050000244824.F ENSGT00940000158813 ENSGT00390000009678 ENSGT00940000179841 ENSGT00940000156326.a.b #22 ENSGT00940000165309.g ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000176933 ENSGT00940000160455 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00390000015972 ENSGT00940000158853 Indian medaka MODERN SPECIES 8 tmem33 (ENSOMEG00000003014) phox2bb (ENSOMEG00000003025) LIMCH1 (ENSOMEG00000003079) nanos1 (ENSOMEG00000003107) lbx2 (ENSOMEG00000003113) pcgf1 (ENSOMEG00000003141) ENSOMEG00000003153 ENSOMEG00000003166 ENSOMEG00000003185 ENSOMEG00000003225 blcap (ENSOMEG00000003240) mcm2 (ENSOMEG00000003267) lmcd1 (ENSOMEG00000003298) ENSOMEG00000003313 trnt1 (ENSOMEG00000003331) mitfa (ENSOMEG00000003364) #22 zgc:113054 (ENSOMEG00000003392) ENSOMEG00000003410 foxp1b (ENSOMEG00000003447) pcbp4 (ENSOMEG00000003516) rbm15b (ENSOMEG00000000801) manf (ENSOMEG00000003547) oser1 (ENSOMEG00000003557) ENSOMEG00000003570 ENSOMEG00000003580 GDF5 (ENSOMEG00000003585) uqcc1 (ENSOMEG00000000077) fam83c (ENSOMEG00000003633) MMP24 (ENSOMEG00000003660) eif6 (ENSOMEG00000003690) map1lc3a (ENSOMEG00000003708) Javanese ricefish MODERN SPECIES 19 thumpd3 (ENSOJAG00000006420) PTGIS (ENSOJAG00000006960) KCNB1 (ENSOJAG00000007142) ENSOJAG00000007216 PBRM1 (ENSOJAG00000007474) ENSOJAG00000007958 irf6 (ENSOJAG00000007964) ENSOJAG00000011697 ENSOJAG00000011757 blcap (ENSOJAG00000011763) ENSOJAG00000011766 lmcd1 (ENSOJAG00000012611) ENSOJAG00000012786 trnt1 (ENSOJAG00000012818) ENSOJAG00000012889 mitfa (ENSOJAG00000012917) #22 zgc:113054 (ENSOJAG00000013194) ENSOJAG00000013209 foxp1b (ENSOJAG00000013255) pcbp4 (ENSOJAG00000013952) rbm15b (ENSOJAG00000013963) manf (ENSOJAG00000013993) oser1 (ENSOJAG00000014028) ENSOJAG00000014036 ENSOJAG00000014050 GDF5 (ENSOJAG00000014091) uqcc1 (ENSOJAG00000014281) ENSOJAG00000014303 fam83c (ENSOJAG00000014309) ENSOJAG00000014318 MMP24 (ENSOJAG00000014335) Oryzias_a ANCESTRAL SPECIES 94 ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00730000111323 ENSGT01050000244824.F ENSGT00940000158813 ENSGT00390000009678 ENSGT00940000179841 ENSGT00940000156326.a.b #22 ENSGT00940000165309.g ENSGT00940000165920.b ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000176933 ENSGT00940000160455 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00390000015972 ENSGT00940000158853 ENSGT00940000165085 Japanese Medaka HdrR MODERN SPECIES 19 grm2b (ENSORLG00000003328) rrp9 (ENSORLG00000003315) cav4a (ENSORLG00000027005) itr1 (ENSORLG00000003297) ENSORLG00000026691 ENSORLG00000003286 ENSORLG00000003227 blcap (ENSORLG00000026381) ENSORLG00000025961 mcm2 (ENSORLG00000003191) ENSORLG00000003170 trnt1 (ENSORLG00000003165) ENSORLG00000003143 ENSORLG00000022697 ENSORLG00000022242 mitfa (ENSORLG00000003123) #22 ENSORLG00000029419 ENSORLG00000023023 zgc:113054 (ENSORLG00000003095) foxp1b (ENSORLG00000003081) pcbp4 (ENSORLG00000003061) rbm15b (ENSORLG00000025754) manf (ENSORLG00000028270) oser1 (ENSORLG00000025333) ENSORLG00000029294 ENSORLG00000029730 sdc4 (ENSORLG00000002981) ENSORLG00000029409 GDF5 (ENSORLG00000029983) uqcc1 (ENSORLG00000002962) fam83c (ENSORLG00000002950) Chinese medaka MODERN SPECIES 1011 ENSOSIG00000004918 inka1b (ENSOSIG00000008703) gnai2b (ENSOSIG00000008705) SLC38A3 (ENSOSIG00000008726) rbm5 (ENSOSIG00000010090) ENSOSIG00000010095 ENSOSIG00000010097 grm2b (ENSOSIG00000010102) rrp9 (ENSOSIG00000010151) cav4a (ENSOSIG00000010152) OXTR (ENSOSIG00000010154) blcap (ENSOSIG00000010983) lmcd1 (ENSOSIG00000010984) trnt1 (ENSOSIG00000010986) ENSOSIG00000010987 mitfa (ENSOSIG00000010989) #22 zgc:113054 (ENSOSIG00000011155) foxp1b (ENSOSIG00000011162) pcbp4 (ENSOSIG00000011294) Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Aplocheiloidei ANCESTRAL SPECIES 94 ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A.g ##37 ENSGT00940000165371.a ENSGT00940000167414 ENSGT00940000164786.a ENSGT00940000158442 Mangrove rivulus MODERN SPECIES 281 lrrn1 (ENSKMAG00000011273) ENSKMAG00000011289 trnt1 (ENSKMAG00000011307) FRMD4B (ENSKMAG00000011354) #21 mitfa (ENSKMAG00000011451) #22 zgc:113054 (ENSKMAG00000011479) foxp1b (ENSKMAG00000011548) Turquoise killifish MODERN SPECIES 1619 ARL8B (ENSNFUG00015006963) NAAA (ENSNFUG00015006976) SETMAR (ENSNFUG00015006981) ENSNFUG00015007193 BHLHE40 (ENSNFUG00015007198) ENSNFUG00015007201 ENSNFUG00015007205 ENSNFUG00015007209 ENSNFUG00015007210 LRRN1 (ENSNFUG00015007213) ENSNFUG00015007215 TRNT1 (ENSNFUG00015007219) ARL6IP5A (ENSNFUG00015007225) #19 FRMD4B (ENSNFUG00015007246) #21 ENSNFUG00015007330 mitfa (ENSNFUG00015007344) #22 zgc:113054 (ENSNFUG00015007370) foxp1b (ENSNFUG00015007381) ENSNFUG00015007395 EIF4E3 (ENSNFUG00015007400) #26 ENSNFUG00015007405 prok2 (ENSNFUG00015007407) RYBP (ENSNFUG00015007410) #29 SHQ1 (ENSNFUG00015007416) #30 ENSNFUG00015007428 GXYLT2 (ENSNFUG00015007433) #31 ppp4r2b (ENSNFUG00015007437) #32 ENSNFUG00015007441 ENSNFUG00015007444 ENSNFUG00015007448 pdzrn3b (ENSNFUG00015007455) #33 Cyprinodontoidei ANCESTRAL SPECIES 4 ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A.l ENSGT00530000063548.A.k ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00940000175464 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000178117 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 NAME_4 ANCESTRAL SPECIES 63 ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A.l ENSGT00530000063548.A.k ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00940000175464 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 ENSGT00940000167414 Mummichog MODERN SPECIES 313 ENSFHEG00000019608 arl8bb (ENSFHEG00000019579) ENSFHEG00000019555 NAAA (ENSFHEG00000019547) bhlhe40 (ENSFHEG00000019542) ITPR1 (ENSFHEG00000019522) setmar (ENSFHEG00000019347) lrrn1 (ENSFHEG00000019336) ENSFHEG00000019332 ENSFHEG00000019322 trnt1 (ENSFHEG00000019294) ENSFHEG00000019257 arl6ip5a (ENSFHEG00000019240) #19 FRMD4B (ENSFHEG00000019218) #21 ENSFHEG00000019182 mitfa (ENSFHEG00000019131) #22 ENSFHEG00000017933 zgc:113054 (ENSFHEG00000017918) foxp1b (ENSFHEG00000017865) EIF4E3 (ENSFHEG00000017632) #26 gpr27 (ENSFHEG00000017617) #27 prok2 (ENSFHEG00000017583) rybpa (ENSFHEG00000017560) #29 shq1 (ENSFHEG00000017552) #30 gxylt2 (ENSFHEG00000017536) #31 ppp4r2b (ENSFHEG00000017528) #32 pdzrn3b (ENSFHEG00000017519) #33 ENSFHEG00000017494 ##37 ENSFHEG00000017415 ENSFHEG00000017387 ##37 ENSFHEG00000017343 ##37 Sheepshead minnow MODERN SPECIES 163 ENSCVAG00000019514 bhlhe40 (ENSCVAG00000019523) ENSCVAG00000019534 ITPR1 (ENSCVAG00000019702) setmar (ENSCVAG00000000509) lrrn1 (ENSCVAG00000000510) ENSCVAG00000019729 ENSCVAG00000019734 ENSCVAG00000019761 trnt1 (ENSCVAG00000019770) ENSCVAG00000019782 arl6ip5a (ENSCVAG00000019799) #19 FRMD4B (ENSCVAG00000019832) #21 mitfa (ENSCVAG00000019875) #22 ENSCVAG00000019895 zgc:113054 (ENSCVAG00000019960) foxp1b (ENSCVAG00000019977) EIF4E3 (ENSCVAG00000020000) #26 ENSCVAG00000020009 gpr27 (ENSCVAG00000020011) #27 prok2 (ENSCVAG00000020024) rybpa (ENSCVAG00000020045) #29 shq1 (ENSCVAG00000020049) #30 gxylt2 (ENSCVAG00000020052) #31 ppp4r2b (ENSCVAG00000020063) #32 pdzrn3b (ENSCVAG00000020100) #33 ENSCVAG00000020182 ##37 ENSCVAG00000020246 Poeciliinae ANCESTRAL SPECIES 4 ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A.l ENSGT00530000063548.A.k ENSGT00940000158384.d ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00940000175464 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 ENSGT00940000181969 ENSGT00940000157503.i.b ENSGT00940000155877 ENSGT01030000234549.a.a.a.b.s.a ENSGT01030000234549.a.a.a.b.s.b Poecilia ANCESTRAL SPECIES 20 ENSGT01020000230394.e.a.a.b.a.a.b.a.a ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A.l ENSGT00530000063548.A.k ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00940000175464 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00940000165164.b.j ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 ENSGT00940000157503.i.b ENSGT00940000155877 ENSGT01030000234549.a.a.a.b.s.a ENSGT01030000234549.a.a.a.b.s.b NAME_6 ANCESTRAL SPECIES 141 ENSGT00740000115534.b ENSGT01020000230394.e.a.a.b.a.a.b.a.a ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A.l ENSGT00530000063548.A.k ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT00970000193381.a.a.a.a.a.a.a.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000156468.f ENSGT00940000157842.b ENSGT00390000006665.a ENSGT00940000165164.b.j ENSGT00390000007696 ENSGT01030000234648.a.b.a.b.a.b ENSGT00940000155317.a.a ENSGT00940000157877.b.h ENSGT00940000154102.b.a.a ENSGT00950000183005.a.a ENSGT00940000166392 ENSGT00940000157503.i.b ENSGT00940000155877 ENSGT01030000234549.a.a.a.b.s.a Sailfin molly MODERN SPECIES 2010 mitfa (ENSPLAG00000019965) #22 CAMKV (ENSPLAG00000019929) Amazon molly MODERN SPECIES 430 ENSPFOG00000001682 SEMA3F (ENSPFOG00000002849) arl8bb (ENSPFOG00000003916) ENSPFOG00000004036 bhlhe40 (ENSPFOG00000004275) ITPR1 (ENSPFOG00000004491) setmar (ENSPFOG00000006180) lrrn1 (ENSPFOG00000020409) ENSPFOG00000006181 ENSPFOG00000006189 trnt1 (ENSPFOG00000006194) arl6ip5a (ENSPFOG00000006251) #19 arl6ip5a (ENSPFOG00000006253) #19 FRMD4B (ENSPFOG00000006321) #21 mitfa (ENSPFOG00000006677) #22 camkvb (ENSPFOG00000006783) ENSPFOG00000006925 mon1a (ENSPFOG00000007130) ENSPFOG00000007170 traip (ENSPFOG00000007180) grm6b (ENSPFOG00000007313) comtb (ENSPFOG00000007504) ccdc120b (ENSPFOG00000007506) mbd1b (ENSPFOG00000007511) cxxc1b (ENSPFOG00000007618) tfe3b (ENSPFOG00000007817) gnl3l (ENSPFOG00000007874) ENSPFOG00000008152 Guppy MODERN SPECIES 457 ENSPREG00000021150 SEMA3F (ENSPREG00000021291) arl8bb (ENSPREG00000021315) ENSPREG00000021335 ENSPREG00000021354 bhlhe40 (ENSPREG00000021365) ITPR1 (ENSPREG00000021387) ENSPREG00000021441 lrrn1 (ENSPREG00000021458) ENSPREG00000021460 ENSPREG00000021464 trnt1 (ENSPREG00000021470) ENSPREG00000021478 arl6ip5a (ENSPREG00000021482) #19 FRMD4B (ENSPREG00000021492) #21 mitfa (ENSPREG00000021528) #22 camkvb (ENSPREG00000021561) ENSPREG00000021586 ENSPREG00000021618 mon1a (ENSPREG00000021632) ENSPREG00000021636 traip (ENSPREG00000021665) grm6b (ENSPREG00000021714) comtb (ENSPREG00000021730) SRPK3 (ENSPREG00000021760) ccdc120b (ENSPREG00000021798) mbd1b (ENSPREG00000021805) cxxc1b (ENSPREG00000021824) tfe3b (ENSPREG00000021875) gnl3l (ENSPREG00000021994) ENSPREG00000022016 Platyfish MODERN SPECIES 12 SEMA3F (ENSXMAG00000008023) arl8bb (ENSXMAG00000008092) ENSXMAG00000024098 ENSXMAG00000008105 bhlhe40 (ENSXMAG00000025515) ENSXMAG00000021673 ITPR1 (ENSXMAG00000008118) setmar (ENSXMAG00000029083) lrrn1 (ENSXMAG00000020066) ENSXMAG00000028634 ENSXMAG00000027163 trnt1 (ENSXMAG00000002227) ENSXMAG00000002226 arl6ip5a (ENSXMAG00000002223) #19 ENSXMAG00000002210 #21 mitfa (ENSXMAG00000002200) #22 camkvb (ENSXMAG00000002182) ENSXMAG00000002163 mon1a (ENSXMAG00000002162) traip (ENSXMAG00000002153) grm6b (ENSXMAG00000002147) ENSXMAG00000002143 ENSXMAG00000002137 ENSXMAG00000002136 ENSXMAG00000002135 gnrh2 (ENSXMAG00000002133) ptpra (ENSXMAG00000002115) idh3b (ENSXMAG00000002101) WDR1 (ENSXMAG00000002092) SLC2A9 (ENSXMAG00000002081) ENSXMAG00000020065 Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000177280 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Cichlidae ANCESTRAL SPECIES 1 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Nile tilapia MODERN SPECIES 17 mon1a (ENSONIG00000020283) ENSONIG00000020282 camkvb (ENSONIG00000036268) SEMA3F (ENSONIG00000020280) ENSONIG00000028560 arl8bb (ENSONIG00000020279) NAAA (ENSONIG00000020278) bhlhe40 (ENSONIG00000020277) ITPR1 (ENSONIG00000020276) setmar (ENSONIG00000020275) lrrn1 (ENSONIG00000020810) ENSONIG00000020274 trnt1 (ENSONIG00000020273) arl6ip5a (ENSONIG00000029243) #19 FRMD4B (ENSONIG00000020271) #21 mitfa (ENSONIG00000020270) #22 ENSONIG00000041875 ddx4 (ENSONIG00000030953) zgc:113054 (ENSONIG00000020268) mdfic2 (ENSONIG00000035668) #23 foxp1b (ENSONIG00000020267) EIF4E3 (ENSONIG00000020266) #26 gpr27 (ENSONIG00000040990) #27 prok2 (ENSONIG00000030565) rybpa (ENSONIG00000020265) #29 ENSONIG00000030779 shq1 (ENSONIG00000020264) #30 gxylt2 (ENSONIG00000020263) #31 ppp4r2 (ENSONIG00000031128) #32 pdzrn3b (ENSONIG00000020261) #33 ENSONIG00000020260 ##37 Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Lyretail cichlid MODERN SPECIES 296 grm6b (ENSNBRG00000023489) traip (ENSNBRG00000023496) ENSNBRG00000023505 camkvb (ENSNBRG00000023513) SEMA3F (ENSNBRG00000023532) arl8bb (ENSNBRG00000023542) ENSNBRG00000023549 BHLHE40 (ENSNBRG00000023554) ITPR1 (ENSNBRG00000023567) setmar (ENSNBRG00000023590) lrrn1 (ENSNBRG00000023596) ENSNBRG00000023604 trnt1 (ENSNBRG00000023606) arl6ip5a (ENSNBRG00000023616) #19 FRMD4B (ENSNBRG00000023651) #21 mitfa (ENSNBRG00000023738) #22 ENSNBRG00000023889 zgc:113054 (ENSNBRG00000023930) foxp1b (ENSNBRG00000023949) EIF4E3 (ENSNBRG00000023984) #26 gpr27 (ENSNBRG00000023989) #27 prok2 (ENSNBRG00000023996) rybpa (ENSNBRG00000023999) #29 shq1 (ENSNBRG00000024004) #30 ENSNBRG00000024008 gxylt2 (ENSNBRG00000024016) #31 ENSNBRG00000000227 #32 pdzrn3b (ENSNBRG00000000238) #33 ENSNBRG00000000246 ENSNBRG00000000266 ##37 ENSNBRG00000000316 Haplochromini ANCESTRAL SPECIES 1 ENSGT00390000007696 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Burton s mouthbrooder MODERN SPECIES 819 bhlhe40 (ENSHBUG00000003130) ITPR1 (ENSHBUG00000002972) setmar (ENSHBUG00000002829) lrrn1 (ENSHBUG00000002813) ENSHBUG00000002807 trnt1 (ENSHBUG00000002797) arl6ip5a (ENSHBUG00000002781) #19 FRMD4B (ENSHBUG00000002761) #21 mitfa (ENSHBUG00000002744) #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000179368 ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Haplochromini_B ANCESTRAL SPECIES ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000179368 ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00730000111641.b #23 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 Eastern happy MODERN SPECIES 17 camkvb (ENSACLG00000021669) ENSACLG00000021691 SEMA3F (ENSACLG00000021730) ENSACLG00000021860 arl8bb (ENSACLG00000021872) ENSACLG00000021909 bhlhe40 (ENSACLG00000021923) ITPR1 (ENSACLG00000021949) setmar (ENSACLG00000022175) lrrn1 (ENSACLG00000022186) ENSACLG00000022197 ENSACLG00000022206 trnt1 (ENSACLG00000022227) arl6ip5a (ENSACLG00000022278) #19 FRMD4B (ENSACLG00000022299) #21 mitfa (ENSACLG00000022427) #22 ENSACLG00000022536 zgc:113054 (ENSACLG00000022547) mdfic2 (ENSACLG00000022587) #23 foxp1b (ENSACLG00000022616) EIF4E3 (ENSACLG00000022985) #26 gpr27 (ENSACLG00000023012) #27 prok2 (ENSACLG00000023039) rybpa (ENSACLG00000023062) #29 shq1 (ENSACLG00000023077) #30 gxylt2 (ENSACLG00000023097) #31 ppp4r2b (ENSACLG00000023118) #32 pdzrn3b (ENSACLG00000023265) #33 ENSACLG00000023317 ##37 ENSACLG00000023336 ENSACLG00000023351 Zebra mbuna MODERN SPECIES 1108 SEC61A1 (ENSMZEG00005009480) chchd4a (ENSMZEG00005009465) ENSMZEG00005009430 ENSMZEG00005009403 ENSMZEG00005009393 ENSMZEG00005009383 ENSMZEG00005009336 bhlhe40 (ENSMZEG00005009312) ITPR1 (ENSMZEG00005009223) setmar (ENSMZEG00005009204) lrrn1 (ENSMZEG00005009199) ENSMZEG00005009157 trnt1 (ENSMZEG00005009141) arl6ip5a (ENSMZEG00005009134) #19 FRMD4B (ENSMZEG00005009091) #21 mitfa (ENSMZEG00005008959) #22 zgc:113054 (ENSMZEG00005008911) mdfic2 (ENSMZEG00005008892) #23 foxp1b (ENSMZEG00005008804) EIF4E3 (ENSMZEG00005008767) #26 gpr27 (ENSMZEG00005008748) #27 prok2 (ENSMZEG00005008722) rybpa (ENSMZEG00005008698) #29 shq1 (ENSMZEG00005008649) #30 gxylt2 (ENSMZEG00005008602) #31 ppp4r2b (ENSMZEG00005008591) #32 pdzrn3b (ENSMZEG00005008554) #33 ENSMZEG00005008531 ##37 ENSMZEG00005008437 ENSMZEG00005008392 ##37 ENSMZEG00005008380 P. nyererei MODERN SPECIES 316 bhlhe40 (ENSPNYG00000002765) ITPR1 (ENSPNYG00000002900) setmar (ENSPNYG00000003058) lrrn1 (ENSPNYG00000003065) ENSPNYG00000003083 trnt1 (ENSPNYG00000003120) arl6ip5a (ENSPNYG00000003159) #19 FRMD4B (ENSPNYG00000003194) #21 mitfa (ENSPNYG00000003348) #22 zgc:113054 (ENSPNYG00000003372) mdfic2 (ENSPNYG00000003404) #23 foxp1b (ENSPNYG00000003448) EIF4E3 (ENSPNYG00000003711) #26 gpr27 (ENSPNYG00000003739) #27 prok2 (ENSPNYG00000003818) rybpa (ENSPNYG00000003852) #29 shq1 (ENSPNYG00000003878) #30 gxylt2 (ENSPNYG00000003893) #31 ppp4r2b (ENSPNYG00000003934) #32 pdzrn3b (ENSPNYG00000003966) #33 ENSPNYG00000004028 ##37 ENSPNYG00000004096 ENSPNYG00000004242 ##37 ENSPNYG00000004264 Midas cichlid MODERN SPECIES 319 lrrn1 (ENSACIG00000021735) ENSACIG00000021720 trnt1 (ENSACIG00000021706) arl6ip5a (ENSACIG00000021665) #19 FRMD4B (ENSACIG00000021534) #21 mitfa (ENSACIG00000021479) #22 ENSACIG00000021462 ENSACIG00000021447 zgc:113054 (ENSACIG00000021422) mdfic2 (ENSACIG00000021414) #23 foxp1b (ENSACIG00000021338) EIF4E3 (ENSACIG00000021312) #26 gpr27 (ENSACIG00000021306) #27 prok2 (ENSACIG00000021289) rybpa (ENSACIG00000021280) #29 shq1 (ENSACIG00000021249) #30 gxylt2 (ENSACIG00000021226) #31 ENSACIG00000021216 #32 pdzrn3b (ENSACIG00000021190) #33 ENSACIG00000021148 ##37 ENSACIG00000021051 Pomacentridae ANCESTRAL SPECIES 33 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00390000011238 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 ENSGT00940000167414 Pomacentridae_A ANCESTRAL SPECIES 2 ENSGT00390000006665.a ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 ENSGT00940000167414 ENSGT00940000164786.a Amphiprion ANCESTRAL SPECIES 38 ENSGT00940000157842.b ENSGT00940000156468.f ENSGT00940000156703.e.a ENSGT00940000154861.n.a ENSGT00940000163250.B.b.a.a ENSGT00530000063548.A ENSGT00940000158384.d ENSGT00940000181580 ENSGT00940000155071.C ENSGT00940000162663 ENSGT00940000157154.d ENSGT01050000244882.b.c.a.a ENSGT00390000009678 ENSGT00390000008631.a.o.a #19 ENSGT01020000230354.A.a.a #21 ENSGT00940000156326.a.b #22 ENSGT00940000165309 ENSGT00940000165920.b ENSGT00940000155865.c.b #26 ENSGT00890000139436.A.a #27 ENSGT00940000167138 ENSGT00390000013995.b.a #29 ENSGT00390000007605 #30 ENSGT00940000158065 #31 ENSGT00940000162859.o #32 ENSGT00950000183062.a.a.a #33 ENSGT00940000155198.A ##37 ENSGT00940000165371.a ENSGT00940000155198.B ##37 ENSGT00940000167414 ENSGT00940000164786.a Clown anemonefish MODERN SPECIES 643 ENSAOCG00000024607 trnt1 (ENSAOCG00000024612) arl6ip5a (ENSAOCG00000024615) #19 FRMD4B (ENSAOCG00000024631) #21 mitfa (ENSAOCG00000024679) #22 zgc:113054 (ENSAOCG00000024696) foxp1b (ENSAOCG00000024710) EIF4E3 (ENSAOCG00000024717) #26 gpr27 (ENSAOCG00000024721) #27 prok2 (ENSAOCG00000024726) Orange clownfish MODERN SPECIES 20 ENSAPEG00000022994 camkvb (ENSAPEG00000022969) SEMA3F (ENSAPEG00000022941) arl8bb (ENSAPEG00000022867) ENSAPEG00000022852 ENSAPEG00000022832 bhlhe40 (ENSAPEG00000022818) ENSAPEG00000022812 ITPR1 (ENSAPEG00000022750) setmar (ENSAPEG00000022737) lrrn1 (ENSAPEG00000022732) ENSAPEG00000022640 trnt1 (ENSAPEG00000022627) arl6ip5a (ENSAPEG00000022602) #19 FRMD4B (ENSAPEG00000022527) #21 mitfa (ENSAPEG00000022061) #22 zgc:113054 (ENSAPEG00000021963) foxp1b (ENSAPEG00000021804) EIF4E3 (ENSAPEG00000021766) #26 gpr27 (ENSAPEG00000021757) #27 prok2 (ENSAPEG00000021745) rybpa (ENSAPEG00000021704) #29 shq1 (ENSAPEG00000021686) #30 gxylt2 (ENSAPEG00000021661) #31 ppp4r2b (ENSAPEG00000021643) #32 pdzrn3b (ENSAPEG00000021602) #33 ENSAPEG00000021462 ##37 ENSAPEG00000021372 ENSAPEG00000021335 ##37 ENSAPEG00000021312 cntn4 (ENSAPEG00000021259) Spiny chromis MODERN SPECIES 5 traip (ENSAPOG00000013037) mon1a (ENSAPOG00000000350) ENSAPOG00000013161 camkvb (ENSAPOG00000013178) SEMA3F (ENSAPOG00000013275) arl8bb (ENSAPOG00000013328) NAAA (ENSAPOG00000013354) bhlhe40 (ENSAPOG00000013386) ITPR1 (ENSAPOG00000013619) setmar (ENSAPOG00000013638) lrrn1 (ENSAPOG00000013646) ENSAPOG00000013653 trnt1 (ENSAPOG00000013687) arl6ip5a (ENSAPOG00000013701) #19 FRMD4B (ENSAPOG00000013741) #21 mitfa (ENSAPOG00000013777) #22 zgc:113054 (ENSAPOG00000013829) foxp1b (ENSAPOG00000014209) EIF4E3 (ENSAPOG00000014276) #26 gpr27 (ENSAPOG00000014287) #27 prok2 (ENSAPOG00000014310) rybpa (ENSAPOG00000014342) #29 shq1 (ENSAPOG00000000397) #30 gxylt2 (ENSAPOG00000014376) #31 ppp4r2b (ENSAPOG00000014386) #32 pdzrn3b (ENSAPOG00000014464) #33 ENSAPOG00000014475 ##37 ENSAPOG00000014540 Bicolor damselfish MODERN SPECIES 386 arl8bb (ENSSPAG00000020792) NAAA (ENSSPAG00000020825) bhlhe40 (ENSSPAG00000020842) ITPR1 (ENSSPAG00000020866) setmar (ENSSPAG00000020978) lrrn1 (ENSSPAG00000020983) ENSSPAG00000020992 trnt1 (ENSSPAG00000021005) arl6ip5a (ENSSPAG00000021027) #19 FRMD4B (ENSSPAG00000021053) #21 mitfa (ENSSPAG00000021146) #22 ENSSPAG00000021184 zgc:113054 (ENSSPAG00000021191) foxp1b (ENSSPAG00000021219) EIF4E3 (ENSSPAG00000021234) #26 gpr27 (ENSSPAG00000021244) #27 prok2 (ENSSPAG00000021249) Pinecone sodierfish MODERN SPECIES 19 mon1a (ENSMMDG00005008952) ENSMMDG00005008960 camkvb (ENSMMDG00005008983) SEMA3F (ENSMMDG00005008991) arl8bb (ENSMMDG00005008996) NAAA (ENSMMDG00005009008) bhlhe40 (ENSMMDG00005009011) ITPR1 (ENSMMDG00005009020) ENSMMDG00005009072 setmar (ENSMMDG00005009073) lrrn1 (ENSMMDG00005009074) ENSMMDG00005009079 trnt1 (ENSMMDG00005009082) arl6ip5a (ENSMMDG00005009086) #19 FRMD4B (ENSMMDG00005009095) #21 mitfa (ENSMMDG00005009103) #22 zgc:113054 (ENSMMDG00005009107) foxp1b (ENSMMDG00005009108) EIF4E3 (ENSMMDG00005009182) #26 gpr27 (ENSMMDG00005009185) #27 prok2 (ENSMMDG00005009188) rybpa (ENSMMDG00005009204) #29 shq1 (ENSMMDG00005009217) #30 gxylt2 (ENSMMDG00005009227) #31 ppp4r2b (ENSMMDG00005009228) #32 pdzrn3b (ENSMMDG00005009235) #33 ENSMMDG00005009427 ##37 ENSMMDG00005010692 ENSMMDG00005011751 cntn4 (ENSMMDG00005011797) EPB41L1 (ENSMMDG00005011814) Cod MODERN SPECIES 4 ENSGMOG00000009488 ENSGMOG00000003572 POC1A (ENSGMOG00000003598) ENSGMOG00000019731 DUSP7 (ENSGMOG00000003619) rpl29 (ENSGMOG00000003626) iars1 (ENSGMOG00000003632) atp2b2 (ENSGMOG00000003698) ENSGMOG00000003748 slc6a1b (ENSGMOG00000003780) ENSGMOG00000007467 ENSGMOG00000035810 ENSGMOG00000007460 arl6ip5a (ENSGMOG00000007454) #19 FRMD4B (ENSGMOG00000007429) #21 mitfa (ENSGMOG00000007421) #22 zgc:113054 (ENSGMOG00000007404) foxp1b (ENSGMOG00000007392) EIF4E3 (ENSGMOG00000007389) #26 gpr27 (ENSGMOG00000007387) #27 prok2 (ENSGMOG00000026303) RYBP (ENSGMOG00000031302) #29 shq1 (ENSGMOG00000007350) #30 gxylt2 (ENSGMOG00000007346) #31 ppp4r2b (ENSGMOG00000007337) #32 pdzrn3b (ENSGMOG00000023182) #33 ENSGMOG00000007303 ##37 ENSGMOG00000007280 ENSGMOG00000029697 ENSGMOG00000006963 ##37 cntn4 (ENSGMOG00000006949) Osteoglossocephalai ANCESTRAL SPECIES 1107 ENSGT00940000156326.b #22 ENSGT00390000011238 Osteoglossiformes ANCESTRAL SPECIES 28 ENSGT00390000005497 ENSGT00940000155048.d.b ENSGT00590000083094.a.a.c.b ENSGT01030000234637.b.d.a.a.b ENSGT00940000157279.j ENSGT00510000046608.B.t ENSGT00390000016228.b ENSGT00940000153629.a.a.a ENSGT00940000155820.b #8 ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT00940000156326.b #22 ENSGT00940000165920.a ENSGT00940000155865.c.a #26 ENSGT00390000013995.b.a.a #29 ENSGT00940000162859.p #32 ENSGT00940000155198.A.b ##37 ENSGT00940000165371.b ENSGT00940000164786.b ENSGT00940000158442 ENSGT01100000263545.a.b.c.a ENSGT00940000160361 ENSGT00940000156091.a ENSGT00940000153776.a.b ENSGT00940000159708 ENSGT00940000155448.c.b ENSGT00530000063759.b Asian bonytongue MODERN SPECIES 11 ENSSFOG00015020968 SYNPR (ENSSFOG00015020917) ATXN7 (ENSSFOG00015020910) ENSSFOG00015025196 prickle2a (ENSSFOG00015029054) MAGI1 (ENSSFOG00015020854) #8 ENSSFOG00015028939 kbtbd8 (ENSSFOG00015026870) #11 slc16a7 (ENSSFOG00015020802) TAFA1 (ENSSFOG00015020770) #13 tafa4b (ENSSFOG00015020753) UBA3 (ENSSFOG00015020666) #18 arl6ip5b (ENSSFOG00015026174) #19 LMOD3 (ENSSFOG00015020628) #20 ENSSFOG00015028695 MITF (ENSSFOG00015026327) #22 ENSSFOG00015020554 eif4e3 (ENSSFOG00015029780) #26 rybpb (ENSSFOG00015025246) #29 ppp4r2a (ENSSFOG00015020511) #32 PDZRN3 (ENSSFOG00015024646) #33 CNTN4 (ENSSFOG00015020161) ##37 ENSSFOG00015019983 ENSSFOG00015019933 ENSSFOG00015019810 ENSSFOG00015019760 sgk2a (ENSSFOG00015019734) L3MBTL1 (ENSSFOG00015019701) srsf6a (ENSSFOG00015019681) snx21 (ENSSFOG00015025990) ENSSFOG00015033018 P. kingsleyae MODERN SPECIES 90 PTPRG (ENSPKIG00000024953) ENSPKIG00000024883 SYNPR (ENSPKIG00000024844) ATXN7 (ENSPKIG00000024831) PSMD6 (ENSPKIG00000024819) ENSPKIG00000024813 PRICKLE2 (ENSPKIG00000024795) ENSPKIG00000024778 MAGI1 (ENSPKIG00000024736) #8 slc16a7 (ENSPKIG00000024707) TAFA1 (ENSPKIG00000024695) #13 UBA3 (ENSPKIG00000024656) #18 arl6ip5b (ENSPKIG00000024630) #19 LMOD3 (ENSPKIG00000024622) #20 MITF (ENSPKIG00000024589) #22 ENSPKIG00000024569 foxp1a (ENSPKIG00000024561) eif4e3 (ENSPKIG00000024547) #26 RYBP (ENSPKIG00000024534) #29 ppp4r2a (ENSPKIG00000024507) #32 ENSPKIG00000024491 ENSPKIG00000024481 gdi1 (ENSPKIG00000024468) atp6ap1a (ENSPKIG00000024454) rpl10 (ENSPKIG00000024440) ENSPKIG00000024429 ENSPKIG00000024420 ENSPKIG00000024408 ENSPKIG00000024388 atp2b3a (ENSPKIG00000024312) Clupeocephala ANCESTRAL SPECIES ENSGT00940000156326.b #22 Otomorpha ANCESTRAL SPECIES ENSGT00940000156326.b #22 Otophysi ANCESTRAL SPECIES ENSGT00940000156326.b #22 Characiphysae ANCESTRAL SPECIES ENSGT00940000156326.b #22 Characiphysae_b ANCESTRAL SPECIES ENSGT00940000156326.b #22 Characoidei ANCESTRAL SPECIES ENSGT00940000156326.b #22 Mexicana tetra MODERN SPECIES 135 ENSAMXG00000025836 gnat1 (ENSAMXG00000036412) edem1 (ENSAMXG00000017128) arl8ba (ENSAMXG00000030683) tnfrsf18 (ENSAMXG00000029388) ENSAMXG00000038413 tcta (ENSAMXG00000043663) glyctk (ENSAMXG00000041594) lrrn1 (ENSAMXG00000025835) ENSAMXG00000033219 trnt1 (ENSAMXG00000003960) arl6ip5a (ENSAMXG00000036901) #19 FRMD4B (ENSAMXG00000039544) #21 ENSAMXG00000030118 ENSAMXG00000037745 mitfa (ENSAMXG00000042077) #22 ENSAMXG00000004719 zgc:113054 (ENSAMXG00000044069) mdfic2 (ENSAMXG00000029429) #23 foxp1b (ENSAMXG00000015047) Clupeiformes ANCESTRAL SPECIES 7 ENSGT00940000165936 ENSGT00980000202345 ENSGT00530000063320.A.j ENSGT00940000154098.b ENSGT00940000156659 ENSGT00940000162989.f.a.b ENSGT00940000157024.k.b ENSGT00940000154738.b ENSGT00940000164303.b.b ENSGT00940000162607.a #13 ENSGT00940000155644.b.a.b ENSGT00550000074831.l #18 ENSGT00390000008631.a.o.b #19 ENSGT00940000159731 #20 ENSGT01020000230354.A.a.b #21 ENSGT00940000156326.b #22 ENSGT00730000111641.a #23 ENSGT00940000165920.a ENSGT00940000155865.c.a #26 ENSGT01100000263544.c.a.b.b ENSGT00390000002307.e ENSGT00940000159931.e ENSGT00940000158061.a ENSGT00950000183072.b.a ENSGT00940000157629 ENSGT00940000160106 ENSGT00390000000685 ENSGT00610000087489 ENSGT00950000182882.A.a.i.b ENSGT00390000008169 ENSGT00940000154610.e.b.a Denticle herring MODERN SPECIES 1 ENSDCDG00000014587 mfsd4ab (ENSDCDG00000014588) lemd1 (ENSDCDG00000014593) pm20d1.2 (ENSDCDG00000014598) ENSDCDG00000014685 ENSDCDG00000017007 NFASC (ENSDCDG00000017906) ENSDCDG00000018226 slc16a7 (ENSDCDG00000018233) TAFA1 (ENSDCDG00000018408) #13 TAFA3 (ENSDCDG00000018412) UBA3 (ENSDCDG00000018430) #18 arl6ip5b (ENSDCDG00000019614) #19 LMOD3 (ENSDCDG00000019617) #20 FRMD4B (ENSDCDG00000019629) #21 MITF (ENSDCDG00000019641) #22 ENSDCDG00000019714 #23 foxp1a (ENSDCDG00000019750) eif4e3 (ENSDCDG00000021142) #26 rybpa (ENSDCDG00000021143) #29 SLC26A9 (ENSDCDG00000021145) slc48a1a (ENSDCDG00000021146) RAPGEF3 (ENSDCDG00000021172) itga5 (ENSDCDG00000021261) CSRNP2 (ENSDCDG00000021500) TFCP2 (ENSDCDG00000021532) pou6f1 (ENSDCDG00000022264) dazap2 (ENSDCDG00000022266) ENSDCDG00000022270 bin2a (ENSDCDG00000022272) ENSDCDG00000022274 Atlantic herring MODERN SPECIES 20 ENSCHAG00000026692 mfsd4ab (ENSCHAG00000026690) lemd1 (ENSCHAG00000026684) pm20d1.2 (ENSCHAG00000026648) chia.4 (ENSCHAG00000026559) ENSCHAG00000026450 NFASC (ENSCHAG00000023886) ENSCHAG00000023706 slc16a7 (ENSCHAG00000023605) TAFA1 (ENSCHAG00000023591) #13 TAFA3 (ENSCHAG00000023583) UBA3 (ENSCHAG00000023367) #18 arl6ip5b (ENSCHAG00000023343) #19 LMOD3 (ENSCHAG00000023339) #20 FRMD4B (ENSCHAG00000023105) #21 MITF (ENSCHAG00000023027) #22 ENSCHAG00000023012 foxp1a (ENSCHAG00000022946) eif4e3 (ENSCHAG00000022905) #26 ENSCHAG00000022899 rybpa (ENSCHAG00000022891) #29 SLC26A9 (ENSCHAG00000022875) slc48a1a (ENSCHAG00000022867) RAPGEF3 (ENSCHAG00000021231) ENSCHAG00000021125 tfip11 (ENSCHAG00000021065) prim1 (ENSCHAG00000021022) rnd1a (ENSCHAG00000021003) YTHDF1 (ENSCHAG00000020969) bhlhe23 (ENSCHAG00000020960) slc17a9b (ENSCHAG00000020857) Spotted gar MODERN SPECIES 671 magi1b (ENSLOCG00000010248) #8 slc25a26 (ENSLOCG00000010233) #9 LRIG1 (ENSLOCG00000010211) #10 ENSLOCG00000010198 kbtbd8 (ENSLOCG00000010195) #11 slc16a7 (ENSLOCG00000010177) suclg2 (ENSLOCG00000010157) #12 ENSLOCG00000010154 TAFA4 (ENSLOCG00000010139) #15 EOGT (ENSLOCG00000010125) #16 tmf1 (ENSLOCG00000010119) #17 uba3 (ENSLOCG00000010113) #18 arl6ip5b (ENSLOCG00000010101) #19 LMOD3 (ENSLOCG00000010083) #20 FRMD4B (ENSLOCG00000010065) #21 mitfb (ENSLOCG00000010058) #22 ENSLOCG00000010050 zgc:113054 (ENSLOCG00000010041) mdfic2 (ENSLOCG00000010038) #23 foxp1b (ENSLOCG00000010009) eif4e3 (ENSLOCG00000010001) #26 gpr27 (ENSLOCG00000018245) #27 prok2 (ENSLOCG00000009991) ENSLOCG00000018244 rybpa (ENSLOCG00000009980) #29 shq1 (ENSLOCG00000009970) #30 gxylt2 (ENSLOCG00000009958) #31 ppp4r2b (ENSLOCG00000009942) #32 ENSLOCG00000009926 pdzrn3b (ENSLOCG00000009917) #33 ENSLOCG00000009897 ##37 Reedfish MODERN SPECIES 9 IP6K1 (ENSECRG00000017008) ENSECRG00000016984 ENSECRG00000016944 KLHL10 (ENSECRG00000016914) AMIGO3 (ENSECRG00000016900) RNF123 (ENSECRG00000016662) gmppb (ENSECRG00000016557) uba3 (ENSECRG00000016451) #18 arl6ip5b (ENSECRG00000016417) #19 LMOD3 (ENSECRG00000016395) #20 ENSECRG00000016376 ENSECRG00000016342 pdhb (ENSECRG00000016286) kctd6a (ENSECRG00000016264) FRMD4B (ENSECRG00000016187) #21 mitfb (ENSECRG00000016159) #22 BRK1 (ENSECRG00000016137) rbm5 (ENSECRG00000016030) slc38a3a (ENSECRG00000015959) gnai2a (ENSECRG00000015887) CDHR4 (ENSECRG00000015800) inka1a (ENSECRG00000015768) ENSECRG00000015699 traip (ENSECRG00000015662) ENSECRG00000015632 camkvb (ENSECRG00000015591) ENSECRG00000015505 mon1a (ENSECRG00000015467) ENSECRG00000015366 sema3fa (ENSECRG00000015295) gnat1 (ENSECRG00000015170) Elephant shark MODERN SPECIES 1523 ADAMTS9 (ENSCMIG00000006593) magi1b (ENSCMIG00000006716) #8 slc25a26 (ENSCMIG00000006796) #9 LRIG1 (ENSCMIG00000006843) #10 kbtbd8 (ENSCMIG00000006920) #11 ENSCMIG00000006922 suclg2 (ENSCMIG00000006945) #12 TAFA1 (ENSCMIG00000006997) #13 TAFA4 (ENSCMIG00000007000) #15 EOGT (ENSCMIG00000007011) #16 tmf1 (ENSCMIG00000007054) #17 uba3 (ENSCMIG00000007150) #18 arl6ip5b (ENSCMIG00000007190) #19 LMOD3 (ENSCMIG00000007192) #20 FRMD4B (ENSCMIG00000007196) #21 mitfb (ENSCMIG00000007207) #22 flot1b (ENSCMIG00000007219) FOXP1 (ENSCMIG00000007232) #24 CNTN4 (ENSCMIG00000007260) #37 pdzrn3b (ENSCMIG00000007350) #33 ENSCMIG00000007355 #32 gxylt2 (ENSCMIG00000007364) #31 shq1 (ENSCMIG00000007369) #30 rybpb (ENSCMIG00000007373) #29 ENSCMIG00000007375 gpr27 (ENSCMIG00000007378) #27 eif4e3 (ENSCMIG00000007381) #26 ENSCMIG00000007385 Cyclostomata ANCESTRAL SPECIES ENSGT00940000156326 #22 Lamprey MODERN SPECIES 917 MITF (ENSPMAG00000004927) #22 ENSPMAG00000004937