Pomacentridae	ANCESTRAL SPECIES	35	ENSGT00390000010045.s #7	ENSGT00950000183182.a.a #8	ENSGT00940000156592 #9	ENSGT00940000153295.a.a #10	ENSGT00390000016054.b.i #11	ENSGT00390000015364.b #12	ENSGT00940000157291 #13	ENSGT00940000156762 #14	ENSGT00990000204035 #15	ENSGT00990000203803 #16	ENSGT00940000155107.a.a.a #17	ENSGT00940000159465 #18	ENSGT00940000158915 #19	ENSGT00390000001737 #20	ENSGT00940000166129 #21	ENSGT00390000004808.e #22	ENSGT00950000182986.b #23	ENSGT00940000154096.b.b.b.b.b #24	ENSGT00940000160627 #25	ENSGT00950000183163.a.a.ab #26	ENSGT00950000182941.a.a.b.e.a.b #27	ENSGT00940000159398 #28	ENSGT00940000156553.f #29	ENSGT00390000003012 #30	ENSGT00810000125524 #31	ENSGT00940000158871 #32	ENSGT00950000183028.a.b.a #33	ENSGT00390000005813 #34	ENSGT00940000165372 #35	ENSGT00950000183031.A.a.a #36	ENSGT00390000017974.nb #37
Pomacentridae_A	ANCESTRAL SPECIES	16	ENSGT00530000063770.c.a	ENSGT00390000010045.s #7	ENSGT00950000183182.a.a #8	ENSGT00940000156592 #9	ENSGT00940000153295.a.a #10	ENSGT00390000016054.b.i #11	ENSGT00390000015364.b #12	ENSGT00940000157291 #13	ENSGT00940000156762 #14	ENSGT00990000204035 #15	ENSGT00940000155107.a.a.a #17	ENSGT00940000159465 #18	ENSGT00940000158915 #19	ENSGT00390000001737 #20	ENSGT00940000166129 #21	ENSGT00390000004808.e #22	ENSGT00950000182986.b #23	ENSGT00940000154096.b.b.b.b.b #24	ENSGT00940000160627 #25	ENSGT00950000183163.a.a.ab #26	ENSGT00950000182941.a.a.b.e.a.b #27	ENSGT00940000159398 #28	ENSGT00940000156553.f #29	ENSGT00390000003012 #30	ENSGT00810000125524 #31	ENSGT00940000158871 #32	ENSGT00950000183028.a.b.a #33	ENSGT00390000005813 #34	ENSGT00940000165372 #35	ENSGT00950000183031.A.a.a #36	ENSGT00390000017974.nb #37
Amphiprion	ANCESTRAL SPECIES	1	ENSGT00390000010045.s #7	ENSGT00950000183182.a.a #8	ENSGT00940000156592 #9	ENSGT00940000153295.a.a #10	ENSGT00390000016054.b.i #11	ENSGT00390000015364.b #12	ENSGT00940000157291 #13	ENSGT00940000156762 #14	ENSGT00990000204035 #15	ENSGT00990000203803 #16	ENSGT00940000155107.a.a.a #17	ENSGT00940000159465 #18	ENSGT00940000158915 #19	ENSGT00390000001737 #20	ENSGT00940000166129 #21	ENSGT00390000004808.e #22	ENSGT00950000182986.b #23	ENSGT00940000154096.b.b.b.b.b #24	ENSGT00940000160627 #25	ENSGT00950000183163.a.a.ab #26	ENSGT00950000182941.a.a.b.e.a.b #27	ENSGT00940000159398 #28	ENSGT00940000156553.f #29	ENSGT00390000003012 #30	ENSGT00810000125524 #31	ENSGT00940000158871 #32	ENSGT00950000183028.a.b.a #33	ENSGT00390000005813 #34	ENSGT00940000165372 #35	ENSGT00950000183031.A.a.a #36	ENSGT00390000017974.nb #37
Orange clownfish	MODERN SPECIES	21	THEMIS2 (ENSAPEG00000006354)	rpa2 (ENSAPEG00000006317) #7	smpdl3b (ENSAPEG00000006295) #8	mecr (ENSAPEG00000006248) #9	LIN28A (ENSAPEG00000006197) #10	MANEAL (ENSAPEG00000006178) #11	yrdc (ENSAPEG00000006164) #12	mtf1 (ENSAPEG00000006125) #13	INPP5B (ENSAPEG00000006094) #14	ENSAPEG00000006078 #15	ZC3H12A (ENSAPEG00000006072) #17	GRIK3 (ENSAPEG00000006019) #18	csf3r (ENSAPEG00000005997) #19	mrps15 (ENSAPEG00000005965) #20	ENSAPEG00000005981 #21	OSCP1 (ENSAPEG00000005918) #22	STK40 (ENSAPEG00000005892) #23	eva1ba (ENSAPEG00000005773) #24	sh3d21 (ENSAPEG00000005738) #25	THRAP3 (ENSAPEG00000005696) #26	MAP7D1 (ENSAPEG00000005614) #27	MAP3K6 (ENSAPEG00000005570) #28	SNIP1 (ENSAPEG00000005542) #29	dnali1 (ENSAPEG00000005453) #30	gnl2 (ENSAPEG00000005375) #31	rspo1 (ENSAPEG00000005307) #32	FHL3 (ENSAPEG00000005272) #33	utp11 (ENSAPEG00000005214) #34	pou3f1 (ENSAPEG00000005174) #35	rragca (ENSAPEG00000005106) #36	MYCBP (ENSAPEG00000005073) #37
Clown anemonefish	MODERN SPECIES	1296							mtf1 (ENSAOCG00000015058) #13	INPP5B (ENSAOCG00000014998) #14	ENSAOCG00000014980	ENSAOCG00000001847 #16	ZC3H12A (ENSAOCG00000014937) #17	GRIK3 (ENSAOCG00000002707) #18	csf3r (ENSAOCG00000014880) #19	mrps15 (ENSAOCG00000014871) #20	ENSAOCG00000001009 #21	OSCP1 (ENSAOCG00000001002) #22	STK40 (ENSAOCG00000000999) #23	eva1ba (ENSAOCG00000014770) #24	sh3d21 (ENSAOCG00000000988) #25	THRAP3 (ENSAOCG00000014738) #26	MAP7D1 (ENSAOCG00000014698) #27	MAP3K6 (ENSAOCG00000014625) #28	SNIP1 (ENSAOCG00000014455) #29	dnali1 (ENSAOCG00000014444) #30	gnl2 (ENSAOCG00000014396) #31	rspo1 (ENSAOCG00000014341) #32	FHL3 (ENSAOCG00000014316) #33
Spiny chromis	MODERN SPECIES		THEMIS2 (ENSAPOG00000000959)	rpa2 (ENSAPOG00000024130) #7	smpdl3b (ENSAPOG00000024163) #8	mecr (ENSAPOG00000024202) #9	LIN28A (ENSAPOG00000024256) #10	MANEAL (ENSAPOG00000024286) #11	yrdc (ENSAPOG00000024293) #12	mtf1 (ENSAPOG00000024298) #13	INPP5B (ENSAPOG00000024312) #14	ENSAPOG00000024319 #15	ZC3H12A (ENSAPOG00000024328) #17	GRIK3 (ENSAPOG00000024373) #18	csf3r (ENSAPOG00000024384) #19	mrps15 (ENSAPOG00000024393) #20	ENSAPOG00000024397	OSCP1 (ENSAPOG00000024408) #22	STK40 (ENSAPOG00000024423) #23	eva1ba (ENSAPOG00000024432) #24	sh3d21 (ENSAPOG00000024442) #25	THRAP3 (ENSAPOG00000024453) #26	MAP7D1 (ENSAPOG00000024474) #27	MAP3K6 (ENSAPOG00000024486) #28	SNIP1 (ENSAPOG00000024490) #29	dnali1 (ENSAPOG00000024495) #30	gnl2 (ENSAPOG00000024507) #31	rspo1 (ENSAPOG00000024512) #32	FHL3 (ENSAPOG00000024520) #33	utp11 (ENSAPOG00000024525) #34	pou3f1 (ENSAPOG00000024530) #35	rragca (ENSAPOG00000024532) #36	MYCBP (ENSAPOG00000024534) #37
Bicolor damselfish	MODERN SPECIES	964												GRIK3 (ENSSPAG00000020311) #18	CSF3R (ENSSPAG00000020340) #19	mrps15 (ENSSPAG00000020369) #20	ENSSPAG00000020390	OSCP1 (ENSSPAG00000020406) #22	STK40 (ENSSPAG00000020429) #23