Euteleostomi	ANCESTRAL SPECIES	143							ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00530000063825.A.d	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068	ENSGT00940000162679
Sarcopterygii	ANCESTRAL SPECIES	47	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00530000063825.A.d	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Tetrapoda	ANCESTRAL SPECIES	29	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Amniota	ANCESTRAL SPECIES	17	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Mammalia	ANCESTRAL SPECIES	32	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Theria	ANCESTRAL SPECIES	18	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Eutheria	ANCESTRAL SPECIES	6	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000164266
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Primates	ANCESTRAL SPECIES	8	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00530000063666.a.m.b	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00910000148348	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Hominoidea	ANCESTRAL SPECIES	8	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00530000063666.a.m.b	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00390000004524.c.a.a.b.a.b #16	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00910000148348	ENSGT00390000012721.a #26	ENSGT00940000167537 #27	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36
Gibbon	MODERN SPECIES	11	GPR151 (ENSNLEG00000018479) #7	TCERG1 (ENSNLEG00000009901) #8	POU4F3 (ENSNLEG00000009898) #9	RBM27 (ENSNLEG00000009886) #10	LARS1 (ENSNLEG00000009816) #11	PLAC8L1 (ENSNLEG00000009813) #12	SH3RF2 (ENSNLEG00000009812) #13	GRXCR2 (ENSNLEG00000009806) #14	PRELID2 (ENSNLEG00000034550) #15	ENSNLEG00000034701 #16	KCTD16 (ENSNLEG00000033715) #17	YIPF5 (ENSNLEG00000009786) #18	HMHB1 (ENSNLEG00000027190) #19	ENSNLEG00000030931 #20	ENSNLEG00000036034 #21	NR3C1 (ENSNLEG00000009765) #22	ENSNLEG00000009755 #23	FGF1 (ENSNLEG00000009747) #24	SPRY4 (ENSNLEG00000009744) #25	NDFIP1 (ENSNLEG00000009739) #26	ENSNLEG00000029435 #27	GNPDA1 (ENSNLEG00000032180) #28	RNF14 (ENSNLEG00000009711) #29	PCDH12 (ENSNLEG00000009706) #30	DELE1 (ENSNLEG00000009687) #31	PCDH1 (ENSNLEG00000009682) #32	ARAP3 (ENSNLEG00000009656) #33	FCHSD1 (ENSNLEG00000009642) #34	RELL2 (ENSNLEG00000009626) #35	HDAC3 (ENSNLEG00000009594) #36	DIAPH1 (ENSNLEG00000009546) #37
Hominidae	ANCESTRAL SPECIES	7	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00530000063666.a.m.b	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00390000004524.c.a.a.b.a.b #16	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00910000148348	ENSGT00390000012721.a #26	ENSGT00940000167537 #27	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00530000063666.a.m.b	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00390000004524.c.a.a.b.a.b #16	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00910000148348	ENSGT00390000012721.a #26	ENSGT00940000167537 #27	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00390000011666.x.b.k	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00530000063666.a.m.b	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00390000004524.c.a.a.b.a.b #16	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00910000148348	ENSGT00390000012721.a #26	ENSGT00940000167537 #27	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00390000011666.x.b.k	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35
Pan	ANCESTRAL SPECIES	10	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00530000063666.a.m.b	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00390000004524.c.a.a.b.a.b #16	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00910000148348	ENSGT00390000012721.a #26	ENSGT00940000167537 #27	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00390000011666.x.b.k	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35
Bonobo	MODERN SPECIES	18	ENSPPAG00000037880	GPR151 (ENSPPAG00000016556) #7	TCERG1 (ENSPPAG00000033605) #8	POU4F3 (ENSPPAG00000043642) #9	RBM27 (ENSPPAG00000039646) #10	LARS1 (ENSPPAG00000027964) #11	PLAC8L1 (ENSPPAG00000036320) #12	ENSPPAG00000013764	SH3RF2 (ENSPPAG00000042408) #13	GRXCR2 (ENSPPAG00000020105) #14	PRELID2 (ENSPPAG00000030896) #15	ENSPPAG00000043741 #16	KCTD16 (ENSPPAG00000039008) #17	YIPF5 (ENSPPAG00000041251) #18	ENSPPAG00000038465 #20	NR3C1 (ENSPPAG00000039198) #22	ARHGAP26 (ENSPPAG00000023917) #23	FGF1 (ENSPPAG00000040850) #24	SPRY4 (ENSPPAG00000037403) #25	NDFIP1 (ENSPPAG00000026599) #26	ENSPPAG00000024231	ENSPPAG00000041886 #27	GNPDA1 (ENSPPAG00000036920) #28	RNF14 (ENSPPAG00000027838) #29	PCDH12 (ENSPPAG00000043492) #30	DELE1 (ENSPPAG00000043018) #31	ENSPPAG00000028850	PCDH1 (ENSPPAG00000042443) #32	ARAP3 (ENSPPAG00000038396) #33	ENSPPAG00000040690 #34	RELL2 (ENSPPAG00000012297) #35
Chimpanzee	MODERN SPECIES	18	ENSPTRG00000028538	GPR151 (ENSPTRG00000017376) #7	TCERG1 (ENSPTRG00000017375) #8	POU4F3 (ENSPTRG00000017374) #9	RBM27 (ENSPTRG00000017373) #10	LARS1 (ENSPTRG00000017372) #11	PLAC8L1 (ENSPTRG00000017370) #12	ENSPTRG00000049462	SH3RF2 (ENSPTRG00000017369) #13	GRXCR2 (ENSPTRG00000028540) #14	PRELID2 (ENSPTRG00000017368) #15	KCTD16 (ENSPTRG00000017366) #17	YIPF5 (ENSPTRG00000017365) #18	HMHB1 (ENSPTRG00000048752) #19	ENSPTRG00000049901 #20	NR3C1 (ENSPTRG00000017363) #22	ARHGAP26 (ENSPTRG00000017362) #23	FGF1 (ENSPTRG00000017361) #24	SPRY4 (ENSPTRG00000017360) #25	ENSPTRG00000051537	NDFIP1 (ENSPTRG00000017358) #26	ENSPTRG00000044712 #27	GNPDA1 (ENSPTRG00000017357) #28	RNF14 (ENSPTRG00000017356) #29	PCDH12 (ENSPTRG00000017355) #30	DELE1 (ENSPTRG00000017354) #31	ENSPTRG00000039515	PCDH1 (ENSPTRG00000040496) #32	ARAP3 (ENSPTRG00000017351) #33	FCHSD1 (ENSPTRG00000023689) #34	RELL2 (ENSPTRG00000017349) #35
Human	MODERN SPECIES	17	STK32A (ENSG00000169302)	PPP2R2B (ENSG00000156475)	GPR151 (ENSG00000173250) #7	TCERG1 (ENSG00000113649) #8	POU4F3 (ENSG00000091010) #9	RBM27 (ENSG00000091009) #10	ENSG00000275740	LARS1 (ENSG00000133706) #11	PLAC8L1 (ENSG00000173261) #12	SH3RF2 (ENSG00000156463) #13	GRXCR2 (ENSG00000204928) #14	PRELID2 (ENSG00000186314) #15	KCTD16 (ENSG00000183775) #17	YIPF5 (ENSG00000145817) #18	HMHB1 (ENSG00000158497) #19	NR3C1 (ENSG00000113580) #22	ARHGAP26 (ENSG00000145819) #23	FGF1 (ENSG00000113578) #24	SPRY4 (ENSG00000187678) #25	NDFIP1 (ENSG00000131507) #26	GNPDA1 (ENSG00000113552) #28	RNF14 (ENSG00000013561) #29	PCDH12 (ENSG00000113555) #30	DELE1 (ENSG00000081791) #31	PCDH1 (ENSG00000156453) #32	ARAP3 (ENSG00000120318) #33	FCHSD1 (ENSG00000197948) #34	RELL2 (ENSG00000164620) #35	HDAC3 (ENSG00000171720) #36	DIAPH1 (ENSG00000131504) #37	PCDHGC5 (ENSG00000240764)
Gorilla	MODERN SPECIES	18	STK32A (ENSGGOG00000004405)	PPP2R2B (ENSGGOG00000001873)	GPR151 (ENSGGOG00000012302) #7	TCERG1 (ENSGGOG00000003329) #8	POU4F3 (ENSGGOG00000012435) #9	RBM27 (ENSGGOG00000013312) #10	LARS1 (ENSGGOG00000004103) #11	PLAC8L1 (ENSGGOG00000008260) #12	ENSGGOG00000043036	SH3RF2 (ENSGGOG00000008250) #13	GRXCR2 (ENSGGOG00000013882) #14	KCTD16 (ENSGGOG00000012018) #17	YIPF5 (ENSGGOG00000006295) #18	HMHB1 (ENSGGOG00000007079) #19	ENSGGOG00000041404 #20	NR3C1 (ENSGGOG00000004334) #22	ARHGAP26 (ENSGGOG00000007019) #23	FGF1 (ENSGGOG00000025578) #24	SPRY4 (ENSGGOG00000016991) #25	ENSGGOG00000040833	NDFIP1 (ENSGGOG00000004879) #26	ENSGGOG00000042481 #27	GNPDA1 (ENSGGOG00000008969) #28	RNF14 (ENSGGOG00000008542) #29	PCDH12 (ENSGGOG00000013017) #30	DELE1 (ENSGGOG00000013008) #31	ENSGGOG00000024734	PCDH1 (ENSGGOG00000000997) #32	ARAP3 (ENSGGOG00000016409) #33	FCHSD1 (ENSGGOG00000016391) #34	RELL2 (ENSGGOG00000016383) #35
Orangutan	MODERN SPECIES	18	DPYSL3 (ENSPPYG00000015915)	STK32A (ENSPPYG00000015914)	PPP2R2B (ENSPPYG00000015913)	GPR151 (ENSPPYG00000015912) #7	TCERG1 (ENSPPYG00000015911) #8	POU4F3 (ENSPPYG00000015910) #9	ENSPPYG00000030925	RBM27 (ENSPPYG00000015909) #10	LARS1 (ENSPPYG00000015908) #11	SH3RF2 (ENSPPYG00000015906) #13	GRXCR2 (ENSPPYG00000015905) #14	PRELID2 (ENSPPYG00000034671) #15	KCTD16 (ENSPPYG00000015903) #17	YIPF5 (ENSPPYG00000038760) #18	HMHB1 (ENSPPYG00000015901) #19	NR3C1 (ENSPPYG00000015900) #22	ARHGAP26 (ENSPPYG00000015899) #23	FGF1 (ENSPPYG00000015898) #24	SPRY4 (ENSPPYG00000015897) #25	ENSPPYG00000037313	NDFIP1 (ENSPPYG00000015896) #26	GNPDA1 (ENSPPYG00000015895) #28	RNF14 (ENSPPYG00000015894) #29	PCDH12 (ENSPPYG00000015893) #30	DELE1 (ENSPPYG00000015892) #31	PCDH1 (ENSPPYG00000029866) #32	ARAP3 (ENSPPYG00000029924) #33	FCHSD1 (ENSPPYG00000015891) #34	RELL2 (ENSPPYG00000015890) #35	HDAC3 (ENSPPYG00000015889) #36	DIAPH1 (ENSPPYG00000015888) #37
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00530000063666.a.m.b	ENSGT00940000160067 #13	ENSGT00530000063666.a.n	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00960000187994	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00910000148348	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00530000063666.a.n	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00960000187994	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00910000148348	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Vervet Monkey	MODERN SPECIES	15	PPP2R2B (ENSCSAG00000012240)	GPR151 (ENSCSAG00000019716) #7	TCERG1 (ENSCSAG00000012253) #8	POU4F3 (ENSCSAG00000012256) #9	RBM27 (ENSCSAG00000012270) #10	ENSCSAG00000019715	LARS1 (ENSCSAG00000012280) #11	PLAC8L1 (ENSCSAG00000012285) #12	SH3RF2 (ENSCSAG00000012292) #13	GRXCR2 (ENSCSAG00000012295) #14	PRELID2 (ENSCSAG00000012305) #15	KCTD16 (ENSCSAG00000000482) #17	YIPF5 (ENSCSAG00000012338) #18	HMHB1 (ENSCSAG00000012344) #19	ENSCSAG00000012347	NR3C1 (ENSCSAG00000012355) #22	ARHGAP26 (ENSCSAG00000012374) #23	FGF1 (ENSCSAG00000012382) #24	SPRY4 (ENSCSAG00000012384) #25	NDFIP1 (ENSCSAG00000012390) #26	GNPDA1 (ENSCSAG00000012395) #28	RNF14 (ENSCSAG00000012400) #29	PCDH12 (ENSCSAG00000012406) #30	DELE1 (ENSCSAG00000012414) #31	PCDH1 (ENSCSAG00000012421) #32	ENSCSAG00000000483	ARAP3 (ENSCSAG00000012438) #33	FCHSD1 (ENSCSAG00000012453) #34	RELL2 (ENSCSAG00000012463) #35	ENSCSAG00000012474	DIAPH1 (ENSCSAG00000012491) #37
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00530000063666.a.n	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00960000187994	ENSGT00940000156385 #22	ENSGT00910000147553	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00910000148348	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36
Macaca	ANCESTRAL SPECIES	7	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00530000063666.a.n	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00940000156385 #22	ENSGT00910000147553	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00910000148348	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36
Pig-tailed macaque	MODERN SPECIES	383	TCERG1 (ENSMNEG00000011442) #8	POU4F3 (ENSMNEG00000043322) #9	RBM27 (ENSMNEG00000037798) #10	LARS1 (ENSMNEG00000044014) #11	PLAC8L1 (ENSMNEG00000045406) #12	SH3RF2 (ENSMNEG00000015276) #13	ENSMNEG00000031297	GRXCR2 (ENSMNEG00000040216) #14	PRELID2 (ENSMNEG00000035321) #15	ENSMNEG00000038711 #16	ENSMNEG00000011852	KCTD16 (ENSMNEG00000039497) #17	YIPF5 (ENSMNEG00000039921) #18	HMHB1 (ENSMNEG00000028636) #19	ENSMNEG00000001356 #20	NR3C1 (ENSMNEG00000033020) #22	ENSMNEG00000029836	ARHGAP26 (ENSMNEG00000040205) #23	FGF1 (ENSMNEG00000032265) #24	SPRY4 (ENSMNEG00000035869) #25	NDFIP1 (ENSMNEG00000039206) #26	GNPDA1 (ENSMNEG00000039381) #28	RNF14 (ENSMNEG00000041094) #29	PCDH12 (ENSMNEG00000036632) #30	DELE1 (ENSMNEG00000000602) #31	PCDH1 (ENSMNEG00000030768) #32	ARAP3 (ENSMNEG00000039626) #33	FCHSD1 (ENSMNEG00000042045) #34	RELL2 (ENSMNEG00000031835) #35	HDAC3 (ENSMNEG00000030557) #36	DIAPH1 (ENSMNEG00000034458) #37
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.b.b.a.a	ENSGT00950000183055.b.b #25	ENSGT00910000148348	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36
Rhesus	MODERN SPECIES	16	STK32A (ENSMMUG00000019290)	ENSMMUG00000063348	PPP2R2B (ENSMMUG00000020465)	GPR151 (ENSMMUG00000023287) #7	TCERG1 (ENSMMUG00000023288) #8	RBM27 (ENSMMUG00000004476) #10	LARS1 (ENSMMUG00000029787) #11	PLAC8L1 (ENSMMUG00000006551) #12	SH3RF2 (ENSMMUG00000018386) #13	GRXCR2 (ENSMMUG00000049310) #14	PRELID2 (ENSMMUG00000013588) #15	ENSMMUG00000059831	KCTD16 (ENSMMUG00000029791) #17	YIPF5 (ENSMMUG00000020763) #18	HMHB1 (ENSMMUG00000046781) #19	NR3C1 (ENSMMUG00000000421) #22	ARHGAP26 (ENSMMUG00000000419) #23	FGF1 (ENSMMUG00000057828) #24	ENSMMUG00000060402	SPRY4 (ENSMMUG00000014175) #25	ENSMMUG00000059206	NDFIP1 (ENSMMUG00000016787) #26	GNPDA1 (ENSMMUG00000009770) #28	RNF14 (ENSMMUG00000009768) #29	PCDH12 (ENSMMUG00000006291) #30	DELE1 (ENSMMUG00000006287) #31	PCDH1 (ENSMMUG00000008710) #32	ARAP3 (ENSMMUG00000000465) #33	FCHSD1 (ENSMMUG00000012593) #34	RELL2 (ENSMMUG00000012591) #35	HDAC3 (ENSMMUG00000012588) #36
Crab-eating macaque	MODERN SPECIES	16	ENSMFAG00000055938	RBM27 (ENSMFAG00000042337) #10	LARS1 (ENSMFAG00000038685) #11	PLAC8L1 (ENSMFAG00000041173) #12	SH3RF2 (ENSMFAG00000042350) #13	ENSMFAG00000030536 #14	PRELID2 (ENSMFAG00000032007) #15	KCTD16 (ENSMFAG00000031599) #17	YIPF5 (ENSMFAG00000001553) #18	HMHB1 (ENSMFAG00000004056) #19	ENSMFAG00000055681 #20	ENSMFAG00000049129	ENSMFAG00000056016	ENSMFAG00000056491	ENSMFAG00000053370	NR3C1 (ENSMFAG00000039004) #22	ARHGAP26 (ENSMFAG00000002069) #23	ENSMFAG00000049353	ENSMFAG00000031417 #24	ENSMFAG00000052119	SPRY4 (ENSMFAG00000033414) #25	ENSMFAG00000058025	NDFIP1 (ENSMFAG00000039431) #26	GNPDA1 (ENSMFAG00000032994) #28	RNF14 (ENSMFAG00000039262) #29	PCDH12 (ENSMFAG00000036923) #30	DELE1 (ENSMFAG00000040008) #31	PCDH1 (ENSMFAG00000035695) #32	ARAP3 (ENSMFAG00000002504) #33	FCHSD1 (ENSMFAG00000033954) #34	RELL2 (ENSMFAG00000033304) #35
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00960000187994	ENSGT00940000156385 #22	ENSGT00910000147553	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00910000148348	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36
Cercopithecinae_d	ANCESTRAL SPECIES	18	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00960000187994	ENSGT00940000156385 #22	ENSGT00910000147553	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Sooty mangabey	MODERN SPECIES	309	POU4F3 (ENSCATG00000036026) #9	RBM27 (ENSCATG00000035545) #10	LARS1 (ENSCATG00000033463) #11	PLAC8L1 (ENSCATG00000029676) #12	ENSCATG00000041877	SH3RF2 (ENSCATG00000031515) #13	ENSCATG00000030405 #14	PRELID2 (ENSCATG00000032890) #15	ENSCATG00000022183	ENSCATG00000022370	KCTD16 (ENSCATG00000042995) #17	YIPF5 (ENSCATG00000044741) #18	HMHB1 (ENSCATG00000042712) #19	ENSCATG00000021589 #20	ENSCATG00000030336	NR3C1 (ENSCATG00000041497) #22	ENSCATG00000043869	ARHGAP26 (ENSCATG00000034757) #23	FGF1 (ENSCATG00000032292) #24	SPRY4 (ENSCATG00000034033) #25	NDFIP1 (ENSCATG00000033133) #26	GNPDA1 (ENSCATG00000031183) #28	RNF14 (ENSCATG00000001829) #29	PCDH12 (ENSCATG00000038804) #30	DELE1 (ENSCATG00000017255) #31	PCDH1 (ENSCATG00000034071) #32	ARAP3 (ENSCATG00000042323) #33	FCHSD1 (ENSCATG00000044488) #34	RELL2 (ENSCATG00000023656) #35	HDAC3 (ENSCATG00000017981) #36	DIAPH1 (ENSCATG00000035236) #37
Drill	MODERN SPECIES	1127											ENSMLEG00000018907	KCTD16 (ENSMLEG00000044171) #17	YIPF5 (ENSMLEG00000025191) #18	HMHB1 (ENSMLEG00000036049) #19	ENSMLEG00000028169 #20	NR3C1 (ENSMLEG00000032761) #22	ENSMLEG00000044458	ARHGAP26 (ENSMLEG00000028231) #23	FGF1 (ENSMLEG00000006443) #24	SPRY4 (ENSMLEG00000039395) #25	NDFIP1 (ENSMLEG00000029860) #26
Olive baboon	MODERN SPECIES	15	DPYSL3 (ENSPANG00000013090)	STK32A (ENSPANG00000002755)	PPP2R2B (ENSPANG00000019017)	GPR151 (ENSPANG00000016847) #7	TCERG1 (ENSPANG00000026072) #8	POU4F3 (ENSPANG00000048660) #9	RBM27 (ENSPANG00000015776) #10	LARS1 (ENSPANG00000002663) #11	SH3RF2 (ENSPANG00000007890) #13	PRELID2 (ENSPANG00000008877) #15	ENSPANG00000041262	KCTD16 (ENSPANG00000010407) #17	YIPF5 (ENSPANG00000009344) #18	HMHB1 (ENSPANG00000029402) #19	ENSPANG00000049004	NR3C1 (ENSPANG00000003021) #22	ARHGAP26 (ENSPANG00000000313) #23	FGF1 (ENSPANG00000000312) #24	SPRY4 (ENSPANG00000003368) #25	ENSPANG00000049145	NDFIP1 (ENSPANG00000006032) #26	ENSPANG00000046300	ENSPANG00000044275	GNPDA1 (ENSPANG00000014429) #28	RNF14 (ENSPANG00000012016) #29	PCDH12 (ENSPANG00000006995) #30	DELE1 (ENSPANG00000002756) #31	PCDH1 (ENSPANG00000009429) #32	ARAP3 (ENSPANG00000024671) #33	FCHSD1 (ENSPANG00000012206) #34	RELL2 (ENSPANG00000012116) #35
Rhinopithecus	ANCESTRAL SPECIES	17										ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00910000147098 #20	ENSGT00960000187994	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000009724.l.u.b.d.a	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Golden snub-nosed monkey	MODERN SPECIES	2661											KCTD16 (ENSRROG00000044265) #17	YIPF5 (ENSRROG00000020375) #18	HMHB1 (ENSRROG00000043817) #19	ENSRROG00000018303 #20	ENSRROG00000040452	NR3C1 (ENSRROG00000028481) #22	ARHGAP26 (ENSRROG00000042964) #23	FGF1 (ENSRROG00000033758) #24	SPRY4 (ENSRROG00000016713) #25	ENSRROG00000004036	NDFIP1 (ENSRROG00000041565) #26	GNPDA1 (ENSRROG00000038746) #28	RNF14 (ENSRROG00000030177) #29	PCDH12 (ENSRROG00000040813) #30	DELE1 (ENSRROG00000042641) #31	PCDH1 (ENSRROG00000038599) #32	ARAP3 (ENSRROG00000038877) #33	FCHSD1 (ENSRROG00000041211) #34	RELL2 (ENSRROG00000031324) #35	HDAC3 (ENSRROG00000026471) #36	DIAPH1 (ENSRROG00000036504) #37
Black snub-nosed monkey	MODERN SPECIES	438													HMHB1 (ENSRBIG00000035788) #19	ENSRBIG00000027656 #20	ENSRBIG00000029184	NR3C1 (ENSRBIG00000026391) #22	ENSRBIG00000032965 #23	FGF1 (ENSRBIG00000028697) #24	SPRY4 (ENSRBIG00000042786) #25	ENSRBIG00000001550	NDFIP1 (ENSRBIG00000031783) #26	GNPDA1 (ENSRBIG00000027907) #28	RNF14 (ENSRBIG00000032154) #29	PCDH12 (ENSRBIG00000036991) #30	DELE1 (ENSRBIG00000032149) #31	PCDH1 (ENSRBIG00000027936) #32	ARAP3 (ENSRBIG00000044040) #33	FCHSD1 (ENSRBIG00000027201) #34	RELL2 (ENSRBIG00000025892) #35	HDAC3 (ENSRBIG00000040336) #36	DIAPH1 (ENSRBIG00000041077) #37
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000154268.f.i.a.b	ENSGT00980000200893	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Cebidae	ANCESTRAL SPECIES	6	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000154268.f.i.a.b	ENSGT00980000200893	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000163745
Marmoset	MODERN SPECIES	11	RBM27 (ENSCJAG00000021308) #10	ENSCJAG00000080022	LARS1 (ENSCJAG00000021314) #11	PLAC8L1 (ENSCJAG00000021335) #12	SH3RF2 (ENSCJAG00000021336) #13	GRXCR2 (ENSCJAG00000047925) #14	ENSCJAG00000084165	ENSCJAG00000086865	ENSCJAG00000085996	KCTD16 (ENSCJAG00000021346) #17	YIPF5 (ENSCJAG00000021347) #18	ENSCJAG00000082836	ENSCJAG00000084331	ENSCJAG00000085779	ENSCJAG00000086268	NR3C1 (ENSCJAG00000018337) #22	ENSCJAG00000046005	ARHGAP26 (ENSCJAG00000018315) #23	ENSCJAG00000075128 #24	SPRY4 (ENSCJAG00000044286) #25	ENSCJAG00000062359	NDFIP1 (ENSCJAG00000018271) #26	ENSCJAG00000012264	GNPDA1 (ENSCJAG00000018247) #28	RNF14 (ENSCJAG00000018220) #29	PCDH12 (ENSCJAG00000043015) #30	DELE1 (ENSCJAG00000018193) #31	PCDH1 (ENSCJAG00000018174) #32	ENSCJAG00000078233	ARAP3 (ENSCJAG00000018098) #33	FCHSD1 (ENSCJAG00000018093) #34
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT00910000146804	ENSGT00390000000618	ENSGT00560000078590	ENSGT00940000159354	ENSGT00390000015384	ENSGT00940000159491	ENSGT00940000160864 #12	ENSGT00530000063666.a.n	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.h #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000163745
Bolivian squirrel monkey	MODERN SPECIES	43	SLC25A48 (ENSSBOG00000033874)	IL9 (ENSSBOG00000030901)	ENSSBOG00000027112	ENSSBOG00000032714	ENSSBOG00000029526 #12	ENSSBOG00000029875	SH3RF2 (ENSSBOG00000024803) #13	GRXCR2 (ENSSBOG00000021802) #14	PRELID2 (ENSSBOG00000020144) #15	ENSSBOG00000017380	ENSSBOG00000033275	ENSSBOG00000023943	KCTD16 (ENSSBOG00000017670) #17	YIPF5 (ENSSBOG00000034858) #18	ENSSBOG00000031947	NR3C1 (ENSSBOG00000028631) #22	ARHGAP26 (ENSSBOG00000025886) #23	FGF1 (ENSSBOG00000023066) #24	SPRY4 (ENSSBOG00000021373) #25	NDFIP1 (ENSSBOG00000034242) #26	GNPDA1 (ENSSBOG00000027619) #28	RNF14 (ENSSBOG00000032417) #29	ENSSBOG00000020130	PCDH12 (ENSSBOG00000027240) #30	DELE1 (ENSSBOG00000036078) #31	PCDH1 (ENSSBOG00000035615) #32	ARAP3 (ENSSBOG00000022198) #33	FCHSD1 (ENSSBOG00000026953) #34	RELL2 (ENSSBOG00000012587) #35	HDAC3 (ENSSBOG00000024636) #36	DIAPH1 (ENSSBOG00000026188) #37
Capuchin	MODERN SPECIES	76	ENSCCAG00000035191	ENSCCAG00000022482	ENSCCAG00000037271 #12	ENSCCAG00000031219	SH3RF2 (ENSCCAG00000028560) #13	GRXCR2 (ENSCCAG00000031158) #14	ENSCCAG00000000354 #15	ENSCCAG00000010894	ENSCCAG00000030952 ##18	ENSCCAG00000019307	ENSCCAG00000031323	ENSCCAG00000026586	KCTD16 (ENSCCAG00000028072) #17	YIPF5 (ENSCCAG00000036325) #18	HMHB1 (ENSCCAG00000026580) #19	NR3C1 (ENSCCAG00000019143) #22	ARHGAP26 (ENSCCAG00000034898) #23	FGF1 (ENSCCAG00000037765) #24	SPRY4 (ENSCCAG00000019276) #25	ENSCCAG00000036102 #26	GNPDA1 (ENSCCAG00000030002) #28	RNF14 (ENSCCAG00000034551) #29	PCDH12 (ENSCCAG00000030443) #30	DELE1 (ENSCCAG00000033469) #31	PCDH1 (ENSCCAG00000026190) #32	ARAP3 (ENSCCAG00000025982) #33	FCHSD1 (ENSCCAG00000033686) #34	RELL2 (ENSCCAG00000035587) #35	HDAC3 (ENSCCAG00000023377) #36	ENSCCAG00000019961	DIAPH1 (ENSCCAG00000023411) #37
Mas night monkey	MODERN SPECIES	966	TCERG1 (ENSANAG00000028973) #8	POU4F3 (ENSANAG00000037628) #9	ENSANAG00000029729	RBM27 (ENSANAG00000034039) #10	LARS1 (ENSANAG00000014375) #11	ENSANAG00000015519	PLAC8L1 (ENSANAG00000037249) #12	SH3RF2 (ENSANAG00000037988) #13	GRXCR2 (ENSANAG00000029301) #14	PRELID2 (ENSANAG00000037895) #15	ENSANAG00000037716	KCTD16 (ENSANAG00000026211) #17	YIPF5 (ENSANAG00000036994) #18	ENSANAG00000020874	ENSANAG00000021549	NR3C1 (ENSANAG00000027316) #22	ENSANAG00000029175 #23	FGF1 (ENSANAG00000030014) #24	ENSANAG00000037720	ENSANAG00000032884	SPRY4 (ENSANAG00000029641) #25	ENSANAG00000024141	NDFIP1 (ENSANAG00000028423) #26	GNPDA1 (ENSANAG00000032432) #28	RNF14 (ENSANAG00000025736) #29	ENSANAG00000021387	ENSANAG00000037813	PCDH12 (ENSANAG00000026229) #30	DELE1 (ENSANAG00000025276) #31	ENSANAG00000037296	PCDH1 (ENSANAG00000020835) #32
Tarsier	MODERN SPECIES	2419																NR3C1 (ENSTSYG00000013696) #22	ENSTSYG00000012294 #23
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B.m #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Lemuriformes	ANCESTRAL SPECIES	21	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000170092	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B.m #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Mouse lemur	MODERN SPECIES	10	DPYSL3 (ENSMICG00000009380)	STK32A (ENSMICG00000047836)	PPP2R2B (ENSMICG00000009366)	TCERG1 (ENSMICG00000009345) #8	POU4F3 (ENSMICG00000042032) #9	RBM27 (ENSMICG00000003262) #10	ENSMICG00000035589 #11	PLAC8L1 (ENSMICG00000041566) #12	SH3RF2 (ENSMICG00000027571) #13	GRXCR2 (ENSMICG00000003256) #14	ENSMICG00000033182	PRELID2 (ENSMICG00000003250) #15	KCTD16 (ENSMICG00000000382) #17	YIPF5 (ENSMICG00000033826) #18	ENSMICG00000046885	NR3C1 (ENSMICG00000009473) #22	ARHGAP26 (ENSMICG00000009460) #23	ENSMICG00000036985	FGF1 (ENSMICG00000029580) #24	ENSMICG00000047088	SPRY4 (ENSMICG00000047702) #25	NDFIP1 (ENSMICG00000030011) #26	ENSMICG00000046738	GNPDA1 (ENSMICG00000029750) #28	RNF14 (ENSMICG00000000403) #29	PCDH12 (ENSMICG00000000402) #30	DELE1 (ENSMICG00000035655) #31	PCDH1 (ENSMICG00000017453) #32	ARAP3 (ENSMICG00000017452) #33	FCHSD1 (ENSMICG00000017451) #34	RELL2 (ENSMICG00000017450) #35
Lemuriformes_a	ANCESTRAL SPECIES	13	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000170092	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B.m #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Coquerels sifaka	MODERN SPECIES	339													KCTD16 (ENSPCOG00000018703) #17	YIPF5 (ENSPCOG00000018721) #18	ENSPCOG00000018709	NR3C1 (ENSPCOG00000019178) #22	ARHGAP26 (ENSPCOG00000023541) #23	FGF1 (ENSPCOG00000016781) #24	SPRY4 (ENSPCOG00000023808) #25	NDFIP1 (ENSPCOG00000017185) #26	ENSPCOG00000020464 #28	RNF14 (ENSPCOG00000027762) #29	PCDH12 (ENSPCOG00000013562) #30	DELE1 (ENSPCOG00000017979) #31	PCDH1 (ENSPCOG00000017633) #32	ARAP3 (ENSPCOG00000024418) #33	FCHSD1 (ENSPCOG00000025414) #34	RELL2 (ENSPCOG00000018004) #35	HDAC3 (ENSPCOG00000006048) #36	DIAPH1 (ENSPCOG00000020269) #37	PCDHGB2 (ENSPCOG00000018667)
Greater bamboo lemur	MODERN SPECIES	284																NR3C1 (ENSPSMG00000022184) #22	ARHGAP26 (ENSPSMG00000022100) #23	ENSPSMG00000021944 #24	ENSPSMG00000021938	SPRY4 (ENSPSMG00000021924) #25	NDFIP1 (ENSPSMG00000021922) #26	GNPDA1 (ENSPSMG00000021905) #28	RNF14 (ENSPSMG00000021874) #29	PCDH12 (ENSPSMG00000021857) #30	DELE1 (ENSPSMG00000021844) #31	PCDH1 (ENSPSMG00000021806) #32	ARAP3 (ENSPSMG00000021735) #33	FCHSD1 (ENSPSMG00000021563) #34	RELL2 (ENSPSMG00000021453) #35	HDAC3 (ENSPSMG00000021427) #36	DIAPH1 (ENSPSMG00000021307) #37
Bushbaby	MODERN SPECIES	118	DPYSL3 (ENSOGAG00000013863)	STK32A (ENSOGAG00000013862)	PPP2R2B (ENSOGAG00000010873)	GPR151 (ENSOGAG00000009575) #7	TCERG1 (ENSOGAG00000025674) #8	POU4F3 (ENSOGAG00000026756) #9	RBM27 (ENSOGAG00000008758) #10	LARS1 (ENSOGAG00000008750) #11	SH3RF2 (ENSOGAG00000010029) #13	GRXCR2 (ENSOGAG00000010027) #14	PRELID2 (ENSOGAG00000010025) #15	KCTD16 (ENSOGAG00000001547) #17	ENSOGAG00000002243	YIPF5 (ENSOGAG00000001543) #18	ENSOGAG00000025196	NR3C1 (ENSOGAG00000003356) #22	ENSOGAG00000011397 #23	ENSOGAG00000024728 #23	FGF1 (ENSOGAG00000005081) #24	SPRY4 (ENSOGAG00000005080) #25	NDFIP1 (ENSOGAG00000015910) #26	GNPDA1 (ENSOGAG00000007303) #28	RNF14 (ENSOGAG00000003535) #29	PCDH12 (ENSOGAG00000029106) #30	DELE1 (ENSOGAG00000003528) #31	PCDH1 (ENSOGAG00000032935) #32	ARAP3 (ENSOGAG00000030775) #33	FCHSD1 (ENSOGAG00000032557) #34	RELL2 (ENSOGAG00000000607) #35	HDAC3 (ENSOGAG00000000605) #36	DIAPH1 (ENSOGAG00000000604) #37
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Glires	ANCESTRAL SPECIES	7	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Rodentia	ANCESTRAL SPECIES	7	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00930000151774	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Kangaroo rat	MODERN SPECIES	369															ENSDORG00000010001	ENSDORG00000024724 #22	Arhgap26 (ENSDORG00000003963) #23	Fgf1 (ENSDORG00000024781) #24	Spry4 (ENSDORG00000023209) #25	Ndfip1 (ENSDORG00000007475) #26	Gnpda1 (ENSDORG00000010857) #28	Rnf14 (ENSDORG00000010856) #29	ENSDORG00000028559	Dele1 (ENSDORG00000010853) #31	Pcdh1 (ENSDORG00000014608) #32	Arap3 (ENSDORG00000000511) #33	ENSDORG00000025409 #34	ENSDORG00000028995 #35	ENSDORG00000012591 #36	ENSDORG00000010244 #37	Pcdhgc4 (ENSDORG00000028491)
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000153773.a.a.b.e.a	ENSGT00930000151774	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Muroidea	ANCESTRAL SPECIES	4	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000153773.a.a.b.e.a	ENSGT00930000151774	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Muroidea_A	ANCESTRAL SPECIES	18	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000153773.a.a.b.e.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Cricetidae	ANCESTRAL SPECIES	18	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000153773.a.a.b.e.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Cricetidae_B	ANCESTRAL SPECIES	15	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000153773.a.a.b.e.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Northern American deer mouse	MODERN SPECIES	10	Dpysl3 (ENSPEMG00000000318)	Stk32a (ENSPEMG00000030820)	Ppp2r2b (ENSPEMG00000020739)	Gpr151 (ENSPEMG00000000286) #7	Tcerg1 (ENSPEMG00000005639) #8	Pou4f3 (ENSPEMG00000001569) #9	Rbm27 (ENSPEMG00000014312) #10	Lars (ENSPEMG00000010933) #11	Plac8l1 (ENSPEMG00000016274) #12	Sh3rf2 (ENSPEMG00000000187) #13	Grxcr2 (ENSPEMG00000014234) #14	Prelid2 (ENSPEMG00000016612) #15	Kctd16 (ENSPEMG00000017530) #17	Yipf5 (ENSPEMG00000025272) #18	Pabpc2 (ENSPEMG00000013149)	Nr3c1 (ENSPEMG00000015909) #22	Arhgap26 (ENSPEMG00000030033) #23	Fgf1 (ENSPEMG00000029130) #24	Spry4 (ENSPEMG00000028288) #25	ENSPEMG00000022079 #26	Gnpda1 (ENSPEMG00000010722) #28	Rnf14 (ENSPEMG00000020640) #29	Pcdh12 (ENSPEMG00000021046) #30	Dele1 (ENSPEMG00000017454) #31	Pcdh1 (ENSPEMG00000023621) #32	Arap3 (ENSPEMG00000017354) #33	Fchsd1 (ENSPEMG00000022913) #34	Rell2 (ENSPEMG00000020331) #35	Hdac3 (ENSPEMG00000023895) #36	Diaph1 (ENSPEMG00000020309) #37	Pcdhgc5 (ENSPEMG00000000085)
Prairie vole	MODERN SPECIES	5	Ppp2r2b (ENSMOCG00000011221)	Gpr151 (ENSMOCG00000010704) #7	Tcerg1 (ENSMOCG00000021988) #8	Pou4f3 (ENSMOCG00000014304) #9	Rbm27 (ENSMOCG00000019479) #10	Lars (ENSMOCG00000002092) #11	Plac8l1 (ENSMOCG00000006546) #12	Sh3rf2 (ENSMOCG00000017019) #13	Grxcr2 (ENSMOCG00000019868) #14	Prelid2 (ENSMOCG00000016938) #15	ENSMOCG00000018520	Kctd16 (ENSMOCG00000000822) #17	Yipf5 (ENSMOCG00000019882) #18	ENSMOCG00000017913	Pabpc2 (ENSMOCG00000001354)	ENSMOCG00000020336 #22	ENSMOCG00000013962	Arhgap26 (ENSMOCG00000018682) #23	Fgf1 (ENSMOCG00000018542) #24	Spry4 (ENSMOCG00000011998) #25	Ndfip1 (ENSMOCG00000011242) #26	Gnpda1 (ENSMOCG00000004572) #28	Rnf14 (ENSMOCG00000003358) #29	Pcdh12 (ENSMOCG00000016834) #30	Dele1 (ENSMOCG00000018753) #31	Pcdh1 (ENSMOCG00000010075) #32	Arap3 (ENSMOCG00000016602) #33	Fchsd1 (ENSMOCG00000019543) #34	ENSMOCG00000020427 #35	Hdac3 (ENSMOCG00000000336) #36	ENSMOCG00000002570 #37
Cricetinae	ANCESTRAL SPECIES	14	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000153773.a.a.b.e.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Chinese hamster chok1gshd	MODERN SPECIES	92	Stk32a (ENSCGRG00001006873)	Ppp2r2b (ENSCGRG00001020744)	ENSCGRG00001013474	Gpr151 (ENSCGRG00001003304) #7	Tcerg1 (ENSCGRG00001005553) #8	Pou4f3 (ENSCGRG00001020611) #9	Rbm27 (ENSCGRG00001018200) #10	Lars (ENSCGRG00001004647) #11	Plac8l1 (ENSCGRG00001020122) #12	Sh3rf2 (ENSCGRG00001015279) #13	Grxcr2 (ENSCGRG00001003107) #14	Prelid2 (ENSCGRG00001018946) #15	Kctd16 (ENSCGRG00001017823) #17	Yipf5 (ENSCGRG00001011656) #18	ENSCGRG00001000351	Nr3c1 (ENSCGRG00001023458) #22	ENSCGRG00001023620	Arhgap26 (ENSCGRG00001014813) #23	Fgf1 (ENSCGRG00001017683) #24	Spry4 (ENSCGRG00001006586) #25	Ndfip1 (ENSCGRG00001005355) #26	Gnpda1 (ENSCGRG00001022546) #28	Rnf14 (ENSCGRG00001021566) #29	Pcdh12 (ENSCGRG00001016477) #30	Dele1 (ENSCGRG00001001000) #31	ENSCGRG00001023147	Pcdh1 (ENSCGRG00001019962) #32	Arap3 (ENSCGRG00001020709) #33	Fchsd1 (ENSCGRG00001023716) #34	Rell2 (ENSCGRG00001020596) #35	Hdac3 (ENSCGRG00001010047) #36
Golden Hamster	MODERN SPECIES	634	Ppp2r2b (ENSMAUG00000000540)	Gpr151 (ENSMAUG00000017885) #7	Tcerg1 (ENSMAUG00000001246) #8	Pou4f3 (ENSMAUG00000004271) #9	Rbm27 (ENSMAUG00000007657) #10	Lars (ENSMAUG00000003063) #11	Plac8l1 (ENSMAUG00000012870) #12	Sh3rf2 (ENSMAUG00000010120) #13	Grxcr2 (ENSMAUG00000011001) #14	Prelid2 (ENSMAUG00000012304) #15	ENSMAUG00000012663	ENSMAUG00000013226	Kctd16 (ENSMAUG00000013733) #17	Yipf5 (ENSMAUG00000017919) #18	Pabpc2 (ENSMAUG00000017991)	ENSMAUG00000020019 #22	Arhgap26 (ENSMAUG00000003540) #23	Fgf1 (ENSMAUG00000011876) #24	Spry4 (ENSMAUG00000013467) #25	Ndfip1 (ENSMAUG00000013654) #26	Gnpda1 (ENSMAUG00000013980) #28	Rnf14 (ENSMAUG00000014979) #29	Pcdh12 (ENSMAUG00000016530) #30	Dele1 (ENSMAUG00000016596) #31	Pcdh1 (ENSMAUG00000019390) #32	Arap3 (ENSMAUG00000001406) #33	Fchsd1 (ENSMAUG00000004330) #34	Rell2 (ENSMAUG00000004682) #35	Hdac3 (ENSMAUG00000011562) #36	ENSMAUG00000013628 #37	Pcdhgc5 (ENSMAUG00000019330)
Murinae	ANCESTRAL SPECIES	17	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000153773.a.a.b.e.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Mus	ANCESTRAL SPECIES	19	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000153773.a.a.b.e.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Mus_A	ANCESTRAL SPECIES	19	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00860000136040	ENSGT00940000153168.C.a.a #18	ENSGT00940000153773.a.a.b.e.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Mus_B	ANCESTRAL SPECIES	19	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163.k #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00860000136040	ENSGT00940000153168.C.a.a #18	ENSGT00940000153773.a.a.b.e.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Mus_C	ANCESTRAL SPECIES	16	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163.k #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00860000136040	ENSGT00940000153168.C.a.a #18	ENSGT00940000153773.a.a.b.e.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Steppe mouse	MODERN SPECIES	3052												ENSMSIG00000012267	Kctd16 (ENSMSIG00000012279) #17	Yipf5 (ENSMSIG00000012315) #18	Pabpc2 (ENSMSIG00000012335)	Nr3c1 (ENSMSIG00000012342) #22	Arhgap26 (ENSMSIG00000012400) #23	ENSMSIG00000012605	ENSMSIG00000012616
spretus	MODERN SPECIES	9	Ppp2r2b (MGP_SPRETEiJ_G0023140)	Gpr151 (MGP_SPRETEiJ_G0023139) #7	Tcerg1 (MGP_SPRETEiJ_G0023138) #8	Pou4f3 (MGP_SPRETEiJ_G0023137) #9	Rbm27 (MGP_SPRETEiJ_G0023136) #10	Lars (MGP_SPRETEiJ_G0023135) #11	Plac8l1 (MGP_SPRETEiJ_G0023134) #12	MGP_SPRETEiJ_G0023133	Sh3rf2 (MGP_SPRETEiJ_G0023132) #13	Grxcr2 (MGP_SPRETEiJ_G0023131) #14	Prelid2 (MGP_SPRETEiJ_G0023130) #15	Kctd16 (MGP_SPRETEiJ_G0023129) #17	MGP_SPRETEiJ_G0023128	Yipf5 (MGP_SPRETEiJ_G0023127) #18	Pabpc2 (MGP_SPRETEiJ_G0023126)	Nr3c1 (MGP_SPRETEiJ_G0023125) #22	Fgf1 (MGP_SPRETEiJ_G0023124) #24	Arhgap26 (MGP_SPRETEiJ_G0023123) #23	Spry4 (MGP_SPRETEiJ_G0023122) #25	Ndfip1 (MGP_SPRETEiJ_G0023121) #26	Gnpda1 (MGP_SPRETEiJ_G0023120) #28	Rnf14 (MGP_SPRETEiJ_G0023119) #29	Pcdh12 (MGP_SPRETEiJ_G0023118) #30	Dele1 (MGP_SPRETEiJ_G0023117) #31	Pcdh1 (MGP_SPRETEiJ_G0023116) #32	Arap3 (MGP_SPRETEiJ_G0023115) #33	Fchsd1 (MGP_SPRETEiJ_G0023114) #34	Rell2 (MGP_SPRETEiJ_G0023113) #35	Hdac3 (MGP_SPRETEiJ_G0023112) #36	Diaph1 (MGP_SPRETEiJ_G0023111) #37	Pcdhgc5 (MGP_SPRETEiJ_G0023110)
Mouse	MODERN SPECIES	9	Dpysl3 (ENSMUSG00000024501)	Stk32a (ENSMUSG00000039954)	Ppp2r2b (ENSMUSG00000024500)	Gpr151 (ENSMUSG00000042816) #7	Tcerg1 (ENSMUSG00000024498) #8	Pou4f3 (ENSMUSG00000024497) #9	Rbm27 (ENSMUSG00000024491) #10	Lars (ENSMUSG00000024493) #11	Plac8l1 (ENSMUSG00000059455) #12	Sh3rf2 (ENSMUSG00000057719) #13	Grxcr2 (ENSMUSG00000073574) #14	Prelid2 (ENSMUSG00000056671) #15	Kctd16 (ENSMUSG00000051401) #17	Yipf5 (ENSMUSG00000024487) #18	Pabpc2 (ENSMUSG00000051732)	Nr3c1 (ENSMUSG00000024431) #22	Arhgap26 (ENSMUSG00000036452) #23	Fgf1 (ENSMUSG00000036585) #24	Spry4 (ENSMUSG00000024427) #25	Ndfip1 (ENSMUSG00000024425) #26	Gnpda1 (ENSMUSG00000052102) #28	Rnf14 (ENSMUSG00000060450) #29	Pcdh12 (ENSMUSG00000024440) #30	Dele1 (ENSMUSG00000024442) #31	Pcdh1 (ENSMUSG00000051375) #32	Arap3 (ENSMUSG00000024451) #33	Fchsd1 (ENSMUSG00000038524) #34	Rell2 (ENSMUSG00000044024) #35	Hdac3 (ENSMUSG00000024454) #36	Diaph1 (ENSMUSG00000024456) #37	Pcdhgc5 (ENSMUSG00000102543)
Ryukyu mouse	MODERN SPECIES	9	Stk32a (MGP_CAROLIEiJ_G0022231)	Ppp2r2b (MGP_CAROLIEiJ_G0022230)	Gpr151 (MGP_CAROLIEiJ_G0022229) #7	Tcerg1 (MGP_CAROLIEiJ_G0022228) #8	Pou4f3 (MGP_CAROLIEiJ_G0022227) #9	Rbm27 (MGP_CAROLIEiJ_G0022226) #10	Lars (MGP_CAROLIEiJ_G0022225) #11	Plac8l1 (MGP_CAROLIEiJ_G0022224) #12	Sh3rf2 (MGP_CAROLIEiJ_G0022223) #13	Grxcr2 (MGP_CAROLIEiJ_G0022222) #14	Prelid2 (MGP_CAROLIEiJ_G0022221) #15	Kctd16 (MGP_CAROLIEiJ_G0022220) #17	MGP_CAROLIEiJ_G0022219	Yipf5 (MGP_CAROLIEiJ_G0022218) #18	Pabpc2 (MGP_CAROLIEiJ_G0022217)	Nr3c1 (MGP_CAROLIEiJ_G0022216) #22	Fgf1 (MGP_CAROLIEiJ_G0022215) #24	Arhgap26 (MGP_CAROLIEiJ_G0022214) #23	Spry4 (MGP_CAROLIEiJ_G0022213) #25	Ndfip1 (MGP_CAROLIEiJ_G0022212) #26	Gnpda1 (MGP_CAROLIEiJ_G0022211) #28	Rnf14 (MGP_CAROLIEiJ_G0022210) #29	Pcdh12 (MGP_CAROLIEiJ_G0022209) #30	Dele1 (MGP_CAROLIEiJ_G0022208) #31	Pcdh1 (MGP_CAROLIEiJ_G0022207) #32	Arap3 (MGP_CAROLIEiJ_G0022206) #33	Fchsd1 (MGP_CAROLIEiJ_G0022205) #34	Rell2 (MGP_CAROLIEiJ_G0022204) #35	Hdac3 (MGP_CAROLIEiJ_G0022203) #36	Diaph1 (MGP_CAROLIEiJ_G0022202) #37	Pcdhgc5 (MGP_CAROLIEiJ_G0022201)
Shrew mouse	MODERN SPECIES	6	Stk32a (MGP_PahariEiJ_G0018964)	Ppp2r2b (MGP_PahariEiJ_G0018963)	Gpr151 (MGP_PahariEiJ_G0018962) #7	Tcerg1 (MGP_PahariEiJ_G0018961) #8	Pou4f3 (MGP_PahariEiJ_G0018960) #9	Rbm27 (MGP_PahariEiJ_G0018959) #10	Lars (MGP_PahariEiJ_G0018958) #11	Plac8l1 (MGP_PahariEiJ_G0018957) #12	Sh3rf2 (MGP_PahariEiJ_G0018956) #13	Grxcr2 (MGP_PahariEiJ_G0018955) #14	Prelid2 (MGP_PahariEiJ_G0018954) #15	Kctd16 (MGP_PahariEiJ_G0018953) #17	MGP_PahariEiJ_G0018952	Yipf5 (MGP_PahariEiJ_G0018951) #18	Pabpc2 (MGP_PahariEiJ_G0018950)	Nr3c1 (MGP_PahariEiJ_G0018949) #22	Fgf1 (MGP_PahariEiJ_G0018948) #24	Arhgap26 (MGP_PahariEiJ_G0018947) #23	Spry4 (MGP_PahariEiJ_G0018946) #25	Ndfip1 (MGP_PahariEiJ_G0018945) #26	Gnpda1 (MGP_PahariEiJ_G0018944) #28	Rnf14 (MGP_PahariEiJ_G0018943) #29	Pcdh12 (MGP_PahariEiJ_G0018942) #30	Dele1 (MGP_PahariEiJ_G0018941) #31	Pcdh1 (MGP_PahariEiJ_G0018940) #32	Arap3 (MGP_PahariEiJ_G0018939) #33	Fchsd1 (MGP_PahariEiJ_G0018938) #34	Rell2 (MGP_PahariEiJ_G0018937) #35	Hdac3 (MGP_PahariEiJ_G0018936) #36	Diaph1 (MGP_PahariEiJ_G0018935) #37	Pcdhgc5 (MGP_PahariEiJ_G0018934)
Rat	MODERN SPECIES	9	Stk32a (ENSRNOG00000027066)	Ppp2r2b (ENSRNOG00000018851)	Gpr151 (ENSRNOG00000027103) #7	Tcerg1 (ENSRNOG00000018849) #8	Pou4f3 (ENSRNOG00000018842) #9	Rbm27 (ENSRNOG00000027250) #10	Lars1 (ENSRNOG00000018304) #11	Plac8l1 (ENSRNOG00000018820) #12	Sh3rf2 (ENSRNOG00000018780) #13	Grxcr2 (ENSRNOG00000039325) #14	Prelid2 (ENSRNOG00000067168) #15	ENSRNOG00000066807	Kctd16 (ENSRNOG00000069221) #17	Yipf5 (ENSRNOG00000014564) #18	Pabpc2 (ENSRNOG00000014527)	Nr3c1 (ENSRNOG00000014096) #22	Arhgap26 (ENSRNOG00000013920) #23	Fgf1 (ENSRNOG00000013867) #24	Spry4 (ENSRNOG00000013851) #25	Ndfip1 (ENSRNOG00000013562) #26	Gnpda1 (ENSRNOG00000047213) #28	Rnf14 (ENSRNOG00000045637) #29	Pcdh12 (ENSRNOG00000019265) #30	Dele1 (ENSRNOG00000019276) #31	Pcdh1 (ENSRNOG00000060410) #32	Arap3 (ENSRNOG00000055527) #33	Fchsd1 (ENSRNOG00000039415) #34	Rell2 (ENSRNOG00000019575) #35	Hdac3 (ENSRNOG00000019618)	Diaph1 (ENSRNOG00000019688) #37	Pcdhga5 (ENSRNOG00000063070)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1282												Kctd16 (ENSNGAG00000020388) #17	Yipf5 (ENSNGAG00000000808) #18	Pabpc2 (ENSNGAG00000016040)	ENSNGAG00000013184	ENSNGAG00000014086 #22	Arhgap26 (ENSNGAG00000018795) #23	ENSNGAG00000011217
Lesser Egyptian jerboa	MODERN SPECIES	113	ENSJJAG00000002386	Rbm27 (ENSJJAG00000010911) #10	Lars (ENSJJAG00000015265) #11	ENSJJAG00000002768	Plac8l1 (ENSJJAG00000023442) #12	Sh3rf2 (ENSJJAG00000018919) #13	ENSJJAG00000019736	Grxcr2 (ENSJJAG00000018009) #14	ENSJJAG00000016937	Prelid2 (ENSJJAG00000013584) #15	Kctd16 (ENSJJAG00000010803) #17	ENSJJAG00000004118	Yipf5 (ENSJJAG00000003990) #18	Pabpc2 (ENSJJAG00000014258)	ENSJJAG00000023594	ENSJJAG00000023857 #22	Arhgap26 (ENSJJAG00000017919) #23	Fgf1 (ENSJJAG00000015769) #24	Spry4 (ENSJJAG00000002860) #25	Ndfip1 (ENSJJAG00000022196) #26	Gnpda1 (ENSJJAG00000021890) #28	ENSJJAG00000018117 #29	Pcdh12 (ENSJJAG00000017286) #30	Dele1 (ENSJJAG00000014978) #31	Pcdh1 (ENSJJAG00000012873) #32	Arap3 (ENSJJAG00000013482) #33	ENSJJAG00000008926 #34	ENSJJAG00000000378 #35	Hdac3 (ENSJJAG00000000176) #36	ENSJJAG00000015427 #37	Pcdhgc4 (ENSJJAG00000015107)
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000163745
Sciuridae	ANCESTRAL SPECIES	18	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000163745
Marmotini	ANCESTRAL SPECIES	23	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000006350.m.a.c.b.a.b.d	ENSGT00390000012721.a.w #26	ENSGT00390000014316.c.b.z #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Marmotini_b	ANCESTRAL SPECIES	16	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000006350.m.a.c.b.a.b.d	ENSGT00390000012721.a.w #26	ENSGT00390000014316.c.b.z #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Arctic ground squirrel	MODERN SPECIES	29	ENSUPAG00010012790	ENSUPAG00010012787	GPR151 (ENSUPAG00010012784) #7	TCERG1 (ENSUPAG00010012722) #8	POU4F3 (ENSUPAG00010012716) #9	RBM27 (ENSUPAG00010012601) #10	LARS1 (ENSUPAG00010012568) #11	ENSUPAG00010012555	PLAC8L1 (ENSUPAG00010012550) #12	SH3RF2 (ENSUPAG00010012520) #13	GRXCR2 (ENSUPAG00010012512) #14	PRELID2 (ENSUPAG00010012501) #15	KCTD16 (ENSUPAG00010012480) #17	YIPF5 (ENSUPAG00010012467) #18	ENSUPAG00010012461	NR3C1 (ENSUPAG00010012427) #22	ARHGAP26 (ENSUPAG00010012389) #23	FGF1 (ENSUPAG00010012366) #24	SPRY4 (ENSUPAG00010012357) #25	ENSUPAG00010012352	NDFIP1 (ENSUPAG00010012343) #26	ENSUPAG00010012327 #28	RNF14 (ENSUPAG00010012274) #29	PCDH12 (ENSUPAG00010012266) #30	DELE1 (ENSUPAG00010012242) #31	PCDH1 (ENSUPAG00010012232) #32	ARAP3 (ENSUPAG00010012158) #33	FCHSD1 (ENSUPAG00010012138) #34	RELL2 (ENSUPAG00010012113) #35	HDAC3 (ENSUPAG00010012085) #36	DIAPH1 (ENSUPAG00010008219) #37
Squirrel	MODERN SPECIES	104	DPYSL3 (ENSSTOG00000006307)	STK32A (ENSSTOG00000006290)	ENSSTOG00000031912	PPP2R2B (ENSSTOG00000024142)	GPR151 (ENSSTOG00000006259) #7	TCERG1 (ENSSTOG00000024158) #8	POU4F3 (ENSSTOG00000021302) #9	RBM27 (ENSSTOG00000002378) #10	LARS1 (ENSSTOG00000002356) #11	PLAC8L1 (ENSSTOG00000002447) #12	SH3RF2 (ENSSTOG00000002435) #13	GRXCR2 (ENSSTOG00000002429) #14	PRELID2 (ENSSTOG00000002416) #15	KCTD16 (ENSSTOG00000007741) #17	YIPF5 (ENSSTOG00000023465) #18	NR3C1 (ENSSTOG00000016527) #22	ARHGAP26 (ENSSTOG00000016522) #23	FGF1 (ENSSTOG00000027551) #24	SPRY4 (ENSSTOG00000005175) #25	ENSSTOG00000005153 #26	ENSSTOG00000016508 #28	RNF14 (ENSSTOG00000016506) #29	PCDH12 (ENSSTOG00000019558) #30	DELE1 (ENSSTOG00000001010) #31	PCDH1 (ENSSTOG00000020392) #32	ARAP3 (ENSSTOG00000021570) #33	FCHSD1 (ENSSTOG00000016246) #34	RELL2 (ENSSTOG00000016242) #35	HDAC3 (ENSSTOG00000016240) #36	DIAPH1 (ENSSTOG00000021517) #37	PCDHGC4 (ENSSTOG00000019457)
Alpin marmot	MODERN SPECIES		ENSMMMG00000018650	STK32A (ENSMMMG00000018625)	ENSMMMG00000018623	PPP2R2B (ENSMMMG00000018550)	GPR151 (ENSMMMG00000018482) #7	TCERG1 (ENSMMMG00000018467) #8	POU4F3 (ENSMMMG00000018463) #9	RBM27 (ENSMMMG00000018396) #10	LARS1 (ENSMMMG00000018343) #11	PLAC8L1 (ENSMMMG00000018328) #12	SH3RF2 (ENSMMMG00000018315) #13	GRXCR2 (ENSMMMG00000018280) #14	PRELID2 (ENSMMMG00000018271) #15	KCTD16 (ENSMMMG00000018206) #17	YIPF5 (ENSMMMG00000018156) #18	NR3C1 (ENSMMMG00000018086) #22	ARHGAP26 (ENSMMMG00000018025) #23	FGF1 (ENSMMMG00000017970) #24	SPRY4 (ENSMMMG00000017922) #25	ENSMMMG00000017919	NDFIP1 (ENSMMMG00000017910) #26	GNPDA1 (ENSMMMG00000017886) #28	RNF14 (ENSMMMG00000017879) #29	PCDH12 (ENSMMMG00000017873) #30	DELE1 (ENSMMMG00000017857) #31	PCDH1 (ENSMMMG00000017847) #32	ARAP3 (ENSMMMG00000017803) #33	FCHSD1 (ENSMMMG00000017794) #34	RELL2 (ENSMMMG00000017758) #35	HDAC3 (ENSMMMG00000017747) #36	ENSMMMG00000011776
Eurasian red squirrel	MODERN SPECIES	15	DPYSL3 (ENSSVLG00005012226)	STK32A (ENSSVLG00005012322)	PPP2R2B (ENSSVLG00005012651)	GPR151 (ENSSVLG00005013020) #7	TCERG1 (ENSSVLG00005013340) #8	POU4F3 (ENSSVLG00005013484) #9	RBM27 (ENSSVLG00005013583) #10	LARS1 (ENSSVLG00005013721) #11	PLAC8L1 (ENSSVLG00005013826) #12	SH3RF2 (ENSSVLG00005013856) #13	GRXCR2 (ENSSVLG00005013907) #14	PRELID2 (ENSSVLG00005013978) #15	KCTD16 (ENSSVLG00005014093) #17	YIPF5 (ENSSVLG00005014133) #18	ENSSVLG00005014244	NR3C1 (ENSSVLG00005014315) #22	ARHGAP26 (ENSSVLG00005014462) #23	FGF1 (ENSSVLG00005014706) #24	ENSSVLG00005014780 #25	NDFIP1 (ENSSVLG00005014802) #26	ENSSVLG00005014842	GNPDA1 (ENSSVLG00005014862) #28	RNF14 (ENSSVLG00005014906) #29	PCDH12 (ENSSVLG00005015023) #30	DELE1 (ENSSVLG00005015099) #31	PCDH1 (ENSSVLG00005015152) #32	ARAP3 (ENSSVLG00005015301) #33	FCHSD1 (ENSSVLG00005016278) #34	RELL2 (ENSSVLG00005016319) #35	HDAC3 (ENSSVLG00005016412) #36	DIAPH1 (ENSSVLG00005016486) #37
Hystricomorpha	ANCESTRAL SPECIES	27	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Hystricomorpha_a	ANCESTRAL SPECIES	24	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Hystricomorpha_b	ANCESTRAL SPECIES	57	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Long-tailed chinchilla	MODERN SPECIES	122	GPR151 (ENSCLAG00000015992) #7	TCERG1 (ENSCLAG00000015689) #8	POU4F3 (ENSCLAG00000011451) #9	ENSCLAG00000011866	RBM27 (ENSCLAG00000016106) #10	LARS1 (ENSCLAG00000011193) #11	ENSCLAG00000011566	PLAC8L1 (ENSCLAG00000016637) #12	SH3RF2 (ENSCLAG00000014809) #13	ENSCLAG00000014607	GRXCR2 (ENSCLAG00000014652) #14	PRELID2 (ENSCLAG00000016109) #15	KCTD16 (ENSCLAG00000011042) #17	YIPF5 (ENSCLAG00000011264) #18	ENSCLAG00000011558	NR3C1 (ENSCLAG00000009640) #22	ARHGAP26 (ENSCLAG00000012088) #23	FGF1 (ENSCLAG00000009907) #24	NDFIP1 (ENSCLAG00000016618) #26	GNPDA1 (ENSCLAG00000013704) #28	RNF14 (ENSCLAG00000014054) #29	ENSCLAG00000013861	DELE1 (ENSCLAG00000017360) #31	PCDH1 (ENSCLAG00000016393) #32	ARAP3 (ENSCLAG00000012705) #33	FCHSD1 (ENSCLAG00000011207) #34	RELL2 (ENSCLAG00000011716) #35	HDAC3 (ENSCLAG00000014357) #36	DIAPH1 (ENSCLAG00000015293) #37	PCDHGC3 (ENSCLAG00000011461)	PCDHGB2 (ENSCLAG00000012061)
Degu	MODERN SPECIES	226														KCTD16 (ENSODEG00000011222) #17	YIPF5 (ENSODEG00000011644) #18	ENSODEG00000011051 #22	ARHGAP26 (ENSODEG00000012456) #23	FGF1 (ENSODEG00000010661) #24	SPRY4 (ENSODEG00000010979) #25	ENSODEG00000019847	NDFIP1 (ENSODEG00000012497) #26	GNPDA1 (ENSODEG00000010602) #28	ENSODEG00000010454 #29	PCDH12 (ENSODEG00000010851) #30	DELE1 (ENSODEG00000010984) #31	PCDH1 (ENSODEG00000013806) #32	ENSODEG00000011015	ARAP3 (ENSODEG00000015338) #33	FCHSD1 (ENSODEG00000011662) #34	RELL2 (ENSODEG00000010688) #35	HDAC3 (ENSODEG00000013234) #36
Guinea pig	MODERN SPECIES	6	JAKMIP2 (ENSCPOG00000001839)	DPYSL3 (ENSCPOG00000007983)	STK32A (ENSCPOG00000007977)	PPP2R2B (ENSCPOG00000003335)	GPR151 (ENSCPOG00000003044) #7	TCERG1 (ENSCPOG00000003041) #8	POU4F3 (ENSCPOG00000025610) #9	RBM27 (ENSCPOG00000002498) #10	LARS1 (ENSCPOG00000012329) #11	PLAC8L1 (ENSCPOG00000012172) #12	SH3RF2 (ENSCPOG00000012171) #13	GRXCR2 (ENSCPOG00000003348) #14	PRELID2 (ENSCPOG00000036397) #15	KCTD16 (ENSCPOG00000009247) #17	YIPF5 (ENSCPOG00000030944) #18	NR3C1 (ENSCPOG00000005188) #22	ARHGAP26 (ENSCPOG00000008244) #23	FGF1 (ENSCPOG00000034859) #24	SPRY4 (ENSCPOG00000039083) #25	NDFIP1 (ENSCPOG00000009399) #26	GNPDA1 (ENSCPOG00000002726) #28	RNF14 (ENSCPOG00000002723) #29	PCDH12 (ENSCPOG00000005759) #30	DELE1 (ENSCPOG00000005755) #31	PCDH1 (ENSCPOG00000005750) #32	ARAP3 (ENSCPOG00000012363) #33	FCHSD1 (ENSCPOG00000020773) #34	RELL2 (ENSCPOG00000014276) #35	HDAC3 (ENSCPOG00000014275) #36	DIAPH1 (ENSCPOG00000019643) #37	PCDHGA6 (ENSCPOG00000030704)
Naked mole-rat female	MODERN SPECIES	25	ENSHGLG00000045331	ENSHGLG00000003473	LARS1 (ENSHGLG00000006937) #11	PLAC8L1 (ENSHGLG00000006179) #12	Sh3rf2 (ENSHGLG00000004265) #13	GRXCR2 (ENSHGLG00000005488) #14	PRELID2 (ENSHGLG00000041523) #15	ENSHGLG00000048782	ENSHGLG00000033590	ENSHGLG00000035164	ENSHGLG00000034660	ENSHGLG00000042921	ENSHGLG00000006088 #17	ENSHGLG00000042339	YIPF5 (ENSHGLG00000042369) #18	ENSHGLG00000004110 #22	ENSHGLG00000005132 #23	ENSHGLG00000047598	ENSHGLG00000035295	ENSHGLG00000034200	ENSHGLG00000032544	FGF1 (ENSHGLG00000037888) #24	ENSHGLG00000007801 #25	ENSHGLG00000007479	NDFIP1 (ENSHGLG00000006077) #26	GNPDA1 (ENSHGLG00000005017) #28	RNF14 (ENSHGLG00000004111) #29	PCDH12 (ENSHGLG00000003799) #30	DELE1 (ENSHGLG00000010824) #31	PCDH1 (ENSHGLG00000009729) #32	ARAP3 (ENSHGLG00000006972) #33
Lagomorpha	ANCESTRAL SPECIES	3	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Rabbit	MODERN SPECIES	14	PPP2R2B (ENSOCUG00000006861)	ENSOCUG00000021792	GPR151 (ENSOCUG00000006177) #7	TCERG1 (ENSOCUG00000006169) #8	ENSOCUG00000022425 #9	RBM27 (ENSOCUG00000000186) #10	ENSOCUG00000033519	LARS1 (ENSOCUG00000015684) #11	PLAC8L1 (ENSOCUG00000015677) #12	SH3RF2 (ENSOCUG00000015667) #13	GRXCR2 (ENSOCUG00000015661) #14	ENSOCUG00000029156 #15	ENSOCUG00000023960	KCTD16 (ENSOCUG00000011159) #17	YIPF5 (ENSOCUG00000028126) #18	NR3C1 (ENSOCUG00000011676) #22	ARHGAP26 (ENSOCUG00000011665) #23	ENSOCUG00000021770	FGF1 (ENSOCUG00000013987) #24	SPRY4 (ENSOCUG00000003215) #25	NDFIP1 (ENSOCUG00000023595) #26	GNPDA1 (ENSOCUG00000016963) #28	RNF14 (ENSOCUG00000016953) #29	PCDH12 (ENSOCUG00000016941) #30	DELE1 (ENSOCUG00000016933) #31	PCDH1 (ENSOCUG00000016923) #32	ARAP3 (ENSOCUG00000009340) #33	FCHSD1 (ENSOCUG00000002098) #34	RELL2 (ENSOCUG00000025508) #35	HDAC3 (ENSOCUG00000008961) #36	ENSOCUG00000030011
Pika	MODERN SPECIES	1954																ENSOPRG00000015535 #22	ARHGAP26 (ENSOPRG00000015495) #23
Tree shrew	MODERN SPECIES	2264																NR3C1 (ENSTBEG00000016278) #22	ARHGAP26 (ENSTBEG00000015903) #23
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT01050000246758	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT01050000246758	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Suina	ANCESTRAL SPECIES	11	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000163745
Chacoan peccary	MODERN SPECIES	912	JAKMIP2 (ENSCWAG00000014032)	DPYSL3 (ENSCWAG00000013893)	STK32A (ENSCWAG00000013791)	PPP2R2B (ENSCWAG00000013282)	GPR151 (ENSCWAG00000013225) #7	TCERG1 (ENSCWAG00000013060) #8	POU4F3 (ENSCWAG00000013008) #9	RBM27 (ENSCWAG00000012931) #10	LARS1 (ENSCWAG00000012774) #11	PLAC8L1 (ENSCWAG00000012716) #12	SH3RF2 (ENSCWAG00000012617) #13	GRXCR2 (ENSCWAG00000012555) #14	PRELID2 (ENSCWAG00000012498) #15	KCTD16 (ENSCWAG00000012472) #17	YIPF5 (ENSCWAG00000012427) #18	NR3C1 (ENSCWAG00000012233) #22	ARHGAP26 (ENSCWAG00000011556) #23	ENSCWAG00000011494 #24	SPRY4 (ENSCWAG00000011439) #25	NDFIP1 (ENSCWAG00000011396) #26	GNPDA1 (ENSCWAG00000011351) #28	RNF14 (ENSCWAG00000011240) #29	PCDH12 (ENSCWAG00000011178) #30	DELE1 (ENSCWAG00000011103) #31	PCDH1 (ENSCWAG00000011035) #32
Pig	MODERN SPECIES	10	PPP2R2B (ENSSSCG00000028976)	GPR151 (ENSSSCG00000014415) #7	TCERG1 (ENSSSCG00000014416) #8	POU4F3 (ENSSSCG00000014412) #9	RBM27 (ENSSSCG00000014414) #10	LARS1 (ENSSSCG00000014411) #11	PLAC8L1 (ENSSSCG00000014408) #12	SH3RF2 (ENSSSCG00000014410) #13	GRXCR2 (ENSSSCG00000040306) #14	ENSSSCG00000041978	PRELID2 (ENSSSCG00000014406) #15	ENSSSCG00000056548	ENSSSCG00000043236	KCTD16 (ENSSSCG00000032826) #17	YIPF5 (ENSSSCG00000039309) #18	NR3C1 (ENSSSCG00000014401) #22	ENSSSCG00000056350	ARHGAP26 (ENSSSCG00000014399) #23	FGF1 (ENSSSCG00000024954) #24	SPRY4 (ENSSSCG00000036322) #25	NDFIP1 (ENSSSCG00000025295) #26	GNPDA1 (ENSSSCG00000038940) #28	RNF14 (ENSSSCG00000014394) #29	PCDH12 (ENSSSCG00000014395) #30	DELE1 (ENSSSCG00000014396) #31	PCDH1 (ENSSSCG00000022289) #32	ARAP3 (ENSSSCG00000014391) #33	FCHSD1 (ENSSSCG00000014390) #34	RELL2 (ENSSSCG00000014389) #35	HDAC3 (ENSSSCG00000014388) #36	DIAPH1 (ENSSSCG00000014387) #37
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT01050000246758	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Camelidae	ANCESTRAL SPECIES	1	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00910000146907	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Arabian camel	MODERN SPECIES	22	DPYSL3 (ENSCDRG00005005767)	STK32A (ENSCDRG00005005822)	PPP2R2B (ENSCDRG00005005869)	GPR151 (ENSCDRG00005006206) #7	TCERG1 (ENSCDRG00005006238) #8	POU4F3 (ENSCDRG00005006464) #9	RBM27 (ENSCDRG00005006505) #10	LARS1 (ENSCDRG00005006632) #11	PLAC8L1 (ENSCDRG00005006765) #12	SH3RF2 (ENSCDRG00005006810) #13	GRXCR2 (ENSCDRG00005006943) #14	PRELID2 (ENSCDRG00005007015) #15	ENSCDRG00005007104	KCTD16 (ENSCDRG00005007114) #17	YIPF5 (ENSCDRG00005007163) #18	NR3C1 (ENSCDRG00005007211) #22	ARHGAP26 (ENSCDRG00005007379) #23	FGF1 (ENSCDRG00005007630) #24	SPRY4 (ENSCDRG00005007704) #25	NDFIP1 (ENSCDRG00005007731) #26	GNPDA1 (ENSCDRG00005007768) #28	RNF14 (ENSCDRG00005007888) #29	PCDH12 (ENSCDRG00005007932) #30	DELE1 (ENSCDRG00005007964) #31	PCDH1 (ENSCDRG00005008093) #32	ARAP3 (ENSCDRG00005008232) #33	FCHSD1 (ENSCDRG00005008705) #34	RELL2 (ENSCDRG00005008821) #35	HDAC3 (ENSCDRG00005009144) #36	DIAPH1 (ENSCDRG00005009384) #37	ENSCDRG00005011028
Alpaca	MODERN SPECIES	3629															YIPF5 (ENSVPAG00000006597) #18	NR3C1 (ENSVPAG00000006590) #22
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT01050000246758	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Pecora	ANCESTRAL SPECIES		ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT01050000246758	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Percora_a	ANCESTRAL SPECIES		ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT01050000246758	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Bovidae	ANCESTRAL SPECIES		ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000015889.o.a	ENSGT00980000201221 #21	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Bovinae	ANCESTRAL SPECIES	2	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000015889.o.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00970000196845
Bos	ANCESTRAL SPECIES	3	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000015889.o.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Bos_b	ANCESTRAL SPECIES	2	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000015889.o.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00970000196845
Cow	MODERN SPECIES	26	DPYSL3 (ENSBTAG00000010661)	STK32A (ENSBTAG00000000626)	PPP2R2B (ENSBTAG00000001862)	GPR151 (ENSBTAG00000003260) #7	TCERG1 (ENSBTAG00000003259) #8	POU4F3 (ENSBTAG00000018817) #9	RBM27 (ENSBTAG00000011642) #10	LARS1 (ENSBTAG00000006765) #11	PLAC8L1 (ENSBTAG00000044067) #12	SH3RF2 (ENSBTAG00000006762) #13	GRXCR2 (ENSBTAG00000035966) #14	PRELID2 (ENSBTAG00000044169) #15	KCTD16 (ENSBTAG00000019012) #17	YIPF5 (ENSBTAG00000012758) #18	ENSBTAG00000053427	NR3C1 (ENSBTAG00000019472) #22	ARHGAP26 (ENSBTAG00000027151) #23	FGF1 (ENSBTAG00000005198) #24	SPRY4 (ENSBTAG00000008250) #25	NDFIP1 (ENSBTAG00000047747) #26	GNPDA1 (ENSBTAG00000007865) #28	RNF14 (ENSBTAG00000005249) #29	PCDH12 (ENSBTAG00000008437) #30	DELE1 (ENSBTAG00000008435) #31	PCDH1 (ENSBTAG00000012518) #32	ARAP3 (ENSBTAG00000015938) #33	FCHSD1 (ENSBTAG00000049248) #34	RELL2 (ENSBTAG00000017371) #35	HDAC3 (ENSBTAG00000017360) #36	ENSBTAG00000030499	PCDHGC4 (ENSBTAG00000054197)
Hybrid Bos Indicus	MODERN SPECIES	26	JAKMIP2 (ENSBIXG00005003009)	DPYSL3 (ENSBIXG00005018338)	STK32A (ENSBIXG00005002966)	PPP2R2B (ENSBIXG00005018253)	GPR151 (ENSBIXG00005002943) #7	TCERG1 (ENSBIXG00005018130) #8	POU4F3 (ENSBIXG00005017969) #9	RBM27 (ENSBIXG00005017931) #10	LARS1 (ENSBIXG00005017859) #11	PLAC8L1 (ENSBIXG00005017814) #12	SH3RF2 (ENSBIXG00005017791) #13	GRXCR2 (ENSBIXG00005017736) #14	PRELID2 (ENSBIXG00005017702) #15	KCTD16 (ENSBIXG00005017615) #17	YIPF5 (ENSBIXG00005017589) #18	NR3C1 (ENSBIXG00005017508) #22	ARHGAP26 (ENSBIXG00005017277) #23	ENSBIXG00005002750	ENSBIXG00005016954	FGF1 (ENSBIXG00005016877) #24	SPRY4 (ENSBIXG00005016759) #25	NDFIP1 (ENSBIXG00005016690) #26	ENSBIXG00005016650	GNPDA1 (ENSBIXG00005016638) #28	RNF14 (ENSBIXG00005006352) #29	PCDH12 (ENSBIXG00005016404) #30	DELE1 (ENSBIXG00005016389) #31	PCDH1 (ENSBIXG00005016354) #32	ARAP3 (ENSBIXG00005007324) #33	FCHSD1 (ENSBIXG00005016185) #34	RELL2 (ENSBIXG00005016160) #35
Bos_a	ANCESTRAL SPECIES	2	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Wild yak	MODERN SPECIES	1625																NR3C1 (ENSBMUG00000019299) #22	ENSBMUG00000019336 #21	ARHGAP26 (ENSBMUG00000019492) #23	FGF1 (ENSBMUG00000019611) #24	SPRY4 (ENSBMUG00000019647) #25
Domestic yak	MODERN SPECIES	27	DPYSL3 (ENSBGRG00000015158)	STK32A (ENSBGRG00000014894)	PPP2R2B (ENSBGRG00000014302)	GPR151 (ENSBGRG00000014223) #7	TCERG1 (ENSBGRG00000013462) #8	POU4F3 (ENSBGRG00000013372) #9	RBM27 (ENSBGRG00000013279) #10	LARS1 (ENSBGRG00000012859) #11	PLAC8L1 (ENSBGRG00000012789) #12	SH3RF2 (ENSBGRG00000012738) #13	GRXCR2 (ENSBGRG00000012670) #14	PRELID2 (ENSBGRG00000012553) #15	ENSBGRG00000012487 #17	KCTD16 (ENSBGRG00000012438) #17	YIPF5 (ENSBGRG00000012348) #18	NR3C1 (ENSBGRG00000012083) #22	ARHGAP26 (ENSBGRG00000011144) #23	ENSBGRG00000010951 #24	SPRY4 (ENSBGRG00000010882) #25	NDFIP1 (ENSBGRG00000010631) #26	GNPDA1 (ENSBGRG00000010554) #28	RNF14 (ENSBGRG00000025698) #29	PCDH12 (ENSBGRG00000025686) #30	DELE1 (ENSBGRG00000025636) #31	PCDH1 (ENSBGRG00000025618) #32	ARAP3 (ENSBGRG00000025428) #33	FCHSD1 (ENSBGRG00000025323) #34	RELL2 (ENSBGRG00000025289) #35	HDAC3 (ENSBGRG00000025241) #36	ENSBGRG00000025196 #37	ENSBGRG00000025182
American bison	MODERN SPECIES	3206	DPYSL3 (ENSBBBG00000010141)	STK32A (ENSBBBG00000010158)	PPP2R2B (ENSBBBG00000001726)	GPR151 (ENSBBBG00000001729) #7	TCERG1 (ENSBBBG00000010226) #8	POU4F3 (ENSBBBG00000010233) #9	RBM27 (ENSBBBG00000010244) #10	LARS1 (ENSBBBG00000000111) #11	PLAC8L1 (ENSBBBG00000000097) #12	SH3RF2 (ENSBBBG00000000078) #13	GRXCR2 (ENSBBBG00000000069) #14	PRELID2 (ENSBBBG00000000057) #15	KCTD16 (ENSBBBG00000000047) #17	YIPF5 (ENSBBBG00000010257) #18	ENSBBBG00000010259	NR3C1 (ENSBBBG00000010266) #22	ARHGAP26 (ENSBBBG00000010307) #23	ENSBBBG00000010338 #24	SPRY4 (ENSBBBG00000010347) #25	NDFIP1 (ENSBBBG00000001802) #26	GNPDA1 (ENSBBBG00000010370) #28	RNF14 (ENSBBBG00000010396) #29	PCDH12 (ENSBBBG00000010402) #30	DELE1 (ENSBBBG00000010411) #31	PCDH1 (ENSBBBG00000010418) #32	ARAP3 (ENSBBBG00000010532) #33	FCHSD1 (ENSBBBG00000010579) #34	RELL2 (ENSBBBG00000010596) #35	HDAC3 (ENSBBBG00000010603) #36	DIAPH1 (ENSBBBG00000010855) #37	PCDHGC5 (ENSBBBG00000010882)
Caprinae	ANCESTRAL SPECIES	3	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000015889.o.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Goat	MODERN SPECIES	26	STK32A (ENSCHIG00000013513)	ENSCHIG00000018711	PPP2R2B (ENSCHIG00000014943)	GPR151 (ENSCHIG00000011260) #7	TCERG1 (ENSCHIG00000010905) #8	POU4F3 (ENSCHIG00000018754) #9	RBM27 (ENSCHIG00000009045) #10	LARS1 (ENSCHIG00000014949) #11	PLAC8L1 (ENSCHIG00000012035) #12	SH3RF2 (ENSCHIG00000014437) #13	GRXCR2 (ENSCHIG00000001744) #14	PRELID2 (ENSCHIG00000026758) #15	KCTD16 (ENSCHIG00000003718) #17	ENSCHIG00000019032 #18	ENSCHIG00000018962	NR3C1 (ENSCHIG00000016782) #22	ENSCHIG00000011003 #23	ENSCHIG00000024786	FGF1 (ENSCHIG00000026836) #24	SPRY4 (ENSCHIG00000004220) #25	NDFIP1 (ENSCHIG00000025513) #26	ENSCHIG00000015196 #28	ENSCHIG00000011504 #29	PCDH12 (ENSCHIG00000024645) #30	DELE1 (ENSCHIG00000013236) #31	PCDH1 (ENSCHIG00000013193) #32	ARAP3 (ENSCHIG00000009541) #33	FCHSD1 (ENSCHIG00000020273) #34	RELL2 (ENSCHIG00000026988) #35	HDAC3 (ENSCHIG00000023640) #36	DIAPH1 (ENSCHIG00000025262) #37
Rambouillet Sheep	MODERN SPECIES	21	ENSOARG00020022156	PPP2R2B (ENSOARG00020021670)	GPR151 (ENSOARG00020021621) #7	ENSOARG00020021186 #8	POU4F3 (ENSOARG00020021135) #9	RBM27 (ENSOARG00020020611) #10	ENSOARG00020020500 #11	PLAC8L1 (ENSOARG00020020461) #12	SH3RF2 (ENSOARG00020020399) #13	GRXCR2 (ENSOARG00020020373) #14	PRELID2 (ENSOARG00020020309) #15	ENSOARG00020020289	KCTD16 (ENSOARG00020020241) #17	YIPF5 (ENSOARG00020020202) #18	ENSOARG00020020171 #21	NR3C1 (ENSOARG00020019996) #22	ARHGAP26 (ENSOARG00020019500) #23	ENSOARG00020019371 #24	SPRY4 (ENSOARG00020019332) #25	NDFIP1 (ENSOARG00020019295) #26	GNPDA1 (ENSOARG00020019253) #28	RNF14 (ENSOARG00020019149) #29	PCDH12 (ENSOARG00020019089) #30	DELE1 (ENSOARG00020018970) #31	PCDH1 (ENSOARG00020018848) #32	ARAP3 (ENSOARG00020018082) #33	FCHSD1 (ENSOARG00020017521) #34	RELL2 (ENSOARG00020017412) #35	HDAC3 (ENSOARG00020017344) #36	ENSOARG00020017189 #37	ENSOARG00020017139
Siberian musk deer	MODERN SPECIES	48									GRXCR2 (ENSMMSG00000003194) #14	PRELID2 (ENSMMSG00000003206) #15	ENSMMSG00000003223	ENSMMSG00000003232	KCTD16 (ENSMMSG00000003235) #17	ENSMMSG00000003245 #18	ENSMMSG00000003260	NR3C1 (ENSMMSG00000003275) #22	ARHGAP26 (ENSMMSG00000003321) #23	ENSMMSG00000003377	ENSMMSG00000003396 #24	SPRY4 (ENSMMSG00000003413) #25	NDFIP1 (ENSMMSG00000003431) #26	ENSMMSG00000003449 #28	RNF14 (ENSMMSG00000003466) #29	PCDH12 (ENSMMSG00000003488) #30	DELE1 (ENSMMSG00000003513) #31	ENSMMSG00000003546	PCDH1 (ENSMMSG00000003563) #32	ARAP3 (ENSMMSG00000003600) #33	FCHSD1 (ENSMMSG00000003720) #34	RELL2 (ENSMMSG00000003780) #35	HDAC3 (ENSMMSG00000003806) #36
Yarkand deer	MODERN SPECIES	32	STK32A (ENSCHYG00000002472)	PPP2R2B (ENSCHYG00000002400)	ENSCHYG00000002393	GPR151 (ENSCHYG00000002380) #7	TCERG1 (ENSCHYG00000002241) #8	POU4F3 (ENSCHYG00000002164) #9	RBM27 (ENSCHYG00000002059) #10	LARS1 (ENSCHYG00000001948) #11	ENSCHYG00000001917	PLAC8L1 (ENSCHYG00000001902) #12	SH3RF2 (ENSCHYG00000001884) #13	GRXCR2 (ENSCHYG00000001867) #14	PRELID2 (ENSCHYG00000001852) #15	KCTD16 (ENSCHYG00000001801) #17	ENSCHYG00000001725 #18	NR3C1 (ENSCHYG00000001678) #22	ARHGAP26 (ENSCHYG00000001323) #23	FGF1 (ENSCHYG00000001270) #24	SPRY4 (ENSCHYG00000001254) #25	ENSCHYG00000001243	NDFIP1 (ENSCHYG00000001178) #26	GNPDA1 (ENSCHYG00000001122) #28	RNF14 (ENSCHYG00000001095) #29	PCDH12 (ENSCHYG00000001058) #30	DELE1 (ENSCHYG00000001016) #31	PCDH1 (ENSCHYG00000000987) #32	ARAP3 (ENSCHYG00000000730) #33	FCHSD1 (ENSCHYG00000000556) #34	RELL2 (ENSCHYG00000025303) #35	HDAC3 (ENSCHYG00000025260) #36	DIAPH1 (ENSCHYG00000024635) #37
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000153556.A.b.b	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00970000196845
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT01010000228946	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000162690.g	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT01010000228946	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000162690.g	ENSGT00940000159969.b	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B.r #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT01010000228946	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000162690.g	ENSGT00940000159969.b	ENSGT00940000153168.C.a.a #18	ENSGT00390000005848.j.b	ENSGT00940000153305.d.x	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B.r #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT01010000228946	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000162690.g	ENSGT00940000153168.C.a.a #18	ENSGT01100000263511.b.a.a.a.b.a.a.a.b.a.b.a.b.b.a.a.b.a.a.a.b	ENSGT00390000005848.j.b	ENSGT00940000153305.d.x	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B.r #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00970000196845
Narwhal	MODERN SPECIES	298	RBM27 (ENSMMNG00015003667) #10	LARS1 (ENSMMNG00015003613) #11	PLAC8L1 (ENSMMNG00015003586) #12	SH3RF2 (ENSMMNG00015003555) #13	ENSMMNG00015003539	GRXCR2 (ENSMMNG00015003518) #14	PRELID2 (ENSMMNG00015003496) #15	ENSMMNG00015003469	ENSMMNG00015003453	KCTD16 (ENSMMNG00015003368) #17	ENSMMNG00015003351	YIPF5 (ENSMMNG00015003322) #18	ENSMMNG00015003281	ENSMMNG00015003271	ENSMMNG00015003263	NR3C1 (ENSMMNG00015003229) #22	ARHGAP26 (ENSMMNG00015003086) #23	FGF1 (ENSMMNG00015002994) #24	SPRY4 (ENSMMNG00015002971) #25	NDFIP1 (ENSMMNG00015002925) #26	GNPDA1 (ENSMMNG00015002894) #28	RNF14 (ENSMMNG00015002876) #29	PCDH12 (ENSMMNG00015002859) #30	DELE1 (ENSMMNG00015002837) #31	PCDH1 (ENSMMNG00015002819) #32	ARAP3 (ENSMMNG00015002730) #33	FCHSD1 (ENSMMNG00015002690) #34	RELL2 (ENSMMNG00015002647) #35	HDAC3 (ENSMMNG00015002599) #36	ENSMMNG00015002561 #37	ENSMMNG00015002539
Beluga whale	MODERN SPECIES	34	PPP2R2B (ENSDLEG00000003469)	GPR151 (ENSDLEG00000003448) #7	TCERG1 (ENSDLEG00000003319) #8	POU4F3 (ENSDLEG00000003271) #9	RBM27 (ENSDLEG00000003245) #10	LARS (ENSDLEG00000003168) #11	SH3RF2 (ENSDLEG00000003139) #13	PRELID2 (ENSDLEG00000003127) #15	ENSDLEG00000003120	KCTD16 (ENSDLEG00000003115) #17	ENSDLEG00000003106	YIPF5 (ENSDLEG00000003097) #18	ENSDLEG00000003080	ENSDLEG00000003074	ENSDLEG00000003071	NR3C1 (ENSDLEG00000003062) #22	ARHGAP26 (ENSDLEG00000002974) #23	FGF1 (ENSDLEG00000002945) #24	SPRY4 (ENSDLEG00000002933) #25	NDFIP1 (ENSDLEG00000002873) #26	GNPDA1 (ENSDLEG00000002862) #28	RNF14 (ENSDLEG00000002851) #29	PCDH12 (ENSDLEG00000002841) #30	KIAA0141 (ENSDLEG00000002820) #31	ENSDLEG00000002807	PCDH1 (ENSDLEG00000002801) #32	ARAP3 (ENSDLEG00000002782) #33	ENSDLEG00000002747 #34	FCHSD1 (ENSDLEG00000002735) #34	RELL2 (ENSDLEG00000002712) #35	HDAC3 (ENSDLEG00000002572) #36
Vaquita	MODERN SPECIES	14	POU4F3 (ENSPSNG00000001078) #9	RBM27 (ENSPSNG00000001102) #10	LARS1 (ENSPSNG00000001219) #11	ENSPSNG00000001352	SH3RF2 (ENSPSNG00000001368) #13	ENSPSNG00000001397	ENSPSNG00000001406 #14	PRELID2 (ENSPSNG00000001434) #15	ENSPSNG00000001457	KCTD16 (ENSPSNG00000001468) #17	YIPF5 (ENSPSNG00000001481) #18	ENSPSNG00000001497	ENSPSNG00000001516	ENSPSNG00000001546	ENSPSNG00000001561	NR3C1 (ENSPSNG00000001614) #22	ARHGAP26 (ENSPSNG00000001716) #23	FGF1 (ENSPSNG00000001841) #24	SPRY4 (ENSPSNG00000001877) #25	NDFIP1 (ENSPSNG00000001914) #26	GNPDA1 (ENSPSNG00000001937) #28	RNF14 (ENSPSNG00000001958) #29	PCDH12 (ENSPSNG00000001978) #30	DELE1 (ENSPSNG00000002006) #31	PCDH1 (ENSPSNG00000002048) #32	ARAP3 (ENSPSNG00000002102) #33	FCHSD1 (ENSPSNG00000002214) #34	RELL2 (ENSPSNG00000002269) #35	HDAC3 (ENSPSNG00000002314) #36	DIAPH1 (ENSPSNG00000002371) #37	ENSPSNG00000002410
Dolphin	MODERN SPECIES	883																NR3C1 (ENSTTRG00000003260) #22	ARHGAP26 (ENSTTRG00000003253) #23
Sperm whale	MODERN SPECIES	19	TCERG1 (ENSPCTG00005002471) #8	POU4F3 (ENSPCTG00005002418) #9	RBM27 (ENSPCTG00005002371) #10	LARS (ENSPCTG00005002244) #11	PLAC8L1 (ENSPCTG00005002187) #12	SH3RF2 (ENSPCTG00005002153) #13	ENSPCTG00005002139	GRXCR2 (ENSPCTG00005002131) #14	ENSPCTG00005002068 #15	ENSPCTG00005002042	KCTD16 (ENSPCTG00005002030) #17	ENSPCTG00005002016	YIPF5 (ENSPCTG00005002005) #18	ENSPCTG00005001975	ENSPCTG00005001962	NR3C1 (ENSPCTG00005001935) #22	ARHGAP26 (ENSPCTG00005001818) #23	FGF1 (ENSPCTG00005001764) #24	SPRY4 (ENSPCTG00005001745) #25	NDFIP1 (ENSPCTG00005001714) #26	GNPDA1 (ENSPCTG00005001693) #28	RNF14 (ENSPCTG00005001666) #29	DIAPH1 (ENSPCTG00005001591) #37	ENSPCTG00005001532	PCDHGA7 (ENSPCTG00005001525)	PCDHGA4 (ENSPCTG00005001403)	TAF7 (ENSPCTG00005001330)	SLC25A2 (ENSPCTG00005001314)	PCDHB15 (ENSPCTG00005001299)	ENSPCTG00005001283	PCDHB14 (ENSPCTG00005001268)
Blue whale	MODERN SPECIES	14	ENSBMSG00010004370	PPP2R2B (ENSBMSG00010004212)	GPR151 (ENSBMSG00010004103) #7	TCERG1 (ENSBMSG00010004023) #8	POU4F3 (ENSBMSG00010003939) #9	RBM27 (ENSBMSG00010003903) #10	LARS1 (ENSBMSG00010003837) #11	PLAC8L1 (ENSBMSG00010003800) #12	SH3RF2 (ENSBMSG00010003783) #13	GRXCR2 (ENSBMSG00010003760) #14	PRELID2 (ENSBMSG00010003746) #15	KCTD16 (ENSBMSG00010003732) #17	ENSBMSG00010003719	YIPF5 (ENSBMSG00010003706) #18	ENSBMSG00010003675	NR3C1 (ENSBMSG00010003624) #22	ARHGAP26 (ENSBMSG00010003600) #23	FGF1 (ENSBMSG00010003558) #24	SPRY4 (ENSBMSG00010003542) #25	NDFIP1 (ENSBMSG00010003523) #26	GNPDA1 (ENSBMSG00010003508) #28	RNF14 (ENSBMSG00010003493) #29	PCDH12 (ENSBMSG00010003478) #30	DELE1 (ENSBMSG00010003464) #31	PCDH1 (ENSBMSG00010003423) #32	ARAP3 (ENSBMSG00010003360) #33	FCHSD1 (ENSBMSG00010003204) #34	RELL2 (ENSBMSG00010003137) #35	HDAC3 (ENSBMSG00010003120) #36	ENSBMSG00010003107 #37	ENSBMSG00010003086 #37
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT01050000246758	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Carnivora	ANCESTRAL SPECIES	8	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT01050000246758	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Caniformia	ANCESTRAL SPECIES	5	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT01050000246758	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT01050000246758	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Ursidae	ANCESTRAL SPECIES	16	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT01050000246758	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Ursus	ANCESTRAL SPECIES	3	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Polar bear	MODERN SPECIES	173	DPYSL3 (ENSUMAG00000010043)	STK32A (ENSUMAG00000010054)	PPP2R2B (ENSUMAG00000010087)	GPR151 (ENSUMAG00000010178) #7	TCERG1 (ENSUMAG00000010213) #8	POU4F3 (ENSUMAG00000010562) #9	RBM27 (ENSUMAG00000010569) #10	LARS1 (ENSUMAG00000010585) #11	PLAC8L1 (ENSUMAG00000010598) #12	SH3RF2 (ENSUMAG00000010600) #13	GRXCR2 (ENSUMAG00000010609) #14	PRELID2 (ENSUMAG00000010620) #15	ENSUMAG00000010649 #17	ENSUMAG00000010656 #17	YIPF5 (ENSUMAG00000010661) #18	NR3C1 (ENSUMAG00000010689) #22	ARHGAP26 (ENSUMAG00000010809) #23	FGF1 (ENSUMAG00000011608) #24	SPRY4 (ENSUMAG00000011636) #25	NDFIP1 (ENSUMAG00000011647) #26	ENSUMAG00000011650	GNPDA1 (ENSUMAG00000011661) #28	RNF14 (ENSUMAG00000011666) #29	PCDH12 (ENSUMAG00000011675) #30	DELE1 (ENSUMAG00000011684) #31	PCDH1 (ENSUMAG00000011759) #32	ARAP3 (ENSUMAG00000011782) #33	FCHSD1 (ENSUMAG00000011810) #34	RELL2 (ENSUMAG00000011823) #35	HDAC3 (ENSUMAG00000011842) #36	DIAPH1 (ENSUMAG00000011950) #37
American black bear	MODERN SPECIES	29																NR3C1 (ENSUAMG00000022894) #22	ENSUAMG00000022897 #23	ENSUAMG00000022969 #23	FGF1 (ENSUAMG00000022980) #24	SPRY4 (ENSUAMG00000022987) #25
Giant Panda	MODERN SPECIES	13	DPYSL3 (ENSAMEG00000003024)	STK32A (ENSAMEG00000003153)	PPP2R2B (ENSAMEG00000017620)	GPR151 (ENSAMEG00000019024) #7	TCERG1 (ENSAMEG00000017609) #8	POU4F3 (ENSAMEG00000027914) #9	POU4F3 (ENSAMEG00000026456) #9	RBM27 (ENSAMEG00000017593) #10	LARS1 (ENSAMEG00000017584) #11	PLAC8L1 (ENSAMEG00000017582) #12	SH3RF2 (ENSAMEG00000017567) #13	GRXCR2 (ENSAMEG00000017563) #14	PRELID2 (ENSAMEG00000004019) #15	KCTD16 (ENSAMEG00000010129) #17	YIPF5 (ENSAMEG00000010135) #18	NR3C1 (ENSAMEG00000010159) #22	ARHGAP26 (ENSAMEG00000010167) #23	FGF1 (ENSAMEG00000010197) #24	SPRY4 (ENSAMEG00000020129) #25	NDFIP1 (ENSAMEG00000010200) #26	GNPDA1 (ENSAMEG00000010219) #28	RNF14 (ENSAMEG00000010249) #29	PCDH12 (ENSAMEG00000010273) #30	DELE1 (ENSAMEG00000010287) #31	ENSAMEG00000030636	PCDH1 (ENSAMEG00000010278) #32	ARAP3 (ENSAMEG00000010309) #33	FCHSD1 (ENSAMEG00000010382) #34	RELL2 (ENSAMEG00000010425) #35	HDAC3 (ENSAMEG00000010427) #36	DIAPH1 (ENSAMEG00000010486) #37
Mustelinae	ANCESTRAL SPECIES	17	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
American mink	MODERN SPECIES	230														KCD16 (ENSNVIG00000020856) #17	YIPF5 (ENSNVIG00000020864) #18	NR3C1 (ENSNVIG00000020888) #22	ARHGAP26 (ENSNVIG00000020957) #23	FGF1 (ENSNVIG00000021093) #24	ENSNVIG00000021146	SPRY4 (ENSNVIG00000021156) #25	NDFIP1 (ENSNVIG00000021164) #26	GNPDA1 (ENSNVIG00000021171) #28	RNF14 (ENSNVIG00000021191) #29	PCDH12 (ENSNVIG00000021215) #30	DELE1 (ENSNVIG00000021230) #31	PCDH1 (ENSNVIG00000021244) #32
Ferret	MODERN SPECIES	175	DPYSL3 (ENSMPUG00000007786)	STK32A (ENSMPUG00000007797)	ENSMPUG00000007807	PPP2R2B (ENSMPUG00000007809)	GPR151 (ENSMPUG00000020043) #7	TCERG1 (ENSMPUG00000007817) #8	POU4F3 (ENSMPUG00000007828) #9	RBM27 (ENSMPUG00000007832) #10	LARS1 (ENSMPUG00000007844) #11	PLAC8L1 (ENSMPUG00000007862) #12	SH3RF2 (ENSMPUG00000007867) #13	ENSMPUG00000007870 #14	ENSMPUG00000007874	KCTD16 (ENSMPUG00000020044) #17	YIPF5 (ENSMPUG00000007876) #18	NR3C1 (ENSMPUG00000007881) #22	ARHGAP26 (ENSMPUG00000007885) #23	FGF1 (ENSMPUG00000007946) #24	SPRY4 (ENSMPUG00000020045) #25	NDFIP1 (ENSMPUG00000007951) #26	GNPDA1 (ENSMPUG00000007954) #28	RNF14 (ENSMPUG00000007962) #29	PCDH12 (ENSMPUG00000007971) #30	DELE1 (ENSMPUG00000007978) #31	PCDH1 (ENSMPUG00000007992) #32	ARAP3 (ENSMPUG00000007996) #33	FCHSD1 (ENSMPUG00000008022) #34	RELL2 (ENSMPUG00000008178) #35	HDAC3 (ENSMPUG00000008187) #36	DIAPH1 (ENSMPUG00000008293) #37	ENSMPUG00000008317
Canidae	ANCESTRAL SPECIES	29	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00390000018173.a.a.b	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000164266
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00390000018173.a.a.b	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00950000183206.b.c.a.a.a.a	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000164266
Dog	MODERN SPECIES	11	STK32A (ENSCAFG00845023441)	PPP2R2B (ENSCAFG00845023118)	GPR151 (ENSCAFG00845022985) #7	TCERG1 (ENSCAFG00845022184) #8	POU4F3 (ENSCAFG00845021927) #9	RBM27 (ENSCAFG00845021678) #10	LARS1 (ENSCAFG00845020164) #11	PLAC8L1 (ENSCAFG00845019862) #12	ENSCAFG00845019832	SH3RF2 (ENSCAFG00845019659) #13	GRXCR2 (ENSCAFG00845019581) #14	PRELID2 (ENSCAFG00845019475) #15	ENSCAFG00845019408	KCTD16 (ENSCAFG00845019378) #17	YIPF5 (ENSCAFG00845019282) #18	NR3C1 (ENSCAFG00845019024) #22	ARHGAP26 (ENSCAFG00845018298) #23	ENSCAFG00845018015	FGF1 (ENSCAFG00845017942) #24	SPRY4 (ENSCAFG00845017769) #25	NDFIP1 (ENSCAFG00845017691) #26	GNPDA1 (ENSCAFG00845017587) #28	RNF14 (ENSCAFG00845017515) #29	PCDH12 (ENSCAFG00845017466) #30	DELE1 (ENSCAFG00845017218) #31	PCDH1 (ENSCAFG00845017072) #32	ARAP3 (ENSCAFG00845016835) #33	FCHSD1 (ENSCAFG00845016411) #34	RELL2 (ENSCAFG00845016298) #35	HDAC3 (ENSCAFG00845016246) #36	DIAPH1 (ENSCAFG00845015899) #37
Dingo	MODERN SPECIES	98													ENSCAFG00020019869	KCTD16 (ENSCAFG00020019874) #17	YIPF5 (ENSCAFG00020019879) #18	NR3C1 (ENSCAFG00020019903) #22	ENSCAFG00020019915 #23	ENSCAFG00020019975 #23	FGF1 (ENSCAFG00020020051) #24	SPRY4 (ENSCAFG00020020057) #25	NDFIP1 (ENSCAFG00020020061) #26	GNPDA1 (ENSCAFG00020020065) #28	RNF14 (ENSCAFG00020020070) #29	PCDH12 (ENSCAFG00020020076) #30	DELE1 (ENSCAFG00020020081) #31	PCDH1 (ENSCAFG00020020102) #32	ARAP3 (ENSCAFG00020020116) #33	FCHSD1 (ENSCAFG00020020332) #34	RELL2 (ENSCAFG00020020433) #35	HDAC3 (ENSCAFG00020020439) #36	DIAPH1 (ENSCAFG00020020478) #37
Red fox	MODERN SPECIES	4	GPR151 (ENSVVUG00000021169) #7	TCERG1 (ENSVVUG00000021150) #8	ENSVVUG00000021146	POU4F3 (ENSVVUG00000021136) #9	RBM27 (ENSVVUG00000021131) #10	LARS (ENSVVUG00000021124) #11	PLAC8L1 (ENSVVUG00000021122) #12	ENSVVUG00000021121	SH3RF2 (ENSVVUG00000021119) #13	GRXCR2 (ENSVVUG00000021117) #14	PRELID2 (ENSVVUG00000021114) #15	ENSVVUG00000021113	ENSVVUG00000021101 #17	ENSVVUG00000021099 #17	YIPF5 (ENSVVUG00000021096) #18	NR3C1 (ENSVVUG00000021086) #22	ARHGAP26 (ENSVVUG00000021049) #23	FGF1 (ENSVVUG00000021039) #24	ENSVVUG00000021037	SPRY4 (ENSVVUG00000021030) #25	NDFIP1 (ENSVVUG00000021026) #26	ENSVVUG00000021023	GNPDA1 (ENSVVUG00000021018) #28	RNF14 (ENSVVUG00000021016) #29	PCDH12 (ENSVVUG00000021014) #30	DELE1 (ENSVVUG00000021010) #31	PCDH1 (ENSVVUG00000021008) #32	ARAP3 (ENSVVUG00000020896) #33	FCHSD1 (ENSVVUG00000020811) #34	RELL2 (ENSVVUG00000020795) #35	HDAC3 (ENSVVUG00000019813) #36
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Panthera	ANCESTRAL SPECIES	6	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Tiger	MODERN SPECIES	107														KCTD16 (ENSPTIG00000008553) #17	YIPF5 (ENSPTIG00000007830) #18	NR3C1 (ENSPTIG00000000485) #22	ARHGAP26 (ENSPTIG00000021468) #23	FGF1 (ENSPTIG00000020589) #24	SPRY4 (ENSPTIG00000020238) #25	NDFIP1 (ENSPTIG00000020133) #26	ENSPTIG00000019892	GNPDA1 (ENSPTIG00000019610) #28	RNF14 (ENSPTIG00000017738) #29	PCDH12 (ENSPTIG00000017496) #30	DELE1 (ENSPTIG00000016048) #31	PCDH1 (ENSPTIG00000015128) #32	ARAP3 (ENSPTIG00000012770) #33	FCHSD1 (ENSPTIG00000009206) #34	RELL2 (ENSPTIG00000007415) #35	HDAC3 (ENSPTIG00000006047) #36	DIAPH1 (ENSPTIG00000003602) #37
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
leopard	MODERN SPECIES	98														KCTD16 (ENSPPRG00000000825) #17	YIPF5 (ENSPPRG00000001195) #18	NR3C1 (ENSPPRG00000002713) #22	ARHGAP26 (ENSPPRG00000005201) #23	FGF1 (ENSPPRG00000006650) #24	SPRY4 (ENSPPRG00000007021) #25	NDFIP1 (ENSPPRG00000008202) #26	ENSPPRG00000008366	GNPDA1 (ENSPPRG00000009524) #28	RNF14 (ENSPPRG00000012514) #29	PCDH12 (ENSPPRG00000012842) #30	DELE1 (ENSPPRG00000013758) #31	PCDH1 (ENSPPRG00000014658) #32	ARAP3 (ENSPPRG00000021607) #33	FCHSD1 (ENSPPRG00000000859) #34	RELL2 (ENSPPRG00000002021) #35	HDAC3 (ENSPPRG00000002299) #36	DIAPH1 (ENSPPRG00000008640) #37
lion	MODERN SPECIES		DPYSL3 (ENSPLOG00000010354)	STK32A (ENSPLOG00000010529)	PPP2R2B (ENSPLOG00000010720)	GPR151 (ENSPLOG00000010936) #7	TCERG1 (ENSPLOG00000010968) #8	POU4F3 (ENSPLOG00000011049) #9	RBM27 (ENSPLOG00000011091) #10	LARS1 (ENSPLOG00000011167) #11	PLAC8L1 (ENSPLOG00000000005) #12	SH3RF2 (ENSPLOG00000000007) #13	ENSPLOG00000000009	GRXCR2 (ENSPLOG00000000011) #14	PRELID2 (ENSPLOG00000000017) #15	KCTD16 (ENSPLOG00000000025) #17	YIPF5 (ENSPLOG00000000028) #18	NR3C1 (ENSPLOG00000000037) #22	ARHGAP26 (ENSPLOG00000000069) #23	FGF1 (ENSPLOG00000000125) #24	SPRY4 (ENSPLOG00000000139) #25	NDFIP1 (ENSPLOG00000000146) #26	GNPDA1 (ENSPLOG00000000164) #28	ENSPLOG00000000179	RNF14 (ENSPLOG00000000188) #29	PCDH12 (ENSPLOG00000000204) #30	DELE1 (ENSPLOG00000000214) #31	PCDH1 (ENSPLOG00000000233) #32	ARAP3 (ENSPLOG00000000294) #33	FCHSD1 (ENSPLOG00000000420) #34	RELL2 (ENSPLOG00000000497) #35	HDAC3 (ENSPLOG00000000526) #36	DIAPH1 (ENSPLOG00000000570) #37
Cat	MODERN SPECIES		STK32A (ENSFCAG00000008247)	PPP2R2B (ENSFCAG00000010065)	GPR151 (ENSFCAG00000010064) #7	TCERG1 (ENSFCAG00000010062) #8	POU4F3 (ENSFCAG00000030722) #9	RBM27 (ENSFCAG00000005792) #10	LARS1 (ENSFCAG00000008715) #11	PLAC8L1 (ENSFCAG00000008714) #12	ENSFCAG00000047144	ENSFCAG00000050337	SH3RF2 (ENSFCAG00000008712) #13	GRXCR2 (ENSFCAG00000008710) #14	PRELID2 (ENSFCAG00000003768) #15	KCTD16 (ENSFCAG00000008002) #17	YIPF5 (ENSFCAG00000031350) #18	NR3C1 (ENSFCAG00000026823) #22	ARHGAP26 (ENSFCAG00000009125) #23	FGF1 (ENSFCAG00000035589) #24	SPRY4 (ENSFCAG00000003690) #25	NDFIP1 (ENSFCAG00000009405) #26	GNPDA1 (ENSFCAG00000009404) #28	RNF14 (ENSFCAG00000009402) #29	PCDH12 (ENSFCAG00000009401) #30	DELE1 (ENSFCAG00000009397) #31	PCDH1 (ENSFCAG00000009395) #32	ARAP3 (ENSFCAG00000006908) #33	FCHSD1 (ENSFCAG00000006907) #34	RELL2 (ENSFCAG00000006905) #35	HDAC3 (ENSFCAG00000006904) #36	DIAPH1 (ENSFCAG00000031011) #37	ENSFCAG00000050736
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT01050000246758	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Chiroptera	ANCESTRAL SPECIES	1	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000164266
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00390000009781 #19	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000164266
Greater horseshoe bat	MODERN SPECIES	16	STK32A (ENSRFEG00010009591)	PPP2R2B (ENSRFEG00010009245)	GPR151 (ENSRFEG00010009170) #7	TCERG1 (ENSRFEG00010009044) #8	POU4F3 (ENSRFEG00010008985) #9	RBM27 (ENSRFEG00010008875) #10	LARS1 (ENSRFEG00010008684) #11	PLAC8L1 (ENSRFEG00010008620) #12	SH3RF2 (ENSRFEG00010008576) #13	GRXCR2 (ENSRFEG00010008510) #14	PRELID2 (ENSRFEG00010008426) #15	KCTD16 (ENSRFEG00010008389) #17	ENSRFEG00010008367	YIPF5 (ENSRFEG00010008320) #18	HMHB1 (ENSRFEG00010008275) #19	NR3C1 (ENSRFEG00010008132) #22	ARHGAP26 (ENSRFEG00010007845) #23	FGF1 (ENSRFEG00010007768) #24	SPRY4 (ENSRFEG00010007705) #25	NDFIP1 (ENSRFEG00010007668) #26	GNPDA1 (ENSRFEG00010007628) #28	RNF14 (ENSRFEG00010007576) #29	PCDH12 (ENSRFEG00010007543) #30	DELE1 (ENSRFEG00010007416) #31	PCDH1 (ENSRFEG00010007326) #32	ENSRFEG00010007296	ARAP3 (ENSRFEG00010007170) #33	FCHSD1 (ENSRFEG00010006953) #34	RELL2 (ENSRFEG00010006841) #35	ENSRFEG00010006781	DIAPH1 (ENSRFEG00010006574) #37
Microbat	MODERN SPECIES	965	ENSMLUG00000026063	ENSMLUG00000015913	ENSMLUG00000028697	GPR151 (ENSMLUG00000015909) #7	TCERG1 (ENSMLUG00000015879) #8	POU4F3 (ENSMLUG00000026870) #9	RBM27 (ENSMLUG00000000643) #10	LARS1 (ENSMLUG00000001125) #11	PLAC8L1 (ENSMLUG00000001117) #12	SH3RF2 (ENSMLUG00000001112) #13	GRXCR2 (ENSMLUG00000028885) #14	ENSMLUG00000027921	PRELID2 (ENSMLUG00000001107) #15	KCTD16 (ENSMLUG00000012507) #17	YIPF5 (ENSMLUG00000011143) #18	NR3C1 (ENSMLUG00000011289) #22	ENSMLUG00000024725 #23	ENSMLUG00000007111 #23	FGF1 (ENSMLUG00000007107) #24	SPRY4 (ENSMLUG00000012443) #25	NDFIP1 (ENSMLUG00000003418) #26	ENSMLUG00000003413 #28	ENSMLUG00000003410 #29	PCDH12 (ENSMLUG00000003402) #30	DELE1 (ENSMLUG00000013039) #31	PCDH1 (ENSMLUG00000016121) #32	ARAP3 (ENSMLUG00000008745) #33	FCHSD1 (ENSMLUG00000008699) #34	RELL2 (ENSMLUG00000023054) #35	HDAC3 (ENSMLUG00000008662) #36	DIAPH1 (ENSMLUG00000001822) #37
Megabat	MODERN SPECIES	7010																NR3C1 (ENSPVAG00000014255) #22
Equus	ANCESTRAL SPECIES	6	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00950000182891.a.a.b.a.a.a.a	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT01050000246758	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37
Donkey	MODERN SPECIES	3	STK32A (ENSEASG00005020638)	PPP2R2B (ENSEASG00005020634)	GPR151 (ENSEASG00005020631) #7	TCERG1 (ENSEASG00005020617) #8	POU4F3 (ENSEASG00005020601) #9	RBM27 (ENSEASG00005020588) #10	ENSEASG00005036402	LARS1 (ENSEASG00005020569) #11	PLAC8L1 (ENSEASG00005020565) #12	SH3RF2 (ENSEASG00005020563) #13	ENSEASG00005020561 #14	PRELID2 (ENSEASG00005030270) #15	KCTD16 (ENSEASG00005020544) #17	YIPF5 (ENSEASG00005020543) #18	ENSEASG00005020540	NR3C1 (ENSEASG00005020535) #22	ARHGAP26 (ENSEASG00005020526) #23	FGF1 (ENSEASG00005029769) #24	SPRY4 (ENSEASG00005028548) #25	NDFIP1 (ENSEASG00005020512) #26	GNPDA1 (ENSEASG00005020509) #28	RNF14 (ENSEASG00005020505) #29	PCDH12 (ENSEASG00005020502) #30	DELE1 (ENSEASG00005020498) #31	PCDH1 (ENSEASG00005020494) #32	ARAP3 (ENSEASG00005020395) #33	FCHSD1 (ENSEASG00005020339) #34	RELL2 (ENSEASG00005020320) #35	HDAC3 (ENSEASG00005018816) #36	DIAPH1 (ENSEASG00005018237) #37	ENSEASG00005018159
Horse	MODERN SPECIES	5	STK32A (ENSECAG00000014935)	PPP2R2B (ENSECAG00000019153)	GPR151 (ENSECAG00000005037) #7	TCERG1 (ENSECAG00000009936) #8	ENSECAG00000031292	POU4F3 (ENSECAG00000018410) #9	RBM27 (ENSECAG00000000883) #10	ENSECAG00000036137	LARS1 (ENSECAG00000008963) #11	PLAC8L1 (ENSECAG00000024464) #12	SH3RF2 (ENSECAG00000024467) #13	GRXCR2 (ENSECAG00000024891) #14	PRELID2 (ENSECAG00000024895) #15	KCTD16 (ENSECAG00000005159) #17	YIPF5 (ENSECAG00000003965) #18	NR3C1 (ENSECAG00000009473) #22	ARHGAP26 (ENSECAG00000012336) #23	FGF1 (ENSECAG00000020769) #24	SPRY4 (ENSECAG00000005384) #25	NDFIP1 (ENSECAG00000021907) #26	GNPDA1 (ENSECAG00000023055) #28	ENSECAG00000036167	RNF14 (ENSECAG00000003091) #29	PCDH12 (ENSECAG00000011213) #30	DELE1 (ENSECAG00000011434) #31	ENSECAG00000039829	PCDH1 (ENSECAG00000015153) #32	ARAP3 (ENSECAG00000015544) #33	FCHSD1 (ENSECAG00000017933) #34	RELL2 (ENSECAG00000020085) #35	HDAC3 (ENSECAG00000020589) #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000156385 #22
Common shrew	MODERN SPECIES	1055																NR3C1 (ENSSARG00000000617) #22
Hedgehog	MODERN SPECIES	1564																NR3C1 (ENSEEUG00000008977) #22
Atlantogenata	ANCESTRAL SPECIES		ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.n #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Xenarthra	ANCESTRAL SPECIES	54														ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.n #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000157822	ENSGT00940000164266
Sloth	MODERN SPECIES	1302																NR3C1 (ENSCHOG00000013777) #22
Armadillo	MODERN SPECIES	927										ENSDNOG00000045708	ENSDNOG00000041216	ENSDNOG00000035490 #17	ENSDNOG00000006671 #17	ENSDNOG00000014497 #18	ENSDNOG00000043895	NR3C1 (ENSDNOG00000010685) #22	ARHGAP26 (ENSDNOG00000000580) #23	FGF1 (ENSDNOG00000018018) #24	SPRY4 (ENSDNOG00000039808) #25	NDFIP1 (ENSDNOG00000002760) #26	GNPDA1 (ENSDNOG00000007804) #28	ENSDNOG00000000698 #29	PCDH12 (ENSDNOG00000035553) #30	DELE1 (ENSDNOG00000002303) #31	PCDH1 (ENSDNOG00000039222) #32	ARAP3 (ENSDNOG00000008355) #33	FCHSD1 (ENSDNOG00000043146) #34	RELL2 (ENSDNOG00000047431) #35	HDAC3 (ENSDNOG00000008318) #36	ENSDNOG00000007243	PCDHGB5 (ENSDNOG00000045032)
Afrotheria	ANCESTRAL SPECIES	7	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.n #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232	ENSGT00940000161193
Afrotheria_a	ANCESTRAL SPECIES	7	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507.n #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232	ENSGT00940000161193
Elephant	MODERN SPECIES	2	DPYSL3 (ENSLAFG00000013018)	STK32A (ENSLAFG00000013013)	PPP2R2B (ENSLAFG00000013806)	GPR151 (ENSLAFG00000013805) #7	TCERG1 (ENSLAFG00000013796) #8	ENSLAFG00000026509	POU4F3 (ENSLAFG00000006932) #9	RBM27 (ENSLAFG00000022447) #10	LARS1 (ENSLAFG00000000318) #11	PLAC8L1 (ENSLAFG00000000316) #12	SH3RF2 (ENSLAFG00000000315) #13	GRXCR2 (ENSLAFG00000018464) #14	PRELID2 (ENSLAFG00000018461) #15	KCTD16 (ENSLAFG00000016966) #17	YIPF5 (ENSLAFG00000016961) #18	NR3C1 (ENSLAFG00000005015) #22	ARHGAP26 (ENSLAFG00000017734) #23	FGF1 (ENSLAFG00000005484) #24	NDFIP1 (ENSLAFG00000016964) #26	GNPDA1 (ENSLAFG00000003999) #28	RNF14 (ENSLAFG00000007438) #29	PCDH12 (ENSLAFG00000017085) #30	DELE1 (ENSLAFG00000017081) #31	ENSLAFG00000032418	ARAP3 (ENSLAFG00000007967) #33	FCHSD1 (ENSLAFG00000028321) #34	RELL2 (ENSLAFG00000031336) #35	ENSLAFG00000007960	DIAPH1 (ENSLAFG00000007578) #37	PCDHGC5 (ENSLAFG00000004545)	ENSLAFG00000001302
Tenrec	MODERN SPECIES	1513																NR3C1 (ENSETEG00000014280) #22
Marsupialia	ANCESTRAL SPECIES	9	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT01070000253822.E	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b.ab #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00970000196845
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT01070000253822.E	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b.ab #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT01070000253822.E	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b.ab #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00940000162232
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT01070000253822.E.l.a	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b.ab #28	ENSGT00940000154507 #29	ENSGT00940000160403 #30	ENSGT00390000002137 #31	ENSGT00940000155521 #32	ENSGT00940000158869 #33	ENSGT00510000046732.B #34	ENSGT00940000160541 #35	ENSGT00940000160487 #36	ENSGT00940000159910 #37	ENSGT00970000196845
Common wonbat	MODERN SPECIES	1087	ENSVURG00010008320	DPYSL3 (ENSVURG00010008394)	STK32A (ENSVURG00010008433)	PPP2R2B (ENSVURG00010008487)	TCERG1 (ENSVURG00010008636) #8	GPR151 (ENSVURG00010008710) #7	POU4F3 (ENSVURG00010008715) #9	RBM27 (ENSVURG00010008743) #10	LARS1 (ENSVURG00010008801) #11	SH3RF2 (ENSVURG00010008874) #13	GRXCR2 (ENSVURG00010008892) #14	PRELID2 (ENSVURG00010008901) #15	KCTD16 (ENSVURG00010008934) #17	YIPF5 (ENSVURG00010008949) #18	ENSVURG00010008958	NR3C1 (ENSVURG00010009008) #22	ARHGAP26 (ENSVURG00010009050) #23	FGF1 (ENSVURG00010009086) #24	SPRY4 (ENSVURG00010009111) #25	NDFIP1 (ENSVURG00010009127) #26	GNPDA1 (ENSVURG00010009154) #28	RNF14 (ENSVURG00010009162) #29	PCDH12 (ENSVURG00010009180) #30	DELE1 (ENSVURG00010009189) #31	PCDH1 (ENSVURG00010009210) #32	ENSVURG00010009235 #33	FCHSD1 (ENSVURG00010009285) #34	RELL2 (ENSVURG00010009310) #35	HDAC3 (ENSVURG00010009316) #36	ENSVURG00010009335 #37	ENSVURG00010009403
koala	MODERN SPECIES	107											KCTD16 (ENSPCIG00000016358) #17	YIPF5 (ENSPCIG00000029154) #18	ENSPCIG00000029155	ENSPCIG00000029156	ENSPCIG00000029905	NR3C1 (ENSPCIG00000029903) #22	ARHGAP26 (ENSPCIG00000029894) #23	FGF1 (ENSPCIG00000029890) #24	SPRY4 (ENSPCIG00000029884) #25	NDFIP1 (ENSPCIG00000029878) #26	ENSPCIG00000029880	ENSPCIG00000029876 #28	RNF14 (ENSPCIG00000029875) #29	DELE1 (ENSPCIG00000029872) #31	PCDH12 (ENSPCIG00000029873) #30	PCDH1 (ENSPCIG00000029870) #32	ARAP3 (ENSPCIG00000029861) #33	FCHSD1 (ENSPCIG00000029858) #34	RELL2 (ENSPCIG00000029856) #35	HDAC3 (ENSPCIG00000029855) #36	ENSPCIG00000012530
Wallaby	MODERN SPECIES	2249																NR3C1 (ENSMEUG00000009869) #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000015563	ENSSHAG00000020812	ENSSHAG00000014038	ENSSHAG00000024017	STK32A (ENSSHAG00000013781)	GPR151 (ENSSHAG00000026077) #7	TCERG1 (ENSSHAG00000009179) #8	POU4F3 (ENSSHAG00000008089) #9	RBM27 (ENSSHAG00000006988) #10	LARS1 (ENSSHAG00000006084) #11	SH3RF2 (ENSSHAG00000002066) #13	GRXCR2 (ENSSHAG00000008086) #14	PRELID2 (ENSSHAG00000024365) #15	KCTD16 (ENSSHAG00000005464) #17	YIPF5 (ENSSHAG00000004034) #18	NR3C1 (ENSSHAG00000001727) #22	ARHGAP26 (ENSSHAG00000011097) #23	FGF1 (ENSSHAG00000009313) #24	SPRY4 (ENSSHAG00000024412) #25	NDFIP1 (ENSSHAG00000023493) #26	GNPDA1 (ENSSHAG00000013086) #28	RNF14 (ENSSHAG00000012984) #29	PCDH12 (ENSSHAG00000012818) #30	DELE1 (ENSSHAG00000012735) #31	PCDH1 (ENSSHAG00000021186) #32	FCHSD1 (ENSSHAG00000011119) #34	RELL2 (ENSSHAG00000011052) #35	ARAP3 (ENSSHAG00000020914) #33	ENSSHAG00000010517	ENSSHAG00000029672	PCDHGA2 (ENSSHAG00000009569)
Opossum	MODERN SPECIES		ENSMODG00000010051	STK32A (ENSMODG00000010041)	PPP2R2B (ENSMODG00000010096)	GPR151 (ENSMODG00000010101) #7	TCERG1 (ENSMODG00000010124) #8	POU4F3 (ENSMODG00000010137) #9	RBM27 (ENSMODG00000010182) #10	LARS1 (ENSMODG00000010231) #11	PLAC8L1 (ENSMODG00000010239) #12	SH3RF2 (ENSMODG00000010250) #13	GRXCR2 (ENSMODG00000023740) #14	PRELID2 (ENSMODG00000010256) #15	KCTD16 (ENSMODG00000023742) #17	YIPF5 (ENSMODG00000010287) #18	ENSMODG00000010314	NR3C1 (ENSMODG00000010319) #22	ARHGAP26 (ENSMODG00000010362) #23	FGF1 (ENSMODG00000029105) #24	SPRY4 (ENSMODG00000023756) #25	NDFIP1 (ENSMODG00000010383) #26	ENSMODG00000010398 #28	RNF14 (ENSMODG00000010433) #29	PCDH12 (ENSMODG00000010441) #30	DELE1 (ENSMODG00000010456) #31	PCDH1 (ENSMODG00000010471) #32	ARAP3 (ENSMODG00000010533) #33	FCHSD1 (ENSMODG00000010585) #34	RELL2 (ENSMODG00000010603) #35	HDAC3 (ENSMODG00000010634) #36	DIAPH1 (ENSMODG00000010684) #37	ENSMODG00000050868
Platypus	MODERN SPECIES	84	NSG2 (ENSOANG00000014066)	MSX2 (ENSOANG00000038291)	DRD1 (ENSOANG00000015988)	SFXN1 (ENSOANG00000049587)	JAKMIP2 (ENSOANG00000012565)	DPYSL3 (ENSOANG00000012564)	ENSOANG00000008710 #9	RBM27 (ENSOANG00000012563) #10	LARS1 (ENSOANG00000005755) #11	ENSOANG00000032054 #12	SH3RF2 (ENSOANG00000005754) #13	GRXCR2 (ENSOANG00000050122) #14	PRELID2 (ENSOANG00000043534) #15	KCTD16 (ENSOANG00000005749) #17	YIPF5 (ENSOANG00000005747) #18	NR3C1 (ENSOANG00000005745) #22	ARHGAP26 (ENSOANG00000046105) #23	SPRY4 (ENSOANG00000050843) #25	NDFIP1 (ENSOANG00000044026) #26	ENSOANG00000038385 #28	RNF14 (ENSOANG00000007432) #29	HSPA4 (ENSOANG00000007430)	ENSOANG00000007429	AFF4 (ENSOANG00000007428)	ENSOANG00000048396	LEAP2 (ENSOANG00000048336)	UQCRQ (ENSOANG00000042160)	GDF9 (ENSOANG00000044501)	ENSOANG00000049290	SOWAHA (ENSOANG00000036102)	SEPTIN8 (ENSOANG00000007424)
Sauria	ANCESTRAL SPECIES	17	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Lepidosauria	ANCESTRAL SPECIES	15	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068	ENSGT00940000162679
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068	ENSGT00940000162679
Common wall lizard	MODERN SPECIES	10	PPP2R2B (ENSPMRG00000011127)	GPR151 (ENSPMRG00000011135) #7	TCERG1 (ENSPMRG00000011142) #8	POU4F3 (ENSPMRG00000011165) #9	ENSPMRG00000011183 #10	ENSPMRG00000011273 #10	LARS1 (ENSPMRG00000011323) #11	PLAC8L1 (ENSPMRG00000011356) #12	SH3RF2 (ENSPMRG00000011363) #13	GRXCR2 (ENSPMRG00000011374) #14	PRELID2 (ENSPMRG00000011378) #15	ENSPMRG00000011383	KCTD16 (ENSPMRG00000011385) #17	YIPF5 (ENSPMRG00000011389) #18	ENSPMRG00000011394	NR3C1 (ENSPMRG00000011396) #22	ARHGAP26 (ENSPMRG00000011404) #23	FGF1 (ENSPMRG00000011436) #24	ENSPMRG00000011440	SPRY4 (ENSPMRG00000011441) #25	NDFIP1 (ENSPMRG00000011446) #26	ENSPMRG00000011453 #28	RNF14 (ENSPMRG00000011457) #29	HSPA4 (ENSPMRG00000011460)	ZCCHC10 (ENSPMRG00000011467)	AFF4 (ENSPMRG00000011471)	ENSPMRG00000011489	LEAP2 (ENSPMRG00000011494)	GDF9 (ENSPMRG00000011503)	ENSPMRG00000011507	SOWAHA (ENSPMRG00000011515)
Argentine black and white tegu	MODERN SPECIES	1	JAKMIP2 (ENSSMRG00000018139)	DPYSL3 (ENSSMRG00000018135)	STK32A (ENSSMRG00000018063)	PPP2R2B (ENSSMRG00000018051)	GPR151 (ENSSMRG00000018046) #7	TCERG1 (ENSSMRG00000018044) #8	POU4F3 (ENSSMRG00000018043) #9	RBM27 (ENSSMRG00000018037) #10	LARS1 (ENSSMRG00000018034) #11	PLAC8L1 (ENSSMRG00000018033) #12	SH3RF2 (ENSSMRG00000018031) #13	GRXCR2 (ENSSMRG00000018028) #14	PRELID2 (ENSSMRG00000018026) #15	KCTD16 (ENSSMRG00000018011) #17	YIPF5 (ENSSMRG00000018010) #18	NR3C1 (ENSSMRG00000018001) #22	ARHGAP26 (ENSSMRG00000017990) #23	FGF1 (ENSSMRG00000017987) #24	SPRY4 (ENSSMRG00000017986) #25	NDFIP1 (ENSSMRG00000017985) #26	GNPDA1 (ENSSMRG00000017984) #28	RNF14 (ENSSMRG00000017983) #29	HSPA4 (ENSSMRG00000017982)	ZCCHC10 (ENSSMRG00000017981)	AFF4 (ENSSMRG00000017975)	LEAP2 (ENSSMRG00000017974)	ENSSMRG00000017973	ENSSMRG00000017971	GDF9 (ENSSMRG00000017969)	ENSSMRG00000017965	ENSSMRG00000017962
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254.d #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068	ENSGT00940000162679
Elapidae	ANCESTRAL SPECIES	2	ENSGT01030000234527.A.a.b.b.a.o	ENSGT00940000158185	ENSGT00990000213989	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254.d #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068	ENSGT00940000162679
Elapidae_a	ANCESTRAL SPECIES	11	ENSGT01030000234527.A.a.b.b.a.o	ENSGT00940000158185	ENSGT00990000213989	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254.d #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068	ENSGT00940000162679
Blue-lipped sea krait	DUPLICATION
Blue-lipped sea krait	MODERN SPECIES	4760																ENSLLTG00000005005 #22
Blue-lipped sea krait	MODERN SPECIES	4759																ENSLLTG00000004991 #22
Acanthophiinae	ANCESTRAL SPECIES	12	ENSGT01030000234527.A.a.b.b.a.o	ENSGT00940000158185	ENSGT00990000213989	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254.d #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068	ENSGT00940000162679
Mainland tiger snake	MODERN SPECIES	4	ENSNSUG00000010333	PPP2R2B (ENSNSUG00000010328)	GPR151 (ENSNSUG00000010327) #7	TCERG1 (ENSNSUG00000010326) #8	POU4F3 (ENSNSUG00000010325) #9	RBM27 (ENSNSUG00000010322) #10	LARS1 (ENSNSUG00000010297) #11	PLAC8L1 (ENSNSUG00000010295) #12	SH3RF2 (ENSNSUG00000010292) #13	GRXCR2 (ENSNSUG00000010291) #14	PRELID2 (ENSNSUG00000010286) #15	ENSNSUG00000010282	ENSNSUG00000010281	KCTD16 (ENSNSUG00000010280) #17	YIPF5 (ENSNSUG00000010279) #18	NR3C1 (ENSNSUG00000010278) #22	ARHGAP26 (ENSNSUG00000010267) #23	FGF1 (ENSNSUG00000010265) #24	SPRY4 (ENSNSUG00000010261) #25	NDFIP1 (ENSNSUG00000010260) #26	GNPDA1 (ENSNSUG00000010259) #28	ENSNSUG00000010258 #29	HSPA4 (ENSNSUG00000008345)	ZCCHC10 (ENSNSUG00000008341)	AFF4 (ENSNSUG00000008322)	ENSNSUG00000008319	GDF9 (ENSNSUG00000008317)	ENSNSUG00000008315	ENSNSUG00000008314	SEPTIN8 (ENSNSUG00000006326)	CCNI2 (ENSNSUG00000006302)
Eastern brown snake	MODERN SPECIES	6	JAKMIP2 (ENSPTXG00000001086)	DPYSL3 (ENSPTXG00000001090)	STK32A (ENSPTXG00000001095)	PPP2R2B (ENSPTXG00000001144)	GPR151 (ENSPTXG00000001150) #7	TCERG1 (ENSPTXG00000001158) #8	POU4F3 (ENSPTXG00000001165) #9	RBM27 (ENSPTXG00000001170) #10	LARS1 (ENSPTXG00000001179) #11	PLAC8L1 (ENSPTXG00000001191) #12	SH3RF2 (ENSPTXG00000001195) #13	GRXCR2 (ENSPTXG00000001200) #14	PRELID2 (ENSPTXG00000001206) #15	KCTD16 (ENSPTXG00000001211) #17	YIPF5 (ENSPTXG00000001213) #18	NR3C1 (ENSPTXG00000001219) #22	ARHGAP26 (ENSPTXG00000001239) #23	FGF1 (ENSPTXG00000001324) #24	SPRY4 (ENSPTXG00000001326) #25	NDFIP1 (ENSPTXG00000001327) #26	GNPDA1 (ENSPTXG00000001329) #28	RNF14 (ENSPTXG00000001333) #29	HSPA4 (ENSPTXG00000001337)	ZCCHC10 (ENSPTXG00000001340)	AFF4 (ENSPTXG00000001343)	LEAP2 (ENSPTXG00000001346)	GDF9 (ENSPTXG00000001348)	ENSPTXG00000001359	ENSPTXG00000001363	SEPTIN8 (ENSPTXG00000001367)	CCNI2 (ENSPTXG00000001375)
Indian cobra	MODERN SPECIES	1	DPYSL3 (ENSNNAG00000013525)	STK32A (ENSNNAG00000013311)	ENSNNAG00000013291	PPP2R2B (ENSNNAG00000013207)	GPR151 (ENSNNAG00000013194) #7	TCERG1 (ENSNNAG00000013161) #8	POU4F3 (ENSNNAG00000013139) #9	RBM27 (ENSNNAG00000012950) #10	LARS1 (ENSNNAG00000012866) #11	PLAC8L1 (ENSNNAG00000012852) #12	SH3RF2 (ENSNNAG00000012812) #13	GRXCR2 (ENSNNAG00000012758) #14	PRELID2 (ENSNNAG00000012728) #15	ENSNNAG00000012706 #17	YIPF5 (ENSNNAG00000012686) #18	NR3C1 (ENSNNAG00000012655) #22	ARHGAP26 (ENSNNAG00000012582) #23	ENSNNAG00000012564 #23	FGF1 (ENSNNAG00000012539) #24	SPRY4 (ENSNNAG00000012525) #25	NDFIP1 (ENSNNAG00000012504) #26	GNPDA1 (ENSNNAG00000012487) #28	RNF14 (ENSNNAG00000012441) #29	HSPA4 (ENSNNAG00000012415)	ENSNNAG00000012396	AFF4 (ENSNNAG00000012346)	ENSNNAG00000012331	GDF9 (ENSNNAG00000012305)	ENSNNAG00000012277	SEPTIN8 (ENSNNAG00000011922)	ENSNNAG00000011893
Lizard	MODERN SPECIES	1	ENSACAG00000035116	ENSACAG00000038558	NKX2-5 (ENSACAG00000015142)	STC2 (ENSACAG00000044393)	ENSACAG00000043354	SUPT7L (ENSACAG00000009730)	SLC4A1AP (ENSACAG00000009669)	ENSACAG00000036914	ENSACAG00000037255	RBKS (ENSACAG00000009636)	ENSACAG00000039011	BABAM2 (ENSACAG00000009552)	ENSACAG00000044182	FOSL2 (ENSACAG00000009506)	ENSACAG00000009454	NR3C1 (ENSACAG00000013668) #22	ARHGAP26 (ENSACAG00000013456) #23	FGF1 (ENSACAG00000043127) #24	SPRY4 (ENSACAG00000013420) #25	NDFIP1 (ENSACAG00000013413) #26	GNPDA1 (ENSACAG00000013374) #28	RNF14 (ENSACAG00000013340) #29	HSPA4 (ENSACAG00000013092)	ENSACAG00000040566	ENSACAG00000013070	AFF4 (ENSACAG00000022605)	ENSACAG00000013046	ENSACAG00000041958	SEPTIN8 (ENSACAG00000012880)	ENSACAG00000035847	CCNI2 (ENSACAG00000029045)
tuatara	MODERN SPECIES	1296																NR3C1 (ENSSPUG00000012418) #22	ARHGAP26 (ENSSPUG00000012383) #23	FGF1 (ENSSPUG00000012364) #24	SPRY4 (ENSSPUG00000012353) #25	NDFIP1 (ENSSPUG00000012343) #26	GNPDA1 (ENSSPUG00000012336) #28	RNF14 (ENSSPUG00000012319) #29	HSPA4 (ENSSPUG00000012262)	ZCCHC10 (ENSSPUG00000012246)	AFF4 (ENSSPUG00000012215)	LEAP2 (ENSSPUG00000012201)	UQCRQ (ENSSPUG00000012191)	GDF9 (ENSSPUG00000012186)	SEPTIN8 (ENSSPUG00000012170)	CCNI2 (ENSSPUG00000012158)	KIF3A (ENSSPUG00000012135)
Archelosauria	ANCESTRAL SPECIES	15	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00960000189397	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Archosauria	ANCESTRAL SPECIES	17	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00960000189397	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Aves	ANCESTRAL SPECIES	15	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00960000189397	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
African ostrich	MODERN SPECIES	182		CDC23 (ENSSCUG00000002104)	JAKMIP2 (ENSSCUG00000002116)	DPYSL3 (ENSSCUG00000002126)	STK32A (ENSSCUG00000002128)	ENSSCUG00000002133	PPP2R2B (ENSSCUG00000002138)	ENSSCUG00000002154	RBM27 (ENSSCUG00000002180) #10	LARS1 (ENSSCUG00000002187) #11	PLAC8L1 (ENSSCUG00000002190) #12	SH3RF2 (ENSSCUG00000002191) #13	GRXCR2 (ENSSCUG00000002193) #14	KCTD16 (ENSSCUG00000002200) #17	YIPF5 (ENSSCUG00000002202) #18	NR3C1 (ENSSCUG00000002211) #22	ARHGAP26 (ENSSCUG00000002219) #23	ENSSCUG00000002235	NDFIP1 (ENSSCUG00000002238) #26	GNPDA1 (ENSSCUG00000002243) #28	RNF14 (ENSSCUG00000002246) #29	HSPA4 (ENSSCUG00000002258)	ZCCHC10 (ENSSCUG00000002270)	AFF4 (ENSSCUG00000002271)	LEAP2 (ENSSCUG00000002274)	GDF9 (ENSSCUG00000002275)	ENSSCUG00000002276	SEPTIN8 (ENSSCUG00000002282)	CCNI2 (ENSSCUG00000002286)	KIF3A (ENSSCUG00000002290)	ENSSCUG00000002294
Neognathae	ANCESTRAL SPECIES	14	ENSGT00950000182950.A	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00960000189397	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Neognathae_b	ANCESTRAL SPECIES	16	ENSGT00950000182950.A	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00960000189397	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Passeriformes	ANCESTRAL SPECIES	14	ENSGT00940000166081	ENSGT00940000161256	ENSGT00950000182950.A	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000159591	ENSGT00940000157139	ENSGT00940000157692
Great tit	MODERN SPECIES	4	ENSPMJG00000006089	GFRA3 (ENSPMJG00000006091)	CDC23 (ENSPMJG00000006093)	JAKMIP2 (ENSPMJG00000006097)	DPYSL3 (ENSPMJG00000006102)	STK32A (ENSPMJG00000006112)	PPP2R2B (ENSPMJG00000006119)	TCERG1 (ENSPMJG00000006127) #8	ENSPMJG00000006133	RBM27 (ENSPMJG00000006134) #10	LARS1 (ENSPMJG00000006220) #11	SH3RF2 (ENSPMJG00000006225) #13	GRXCR2 (ENSPMJG00000006226) #14	KCTD16 (ENSPMJG00000006234) #17	YIPF5 (ENSPMJG00000006237) #18	NR3C1 (ENSPMJG00000006249) #22	ARHGAP26 (ENSPMJG00000006253) #23	FGF1 (ENSPMJG00000006268) #24	SPRY4 (ENSPMJG00000006278) #25	NDFIP1 (ENSPMJG00000006281) #26	GNPDA1 (ENSPMJG00000006283) #28	RNF14 (ENSPMJG00000006287) #29	HSPA4 (ENSPMJG00000006292)	ZCCHC10 (ENSPMJG00000006296)	AFF4 (ENSPMJG00000006302)	LEAP2 (ENSPMJG00000006308)	UQCRQ (ENSPMJG00000006309)	GDF9 (ENSPMJG00000006310)	C1QTNF2 (ENSPMJG00000006311)	ENSPMJG00000006312	FABP6 (ENSPMJG00000006313)
Passeriformes_d	ANCESTRAL SPECIES	15	ENSGT00940000166081	ENSGT00940000161256	ENSGT00950000182950.A	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000159591	ENSGT00940000157139	ENSGT00940000157692
Passeriformes_g	ANCESTRAL SPECIES	15	ENSGT00940000166081	ENSGT00940000161256	ENSGT00950000182950.A	ENSGT00940000153713.B.d.e	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000159591	ENSGT00940000157139	ENSGT00940000157692
Medium ground finch	MODERN SPECIES	11	KDM3B (ENSGFOG00000012566)	ENSGFOG00000012560	GFRA3 (ENSGFOG00000012556)	CDC23 (ENSGFOG00000012527)	JAKMIP2 (ENSGFOG00000012513)	DPYSL3 (ENSGFOG00000012509)	STK32A (ENSGFOG00000012445)	PPP2R2B (ENSGFOG00000012431)	TCERG1 (ENSGFOG00000012423) #8	RBM27 (ENSGFOG00000012416) #10	LARS1 (ENSGFOG00000012398) #11	SH3RF2 (ENSGFOG00000012390) #13	KCTD16 (ENSGFOG00000012386) #17	YIPF5 (ENSGFOG00000012382) #18	ENSGFOG00000012377	NR3C1 (ENSGFOG00000012374) #22	ARHGAP26 (ENSGFOG00000011185) #23	FGF1 (ENSGFOG00000011129) #24	SPRY4 (ENSGFOG00000011125) #25	NDFIP1 (ENSGFOG00000011111) #26	GNPDA1 (ENSGFOG00000011095) #28	RNF14 (ENSGFOG00000011088) #29	HSPA4 (ENSGFOG00000010956)	ZCCHC10 (ENSGFOG00000010934)	AFF4 (ENSGFOG00000010926)	LEAP2 (ENSGFOG00000010917)	UQCRQ (ENSGFOG00000010914)	GDF9 (ENSGFOG00000010909)	C1QTNF2 (ENSGFOG00000010908)	FABP6 (ENSGFOG00000010902)	ENSGFOG00000010897
Passeroidea	ANCESTRAL SPECIES	15	ENSGT00940000166081	ENSGT00940000161256	ENSGT00950000182950.A	ENSGT00940000153713.B.d.e	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000159591	ENSGT00940000157139	ENSGT00940000157692
Zebra finch	MODERN SPECIES	4	ENSTGUG00000000037	ENSTGUG00000000040	DPYSL3 (ENSTGUG00000000047)	STK32A (ENSTGUG00000000062)	PPP2R2B (ENSTGUG00000000069)	TCERG1 (ENSTGUG00000000079) #8	POU4F3 (ENSTGUG00000024710) #9	RBM27 (ENSTGUG00000000085) #10	LARS1 (ENSTGUG00000000092) #11	SH3RF2 (ENSTGUG00000000122) #13	GRXCR2 (ENSTGUG00000023235) #14	ENSTGUG00000024945	ENSTGUG00000026582	KCTD16 (ENSTGUG00000000129) #17	YIPF5 (ENSTGUG00000000134) #18	NR3C1 (ENSTGUG00000000140) #22	ARHGAP26 (ENSTGUG00000000148) #23	FGF1 (ENSTGUG00000000158) #24	ENSTGUG00000021158	SPRY4 (ENSTGUG00000029319) #25	ENSTGUG00000028519	GNPDA1 (ENSTGUG00000000166) #28	RNF14 (ENSTGUG00000000171) #29	HSPA4 (ENSTGUG00000000176)	ZCCHC10 (ENSTGUG00000021247)	AFF4 (ENSTGUG00000000187)	LEAP2 (ENSTGUG00000000192)	UQCRQ (ENSTGUG00000000193)	GDF9 (ENSTGUG00000000194)	C1QTNF2 (ENSTGUG00000000195)	FABP6 (ENSTGUG00000000197)
Common canary	MODERN SPECIES	16	EGR1 (ENSSCAG00000002929)	REEP2 (ENSSCAG00000002925)	KDM3B (ENSSCAG00000002915)	CDC23 (ENSSCAG00000002907)	JAKMIP2 (ENSSCAG00000002894)	DPYSL3 (ENSSCAG00000002340)	STK32A (ENSSCAG00000002196)	PPP2R2B (ENSSCAG00000002181)	TCERG1 (ENSSCAG00000002030) #8	RBM27 (ENSSCAG00000002005) #10	LARS1 (ENSSCAG00000001997) #11	SH3RF2 (ENSSCAG00000001989) #13	GRXCR2 (ENSSCAG00000001985) #14	KCTD16 (ENSSCAG00000001982) #17	YIPF5 (ENSSCAG00000001957) #18	NR3C1 (ENSSCAG00000001943) #22	ARHGAP26 (ENSSCAG00000001740) #23	FGF1 (ENSSCAG00000001687) #24	SPRY4 (ENSSCAG00000001683) #25	ENSSCAG00000001678	NDFIP1 (ENSSCAG00000001675) #26	GNPDA1 (ENSSCAG00000001670) #28	RNF14 (ENSSCAG00000001663) #29	HSPA4 (ENSSCAG00000001655)	ZCCHC10 (ENSSCAG00000001651)	AFF4 (ENSSCAG00000001639)	LEAP2 (ENSSCAG00000001633)	UQCRQ (ENSSCAG00000001631)	GDF9 (ENSSCAG00000001629)	C1QTNF2 (ENSSCAG00000001626)	FABP6 (ENSSCAG00000001624)
Flycatcher	MODERN SPECIES	4													ENSFALG00000024254	KCTD16 (ENSFALG00000008962) #17	YIPF5 (ENSFALG00000008960) #18	NR3C1 (ENSFALG00000008958) #22	ARHGAP26 (ENSFALG00000008956) #23	ENSFALG00000027108	ENSFALG00000027468	FGF1 (ENSFALG00000023468) #24	SPRY4 (ENSFALG00000014442) #25	NDFIP1 (ENSFALG00000008949) #26	GNPDA1 (ENSFALG00000026643) #28	RNF14 (ENSFALG00000008942) #29	HSPA4 (ENSFALG00000008937)	ZCCHC10 (ENSFALG00000008933)	AFF4 (ENSFALG00000008916)	ENSFALG00000008912	UQCRQ (ENSFALG00000008909)	GDF9 (ENSFALG00000022963)	C1QTNF2 (ENSFALG00000008905)
Neognathae_c	ANCESTRAL SPECIES	19	ENSGT00950000182950.A	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00960000189397	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Golden eagle	MODERN SPECIES	14	GFRA3 (ENSACCG00020014732)	CDC23 (ENSACCG00020014709)	JAKMIP2 (ENSACCG00020014675)	DPYSL3 (ENSACCG00020014610)	STK32A (ENSACCG00020014583)	PPP2R2B (ENSACCG00020014547)	TCERG1 (ENSACCG00020014501) #8	POU4F3 (ENSACCG00020014472) #9	RBM27 (ENSACCG00020014416) #10	LARS1 (ENSACCG00020014331) #11	SH3RF2 (ENSACCG00020014303) #13	GRXCR2 (ENSACCG00020014284) #14	PRELID2 (ENSACCG00020014265) #15	KCTD16 (ENSACCG00020014252) #17	YIPF5 (ENSACCG00020014229) #18	NR3C1 (ENSACCG00020014204) #22	ARHGAP26 (ENSACCG00020014129) #23	FGF1 (ENSACCG00020014084) #24	SPRY4 (ENSACCG00020014075) #25	NDFIP1 (ENSACCG00020014064) #26	GNPDA1 (ENSACCG00020014051) #28	RNF14 (ENSACCG00020014027) #29	HSPA4 (ENSACCG00020013986)	ZCCHC10 (ENSACCG00020013952)	AFF4 (ENSACCG00020013926)	LEAP2 (ENSACCG00020013901)	UQCRQ (ENSACCG00020013890)	GDF9 (ENSACCG00020013877)	ENSACCG00020013860	SEPTIN8 (ENSACCG00020013837)	CCNI2 (ENSACCG00020013805)
Kakapo	MODERN SPECIES	6	GFRA3 (ENSSHBG00005016699)	CDC23 (ENSSHBG00005016704)	JAKMIP2 (ENSSHBG00005016719)	DPYSL3 (ENSSHBG00005016732)	STK32A (ENSSHBG00005016739)	ENSSHBG00005016747	PPP2R2B (ENSSHBG00005016757)	TCERG1 (ENSSHBG00005016771) #8	POU4F3 (ENSSHBG00005016782) #9	RBM27 (ENSSHBG00005016802) #10	LARS1 (ENSSHBG00005016824) #11	SH3RF2 (ENSSHBG00005016833) #13	GRXCR2 (ENSSHBG00005016839) #14	KCTD16 (ENSSHBG00005016843) #17	YIPF5 (ENSSHBG00005016851) #18	NR3C1 (ENSSHBG00005016857) #22	ARHGAP26 (ENSSHBG00005016872) #23	FGF1 (ENSSHBG00005016881) #24	SPRY4 (ENSSHBG00005016889) #25	NDFIP1 (ENSSHBG00005016895) #26	GNPDA1 (ENSSHBG00005016903) #28	RNF14 (ENSSHBG00005016911) #29	HSPA4 (ENSSHBG00005016917)	ZCCHC10 (ENSSHBG00005005326)	ENSSHBG00005005338	ENSSHBG00005005356	UQCRQ (ENSSHBG00005005393)	LEAP2 (ENSSHBG00005005414)	GDF9 (ENSSHBG00005005427)	ENSSHBG00005005441	SOWAHA (ENSSHBG00005005463)
Galloanserae	ANCESTRAL SPECIES	14	ENSGT00950000182950.A	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00960000189397	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Anatidae	ANCESTRAL SPECIES	15	ENSGT00940000161256	ENSGT00950000182950.A	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Duck	MODERN SPECIES	5	GFRA3 (ENSAPLG00000012646)	CDC23 (ENSAPLG00000012078)	JAKMIP2 (ENSAPLG00000011443)	DPYSL3 (ENSAPLG00000010132)	STK32A (ENSAPLG00000009674)	PPP2R2B (ENSAPLG00000009636)	TCERG1 (ENSAPLG00000009432) #8	RBM27 (ENSAPLG00000009309) #10	LARS1 (ENSAPLG00000008145) #11	ENSAPLG00000018144	ENSAPLG00000027135 #13	GRXCR2 (ENSAPLG00000026893) #14	PRELID2 (ENSAPLG00000007685) #15	KCTD16 (ENSAPLG00000018353) #17	YIPF5 (ENSAPLG00000007623) #18	NR3C1 (ENSAPLG00000007318) #22	ARHGAP26 (ENSAPLG00000006831) #23	FGF1 (ENSAPLG00000006784) #24	SPRY4 (ENSAPLG00000001658) #25	NDFIP1 (ENSAPLG00000004156) #26	GNPDA1 (ENSAPLG00000004003) #28	RNF14 (ENSAPLG00000003900) #29	HSPA4 (ENSAPLG00000002687)	ZCCHC10 (ENSAPLG00000002623)	LEAP2 (ENSAPLG00000011235)	AFF4 (ENSAPLG00000011166)	GDF9 (ENSAPLG00000011242)	ENSAPLG00000018974	SOWAHA (ENSAPLG00000021650)	SEPTIN8 (ENSAPLG00000011252)	CCNI2 (ENSAPLG00000011517)
Pink-footed goose	MODERN SPECIES	9	GFRA3 (ENSABRG00000016892)	CDC23 (ENSABRG00000016884)	JAKMIP2 (ENSABRG00000016847)	DPYSL3 (ENSABRG00000016827)	STK32A (ENSABRG00000016811)	PPP2R2B (ENSABRG00000016796)	TCERG1 (ENSABRG00000016542) #8	POU4F3 (ENSABRG00000016484) #9	RBM27 (ENSABRG00000016473) #10	LARS1 (ENSABRG00000016441) #11	SH3RF2 (ENSABRG00000016435) #13	GRXCR2 (ENSABRG00000016433) #14	PRELID2 (ENSABRG00000016427) #15	KCTD16 (ENSABRG00000016415) #17	YIPF5 (ENSABRG00000016411) #18	NR3C1 (ENSABRG00000016405) #22	ARHGAP26 (ENSABRG00000016387) #23	FGF1 (ENSABRG00000016381) #24	SPRY4 (ENSABRG00000016376) #25	NDFIP1 (ENSABRG00000016372) #26	GNPDA1 (ENSABRG00000016368) #28	RNF14 (ENSABRG00000016367) #29	HSPA4 (ENSABRG00000016359)	ENSABRG00000016355	AFF4 (ENSABRG00000016343)	LEAP2 (ENSABRG00000016336)	UQCRQ (ENSABRG00000016335)	GDF9 (ENSABRG00000016331)	ENSABRG00000016326	SOWAHA (ENSABRG00000016319)	ENSABRG00000016309
Phasianidae	ANCESTRAL SPECIES	14	ENSGT00940000161256	ENSGT00950000182950.A	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00960000189397	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Japanese quail	MODERN SPECIES	4	GFRA3 (ENSCJPG00005020869)	CDC23 (ENSCJPG00005020870)	JAKMIP2 (ENSCJPG00005020871)	DPYSL3 (ENSCJPG00005020872)	STK32A (ENSCJPG00005020881)	ENSCJPG00005020882	PPP2R2B (ENSCJPG00005020883)	TCERG1 (ENSCJPG00005020884) #8	POU4F3 (ENSCJPG00005020885) #9	RBM27 (ENSCJPG00005020886) #10	LARS1 (ENSCJPG00005020887) #11	SH3RF2 (ENSCJPG00005020888) #13	GRXCR2 (ENSCJPG00005020889) #14	KCTD16 (ENSCJPG00005020892) #17	YIPF5 (ENSCJPG00005020893) #18	NR3C1 (ENSCJPG00005020895) #22	ARHGAP26 (ENSCJPG00005020896) #23	FGF1 (ENSCJPG00005020897) #24	SPRY4 (ENSCJPG00005020899) #25	NDFIP1 (ENSCJPG00005020900) #26	GNPDA1 (ENSCJPG00005020901) #28	RNF14 (ENSCJPG00005020902) #29	HSPA4 (ENSCJPG00005020903)	ZCCHC10 (ENSCJPG00005020904)	ENSCJPG00005020905	SOWAHA (ENSCJPG00005020906)	SEPTIN8 (ENSCJPG00005020911)	CCNI2 (ENSCJPG00005020976)	KIF3A (ENSCJPG00005020977)	IL4 (ENSCJPG00005020978)	ENSCJPG00005020979
Phasianidae_b	ANCESTRAL SPECIES	18	ENSGT00940000166081	ENSGT00940000161256	ENSGT00950000182950.A	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557.a #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Turkey	DUPLICATION
Turkey	MODERN SPECIES	6	ENSMGAG00000009075	ENSMGAG00000009138	UQCRQ (ENSMGAG00000009135)	ENSMGAG00000009121	ENSMGAG00000008958	ENSMGAG00000020532	ENSMGAG00000009184	ENSMGAG00000009266 #28	ENSMGAG00000009253 #29	NDFIP1 (ENSMGAG00000009275) #26	ENSMGAG00000009144	ENSMGAG00000020424 #24	ENSMGAG00000015458 #24	ENSMGAG00000021682 #23	ENSMGAG00000009299 #23	ENSMGAG00000009322 #22	ENSMGAG00000020001 #22	ENSMGAG00000009360 #18	ENSMGAG00000009371 #17	ENSMGAG00000009376 #13	ENSMGAG00000021424	ENSMGAG00000009388 #11	ENSMGAG00000009467 #10	ENSMGAG00000009486 #8	PPP2R2B (ENSMGAG00000009518)	ENSMGAG00000021487	ENSMGAG00000009560	ENSMGAG00000009538	ENSMGAG00000018759	JAKMIP2 (ENSMGAG00000009648)	ENSMGAG00000009684
Turkey	MODERN SPECIES	6	ENSMGAG00000009138	UQCRQ (ENSMGAG00000009135)	ENSMGAG00000009121	ENSMGAG00000008958	ENSMGAG00000020532	ENSMGAG00000009184	ENSMGAG00000009266 #28	ENSMGAG00000009253 #29	NDFIP1 (ENSMGAG00000009275) #26	ENSMGAG00000009144	ENSMGAG00000020424 #24	ENSMGAG00000015458 #24	ENSMGAG00000021682 #23	ENSMGAG00000009299 #23	ENSMGAG00000009322 #22	ENSMGAG00000020001 #22	ENSMGAG00000009360 #18	ENSMGAG00000009371 #17	ENSMGAG00000009376 #13	ENSMGAG00000021424	ENSMGAG00000009388 #11	ENSMGAG00000009467 #10	ENSMGAG00000009486 #8	PPP2R2B (ENSMGAG00000009518)	ENSMGAG00000021487	ENSMGAG00000009560	ENSMGAG00000009538	ENSMGAG00000018759	JAKMIP2 (ENSMGAG00000009648)	ENSMGAG00000009684	ENSMGAG00000018637
Chicken	MODERN SPECIES	4	CTBPL (ENSGALG00010014179)	GFRA3 (ENSGALG00010014161)	CDC23 (ENSGALG00010014131)	JAKMIP2 (ENSGALG00010014096)	DPYSL3 (ENSGALG00010014018)	STK32A (ENSGALG00010013959)	PPP2R2B (ENSGALG00010013921)	TCERG1 (ENSGALG00010013831) #8	POU4F3 (ENSGALG00010012802) #9	RBM27 (ENSGALG00010016455) #10	LARS1 (ENSGALG00010016629) #11	SH3RF2 (ENSGALG00010016627) #13	GRXCR2 (ENSGALG00010016621) #14	KCTD16 (ENSGALG00010016505) #17	YIPF5 (ENSGALG00010016502) #18	NR3C1 (ENSGALG00010016758) #22	ARHGAP26 (ENSGALG00010016732) #23	FGF1 (ENSGALG00010013399) #24	SPRY4 (ENSGALG00010013372) #25	NDFIP1 (ENSGALG00010013353) #26	GNPDA1 (ENSGALG00010013300) #28	RNF14 (ENSGALG00010013286) #29	HSPA4 (ENSGALG00010013805)	ZCCHC10 (ENSGALG00010013787)	AFF4 (ENSGALG00010013737)	LEAP2 (ENSGALG00010013704)	UQCRQ (ENSGALG00010013686)	GDF9 (ENSGALG00010013676)	ENSGALG00010013672	SOWAHA (ENSGALG00010013667)	SEPTIN8 (ENSGALG00010016402)
Australian saltwater crocodile	MODERN SPECIES	34	SFXN1 (ENSCPRG00005007987)	JAKMIP2 (ENSCPRG00005008002)	DPYSL3 (ENSCPRG00005008055)	STK32A (ENSCPRG00005008085)	PPP2R2B (ENSCPRG00005008119)	TCERG1 (ENSCPRG00005008131) #8	POU4F3 (ENSCPRG00005008153) #9	RBM27 (ENSCPRG00005008156) #10	LARS1 (ENSCPRG00005008167) #11	PLAC8L1 (ENSCPRG00005008208) #12	SH3RF2 (ENSCPRG00005008214) #13	GRXCR2 (ENSCPRG00005008246) #14	PRELID2 (ENSCPRG00005008250) #15	KCTD16 (ENSCPRG00005008265) #17	YIPF5 (ENSCPRG00005008278) #18	NR3C1 (ENSCPRG00005008298) #22	ARHGAP26 (ENSCPRG00005008337) #23	FGF1 (ENSCPRG00005008365) #24	SPRY4 (ENSCPRG00005008382) #25	NDFIP1 (ENSCPRG00005008386) #26	GNPDA1 (ENSCPRG00005008400) #28	RNF14 (ENSCPRG00005008410) #29	HSPA4 (ENSCPRG00005008425)	ZCCHC10 (ENSCPRG00005008454)	AFF4 (ENSCPRG00005008462)	LEAP2 (ENSCPRG00005008479)	ENSCPRG00005008482	GDF9 (ENSCPRG00005008485)	ENSCPRG00005008491	SEPTIN8 (ENSCPRG00005008502)	CCNI2 (ENSCPRG00005008513)
Cryptodira	ANCESTRAL SPECIES	15	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00960000189397	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Testudinoidea	ANCESTRAL SPECIES	5	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00960000189397	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Emydidae	ANCESTRAL SPECIES	11	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00960000189397	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
painted turtle	MODERN SPECIES	761	ATP13A5 (ENSCPBG00000016903)	ATP13A4 (ENSCPBG00000016883)	OPA1 (ENSCPBG00000016865)	RNF144B (ENSCPBG00000016853)	DEK (ENSCPBG00000016760)	KDM1B (ENSCPBG00000016750)	TPMT (ENSCPBG00000016749)	NHLRC1 (ENSCPBG00000016748)	KIF13A (ENSCPBG00000016736)	SIRT5 (ENSCPBG00000016733)	NOL7 (ENSCPBG00000016731)	RANBP9 (ENSCPBG00000016684)	MCUR1 (ENSCPBG00000016640)	KCTD16 (ENSCPBG00000016637) #17	YIPF5 (ENSCPBG00000016635) #18	NR3C1 (ENSCPBG00000016629) #22	ARHGAP26 (ENSCPBG00000016598) #23	FGF1 (ENSCPBG00000016580) #24	SPRY4 (ENSCPBG00000016578) #25	NDFIP1 (ENSCPBG00000016575) #26	GNPDA1 (ENSCPBG00000016567) #28	RNF14 (ENSCPBG00000016562) #29	HSPA4 (ENSCPBG00000016557)	ZCCHC10 (ENSCPBG00000016553)	ENSCPBG00000016549	ENSCPBG00000016541	LEAP2 (ENSCPBG00000016520)	UQCRQ (ENSCPBG00000016516)	GDF9 (ENSCPBG00000016514)	ENSCPBG00000016512	SEPTIN8 (ENSCPBG00000016503)
Three-toed box turtle	MODERN SPECIES	306	DPYSL3 (ENSTMTG00000016524)	STK32A (ENSTMTG00000016542)	ENSTMTG00000016562	PPP2R2B (ENSTMTG00000016580)	GPR151 (ENSTMTG00000016627) #7	TCERG1 (ENSTMTG00000016641) #8	POU4F3 (ENSTMTG00000016791) #9	RBM27 (ENSTMTG00000016799) #10	LARS1 (ENSTMTG00000016817) #11	PLAC8L1 (ENSTMTG00000016879) #12	SH3RF2 (ENSTMTG00000016918) #13	GRXCR2 (ENSTMTG00000016953) #14	PRELID2 (ENSTMTG00000016972) #15	KCTD16 (ENSTMTG00000016998) #17	YIPF5 (ENSTMTG00000017013) #18	NR3C1 (ENSTMTG00000017032) #22	ARHGAP26 (ENSTMTG00000017093) #23	FGF1 (ENSTMTG00000017562) #24	SPRY4 (ENSTMTG00000017587) #25	NDFIP1 (ENSTMTG00000017594) #26	GNPDA1 (ENSTMTG00000017607) #28	RNF14 (ENSTMTG00000017619) #29	HSPA4 (ENSTMTG00000017638)	ENSTMTG00000017685	AFF4 (ENSTMTG00000017703)	LEAP2 (ENSTMTG00000017743)	UQCRQ (ENSTMTG00000014720)	GDF9 (ENSTMTG00000014729)	ENSTMTG00000014735	SOWAHA (ENSTMTG00000014745)	SEPTIN8 (ENSTMTG00000014763)
Testudinidae	ANCESTRAL SPECIES	16	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00960000189397	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000013467	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Abingdon island giant tortoise	MODERN SPECIES	2691																NR3C1 (ENSCABG00000010099) #22	ARHGAP26 (ENSCABG00000010102) #23	FGF1 (ENSCABG00000010142) #24	SPRY4 (ENSCABG00000010144) #25	NDFIP1 (ENSCABG00000010145) #26	GNPDA1 (ENSCABG00000010146) #28	RNF14 (ENSCABG00000010151) #29	HSPA4 (ENSCABG00000010166)	ZCCHC10 (ENSCABG00000010169)	AFF4 (ENSCABG00000010174)	LEAP2 (ENSCABG00000010227)	UQCRQ (ENSCABG00000010228)	GDF9 (ENSCABG00000010229)	ENSCABG00000010230	ENSCABG00000010231	SEPTIN8 (ENSCABG00000010233)
Goode s thornscrub tortoise	MODERN SPECIES	22	DPYSL3 (ENSGEVG00005008376)	STK32A (ENSGEVG00005008055)	ENSGEVG00005007956	PPP2R2B (ENSGEVG00005007863)	GPR151 (ENSGEVG00005007825) #7	TCERG1 (ENSGEVG00005007732) #8	POU4F3 (ENSGEVG00005007692) #9	RBM27 (ENSGEVG00005007644) #10	LARS1 (ENSGEVG00005007516) #11	PLAC8L1 (ENSGEVG00005007478) #12	SH3RF2 (ENSGEVG00005007423) #13	GRXCR2 (ENSGEVG00005007398) #14	PRELID2 (ENSGEVG00005007378) #15	KCTD16 (ENSGEVG00005007343) #17	YIPF5 (ENSGEVG00005011652) #18	NR3C1 (ENSGEVG00005011630) #22	ARHGAP26 (ENSGEVG00005010458) #23	FGF1 (ENSGEVG00005010339) #24	SPRY4 (ENSGEVG00005010321) #25	NDFIP1 (ENSGEVG00005010296) #26	GNPDA1 (ENSGEVG00005010284) #28	RNF14 (ENSGEVG00005010252) #29	HSPA4 (ENSGEVG00005010204)	ZCCHC10 (ENSGEVG00005010176)	AFF4 (ENSGEVG00005010126)	LEAP2 (ENSGEVG00005010095)	UQCRQ (ENSGEVG00005010077)	GDF9 (ENSGEVG00005010023)	ENSGEVG00005009956	SOWAHA (ENSGEVG00005009935)	SEPTIN8 (ENSGEVG00005009791)
Chinese turtle	MODERN SPECIES	1469			PPP2R2B (ENSPSIG00000016108)	GPR151 (ENSPSIG00000002034) #7	TCERG1 (ENSPSIG00000016100) #8	POU4F3 (ENSPSIG00000016096) #9	RBM27 (ENSPSIG00000016084) #10	LARS1 (ENSPSIG00000015641) #11	PLAC8L1 (ENSPSIG00000015635) #12	SH3RF2 (ENSPSIG00000015585) #13	GRXCR2 (ENSPSIG00000015577) #14	PRELID2 (ENSPSIG00000015571) #15	ENSPSIG00000002033	KCTD16 (ENSPSIG00000015569) #17	YIPF5 (ENSPSIG00000015511) #18	NR3C1 (ENSPSIG00000015245) #22	ARHGAP26 (ENSPSIG00000014722) #23	ENSPSIG00000002032	FGF1 (ENSPSIG00000014555) #24	SPRY4 (ENSPSIG00000014328) #25	NDFIP1 (ENSPSIG00000014277) #26	GNPDA1 (ENSPSIG00000014040) #28	RNF14 (ENSPSIG00000013973) #29	HSPA4 (ENSPSIG00000013077)	ZCCHC10 (ENSPSIG00000013016)	AFF4 (ENSPSIG00000013003)	UQCRQ (ENSPSIG00000012883)	GDF9 (ENSPSIG00000012848)	ENSPSIG00000012735	SEPTIN8 (ENSPSIG00000012411)	CCNI2 (ENSPSIG00000012295)
Anura	ANCESTRAL SPECIES	123	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b #7	ENSGT00940000157770 #8	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23
Frog	MODERN SPECIES	3	ppp2r2b (ENSXETG00000020864)	ENSXETG00000046970	GPR151 (ENSXETG00000002325) #7	pou4f3 (ENSXETG00000041097) #9	ENSXETG00000045329	rbm27 (ENSXETG00000002324) #8	lars1 (ENSXETG00000002320) #11	sh3rf2 (ENSXETG00000002319) #13	grxcr2 (ENSXETG00000032005) #14	ENSXETG00000043029	prelid2 (ENSXETG00000027124) #15	ENSXETG00000046225	ENSXETG00000047589	kctd16 (ENSXETG00000030030) #17	yipf5 (ENSXETG00000005469) #18	nr3c1 (ENSXETG00000042129) #22	ENSXETG00000047801	ENSXETG00000041993	ENSXETG00000047964	arhgap26 (ENSXETG00000001880) #23	il4 (ENSXETG00000032602)	kif3a (ENSXETG00000004164)	ccni2 (ENSXETG00000034722)	septin8 (ENSXETG00000030617)	ENSXETG00000046198	shroom1 (ENSXETG00000004167)	sowaha (ENSXETG00000004166)	ENSXETG00000049106	gdf9 (ENSXETG00000004168)	uqcrq (ENSXETG00000027128)	ENSXETG00000048896
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000005354	TCERG1 (ENSLLEG00000005054) #8	POU4F3 (ENSLLEG00000029017) #9	RBM27 (ENSLLEG00000028920) #10	LARS1 (ENSLLEG00000028616) #11	GRXCR2 (ENSLLEG00000028530) #14	SH3RF2 (ENSLLEG00000028478) #13	PRELID2 (ENSLLEG00000028366) #15	ENSLLEG00000028270	ENSLLEG00000028260	KCTD16 (ENSLLEG00000028239) #17	YIPF5 (ENSLLEG00000028172) #18	ENSLLEG00000028155	ENSLLEG00000028137	ENSLLEG00000028127	NR3C1 (ENSLLEG00000028062) #22	ENSLLEG00000027998	ENSLLEG00000027968	ENSLLEG00000027950	ARHGAP26 (ENSLLEG00000027080) #23	ENSLLEG00000026966	UQCRQ (ENSLLEG00000026932)	AFF4 (ENSLLEG00000026639)	ZCCHC10 (ENSLLEG00000026584)	FGF1 (ENSLLEG00000026504) #24	ENSLLEG00000026476	SPRY4 (ENSLLEG00000026447) #25	ENSLLEG00000026406	NDFIP1 (ENSLLEG00000026180) #26	ENSLLEG00000026010 #28	ENSLLEG00000025992
Coelacanth	MODERN SPECIES	517				PPP2R2B (ENSLACG00000003495)	GPR151 (ENSLACG00000006489) #7	TCERG1 (ENSLACG00000006620) #8	POU4F3 (ENSLACG00000008349) #9	RBM27 (ENSLACG00000008729) #10	LARS1 (ENSLACG00000009321) #11	PLAC8L1 (ENSLACG00000009961) #12	SH3RF2 (ENSLACG00000010265) #13	GRXCR2 (ENSLACG00000010993) #14	ENSLACG00000014368 #17	ENSLACG00000015047 #17	YIPF5 (ENSLACG00000015152) #18	NR3C1 (ENSLACG00000015535) #22	ARHGAP26 (ENSLACG00000016139) #23
Actinopterygii	ANCESTRAL SPECIES	34	ENSGT00940000163251.a	ENSGT00940000154155	ENSGT00940000159536	ENSGT00940000157695	ENSGT00390000018781	ENSGT00940000156386	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000160067 #13	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00530000063825.A.d	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068
Neopterygii	ANCESTRAL SPECIES	24	ENSGT00940000167667	ENSGT00940000163251.a.a	ENSGT00940000163251.a.b.a	ENSGT00940000159536	ENSGT00940000157695	ENSGT00390000018781	ENSGT00940000156386	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00950000182810.A.b #15	ENSGT00940000156071 #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385 #22	ENSGT00940000157254 #23	ENSGT00940000160557 #24	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00530000063825.A.d	ENSGT00390000014316.c.b #28	ENSGT00940000154507 #29	ENSGT00940000156067	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068.i
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000156385.a #22
Osteoglossiformes	ANCESTRAL SPECIES	23	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.a.a	ENSGT00940000154998.a.a.t	ENSGT00390000000483.a.a.f	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000156386.d	ENSGT00940000160880.c #9	ENSGT00510000046929.b.h #10	ENSGT00390000012163 #11	ENSGT00940000160067 #13	ENSGT00950000182810.A.b #15	ENSGT00940000156071.a #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.a #22	ENSGT00940000157254.o #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b.b #25	ENSGT00390000012721.a #26	ENSGT00530000063825.A.d	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.a	ENSGT00950000182974.a.a.b.j	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656.d	ENSGT00950000183003.a.a.a.a.b.e	ENSGT00940000156068.j	ENSGT00940000162679.c	ENSGT00940000154726
Asian bonytongue	MODERN SPECIES	4	CREBRF (ENSSFOG00015017854)	BNIP1 (ENSSFOG00015026362)	nkx2.5 (ENSSFOG00015017890)	STC2 (ENSSFOG00015017907)	CPEB4 (ENSSFOG00015017925)	NSG2 (ENSSFOG00015017958)	MSX2 (ENSSFOG00015025283)	DRD1 (ENSSFOG00015017983)	pou4f3 (ENSSFOG00015017993) #9	RBM27 (ENSSFOG00015018009) #10	LARS1 (ENSSFOG00015018117) #11	SH3RF2 (ENSSFOG00015018215) #13	PRELID2 (ENSSFOG00015018273) #15	kctd16a (ENSSFOG00015018302) #17	yipf5 (ENSSFOG00015031270) #18	nr3c1 (ENSSFOG00015018348) #22	ARHGAP26 (ENSSFOG00015018403) #23	ENSSFOG00015018500	spry4 (ENSSFOG00015018544) #25	ndfip1 (ENSSFOG00015025334) #26	endou2 (ENSSFOG00015018551)	gnpda1 (ENSSFOG00015018565) #28	HSPA4 (ENSSFOG00015018589)	AFF4 (ENSSFOG00015018646)	uqcrq (ENSSFOG00015027428)	gdf9 (ENSSFOG00015018741)	ENSSFOG00015018754	ENSSFOG00015026126	septin8b (ENSSFOG00015018786)	CCNI2 (ENSSFOG00015018827)	ccng1 (ENSSFOG00015024879)
P. kingsleyae	MODERN SPECIES	442														kctd16a (ENSPKIG00000024111) #17	yipf5 (ENSPKIG00000024119) #18	NR3C1 (ENSPKIG00000024131) #22	ARHGAP26 (ENSPKIG00000024147) #23	fgf1b (ENSPKIG00000024173)	spry4 (ENSPKIG00000024184) #25	ndfip1l (ENSPKIG00000024194) #26	endou2 (ENSPKIG00000024238)	gnpda1 (ENSPKIG00000024252) #28	HSPA4 (ENSPKIG00000024274)	AFF4 (ENSPKIG00000024325)	uqcrq (ENSPKIG00000024365)	gdf9 (ENSPKIG00000024372)	ENSPKIG00000024384	SOWAHA (ENSPKIG00000024393)	septin8b (ENSPKIG00000024403)	CCNI2 (ENSPKIG00000024425)	ccng1 (ENSPKIG00000024439)
Clupeocephala	ANCESTRAL SPECIES	291													ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00940000172088	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491	ENSGT00940000159568
Otomorpha	ANCESTRAL SPECIES	259						ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.b	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000159568	ENSGT00940000159491	ENSGT00940000159531	ENSGT00940000154245.A.jb.b	ENSGT00940000156722.b	ENSGT00390000001644	ENSGT00940000154726	ENSGT00940000156068.j	ENSGT01030000234641.b.a.b.a.b
Clupeiformes	ANCESTRAL SPECIES	222							ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.b	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000159568	ENSGT00940000159491	ENSGT00940000159531	ENSGT00940000154245.A.jb.b	ENSGT00940000156722.b	ENSGT00390000001644	ENSGT00940000154726	ENSGT00940000156068.j	ENSGT01030000234641.b.a.b.a.b
Atlantic herring	MODERN SPECIES	12	ENSCHAG00000022704	ENSCHAG00000022699	ENSCHAG00000022688	pola2 (ENSCHAG00000022279)	dpf2l (ENSCHAG00000022183)	ENSCHAG00000022166	BNIP1 (ENSCHAG00000022159)	nkx2.5 (ENSCHAG00000022155)	STC2 (ENSCHAG00000022150)	cpeb4a (ENSCHAG00000021905)	msx2a (ENSCHAG00000021897)	ENSCHAG00000021879	DRD1 (ENSCHAG00000021860)	kif3a (ENSCHAG00000021430)	kctd16a (ENSCHAG00000021424) #17	nr3c1 (ENSCHAG00000021359) #22	fgf1a (ENSCHAG00000021169)	hspa4b (ENSCHAG00000015977)	uqcrq (ENSCHAG00000015813)	gdf9 (ENSCHAG00000015806)	ENSCHAG00000015793	atp7a (ENSCHAG00000012463)	ENSCHAG00000012405	ENSCHAG00000012297	gabrb2a (ENSCHAG00000012066)	ENSCHAG00000012048	ENSCHAG00000012027	WDR1 (ENSCHAG00000011964)	ENSCHAG00000011572	rnf20 (ENSCHAG00000010471)	ENSCHAG00000010434
Denticle herring	MODERN SPECIES	9	adrb2a (ENSDCDG00000022121)	ENSDCDG00000022127	ENSDCDG00000022140	ENSDCDG00000022142	ENSDCDG00000022145	WNT8A (ENSDCDG00000022148)	BNIP1 (ENSDCDG00000022176)	nkx2.5 (ENSDCDG00000022178)	STC2 (ENSDCDG00000022179)	cpeb4a (ENSDCDG00000022186)	msx2a (ENSDCDG00000022191)	DRD1 (ENSDCDG00000022194)	kif3a (ENSDCDG00000022217)	ENSDCDG00000022817 #13	kctd16a (ENSDCDG00000022819) #17	nr3c1 (ENSDCDG00000022825) #22	fgf1a (ENSDCDG00000022828)	gnpda1 (ENSDCDG00000022832) #28	hspa4b (ENSDCDG00000022882)	uqcrq (ENSDCDG00000023405)	ENSDCDG00000023407	atp7a (ENSDCDG00000023427)	ENSDCDG00000025781	ATP10B (ENSDCDG00000025857)	gabrb2a (ENSDCDG00000025943)	gabra6a (ENSDCDG00000025980)	nudcd2 (ENSDCDG00000025985)	ccng1 (ENSDCDG00000025989)	septin8b (ENSDCDG00000026013)	sfxn1 (ENSDCDG00000027201)	ppp2caa (ENSDCDG00000027230)
Otophysi	ANCESTRAL SPECIES	258						ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.b	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000156386	ENSGT00940000155875	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00550000075136	ENSGT00440000037505.b	ENSGT00940000155470.a	ENSGT00390000006788.a.a	ENSGT00940000154894.a	ENSGT00940000165596.d	ENSGT00940000160491.d.b	ENSGT00510000047420	ENSGT00940000160376	ENSGT00390000017869
Characiphysae	ANCESTRAL SPECIES	86	ENSGT00940000178677	ENSGT00950000183177.a.a.a.a.g	ENSGT00940000164356.b	ENSGT00940000164356.a	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.b	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000156386	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00550000075136	ENSGT00440000037505.b	ENSGT00940000155470.a	ENSGT00390000006788.a.a	ENSGT00940000154894.a	ENSGT00940000165596.d	ENSGT00940000160491.d.b	ENSGT00510000047420	ENSGT00940000160376	ENSGT00390000017869	ENSGT00940000153596.A	ENSGT00940000164078.a.a
Characiphysae_b	ANCESTRAL SPECIES	32	ENSGT00940000178677	ENSGT00950000183177.a.a.a.a.g	ENSGT00940000164356.b	ENSGT00940000164356.a	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.b	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000156386	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00550000075136	ENSGT00440000037505.b	ENSGT00940000155470.a	ENSGT00390000006788.a.a	ENSGT00940000154894.a	ENSGT00940000165596.d	ENSGT00940000160491.d.b	ENSGT00510000047420	ENSGT00940000160376	ENSGT00390000017869	ENSGT00940000153596.A	ENSGT00940000164078.a.a
Characoidei	ANCESTRAL SPECIES	102	ENSGT00940000177027	ENSGT00940000164577.b	ENSGT00940000166254.a	ENSGT00940000178677	ENSGT00950000183177.a.a.a.a.g	ENSGT00940000164356.a.g	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.b	ENSGT00940000154998.a.b	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000156386	ENSGT00940000155875	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00550000075136	ENSGT00440000037505.b	ENSGT00940000155470.a	ENSGT00390000006788.a.a
Red-bellied piranha	MODERN SPECIES	95	ENSPNAG00000010054	arl3l2 (ENSPNAG00000010083)	rgs14a (ENSPNAG00000010119)	SLC34A1 (ENSPNAG00000010150)	ENSPNAG00000010184	BNIP1 (ENSPNAG00000010213)	nkx2.5 (ENSPNAG00000010223)	stc2a (ENSPNAG00000010234)	cpeb4a (ENSPNAG00000010337)	MSX2 (ENSPNAG00000010350)	DRD1 (ENSPNAG00000010364)	kif3a (ENSPNAG00000010505)	ENSPNAG00000010543	ENSPNAG00000001406	kctd16a (ENSPNAG00000010562) #17	nr3c1 (ENSPNAG00000010593) #22	fgf1a (ENSPNAG00000010607)	ndfip1 (ENSPNAG00000010636) #26	gnpda1 (ENSPNAG00000001421) #28	hspa4b (ENSPNAG00000010764)	SLC4A11 (ENSPNAG00000010831)	ENSPNAG00000010851	ENSPNAG00000010866	smyd5 (ENSPNAG00000001464)	ENSPNAG00000001472	nudt22 (ENSPNAG00000010939)	exosc3 (ENSPNAG00000010975)	cdx1a (ENSPNAG00000010979)	pdgfrb (ENSPNAG00000011017)	csf1ra (ENSPNAG00000011099)	HMGXB3 (ENSPNAG00000011123)
Mexicana tetra	MODERN SPECIES	23	arl3l2 (ENSAMXG00000018516)	rgs14a (ENSAMXG00000034408)	ENSAMXG00000044001	SLC34A1 (ENSAMXG00000018474)	adra2db (ENSAMXG00000025107)	BNIP1 (ENSAMXG00000038546)	nkx2.5 (ENSAMXG00000030019)	stc2a (ENSAMXG00000037057)	ENSAMXG00000043304	cpeb4a (ENSAMXG00000030295)	ENSAMXG00000038880	DRD1 (ENSAMXG00000025106)	kif3a (ENSAMXG00000011654)	ENSAMXG00000041131	kctd16a (ENSAMXG00000030164) #17	nr3c1 (ENSAMXG00000011646) #22	fgf1a (ENSAMXG00000035950)	ndfip1 (ENSAMXG00000011640) #26	gnpda1 (ENSAMXG00000011634) #28	hspa4b (ENSAMXG00000011616)	MARS2 (ENSAMXG00000011610)	med12 (ENSAMXG00000011603)	ENSAMXG00000011595	ENOX2 (ENSAMXG00000011589)	ENSAMXG00000030265	SPOCK1 (ENSAMXG00000015732)	etf1a (ENSAMXG00000037774)	fbxw11a (ENSAMXG00000015774)	ENSAMXG00000029171	fgf18a (ENSAMXG00000034427)	ENSAMXG00000015803
Electric eel	MODERN SPECIES	106													kif3a (ENSEEEG00000015647)	ENSEEEG00000015644	kctd16a (ENSEEEG00000015643) #17	nr3c1 (ENSEEEG00000015582) #22	ENSEEEG00000015578	ndfip1 (ENSEEEG00000015577) #26	gnpda1 (ENSEEEG00000015575) #28	hspa4b (ENSEEEG00000014903)	MARS2 (ENSEEEG00000014852)	med12 (ENSEEEG00000014844)	ENSEEEG00000014838	ENOX2 (ENSEEEG00000014836)	SLC4A11 (ENSEEEG00000014835)	ENSEEEG00000014834	ENSEEEG00000014833	smyd5 (ENSEEEG00000014800)	ENSEEEG00000014798	nudt22 (ENSEEEG00000014796)	exosc3 (ENSEEEG00000014793)
Channel catfish	MODERN SPECIES	5	ENSIPUG00000010512	ENSIPUG00000010492	rgs14a (ENSIPUG00000010477)	ENSIPUG00000010459	SLC34A1 (ENSIPUG00000010376)	ENSIPUG00000010353	bnip1 (ENSIPUG00000010328)	nkx2-5 (ENSIPUG00000010324)	STC2 (ENSIPUG00000010313)	cpeb4a (ENSIPUG00000010268)	MSX2 (ENSIPUG00000010256)	DRD1 (ENSIPUG00000010246)	KIF3A (ENSIPUG00000010161)	ENSIPUG00000010109	kctd16a (ENSIPUG00000010102) #17	nr3c1 (ENSIPUG00000010081) #22	fgf1a (ENSIPUG00000010050)	ndfip1l (ENSIPUG00000010007) #26	gnpda1 (ENSIPUG00000009918) #28	hspa4b (ENSIPUG00000009875)	MARS2 (ENSIPUG00000009852)	med12 (ENSIPUG00000009787)	ENSIPUG00000009667	ENOX2 (ENSIPUG00000009623)	ENSIPUG00000009609	ENSIPUG00000009583	smyd5 (ENSIPUG00000009532)	ENSIPUG00000009518	nudt22 (ENSIPUG00000009503)	EXOSC3 (ENSIPUG00000009488)	cdx1 (ENSIPUG00000009477)
Cyprinoidei	ANCESTRAL SPECIES	9	ENSGT00940000157891	ENSGT00940000154808.a.b.j.a	ENSGT00940000153147.a.b	ENSGT00940000155070.a.b.a	ENSGT00940000162301	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.b	ENSGT00940000154998.a.b.k	ENSGT00940000164716.A	ENSGT00940000157037.a.d	ENSGT00990000209953	ENSGT00940000156386	ENSGT00940000155875	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00550000075136	ENSGT00440000037505.b	ENSGT00940000155470.a	ENSGT00390000006788.a.a	ENSGT00940000154894.a	ENSGT00940000160491.d.b.b	ENSGT00940000165596.d	ENSGT00940000160491.d.b.a	ENSGT00510000047420	ENSGT00940000160376	ENSGT00390000017869
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	268	ENSGT00390000005989.a.b.b.a	ENSGT00940000154998.a.b.k.b	ENSGT00940000164716.A.a	ENSGT00940000157037.a.d	ENSGT00990000209953.b	ENSGT00940000156386.e.b	ENSGT00940000156071.a.b.a.a #17	ENSGT00940000156385.a.b #22	ENSGT00390000012721.a.j.b.b #26	ENSGT00990000209953.a	ENSGT00940000156386.e.a	ENSGT00940000156386.f	ENSGT00940000155875.m	ENSGT00940000156071.a.a #17	ENSGT00940000156071.a.b.b #17	ENSGT00940000156385.a.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.j.b.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b.a.b	ENSGT00940000156067.g.b.a.a	ENSGT00550000075136	ENSGT00440000037505.b.d.b	ENSGT00940000155470.a.b	ENSGT00390000006788.a.a.i.a	ENSGT00940000154894.a.b	ENSGT00940000160491.d.b.b	ENSGT00510000047420.l
Goldfish	MODERN SPECIES	5	slit3 (ENSCARG00000006589)	CXCL14 (ENSCARG00000007898)	fam13b (ENSCARG00000007927)	hnrnpa0a (ENSCARG00000008003)	dpf2l (ENSCARG00000008017)	BNIP1 (ENSCARG00000008054)	nkx2.5 (ENSCARG00000008074)	stc2a (ENSCARG00000008081)	cpeb4a (ENSCARG00000008113)	msx2a (ENSCARG00000008376)	ENSCARG00000008381	il4 (ENSCARG00000008385)	kif3a (ENSCARG00000008420)	ENSCARG00000008797	kctd16a (ENSCARG00000008801) #17	nr3c1 (ENSCARG00000008819) #22	fgf1a (ENSCARG00000008975)	ndfip1 (ENSCARG00000008984) #26	gnpda1 (ENSCARG00000008994) #28	hspa4b (ENSCARG00000009046)	ENSCARG00000009174	ENSCARG00000009216	ENOX2 (ENSCARG00000009253)	SLC4A11 (ENSCARG00000009333)	ENSCARG00000009424	ENSCARG00000009434	smyd5 (ENSCARG00000009444)	ENSCARG00000009459	ENSCARG00000009467	nudt22 (ENSCARG00000009482)	gdf9 (ENSCARG00000009496)
Cyprininae_a	ANCESTRAL SPECIES	104	ENSGT00940000154808.a.b.j.a	ENSGT00940000155070.a.b.a.b	ENSGT00940000162301	ENSGT00390000014412.l	ENSGT00940000158996.h	ENSGT00390000005989.a.b.b.b	ENSGT00940000154998.a.b.k.a	ENSGT00940000164716.A.b	ENSGT00940000157037.a.d.a	ENSGT00990000209953.a	ENSGT00940000156386.e.a	ENSGT00940000156386.f	ENSGT00940000155875.m	ENSGT00940000156071.a.a #17	ENSGT00940000156071.a.b.b #17	ENSGT00940000156385.a.a #22	ENSGT00390000012721.a.j.b.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b.b	ENSGT00440000037505.b.d.a	ENSGT00940000155470.a.a.b	ENSGT00390000006788.a.a.i.b.b	ENSGT00940000154894.a.a	ENSGT00940000165596.d	ENSGT00940000160491.d.b.a	ENSGT00510000047420.k.a	ENSGT00940000160376	ENSGT00390000017869.d	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000159568
Common carp reference	MODERN SPECIES	35	ENSCCRG00000061370	fam13b (ENSCCRG00000007416)	ENSCCRG00000040735	ENSCCRG00000082153	dpf2l (ENSCCRG00000007368)	BNIP1 (ENSCCRG00000007411)	nkx2.5 (ENSCCRG00000007406)	stc2a (ENSCCRG00000007402)	cpeb4a (ENSCCRG00000071205)	msx2a (ENSCCRG00000082142)	ENSCCRG00000060463	il4 (ENSCCRG00000062646)	kif3a (ENSCCRG00000005867)	ENSCCRG00000082172	kctd16a (ENSCCRG00000031009) #17	nr3c1 (ENSCCRG00000011027) #22	ndfip1 (ENSCCRG00000062030) #26	gnpda1 (ENSCCRG00000053353) #28	hspa4b (ENSCCRG00000011122)	med12 (ENSCCRG00000079047)	ENSCCRG00000025589	ENSCCRG00000080121	ENSCCRG00000069106	ENSCCRG00000027125	ENSCCRG00000064019	ENSCCRG00000044432	smyd5 (ENSCCRG00000071927)	ENSCCRG00000034977	nudt22 (ENSCCRG00000034982)	gdf9 (ENSCCRG00000067422)	atp7a (ENSCCRG00000062965)
Golden-line barbel	MODERN SPECIES	509															kctd16a (ENSSGRG00000047733) #17	nr3c1 (ENSSGRG00000047732) #22	ENSSGRG00000047731	SLC4A11 (ENSSGRG00000047730)	ENSSGRG00000047728	ENOX2 (ENSSGRG00000047727)	ENSSGRG00000047576	med12 (ENSSGRG00000046263)	hspa4b (ENSSGRG00000044427)	gnpda1 (ENSSGRG00000044337) #28	ndfip1 (ENSSGRG00000044336) #26	fgf1a (ENSSGRG00000044335)	ENSSGRG00000044329	nudt22 (ENSSGRG00000044326)	gdf9 (ENSSGRG00000044322)	ENSSGRG00000044319	atp7a (ENSSGRG00000043921)
Cyprininae	ANCESTRAL SPECIES	268	ENSGT00940000153147.a.b	ENSGT00940000155070.a.b.a.a	ENSGT00940000162301	ENSGT00390000014412.l	ENSGT00940000158996.h	ENSGT00390000005989.a.b.b.b	ENSGT00940000154998.a.b.k.a	ENSGT00940000164716.A.b	ENSGT00390000005989.a.b.b.a	ENSGT00940000154998.a.b.k.b	ENSGT00940000164716.A.a	ENSGT00940000157037.a.d	ENSGT00990000209953.b	ENSGT00940000156386.e.b	ENSGT00940000156071.a.b.a.a #17	ENSGT00940000156385.a.b #22	ENSGT00390000012721.a.j.b.b #26	ENSGT00990000209953.a	ENSGT00940000156386.e.a	ENSGT00940000156386.f	ENSGT00940000155875.m	ENSGT00940000156071.a.a #17	ENSGT00940000156071.a.b.b #17	ENSGT00940000156385.a.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.j.b.a #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b.a.b	ENSGT00940000156067.g.b.a.a	ENSGT00550000075136	ENSGT00440000037505.b.d.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	448															kctd16a (ENSCARG00000044637) #17	nr3c1 (ENSCARG00000044559) #22	ndfip1 (ENSCARG00000044541) #26
Goldfish	MODERN SPECIES	32	CXCL14 (ENSCARG00000058412)	fam13b (ENSCARG00000058522)	KLHL3 (ENSCARG00000058914)	ENSCARG00000059629	dpf2l (ENSCARG00000059652)	CHRM1 (ENSCARG00000060139)	nkx2.5 (ENSCARG00000060156)	stc2a (ENSCARG00000060172)	cpeb4a (ENSCARG00000060205)	msx2a (ENSCARG00000060278)	ENSCARG00000060304	il4 (ENSCARG00000060309)	kif3a (ENSCARG00000060327)	ENSCARG00000060458	kctd16a (ENSCARG00000060484) #17	nr3c1 (ENSCARG00000060515) #22	ndfip1 (ENSCARG00000060662) #26	hspa4b (ENSCARG00000060769)	MARS2 (ENSCARG00000061972)	med12 (ENSCARG00000062004)	ENSCARG00000062270	si:dkey-6i22.5 (ENSCARG00000062283)	tmx2a (ENSCARG00000062288)	gatad1 (ENSCARG00000062305)	ccng1 (ENSCARG00000062326)	nudcd2 (ENSCARG00000062358)	gabra6a (ENSCARG00000062373)	gabrb2a (ENSCARG00000062425)	ATP10B (ENSCARG00000062738)	atp7a (ENSCARG00000063158)	ENSCARG00000063636
Cyprininae_a	ANCESTRAL SPECIES	467									ENSGT00390000005989.a.b.b.a	ENSGT00940000154998.a.b.k.b	ENSGT00940000164716.A.a	ENSGT00940000157037.a.d.b	ENSGT00990000209953.b	ENSGT00940000156386.e.b	ENSGT00940000156071.a.b.a.a #17	ENSGT00940000156385.a.b #22	ENSGT00390000012721.a.j.b.b #26	ENSGT00940000156067.g.b.a.a	ENSGT00550000075136	ENSGT00440000037505.b.d.b	ENSGT00940000155470.a.b	ENSGT00390000006788.a.a.i.a	ENSGT00940000154894.a.b	ENSGT00940000160491.d.b.b	ENSGT00510000047420.l
Common carp reference	MODERN SPECIES	20	fam13b (ENSCCRG00000065847)	ENSCCRG00000039094	hnrnpa0a (ENSCCRG00000059572)	dpf2l (ENSCCRG00000057318)	ENSCCRG00000007360	ENSCCRG00000032673	stc2a (ENSCCRG00000032679)	cpeb4a (ENSCCRG00000073615)	msx2a (ENSCCRG00000004546)	ENSCCRG00000064430	ENSCCRG00000071522	il4 (ENSCCRG00000052605)	ENSCCRG00000005180	ENSCCRG00000062208	kctd16a (ENSCCRG00000011025) #17	nr3c1 (ENSCCRG00000030995) #22	ndfip1 (ENSCCRG00000030991) #26	gnpda1 (ENSCCRG00000053604) #28	hspa4b (ENSCCRG00000049313)	ENSCCRG00000081068	med12 (ENSCCRG00000020840)	ENSCCRG00000079769	ENSCCRG00000071405	ENSCCRG00000077637	ENSCCRG00000046149	ENSCCRG00000046273	nudt22 (ENSCCRG00000026670)	gdf9 (ENSCCRG00000016143)	ENSCCRG00000016141	atp7a (ENSCCRG00000077206)	ENSCCRG00000028655
Golden-line barbel	MODERN SPECIES	469										cpeb4a (ENSSGRG00000023244)	msx2a (ENSSGRG00000023241)	ENSSGRG00000023240	il4 (ENSSGRG00000023239)	kif3a (ENSSGRG00000022894)	kctd16a (ENSSGRG00000022879) #17	nr3c1 (ENSSGRG00000022242) #22	hspa4b (ENSSGRG00000021984)	MARS2 (ENSSGRG00000021959)	med12 (ENSSGRG00000021702)	ENSSGRG00000021168	ENOX2 (ENSSGRG00000020966)
Zebrafish	MODERN SPECIES	5	dpf2l (ENSDARG00000037291)	CHRM1 (ENSDARG00000037292)	BNIP1 (ENSDARG00000078259)	nkx2.5 (ENSDARG00000018004)	stc2a (ENSDARG00000056680)	cpeb4a (ENSDARG00000056691)	ENSDARG00000105348	msx2a (ENSDARG00000104651)	ENSDARG00000110728	ENSDARG00000071640	ENSDARG00000105377	il4 (ENSDARG00000087909)	kif3a (ENSDARG00000087538)	ENSDARG00000101178	kctd16a (ENSDARG00000004648) #17	nr3c1 (ENSDARG00000025032) #22	fgf1a (ENSDARG00000017542)	ndfip1 (ENSDARG00000013979) #26	gnpda1 (ENSDARG00000037307) #28	hspa4b (ENSDARG00000018989)	MARS2 (ENSDARG00000009218)	med12 (ENSDARG00000103953)	ENSDARG00000076547	ENOX2 (ENSDARG00000078942)	ENSDARG00000074582	smyd5 (ENSDARG00000071669)	ENSDARG00000056830	nudt22 (ENSDARG00000071671)	gdf9 (ENSDARG00000003229)	ENSDARG00000079125	atp7a (ENSDARG00000003699)
Euteleosteomorpha	ANCESTRAL SPECIES	25													ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491	ENSGT00940000159568
Acanthomorphata	ANCESTRAL SPECIES	1	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000156281	ENSGT00940000159746	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00940000172088	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.kb	ENSGT00940000154245.A.jb.b	ENSGT00940000159531
Euacanthomorphacea	ANCESTRAL SPECIES	10	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491	ENSGT00940000159568
Percomorphaceae	ANCESTRAL SPECIES	11	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491	ENSGT00940000159568
Percomorphaceae_B	ANCESTRAL SPECIES	14	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Ovalentaria	ANCESTRAL SPECIES	15	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Atherinomorphae	ANCESTRAL SPECIES	9	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Cyprinodontiformes	ANCESTRAL SPECIES	8	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Aplocheiloidei	ANCESTRAL SPECIES	25	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Mangrove rivulus	MODERN SPECIES	76	si:ch211-153b23.5 (ENSKMAG00000006863)	si:ch211-153b23.4 (ENSKMAG00000006829)	ENSKMAG00000006792	irg1l (ENSKMAG00000006757)	glod5 (ENSKMAG00000006732)	RLIM (ENSKMAG00000006720)	NEXMIF (ENSKMAG00000006705)	abcb7 (ENSKMAG00000006629)	uprt (ENSKMAG00000006574)	zdhhc15b (ENSKMAG00000006538)	fgf16 (ENSKMAG00000006516)	atrx (ENSKMAG00000006460)	kif3a (ENSKMAG00000006374)	ENSKMAG00000006343 #13	kctd16a (ENSKMAG00000006334) #17	nr3c1 (ENSKMAG00000006317) #22	fgf1a (ENSKMAG00000006301)	NDFIP1 (ENSKMAG00000006276) #26	gnpda1 (ENSKMAG00000006251) #28	hspa4b (ENSKMAG00000006228)	uqcrq (ENSKMAG00000006213)	gdf9 (ENSKMAG00000006187)	septin8b (ENSKMAG00000006130)	nudcd2 (ENSKMAG00000006070)	ccng1 (ENSKMAG00000006091)	gabra6a (ENSKMAG00000006029)	gabrb2a (ENSKMAG00000005990)	ATP10B (ENSKMAG00000005946)	ENSKMAG00000005917	atp7a (ENSKMAG00000005839)	sfxn1 (ENSKMAG00000005788)
Turquoise killifish	MODERN SPECIES	1610	FRMPD3 (ENSNFUG00015002296)	CU468142.1 (ENSNFUG00015002317)	glod5 (ENSNFUG00015002323)	RLIM (ENSNFUG00015002326)	KIAA2022 (ENSNFUG00015002332)	ENSNFUG00015002337	ABCB7 (ENSNFUG00015002359)	UPRT (ENSNFUG00015002431)	zdhhc15b (ENSNFUG00015002436)	fgf16 (ENSNFUG00015002447)	ENSNFUG00015002548	KIF3A (ENSNFUG00015003196)	ENSNFUG00015003228	ENSNFUG00015003232	KCTD16A (ENSNFUG00015003238) #17	nr3c1 (ENSNFUG00015003243) #22	fgf1a (ENSNFUG00015003249)	NDFIP1 (ENSNFUG00015003259) #26	GNPDA1 (ENSNFUG00015003276) #28	hspa4b (ENSNFUG00015003337)	uqcrq (ENSNFUG00015003568)	gdf9 (ENSNFUG00015008903)	ENSNFUG00015008927	SEPT8B (ENSNFUG00015009062)	CCNG1 (ENSNFUG00015009320)	NUDCD2 (ENSNFUG00015009344)	gabra6a (ENSNFUG00015009409)	gabrb2a (ENSNFUG00015009964)	ATP10B (ENSNFUG00015010148)	ENSNFUG00015010988	atp7a (ENSNFUG00015011036)
Cyprinodontoidei	ANCESTRAL SPECIES	19	ENSGT00940000157139.a	ENSGT00940000159349	ENSGT00940000159591	ENSGT00390000002292.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
NAME_4	ANCESTRAL SPECIES	20	ENSGT00940000157139.a	ENSGT00940000159349	ENSGT00940000159591	ENSGT00390000002292.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159568	ENSGT01030000234641.b.a.b.a.b
Sheepshead minnow	MODERN SPECIES	143	ccnjl (ENSCVAG00000019318)	C1QTNF2 (ENSCVAG00000019312)	slu7 (ENSCVAG00000019302)	glod5 (ENSCVAG00000019223)	RLIM (ENSCVAG00000019216)	NEXMIF (ENSCVAG00000019187)	abcb7 (ENSCVAG00000019177)	ENSCVAG00000019167	uprt (ENSCVAG00000019149)	zdhhc15b (ENSCVAG00000019109)	fgf16 (ENSCVAG00000019064)	atrx (ENSCVAG00000019038)	kif3a (ENSCVAG00000018881)	ENSCVAG00000018812 #13	kctd16a (ENSCVAG00000018790) #17	nr3c1 (ENSCVAG00000018781) #22	fgf1a (ENSCVAG00000018767)	ndfip1l (ENSCVAG00000018760) #26	gnpda1 (ENSCVAG00000018752) #28	hspa4b (ENSCVAG00000018725)	uqcrq (ENSCVAG00000018664)	gdf9 (ENSCVAG00000018658)	ENSCVAG00000018636	septin8b (ENSCVAG00000018622)	ccng1 (ENSCVAG00000018615)	nudcd2 (ENSCVAG00000018579)	gabra6a (ENSCVAG00000018557)	gabrb2a (ENSCVAG00000018531)	ENSCVAG00000018459	atp7a (ENSCVAG00000018227)	sfxn1 (ENSCVAG00000018100)
Mummichog	MODERN SPECIES	235	FABP6 (ENSFHEG00000012827)	ccnjl (ENSFHEG00000012803)	C1QTNF2 (ENSFHEG00000012796)	slu7 (ENSFHEG00000012789)	glod5 (ENSFHEG00000012686)	RLIM (ENSFHEG00000012682)	NEXMIF (ENSFHEG00000012675)	abcb7 (ENSFHEG00000012671)	uprt (ENSFHEG00000012659)	zdhhc15b (ENSFHEG00000012631)	fgf16 (ENSFHEG00000012584)	atrx (ENSFHEG00000012570)	kif3a (ENSFHEG00000012374)	ENSFHEG00000011417 #13	kctd16a (ENSFHEG00000011411) #17	nr3c1 (ENSFHEG00000011406) #22	fgf1a (ENSFHEG00000011371)	ndfip1l (ENSFHEG00000011365) #26	gnpda1 (ENSFHEG00000011321) #28	hspa4b (ENSFHEG00000011152)	uqcrq (ENSFHEG00000011099)	gdf9 (ENSFHEG00000011089)	SOWAHA (ENSFHEG00000011082)	septin8b (ENSFHEG00000011064)	ccng1 (ENSFHEG00000010988)	ENSFHEG00000010955	gabra6a (ENSFHEG00000010938)	ENSFHEG00000010902	gabrb2a (ENSFHEG00000010838)	ENSFHEG00000010476	ENSFHEG00000010324
Poeciliinae	ANCESTRAL SPECIES	11	ENSGT00940000157139.a	ENSGT00940000159349	ENSGT00940000159591	ENSGT00390000002292.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Poecilia	ANCESTRAL SPECIES	21	ENSGT00940000157139.a	ENSGT00940000159349	ENSGT00940000159591	ENSGT00390000002292.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159568	ENSGT01030000234641.b.a.b.a.b
NAME_6	DUPLICATION
NAME_6	ANCESTRAL SPECIES	17	ENSGT00940000157139.a	ENSGT00940000159349	ENSGT00940000159591	ENSGT00390000002292.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155763.b	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a.c #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159568	ENSGT01030000234641.b.a.b.a.b
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	2173													kif3a (ENSPLAG00000012044)	ENSPLAG00000012029 #13	kctd16a (ENSPLAG00000012013) #17	ENSPLAG00000011998 #22
Sailfin molly	MODERN SPECIES	3305															kctd16a (ENSPLAG00000002186) #17	ENSPLAG00000002180 #22
Amazon molly	MODERN SPECIES	278	FABP6 (ENSPFOG00000008983)	ccnjl (ENSPFOG00000008984)	C1QTNF2 (ENSPFOG00000009035)	slu7 (ENSPFOG00000009050)	glod5 (ENSPFOG00000009165)	RLIM (ENSPFOG00000009183)	NEXMIF (ENSPFOG00000009201)	abcb7 (ENSPFOG00000009217)	uprt (ENSPFOG00000009481)	zdhhc15b (ENSPFOG00000009523)	fgf16 (ENSPFOG00000009673)	ENSPFOG00000009718	kif3a (ENSPFOG00000010037)	ENSPFOG00000010289 #13	kctd16a (ENSPFOG00000010295) #17	nr3c1 (ENSPFOG00000010312) #22	fgf1a (ENSPFOG00000010459)	gnpda1 (ENSPFOG00000010479) #28	hspa4b (ENSPFOG00000010575)	uqcrq (ENSPFOG00000010765)	gdf9 (ENSPFOG00000010770)	SOWAHA (ENSPFOG00000020054)	septin8b (ENSPFOG00000010804)	ccng1 (ENSPFOG00000010990)	nudcd2 (ENSPFOG00000010992)	gabra6a (ENSPFOG00000011013)	gabrb2a (ENSPFOG00000011048)	ENSPFOG00000011201	atp7a (ENSPFOG00000011656)	sfxn1 (ENSPFOG00000011868)	ppp2caa (ENSPFOG00000011971)
NAME_6	ANCESTRAL SPECIES																	ENSGT00940000156385.a.d #22
Sailfin molly	MODERN SPECIES	726																nr3c1 (ENSPLAG00000020243) #22	fgf1a (ENSPLAG00000020225)	NDFIP1 (ENSPLAG00000020204) #26	gnpda1 (ENSPLAG00000020188) #28	hspa4b (ENSPLAG00000020157)	uqcrq (ENSPLAG00000020074)	gdf9 (ENSPLAG00000020060)	ENSPLAG00000020053	septin8b (ENSPLAG00000020037)	ccng1 (ENSPLAG00000019987)	nudcd2 (ENSPLAG00000019968)	gabra6a (ENSPLAG00000019955)	gabrb2a (ENSPLAG00000019949)	ATP10B (ENSPLAG00000019919)	atp7a (ENSPLAG00000019825)	sfxn1 (ENSPLAG00000019769)
Guppy	MODERN SPECIES	440	FABP6 (ENSPREG00000004330)	ccnjl (ENSPREG00000004337)	C1QTNF2 (ENSPREG00000004343)	slu7 (ENSPREG00000004355)	glod5 (ENSPREG00000004385)	RLIM (ENSPREG00000004401)	NEXMIF (ENSPREG00000004432)	abcb7 (ENSPREG00000004451)	ENSPREG00000004481	uprt (ENSPREG00000004487)	zdhhc15b (ENSPREG00000004506)	fgf16 (ENSPREG00000004531)	atrx (ENSPREG00000004549)	kif3a (ENSPREG00000004605)	kctd16a (ENSPREG00000004638) #17	nr3c1 (ENSPREG00000004647) #22	fgf1a (ENSPREG00000004667)	NDFIP1 (ENSPREG00000004705) #26	gnpda1 (ENSPREG00000004902) #28	hspa4b (ENSPREG00000005060)	uqcrq (ENSPREG00000005153)	gdf9 (ENSPREG00000005167)	SOWAHA (ENSPREG00000005185)	septin8b (ENSPREG00000005197)	ccng1 (ENSPREG00000005223)	nudcd2 (ENSPREG00000005279)	gabra6a (ENSPREG00000005300)	gabrb2a (ENSPREG00000005395)	ENSPREG00000005574	ENSPREG00000005682	atp7a (ENSPREG00000005701)
Platyfish	MODERN SPECIES	15	adra1bb (ENSXMAG00000009000)	ccnjl (ENSXMAG00000009002)	C1QTNF2 (ENSXMAG00000009006)	slu7 (ENSXMAG00000009007)	glod5 (ENSXMAG00000009051)	RLIM (ENSXMAG00000029342)	NEXMIF (ENSXMAG00000027281)	abcb7 (ENSXMAG00000009070)	uprt (ENSXMAG00000009085)	zdhhc15b (ENSXMAG00000009092)	fgf16 (ENSXMAG00000026062)	atrx (ENSXMAG00000009112)	kif3a (ENSXMAG00000009145)	ENSXMAG00000009163 #13	kctd16a (ENSXMAG00000009166) #17	nr3c1 (ENSXMAG00000009167) #22	fgf1a (ENSXMAG00000028252)	NDFIP1 (ENSXMAG00000023271) #26	gnpda1 (ENSXMAG00000009192) #28	hspa4b (ENSXMAG00000009200)	uqcrq (ENSXMAG00000009224)	gdf9 (ENSXMAG00000009227)	ENSXMAG00000024517	septin8b (ENSXMAG00000009231)	ccng1 (ENSXMAG00000009248)	nudcd2 (ENSXMAG00000009257)	gabra6a (ENSXMAG00000009263)	gabrb2a (ENSXMAG00000009289)	ENSXMAG00000009322	ENSXMAG00000009345	atp7a (ENSXMAG00000009349)
Oryzias	ANCESTRAL SPECIES	17	ENSGT01100000263824	ENSGT00390000001775.A	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155763.b	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Oryzias_a	ANCESTRAL SPECIES	22	ENSGT00390000001775.A	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000155875	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Japanese Medaka HdrR	MODERN SPECIES	1	zgc:174917 (ENSORLG00000006186)	si:ch211-153b23.5 (ENSORLG00000006177)	si:ch211-153b23.4 (ENSORLG00000006169)	ENSORLG00000006161	irg1l (ENSORLG00000006152)	glod5 (ENSORLG00000006138)	RLIM (ENSORLG00000026942)	NEXMIF (ENSORLG00000006123)	abcb7 (ENSORLG00000006120)	uprt (ENSORLG00000006109)	zdhhc15b (ENSORLG00000006098)	fgf16 (ENSORLG00000006087)	atrx (ENSORLG00000006075)	ENSORLG00000006035	kctd16a (ENSORLG00000006030) #17	nr3c1 (ENSORLG00000006022) #22	fgf1a (ENSORLG00000006013)	ENSORLG00000006004 #26	gnpda1 (ENSORLG00000005988) #28	hspa4b (ENSORLG00000005958)	uqcrq (ENSORLG00000024706)	gdf9 (ENSORLG00000024393)	ENSORLG00000005833	septin8b (ENSORLG00000005830)	ccng1 (ENSORLG00000005817)	nudcd2 (ENSORLG00000005782)	gabra6a (ENSORLG00000005768)	gabrb2a (ENSORLG00000005749)	ENSORLG00000005735	atp7a (ENSORLG00000022734)	atp7a (ENSORLG00000005709)
Chinese medaka	MODERN SPECIES	25	zgc:174917 (ENSOSIG00000000315)	si:ch211-153b23.5 (ENSOSIG00000000311)	si:ch211-153b23.4 (ENSOSIG00000000309)	ENSOSIG00000000306	irg1l (ENSOSIG00000000290)	glod5 (ENSOSIG00000000272)	RLIM (ENSOSIG00000000265)	NEXMIF (ENSOSIG00000000261)	abcb7 (ENSOSIG00000000134)	uprt (ENSOSIG00000000044)	zdhhc15b (ENSOSIG00000023515)	fgf16 (ENSOSIG00000023511)	atrx (ENSOSIG00000023448)	ENSOSIG00000023382	kctd16a (ENSOSIG00000023377) #17	nr3c1 (ENSOSIG00000023373) #22	NDFIP1 (ENSOSIG00000023366) #26	gnpda1 (ENSOSIG00000023363) #28	hspa4b (ENSOSIG00000023185)	uqcrq (ENSOSIG00000023150)	gdf9 (ENSOSIG00000023148)	ENSOSIG00000023145	septin8b (ENSOSIG00000022829)	ccng1 (ENSOSIG00000022744)	nudcd2 (ENSOSIG00000022743)	gabra6a (ENSOSIG00000022740)	gabrb2a (ENSOSIG00000022737)	ENSOSIG00000022726	ENSOSIG00000022700	atp7a (ENSOSIG00000022613)	sfxn1 (ENSOSIG00000022558)
Oryzias_b	ANCESTRAL SPECIES	20	ENSGT01100000263824	ENSGT00390000001775.A	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155763.b	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726.nb	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Indian medaka	MODERN SPECIES	16	zgc:174917 (ENSOMEG00000007731)	si:ch211-153b23.5 (ENSOMEG00000007710)	si:ch211-153b23.4 (ENSOMEG00000007682)	ENSOMEG00000007661	irg1l (ENSOMEG00000007624)	RLIM (ENSOMEG00000007604)	NEXMIF (ENSOMEG00000007555)	abcb7 (ENSOMEG00000007510)	uprt (ENSOMEG00000007408)	zdhhc15b (ENSOMEG00000007372)	fgf16 (ENSOMEG00000007350)	atrx (ENSOMEG00000007314)	ENSOMEG00000007212	ENSOMEG00000007171	kctd16a (ENSOMEG00000007154) #17	nr3c1 (ENSOMEG00000007143) #22	fgf1a (ENSOMEG00000007095)	NDFIP1 (ENSOMEG00000007123) #26	gnpda1 (ENSOMEG00000007063) #28	hspa4b (ENSOMEG00000006864)	uqcrq (ENSOMEG00000006769)	gdf9 (ENSOMEG00000006786)	ENSOMEG00000006754	ENSOMEG00000006740	septin8b (ENSOMEG00000006717)	ccng1 (ENSOMEG00000006662)	nudcd2 (ENSOMEG00000006645)	gabra6a (ENSOMEG00000006626)	gabrb2a (ENSOMEG00000006602)	ENSOMEG00000006549	ENSOMEG00000006486
Ovalentaria_B	ANCESTRAL SPECIES	13	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Cichlidae	ANCESTRAL SPECIES	8	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000163472.e.b.f	ENSGT00940000154393.s.b.a.a	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531
Pseudocrenilabrinae	ANCESTRAL SPECIES	17	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b.b #28	ENSGT00940000163472.e.b.f.d	ENSGT00940000154393.s.b.a.a	ENSGT00940000163472.e.b.f.c	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	20	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b.b #28	ENSGT00940000163472.e.b.f.d	ENSGT00940000154393.s.b.a.a	ENSGT00940000163472.e.b.f.c	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b
Haplochromini	ANCESTRAL SPECIES	14	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b.b #28	ENSGT00940000163472.e.b.f.d	ENSGT00940000154393.s.b.a.a	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531
Haplochromini_A	ANCESTRAL SPECIES	13	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b.b #28	ENSGT00940000163472.e.b.f.d	ENSGT00940000154393.s.b.a.a	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531
Haplochromini_B	ANCESTRAL SPECIES	7	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000155875	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b.b #28	ENSGT00390000014316.c.b.a #28	ENSGT00940000163472.e.b.f.c	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531
Eastern happy	MODERN SPECIES	11	si:ch211-153b23.5 (ENSACLG00000005461)	si:ch211-153b23.4 (ENSACLG00000005471)	ENSACLG00000005894	irg1l (ENSACLG00000005905)	glod5 (ENSACLG00000005922)	RLIM (ENSACLG00000005931)	NEXMIF (ENSACLG00000005945)	abcb7 (ENSACLG00000005983)	uprt (ENSACLG00000006041)	zdhhc15b (ENSACLG00000006069)	fgf16 (ENSACLG00000006080)	atrx (ENSACLG00000006093)	kif3a (ENSACLG00000006732)	ENSACLG00000006765	kctd16a (ENSACLG00000006778) #17	nr3c1 (ENSACLG00000006789) #22	fgf1a (ENSACLG00000006803)	NDFIP1 (ENSACLG00000006807) #26	gnpda1 (ENSACLG00000006826) #28	ENSACLG00000006842	ENSACLG00000006852	hspa4b (ENSACLG00000006860)	uqcrq (ENSACLG00000006909)	gdf9 (ENSACLG00000006918)	septin8b (ENSACLG00000006927)	ENSACLG00000006975	ccng1 (ENSACLG00000006987)	nudcd2 (ENSACLG00000006983)	gabra6a (ENSACLG00000007004)	gabrb2a (ENSACLG00000007014)	ENSACLG00000007051
Zebra mbuna	MODERN SPECIES	1102	si:ch211-153b23.5 (ENSMZEG00005011418)	si:ch211-153b23.4 (ENSMZEG00005011433)	ENSMZEG00005011450	irg1l (ENSMZEG00005011462)	glod5 (ENSMZEG00005011475)	RLIM (ENSMZEG00005011486)	NEXMIF (ENSMZEG00005011504)	abcb7 (ENSMZEG00005011515)	uprt (ENSMZEG00005011538)	zdhhc15b (ENSMZEG00005011558)	fgf16 (ENSMZEG00005011580)	atrx (ENSMZEG00005011594)	kif3a (ENSMZEG00005011622)	ENSMZEG00005011658	kctd16a (ENSMZEG00005011667) #17	nr3c1 (ENSMZEG00005011670) #22	fgf1a (ENSMZEG00005011694)	NDFIP1 (ENSMZEG00005011717) #26	gnpda1 (ENSMZEG00005011736) #28	ENSMZEG00005011744	hspa4b (ENSMZEG00005011784)	uqcrq (ENSMZEG00005011831)	gdf9 (ENSMZEG00005011841)	septin8b (ENSMZEG00005011859)	ENSMZEG00005011910	ccng1 (ENSMZEG00005011916)	nudcd2 (ENSMZEG00005011928)	gabra6a (ENSMZEG00005011940)	gabrb2a (ENSMZEG00005011954)	ENSMZEG00005011985	ENSMZEG00005012032
P. nyererei	MODERN SPECIES	296	si:ch211-153b23.5 (ENSPNYG00000000249)	si:ch211-153b23.4 (ENSPNYG00000000250)	ENSPNYG00000000251	irg1l (ENSPNYG00000000252)	glod5 (ENSPNYG00000000253)	RLIM (ENSPNYG00000000254)	NEXMIF (ENSPNYG00000000255)	abcb7 (ENSPNYG00000000257)	uprt (ENSPNYG00000000258)	zdhhc15b (ENSPNYG00000000259)	fgf16 (ENSPNYG00000000260)	atrx (ENSPNYG00000000261)	kif3a (ENSPNYG00000000262)	ENSPNYG00000000263 #13	kctd16a (ENSPNYG00000000264) #17	nr3c1 (ENSPNYG00000000265) #22	fgf1a (ENSPNYG00000000266)	NDFIP1 (ENSPNYG00000000267) #26	gnpda1 (ENSPNYG00000000268) #28	ENSPNYG00000000269	ENSPNYG00000000270	hspa4b (ENSPNYG00000000271)	uqcrq (ENSPNYG00000000272)	gdf9 (ENSPNYG00000000273)	ENSPNYG00000000274	septin8b (ENSPNYG00000000275)	nudcd2 (ENSPNYG00000000276)	ccng1 (ENSPNYG00000000277)	gabra6a (ENSPNYG00000000278)	gabrb2a (ENSPNYG00000000279)	ATP10B (ENSPNYG00000000280)
Burton s mouthbrooder	MODERN SPECIES	310	ENSHBUG00000001740	si:ch211-153b23.4 (ENSHBUG00000000013)	ENSHBUG00000001760	irg1l (ENSHBUG00000001766)	glod5 (ENSHBUG00000001783)	RLIM (ENSHBUG00000001799)	NEXMIF (ENSHBUG00000001803)	abcb7 (ENSHBUG00000001820)	uprt (ENSHBUG00000001829)	zdhhc15b (ENSHBUG00000001849)	fgf16 (ENSHBUG00000001863)	atrx (ENSHBUG00000001883)	kif3a (ENSHBUG00000001906)	ENSHBUG00000001923 #13	kctd16a (ENSHBUG00000001929) #17	nr3c1 (ENSHBUG00000000846) #22	fgf1a (ENSHBUG00000001965)	NDFIP1 (ENSHBUG00000001977) #26	gnpda1 (ENSHBUG00000001995) #28	ENSHBUG00000002006	hspa4b (ENSHBUG00000002031)	uqcrq (ENSHBUG00000000023)	gdf9 (ENSHBUG00000002047)	ENSHBUG00000002052	septin8b (ENSHBUG00000002067)	nudcd2 (ENSHBUG00000002085)	gabra6a (ENSHBUG00000002098)	gabrb2a (ENSHBUG00000002118)	ATP10B (ENSHBUG00000002153)	ENSHBUG00000002173	atp7a (ENSHBUG00000002191)
Lyretail cichlid	MODERN SPECIES	292	zgc:174917 (ENSNBRG00000013423)	si:ch211-153b23.5 (ENSNBRG00000013408)	si:ch211-153b23.4 (ENSNBRG00000013392)	ENSNBRG00000013370	irg1l (ENSNBRG00000013354)	glod5 (ENSNBRG00000013345)	RLIM (ENSNBRG00000013331)	NEXMIF (ENSNBRG00000013324)	abcb7 (ENSNBRG00000013270)	uprt (ENSNBRG00000013241)	zdhhc15b (ENSNBRG00000013213)	fgf16 (ENSNBRG00000013118)	atrx (ENSNBRG00000013037)	kif3a (ENSNBRG00000012952)	kctd16a (ENSNBRG00000012932) #17	nr3c1 (ENSNBRG00000012902) #22	fgf1a (ENSNBRG00000012859)	NDFIP1 (ENSNBRG00000012830) #26	gnpda1 (ENSNBRG00000012814) #28	ENSNBRG00000012806	ENSNBRG00000012790	ENSNBRG00000012771	hspa4b (ENSNBRG00000012719)	uqcrq (ENSNBRG00000012700)	gdf9 (ENSNBRG00000012675)	ENSNBRG00000012663	septin8b (ENSNBRG00000012635)	ccng1 (ENSNBRG00000012614)	nudcd2 (ENSNBRG00000012608)	gabra6a (ENSNBRG00000012568)	gabrb2a (ENSNBRG00000012536)
Nile tilapia	MODERN SPECIES	11	si:ch211-153b23.5 (ENSONIG00000035754)	si:ch211-153b23.4 (ENSONIG00000017875)	ENSONIG00000028291	irg1l (ENSONIG00000017876)	glod5 (ENSONIG00000017880)	RLIM (ENSONIG00000017883)	NEXMIF (ENSONIG00000017886)	abcb7 (ENSONIG00000017887)	uprt (ENSONIG00000017888)	zdhhc15b (ENSONIG00000017893)	fgf16 (ENSONIG00000017896)	atrx (ENSONIG00000017898)	kif3a (ENSONIG00000017903)	ENSONIG00000037866 #13	kctd16a (ENSONIG00000035407) #17	nr3c1 (ENSONIG00000017907) #22	fgf1a (ENSONIG00000017912)	NDFIP1 (ENSONIG00000032831) #26	gnpda1 (ENSONIG00000017916) #28	ENSONIG00000042271	ENSONIG00000041420	ENSONIG00000033729	ENSONIG00000012894	hspa4b (ENSONIG00000012895)	uqcrq (ENSONIG00000042672)	gdf9 (ENSONIG00000012904)	ENSONIG00000040995	septin8b (ENSONIG00000012906)	nudcd2 (ENSONIG00000028204)	gabra6a (ENSONIG00000012917)	ccng1 (ENSONIG00000028753)
Midas cichlid	MODERN SPECIES	974	si:ch211-153b23.4 (ENSACIG00000006997)	ENSACIG00000006968	irg1l (ENSACIG00000006938)	ENSACIG00000006921	glod5 (ENSACIG00000006872)	RLIM (ENSACIG00000006846)	NEXMIF (ENSACIG00000006840)	abcb7 (ENSACIG00000006798)	uprt (ENSACIG00000006691)	zdhhc15b (ENSACIG00000006665)	fgf16 (ENSACIG00000006656)	atrx (ENSACIG00000006529)	ENSACIG00000006517	kif3a (ENSACIG00000006479)	kctd16a (ENSACIG00000006467) #17	nr3c1 (ENSACIG00000006445) #22	fgf1a (ENSACIG00000006424)	ndfip1l (ENSACIG00000006408) #26	gnpda1 (ENSACIG00000006237) #28	ENSACIG00000006213	ENSACIG00000006175	ENSACIG00000006165	hspa4b (ENSACIG00000006139)	uqcrq (ENSACIG00000006127)	gdf9 (ENSACIG00000006103)	ENSACIG00000006092	septin8b (ENSACIG00000006078)	ccng1 (ENSACIG00000006059)	nudcd2 (ENSACIG00000006048)	gabra6a (ENSACIG00000006028)	gabrb2a (ENSACIG00000006008)
Pomacentridae	ANCESTRAL SPECIES	4	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000155875.lb.b	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j.c	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Pomacentridae_A	ANCESTRAL SPECIES	17	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000155875.lb.b	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j.c	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Amphiprion	ANCESTRAL SPECIES	32														ENSGT00940000155875.lb.a	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j.c	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Clown anemonefish	MODERN SPECIES	3647															kctd16a (ENSAOCG00000019152) #17	nr3c1 (ENSAOCG00000019197) #22	fgf1a (ENSAOCG00000019230)	NDFIP1 (ENSAOCG00000019262) #26
Orange clownfish	MODERN SPECIES	4	ENSAPEG00000000648	anxa5a (ENSAPEG00000000308)	ccna2 (ENSAPEG00000019431)	bbs7 (ENSAPEG00000019379)	tmem33 (ENSAPEG00000019346)	phox2bb (ENSAPEG00000019328)	LIMCH1 (ENSAPEG00000019181)	ENSAPEG00000019147	ENSAPEG00000019062	nanos1 (ENSAPEG00000019024)	ENSAPEG00000019013	mif (ENSAPEG00000019008)	ENSAPEG00000018986	ENSAPEG00000018977	kctd16a (ENSAPEG00000018972) #17	nr3c1 (ENSAPEG00000018955) #22	fgf1a (ENSAPEG00000018936)	NDFIP1 (ENSAPEG00000018901) #26	gnpda1 (ENSAPEG00000018868) #28	hspa4b (ENSAPEG00000018807)	uqcrq (ENSAPEG00000018787)	gdf9 (ENSAPEG00000018761)	ENSAPEG00000018738	septin8b (ENSAPEG00000018701)	ccng1 (ENSAPEG00000018681)	nudcd2 (ENSAPEG00000018665)	gabra6a (ENSAPEG00000018649)	gabrb2a (ENSAPEG00000018618)	ATP10B (ENSAPEG00000018500)	ENSAPEG00000018484	atp7a (ENSAPEG00000018423)
Spiny chromis	MODERN SPECIES	1647													kif3a (ENSAPOG00000012902)	ENSAPOG00000012781	kctd16a (ENSAPOG00000000342) #17	nr3c1 (ENSAPOG00000012757) #22	fgf1a (ENSAPOG00000012746)	NDFIP1 (ENSAPOG00000012717) #26	gnpda1 (ENSAPOG00000012667) #28	hspa4b (ENSAPOG00000012626)	uqcrq (ENSAPOG00000012529)	gdf9 (ENSAPOG00000012512)	septin8b (ENSAPOG00000012502)	ccng1 (ENSAPOG00000012427)	nudcd2 (ENSAPOG00000012391)	gabra6a (ENSAPOG00000012354)	gabrb2a (ENSAPOG00000012205)	ENSAPOG00000012141	ENSAPOG00000011947	atp7a (ENSAPOG00000011912)	sfxn1 (ENSAPOG00000011816)
Bicolor damselfish	MODERN SPECIES	592	zgc:174917 (ENSSPAG00000012874)	si:ch211-153b23.5 (ENSSPAG00000012868)	irg1l (ENSSPAG00000012828)	glod5 (ENSSPAG00000012805)	RLIM (ENSSPAG00000012771)	NEXMIF (ENSSPAG00000012765)	ENSSPAG00000012741	abcb7 (ENSSPAG00000012679)	uprt (ENSSPAG00000012647)	zdhhc15b (ENSSPAG00000012628)	fgf16 (ENSSPAG00000012611)	atrx (ENSSPAG00000012566)	kif3a (ENSSPAG00000012515)	ENSSPAG00000012495	kctd16a (ENSSPAG00000012488) #17	nr3c1 (ENSSPAG00000012471) #22	fgf1a (ENSSPAG00000012455)	NDFIP1 (ENSSPAG00000012428) #26	gnpda1 (ENSSPAG00000012398) #28	hspa4b (ENSSPAG00000012304)	uqcrq (ENSSPAG00000012281)	gdf9 (ENSSPAG00000012258)	ENSSPAG00000012250	septin8b (ENSSPAG00000012225)	ccng1 (ENSSPAG00000012212)	nudcd2 (ENSSPAG00000012195)	gabra6a (ENSSPAG00000012170)
Percomorphaceae_C	ANCESTRAL SPECIES	16	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT01000000221770	ENSGT00940000155763.b	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Eupercaria	ANCESTRAL SPECIES	12	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT01000000221770	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Tetraodontidae	ANCESTRAL SPECIES	9	ENSGT00390000015700.b	ENSGT00390000001775.A	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Fugu	MODERN SPECIES	5	irg1l (ENSTRUG00000031604)	si:ch211-153b23.4 (ENSTRUG00000031149)	glod5 (ENSTRUG00000023963)	ENSTRUG00000029524	glod5 (ENSTRUG00000009099)	RLIM (ENSTRUG00000020047)	NEXMIF (ENSTRUG00000009017)	abcb7 (ENSTRUG00000008824)	uprt (ENSTRUG00000021064)	zdhhc15b (ENSTRUG00000008545)	fgf16 (ENSTRUG00000022728)	atrx (ENSTRUG00000022330)	kif3a (ENSTRUG00000007874)	ENSTRUG00000024067 #13	kctd16a (ENSTRUG00000007820) #17	nr3c1 (ENSTRUG00000007443) #22	fgf1a (ENSTRUG00000007357)	NDFIP1 (ENSTRUG00000007238) #26	hspa4b (ENSTRUG00000006546)	ENSTRUG00000021050	septin8b (ENSTRUG00000006162)	ccng1 (ENSTRUG00000027749)	nudcd2 (ENSTRUG00000032433)	gabra6a (ENSTRUG00000005703)	gabrb2a (ENSTRUG00000005507)	ATP10B (ENSTRUG00000004741)	ENSTRUG00000004586	atp7a (ENSTRUG00000003659)	sfxn1 (ENSTRUG00000002626)	atp5po (ENSTRUG00000002128)	si:ch1073-44g3.1 (ENSTRUG00000026079)
Tetraodon	MODERN SPECIES		zgc:174917 (ENSTNIG00000008960)	si:ch211-153b23.5 (ENSTNIG00000008959)	si:ch211-153b23.4 (ENSTNIG00000008958)	glod5 (ENSTNIG00000008957)	RLIM (ENSTNIG00000008956)	NEXMIF (ENSTNIG00000000495)	abcb7 (ENSTNIG00000008955)	uprt (ENSTNIG00000008954)	zdhhc15b (ENSTNIG00000008953)	fgf16 (ENSTNIG00000008952)	atrx (ENSTNIG00000008951)	kif3a (ENSTNIG00000008950)	kif3a (ENSTNIG00000008949)	ENSTNIG00000008948 #13	kctd16a (ENSTNIG00000008947) #17	nr3c1 (ENSTNIG00000008946) #22	fgf1a (ENSTNIG00000008945)	NDFIP1 (ENSTNIG00000008944) #26	gnpda1 (ENSTNIG00000008943) #28	hspa4b (ENSTNIG00000008942)	uqcrq (ENSTNIG00000002046)	gdf9 (ENSTNIG00000008941)	ENSTNIG00000008940	septin8b (ENSTNIG00000008939)	ccng1 (ENSTNIG00000008938)	nudcd2 (ENSTNIG00000008937)	gabra6a (ENSTNIG00000008936)	gabrb2a (ENSTNIG00000008935)	ENSTNIG00000008934	ENSTNIG00000008933	atp7a (ENSTNIG00000008932)
Eupecaria_A	ANCESTRAL SPECIES	13	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT01000000221770	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Ballan wrasse	MODERN SPECIES	292	si:ch211-153b23.5 (ENSLBEG00000026290)	si:ch211-153b23.4 (ENSLBEG00000026309)	ENSLBEG00000026324	irg1l (ENSLBEG00000026345)	glod5 (ENSLBEG00000026362)	RLIM (ENSLBEG00000026378)	NEXMIF (ENSLBEG00000026398)	abcb7 (ENSLBEG00000026411)	uprt (ENSLBEG00000026431)	zdhhc15b (ENSLBEG00000026448)	fgf16 (ENSLBEG00000026470)	atrx (ENSLBEG00000026519)	kif3a (ENSLBEG00000026602)	ENSLBEG00000026653	kctd16a (ENSLBEG00000026659) #17	nr3c1 (ENSLBEG00000026667) #22	fgf1a (ENSLBEG00000026702)	NDFIP1 (ENSLBEG00000026749) #26	gnpda1 (ENSLBEG00000026769) #28	hspa4b (ENSLBEG00000026794)	uqcrq (ENSLBEG00000026868)	gdf9 (ENSLBEG00000026878)	ENSLBEG00000026884	septin8b (ENSLBEG00000026898)	ccng1 (ENSLBEG00000026921)	nudcd2 (ENSLBEG00000026933)	gabra6a (ENSLBEG00000026941)
Eupecaria_B	ANCESTRAL SPECIES	13	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT01000000221770	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Eupecaria_C	ANCESTRAL SPECIES	12	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT01000000221770	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	14	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT01000000221770	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
European seabass	MODERN SPECIES	12	si:ch211-153b23.5 (ENSDLAG00005009113)	si:ch211-153b23.4 (ENSDLAG00005009098)	ENSDLAG00005009090	irg1l (ENSDLAG00005009077)	RLIM (ENSDLAG00005026581)	ENSDLAG00005030037	abcb7 (ENSDLAG00005007497)	UPRT (ENSDLAG00005029932)	zdhhc15b (ENSDLAG00005007210)	fgf16 (ENSDLAG00005007185)	atrx (ENSDLAG00005005529)	ENSDLAG00005005498	kif3a (ENSDLAG00005005336)	ENSDLAG00005005327 #13	kctd16a (ENSDLAG00005005323) #17	nr3c1 (ENSDLAG00005005166) #22	ENSDLAG00005005071 #26	fgf1a (ENSDLAG00005034772)	gnpda1 (ENSDLAG00005005010) #28	hspa4b (ENSDLAG00005001647)	ENSDLAG00005001454	ENSDLAG00005001304	nudcd2 (ENSDLAG00005001225)	gabra6a (ENSDLAG00005018177)	gabrb2a (ENSDLAG00005018021)	ENSDLAG00005017903	ENSDLAG00005026618	atp7a (ENSDLAG00005017297)	sfxn1 (ENSDLAG00005017244)	ppp2caa (ENSDLAG00005026994)	si:ch1073-44g3.1 (ENSDLAG00005017178)
Large yellow croaker	MODERN SPECIES		si:ch211-153b23.4 (ENSLCRG00005011620)	ENSLCRG00005011619	irg1l (ENSLCRG00005011616)	glod5 (ENSLCRG00005011615)	RLIM (ENSLCRG00005011614)	NEXMIF (ENSLCRG00005011613)	abcb7 (ENSLCRG00005010171)	zdhhc15b (ENSLCRG00005010107)	uprt (ENSLCRG00005010100)	fgf16 (ENSLCRG00005010099)	atrx (ENSLCRG00005007019)	ENSLCRG00005006975	kif3a (ENSLCRG00005006801)	ENSLCRG00005006795 #13	kctd16a (ENSLCRG00005006794) #17	nr3c1 (ENSLCRG00005006669) #22	fgf1a (ENSLCRG00005006666)	NDFIP1 (ENSLCRG00005006665) #26	gnpda1 (ENSLCRG00005006664) #28	hspa4b (ENSLCRG00005000419)	uqcrq (ENSLCRG00005018037)	gdf9 (ENSLCRG00005018036)	ENSLCRG00005018034	septin8b (ENSLCRG00005016934)	ccng1 (ENSLCRG00005016925)	nudcd2 (ENSLCRG00005016924)	gabra6a (ENSLCRG00005016921)	gabrb2a (ENSLCRG00005016896)	ATP10B (ENSLCRG00005016882)	ENSLCRG00005016875	atp7a (ENSLCRG00005016843)
Gilthead seabream	MODERN SPECIES	9	si:ch211-153b23.4 (ENSSAUG00010015029)	ENSSAUG00010015031	irg1l (ENSSAUG00010015033)	glod5 (ENSSAUG00010015035)	RLIM (ENSSAUG00010015036)	NEXMIF (ENSSAUG00010015037)	abcb7 (ENSSAUG00010015066)	uprt (ENSSAUG00010016912)	zdhhc15b (ENSSAUG00010016921)	fgf16 (ENSSAUG00010016926)	atrx (ENSSAUG00010016937)	ENSSAUG00010017650	kif3a (ENSSAUG00010017659)	ENSSAUG00010018155	kctd16a (ENSSAUG00010018158) #17	nr3c1 (ENSSAUG00010018162) #22	fgf1a (ENSSAUG00010018247)	NDFIP1 (ENSSAUG00010018254) #26	gnpda1 (ENSSAUG00010018262) #28	hspa4b (ENSSAUG00010018272)	UQCRQ (ENSSAUG00010018590)	gdf9 (ENSSAUG00010018591)	ENSSAUG00010002572	septin8b (ENSSAUG00010002596)	ccng1 (ENSSAUG00010002646)	nudcd2 (ENSSAUG00010002658)	gabra6a (ENSSAUG00010002674)	gabrb2a (ENSSAUG00010002699)	ATP10B (ENSSAUG00010002957)	ENSSAUG00010004536	atp7a (ENSSAUG00010004556)
Perciformes	ANCESTRAL SPECIES	13	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Perciformes_a	ANCESTRAL SPECIES	11	ENSGT00390000001775.A	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Pike perch	MODERN SPECIES	36	ENSSLUG00000019337	si:ch211-153b23.5 (ENSSLUG00000019340)	si:ch211-153b23.4 (ENSSLUG00000019345)	irg1l (ENSSLUG00000019357)	glod5 (ENSSLUG00000019362)	RLIM (ENSSLUG00000019366)	abcb7 (ENSSLUG00000019408)	uprt (ENSSLUG00000020403)	zdhhc15b (ENSSLUG00000020424)	fgf16 (ENSSLUG00000020430)	atrx (ENSSLUG00000020556)	kif3a (ENSSLUG00000022215)	ENSSLUG00000022249 #13	ENSSLUG00000022250	kctd16a (ENSSLUG00000022251) #17	nr3c1 (ENSSLUG00000022260) #22	fgf1a (ENSSLUG00000001529)	NDFIP1 (ENSSLUG00000001572) #26	gnpda1 (ENSSLUG00000001587) #28	hspa4b (ENSSLUG00000001918)	uqcrq (ENSSLUG00000002657)	gdf9 (ENSSLUG00000002659)	septin8b (ENSSLUG00000002707)	ENSSLUG00000004342	ccng1 (ENSSLUG00000004344)	nudcd2 (ENSSLUG00000004353)	gabra6a (ENSSLUG00000004367)	gabrb2a (ENSSLUG00000004401)	ATP10B (ENSSLUG00000004497)	ENSSLUG00000004658	atp7a (ENSSLUG00000004780)
Channel bull blenny	MODERN SPECIES	1	si:ch211-153b23.4 (ENSCGOG00000013017)	si:ch211-153b23.5 (ENSCGOG00000013011)	ENSCGOG00000013005	irg1l (ENSCGOG00000013000)	glod5 (ENSCGOG00000012993)	RLIM (ENSCGOG00000012990)	NEXMIF (ENSCGOG00000012988)	abcb7 (ENSCGOG00000012317)	uprt (ENSCGOG00000012269)	zdhhc15b (ENSCGOG00000012232)	fgf16 (ENSCGOG00000012224)	atrx (ENSCGOG00000011030)	kif3a (ENSCGOG00000009757)	ENSCGOG00000009662 #13	kctd16a (ENSCGOG00000009660) #17	nr3c1 (ENSCGOG00000009555) #22	fgf1a (ENSCGOG00000009551)	NDFIP1 (ENSCGOG00000009548) #26	gnpda1 (ENSCGOG00000009491) #28	hspa4b (ENSCGOG00000007963)	uqcrq (ENSCGOG00000007938)	gdf9 (ENSCGOG00000007936)	ENSCGOG00000007935	septin8b (ENSCGOG00000005538)	nudcd2 (ENSCGOG00000005391)	ccng1 (ENSCGOG00000005424)	gabra6a (ENSCGOG00000005387)	gabrb2a (ENSCGOG00000005240)	ENSCGOG00000005226	ENSCGOG00000005221	atp7a (ENSCGOG00000003847)
Cottioidei	ANCESTRAL SPECIES	9	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Stickleback	MODERN SPECIES	3	ENSGACG00000018251	irg1l (ENSGACG00000018250)	si:ch211-153b23.5 (ENSGACG00000018249)	ENSGACG00000018246	irg1l (ENSGACG00000018245)	RLIM (ENSGACG00000018243)	NEXMIF (ENSGACG00000018242)	abcb7 (ENSGACG00000018231)	uprt (ENSGACG00000018229)	zdhhc15b (ENSGACG00000018224)	fgf16 (ENSGACG00000018221)	atrx (ENSGACG00000018218)	kif3a (ENSGACG00000018214)	ENSGACG00000018213	kctd16a (ENSGACG00000018211) #17	nr3c1 (ENSGACG00000018209) #22	fgf1a (ENSGACG00000018207)	gnpda1 (ENSGACG00000018200) #28	hspa4b (ENSGACG00000018188)	uqcrq (ENSGACG00000018187)	gdf9 (ENSGACG00000018186)	septin8b (ENSGACG00000018181)	ccng1 (ENSGACG00000018175)	nudcd2 (ENSGACG00000018171)	gabra6a (ENSGACG00000018169)	gabrb2a (ENSGACG00000018167)	ENSGACG00000018164	atp7a (ENSGACG00000018161)	sfxn1 (ENSGACG00000018159)	ppp2caa (ENSGACG00000018152)	atp5po (ENSGACG00000018149)
Lumpfish	MODERN SPECIES	1	si:ch211-153b23.5 (ENSCLMG00005018930)	si:ch211-153b23.4 (ENSCLMG00005018931)	ENSCLMG00005018932	irg1l (ENSCLMG00005018933)	glod5 (ENSCLMG00005018934)	RLIM (ENSCLMG00005018935)	NEXMIF (ENSCLMG00005018937)	abcb7 (ENSCLMG00005018953)	uprt (ENSCLMG00005020068)	zdhhc15b (ENSCLMG00005020076)	fgf16 (ENSCLMG00005020121)	atrx (ENSCLMG00005020135)	kif3a (ENSCLMG00005020731)	SH3RF2 (ENSCLMG00005020757) #13	kctd16a (ENSCLMG00005020759) #17	nr3c1 (ENSCLMG00005020761) #22	fgf1a (ENSCLMG00005020763)	NDFIP1 (ENSCLMG00005020782) #26	gnpda1 (ENSCLMG00005020783) #28	hspa4b (ENSCLMG00005020790)	gdf9 (ENSCLMG00005021126)	ENSCLMG00005021127	septin8b (ENSCLMG00005021131)	ccng1 (ENSCLMG00005021134)	nudcd2 (ENSCLMG00005021135)	gabra6a (ENSCLMG00005021137)	gabrb2a (ENSCLMG00005021142)	ATP10B (ENSCLMG00005021174)	ENSCLMG00005021176	atp7a (ENSCLMG00005001792)	sfxn1 (ENSCLMG00005007551)
Percomorphaceae_D	ANCESTRAL SPECIES	17	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT01000000221770	ENSGT00940000155763.b	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Anabantaria	ANCESTRAL SPECIES	15	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159568	ENSGT01030000234641.b.a.b.a.b
Anabantoidei	ANCESTRAL SPECIES	11	ENSGT00390000015364.a.b.a	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159568	ENSGT01030000234641.b.a.b.a.b
Climbing perch	MODERN SPECIES	1	ENSATEG00000004956	irg1l (ENSATEG00000005005)	si:ch211-153b23.5 (ENSATEG00000005023)	irg1l (ENSATEG00000005032)	glod5 (ENSATEG00000027212)	RLIM (ENSATEG00000005057)	NEXMIF (ENSATEG00000005080)	abcb7 (ENSATEG00000005099)	UPRT (ENSATEG00000005165)	zdhhc15b (ENSATEG00000005184)	fgf16 (ENSATEG00000005208)	atrx (ENSATEG00000005224)	kif3a (ENSATEG00000005239)	ENSATEG00000028880 #13	kctd16a (ENSATEG00000005310) #17	nr3c1 (ENSATEG00000005344) #22	fgf1a (ENSATEG00000005352)	ENSATEG00000005358 #26	gnpda1 (ENSATEG00000005381) #28	hspa4b (ENSATEG00000005390)	ENSATEG00000027917	ENSATEG00000005477	SOWAHA (ENSATEG00000005516)	ENSATEG00000005522	ccng1 (ENSATEG00000029682)	nudcd2 (ENSATEG00000029930)	gabra6a (ENSATEG00000005602)	gabrb2a (ENSATEG00000005873)	ENSATEG00000006064	atp7a (ENSATEG00000006145)	sfxn1 (ENSATEG00000006251)
Siamese fighting fish	MODERN SPECIES	1	si:ch211-153b23.4 (ENSBSLG00000017292)	si:ch211-153b23.5 (ENSBSLG00000017319)	irg1l (ENSBSLG00000017329)	ENSBSLG00000017392	glod5 (ENSBSLG00000017418)	RLIM (ENSBSLG00000017450)	NEXMIF (ENSBSLG00000017475)	abcb7 (ENSBSLG00000017558)	uprt (ENSBSLG00000018716)	zdhhc15b (ENSBSLG00000018734)	fgf16 (ENSBSLG00000019266)	ENSBSLG00000019285	kif3a (ENSBSLG00000020094)	ENSBSLG00000020440 #13	kctd16a (ENSBSLG00000020444) #17	nr3c1 (ENSBSLG00000020446) #22	fgf1a (ENSBSLG00000020451)	NDFIP1 (ENSBSLG00000020477) #26	gnpda1 (ENSBSLG00000020486) #28	hspa4b (ENSBSLG00000020496)	gdf9 (ENSBSLG00000020635)	ENSBSLG00000020642	septin8b (ENSBSLG00000020671)	ccng1 (ENSBSLG00000020787)	nudcd2 (ENSBSLG00000008259)	gabrb2a (ENSBSLG00000008315)	ATP10B (ENSBSLG00000008563)	atp7a (ENSBSLG00000009197)	sfxn1 (ENSBSLG00000009813)	ppp2caa (ENSBSLG00000009925)	atp5po (ENSBSLG00000009959)
Zig-zag eel	MODERN SPECIES	1	si:ch211-153b23.4 (ENSMAMG00000028420)	si:ch211-153b23.5 (ENSMAMG00000009307)	si:ch211-153b23.4 (ENSMAMG00000028589)	irg1l (ENSMAMG00000009264)	glod5 (ENSMAMG00000028555)	RLIM (ENSMAMG00000009251)	NEXMIF (ENSMAMG00000009248)	abcb7 (ENSMAMG00000009198)	UPRT (ENSMAMG00000009183)	zdhhc15b (ENSMAMG00000009160)	fgf16 (ENSMAMG00000024649)	atrx (ENSMAMG00000009118)	kif3a (ENSMAMG00000009053)	ENSMAMG00000009029	kctd16a (ENSMAMG00000009008) #17	nr3c1 (ENSMAMG00000008984) #22	fgf1a (ENSMAMG00000025470)	ENSMAMG00000025853 #26	gnpda1 (ENSMAMG00000008865) #28	hspa4b (ENSMAMG00000008809)	ENSMAMG00000008800	ENSMAMG00000008784	ENSMAMG00000008775	ENSMAMG00000008748	ccng1 (ENSMAMG00000008739)	nudcd2 (ENSMAMG00000025206)	gabra6a (ENSMAMG00000008625)	gabrb2a (ENSMAMG00000008597)	ENSMAMG00000025757	ENSMAMG00000008496	atp7a (ENSMAMG00000008478)
Carangaria	ANCESTRAL SPECIES	15	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT01000000221770	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Carangaria_A	ANCESTRAL SPECIES	22	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Seriola	ANCESTRAL SPECIES	22	ENSGT00390000003706.a.b.a	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b.h	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Greater amberjack	MODERN SPECIES	67	zgc:174917 (ENSSDUG00000006680)	si:ch211-153b23.4 (ENSSDUG00000006671)	ENSSDUG00000006631	irg1l (ENSSDUG00000006609)	glod5 (ENSSDUG00000006599)	RLIM (ENSSDUG00000006593)	NEXMIF (ENSSDUG00000006587)	abcb7 (ENSSDUG00000006546)	uprt (ENSSDUG00000006519)	zdhhc15b (ENSSDUG00000006490)	fgf16 (ENSSDUG00000006371)	atrx (ENSSDUG00000006261)	kif3a (ENSSDUG00000006206)	ENSSDUG00000006193 #13	kctd16a (ENSSDUG00000006177) #17	nr3c1 (ENSSDUG00000006165) #22	fgf1a (ENSSDUG00000006152)	NDFIP1 (ENSSDUG00000006132) #26	gnpda1 (ENSSDUG00000006115) #28	hspa4b (ENSSDUG00000006074)	uqcrq (ENSSDUG00000006065)	gdf9 (ENSSDUG00000006058)	ENSSDUG00000006044	septin8b (ENSSDUG00000006014)	ccng1 (ENSSDUG00000005994)	nudcd2 (ENSSDUG00000005978)	gabra6a (ENSSDUG00000005828)	gabrb2a (ENSSDUG00000005532)	ATP10B (ENSSDUG00000005453)	ENSSDUG00000005431	atp7a (ENSSDUG00000005325)
Yellowtail amberjack	MODERN SPECIES	2581													kif3a (ENSSLDG00000013544)	ENSSLDG00000013597 #13	kctd16a (ENSSLDG00000013616) #17	nr3c1 (ENSSLDG00000013625) #22	fgf1a (ENSSLDG00000013643)	NDFIP1 (ENSSLDG00000013654) #26	gnpda1 (ENSSLDG00000013669) #28	hspa4b (ENSSLDG00000013697)	uqcrq (ENSSLDG00000013761)	gdf9 (ENSSLDG00000013771)	ENSSLDG00000013788	septin8b (ENSSLDG00000013820)	nudcd2 (ENSSLDG00000013862)	ccng1 (ENSSLDG00000013881)	gabra6a (ENSSLDG00000013893)	gabrb2a (ENSSLDG00000013927)	ENSSLDG00000014010	ENSSLDG00000014146	atp7a (ENSSLDG00000014170)
Barramundi perch	MODERN SPECIES	63	zgc:174917 (ENSLCAG00010015082)	si:ch211-153b23.5 (ENSLCAG00010015088)	si:ch211-153b23.4 (ENSLCAG00010015092)	irg1l (ENSLCAG00010015095)	glod5 (ENSLCAG00010015102)	RLIM (ENSLCAG00010015110)	NEXMIF (ENSLCAG00010015113)	abcb7 (ENSLCAG00010015133)	uprt (ENSLCAG00010015177)	zdhhc15b (ENSLCAG00010015194)	fgf16 (ENSLCAG00010015236)	atrx (ENSLCAG00010015255)	kif3a (ENSLCAG00010015334)	ENSLCAG00010015355 #13	kctd16a (ENSLCAG00010015379) #17	nr3c1 (ENSLCAG00010015384) #22	fgf1a (ENSLCAG00010015396)	NDFIP1 (ENSLCAG00010015407) #26	gnpda1 (ENSLCAG00010015430) #28	hspa4b (ENSLCAG00010015480)	uqcrq (ENSLCAG00010015576)	gdf9 (ENSLCAG00010015580)	septin8b (ENSLCAG00010015584)	ENSLCAG00010015598	ccng1 (ENSLCAG00010015600)	nudcd2 (ENSLCAG00010015601)	gabra6a (ENSLCAG00010015604)	gabrb2a (ENSLCAG00010015614)	ATP10B (ENSLCAG00010015645)	ENSLCAG00010015662	atp7a (ENSLCAG00010015678)
Pleuronectoidei	ANCESTRAL SPECIES	18	ENSGT00390000015364.a.b.a	ENSGT00390000015364.a.b.b	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D.b	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902.c	ENSGT01000000221770	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491.ib	ENSGT00940000159568
Tongue sole	MODERN SPECIES	6	si:ch211-153b23.4 (ENSCSEG00000014838)	ENSCSEG00000014853	irg1l (ENSCSEG00000014865)	glod5 (ENSCSEG00000014879)	RLIM (ENSCSEG00000014889)	NEXMIF (ENSCSEG00000014901)	abcb7 (ENSCSEG00000014908)	uprt (ENSCSEG00000014930)	zdhhc15b (ENSCSEG00000014934)	fgf16 (ENSCSEG00000014967)	atrx (ENSCSEG00000014977)	kif3a (ENSCSEG00000015042)	ENSCSEG00000015095	ENSCSEG00000015104	kctd16a (ENSCSEG00000015107) #17	nr3c1 (ENSCSEG00000015111) #22	fgf1a (ENSCSEG00000015132)	NDFIP1 (ENSCSEG00000015181) #26	gnpda1 (ENSCSEG00000015197) #28	gnpda1 (ENSCSEG00000015205) #28	hspa4b (ENSCSEG00000015218)	septin8b (ENSCSEG00000015261)	gdf9 (ENSCSEG00000015272)	ENSCSEG00000015280	ENSCSEG00000015282	nudcd2 (ENSCSEG00000015289)	ccng1 (ENSCSEG00000015284)	gabra6a (ENSCSEG00000015301)	gabrb2a (ENSCSEG00000015327)	ENSCSEG00000015344	ENSCSEG00000015349
Turbot	MODERN SPECIES	4	zgc:174917 (ENSSMAG00000010101)	si:ch211-153b23.5 (ENSSMAG00000026559)	si:ch211-153b23.4 (ENSSMAG00000010067)	irg1l (ENSSMAG00000005426)	RLIM (ENSSMAG00000021649)	NEXMIF (ENSSMAG00000005369)	abcb7 (ENSSMAG00000005305)	UPRT (ENSSMAG00000005295)	zdhhc15b (ENSSMAG00000005256)	fgf16 (ENSSMAG00000005218)	atrx (ENSSMAG00000005192)	ENSSMAG00000005183	kif3a (ENSSMAG00000005060)	ENSSMAG00000005000 #13	kctd16a (ENSSMAG00000004996) #17	nr3c1 (ENSSMAG00000004972) #22	fgf1a (ENSSMAG00000004967)	ENSSMAG00000025173 #26	gnpda1 (ENSSMAG00000004936) #28	hspa4b (ENSSMAG00000004855)	ENSSMAG00000004844	ENSSMAG00000004832	ENSSMAG00000022620	ENSSMAG00000004751	nudcd2 (ENSSMAG00000028352)	ccng1 (ENSSMAG00000029181)	gabra6a (ENSSMAG00000004712)	gabrb2a (ENSSMAG00000004657)	ENSSMAG00000004529	ENSSMAG00000004489	atp7a (ENSSMAG00000004438)
Tiger tail seahorse	MODERN SPECIES	175	ENSHCOG00000006073	ENSHCOG00000006047	ENSHCOG00000006011	glod5 (ENSHCOG00000006003)	RLIM (ENSHCOG00000000190)	NEXMIF (ENSHCOG00000005974)	abcb7 (ENSHCOG00000005956)	uprt (ENSHCOG00000005919)	zdhhc15b (ENSHCOG00000005904)	fgf16 (ENSHCOG00000005892)	atrx (ENSHCOG00000005865)	kif3a (ENSHCOG00000005671)	ENSHCOG00000005635	ENSHCOG00000005628	kctd16a (ENSHCOG00000005617) #17	nr3c1 (ENSHCOG00000005606) #22	fgf1a (ENSHCOG00000005595)	NDFIP1 (ENSHCOG00000005534) #26	gnpda1 (ENSHCOG00000005515) #28	hspa4b (ENSHCOG00000005495)	uqcrq (ENSHCOG00000005457)	gdf9 (ENSHCOG00000005449)	ENSHCOG00000005441	septin8b (ENSHCOG00000005437)	ccng1 (ENSHCOG00000005415)	gabra6a (ENSHCOG00000005395)	nudcd2 (ENSHCOG00000005388)	gabrb2a (ENSHCOG00000005378)	ENSHCOG00000005367	ENSHCOG00000000164	atp7a (ENSHCOG00000000841)
Pinecone sodierfish	MODERN SPECIES	1	zgc:174917 (ENSMMDG00005008065)	si:ch211-153b23.5 (ENSMMDG00005008066)	si:ch211-153b23.4 (ENSMMDG00005008068)	irg1l (ENSMMDG00005008072)	glod5 (ENSMMDG00005008078)	RLIM (ENSMMDG00005008081)	NEXMIF (ENSMMDG00005008082)	abcb7 (ENSMMDG00005008126)	uprt (ENSMMDG00005009648)	zdhhc15b (ENSMMDG00005009664)	fgf16 (ENSMMDG00005009699)	atrx (ENSMMDG00005009742)	kif3a (ENSMMDG00005012985)	ENSMMDG00005013694	kctd16a (ENSMMDG00005013696) #17	nr3c1 (ENSMMDG00005013698) #22	fgf1a (ENSMMDG00005013782)	NDFIP1 (ENSMMDG00005013785) #26	gnpda1 (ENSMMDG00005013790) #28	hspa4b (ENSMMDG00005013815)	gdf9 (ENSMMDG00005014599)	ENSMMDG00005014601	septin8b (ENSMMDG00005014605)	ccng1 (ENSMMDG00005014612)	nudcd2 (ENSMMDG00005014614)	gabra6a (ENSMMDG00005014620)	gabrb2a (ENSMMDG00005014669)	ATP10B (ENSMMDG00005014682)	ENSMMDG00005014697	atp7a (ENSMMDG00005014714)	sfxn1 (ENSMMDG00005015666)
Cod	MODERN SPECIES	1	si:ch211-153b23.4 (ENSGMOG00000006012)	ENSGMOG00000034758	irg1l (ENSGMOG00000006039)	zgc:174917 (ENSGMOG00000025367)	irg1l (ENSGMOG00000031965)	glod5 (ENSGMOG00000005960)	RLIM (ENSGMOG00000029618)	RLIM (ENSGMOG00000031968)	NEXMIF (ENSGMOG00000020192)	UPRT (ENSGMOG00000005875)	zdhhc15b (ENSGMOG00000005836)	ENSGMOG00000005751	kif3a (ENSGMOG00000005722)	ENSGMOG00000022664	kctd16a (ENSGMOG00000005691) #17	nr3c1 (ENSGMOG00000005668) #22	fgf1a (ENSGMOG00000005658)	ENSGMOG00000024027 #26	gnpda1 (ENSGMOG00000005643) #28	hspa4b (ENSGMOG00000005602)	ENSGMOG00000032759	ENSGMOG00000030469	ENSGMOG00000005532	ENSGMOG00000005450	ENSGMOG00000020191	urp1 (ENSGMOG00000026552)	clic2 (ENSGMOG00000005434)	ENSGMOG00000005419	ocrl (ENSGMOG00000005366)	ENSGMOG00000023833	xpnpep2 (ENSGMOG00000005338)
Protacanthopterygii	ANCESTRAL SPECIES	62	ENSGT00940000155085	ENSGT00440000040163	ENSGT00940000157209	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00940000158983	ENSGT00940000160481	ENSGT00390000006915.c.d.a	ENSGT00940000167495	ENSGT00940000159580	ENSGT00940000156123.a.b	ENSGT00940000178948	ENSGT00940000156386	ENSGT00940000160067 #13	ENSGT00940000156071.a #17	ENSGT00940000156385.a #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b #26	ENSGT00390000014316.c.b #28	ENSGT00940000156067.g.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j	ENSGT00940000154726	ENSGT00390000001644	ENSGT00940000156722.b	ENSGT00940000154245.A.jb.b	ENSGT00940000159531	ENSGT00940000159491	ENSGT00940000159568
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	293												ENSGT00940000178948.b	ENSGT00940000156386.m	ENSGT00940000155875.s.a.a	ENSGT00940000156071.a.g #17	ENSGT00940000156385.a.e #22	ENSGT00390000012721.a.g.b.d #26	ENSGT00390000014316.c.b.e.b #28	ENSGT00940000156067.g.b.e.a	ENSGT00390000004029.d	ENSGT00940000159784.l	ENSGT00940000156068.j.e	ENSGT00940000154726.rb.b	ENSGT00390000001644	ENSGT00940000156722.b.c	ENSGT00940000154245.A.jb.b	ENSGT00940000159531.f	ENSGT00940000159491	ENSGT00940000159568.k.a	ENSGT01030000234641.b.a.b.a.b.q.b	ENSGT00550000074618.a.a.lb.a.d
Huchen	MODERN SPECIES	2625															kctd16a (ENSHHUG00000018924) #17	nr3c1 (ENSHHUG00000018930) #22	NDFIP1 (ENSHHUG00000019037) #26	gnpda1 (ENSHHUG00000018988) #28	hspa4b (ENSHHUG00000019155)	uqcrq (ENSHHUG00000019549)
Salmoninae_a	ANCESTRAL SPECIES	41	ENSGT00940000163673.d	ENSGT00940000163331.a.b.e	ENSGT00940000155128.a.a.b.c.a	ENSGT00940000155085.c	ENSGT00440000040163.e	ENSGT00940000157209.f	ENSGT00940000158229.g	ENSGT00530000063872.A.c	ENSGT00940000158983	ENSGT00940000160481.h	ENSGT00390000006915.c.d.a.f.a	ENSGT00940000178948.b	ENSGT00940000156386.m	ENSGT00940000155875.s.a.a	ENSGT00940000156071.a.g #17	ENSGT00940000156385.a.e #22	ENSGT00390000012721.a.g.b.d #26	ENSGT00390000014316.c.b.e.b #28	ENSGT00940000156067.g.b.e.a	ENSGT00390000004029.d	ENSGT00940000159784.l	ENSGT00940000156068.j.e	ENSGT00940000154726.rb.b	ENSGT00390000001644	ENSGT00940000156722.b.c	ENSGT00940000154245.A.kb.d
Oncorhynchus	ANCESTRAL SPECIES	34	ENSGT00940000155128.a.a.b.c.a	ENSGT00940000155085.c	ENSGT00440000040163.e	ENSGT00940000157209.f	ENSGT00940000158229.g	ENSGT00530000063872.A.c	ENSGT00940000158983	ENSGT00940000160481.h	ENSGT00390000006915.c.d.a.e	ENSGT00940000167495.d	ENSGT00940000159580.r.a	ENSGT00940000178948.b.b	ENSGT00940000156386.m	ENSGT00940000155875.s.a.a	ENSGT00940000156071.a.g #17	ENSGT00940000156385.a.e #22	ENSGT01030000237240	ENSGT00390000012721.a.g.b.d #26	ENSGT00390000014316.c.b.e.b #28	ENSGT00940000156067.g.b.e.a	ENSGT00390000004029.d	ENSGT00940000159784.l	ENSGT00940000156068.j.e	ENSGT00940000154726.rb.b	ENSGT00390000001644	ENSGT00940000156722.b.c	ENSGT00940000154245.A.jb.b.b	ENSGT00940000159531.f	ENSGT00940000159491.fb	ENSGT00940000159568.k.b	ENSGT01030000234641.b.a.b.a.b.q.a
Rainbow trout	MODERN SPECIES	23	nsdhl (ENSOMYG00000043339)	ENSOMYG00000050473	fut11 (ENSOMYG00000043348)	ENSOMYG00000048155	plp1a (ENSOMYG00000043374)	ENSOMYG00000043389	nlgn3a (ENSOMYG00000048600)	ENSOMYG00000072202	ENSOMYG00000042618	kif3a (ENSOMYG00000042606)	ENSOMYG00000042598	kctd16a (ENSOMYG00000042592) #17	ENSOMYG00000042508	ENSOMYG00000042482 #26	gnpda1 (ENSOMYG00000042464) #28	nr3c1 (ENSOMYG00000042542) #22	ENSOMYG00000038105	ENSOMYG00000037400	ENSOMYG00000049190	ENSOMYG00000052219	ccng1 (ENSOMYG00000037382)	nudcd2 (ENSOMYG00000066428)	gabra6a (ENSOMYG00000058409)	gabrb2a (ENSOMYG00000048690)	ENSOMYG00000050877	ENSOMYG00000037031	atp7a (ENSOMYG00000036926)	ENSOMYG00000072484	sfxn1 (ENSOMYG00000074939)	ppp2caa (ENSOMYG00000036871)	ENSOMYG00000036797
Oncorhynchus_a	ANCESTRAL SPECIES	34	ENSGT00940000158211.g.a.b	ENSGT00940000159611.g.a.b	ENSGT00940000163673.c.b.a	ENSGT00940000163331.a.b.e	ENSGT00940000175313	ENSGT00530000063872.A.c	ENSGT00940000158983	ENSGT00940000160481.h	ENSGT00390000006915.c.d.a.e	ENSGT00940000167495.d	ENSGT00940000159580.q	ENSGT00940000178948.b.b	ENSGT00940000156386.m	ENSGT00940000155875.s.a.a	ENSGT00940000156071.a.g #17	ENSGT00940000156385.a.e #22	ENSGT01030000237240	ENSGT00390000012721.a.g.b.d #26	ENSGT00390000014316.c.b.e.b #28	ENSGT00940000156067.g.b.e.a	ENSGT00390000004029.d	ENSGT00940000159784.l	ENSGT00940000156068.j.e	ENSGT00940000154726.rb.b	ENSGT00390000001644	ENSGT00940000156722.b.c	ENSGT00940000154245.A.jb.b.b	ENSGT00940000159531.f	ENSGT00940000159491.fb	ENSGT00940000159568.k.b	ENSGT01030000234641.b.a.b.a.b.q.a
Coho salmon	MODERN SPECIES	6	fut11 (ENSOKIG00005035034)	RAB9B (ENSOKIG00005034999)	ENSOKIG00005034988	plp1a (ENSOKIG00005034940)	ENSOKIG00005034888	ENSOKIG00005034878	nlgn3a (ENSOKIG00005034853)	ENSOKIG00005034842	ENSOKIG00005034639	ENSOKIG00005034615	ENSOKIG00005034608	ENSOKIG00005034586	kif3a (ENSOKIG00005033698)	ENSOKIG00005033602	kctd16a (ENSOKIG00005033589) #17	nr3c1 (ENSOKIG00005033418) #22	NDFIP1 (ENSOKIG00005033386) #26	gnpda1 (ENSOKIG00005033314) #28	hspa4b (ENSOKIG00005031533)	gdf9 (ENSOKIG00005031422)	SEPTIN8 (ENSOKIG00005030725)	ccng1 (ENSOKIG00005030627)	nudcd2 (ENSOKIG00005030598)	gabra6a (ENSOKIG00005030584)	gabrb2a (ENSOKIG00005029890)	ENSOKIG00005029838	ENSOKIG00005029824	ENSOKIG00005029818	atp7a (ENSOKIG00005024424)	ENSOKIG00005024214	sfxn1 (ENSOKIG00005024192)
Chinook salmon	MODERN SPECIES	22	nr1i2 (ENSOTSG00005000476)	ENSOTSG00005000479	ENSOTSG00005000487	zgc:113337 (ENSOTSG00005000493)	GPR89B (ENSOTSG00005000500)	pdzk1 (ENSOTSG00005000523)	ENSOTSG00005000528	NALF1 (ENSOTSG00005000532)	abhd13 (ENSOTSG00005000537)	ENSOTSG00005000541	ENSOTSG00005000545	jade1 (ENSOTSG00005000552)	nsd2 (ENSOTSG00005000633)	letm1 (ENSOTSG00005000653)	kctd16a (ENSOTSG00005000993) #17	nr3c1 (ENSOTSG00005000998) #22	ENSOTSG00005001040	NDFIP1 (ENSOTSG00005001050) #26	gnpda1 (ENSOTSG00005001288) #28	hspa4b (ENSOTSG00005001398)	uqcrq (ENSOTSG00005013553)	gdf9 (ENSOTSG00005013554)	septin8b (ENSOTSG00005013555)	ccng1 (ENSOTSG00005013556)	nudcd2 (ENSOTSG00005013558)	gabra6a (ENSOTSG00005013559)	ENSOTSG00005013562	IRS2 (ENSOTSG00005013565)	ENSOTSG00005013566	ENSOTSG00005013569	ENSOTSG00005013573
Salmo	ANCESTRAL SPECIES	83													ENSGT00940000156386.m	ENSGT00940000155875.s.a.a	ENSGT00940000156071.a.g #17	ENSGT00940000156385.a.e #22	ENSGT00390000012721.a.g.b.d #26	ENSGT00390000014316.c.b.e.b #28	ENSGT00940000156067.g.b.e.a	ENSGT00390000004029.d	ENSGT00940000159784.l	ENSGT00950000183003.a.a.a.a.b.d.n	ENSGT00940000156068.j.e	ENSGT00940000154726.rb.b	ENSGT00390000001644	ENSGT00940000156722.b.c	ENSGT00940000154245.A.jb.b.d	ENSGT00940000159531.f	ENSGT00940000159491	ENSGT00940000159568.k.b	ENSGT01030000234641.b.a.b.a.b.q.a
Atlantic salmon	MODERN SPECIES	28	ENSSSAG00000096829	ENSSSAG00000103320	ENSSSAG00000041797	hmmr (ENSSSAG00000041733)	cyfip2 (ENSSSAG00000015924)	ENSSSAG00000015374	itk (ENSSSAG00000041613)	ENSSSAG00000041995	ENSSSAG00000092242	ENSSSAG00000041820	gria1a (ENSSSAG00000106340)	13b2 (ENSSSAG00000068142)	ENSSSAG00000068150	ENSSSAG00000068195	kctd16a (ENSSSAG00000086914) #17	nr3c1 (ENSSSAG00000121753) #22	fgf1a (ENSSSAG00000037964)	ENSSSAG00000038700 #26	gnpda1 (ENSSSAG00000044271) #28	hspa4b (ENSSSAG00000039557)	ENSSSAG00000044301	ENSSSAG00000042611	ENSSSAG00000053980	ccng1 (ENSSSAG00000102112)	NUDC2 (ENSSSAG00000053984)	gabra6a (ENSSSAG00000053996)	gabrb2a (ENSSSAG00000105666)	ENSSSAG00000054027	ENSSSAG00000054150	atp7a (ENSSSAG00000108486)	sfxn1 (ENSSSAG00000105560)
River trout	MODERN SPECIES	4	gcna (ENSSTUG00000008487)	ENSSTUG00000008511	nsdhl (ENSSTUG00000008522)	ENSSTUG00000008546	fut11 (ENSSTUG00000008630)	RAB9B (ENSSTUG00000008655)	plp1a (ENSSTUG00000008673)	ENSSTUG00000008719	ENSSTUG00000009941	kif3a (ENSSTUG00000009981)	ENSSTUG00000011262	ENSSTUG00000011269	ENSSTUG00000011278	kctd16a (ENSSTUG00000011280) #17	ENSSTUG00000011294	nr3c1 (ENSSTUG00000011302) #22	NDFIP1 (ENSSTUG00000011346) #26	ENSSTUG00000011381	gnpda1 (ENSSTUG00000011406) #28	hspa4b (ENSSTUG00000011561)	uqcrq (ENSSTUG00000013319)	gdf9 (ENSSTUG00000013326)	septin8b (ENSSTUG00000013403)	ccng1 (ENSSTUG00000015693)	nudcd2 (ENSSTUG00000015706)	gabra6a (ENSSTUG00000015727)	gabrb2a (ENSSTUG00000015821)	ATP10B (ENSSTUG00000015967)	ENSSTUG00000016085	atp7a (ENSSTUG00000016187)	sfxn1 (ENSSTUG00000019578)
Salmoninae	ANCESTRAL SPECIES	276	ENSGT00940000155085.c	ENSGT00440000040163.e	ENSGT00940000157209.f	ENSGT00940000158229.g	ENSGT00530000063872.A.c	ENSGT00940000158983	ENSGT00940000160481.h	ENSGT00390000006915.c.d.a.e	ENSGT00940000167495.d	ENSGT00940000159580	ENSGT00940000156123.a.b	ENSGT00940000178948.a	ENSGT00940000156386.n	ENSGT00940000155875.s.a.b	ENSGT00940000156071.a.h #17	ENSGT00940000156385.a.f #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b.c #26	ENSGT00390000014316.c.b.e.a #28	ENSGT00940000156067.g.b.e.b	ENSGT00390000004029.c.a.b	ENSGT00940000156067.g.b.f	ENSGT00390000004029.c.b	ENSGT00940000159784.k	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j.f	ENSGT00940000154726.rb.a	ENSGT00940000172088	ENSGT00940000156722.b.d	ENSGT00940000154245.A.kb.d
Huchen	MODERN SPECIES	2774																nr3c1 (ENSHHUG00000003278) #22	fgf1a (ENSHHUG00000003306)	NDFIP1 (ENSHHUG00000003319) #26	gnpda1 (ENSHHUG00000003499) #28	hspa4b (ENSHHUG00000003517)	uqcrq (ENSHHUG00000004865)	gdf9 (ENSHHUG00000004878)	ENSHHUG00000004888	septin8b (ENSHHUG00000004894)	ccng1 (ENSHHUG00000004980)	ENSHHUG00000005023	ENSHHUG00000005036
Salmoninae_a	ANCESTRAL SPECIES	18	ENSGT00970000194185.B.a	ENSGT00970000194185.B.b	ENSGT00440000040163.f	ENSGT00940000157209.e	ENSGT00940000158229.h	ENSGT00530000063872.A.d	ENSGT00940000160481.g	ENSGT00390000006915.c.d.a.f.b	ENSGT00940000167495.c	ENSGT00940000159580.r.b	ENSGT00940000156123.a.b	ENSGT00940000178948.a	ENSGT00940000156386.n	ENSGT00940000155875.s.a.b	ENSGT00940000156071.a.h #17	ENSGT00940000156385.a.f #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b.c #26	ENSGT00390000014316.c.b.e.a #28	ENSGT00940000156067.g.b.e.b	ENSGT00390000004029.c.a.b	ENSGT00940000156067.g.b.f	ENSGT00390000004029.c.b	ENSGT00940000159784.k	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j.f	ENSGT00940000154726.rb.a	ENSGT00940000172088	ENSGT00940000156722.b.d	ENSGT00940000154245.A.jb.b	ENSGT00940000159531.f
Oncorhynchus	ANCESTRAL SPECIES	45	ENSGT00970000194185.B.b	ENSGT01100000263505.b.b.a.b.a.a.a.b.b.b.d.b	ENSGT00440000040163.f	ENSGT00940000157209.e	ENSGT00940000158229.h	ENSGT00530000063872.A.d	ENSGT00940000160481.g	ENSGT00390000006915.c.d.a.f.b	ENSGT00940000167495.c	ENSGT00940000159580.r.b	ENSGT00940000156123.a.b	ENSGT00940000178948.a	ENSGT00940000156386.n	ENSGT00940000155875.s.a.b	ENSGT00940000156071.a.h #17	ENSGT00940000156385.a.f #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b.c #26	ENSGT00390000014316.c.b.e.a #28	ENSGT00940000156067.g.b.e.b	ENSGT00940000156067.g.b.f	ENSGT00390000004029.c.b	ENSGT00940000159784.k	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j.f	ENSGT00940000154726.rb.a	ENSGT00940000172088	ENSGT00940000156722.b.d	ENSGT00940000154245.A.jb.b.a	ENSGT00940000159491.gb	ENSGT00940000159568.k.a
Rainbow trout	MODERN SPECIES	5	ENSOMYG00000021267	gcna (ENSOMYG00000021270)	ENSOMYG00000021296	ENSOMYG00000021322	ENSOMYG00000021364	plp1a (ENSOMYG00000021382)	pcdh20 (ENSOMYG00000021393)	nlgn3a (ENSOMYG00000025033)	ENSOMYG00000050020	ENSOMYG00000043440	ENSOMYG00000021425	kif3a (ENSOMYG00000021663)	ENSOMYG00000022735	ENSOMYG00000050452	kctd16a (ENSOMYG00000022748) #17	nr3c1 (ENSOMYG00000022763) #22	n4wbp5 (ENSOMYG00000022835) #26	gnpi (ENSOMYG00000022957) #28	hspa4b (ENSOMYG00000023264)	ENSOMYG00000008327	ENSOMYG00000023920	ENSOMYG00000023932	ENSOMYG00000023955	ENSOMYG00000023976	ccng1 (ENSOMYG00000023986)	ENSOMYG00000023997	gabra6a (ENSOMYG00000024007)	gabrb2a (ENSOMYG00000024015)	ENSOMYG00000058132	atp7a (ENSOMYG00000024304)	sfxn1 (ENSOMYG00000025096)
Oncorhynchus_a	ANCESTRAL SPECIES	46	ENSGT00970000194185.B.b	ENSGT01100000263505.b.b.a.b.a.a.a.b.b.b.d.b	ENSGT00440000040163.f	ENSGT00940000157209.e	ENSGT00940000158229.h	ENSGT00530000063872.A.d	ENSGT00940000160481.g	ENSGT00390000006915.c.d.a.f.b	ENSGT00940000167495.c	ENSGT00940000159580.r.b	ENSGT00940000156123.a.b	ENSGT00940000178948.a	ENSGT00940000156386.n	ENSGT00940000155875.s.a.b	ENSGT00940000156071.a.h #17	ENSGT00940000156385.a.f #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b.c #26	ENSGT00390000014316.c.b.e.a #28	ENSGT00940000156067.g.b.e.b	ENSGT00940000156067.g.b.f.a	ENSGT00390000004029.c.b	ENSGT00940000159784.k	ENSGT00950000183003.a.a.a.a.b.d	ENSGT00940000156068.j.f	ENSGT00940000154726.rb.a	ENSGT00940000172088	ENSGT00940000156722.b.d	ENSGT00940000154245.A.jb.b.a	ENSGT00940000159491.gb	ENSGT00940000159568.k.a
Chinook salmon	MODERN SPECIES	13	znf711 (ENSOTSG00005002655)	zgc:66447 (ENSOTSG00005002697)	tmsb1 (ENSOTSG00005002814)	SLC25A53 (ENSOTSG00005002816)	prps1b (ENSOTSG00005002824)	FRMPD3 (ENSOTSG00005002826)	nsdhl (ENSOTSG00005002829)	CETN1 (ENSOTSG00005002837)	gcna (ENSOTSG00005002841)	ENSOTSG00005002843	ENSOTSG00005002848	OGT (ENSOTSG00005002927)	ENSOTSG00005007428	ENSOTSG00005007429	kctd16a (ENSOTSG00005007430) #17	nr3c1 (ENSOTSG00005007431) #22	fgf1a (ENSOTSG00005007432)	NDFIP1 (ENSOTSG00005007434) #26	gnpda1 (ENSOTSG00005007439) #28	hspa4b (ENSOTSG00005007462)	ENSOTSG00005014117	uqcrq (ENSOTSG00005014174)	gdf9 (ENSOTSG00005014177)	ENSOTSG00005014178	septin8b (ENSOTSG00005014180)	ccng1 (ENSOTSG00005014248)	ENSOTSG00005014304	gabra6a (ENSOTSG00005014306)	ENSOTSG00005014307	ENSOTSG00005014310	ENSOTSG00005014311
Coho salmon	MODERN SPECIES	10	nsdhl (ENSOKIG00005049336)	ENSOKIG00005005914	RAB9B (ENSOKIG00005005924)	plp1a (ENSOKIG00005005942)	pcdh20 (ENSOKIG00005005965)	nlgn3a (ENSOKIG00005006011)	ENSOKIG00005006257	ENSOKIG00005006270	ENSOKIG00005006298	ENSOKIG00005006367	ENSOKIG00005006387	kif3a (ENSOKIG00005006479)	ENSOKIG00005008430	kctd16a (ENSOKIG00005008439) #17	ENSOKIG00005008447	nr3c1 (ENSOKIG00005008463) #22	fgf1a (ENSOKIG00005008480)	NDFIP1 (ENSOKIG00005008602) #26	gnpda1 (ENSOKIG00005008508) #28	hspa4b (ENSOKIG00005008739)	UQCRQ (ENSOKIG00005009683)	ENSOKIG00005009690	septin8b (ENSOKIG00005009718)	ENSOKIG00005009966	ccng1 (ENSOKIG00005009983)	ENSOKIG00005010005	gabra6a (ENSOKIG00005010017)	gabrb2a (ENSOKIG00005010038)	ENSOKIG00005010250	atp7a (ENSOKIG00005010437)	sfxn1 (ENSOKIG00005012833)
Salmo	ANCESTRAL SPECIES	24	ENSGT00970000194185.B.a	ENSGT00970000194185.B.b	ENSGT00440000040163.f	ENSGT00940000157209.e	ENSGT00940000158229.h	ENSGT00530000063872.A.d	ENSGT00940000160481.g	ENSGT00390000006915.c.d.a.f.b	ENSGT00940000167495.c	ENSGT00940000159580.r.b	ENSGT00940000156123.a.a	ENSGT00940000178948.a	ENSGT00940000156386.n	ENSGT00940000155875.s.a.b	ENSGT00940000156071.a.h #17	ENSGT00940000156385.a.f #22	ENSGT00940000165035.a	ENSGT00390000012721.a.g.b.c #26	ENSGT00390000014316.c.b.e.a #28	ENSGT00940000156067.g.b.e.b	ENSGT00390000004029.c.a.b	ENSGT00940000159784.k	ENSGT00950000183003.a.a.a.a.b.d.m	ENSGT00940000156068.j.f	ENSGT00940000154726.rb.a	ENSGT00940000172088	ENSGT00940000156722.b.d	ENSGT00940000154245.A.jb.b.c	ENSGT00940000159568.k.a	ENSGT01030000234641.b.a.b.a.b.q.b	ENSGT00550000074618.a.a.lb.a.d
Atlantic salmon	MODERN SPECIES	24	ENSSSAG00000063721	ENSSSAG00000104374	ENSSSAG00000014649	ENSSSAG00000091201	nlgn3a (ENSSSAG00000121237)	ENSSSAG00000066568	ENSSSAG00000119562	ENSSSAG00000115877	ENSSSAG00000103923	ENSSSAG00000098977	ENSSSAG00000116463	kif3a (ENSSSAG00000062434)	ENSSSAG00000062323	kctd16a (ENSSSAG00000062280) #17	ENSSSAG00000089870	nr3c1 (ENSSSAG00000062169) #22	ENSSSAG00000061598 #26	ENSSSAG00000042995	ENSSSAG00000109728	ENSSSAG00000095278	ENSSSAG00000042721	ENSSSAG00000044568	ccng1 (ENSSSAG00000109221)	ENSSSAG00000042485	gabra6a (ENSSSAG00000042446)	gabrb2a (ENSSSAG00000075781)	ENSSSAG00000041826	sfxn1 (ENSSSAG00000054175)	pp2aa (ENSSSAG00000042241)	si:ch1073-44g3.1 (ENSSSAG00000042224)	ENSSSAG00000119037
River trout	MODERN SPECIES	22	nsdhl (ENSSTUG00000013312)	ENSSTUG00000013261	RAB9B (ENSSTUG00000013251)	plp1a (ENSSTUG00000013214)	pcdh20 (ENSSTUG00000013208)	ENSSTUG00000013192	ENSSTUG00000013174	ENSSTUG00000013169	ENSSTUG00000012893	ENSSTUG00000012860	ENSSTUG00000012827	kif3a (ENSSTUG00000012540)	ENSSTUG00000012485	kctd16a (ENSSTUG00000012472) #17	ENSSTUG00000012457	nr3c1 (ENSSTUG00000012316) #22	fgf1a (ENSSTUG00000012303)	NDFIP1 (ENSSTUG00000012258) #26	gnpda1 (ENSSTUG00000012209) #28	hspa4b (ENSSTUG00000004613)	uqcrq (ENSSTUG00000004319)	gdf9 (ENSSTUG00000004307)	ENSSTUG00000004294	septin8b (ENSSTUG00000003576)	ccng1 (ENSSTUG00000003509)	ENSSTUG00000003459	gabra6a (ENSSTUG00000003335)	gabrb2a (ENSSTUG00000003134)	sfxn1 (ENSSTUG00000003096)	ppp2caa (ENSSTUG00000003079)	si:ch1073-44g3.1 (ENSSTUG00000003074)
Northern pike	MODERN SPECIES	3	nsdhl (ENSELUG00000004417)	ENSELUG00000004403	fut11 (ENSELUG00000004392)	RAB9B (ENSELUG00000004378)	plp1a (ENSELUG00000024584)	pcdh20 (ENSELUG00000024539)	nlgn3a (ENSELUG00000024503)	ENSELUG00000024375	ENSELUG00000024245	ENSELUG00000024214	ENSELUG00000024148	ENSELUG00000034359	ENSELUG00000024034	kif3a (ENSELUG00000024021)	ENSELUG00000023931 #13	ENSELUG00000023896 #22	kctd16a (ENSELUG00000023920) #17	fgf1a (ENSELUG00000023891)	NDFIP1 (ENSELUG00000023844) #26	gnpda1 (ENSELUG00000023817) #28	hspa4b (ENSELUG00000023803)	gdf9 (ENSELUG00000023686)	ENSELUG00000023342	septin8b (ENSELUG00000023338)	ccng1 (ENSELUG00000030151)	nudcd2 (ENSELUG00000023272)	gabra6a (ENSELUG00000023227)	gabrb2a (ENSELUG00000023213)	ENSELUG00000023174	atp7a (ENSELUG00000023084)	sfxn1 (ENSELUG00000022974)
Osteoglossocephalai	ANCESTRAL SPECIES	195				ENSGT00390000018781	ENSGT00940000156386	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000160067 #13	ENSGT00950000182810.A.b #15	ENSGT00940000156071.a #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254 #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00530000063825.A.d	ENSGT00390000014316.c.b #28	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00390000004029	ENSGT00940000159784	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b	ENSGT00940000156068.i
Osteoglossiformes	ANCESTRAL SPECIES	23	ENSGT00390000007125.b.g	ENSGT00390000014412.k	ENSGT00390000005989.a.a.b	ENSGT00390000005989.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a.s	ENSGT00390000000483.a.a.e	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000156386.c	ENSGT00940000160880.d #9	ENSGT00510000046929.b.g #10	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000156385.b #22	ENSGT00940000157254.p #23	ENSGT00950000183055.b.b.a #25	ENSGT00940000154507.s #29	ENSGT00940000156067.h	ENSGT00730000111200	ENSGT00950000182974.a.a.b.i	ENSGT00940000160656.c	ENSGT00950000183003.a.a.a.a.b.f	ENSGT00940000156068.i	ENSGT00940000162679.d	ENSGT00940000156685.y.b
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	1446																ENSPKIG00000024696 #22
P. kingsleyae	MODERN SPECIES	1449																ENSPKIG00000005437 #22
P. kingsleyae	MODERN SPECIES	329								drd1b (ENSPKIG00000024692)	RAD50 (ENSPKIG00000024646)	kif3a (ENSPKIG00000024590)	POU4F3 (ENSPKIG00000024572) #9	RBM27 (ENSPKIG00000024548) #10	PLAC8L1 (ENSPKIG00000024535) #12	GRXCR2 (ENSPKIG00000024526) #14	kctd16b (ENSPKIG00000024508) #17	NR3C1 (ENSPKIG00000024489) #22	ARHGAP26 (ENSPKIG00000024432) #23	spry4 (ENSPKIG00000024363) #25	NDFIP1 (ENSPKIG00000024354) #26	rnf14 (ENSPKIG00000024337) #29	HSPA4 (ENSPKIG00000024298)	zcchc10 (ENSPKIG00000024279)	AFF4 (ENSPKIG00000024249)	ENSPKIG00000024154	SOWAHA (ENSPKIG00000024141)	septin8a (ENSPKIG00000024108)	CCNI2 (ENSPKIG00000024127)
Asian bonytongue	MODERN SPECIES	19	ENSSFOG00015000086	PCYOX1L (ENSSFOG00015024935)	atp6v0e1 (ENSSFOG00015026286)	CREBRF (ENSSFOG00015000199)	stc2a (ENSSFOG00015000247)	bod1 (ENSSFOG00015000254)	CPEB4 (ENSSFOG00015000264)	nsg2 (ENSSFOG00015000318)	drd1b (ENSSFOG00015000350)	RAD50 (ENSSFOG00015000414)	kif3a (ENSSFOG00015000552)	POU4F3 (ENSSFOG00015000571) #9	ENSSFOG00015000620 #12	GRXCR2 (ENSSFOG00015029720) #14	kctd16b (ENSSFOG00015000640) #17	NR3C1 (ENSSFOG00015000680) #22	ARHGAP26 (ENSSFOG00015000688) #23	spry4 (ENSSFOG00015029236) #25	ndfip1l (ENSSFOG00015031123) #26	rnf14 (ENSSFOG00015000731) #29	hspa4b (ENSSFOG00015000742)	zcchc10 (ENSSFOG00015000832)	AFF4 (ENSSFOG00015000839)	ENSSFOG00015000893	SOWAHA (ENSSFOG00015031119)	septin8a (ENSSFOG00015000919)	CCNI2 (ENSSFOG00015000927)	GABRG2 (ENSSFOG00015002914)	gabra1 (ENSSFOG00015000992)	GABRA6 (ENSSFOG00015001032)	gabrb2a (ENSSFOG00015001078)
Clupeocephala	ANCESTRAL SPECIES	11	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254 #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Otomorpha	ANCESTRAL SPECIES	16	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254 #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Otophysi	ANCESTRAL SPECIES	137	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254 #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00390000001134.b.`b.b	ENSGT00940000158972
Characiphysae	ANCESTRAL SPECIES	60	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781.x	ENSGT00390000018781.w.a	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254 #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00390000001134.b.`b.b	ENSGT00940000158972
Characiphysae_b	ANCESTRAL SPECIES	6	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781.x	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254 #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00390000001134.b.`b.b	ENSGT00940000158972
Characoidei	ANCESTRAL SPECIES	17	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781.x	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254 #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a.a	ENSGT00940000168656	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00390000001134.b.`b.b	ENSGT00940000158972
Red-bellied piranha	MODERN SPECIES	73							drd1b (ENSPNAG00000027444)	RAD50 (ENSPNAG00000027413)	pou4f3 (ENSPNAG00000027241) #9	RBM27 (ENSPNAG00000027218) #10	LARS1 (ENSPNAG00000027191) #11	PLAC8L1 (ENSPNAG00000027048) #12	GRXCR2 (ENSPNAG00000005035) #14	kctd16b (ENSPNAG00000026987) #17	yipf5 (ENSPNAG00000026975) #18	NR3C1 (ENSPNAG00000005159) #22	ARHGAP26 (ENSPNAG00000006266) #23	fgf1b (ENSPNAG00000026613)	spry4 (ENSPNAG00000026599) #25	ndfip1l (ENSPNAG00000026565) #26	endou2 (ENSPNAG00000026537)	rnf14 (ENSPNAG00000004066) #29	hspa4a (ENSPNAG00000004058)	ENSPNAG00000026350	AFF4 (ENSPNAG00000004777)	ENSPNAG00000026258	SOWAHA (ENSPNAG00000005600)	septin8a (ENSPNAG00000005865)	CCNI2 (ENSPNAG00000006260)	frmd7 (ENSPNAG00000026085)	stk26 (ENSPNAG00000005204)
Mexicana tetra	MODERN SPECIES	5	ENSAMXG00000041169	ENSAMXG00000029161	msx2b (ENSAMXG00000041559)	ENSAMXG00000043317	drd1b (ENSAMXG00000024960)	RAD50 (ENSAMXG00000019920)	pou4f3 (ENSAMXG00000019937) #9	RBM27 (ENSAMXG00000029605) #10	LARS1 (ENSAMXG00000019979) #11	PLAC8L1 (ENSAMXG00000037919) #12	GRXCR2 (ENSAMXG00000041407) #14	kctd16b (ENSAMXG00000020022) #17	ENSAMXG00000043236	ENSAMXG00000035749	yipf5 (ENSAMXG00000030495) #18	NR3C1 (ENSAMXG00000039789) #22	ARHGAP26 (ENSAMXG00000020057) #23	ENSAMXG00000024964	ENSAMXG00000020243	ENSAMXG00000040151	ENSAMXG00000025188	ENSAMXG00000043707	HTR2C (ENSAMXG00000030762)	ENSAMXG00000033719	rnf121 (ENSAMXG00000042257)	ENSAMXG00000038625	kif4 (ENSAMXG00000020300)	ammecr1 (ENSAMXG00000020324)	ENSAMXG00000034707	TMEM164 (ENSAMXG00000035817)	fundc2 (ENSAMXG00000043151)
Electric eel	MODERN SPECIES	443							RAD50 (ENSEEEG00000006900)	pou4f3 (ENSEEEG00000006888) #9	RBM27 (ENSEEEG00000006885) #10	LARS1 (ENSEEEG00000005877) #11	PLAC8L1 (ENSEEEG00000005844) #12	GRXCR2 (ENSEEEG00000005843) #14	ENSEEEG00000005842	kctd16b (ENSEEEG00000005840) #17	yipf5 (ENSEEEG00000005838) #18	NR3C1 (ENSEEEG00000005733) #22	ARHGAP26 (ENSEEEG00000005709) #23	fgf1b (ENSEEEG00000005696)	spry4 (ENSEEEG00000005695) #25
Channel catfish	MODERN SPECIES	9	ENSIPUG00000010479	GABRA3 (ENSIPUG00000010510)	ENSIPUG00000010521	brcc3 (ENSIPUG00000010538)	FUNDC1 (ENSIPUG00000010565)	cmc4 (ENSIPUG00000010593)	TMEM164 (ENSIPUG00000010615)	ammecr1 (ENSIPUG00000010641)	kif4 (ENSIPUG00000010666)	RNF121 (ENSIPUG00000010700)	lars (ENSIPUG00000010756) #11	ENSIPUG00000010884	grxcr2 (ENSIPUG00000010891) #14	kctd16 (ENSIPUG00000010898) #17	yipf5 (ENSIPUG00000010902) #18	nr3c1 (ENSIPUG00000010944) #22	ARHGAP26 (ENSIPUG00000010994) #23	Fgf1 (ENSIPUG00000011328)	spry4 (ENSIPUG00000011350) #25	NFI1L (ENSIPUG00000011367) #26	endou2 (ENSIPUG00000011459)	rnf14 (ENSIPUG00000011466) #29	HSPA4 (ENSIPUG00000011525)	Zcchc10 (ENSIPUG00000011660)	aff4 (ENSIPUG00000011689)	ENSIPUG00000011720	ENSIPUG00000011754	septin8a (ENSIPUG00000011782)	stk26 (ENSIPUG00000011923)	tmem185a (ENSIPUG00000011988)	HTR2C (ENSIPUG00000012032)
Cyprinoidei	ANCESTRAL SPECIES	95	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781.z.a	ENSGT00990000209912	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163.e #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254 #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	328		ENSGT00940000156198.c.b.b.a	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a.b	ENSGT00940000164716.B.c	ENSGT00940000155857.f.b.e	ENSGT00390000018781.z.a.b	ENSGT00990000209912.b	ENSGT00940000160880.f #9	ENSGT00510000046929.b.e #10	ENSGT00390000012163.e.b #11	ENSGT00940000160864.c #12	ENSGT00940000158849.a.b #14	ENSGT00940000156071.b.c #17	ENSGT00940000153168.C.a.a.b #18	ENSGT00940000156385.b.c #22	ENSGT00940000157254.s #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b.c #25	ENSGT00390000012721.a.j.a.b #26	ENSGT00940000158744.b	ENSGT01060000248589.C.h	ENSGT00940000164188.h	ENSGT00940000159444.e	ENSGT00390000000360.a	ENSGT00960000187909	ENSGT00940000164188.g.a	ENSGT00940000159444.f	ENSGT00390000000360.b	ENSGT00940000154783	ENSGT00390000007430
Goldfish	MODERN SPECIES	13	ENSCARG00000022652	ENSCARG00000022639	il13 (ENSCARG00000022621)	il13 (ENSCARG00000022610)	pou4f3 (ENSCARG00000022604) #9	RBM27 (ENSCARG00000021894) #10	LARS1 (ENSCARG00000019794) #11	PLAC8L1 (ENSCARG00000019720) #12	GRXCR2 (ENSCARG00000019715) #14	kctd16b (ENSCARG00000019712) #17	yipf5 (ENSCARG00000019696) #18	or70a16 (ENSCARG00000019686)	ENSCARG00000019679	or70a13 (ENSCARG00000019671)	or70a4 (ENSCARG00000019662)	NR3C1 (ENSCARG00000019579) #22	ARHGAP26 (ENSCARG00000014716) #23	fgf1b (ENSCARG00000014561)	spry4 (ENSCARG00000014557) #25	mpp1 (ENSCARG00000014055)	ENSCARG00000013972	GABRA3 (ENSCARG00000013735)	BRCC3 (ENSCARG00000013688)	fundc2 (ENSCARG00000013680)	TMEM164 (ENSCARG00000013669)	ammecr1 (ENSCARG00000013659)	ndufa2 (ENSCARG00000013647)	cdx1b (ENSCARG00000013644)	camk2a (ENSCARG00000013583)	sra1 (ENSCARG00000013570)	ENSCARG00000013565
Cyprininae_a	ANCESTRAL SPECIES	62	ENSGT00390000005989.a.b.a.b.h	ENSGT00940000156198.c.b.b.b.a	ENSGT00940000154998.a.a.v	ENSGT00390000000483.a.a.b	ENSGT00940000164716.B.c	ENSGT00940000155857.f.b.e	ENSGT00390000018781.z.a.b	ENSGT00990000209912.b	ENSGT00940000160880.f #9	ENSGT00510000046929.b.e #10	ENSGT00390000012163.e.b #11	ENSGT00940000160864.c #12	ENSGT00940000158849.a.b #14	ENSGT00940000156071.b.c #17	ENSGT00940000153168.C.a.a.b #18	ENSGT00940000156385.b.c #22	ENSGT00940000157254.s #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b.c #25	ENSGT00390000012721.a.j.a.b #26	ENSGT00940000158744.b	ENSGT01060000248589.C.h.b	ENSGT00940000164188.h	ENSGT00940000159444.e	ENSGT00390000000360.a	ENSGT00960000187909	ENSGT00940000154783	ENSGT00390000007430.g	ENSGT00390000010397.a.d	ENSGT00940000155150.b.b.e	ENSGT00390000001803
Common carp reference	MODERN SPECIES	45	msx2b (ENSCCRG00000060099)	ENSCCRG00000062661	drd1b (ENSCCRG00000057876)	ENSCCRG00000022182	il13 (ENSCCRG00000060350)	ENSCCRG00000077990	ENSCCRG00000016289	pou4f3 (ENSCCRG00000059824) #9	ENSCCRG00000059391	RBM27 (ENSCCRG00000040207) #10	LARS1 (ENSCCRG00000040555) #11	PLAC8L1 (ENSCCRG00000068397) #12	GRXCR2 (ENSCCRG00000037642) #14	kctd16b (ENSCCRG00000078994) #17	yipf5 (ENSCCRG00000057489) #18	NR3C1 (ENSCCRG00000069824) #22	ARHGAP26 (ENSCCRG00000000569) #23	ENSCCRG00000072800	SPRY4 (ENSCCRG00000061294) #25	ndfip1l (ENSCCRG00000079677) #26	ENSCCRG00000075064	ENSCCRG00000040913	ENSCCRG00000054131	ENSCCRG00000068762	ENSCCRG00000028618	cmc4 (ENSCCRG00000055083)	fundc2 (ENSCCRG00000081450)	ENSCCRG00000061573	ammecr1 (ENSCCRG00000065714)	ENSCCRG00000051647	cdx1b (ENSCCRG00000009850)
Golden-line barbel	MODERN SPECIES	38	STC2 (ENSSGRG00000043790)	bod1 (ENSSGRG00000043789)	cpeb4b (ENSSGRG00000043538)	nsg2 (ENSSGRG00000043535)	msx2b (ENSSGRG00000043534)	drd1b (ENSSGRG00000043533)	RAD50 (ENSSGRG00000043514)	il13 (ENSSGRG00000043508)	il13 (ENSSGRG00000043500)	pou4f3 (ENSSGRG00000043499) #9	RBM27 (ENSSGRG00000043498) #10	LARS1 (ENSSGRG00000042493) #11	PLAC8L1 (ENSSGRG00000042475) #12	kctd16b (ENSSGRG00000042474) #17	yipf5 (ENSSGRG00000042473) #18	NR3C1 (ENSSGRG00000042443) #22	ARHGAP26 (ENSSGRG00000042109) #23	fgf1b (ENSSGRG00000042105)	spry4 (ENSSGRG00000042104) #25	ndfip1l (ENSSGRG00000041937) #26	mpp1 (ENSSGRG00000041859)	ENSSGRG00000041855	ENSSGRG00000041802	GABRA3 (ENSSGRG00000041764)	BRCC3 (ENSSGRG00000041751)	ENSSGRG00000041750	fundc2 (ENSSGRG00000041748)	TMEM164 (ENSSGRG00000041744)	ammecr1 (ENSSGRG00000041743)	ndufa2 (ENSSGRG00000041739)	cdx1b (ENSSGRG00000041738)
Cyprininae	ANCESTRAL SPECIES	309	ENSGT00390000005989.a.b.a.b.g	ENSGT00940000156198.c.b.b.b.b	ENSGT00940000160357.f	ENSGT00390000000483.a.a.a	ENSGT00940000164716.B.d	ENSGT00940000155857.f.b.f	ENSGT00390000018781.z.a.a	ENSGT00990000209912.a	ENSGT00940000160880.e #9	ENSGT00510000046929.b.f #10	ENSGT00390000012163.e.a #11	ENSGT00940000160864.d #12	ENSGT00940000158849.a.a #14	ENSGT00940000156071.b.d #17	ENSGT00940000153168.C.a.a.a #18	ENSGT00940000156385.b.d #22	ENSGT00940000157254.t #23	ENSGT01060000253365	ENSGT00950000183055.b.b.d #25	ENSGT00390000012721.a.j.a.a #26	ENSGT00940000158744.a
Cyprininae_a	ANCESTRAL SPECIES	83	ENSGT00390000005989.a.b.a.b.g	ENSGT00940000156198.c.b.b.b.b	ENSGT00940000154998.a.a.u	ENSGT00390000000483.a.a.a	ENSGT00940000164716.B.d	ENSGT00940000155857.f.b.f	ENSGT00390000018781.z.a.a	ENSGT00990000209912.a	ENSGT00940000160880.e #9	ENSGT00510000046929.b.f #10	ENSGT00390000012163.e.a #11	ENSGT00940000160864.d #12	ENSGT00940000158849.a.a #14	ENSGT00940000156071.b.d #17	ENSGT00940000153168.C.a.a.a #18	ENSGT00940000156385.b.d #22	ENSGT00940000157254.t #23	ENSGT01060000253365	ENSGT00950000183055.b.b.d #25	ENSGT00390000012721.a.j.a.a #26	ENSGT00940000158744.a	ENSGT01060000248589.C.h.a	ENSGT00940000164188.g.b	ENSGT00940000159444.f	ENSGT00390000000360.b	ENSGT00390000007430.h	ENSGT00390000010397.a.c.b	ENSGT00940000165351.i.b	ENSGT00390000006178	ENSGT00940000166125	ENSGT00940000164078.a.b.a.a
Golden-line barbel	MODERN SPECIES	90	bod1 (ENSSGRG00000054377)	CPEB4 (ENSSGRG00000054379)	nsg2 (ENSSGRG00000054408)	msx2b (ENSSGRG00000054409)	drd1b (ENSSGRG00000054410)	RAD50 (ENSSGRG00000054417)	ENSSGRG00000054462	il13 (ENSSGRG00000054463)	pou4f3 (ENSSGRG00000054464) #9	RBM27 (ENSSGRG00000054466) #10	LARS1 (ENSSGRG00000054471) #11	PLAC8L1 (ENSSGRG00000054475) #12	GRXCR2 (ENSSGRG00000054476) #14	kctd16b (ENSSGRG00000000084) #17	yipf5 (ENSSGRG00000000087) #18	NR3C1 (ENSSGRG00000000143) #22	ARHGAP26 (ENSSGRG00000000427) #23	fgf1b (ENSSGRG00000000429)	spry4 (ENSSGRG00000000430) #25	ndfip1l (ENSSGRG00000000438) #26	mpp1 (ENSSGRG00000000477)	ENSSGRG00000000478
Common carp reference	MODERN SPECIES	38	bod1 (ENSCCRG00000058933)	CPEB4 (ENSCCRG00000027289)	nsg2 (ENSCCRG00000055410)	ENSCCRG00000074707	msx2b (ENSCCRG00000061968)	ENSCCRG00000024470	drd1b (ENSCCRG00000075305)	ENSCCRG00000046555	pou4f3 (ENSCCRG00000033292) #9	RBM27 (ENSCCRG00000040551) #10	LARS1 (ENSCCRG00000040615) #11	PLAC8L1 (ENSCCRG00000062421) #12	GRXCR2 (ENSCCRG00000030652) #14	kctd16b (ENSCCRG00000078364) #17	yipf5 (ENSCCRG00000030517) #18	NR3C1 (ENSCCRG00000030575) #22	ARHGAP26 (ENSCCRG00000035429) #23	ENSCCRG00000049610	SPRY4 (ENSCCRG00000073298) #25	ndfip1l (ENSCCRG00000049510) #26	mpp1 (ENSCCRG00000060493)	ENSCCRG00000038473	ENSCCRG00000059642	ENSCCRG00000024195	ENSCCRG00000011248	ENSCCRG00000078631	ENSCCRG00000056521	ENSCCRG00000011266	fundc2 (ENSCCRG00000011328)	ENSCCRG00000028623	ammecr1 (ENSCCRG00000028611)
Goldfish	MODERN SPECIES	40	bod1 (ENSCARG00000036253)	cpeb4b (ENSCARG00000036035)	msx2b (ENSCARG00000035982)	ENSCARG00000035971	drd1b (ENSCARG00000035964)	RAD50 (ENSCARG00000035313)	il13 (ENSCARG00000035284)	pou4f3 (ENSCARG00000035276) #9	RBM27 (ENSCARG00000035200) #10	LARS1 (ENSCARG00000034948) #11	PLAC8L1 (ENSCARG00000034885) #12	GRXCR2 (ENSCARG00000034875) #14	kctd16b (ENSCARG00000034867) #17	yipf5 (ENSCARG00000034849) #18	ENSCARG00000034841	NR3C1 (ENSCARG00000034140) #22	ENSCARG00000034056	ARHGAP26 (ENSCARG00000024421) #23	ENSCARG00000024180	spry4 (ENSCARG00000024176) #25	ndfip1l (ENSCARG00000024145) #26	ENSCARG00000024134	ENSCARG00000024125	GABRA3 (ENSCARG00000024107)	cmc4 (ENSCARG00000024099)	ENSCARG00000024059	TMEM164 (ENSCARG00000024037)	ammecr1 (ENSCARG00000024019)	ENSCARG00000024011	ndufa2 (ENSCARG00000024001)	ENSCARG00000023993
Clupeiformes	ANCESTRAL SPECIES	137	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00940000154049.a	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254 #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00940000153253.b.a	ENSGT00940000155974	ENSGT00390000013836	ENSGT00390000002172.A.a.e	ENSGT00940000161716.kc.b	ENSGT00940000155578.f	ENSGT00940000159751.x.b	ENSGT00940000161542
Atlantic herring	MODERN SPECIES	24	nsg2 (ENSCHAG00000002874)	msx2b (ENSCHAG00000002919)	ENSCHAG00000002932	drd1b (ENSCHAG00000002951)	RAD50 (ENSCHAG00000003034)	ENSCHAG00000004800	pou4f3 (ENSCHAG00000004811) #9	RBM27 (ENSCHAG00000004835) #10	nsrp1 (ENSCHAG00000004910)	LARS1 (ENSCHAG00000004966) #11	PLAC8L1 (ENSCHAG00000006032) #12	GRXCR2 (ENSCHAG00000006064) #14	ENSCHAG00000006081	kctd16b (ENSCHAG00000006089) #17	yipf5 (ENSCHAG00000006102) #18	NR3C1 (ENSCHAG00000006120) #22	ARHGAP26 (ENSCHAG00000006304) #23	ENSCHAG00000011768	spry4 (ENSCHAG00000011777) #25	ndfip1l (ENSCHAG00000011787) #26	endou2 (ENSCHAG00000011911)	rnf14 (ENSCHAG00000011948) #29	hspa4a (ENSCHAG00000011973)	ENSCHAG00000012924	nsun5 (ENSCHAG00000012931)	tbl2 (ENSCHAG00000013045)	bcl7ba (ENSCHAG00000013098)	ENSCHAG00000013108	ENSCHAG00000013128	ENSCHAG00000013236	ENSCHAG00000013256
Denticle herring	MODERN SPECIES	16	STC2 (ENSDCDG00000035041)	bod1 (ENSDCDG00000035040)	CPEB4 (ENSDCDG00000035030)	nsg2 (ENSDCDG00000035028)	msx2b (ENSDCDG00000035023)	drd1b (ENSDCDG00000035021)	RAD50 (ENSDCDG00000034984)	pou4f3 (ENSDCDG00000034965) #9	RBM27 (ENSDCDG00000034963) #10	nsrp1 (ENSDCDG00000034959)	LARS1 (ENSDCDG00000034864) #11	PLAC8L1 (ENSDCDG00000034860) #12	GRXCR2 (ENSDCDG00000034858) #14	kctd16b (ENSDCDG00000034856) #17	yipf5 (ENSDCDG00000034855) #18	NR3C1 (ENSDCDG00000034853) #22	ARHGAP26 (ENSDCDG00000034407) #23	fgf1b (ENSDCDG00000034334)	spry4 (ENSDCDG00000034332) #25	ndfip1l (ENSDCDG00000034317) #26	endou2 (ENSDCDG00000034309)	rnf14 (ENSDCDG00000034306) #29	ENSDCDG00000034305	hspa4a (ENSDCDG00000034139)	ENSDCDG00000034127	nsun5 (ENSDCDG00000034124)	tbl2 (ENSDCDG00000034123)	bcl7ba (ENSDCDG00000034122)	ENSDCDG00000034121	myl10 (ENSDCDG00000034119)	CUX1 (ENSDCDG00000034118)
Euteleosteomorpha	ANCESTRAL SPECIES	25	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Protacanthopterygii	ANCESTRAL SPECIES	44	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a.w	ENSGT00940000154998.a.a.x	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.q.a #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.h #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	39	ENSGT00390000007125.b.a	ENSGT00390000014412.k.a	ENSGT00390000005989.a.b.a.b.a	ENSGT00940000156198.c.b.d	ENSGT00940000154998.a.a.w	ENSGT00390000000483.a.a.d	ENSGT00940000164716.B.a	ENSGT00940000155857.f.b.c	ENSGT00940000160880.g #9	ENSGT00510000046929.b.c #10	ENSGT00390000012163.d #11	ENSGT00940000160864.b #12	ENSGT00940000158849 #14	ENSGT00940000156071.b.a #17	ENSGT00940000153168.C.a.a.c #18	ENSGT00940000156385.b.e #22	ENSGT00940000157254.q.a #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b.f #25	ENSGT00390000012721.a.h.a #26	ENSGT00530000063825.A.d.d	ENSGT00940000154507.s.f #29	ENSGT00940000156067.g.a.i	ENSGT00730000111200.hb	ENSGT00950000182974.a.a.b.n	ENSGT00940000160656.j	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i.b	ENSGT00940000162679.h	ENSGT00940000156685.x	ENSGT00940000159136.m
Huchen	MODERN SPECIES	1742														kctd16b (ENSHHUG00000043909) #17	yipf5 (ENSHHUG00000043912) #18	NR3C1 (ENSHHUG00000043925) #22	ENSHHUG00000043951 #23
Salmoninae_a	ANCESTRAL SPECIES	44	ENSGT00390000007125.b.a	ENSGT00390000014412.k.a	ENSGT00390000005989.a.b.a.b.a	ENSGT00940000156198.c.b.d	ENSGT00940000154998.a.a.w	ENSGT00390000000483.a.a.d	ENSGT00940000164716.B.a	ENSGT00940000155857.f.b.c	ENSGT00940000160880.g #9	ENSGT00510000046929.b.c #10	ENSGT00390000012163.d #11	ENSGT00940000160864.b #12	ENSGT00940000158849 #14	ENSGT00940000156071.b.a #17	ENSGT00940000153168.C.a.a.c #18	ENSGT00940000156385.b.e #22	ENSGT00940000157254.q.a #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b.f #25	ENSGT00390000012721.a.h.a #26	ENSGT00530000063825.A.d.d	ENSGT00940000154507.s.f #29	ENSGT00940000156067.g.a.i	ENSGT00730000111200.hb	ENSGT00950000182974.a.a.b.n	ENSGT00940000160656.j	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i.b	ENSGT00940000162679.h	ENSGT00940000156685.x	ENSGT00940000159136.m
Salmo	ANCESTRAL SPECIES	17	ENSGT00390000007125.b.a	ENSGT00390000014412.k.a	ENSGT00390000005989.a.b.a.b.a	ENSGT00940000156198.c.b.d	ENSGT00940000154998.a.a.w	ENSGT00390000000483.a.a.d	ENSGT00940000164716.B.a	ENSGT00940000155857.f.b.c	ENSGT00940000160880.g #9	ENSGT00510000046929.b.c #10	ENSGT00390000012163.d #11	ENSGT00940000160864.b #12	ENSGT00940000158849 #14	ENSGT00940000156071.b.a #17	ENSGT00940000153168.C.a.a.c #18	ENSGT00940000156385.b.e #22	ENSGT00940000157254.q.a #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b.f #25	ENSGT00390000012721.a.h.a #26	ENSGT00530000063825.A.d.d	ENSGT00940000154507.s.f #29	ENSGT00940000156067.g.a.i	ENSGT00940000168656	ENSGT00950000182974.a.a.b.n	ENSGT00940000160656.j	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i.b	ENSGT00940000162679.h	ENSGT00940000156685.x	ENSGT00940000159136.m
Atlantic salmon	MODERN SPECIES	23	STC2 (ENSSSAG00000079338)	FA44B (ENSSSAG00000079334)	CPEB4 (ENSSSAG00000079086)	nsg2 (ENSSSAG00000117002)	msx2b (ENSSSAG00000117200)	DRD1 (ENSSSAG00000079063)	pou4f3 (ENSSSAG00000079060) #9	RBM27 (ENSSSAG00000079044) #10	ENSSSAG00000079034	ENSSSAG00000114419	PLAC8L1 (ENSSSAG00000079022) #12	GRXCR2 (ENSSSAG00000102850) #14	KCTD16 (ENSSSAG00000079018) #17	yipf5 (ENSSSAG00000097439) #18	ENSSSAG00000112728	NR3C1 (ENSSSAG00000078999) #22	ARHGAP26 (ENSSSAG00000078318) #23	FGF1 (ENSSSAG00000078271)	ENSSSAG00000110087	SPRY4 (ENSSSAG00000104116) #25	NDFIP1 (ENSSSAG00000078235) #26	ENSSSAG00000078231	RNF14 (ENSSSAG00000078228) #29	ENSSSAG00000078223	ENSSSAG00000078016	ENSSSAG00000103528	ZCH10 (ENSSSAG00000077977)	ENSSSAG00000077858	ENSSSAG00000077845	SOWAHA (ENSSSAG00000077842)	sept8 (ENSSSAG00000076438)
River trout	MODERN SPECIES	10	BNIP1 (ENSSTUG00000004871)	STC2 (ENSSTUG00000004904)	bod1 (ENSSTUG00000004914)	CPEB4 (ENSSTUG00000004949)	nsg2 (ENSSTUG00000005361)	msx2b (ENSSTUG00000005380)	ENSSTUG00000005387	drd1b (ENSSTUG00000005395)	pou4f3 (ENSSTUG00000005405) #9	RBM27 (ENSSTUG00000005420) #10	ENSSTUG00000005471 #11	ENSSTUG00000005499 #12	kctd16b (ENSSTUG00000005544) #17	yipf5 (ENSSTUG00000005552) #18	ENSSTUG00000005566	NR3C1 (ENSSTUG00000005575) #22	ARHGAP26 (ENSSTUG00000005785) #23	fgf1b (ENSSTUG00000006162)	spry4 (ENSSTUG00000006170) #25	ENSSTUG00000006175	NDFIP1 (ENSSTUG00000006185) #26	endou2 (ENSSTUG00000006268)	RNF14 (ENSSTUG00000006292) #29	HSPA4 (ENSSTUG00000006365)	ENSSTUG00000007707	AFF4 (ENSSTUG00000007739)	ENSSTUG00000007766	ENSSTUG00000007778	septin8a (ENSSTUG00000007841)	GABRG2 (ENSSTUG00000009879)	gabra1 (ENSSTUG00000010742)
Oncorhynchus	ANCESTRAL SPECIES	41	ENSGT00390000007125.b.a	ENSGT00390000014412.k.a	ENSGT00390000005989.a.b.a.b.a	ENSGT00940000156198.c.b.d	ENSGT00940000154998.a.a.w	ENSGT00390000000483.a.a.d	ENSGT00940000164716.B.a	ENSGT00940000155857.f.b.c	ENSGT00940000160880.g #9	ENSGT00510000046929.b.c #10	ENSGT00390000012163.d #11	ENSGT00940000160864.b #12	ENSGT00940000158849 #14	ENSGT00940000156071.b.a #17	ENSGT00940000153168.C.a.a.c #18	ENSGT00940000156385.b.e #22	ENSGT00940000157254.q.a #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b.f #25	ENSGT00390000012721.a.h.a #26	ENSGT00530000063825.A.d.d	ENSGT00940000154507.s.f #29	ENSGT00940000156067.g.a.i	ENSGT00730000111200.hb	ENSGT00950000182974.a.a.b.n	ENSGT00940000160656.j	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i.b	ENSGT00940000162679.h	ENSGT00940000156685.x	ENSGT00940000159136.m
Rainbow trout	MODERN SPECIES	1	bod1 (ENSOMYG00000031304)	CPEB4 (ENSOMYG00000031322)	nsg2 (ENSOMYG00000031369)	msx2b (ENSOMYG00000066549)	ENSOMYG00000052445	ENSOMYG00000070641	drd1b (ENSOMYG00000031391)	POU4F3 (ENSOMYG00000031397) #9	RBM27 (ENSOMYG00000031407) #10	ENSOMYG00000031427 #11	ENSOMYG00000072343	PLAC8L1 (ENSOMYG00000031448) #12	GRXCR2 (ENSOMYG00000031465) #14	kctd16b (ENSOMYG00000031471) #17	yipf5 (ENSOMYG00000031487) #18	NR3C1 (ENSOMYG00000031572) #22	ARHGAP26 (ENSOMYG00000031827) #23	ENSOMYG00000031854	ENSOMYG00000060773	ENSOMYG00000061901	SPRY4 (ENSOMYG00000031862) #25	nfip1 (ENSOMYG00000031901) #26	ENSOMYG00000067761	RNF14 (ENSOMYG00000031947) #29	hspa4a (ENSOMYG00000032117)	zcchc10 (ENSOMYG00000032505)	AFF4 (ENSOMYG00000032517)	ENSOMYG00000032527	ENSOMYG00000032528	SOWAHA (ENSOMYG00000032535)	septin8a (ENSOMYG00000032597)
Oncorhynchus_a	ANCESTRAL SPECIES	43	ENSGT00390000007125.b.a	ENSGT00390000014412.k.a	ENSGT00390000005989.a.b.a.b.a	ENSGT00940000156198.c.b.d	ENSGT00940000154998.a.a.w	ENSGT00390000000483.a.a.d	ENSGT00940000164716.B.a	ENSGT00940000155857.f.b.c	ENSGT00940000160880.g #9	ENSGT00510000046929.b.c #10	ENSGT01000000221046	ENSGT00940000160864.b #12	ENSGT00940000158849 #14	ENSGT00940000156071.b.a #17	ENSGT00940000153168.C.a.a.c #18	ENSGT00940000156385.b.e #22	ENSGT00940000157254.q.a #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b.f #25	ENSGT00390000012721.a.h.a #26	ENSGT00530000063825.A.d.d	ENSGT00940000154507.s.f #29	ENSGT00940000156067.g.a.i	ENSGT00730000111200.hb	ENSGT00950000182974.a.a.b.n	ENSGT00940000160656.j	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i.b	ENSGT00940000162679.h	ENSGT00940000156685.x	ENSGT00940000159136.m
Coho salmon	MODERN SPECIES	20	BNIP1 (ENSOKIG00005036339)	STC2 (ENSOKIG00005036318)	bod1 (ENSOKIG00005036294)	CPEB4 (ENSOKIG00005035997)	nsg2 (ENSOKIG00005035972)	msx2b (ENSOKIG00005035967)	drd1b (ENSOKIG00005035960)	POU4F3 (ENSOKIG00005035942) #9	RBM27 (ENSOKIG00005035894) #10	ENSOKIG00005035864	ENSOKIG00005035843 #12	GRXCR2 (ENSOKIG00005035833) #14	ENSOKIG00005035824	kctd16b (ENSOKIG00005035812) #17	yipf5 (ENSOKIG00005035792) #18	NR3C1 (ENSOKIG00005035497) #22	ARHGAP26 (ENSOKIG00005034922) #23	fgf1b (ENSOKIG00005034848)	ENSOKIG00005034841	SPRY4 (ENSOKIG00005034819) #25	NDFIP1 (ENSOKIG00005034762) #26	ENSOKIG00005034740	RNF14 (ENSOKIG00005034727) #29	hspa4a (ENSOKIG00005033802)	zcchc10 (ENSOKIG00005033746)	AFF4 (ENSOKIG00005033733)	ENSOKIG00005033714	SOWAHA (ENSOKIG00005033706)	septin8a (ENSOKIG00005031588)	ENSOKIG00005031483	GABRG2 (ENSOKIG00005030767)
Chinook salmon	MODERN SPECIES	23	TCERG1 (ENSOTSG00005002993) #8	ENSOTSG00005003266	CREBRF (ENSOTSG00005003593)	BNIP1 (ENSOTSG00005003594)	STC2 (ENSOTSG00005003596)	bod1 (ENSOTSG00005003597)	msx2b (ENSOTSG00005003600)	drd1b (ENSOTSG00005003602)	pou4f3 (ENSOTSG00005003603) #9	RBM27 (ENSOTSG00005003606) #10	ENSOTSG00005003611	ENSOTSG00005003614 #12	GRXCR2 (ENSOTSG00005003615) #14	kctd16b (ENSOTSG00005003616) #17	yipf5 (ENSOTSG00005003618) #18	NR3C1 (ENSOTSG00005003629) #22	ARHGAP26 (ENSOTSG00005003868) #23	fgf1b (ENSOTSG00005003871)	spry4 (ENSOTSG00005003872) #25	ENSOTSG00005003874	RNF145 (ENSOTSG00005003879)	UBLCP1 (ENSOTSG00005004012)	ENSOTSG00005004014	ubtd2 (ENSOTSG00005004017)	adrb2b (ENSOTSG00005004018)	NDFIP1 (ENSOTSG00005004020) #26	endou2 (ENSOTSG00005004263)	ENSOTSG00005004266 #29	hspa4a (ENSOTSG00005004283)	zcchc10 (ENSOTSG00005005069)	AFF4 (ENSOTSG00005005070)
Salmoninae	ANCESTRAL SPECIES	210	ENSGT00390000014412.k.b	ENSGT00390000005989.a.b.a.b.b	ENSGT00940000156198.c.b.c	ENSGT00940000154998.a.a.x	ENSGT00390000000483.a.a.c	ENSGT00940000164716.B.b	ENSGT00940000155857.f.b.d	ENSGT00390000018781	ENSGT00970000197177	ENSGT00940000160880.h #9	ENSGT00510000046929.b.d #10	ENSGT00390000012163.c #11	ENSGT00940000160864.a #12	ENSGT00940000156071.b.b #17	ENSGT00940000153168.C.a.a.d #18	ENSGT00940000156385.b.f #22	ENSGT00940000157254.q.b.a.a #23	ENSGT00950000183055.b.b.e #25	ENSGT00390000012721.a.h.b #26	ENSGT00530000063825.A.d.c	ENSGT00940000154507.s.e #29	ENSGT00940000156067.g.a.j	ENSGT00730000111200.ib	ENSGT00950000182974.a.a.b.m	ENSGT00940000160656.i	ENSGT00940000156068.i.a	ENSGT00940000162679.g	ENSGT00940000156685.w	ENSGT00940000159136.n	ENSGT00940000156722.a.c	ENSGT00940000154245.A.kb.c.a
Salmoninae_a	ANCESTRAL SPECIES	4	ENSGT00390000014412.k.b	ENSGT00390000005989.a.b.a.b.b	ENSGT00940000156198.c.b.c	ENSGT00940000154998.a.a.x	ENSGT00390000000483.a.a.c	ENSGT00940000164716.B.b	ENSGT00940000155857.f.b.d	ENSGT00390000018781	ENSGT00970000197177	ENSGT00940000160880.h #9	ENSGT00510000046929.b.d #10	ENSGT00390000012163.c #11	ENSGT00940000160864.a #12	ENSGT00940000156071.b.b #17	ENSGT00940000153168.C.a.a.d #18	ENSGT00940000156385.b.f #22	ENSGT00940000157254.q.b.a.a #23	ENSGT00950000183055.b.b.e #25	ENSGT00390000012721.a.h.b #26	ENSGT00530000063825.A.d.c	ENSGT00940000154507.s.e #29	ENSGT00940000156067.g.a.j	ENSGT00730000111200.ib	ENSGT00950000182974.a.a.b.m	ENSGT00940000160656.i	ENSGT00940000156068.i.a	ENSGT00940000162679.g	ENSGT00940000156685.w	ENSGT00940000159136.n	ENSGT00940000156722.a.c	ENSGT00940000154245.A.kb.c.a
Salmo	ANCESTRAL SPECIES	44	ENSGT00390000014412.k.b	ENSGT00390000005989.a.b.a.b.b	ENSGT00940000156198.c.b.c	ENSGT00940000154998.a.a.x	ENSGT00390000000483.a.a.c	ENSGT00940000164716.B.b	ENSGT00940000155857.f.b.d	ENSGT00390000018781	ENSGT00970000197177	ENSGT00940000160880.h #9	ENSGT00510000046929.b.d #10	ENSGT00390000012163.c #11	ENSGT00940000160864.a #12	ENSGT00940000156071.b.b #17	ENSGT00940000153168.C.a.a.d #18	ENSGT00940000156385.b.f #22	ENSGT00940000157254.q.b.b #23	ENSGT00950000183055.b.b.e #25	ENSGT00390000012721.a.h.b #26	ENSGT00530000063825.A.d.c	ENSGT00940000154507.s.e #29	ENSGT00940000156067.g.a.j	ENSGT00730000111200.ib	ENSGT00950000182974.a.a.b.m	ENSGT00940000160656.i	ENSGT00940000156068.i.a	ENSGT00940000162679.g	ENSGT00940000156685.w	ENSGT00940000159136.n	ENSGT00940000156722.a.c	ENSGT00940000154245.A.kb.c.a
River trout	MODERN SPECIES	6	BNIP1 (ENSSTUG00000012299)	STC2 (ENSSTUG00000012322)	bod1 (ENSSTUG00000012340)	CPEB4 (ENSSTUG00000012363)	nsg2 (ENSSTUG00000012611)	msx2b (ENSSTUG00000012621)	drd1b (ENSSTUG00000012628)	RAD50 (ENSSTUG00000012660)	ENSSTUG00000013572	pou4f3 (ENSSTUG00000013587) #9	RBM27 (ENSSTUG00000013599) #10	LARS1 (ENSSTUG00000013704) #11	PLAC8L1 (ENSSTUG00000016447) #12	kctd16b (ENSSTUG00000016456) #17	yipf5 (ENSSTUG00000016457) #18	NR3C1 (ENSSTUG00000016475) #22	ARHGAP26 (ENSSTUG00000016690) #23	ENSSTUG00000017188	spry4 (ENSSTUG00000017194) #25	ndfip1l (ENSSTUG00000017209) #26	endou2 (ENSSTUG00000017532)	RNF14 (ENSSTUG00000017541) #29	hspa4a (ENSSTUG00000017578)	zcchc10 (ENSSTUG00000018996)	AFF4 (ENSSTUG00000019017)	ENSSTUG00000019041	septin8a (ENSSTUG00000019060)	CCNI2 (ENSSTUG00000019315)	ENSSTUG00000019333	GABRG2 (ENSSTUG00000019385)	gabra1 (ENSSTUG00000020885)
Atlantic salmon	MODERN SPECIES	4	STC2 (ENSSSAG00000073897)	fa44b (ENSSSAG00000073900)	CPEB4 (ENSSSAG00000073910)	nsg2 (ENSSSAG00000108039)	msx2b (ENSSSAG00000074113)	ENSSSAG00000121958	drd1b (ENSSSAG00000074115)	ENSSSAG00000082153	ENSSSAG00000074157	pou4f3 (ENSSSAG00000075124) #9	RBM27 (ENSSSAG00000075133) #10	lars1b (ENSSSAG00000075198) #11	PLAC8L1 (ENSSSAG00000075842) #12	kctd16b (ENSSSAG00000086244) #17	YIPF5 (ENSSSAG00000075844) #18	NR3C1 (ENSSSAG00000075853) #22	ARHGAP26 (ENSSSAG00000076080) #23	SPRY4 (ENSSSAG00000111017) #25	NDFIP1 (ENSSSAG00000077522) #26	ENSSSAG00000077615	rnf14 (ENSSSAG00000077630) #29	hspa4a (ENSSSAG00000077661)	zcchc10 (ENSSSAG00000077928)	AFF4 (ENSSSAG00000077948)	ENSSSAG00000078010	septin8a (ENSSSAG00000078028)	CCNI (ENSSSAG00000078101)	GABRG2 (ENSSSAG00000039181)	gabra1 (ENSSSAG00000043760)	GABRA6 (ENSSSAG00000045177)	GABRB2 (ENSSSAG00000099903)
Oncorhynchus	ANCESTRAL SPECIES	4	ENSGT00390000014412.k.b	ENSGT00390000005989.a.b.a.b.b	ENSGT00940000156198.c.b.c	ENSGT00940000154998.a.a.x	ENSGT00390000000483.a.a.c	ENSGT00940000164716.B.b	ENSGT00940000155857.f.b.d	ENSGT00390000018781	ENSGT00970000197177	ENSGT00940000160880.h #9	ENSGT00510000046929.b.d #10	ENSGT00390000012163.c #11	ENSGT00940000160864.a #12	ENSGT00940000156071.b.b #17	ENSGT00940000153168.C.a.a.d #18	ENSGT00940000156385.b.f #22	ENSGT00940000157254.q.b.a.a #23	ENSGT00950000183055.b.b.e #25	ENSGT00390000012721.a.h.b #26	ENSGT00530000063825.A.d.c	ENSGT00940000154507.s.e #29	ENSGT00940000156067.g.a.j	ENSGT00730000111200.ib	ENSGT00950000182974.a.a.b.m	ENSGT00940000160656.i	ENSGT00940000156068.i.a	ENSGT00940000162679.g	ENSGT00940000156685.w	ENSGT00940000159136.n	ENSGT00940000156722.a.c	ENSGT00940000154245.A.kb.c.a
Rainbow trout	MODERN SPECIES	3	bod1 (ENSOMYG00000016088)	CPEB4 (ENSOMYG00000015957)	ENSOMYG00000009557	nsg2 (ENSOMYG00000015936)	msx2b (ENSOMYG00000056772)	drd1b (ENSOMYG00000015927)	ENSOMYG00000015782	pou4f3 (ENSOMYG00000015719) #9	RBM27 (ENSOMYG00000015678) #10	LARS1 (ENSOMYG00000015011) #11	PLAC8L1 (ENSOMYG00000014844) #12	ENSOMYG00000067417	kctd16b (ENSOMYG00000014832) #17	yipf5 (ENSOMYG00000014818) #18	ENSOMYG00000060259	NR3C1 (ENSOMYG00000014588) #22	ENSOMYG00000065121	ARHGAP26 (ENSOMYG00000010811) #23	SPRY4 (ENSOMYG00000010326) #25	ENSOMYG00000069020	NDFIP1 (ENSOMYG00000010267) #26	ENSOMYG00000010160	RNF14 (ENSOMYG00000010153) #29	hspa4a (ENSOMYG00000008837)	zcchc10 (ENSOMYG00000008055)	AFF4 (ENSOMYG00000008023)	ENSOMYG00000007978	ENSOMYG00000067676	septin8a (ENSOMYG00000007284)	CCNI2 (ENSOMYG00000006476)	GABRG2 (ENSOMYG00000006235)
Oncorhynchus_a	ANCESTRAL SPECIES	2	ENSGT00390000014412.k.b	ENSGT00390000005989.a.b.a.b.b	ENSGT00940000156198.c.b.c	ENSGT00940000154998.a.a.x	ENSGT00390000000483.a.a.c	ENSGT00940000164716.B.b	ENSGT00940000155857.f.b.d	ENSGT00390000018781	ENSGT00970000197177	ENSGT00940000160880.h #9	ENSGT00510000046929.b.d #10	ENSGT00390000012163.c #11	ENSGT00940000160864.a #12	ENSGT00940000156071.b.b #17	ENSGT00940000153168.C.a.a.d #18	ENSGT00940000156385.b.f #22	ENSGT00940000157254.q.b.a.a #23	ENSGT00950000183055.b.b.e #25	ENSGT00390000012721.a.h.b #26	ENSGT00530000063825.A.d.c	ENSGT00940000154507.s.e #29	ENSGT00940000156067.g.a.j	ENSGT00730000111200.ib	ENSGT00950000182974.a.a.b.m	ENSGT00940000160656.i	ENSGT00940000156068.i.a	ENSGT00940000162679.g	ENSGT00940000156685.w	ENSGT00940000159136.n	ENSGT00940000156722.a.c	ENSGT00940000154245.A.kb.c.a
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	33	PANX3 (ENSOTSG00005036007)	pknox2 (ENSOTSG00005036004)	ENSOTSG00005036003	ENSOTSG00005036001	robo3 (ENSOTSG00005035982)	msx2b (ENSOTSG00005035979)	drd1b (ENSOTSG00005035978)	RAD50 (ENSOTSG00005035558)	ENSOTSG00005035555	pou4f3 (ENSOTSG00005035554) #9	RBM27 (ENSOTSG00005035553) #10	LARS1 (ENSOTSG00005034165) #11	ENSOTSG00005034131 #12	kctd16b (ENSOTSG00005034129) #17	yipf5 (ENSOTSG00005034126) #18	NR3C1 (ENSOTSG00005033628) #22	ARHGAP26 (ENSOTSG00005033353) #23	ENSOTSG00005033351	spry4 (ENSOTSG00005033350) #25	ENSOTSG00005033347	ndfip1l (ENSOTSG00005033327) #26	endou2 (ENSOTSG00005033323)	RNF14 (ENSOTSG00005033319) #29	HSPA4 (ENSOTSG00005032063)	ENSOTSG00005032057	AFF4 (ENSOTSG00005032056)	ENSOTSG00005032055	septin8a (ENSOTSG00005031827)	CCNI2 (ENSOTSG00005031822)	GABRG2 (ENSOTSG00005031572)	gabra1 (ENSOTSG00005030588)
Chinook salmon	MODERN SPECIES	33	ENSOTSG00005047587	sema3h (ENSOTSG00005047586)	borcs6 (ENSOTSG00005047585)	si:dkey-72l14.3 (ENSOTSG00005047584)	xpc (ENSOTSG00005047583)	msx2b (ENSOTSG00005047582)	drd1b (ENSOTSG00005047581)	RAD50 (ENSOTSG00005047559)	ENSOTSG00005047548	pou4f3 (ENSOTSG00005047546) #9	RBM27 (ENSOTSG00005047543) #10	LARS1 (ENSOTSG00005047509) #11	ENSOTSG00005047502 #12	kctd16b (ENSOTSG00005047501) #17	yipf5 (ENSOTSG00005047500) #18	NR3C1 (ENSOTSG00005047485) #22	ARHGAP26 (ENSOTSG00005047450) #23	spry4 (ENSOTSG00005047441) #25	ndfip1l (ENSOTSG00005047437) #26	endou2 (ENSOTSG00005047435)	RNF14 (ENSOTSG00005047434) #29	HSPA4 (ENSOTSG00005047416)	ENSOTSG00005047415	AFF4 (ENSOTSG00005047414)	ENSOTSG00005047412	septin8a (ENSOTSG00005047396)	CCNI2 (ENSOTSG00005047395)	GABRG2 (ENSOTSG00005047325)	gabra1 (ENSOTSG00005047274)	GABRA6 (ENSOTSG00005047267)	GABRB2 (ENSOTSG00005047266)
Coho salmon	MODERN SPECIES	26	CPEB4 (ENSOKIG00005050275)	nsg2 (ENSOKIG00005050268)	ENSOKIG00005050265	msx2b (ENSOKIG00005050264)	drd1b (ENSOKIG00005050262)	RAD50 (ENSOKIG00005050222)	ENSOKIG00005050203	pou4f3 (ENSOKIG00005050198) #9	RBM27 (ENSOKIG00005050189) #10	LARS1 (ENSOKIG00005050108) #11	PLAC8L1 (ENSOKIG00005050072) #12	ENSOKIG00005050070	ENSOKIG00005050067	kctd16b (ENSOKIG00005050063) #17	yipf5 (ENSOKIG00005050061) #18	NR3C1 (ENSOKIG00005050038) #22	ARHGAP26 (ENSOKIG00005050019) #23	ENSOKIG00005050007	spry4 (ENSOKIG00005050005) #25	ndfip1l (ENSOKIG00005049998) #26	endou2 (ENSOKIG00005049988)	RNF14 (ENSOKIG00005049987) #29	RNF14 (ENSOKIG00005049985) #29	hspa4a (ENSOKIG00005049927)	zcchc10 (ENSOKIG00005049916)	AFF4 (ENSOKIG00005049901)	ENSOKIG00005049890	septin8a (ENSOKIG00005049697)	CCNI2 (ENSOKIG00005049631)	ENSOKIG00005049629	GABRG2 (ENSOKIG00005049503)
Huchen	MODERN SPECIES	1017														kctd16b (ENSHHUG00000030292) #17	yipf5 (ENSHHUG00000030294) #18	NR3C1 (ENSHHUG00000030304) #22	ENSHHUG00000030430 #23
Northern pike	MODERN SPECIES	6	nsg2 (ENSELUG00000022939)	ENSELUG00000032902	msx2b (ENSELUG00000034610)	drd1b (ENSELUG00000022986)	RAD50 (ENSELUG00000023093)	ENSELUG00000031816	ENSELUG00000000982	pou4f3 (ENSELUG00000023118) #9	RBM27 (ENSELUG00000023148) #10	LARS1 (ENSELUG00000023311) #11	PLAC8L1 (ENSELUG00000023177) #12	GRXCR2 (ENSELUG00000000989) #14	kctd16b (ENSELUG00000023335) #17	ENSELUG00000027181	yipf5 (ENSELUG00000023350) #18	NR3C1 (ENSELUG00000023409) #22	ARHGAP26 (ENSELUG00000023519) #23	ARHGAP26 (ENSELUG00000029002) #23	fgf1b (ENSELUG00000023539)	spry4 (ENSELUG00000023554) #25	ndfip1l (ENSELUG00000033033) #26	endou2 (ENSELUG00000023584)	rnf14 (ENSELUG00000023620) #29	hspa4a (ENSELUG00000023695)	zcchc10 (ENSELUG00000023728)	AFF4 (ENSELUG00000023871)	ENSELUG00000024882	ENSELUG00000028348	ENSELUG00000023915	SOWAHA (ENSELUG00000023939)	septin8a (ENSELUG00000023981)
Acanthomorphata	ANCESTRAL SPECIES	10	ENSGT00940000154833.a	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Euacanthomorphacea	ANCESTRAL SPECIES	20	ENSGT00940000154833.a	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Percomorphaceae	ANCESTRAL SPECIES	9	ENSGT00940000154833.a	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Percomorphaceae_B	ANCESTRAL SPECIES	10	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Ovalentaria	ANCESTRAL SPECIES	11	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Ovalentaria_B	ANCESTRAL SPECIES	16	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Pomacentridae	ANCESTRAL SPECIES	10	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Pomacentridae_A	ANCESTRAL SPECIES	3	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00940000168656	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Spiny chromis	MODERN SPECIES	1636														kctd16b (ENSAPOG00000016476) #17	yipf5 (ENSAPOG00000016486) #18	ENSAPOG00000016514 #22
Amphiprion	ANCESTRAL SPECIES	3	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00940000168656	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Orange clownfish	MODERN SPECIES	6	ENSAPEG00000017271	ENSAPEG00000017302	CPEB4 (ENSAPEG00000017337)	nsg2 (ENSAPEG00000017380)	msx2b (ENSAPEG00000017453)	drd1b (ENSAPEG00000017467)	RAD50 (ENSAPEG00000017535)	ENSAPEG00000017640	pou4f3 (ENSAPEG00000017661) #9	RBM27 (ENSAPEG00000017681) #10	LARS1 (ENSAPEG00000017720) #11	PLAC8L1 (ENSAPEG00000017823) #12	GRXCR2 (ENSAPEG00000017834) #14	kctd16b (ENSAPEG00000017863) #17	yipf5 (ENSAPEG00000017896) #18	NR3C1 (ENSAPEG00000017923) #22	ARHGAP26 (ENSAPEG00000017953) #23	ENSAPEG00000018031	spry4 (ENSAPEG00000018043) #25	ndfip1l (ENSAPEG00000018059) #26	endou2 (ENSAPEG00000018083)	rnf14 (ENSAPEG00000018135) #29	hspa4a (ENSAPEG00000018179)	ENSAPEG00000018258	AFF4 (ENSAPEG00000018275)	ENSAPEG00000018318	SOWAHA (ENSAPEG00000018334)	septin8a (ENSAPEG00000018357)	CCNI2 (ENSAPEG00000018394)	GABRG2 (ENSAPEG00000018442)	gabra1 (ENSAPEG00000018467)
Clown anemonefish	MODERN SPECIES	1427						drd1b (ENSAOCG00000001134)	RAD50 (ENSAOCG00000016671)	ENSAOCG00000016712	pou4f3 (ENSAOCG00000016725) #9	RBM27 (ENSAOCG00000016767) #10	LARS1 (ENSAOCG00000016931) #11	PLAC8L1 (ENSAOCG00000016955) #12	GRXCR2 (ENSAOCG00000016968) #14	kctd16b (ENSAOCG00000016975) #17	yipf5 (ENSAOCG00000017000) #18	ENSAOCG00000001170 #22
Bicolor damselfish	MODERN SPECIES	1207														kctd16b (ENSSPAG00000008526) #17	yipf5 (ENSSPAG00000008514) #18	NR3C1 (ENSSPAG00000008475) #22
Cichlidae	ANCESTRAL SPECIES	4	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Pseudocrenilabrinae	ANCESTRAL SPECIES	14	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00940000154851.A.p	ENSGT00940000168817.p.a.a.a	ENSGT00390000018781	ENSGT00940000176998.b	ENSGT00940000176998.a.b	ENSGT00940000176998.a.a.a	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	22	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998.a.b	ENSGT00940000176998.a.a.a	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Haplochromini	ANCESTRAL SPECIES	8	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998.a.b	ENSGT00940000176998.a.a.a	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Burton s mouthbrooder	MODERN SPECIES	675																nr3c1 (ENSHBUG00000022339) #22	ARHGAP26 (ENSHBUG00000022295) #23	fgf1b (ENSHBUG00000022171)	spry4 (ENSHBUG00000022165) #25	ndfip1l (ENSHBUG00000022149) #26	rnf14 (ENSHBUG00000022134) #29	hspa4a (ENSHBUG00000022116)	ENSHBUG00000021997	AFF4 (ENSHBUG00000021987)	ENSHBUG00000021962	ENSHBUG00000021938	septin8a (ENSHBUG00000021911)	CCNI2 (ENSHBUG00000021802)
Haplochromini_A	ANCESTRAL SPECIES	6	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998.a.b	ENSGT00940000176998.a.a.a	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Haplochromini_B	ANCESTRAL SPECIES	16	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000176922.B.b.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998.a.b	ENSGT00940000176998.a.a.a	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Eastern happy	MODERN SPECIES	1	nsg2 (ENSACLG00000010097)	ENSACLG00000010108	msx2b (ENSACLG00000010113)	drd1b (ENSACLG00000010438)	RAD50 (ENSACLG00000010459)	ENSACLG00000010597	ENSACLG00000010633	ENSACLG00000010747	pou4f3 (ENSACLG00000010777) #9	RBM27 (ENSACLG00000010782) #10	LARS1 (ENSACLG00000010881) #11	PLAC8L1 (ENSACLG00000011049) #12	GRXCR2 (ENSACLG00000011061) #14	kctd16b (ENSACLG00000011152) #17	yipf5 (ENSACLG00000011153) #18	NR3C1 (ENSACLG00000011372) #22	ARHGAP26 (ENSACLG00000011418) #23	ENSACLG00000011470	spry4 (ENSACLG00000011478) #25	ndfip1l (ENSACLG00000011694) #26	endou2 (ENSACLG00000011700)	rnf14 (ENSACLG00000011718) #29	hspa4a (ENSACLG00000011771)	zcchc10 (ENSACLG00000011863)	AFF4 (ENSACLG00000011879)	ENSACLG00000011946	ENSACLG00000011984	septin8a (ENSACLG00000012018)	CCNI2 (ENSACLG00000012033)	GABRG2 (ENSACLG00000012156)	gabra1 (ENSACLG00000012229)
Zebra mbuna	MODERN SPECIES	1092	CPEB4 (ENSMZEG00005002361)	nsg2 (ENSMZEG00005002426)	ENSMZEG00005002440	msx2b (ENSMZEG00005002448)	drd1b (ENSMZEG00005002456)	RAD50 (ENSMZEG00005002481)	ENSMZEG00005002560	ENSMZEG00005002579	pou4f3 (ENSMZEG00005002620) #9	RBM27 (ENSMZEG00005002635) #10	LARS1 (ENSMZEG00005002662) #11	ENSMZEG00005002751 #12	GRXCR2 (ENSMZEG00005002759) #14	kctd16b (ENSMZEG00005002773) #17	yipf5 (ENSMZEG00005002809) #18	NR3C1 (ENSMZEG00005002837) #22	ARHGAP26 (ENSMZEG00005002884) #23	fgf1b (ENSMZEG00005002955)	spry4 (ENSMZEG00005002964) #25	ndfip1l (ENSMZEG00005002978) #26	endou2 (ENSMZEG00005002993)	rnf14 (ENSMZEG00005003001) #29	hspa4a (ENSMZEG00005003031)	ENSMZEG00005003199	AFF4 (ENSMZEG00005003218)	ENSMZEG00005003270	ENSMZEG00005003293	septin8a (ENSMZEG00005003308)	CCNI2 (ENSMZEG00005003334)	ENSMZEG00005003363	ENSMZEG00005003402
P. nyererei	MODERN SPECIES	321	CPEB4 (ENSPNYG00000015536)	nsg2 (ENSPNYG00000015522)	msx2b (ENSPNYG00000015511)	drd1b (ENSPNYG00000015490)	RAD50 (ENSPNYG00000015413)	ENSPNYG00000015398	ENSPNYG00000015384	ENSPNYG00000015372	pou4f3 (ENSPNYG00000015362) #9	RBM27 (ENSPNYG00000015348) #10	LARS1 (ENSPNYG00000015254) #11	PLAC8L1 (ENSPNYG00000015218) #12	GRXCR2 (ENSPNYG00000015199) #14	kctd16b (ENSPNYG00000015182) #17	yipf5 (ENSPNYG00000015166) #18	NR3C1 (ENSPNYG00000015102) #22	ARHGAP26 (ENSPNYG00000015053) #23	fgf1b (ENSPNYG00000015037)	spry4 (ENSPNYG00000015015) #25	ndfip1l (ENSPNYG00000015004) #26	endou2 (ENSPNYG00000014962)	rnf14 (ENSPNYG00000014948) #29	hspa4a (ENSPNYG00000014879)	ENSPNYG00000014848	AFF4 (ENSPNYG00000014804)	ENSPNYG00000014768	ENSPNYG00000014745	septin8a (ENSPNYG00000014720)	CCNI2 (ENSPNYG00000014693)	GABRG2 (ENSPNYG00000014341)	gabra1 (ENSPNYG00000013948)
Lyretail cichlid	MODERN SPECIES	297	ENSNBRG00000005374	CPEB4 (ENSNBRG00000005452)	nsg2 (ENSNBRG00000005492)	msx2b (ENSNBRG00000005507)	drd1b (ENSNBRG00000005539)	RAD50 (ENSNBRG00000005598)	ENSNBRG00000005689	ENSNBRG00000005720	pou4f3 (ENSNBRG00000005732) #9	RBM27 (ENSNBRG00000005739) #10	LARS1 (ENSNBRG00000005764) #11	PLAC8L1 (ENSNBRG00000005887) #12	GRXCR2 (ENSNBRG00000005914) #14	kctd16b (ENSNBRG00000005936) #17	yipf5 (ENSNBRG00000005967) #18	NR3C1 (ENSNBRG00000005976) #22	ARHGAP26 (ENSNBRG00000006023) #23	fgf1b (ENSNBRG00000006086)	spry4 (ENSNBRG00000006099) #25	ndfip1l (ENSNBRG00000006121) #26	endou2 (ENSNBRG00000006137)	rnf14 (ENSNBRG00000006194) #29	hspa4a (ENSNBRG00000006219)	ENSNBRG00000006271	ENSNBRG00000006285	AFF4 (ENSNBRG00000006303)	ENSNBRG00000006340	SOWAHA (ENSNBRG00000006356)	septin8a (ENSNBRG00000006377)	CCNI2 (ENSNBRG00000006398)	GABRG2 (ENSNBRG00000006435)
Nile tilapia	MODERN SPECIES	1	CPEB4 (ENSONIG00000008518)	nsg2 (ENSONIG00000033713)	msx2b (ENSONIG00000042795)	RAD50 (ENSONIG00000008512)	ENSONIG00000041807	ENSONIG00000029234	ENSONIG00000036408	ENSONIG00000042767	pou4f3 (ENSONIG00000036406) #9	RBM27 (ENSONIG00000008506) #10	LARS1 (ENSONIG00000008493) #11	PLAC8L1 (ENSONIG00000033374) #12	GRXCR2 (ENSONIG00000008490) #14	kctd16b (ENSONIG00000008488) #17	yipf5 (ENSONIG00000008486) #18	NR3C1 (ENSONIG00000008483) #22	ARHGAP26 (ENSONIG00000008473) #23	fgf1 (ENSONIG00000034360)	spry4 (ENSONIG00000031453) #25	ndfip1l (ENSONIG00000008465) #26	endou2 (ENSONIG00000008463)	rnf14 (ENSONIG00000008460) #29	hspa4a (ENSONIG00000008454)	zcchc10 (ENSONIG00000034478)	AFF4 (ENSONIG00000008446)	ENSONIG00000038607	ENSONIG00000028267	septin8a (ENSONIG00000008438)	CCNI2 (ENSONIG00000008437)	GABRG2 (ENSONIG00000008436)	gabra1 (ENSONIG00000008432)
Midas cichlid	MODERN SPECIES	469														kctd16b (ENSACIG00000011116) #17	yipf5 (ENSACIG00000011102) #18	NR3C1 (ENSACIG00000010799) #22	ARHGAP26 (ENSACIG00000010729) #23	fgf1b (ENSACIG00000010719)	spry4 (ENSACIG00000010709) #25	NDFIP1 (ENSACIG00000010692) #26	endou2 (ENSACIG00000010671)	rnf14 (ENSACIG00000010648) #29	hspa4a (ENSACIG00000010612)	zcchc10 (ENSACIG00000010605)	ENSACIG00000010592	AFF4 (ENSACIG00000010525)	ENSACIG00000010486	ENSACIG00000010472	septin8a (ENSACIG00000009699)	CCNI2 (ENSACIG00000009603)	GABRG2 (ENSACIG00000009566)
Atherinomorphae	ANCESTRAL SPECIES	14	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Cyprinodontiformes	ANCESTRAL SPECIES	11	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Aplocheiloidei	ANCESTRAL SPECIES	35	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00940000168656	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Mangrove rivulus	MODERN SPECIES	58	FHL1 (ENSKMAG00000009292)	ENSKMAG00000009317	ENSKMAG00000009356	CPEB4 (ENSKMAG00000009453)	nsg2 (ENSKMAG00000009551)	msx2b (ENSKMAG00000009572)	drd1b (ENSKMAG00000009582)	RAD50 (ENSKMAG00000009633)	pou4f3 (ENSKMAG00000009766) #9	RBM27 (ENSKMAG00000009801) #10	LARS1 (ENSKMAG00000009903) #11	PLAC8L1 (ENSKMAG00000010005) #12	GRXCR2 (ENSKMAG00000010041) #14	kctd16b (ENSKMAG00000010051) #17	yipf5 (ENSKMAG00000010061) #18	NR3C1 (ENSKMAG00000010085) #22	ARHGAP26 (ENSKMAG00000010140) #23	fgf1b (ENSKMAG00000010169)	spry4 (ENSKMAG00000010183) #25	ndfip1l (ENSKMAG00000010223) #26	endou2 (ENSKMAG00000010243)	rnf14 (ENSKMAG00000010260) #29	hspa4a (ENSKMAG00000010299)	ENSKMAG00000010417	AFF4 (ENSKMAG00000010443)	ENSKMAG00000010515	ENSKMAG00000010558	septin8a (ENSKMAG00000010785)	CCNI2 (ENSKMAG00000010841)	GABRG2 (ENSKMAG00000010884)	gabra1 (ENSKMAG00000010965)
Turquoise killifish	MODERN SPECIES	1620	ADAD2 (ENSNFUG00015006704)	CPEB4 (ENSNFUG00015006677)	HMP19 (ENSNFUG00015006668)	msx2b (ENSNFUG00015006664)	ENSNFUG00015006663	RAD50 (ENSNFUG00015006436)	ENSNFUG00015006399	POU4F3 (ENSNFUG00015006394) #9	RBM27 (ENSNFUG00015006341) #10	LARS1 (ENSNFUG00015004999) #11	PLAC8L1 (ENSNFUG00015024837) #12	ENSNFUG00015024833	GRXCR2 (ENSNFUG00015024830) #14	kctd16b (ENSNFUG00015024828) #17	YIPF5 (ENSNFUG00015024825) #18	NR3C1 (ENSNFUG00015024817) #22	ARHGAP26 (ENSNFUG00015024664) #23	ENSNFUG00015024647	SPRY4 (ENSNFUG00015024644) #25	ENSNFUG00015024641	ndfip1l (ENSNFUG00015024638) #26	endou2 (ENSNFUG00015024637)	RNF14 (ENSNFUG00015024636) #29	hspa4a (ENSNFUG00015024519)	ENSNFUG00015024502	pitx1 (ENSNFUG00015024490)	H2AFY (ENSNFUG00015024478)	C21H5ORF4 (ENSNFUG00015024469)	LARP1 (ENSNFUG00015024238)	zgc:56585 (ENSNFUG00015024214)	ZNF346 (ENSNFUG00015024210)
Cyprinodontoidei	ANCESTRAL SPECIES	5	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Poeciliinae	ANCESTRAL SPECIES	17	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Poecilia	ANCESTRAL SPECIES	7	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
NAME_6	ANCESTRAL SPECIES	1	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Amazon molly	MODERN SPECIES	383													GRXCR2 (ENSPFOG00000005679) #14	kctd16b (ENSPFOG00000005777) #17	yipf5 (ENSPFOG00000005795) #18	NR3C1 (ENSPFOG00000005866) #22	ARHGAP26 (ENSPFOG00000006010) #23	ENSPFOG00000006585	spry4 (ENSPFOG00000023649) #25	spry4 (ENSPFOG00000023174) #25	ndfip1l (ENSPFOG00000006628) #26	endou2 (ENSPFOG00000006713)	rnf14 (ENSPFOG00000006823) #29	hspa4a (ENSPFOG00000006901)	zcchc10 (ENSPFOG00000007040)	AFF4 (ENSPFOG00000007079)	ENSPFOG00000007375	ENSPFOG00000020752	septin8a (ENSPFOG00000007433)	CCNI2 (ENSPFOG00000007711)	GABRG2 (ENSPFOG00000007767)
Sailfin molly	MODERN SPECIES	405												cherp (ENSPLAG00000003350)	ENSPLAG00000003334	kctd16b (ENSPLAG00000003328) #17	yipf5 (ENSPLAG00000003310) #18	NR3C1 (ENSPLAG00000003268) #22	ARHGAP26 (ENSPLAG00000003197) #23	ENSPLAG00000003072
Guppy	MODERN SPECIES	444	fhl1b (ENSPREG00000006263)	ENSPREG00000006255	ENSPREG00000006236	CPEB4 (ENSPREG00000006171)	nsg2 (ENSPREG00000006151)	msx2b (ENSPREG00000006136)	drd1b (ENSPREG00000006121)	RAD50 (ENSPREG00000005887)	pou4f3 (ENSPREG00000005851) #9	RBM27 (ENSPREG00000005827) #10	LARS1 (ENSPREG00000005668) #11	PLAC8L1 (ENSPREG00000005648) #12	GRXCR2 (ENSPREG00000005637) #14	kctd16b (ENSPREG00000005626) #17	yipf5 (ENSPREG00000005606) #18	NR3C1 (ENSPREG00000005578) #22	ARHGAP26 (ENSPREG00000005509) #23	ENSPREG00000005482	spry4 (ENSPREG00000005469) #25	ndfip1l (ENSPREG00000005437) #26	endou2 (ENSPREG00000005404)	rnf14 (ENSPREG00000005379) #29	hspa4a (ENSPREG00000005344)	zcchc10 (ENSPREG00000005328)	AFF4 (ENSPREG00000005287)	ENSPREG00000005274	ENSPREG00000005270	septin8a (ENSPREG00000005238)	CCNI2 (ENSPREG00000005203)	GABRG2 (ENSPREG00000005126)	gabra1 (ENSPREG00000005068)
Platyfish	MODERN SPECIES	2	ENSXMAG00000000303	ENSXMAG00000000301	CPEB4 (ENSXMAG00000000294)	nsg2 (ENSXMAG00000000291)	msx2b (ENSXMAG00000025273)	drd1b (ENSXMAG00000020293)	RAD50 (ENSXMAG00000001353)	pou4f3 (ENSXMAG00000023685) #9	pou4f3 (ENSXMAG00000028993) #9	RBM27 (ENSXMAG00000001413) #10	LARS1 (ENSXMAG00000001454) #11	PLAC8L1 (ENSXMAG00000028460) #12	GRXCR2 (ENSXMAG00000001509) #14	kctd16b (ENSXMAG00000001512) #17	yipf5 (ENSXMAG00000001514) #18	NR3C1 (ENSXMAG00000001522) #22	ARHGAP26 (ENSXMAG00000001526) #23	ENSXMAG00000001555	spry4 (ENSXMAG00000029964) #25	ndfip1l (ENSXMAG00000029155) #26	endou2 (ENSXMAG00000001569)	rnf14 (ENSXMAG00000001585) #29	hspa4a (ENSXMAG00000001608)	zcchc10 (ENSXMAG00000025729)	AFF4 (ENSXMAG00000001642)	ENSXMAG00000001683	SOWAHA (ENSXMAG00000023309)	septin8a (ENSXMAG00000001689)	CCNI2 (ENSXMAG00000001709)	GABRG2 (ENSXMAG00000001711)	gabra1 (ENSXMAG00000012611)
NAME_4	ANCESTRAL SPECIES	12	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Mummichog	MODERN SPECIES	2361														kctd16b (ENSFHEG00000004839) #17	yipf5 (ENSFHEG00000004828) #18	NR3C1 (ENSFHEG00000004809) #22	ARHGAP26 (ENSFHEG00000004749) #23	fgf1b (ENSFHEG00000004722)	ENSFHEG00000004700	spry4 (ENSFHEG00000004686) #25	ndfip1l (ENSFHEG00000004674) #26	endou2 (ENSFHEG00000004652)	rnf14 (ENSFHEG00000004644) #29	hspa4a (ENSFHEG00000004628)	zcchc10 (ENSFHEG00000004550)	AFF4 (ENSFHEG00000004526)	ENSFHEG00000004475	SOWAHA (ENSFHEG00000004469)	septin8a (ENSFHEG00000004452)	CCNI2 (ENSFHEG00000004412)	ENSFHEG00000004398
Sheepshead minnow	MODERN SPECIES	589						drd1b (ENSCVAG00000014316)	RAD50 (ENSCVAG00000014463)	ENSCVAG00000014527	pou4f3 (ENSCVAG00000014545) #9	RBM27 (ENSCVAG00000014585) #10	LARS1 (ENSCVAG00000014685) #11	PLAC8L1 (ENSCVAG00000014696) #12	GRXCR2 (ENSCVAG00000014703) #14	kctd16b (ENSCVAG00000014716) #17	yipf5 (ENSCVAG00000014738) #18	NR3C1 (ENSCVAG00000014759) #22
Oryzias	ANCESTRAL SPECIES	14	ENSGT00940000154833.a.d	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Oryzias_b	ANCESTRAL SPECIES	13	ENSGT00940000154833.a.d	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Indian medaka	MODERN SPECIES	4	FHL1 (ENSOMEG00000006186)	ENSOMEG00000006143	ENSOMEG00000006103	CPEB4 (ENSOMEG00000000138)	nsg2 (ENSOMEG00000006017)	msx2b (ENSOMEG00000006003)	drd1b (ENSOMEG00000005994)	RAD50 (ENSOMEG00000005935)	pou4f3 (ENSOMEG00000005808) #9	RBM27 (ENSOMEG00000005785) #10	LARS1 (ENSOMEG00000005677) #11	PLAC8L1 (ENSOMEG00000005569) #12	GRXCR2 (ENSOMEG00000005551) #14	kctd16b (ENSOMEG00000005525) #17	yipf5 (ENSOMEG00000005512) #18	NR3C1 (ENSOMEG00000005484) #22	ARHGAP26 (ENSOMEG00000000119) #23	ENSOMEG00000005336	spry4 (ENSOMEG00000005320) #25	ndfip1l (ENSOMEG00000005304) #26	endou2 (ENSOMEG00000005264)	rnf14 (ENSOMEG00000005243) #29	hspa4a (ENSOMEG00000005193)	zcchc10 (ENSOMEG00000005102)	AFF4 (ENSOMEG00000005078)	ENSOMEG00000005013	ENSOMEG00000000109	septin8a (ENSOMEG00000004959)	CCNI2 (ENSOMEG00000004930)	GABRG2 (ENSOMEG00000004910)	gabra1 (ENSOMEG00000004870)
Javanese ricefish	MODERN SPECIES	5	slc9a6b (ENSOJAG00000010572)	FHL1 (ENSOJAG00000011094)	ENSOJAG00000011112	CPEB4 (ENSOJAG00000011160)	nsg2 (ENSOJAG00000011373)	msx2b (ENSOJAG00000011395)	drd1b (ENSOJAG00000011402)	RAD50 (ENSOJAG00000011480)	pou4f3 (ENSOJAG00000012111) #9	RBM27 (ENSOJAG00000012123) #10	LARS1 (ENSOJAG00000012350) #11	PLAC8L1 (ENSOJAG00000013679) #12	GRXCR2 (ENSOJAG00000013688) #14	kctd16b (ENSOJAG00000013698) #17	yipf5 (ENSOJAG00000013710) #18	NR3C1 (ENSOJAG00000013765) #22	ARHGAP26 (ENSOJAG00000013998) #23	ENSOJAG00000014311	spry4 (ENSOJAG00000014322) #25	ndfip1l (ENSOJAG00000014339) #26	endou2 (ENSOJAG00000014466)	rnf14 (ENSOJAG00000014491) #29	hspa4a (ENSOJAG00000014533)	ENSOJAG00000014970	AFF4 (ENSOJAG00000014976)	ENSOJAG00000014993	ENSOJAG00000014998	ENSOJAG00000015017	SOWAHA (ENSOJAG00000015024)	septin8a (ENSOJAG00000015153)	CCNI2 (ENSOJAG00000001727)
Oryzias_a	ANCESTRAL SPECIES	2	ENSGT00940000154833.a.d	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00940000168656	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Japanese Medaka HdrR	MODERN SPECIES	5	ENSORLG00000001741	ENSORLG00000001727	ENSORLG00000001719	CPEB4 (ENSORLG00000001711)	nsg2 (ENSORLG00000026648)	ENSORLG00000026903	drd1b (ENSORLG00000001681)	RAD50 (ENSORLG00000001678)	pou4f3 (ENSORLG00000001657) #9	RBM27 (ENSORLG00000001645) #10	LARS1 (ENSORLG00000001622) #11	PLAC8L1 (ENSORLG00000026879) #12	GRXCR2 (ENSORLG00000001588) #14	kctd16b (ENSORLG00000001580) #17	yipf5 (ENSORLG00000001576) #18	NR3C1 (ENSORLG00000001565) #22	ARHGAP26 (ENSORLG00000001552) #23	ENSORLG00000001499	spry4 (ENSORLG00000001490) #25	ndfip1l (ENSORLG00000001479) #26	endou2 (ENSORLG00000001471)	rnf14 (ENSORLG00000001462) #29	hspa4a (ENSORLG00000001448)	ENSORLG00000001372	AFF4 (ENSORLG00000001361)	ENSORLG00000030255	ENSORLG00000028838	septin8a (ENSORLG00000001313)	CCNI2 (ENSORLG00000001274)	GABRG2 (ENSORLG00000001267)	gabra1 (ENSORLG00000027019)
Chinese medaka	MODERN SPECIES	365														kctd16b (ENSOSIG00000014647) #17	yipf5 (ENSOSIG00000014643) #18	NR3C1 (ENSOSIG00000014612) #22	ARHGAP26 (ENSOSIG00000007499) #23	fgf1b (ENSOSIG00000007442)	spry4 (ENSOSIG00000007440) #25	ndfip1l (ENSOSIG00000007100) #26	endou2 (ENSOSIG00000007095)	HSPA4 (ENSOSIG00000005190)	rnf14 (ENSOSIG00000005149) #29
Percomorphaceae_C	ANCESTRAL SPECIES	10	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Eupercaria	ANCESTRAL SPECIES	17	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Tetraodontidae	ANCESTRAL SPECIES	6	ENSGT00940000154833.a	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a.g	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Tetraodon	MODERN SPECIES	22	slc9a6b (ENSTNIG00000018224)	fhl1b (ENSTNIG00000018223)	ENSTNIG00000018222	CPEB4 (ENSTNIG00000018221)	nsg2 (ENSTNIG00000018220)	msx2b (ENSTNIG00000018219)	drd1b (ENSTNIG00000018218)	RAD50 (ENSTNIG00000018217)	pou4f3 (ENSTNIG00000018216) #9	RBM27 (ENSTNIG00000018215) #10	LARS1 (ENSTNIG00000018214) #11	PLAC8L1 (ENSTNIG00000018213) #12	GRXCR2 (ENSTNIG00000018212) #14	kctd16b (ENSTNIG00000018211) #17	yipf5 (ENSTNIG00000018210) #18	NR3C1 (ENSTNIG00000018209) #22	ARHGAP26 (ENSTNIG00000018208) #23	ENSTNIG00000018207	spry4 (ENSTNIG00000018206) #25	ndfip1l (ENSTNIG00000018205) #26	endou2 (ENSTNIG00000018204)	rnf14 (ENSTNIG00000018203) #29	ENSTNIG00000018202	AFF4 (ENSTNIG00000018201)	ENSTNIG00000018200	ENSTNIG00000018199	septin8a (ENSTNIG00000018198)	CCNI2 (ENSTNIG00000018197)	GABRG2 (ENSTNIG00000018196)	gabra1 (ENSTNIG00000018195)	GABRA6 (ENSTNIG00000018194)
Eupecaria_A	ANCESTRAL SPECIES	17	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Ballan wrasse	MODERN SPECIES	331					drd1b (ENSLBEG00000024953)	RAD50 (ENSLBEG00000025013)	ENSLBEG00000025102	pou4f3 (ENSLBEG00000025119) #9	RBM27 (ENSLBEG00000025151) #10	LARS1 (ENSLBEG00000025237) #11	PLAC8L1 (ENSLBEG00000025331) #12	ENSLBEG00000025345	GRXCR2 (ENSLBEG00000025363) #14	kctd16b (ENSLBEG00000025381) #17	yipf5 (ENSLBEG00000025400) #18	NR3C1 (ENSLBEG00000025423) #22	ARHGAP26 (ENSLBEG00000025480) #23	fgf1b (ENSLBEG00000025555)
Eupecaria_B	ANCESTRAL SPECIES	17	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Eupecaria_C	ANCESTRAL SPECIES	15	ENSGT00940000154833.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	12	ENSGT00940000153460.c.b.c.b	ENSGT00940000154833.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
European seabass	MODERN SPECIES	4	ENSDLAG00005029396	CPEB4 (ENSDLAG00005005608)	ENSDLAG00005029664	ENSDLAG00005029522	ENSDLAG00005006020	drd1b (ENSDLAG00005033496)	ENSDLAG00005006064	ENSDLAG00005006927	pou4f3 (ENSDLAG00005006938) #9	ENSDLAG00005006948 #10	LARS1 (ENSDLAG00005007002) #11	ENSDLAG00005007582	GRXCR2 (ENSDLAG00005007703) #14	kctd16b (ENSDLAG00005028013) #17	yipf5 (ENSDLAG00005007714) #18	NR3C1 (ENSDLAG00005007724) #22	ARHGAP26 (ENSDLAG00005007832) #23	ENSDLAG00005008529	SPRY4 (ENSDLAG00005030460) #25	NDFIP1 (ENSDLAG00005030480) #26	ENSDLAG00005008713	RNF14 (ENSDLAG00005008718) #29	hspa4a (ENSDLAG00005008744)	zcchc10 (ENSDLAG00005009210)	AFF4 (ENSDLAG00005009218)	ENSDLAG00005009264	septin8a (ENSDLAG00005009337)	SOWAHA (ENSDLAG00005009271)	ENSDLAG00005033087	GABRG2 (ENSDLAG00005011309)	gabra1 (ENSDLAG00005011616)
Large yellow croaker	MODERN SPECIES	493	tiprl (ENSLCRG00005011627)	ENSLCRG00005011631	msx2b (ENSLCRG00005011633)	ENSLCRG00005011634	drd1b (ENSLCRG00005011635)	RAD50 (ENSLCRG00005011645)	ENSLCRG00005011790	ENSLCRG00005011791	pou4f3 (ENSLCRG00005011794) #9	RBM27 (ENSLCRG00005011797) #10	PLAC8L1 (ENSLCRG00005012192) #12	CYP8B1 (ENSLCRG00005012193)	GRXCR2 (ENSLCRG00005012196) #14	kctd16b (ENSLCRG00005012198) #17	yipf5 (ENSLCRG00005012201) #18	NR3C1 (ENSLCRG00005012202) #22	ARHGAP26 (ENSLCRG00005012211) #23	fgf1b (ENSLCRG00005012521)	spry4 (ENSLCRG00005012523) #25	ndfip1l (ENSLCRG00005012534) #26	endou2 (ENSLCRG00005012696)	rnf14 (ENSLCRG00005012699) #29	hspa4a (ENSLCRG00005012711)	zcchc10 (ENSLCRG00005014402)	AFF4 (ENSLCRG00005014406)	ENSLCRG00005014418	SOWAHA (ENSLCRG00005014420)	septin8a (ENSLCRG00005014422)	CCNI2 (ENSLCRG00005014424)	GABRG2 (ENSLCRG00005014438)	gabra1 (ENSLCRG00005015321)
Gilthead seabream	MODERN SPECIES	4	ENSSAUG00010009836	CPEB4 (ENSSAUG00010009364)	nsg2 (ENSSAUG00010009354)	msx2b (ENSSAUG00010009353)	drd1b (ENSSAUG00010009352)	RAD50 (ENSSAUG00010008487)	ENSSAUG00010008480	ENSSAUG00010008477	pou4f3 (ENSSAUG00010008476) #9	RBM27 (ENSSAUG00010008475) #10	LARS1 (ENSSAUG00010005423) #11	PLAC8L1 (ENSSAUG00010005348) #12	GRXCR2 (ENSSAUG00010005347) #14	kctd16b (ENSSAUG00010005344) #17	yipf5 (ENSSAUG00010005340) #18	NR3C1 (ENSSAUG00010005098) #22	ARHGAP26 (ENSSAUG00010002443) #23	ENSSAUG00010002386	spry4 (ENSSAUG00010002384) #25	ndfip1l (ENSSAUG00010002216) #26	endou2 (ENSSAUG00010002197)	rnf14 (ENSSAUG00010002187) #29	hspa4a (ENSSAUG00010001704)	zcchc10 (ENSSAUG00010024362)	AFF4 (ENSSAUG00010024359)	ENSSAUG00010024357	SOWAHA (ENSSAUG00010024356)	septin8a (ENSSAUG00010024237)	CCNI2 (ENSSAUG00010024230)	ENSSAUG00010024227	tbl2 (ENSSAUG00010024225)
Perciformes	ANCESTRAL SPECIES	22	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Perciformes_a	ANCESTRAL SPECIES	20	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Pike perch	MODERN SPECIES	54	CPEB4 (ENSSLUG00000024891)	nsg2 (ENSSLUG00000024881)	msx2b (ENSSLUG00000024878)	drd1b (ENSSLUG00000024876)	RAD50 (ENSSLUG00000024776)	ENSSLUG00000024760	pou4f3 (ENSSLUG00000024758) #9	RBM27 (ENSSLUG00000024751) #10	LARS1 (ENSSLUG00000024724) #11	PLAC8L1 (ENSSLUG00000024713) #12	ENSSLUG00000024709	ENSSLUG00000024705	GRXCR2 (ENSSLUG00000024704) #14	kctd16b (ENSSLUG00000024700) #17	yipf5 (ENSSLUG00000024699) #18	NR3C1 (ENSSLUG00000024693) #22	ENSSLUG00000024690	ARHGAP26 (ENSSLUG00000024583) #23	fgf1b (ENSSLUG00000024524)	spry4 (ENSSLUG00000024520) #25	ndfip1l (ENSSLUG00000024510) #26	endou2 (ENSSLUG00000024506)	rnf14 (ENSSLUG00000024503) #29	hspa4a (ENSSLUG00000023959)	zcchc10 (ENSSLUG00000023883)	AFF4 (ENSSLUG00000023828)	ENSSLUG00000023807	SOWAHA (ENSSLUG00000023805)	septin8a (ENSSLUG00000023677)	CCNI2 (ENSSLUG00000023657)
Channel bull blenny	MODERN SPECIES	5	ENSCGOG00000007251	CPEB4 (ENSCGOG00000007253)	CPEB4 (ENSCGOG00000007257)	nsg2 (ENSCGOG00000007329)	msx2b (ENSCGOG00000007332)	drd1b (ENSCGOG00000007335)	RAD50 (ENSCGOG00000007389)	ENSCGOG00000008842	pou4f3 (ENSCGOG00000008847) #9	RBM27 (ENSCGOG00000008851) #10	LARS1 (ENSCGOG00000008893) #11	PLAC8L1 (ENSCGOG00000009099) #12	GRXCR2 (ENSCGOG00000009100) #14	kctd16b (ENSCGOG00000009102) #17	yipf5 (ENSCGOG00000009107) #18	NR3C1 (ENSCGOG00000009121) #22	ARHGAP26 (ENSCGOG00000009452) #23	ENSCGOG00000012107	spry4 (ENSCGOG00000012108) #25	ndfip1l (ENSCGOG00000012116) #26	endou2 (ENSCGOG00000012256)	rnf14 (ENSCGOG00000012262) #29	hspa4a (ENSCGOG00000012374)	zcchc10 (ENSCGOG00000016863)	AFF4 (ENSCGOG00000016867)	ENSCGOG00000016875	ENSCGOG00000016880	SOWAHA (ENSCGOG00000016881)	septin8a (ENSCGOG00000016990)	CCNI2 (ENSCGOG00000019522)	GABRG2 (ENSCGOG00000019544)
Cottioidei	ANCESTRAL SPECIES	10	ENSGT00940000170012	ENSGT01100000263491.a.b.a.a.b.b.b	ENSGT00940000160285	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Lumpfish	MODERN SPECIES	5	ENSCLMG00005012294	ENSCLMG00005012292	LTBP3 (ENSCLMG00005012257)	nsg2 (ENSCLMG00005012254)	ENSCLMG00005012253	ENSCLMG00005012252	drd1b (ENSCLMG00005012251)	RAD50 (ENSCLMG00005011823)	ENSCLMG00005011822	pou4f3 (ENSCLMG00005011821) #9	RBM27 (ENSCLMG00005011820) #10	LARS1 (ENSCLMG00005011773) #11	PLAC8L1 (ENSCLMG00005011763) #12	kctd16b (ENSCLMG00005011762) #17	yipf5 (ENSCLMG00005011761) #18	NR3C1 (ENSCLMG00005011759) #22	ARHGAP26 (ENSCLMG00005003832) #23	ENSCLMG00005003768	ndfip1l (ENSCLMG00005003702) #26	endou2 (ENSCLMG00005003700)	rnf14 (ENSCLMG00005003698) #29	hspa4a (ENSCLMG00005001879)	zcchc10 (ENSCLMG00005001857)	AFF4 (ENSCLMG00005001838)	ENSCLMG00005001837	ENSCLMG00005001836	septin8a (ENSCLMG00005001528)	CCNI2 (ENSCLMG00005017579)	GABRG2 (ENSCLMG00005017457)	gabra1 (ENSCLMG00005017336)	GABRA6 (ENSCLMG00005017312)
Stickleback	MODERN SPECIES	7	WDR44 (ENSGACG00000020710)	klhl13 (ENSGACG00000020711)	ENSGACG00000020712	LTBP3 (ENSGACG00000020713)	nsg2 (ENSGACG00000020714)	ENSGACG00000020715	drd1b (ENSGACG00000020716)	RAD50 (ENSGACG00000020717)	pou4f3 (ENSGACG00000020718) #9	RBM27 (ENSGACG00000020719) #10	LARS1 (ENSGACG00000020720) #11	PLAC8L1 (ENSGACG00000020721) #12	GRXCR2 (ENSGACG00000020722) #14	kctd16b (ENSGACG00000020723) #17	yipf5 (ENSGACG00000020724) #18	NR3C1 (ENSGACG00000020725) #22	ARHGAP26 (ENSGACG00000020726) #23	fgf1b (ENSGACG00000020727)	spry4 (ENSGACG00000020728) #25	ndfip1l (ENSGACG00000020729) #26	endou2 (ENSGACG00000020730)	rnf14 (ENSGACG00000020731) #29	hspa4a (ENSGACG00000020732)	zcchc10 (ENSGACG00000020733)	AFF4 (ENSGACG00000020734)	ENSGACG00000020735	ENSGACG00000020736	septin8a (ENSGACG00000020737)	CCNI2 (ENSGACG00000020738)	GABRG2 (ENSGACG00000020739)	gabra1 (ENSGACG00000020740)
Percomorphaceae_D	ANCESTRAL SPECIES	16	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Carangaria	ANCESTRAL SPECIES	16	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Carangaria_A	ANCESTRAL SPECIES	8	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Seriola	ANCESTRAL SPECIES	2	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Yellowtail amberjack	MODERN SPECIES	3182	ENSSLDG00000006535	ENSSLDG00000006567	CPEB4 (ENSSLDG00000006601)	nsg2 (ENSSLDG00000006661)	msx2b (ENSSLDG00000006681)	drd1b (ENSSLDG00000006695)	RAD50 (ENSSLDG00000006735)	ENSSLDG00000006869	pou4f3 (ENSSLDG00000006890) #9	RBM27 (ENSSLDG00000006922) #10	LARS1 (ENSSLDG00000007054) #11	PLAC8L1 (ENSSLDG00000007161) #12	GRXCR2 (ENSSLDG00000007195) #14	kctd16b (ENSSLDG00000007214) #17	yipf5 (ENSSLDG00000007233) #18	NR3C1 (ENSSLDG00000007270) #22	ARHGAP26 (ENSSLDG00000007338) #23	ENSSLDG00000007455	spry4 (ENSSLDG00000007475) #25	ndfip1l (ENSSLDG00000007502) #26	endou2 (ENSSLDG00000007540)	rnf14 (ENSSLDG00000007562) #29	hspa4a (ENSSLDG00000007611)	zcchc10 (ENSSLDG00000007657)	AFF4 (ENSSLDG00000007683)	ENSSLDG00000007763	SOWAHA (ENSSLDG00000007803)	septin8a (ENSSLDG00000007839)	CCNI2 (ENSSLDG00000007903)	GABRG2 (ENSSLDG00000007939)	gabra1 (ENSSLDG00000008029)
Greater amberjack	MODERN SPECIES	15	ENSSDUG00000020921	ENSSDUG00000020938	CPEB4 (ENSSDUG00000020954)	nsg2 (ENSSDUG00000020971)	msx2b (ENSSDUG00000020978)	drd1b (ENSSDUG00000020981)	RAD50 (ENSSDUG00000020997)	ENSSDUG00000021070	pou4f3 (ENSSDUG00000021077) #9	RBM27 (ENSSDUG00000021085) #10	LARS1 (ENSSDUG00000021142) #11	PLAC8L1 (ENSSDUG00000021214) #12	GRXCR2 (ENSSDUG00000021223) #14	kctd16b (ENSSDUG00000021240) #17	yipf5 (ENSSDUG00000021245) #18	NR3C1 (ENSSDUG00000021263) #22
Barramundi perch	MODERN SPECIES	94	nsg2 (ENSLCAG00010020158)	msx2b (ENSLCAG00010020157)	drd1b (ENSLCAG00010020156)	RAD50 (ENSLCAG00010020093)	ENSLCAG00010020048	ENSLCAG00010020044	ENSLCAG00010020043	pou4f3 (ENSLCAG00010020041) #9	RBM27 (ENSLCAG00010020035) #10	LARS1 (ENSLCAG00010019935) #11	PLAC8L1 (ENSLCAG00010019893) #12	CYP8B1 (ENSLCAG00010019891)	GRXCR2 (ENSLCAG00010019890) #14	kctd16b (ENSLCAG00010019888) #17	yipf5 (ENSLCAG00010019885) #18	NR3C1 (ENSLCAG00010019875) #22	ARHGAP26 (ENSLCAG00010019798) #23	ENSLCAG00010019779	spry4 (ENSLCAG00010019778) #25	ndfip1l (ENSLCAG00010019752) #26	endou2 (ENSLCAG00010019736)	rnf14 (ENSLCAG00010019733) #29	hspa4a (ENSLCAG00010018546)	zcchc10 (ENSLCAG00010018286)	AFF4 (ENSLCAG00010018272)	ENSLCAG00010018267	ENSLCAG00010018262	septin8a (ENSLCAG00010018253)	CCNI2 (ENSLCAG00010018242)	GABRG2 (ENSLCAG00010018198)	gabra1 (ENSLCAG00010018189)
Pleuronectoidei	ANCESTRAL SPECIES	23	ENSGT00940000154833.a	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Turbot	MODERN SPECIES	16	ENSSMAG00000001819	ENSSMAG00000001803	ENSSMAG00000001756	CPEB4 (ENSSMAG00000001696)	ENSSMAG00000027238	ENSSMAG00000004353	drd1b (ENSSMAG00000004335)	ENSSMAG00000004161	pou4f3 (ENSSMAG00000004151) #9	RBM27 (ENSSMAG00000004138) #10	LARS1 (ENSSMAG00000004078) #11	PLAC8L1 (ENSSMAG00000022953) #12	GRXCR2 (ENSSMAG00000004394) #14	kctd16b (ENSSMAG00000004410) #17	yipf5 (ENSSMAG00000004419) #18	NR3C1 (ENSSMAG00000004511) #22	ARHGAP26 (ENSSMAG00000004561) #23	ENSSMAG00000004597	SPRY4 (ENSSMAG00000004612) #25	NDFIP1 (ENSSMAG00000036948) #26	ENSSMAG00000004645	RNF14 (ENSSMAG00000004650) #29	hspa4a (ENSSMAG00000004662)	zcchc10 (ENSSMAG00000032607)	AFF4 (ENSSMAG00000004734)	ENSSMAG00000004815	SOWAHA (ENSSMAG00000004831)	septin8a (ENSSMAG00000004842)	CCNI2 (ENSSMAG00000004864)	GABRG2 (ENSSMAG00000004886)	gabra1 (ENSSMAG00000004920)
Tongue sole	MODERN SPECIES	10	btg3 (ENSCSEG00000013152)	cxadr (ENSCSEG00000013155)	ENSCSEG00000014671	CPEB4 (ENSCSEG00000014712)	nsg2 (ENSCSEG00000014763)	msx2b (ENSCSEG00000014773)	drd1b (ENSCSEG00000014779)	RAD50 (ENSCSEG00000014793)	pou4f3 (ENSCSEG00000014894) #9	RBM27 (ENSCSEG00000014910) #10	LARS1 (ENSCSEG00000014984) #11	PLAC8L1 (ENSCSEG00000015044) #12	GRXCR2 (ENSCSEG00000015051) #14	kctd16b (ENSCSEG00000015057) #17	yipf5 (ENSCSEG00000015061) #18	NR3C1 (ENSCSEG00000015073) #22	fstl4 (ENSCSEG00000015093)	ENSCSEG00000015139	C5orf15 (ENSCSEG00000015151)	vdac1 (ENSCSEG00000015156)	tcf7 (ENSCSEG00000015189)	skp1 (ENSCSEG00000015204)	PPP2CA (ENSCSEG00000015211)	ube2b (ENSCSEG00000015219)	cdkn2aipnl (ENSCSEG00000015222)	JADE2 (ENSCSEG00000015226)	sar1b (ENSCSEG00000015238)	SEC24A (ENSCSEG00000015247)	fhl1b (ENSCSEG00000015268)	ENSCSEG00000015339	ENSCSEG00000015350
Anabantaria	ANCESTRAL SPECIES	13	ENSGT00940000156341.e.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Zig-zag eel	MODERN SPECIES	5	ENSMAMG00000021355	ENSMAMG00000021358	CPEB4 (ENSMAMG00000021359)	ENSMAMG00000021360	ENSMAMG00000026156	drd1b (ENSMAMG00000021363)	ENSMAMG00000021367	ENSMAMG00000021380	pou4f3 (ENSMAMG00000021381) #9	RBM27 (ENSMAMG00000021382) #10	LARS1 (ENSMAMG00000021385) #11	PLAC8L1 (ENSMAMG00000021392) #12	GRXCR2 (ENSMAMG00000027184) #14	kctd16b (ENSMAMG00000021397) #17	yipf5 (ENSMAMG00000024924) #18	NR3C1 (ENSMAMG00000021400) #22	ARHGAP26 (ENSMAMG00000021404) #23	ENSMAMG00000021411	ENSMAMG00000008160	SPRY4 (ENSMAMG00000024910) #25	NDFIP1 (ENSMAMG00000027588) #26	ENSMAMG00000021425	RNF14 (ENSMAMG00000021429) #29	hspa4a (ENSMAMG00000021436)	zcchc10 (ENSMAMG00000021448)	AFF4 (ENSMAMG00000021453)	ENSMAMG00000021459	ENSMAMG00000021462	septin8a (ENSMAMG00000021464)	CCNI2 (ENSMAMG00000021468)	ENSMAMG00000025987
Anabantoidei	ANCESTRAL SPECIES	12	ENSGT00940000154833.a	ENSGT00940000166947	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000176998	ENSGT00940000160880 #9	ENSGT00510000046929.b #10	ENSGT00390000012163 #11	ENSGT00940000160864 #12	ENSGT00940000158849 #14	ENSGT00940000156071.b #17	ENSGT00940000153168.C.a.a #18	ENSGT00940000156385.b #22	ENSGT00940000157254.r #23	ENSGT00940000165035.b	ENSGT00950000183055.b.b #25	ENSGT00390000012721.a.g.a #26	ENSGT00530000063825.A.d	ENSGT00940000154507.s #29	ENSGT00940000156067.g.a	ENSGT00730000111200	ENSGT00950000182974.a.a.b	ENSGT00940000160656	ENSGT00950000183003.a.a.a.a.b.c	ENSGT00940000156068.i	ENSGT00940000162679	ENSGT00940000156685	ENSGT00940000159136
Siamese fighting fish	MODERN SPECIES	5	CPEB4 (ENSBSLG00000003844)	nsg2 (ENSBSLG00000003682)	msx2b (ENSBSLG00000003660)	ENSBSLG00000003569	drd1b (ENSBSLG00000003186)	RAD50 (ENSBSLG00000003028)	ENSBSLG00000003017	ENSBSLG00000003016	pou4f3 (ENSBSLG00000003014) #9	RBM27 (ENSBSLG00000003006) #10	LARS1 (ENSBSLG00000002547) #11	PLAC8L1 (ENSBSLG00000002418) #12	GRXCR2 (ENSBSLG00000002396) #14	kctd16b (ENSBSLG00000002377) #17	yipf5 (ENSBSLG00000002332) #18	NR3C1 (ENSBSLG00000025292) #22	ARHGAP26 (ENSBSLG00000025286) #23	spry4 (ENSBSLG00000025277) #25	ndfip1l (ENSBSLG00000025271) #26	endou2 (ENSBSLG00000025268)	rnf14 (ENSBSLG00000025265) #29	hspa4a (ENSBSLG00000025211)	zcchc10 (ENSBSLG00000025203)	AFF4 (ENSBSLG00000025201)	ENSBSLG00000025200	ENSBSLG00000025199	septin8a (ENSBSLG00000025151)	CCNI2 (ENSBSLG00000025141)	ENSBSLG00000025138	ENSBSLG00000025135	ENSBSLG00000025134
Climbing perch	MODERN SPECIES	5	ENSATEG00000010061	CPEB4 (ENSATEG00000010123)	ENSATEG00000027859	ENSATEG00000029651	drd1b (ENSATEG00000010207)	ENSATEG00000010239	ENSATEG00000010338	ENSATEG00000010350	pou4f3 (ENSATEG00000010368) #9	RBM27 (ENSATEG00000010385) #10	LARS1 (ENSATEG00000010441) #11	PLAC8L1 (ENSATEG00000010528) #12	GRXCR2 (ENSATEG00000010553) #14	kctd16b (ENSATEG00000010581) #17	yipf5 (ENSATEG00000010591) #18	NR3C1 (ENSATEG00000010600) #22	ARHGAP26 (ENSATEG00000010645) #23	ENSATEG00000010742	SPRY4 (ENSATEG00000025572) #25	NDFIP1 (ENSATEG00000010763) #26	ENSATEG00000010793	RNF14 (ENSATEG00000010831) #29	hspa4a (ENSATEG00000010850)	zcchc10 (ENSATEG00000010945)	AFF4 (ENSATEG00000010963)	ENSATEG00000010997	ENSATEG00000029418	septin8a (ENSATEG00000011056)	CCNI2 (ENSATEG00000011108)	GABRG2 (ENSATEG00000011122)	gabra1 (ENSATEG00000011169)
Tiger tail seahorse	MODERN SPECIES	214														kctd16b (ENSHCOG00000015646) #17	yipf5 (ENSHCOG00000015662) #18	NR3C1 (ENSHCOG00000015703) #22	ENSHCOG00000015715 #23	ARHGAP26 (ENSHCOG00000015763) #23	ENSHCOG00000016029	spry4 (ENSHCOG00000016045) #25	ndfip1l (ENSHCOG00000016063) #26	endou2 (ENSHCOG00000016078)	rnf14 (ENSHCOG00000016085) #29	hspa4a (ENSHCOG00000016162)	zcchc10 (ENSHCOG00000016175)	AFF4 (ENSHCOG00000016280)	ENSHCOG00000016300	SOWAHA (ENSHCOG00000016320)	septin8a (ENSHCOG00000016344)	CCNI2 (ENSHCOG00000016350)	GABRG2 (ENSHCOG00000016377)
Pinecone sodierfish	MODERN SPECIES	5	CPEB4 (ENSMMDG00005012479)	nsg2 (ENSMMDG00005012478)	ENSMMDG00005012475	msx2b (ENSMMDG00005012471)	drd1b (ENSMMDG00005012470)	ENSMMDG00005012469	RAD50 (ENSMMDG00005011294)	pou4f3 (ENSMMDG00005011267) #9	RBM27 (ENSMMDG00005011263) #10	LARS1 (ENSMMDG00005008561) #11	PLAC8L1 (ENSMMDG00005008509) #12	GRXCR2 (ENSMMDG00005008506) #14	ENSMMDG00005008503	kctd16b (ENSMMDG00005008499) #17	yipf5 (ENSMMDG00005008496) #18	NR3C1 (ENSMMDG00005008492) #22	ARHGAP26 (ENSMMDG00005008047) #23	fgf1b (ENSMMDG00005008008)	spry4 (ENSMMDG00005008005) #25	ndfip1l (ENSMMDG00005007999) #26	endou2 (ENSMMDG00005007993)	rnf14 (ENSMMDG00005007987) #29	hspa4a (ENSMMDG00005006586)	zcchc10 (ENSMMDG00005006555)	AFF4 (ENSMMDG00005006548)	ENSMMDG00005006546	SOWAHA (ENSMMDG00005006545)	septin8a (ENSMMDG00005006421)	CCNI2 (ENSMMDG00005006401)	GABRG2 (ENSMMDG00005006065)	gabra1 (ENSMMDG00005005810)
Cod	MODERN SPECIES	20	rabgef1 (ENSGMOG00000001896)	kctd7 (ENSGMOG00000001851)	ENSGMOG00000022322	ENSGMOG00000031139	myl10 (ENSGMOG00000001561)	ENSGMOG00000023269	ENSGMOG00000027793	ENSGMOG00000009714	ENSGMOG00000009685	ENSGMOG00000036113	ENSGMOG00000009654	ENSGMOG00000009643	ENSGMOG00000003896	ENSGMOG00000003930	YIPF5 (ENSGMOG00000004008) #18	NR3C1 (ENSGMOG00000017783) #22	ARHGAP26 (ENSGMOG00000011388) #23	ENSGMOG00000014435	ENSGMOG00000031561	NDFIP1 (ENSGMOG00000036711) #26	ENSGMOG00000008756	ENSGMOG00000024562	ENSGMOG00000008763 #29	hspa4a (ENSGMOG00000008775)	zcchc10 (ENSGMOG00000035001)	AFF4 (ENSGMOG00000029944)	ENSGMOG00000034457	SOWAHA (ENSGMOG00000033658)	septin8a (ENSGMOG00000008857)	CCNI2 (ENSGMOG00000008873)	ENSGMOG00000025175
Spotted gar	MODERN SPECIES	672	slc22a21 (ENSLOCG00000010344)	ENSLOCG00000010358	pdlim4 (ENSLOCG00000010368)	p4ha2 (ENSLOCG00000010375)	RAD50 (ENSLOCG00000010392)	kif3a (ENSLOCG00000010399)	pou4f3 (ENSLOCG00000010420) #9	RBM27 (ENSLOCG00000010426) #10	LARS1 (ENSLOCG00000010442) #11	ENSLOCG00000010451 #13	PLAC8L1 (ENSLOCG00000010461) #12	GRXCR2 (ENSLOCG00000010466) #14	PRELID2 (ENSLOCG00000010485) #15	kctd16b (ENSLOCG00000010491) #17	yipf5 (ENSLOCG00000010498) #18	nr3c1 (ENSLOCG00000010508) #22	ARHGAP26 (ENSLOCG00000010520) #23	FGF1 (ENSLOCG00000010543) #24	ndfip1l (ENSLOCG00000010551) #26	endou2 (ENSLOCG00000010565)	gnpda1 (ENSLOCG00000010571) #28	rnf14 (ENSLOCG00000010578) #29	hspa4b (ENSLOCG00000010589)	zcchc10 (ENSLOCG00000010604)	AFF4 (ENSLOCG00000010610)	uqcrq (ENSLOCG00000010627)	gdf9 (ENSLOCG00000010635)	ENSLOCG00000010639	SOWAHA (ENSLOCG00000010647)	septin8a (ENSLOCG00000010651)	CCNI2 (ENSLOCG00000010667)
Reedfish	MODERN SPECIES	2	ENSECRG00000008465	p4ha2 (ENSECRG00000008428)	ENSECRG00000008399	RAD50 (ENSECRG00000008371)	kif3a (ENSECRG00000008309)	pou4f3 (ENSECRG00000008275) #9	RBM27 (ENSECRG00000008253) #10	LARS1 (ENSECRG00000008180) #11	ENSECRG00000008158	PLAC8L1 (ENSECRG00000008142) #12	SH3RF2 (ENSECRG00000008126) #13	GRXCR2 (ENSECRG00000008117) #14	PRELID2 (ENSECRG00000008100) #15	kctd16b (ENSECRG00000008089) #17	yipf5 (ENSECRG00000008055) #18	nr3c1 (ENSECRG00000008039) #22	ARHGAP26 (ENSECRG00000008023) #23	FGF1 (ENSECRG00000007992) #24	spry4 (ENSECRG00000007982) #25	ndfip1l (ENSECRG00000007968) #26	endou2 (ENSECRG00000007952)	gnpda1 (ENSECRG00000007935) #28	rnf14 (ENSECRG00000007922) #29	hspa4b (ENSECRG00000007900)	ZCCHC10 (ENSECRG00000007885)	AFF4 (ENSECRG00000007860)	uqcrq (ENSECRG00000007848)	gdf9 (ENSECRG00000007841)	ENSECRG00000007827	SOWAHA (ENSECRG00000014563)	septin8a (ENSECRG00000014339)