Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000155951 #22
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES	3	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00940000161006	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041	ENSGT00940000159219
Euteleostomi	ANCESTRAL SPECIES		ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00940000161006	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159531	ENSGT00940000154245.A ##32	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Sarcopterygii	ANCESTRAL SPECIES	2	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Tetrapoda	ANCESTRAL SPECIES	3	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Amniota	ANCESTRAL SPECIES	2	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Mammalia	ANCESTRAL SPECIES	1	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00390000018141	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Theria	ANCESTRAL SPECIES	6	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Primates	ANCESTRAL SPECIES	10	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Haplorrhini	ANCESTRAL SPECIES	23	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00910000147676	ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.a.a.a.a	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00940000153284.b	ENSGT00910000147676	ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.a.a.a.a	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155722.m.b.b #20	ENSGT00940000155951.b #22	ENSGT00390000016988.a.a.a.a.a.a.b #23	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Olive baboon	MODERN SPECIES	13	SPATA18 (ENSPANG00000009236) #7	SGCB (ENSPANG00000007510) #8	LRRC66 (ENSPANG00000010298) #9	ENSPANG00000043682 #10	ENSPANG00000000847 #11	ENSPANG00000043512 #12	CWH43 (ENSPANG00000022291) #13	OCIAD2 (ENSPANG00000012558) #14	OCIAD1 (ENSPANG00000000147) #15	ENSPANG00000045840 #16	FRYL (ENSPANG00000018310) #17	ZAR1 (ENSPANG00000018308) #18	SLC10A4 (ENSPANG00000018307) #19	ENSPANG00000030256 #20	SLAIN2 (ENSPANG00000012559) #21	TEC (ENSPANG00000016343) #22	ENSPANG00000036026 #23	TXK (ENSPANG00000021493) #24	NIPAL1 (ENSPANG00000010321) #25	CNGA1 (ENSPANG00000019103) #26	NFXL1 (ENSPANG00000025042) #27	ENSPANG00000045935 #28	CORIN (ENSPANG00000020531) #29	ATP10D (ENSPANG00000022429) #30	COMMD8 (ENSPANG00000007991) #31	GABRB1 (ENSPANG00000006774) #32	GABRA4 (ENSPANG00000014209) #33	ENSPANG00000043765 #34	GABRA2 (ENSPANG00000025578) #35	ENSPANG00000040416 #36	GABRG1 (ENSPANG00000016344) #37
Cercopithecinae_d	ANCESTRAL SPECIES	171							ENSGT00390000013354.d.a.a.a.b	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155722.m.b.b #20	ENSGT00940000155951.b #22	ENSGT00390000016988.a.a.a.a.a.a.b #23	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35
Sooty mangabey	MODERN SPECIES	241							ENSCATG00000031247	CWH43 (ENSCATG00000036392) #13	OCIAD2 (ENSCATG00000016252) #14	OCIAD1 (ENSCATG00000035190) #15	FRYL (ENSCATG00000035924) #17	ZAR1 (ENSCATG00000000461) #18	SLC10A4 (ENSCATG00000036979) #19	ENSCATG00000036193 #20	SLAIN2 (ENSCATG00000032868) #21	TEC (ENSCATG00000008966) #22	ENSCATG00000041789 #23	TXK (ENSCATG00000040104) #24	NIPAL1 (ENSCATG00000038035) #25	CNGA1 (ENSCATG00000007300) #26	NFXL1 (ENSCATG00000032998) #27	CORIN (ENSCATG00000033250) #29	ATP10D (ENSCATG00000035358) #30	COMMD8 (ENSCATG00000032205) #31	ENSCATG00000032344	GABRB1 (ENSCATG00000033572) #32	GABRA4 (ENSCATG00000031039) #33	COX7B2 (ENSCATG00000042585)	GABRA2 (ENSCATG00000031075) #35
Drill	MODERN SPECIES	369												FRYL (ENSMLEG00000039953) #17	SLC10A4 (ENSMLEG00000038642) #19	SLAIN2 (ENSMLEG00000033312) #21	ENSMLEG00000030158 #20	TEC (ENSMLEG00000037952) #22	ENSMLEG00000032342 #23	TXK (ENSMLEG00000037736) #24	NIPAL1 (ENSMLEG00000036121) #25	CNGA1 (ENSMLEG00000039861) #26	NFXL1 (ENSMLEG00000043961) #27
Macaca	ANCESTRAL SPECIES	25									ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Pig-tailed macaque	MODERN SPECIES	141															SLAIN2 (ENSMNEG00000037824) #21	TEC (ENSMNEG00000031110) #22	ENSMNEG00000024816 ##23	TXK (ENSMNEG00000039791) #24	NIPAL1 (ENSMNEG00000018934) #25	CNGA1 (ENSMNEG00000032099) #26	NFXL1 (ENSMNEG00000035889) #27	CORIN (ENSMNEG00000008872) #29	ATP10D (ENSMNEG00000034293) #30	COMMD8 (ENSMNEG00000041504) #31	ENSMNEG00000004109	GABRB1 (ENSMNEG00000029965) #32	GABRA4 (ENSMNEG00000030907) #33	COX7B2 (ENSMNEG00000023624)	GABRA2 (ENSMNEG00000029333) #35	GABRG1 (ENSMNEG00000045534) #37	GNPDA2 (ENSMNEG00000036979)
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00940000154298.a.b.f	ENSGT00940000157350	ENSGT00390000003791.g.b	ENSGT00530000063424.b	ENSGT01030000234574.B.c.a.c	ENSGT00940000160897	ENSGT00940000158223	ENSGT00940000155680.d	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00960000187632.b.a.a.a.a.a	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000161041	ENSGT00940000159219
Crab-eating macaque	MODERN SPECIES	15	ENSMFAG00000055735	CDS1 (ENSMFAG00000002059)	ENSMFAG00000059818	WDFY3 (ENSMFAG00000036405)	CWH43 (ENSMFAG00000000295) #13	OCIAD2 (ENSMFAG00000000259) #14	OCIAD1 (ENSMFAG00000043928) #15	FRYL (ENSMFAG00000034687) #17	ZAR1 (ENSMFAG00000051405) #18	SLC10A4 (ENSMFAG00000001804) #19	ENSMFAG00000063563	ENSMFAG00000052688	SLAIN2 (ENSMFAG00000042290) #21	ENSMFAG00000024698 #23	NIPAL1 (ENSMFAG00000003735) #25	TEC (ENSMFAG00000001846) #22	CNGA1 (ENSMFAG00000033706) #26	NFXL1 (ENSMFAG00000039913) #27	CORIN (ENSMFAG00000036209) #29	ATP10D (ENSMFAG00000032751) #30	COMMD8 (ENSMFAG00000041161) #31	ENSMFAG00000061433	ENSMFAG00000053972	ENSMFAG00000054648	ENSMFAG00000056237	GABRB1 (ENSMFAG00000031591) #32	GABRA4 (ENSMFAG00000032339) #33	ENSMFAG00000053148	ENSMFAG00000055312	ENSMFAG00000051347	ENSMFAG00000050524
Rhesus	MODERN SPECIES	15	NKX6-1 (ENSMMUG00000021161)	CDS1 (ENSMMUG00000021162)	ENSMMUG00000053390 ##10	WDFY3 (ENSMMUG00000021164)	CWH43 (ENSMMUG00000014714) #13	OCIAD2 (ENSMMUG00000014869) #14	ENSMMUG00000063785	OCIAD1 (ENSMMUG00000014868) #15	ENSMMUG00000056196	ENSMMUG00000057223	FRYL (ENSMMUG00000006705) #17	ZAR1 (ENSMMUG00000006704) #18	SLC10A4 (ENSMMUG00000006703) #19	ENSMMUG00000052381 #20	SLAIN2 (ENSMMUG00000056052) #21	TEC (ENSMMUG00000018628) #22	NIPAL1 (ENSMMUG00000018625) #25	CNGA1 (ENSMMUG00000005764) #26	NFXL1 (ENSMMUG00000021780) #27	ENSMMUG00000049414 ##10	CORIN (ENSMMUG00000021779) #29	ATP10D (ENSMMUG00000021778) #30	COMMD8 (ENSMMUG00000021777) #31	GABRB1 (ENSMMUG00000004314) #32	GABRA4 (ENSMMUG00000009526) #33	GABRA2 (ENSMMUG00000003614) #35	ENSMMUG00000064403	GABRG1 (ENSMMUG00000012820) #37	GUF1 (ENSMMUG00000009270)	GNPDA2 (ENSMMUG00000009273)	KCTD8 (ENSMMUG00000017912)
Vervet Monkey	MODERN SPECIES	19									CWH43 (ENSCSAG00000017220) #13	OCIAD2 (ENSCSAG00000017211) #14	OCIAD1 (ENSCSAG00000017208) #15	FRYL (ENSCSAG00000017204) #17	ZAR1 (ENSCSAG00000017185) #18	SLC10A4 (ENSCSAG00000017179) #19	SLAIN2 (ENSCSAG00000017177) #21	TEC (ENSCSAG00000017174) #22	TXK (ENSCSAG00000017171) #24	NIPAL1 (ENSCSAG00000017165) #25	CNGA1 (ENSCSAG00000017161) #26	NFXL1 (ENSCSAG00000017157) #27	CORIN (ENSCSAG00000017154) #29	ATP10D (ENSCSAG00000017150) #30	COMMD8 (ENSCSAG00000017147) #31	GABRB1 (ENSCSAG00000017141) #32	GABRA4 (ENSCSAG00000017136) #33	COX7B2 (ENSCSAG00000019687)	GABRA2 (ENSCSAG00000017135) #35	GABRG1 (ENSCSAG00000017132) #37	GNPDA2 (ENSCSAG00000017128)	GUF1 (ENSCSAG00000017118)	YIPF7 (ENSCSAG00000017113)
Rhinopithecus	ANCESTRAL SPECIES	653																ENSGT00940000155951.b #22	ENSGT00390000016988.a.a.a.a.a.b.d ##23	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27
Black snub-nosed monkey	MODERN SPECIES	2128																TEC (ENSRBIG00000043773) #22	ENSRBIG00000022731 ##23	TXK (ENSRBIG00000033667) #24	NIPAL1 (ENSRBIG00000012157) #25	CNGA1 (ENSRBIG00000033411) #26
Golden snub-nosed monkey	MODERN SPECIES	1540																TEC (ENSRROG00000034395) #22	ENSRROG00000041261 ##23	TXK (ENSRROG00000044259) #24	NIPAL1 (ENSRROG00000036258) #25	CNGA1 (ENSRROG00000040049) #26	NFXL1 (ENSRROG00000029087) #27
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Gibbon	MODERN SPECIES	12	IMP4 (ENSNLEG00000010574)	ENSNLEG00000010569	ENSNLEG00000010565	ENSNLEG00000026840	ENSNLEG00000030203	ENSNLEG00000010494	ENSNLEG00000010469	CWH43 (ENSNLEG00000017432) #13	ENSNLEG00000030034	OCIAD2 (ENSNLEG00000017430) #14	OCIAD1 (ENSNLEG00000017417) #15	FRYL (ENSNLEG00000017409) #17	ZAR1 (ENSNLEG00000017407) #18	SLC10A4 (ENSNLEG00000017405) #19	SLAIN2 (ENSNLEG00000017399) #21	TEC (ENSNLEG00000017384) #22	TXK (ENSNLEG00000017380) #24	NIPAL1 (ENSNLEG00000017377) #25	CNGA1 (ENSNLEG00000017375) #26	NFXL1 (ENSNLEG00000017372) #27	CORIN (ENSNLEG00000017357) #29	ENSNLEG00000029744	ATP10D (ENSNLEG00000017334) #30	COMMD8 (ENSNLEG00000017332) #31	ENSNLEG00000035223	GABRB1 (ENSNLEG00000017323) #32	GABRA4 (ENSNLEG00000017322) #33	COX7B2 (ENSNLEG00000030744)	GABRA2 (ENSNLEG00000017318) #35	GABRG1 (ENSNLEG00000017314) #37	GNPDA2 (ENSNLEG00000017308)
Hominidae	ANCESTRAL SPECIES	12	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Orangutan	MODERN SPECIES	17	CENPC (ENSPPYG00000014736)	STAP1 (ENSPPYG00000014735)	UBA6 (ENSPPYG00000014733)	GNRHR (ENSPPYG00000014732)	TMPRSS11D (ENSPPYG00000014731)	TMPRSS11A (ENSPPYG00000014730)	TMPRSS11F (ENSPPYG00000014728)	TMPRSS11B (ENSPPYG00000014727)	CWH43 (ENSPPYG00000014723) #13	OCIAD2 (ENSPPYG00000014722) #14	OCIAD1 (ENSPPYG00000014721) #15	FRYL (ENSPPYG00000014720) #17	ZAR1 (ENSPPYG00000014719) #18	SLC10A4 (ENSPPYG00000014718) #19	SLAIN2 (ENSPPYG00000014717) #21	TEC (ENSPPYG00000014716) #22	TXK (ENSPPYG00000014715) #24	NIPAL1 (ENSPPYG00000014714) #25	CNGA1 (ENSPPYG00000014712) #26	CORIN (ENSPPYG00000029738) #29	ATP10D (ENSPPYG00000014710) #30	COMMD8 (ENSPPYG00000014709) #31	GABRB1 (ENSPPYG00000014708) #32	GABRA4 (ENSPPYG00000014707) #33	COX7B2 (ENSPPYG00000014706)	GABRA2 (ENSPPYG00000014705) #35	GABRG1 (ENSPPYG00000014704) #37	GNPDA2 (ENSPPYG00000014703)	GUF1 (ENSPPYG00000014702)	YIPF7 (ENSPPYG00000038685)	KCTD8 (ENSPPYG00000014701)
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b.m #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b.m #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Pan	ANCESTRAL SPECIES	7	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b.m #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00910000144184.q.b.b.a.a	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00950000183015.D	ENSGT00940000153692.A
Chimpanzee	MODERN SPECIES	17	RASL11B (ENSPTRG00000016058)	ENSPTRG00000046219	ERVMER34-1 (ENSPTRG00000051750)	USP46 (ENSPTRG00000043855)	SPATA18 (ENSPTRG00000016054) #7	SGCB (ENSPTRG00000016053) #8	LRRC66 (ENSPTRG00000016052) #9	DCUN1D4 (ENSPTRG00000016051) #11	CWH43 (ENSPTRG00000016049) #13	OCIAD2 (ENSPTRG00000016048) #14	OCIAD1 (ENSPTRG00000016047) #15	FRYL (ENSPTRG00000016045) #17	ZAR1 (ENSPTRG00000016044) #18	SLC10A4 (ENSPTRG00000016043) #19	SLAIN2 (ENSPTRG00000016042) #21	TEC (ENSPTRG00000016041) #22	TXK (ENSPTRG00000016040) #24	NIPAL1 (ENSPTRG00000016038) #25	ENSPTRG00000039556	CNGA1 (ENSPTRG00000016036) #26	NFXL1 (ENSPTRG00000016035) #27	CORIN (ENSPTRG00000016034) #29	ENSPTRG00000052754	ATP10D (ENSPTRG00000016032) #30	COMMD8 (ENSPTRG00000016031) #31	GABRB1 (ENSPTRG00000016030) #32	GABRA4 (ENSPTRG00000016029) #33	COX7B2 (ENSPTRG00000016027)	GABRA2 (ENSPTRG00000016026) #35	GABRG1 (ENSPTRG00000016024) #37	ARHGAP24 (ENSPTRG00000016243)
Bonobo	MODERN SPECIES	17	RASL11B (ENSPPAG00000031269)	ENSPPAG00000025880	ERVMER34-1 (ENSPPAG00000019038)	USP46 (ENSPPAG00000011705)	SPATA18 (ENSPPAG00000026258) #7	SGCB (ENSPPAG00000036001) #8	LRRC66 (ENSPPAG00000032413) #9	DCUN1D4 (ENSPPAG00000042595) #11	CWH43 (ENSPPAG00000039872) #13	OCIAD2 (ENSPPAG00000037380) #14	OCIAD1 (ENSPPAG00000043460) #15	FRYL (ENSPPAG00000035404) #17	ENSPPAG00000038037 #18	SLC10A4 (ENSPPAG00000042294) #19	SLAIN2 (ENSPPAG00000043404) #21	TEC (ENSPPAG00000030176) #22	TXK (ENSPPAG00000037522) #24	NIPAL1 (ENSPPAG00000031664) #25	ENSPPAG00000043420	CNGA1 (ENSPPAG00000021167) #26	NFXL1 (ENSPPAG00000043425) #27	CORIN (ENSPPAG00000032757) #29	ENSPPAG00000030943	ATP10D (ENSPPAG00000012322) #30	COMMD8 (ENSPPAG00000033705) #31	GABRB1 (ENSPPAG00000041178) #32	GABRA4 (ENSPPAG00000041491) #33	COX7B2 (ENSPPAG00000017844)	GABRA2 (ENSPPAG00000028343) #35	GABRG1 (ENSPPAG00000027800) #37	ARHGAP24 (ENSPPAG00000036857)
Human	MODERN SPECIES	16	SCFD2 (ENSG00000184178)	RASL11B (ENSG00000128045)	ERVMER34-1 (ENSG00000226887)	USP46 (ENSG00000109189)	SPATA18 (ENSG00000163071) #7	SGCB (ENSG00000163069) #8	LRRC66 (ENSG00000188993) #9	DCUN1D4 (ENSG00000109184) #11	CWH43 (ENSG00000109182) #13	OCIAD2 (ENSG00000145247) #14	OCIAD1 (ENSG00000109180) #15	FRYL (ENSG00000075539) #17	ZAR1 (ENSG00000182223) #18	SLC10A4 (ENSG00000145248) #19	SLAIN2 (ENSG00000109171) #21	TEC (ENSG00000135605) #22	TXK (ENSG00000074966) #24	CNGA1 (ENSG00000198515) #26	NIPAL1 (ENSG00000163293) #25	NFXL1 (ENSG00000170448) #27	CORIN (ENSG00000145244) #29	ATP10D (ENSG00000145246) #30	COMMD8 (ENSG00000169019) #31	GABRB1 (ENSG00000163288) #32	GABRA4 (ENSG00000109158) #33	COX7B2 (ENSG00000170516)	GABRA2 (ENSG00000151834) #35	GABRG1 (ENSG00000163285) #37	GNPDA2 (ENSG00000163281)	GUF1 (ENSG00000151806)	YIPF7 (ENSG00000177752)
Gorilla	MODERN SPECIES	17	TMPRSS11B (ENSGGOG00000025912)	YTHDC1 (ENSGGOG00000021958)	TMPRSS11E (ENSGGOG00000022081)	ENSGGOG00000036668	UGT2B15 (ENSGGOG00000026833)	UGT2B10 (ENSGGOG00000001627)	UGT2A3 (ENSGGOG00000009595)	ENSGGOG00000043597	CWH43 (ENSGGOG00000014483) #13	OCIAD2 (ENSGGOG00000013778) #14	OCIAD1 (ENSGGOG00000006669) #15	FRYL (ENSGGOG00000007654) #17	ZAR1 (ENSGGOG00000007649) #18	SLC10A4 (ENSGGOG00000007646) #19	SLAIN2 (ENSGGOG00000012594) #21	TEC (ENSGGOG00000009028) #22	TXK (ENSGGOG00000009011) #24	NIPAL1 (ENSGGOG00000009006) #25	CNGA1 (ENSGGOG00000013840) #26	NFXL1 (ENSGGOG00000008489) #27	CORIN (ENSGGOG00000011143) #29	ATP10D (ENSGGOG00000008736) #30	COMMD8 (ENSGGOG00000024374) #31	ENSGGOG00000040640	GABRB1 (ENSGGOG00000034915) #32	GABRA4 (ENSGGOG00000026219) #33	COX7B2 (ENSGGOG00000026796)	GABRA2 (ENSGGOG00000006837) #35	GABRG1 (ENSGGOG00000016499) #37	GNPDA2 (ENSGGOG00000015835)	GUF1 (ENSGGOG00000001699)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00940000155951.b.n #22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00940000155951.b.n #22
Pan	ANCESTRAL SPECIES																	ENSGT00940000155951.b.n #22
Chimpanzee	MODERN SPECIES	533																ENSPTRG00000044594 #22	ENSPTRG00000044062 #24	ENSPTRG00000049978 #25	ENSPTRG00000052777	ENSPTRG00000046448 #26	ENSPTRG00000045255 #27
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b.c #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00950000182926.b.d.c.b.a.b.a	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00940000154632.q.a.a
Cebidae	ANCESTRAL SPECIES	4	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b.c #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00950000182926.b.d.c.b.a.b.a	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00940000154632.q.a.a
Marmoset	MODERN SPECIES	15	ENSCJAG00000072048	ERVMER34-1 (ENSCJAG00000062102)	USP46 (ENSCJAG00000018556)	SPATA18 (ENSCJAG00000018594) #7	SGCB (ENSCJAG00000018579) #8	LRRC66 (ENSCJAG00000018599) #9	DCUN1D4 (ENSCJAG00000018601) #11	CWH43 (ENSCJAG00000018615) #13	OCIAD2 (ENSCJAG00000018637) #14	OCIAD1 (ENSCJAG00000018644) #15	FRYL (ENSCJAG00000018669) #17	ENSCJAG00000085981 ##10	ZAR1 (ENSCJAG00000018797) #18	SLC10A4 (ENSCJAG00000018818) #19	SLAIN2 (ENSCJAG00000042883) #21	TEC (ENSCJAG00000018849) #22	ENSCJAG00000071494	TXK (ENSCJAG00000018872) #24	NIPAL1 (ENSCJAG00000060232) #25	CNGA1 (ENSCJAG00000018878) #26	NFXL1 (ENSCJAG00000018893) #27	CORIN (ENSCJAG00000018936) #29	ATP10D (ENSCJAG00000018950) #30	COMMD8 (ENSCJAG00000018967) #31	ENSCJAG00000018976	GABRA4 (ENSCJAG00000018992) #33	COX7B2 (ENSCJAG00000076426)	GABRA2 (ENSCJAG00000018998) #35	ENSCJAG00000019029	GNPDA2 (ENSCJAG00000019049)	GUF1 (ENSCJAG00000019056)
Cebidae_a	ANCESTRAL SPECIES	63	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b.g	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b.c #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00950000182926.b.d.c.b.a.b.a	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00940000154632.q.a.a	ENSGT00390000014316.c.a	ENSGT00550000074940
Bolivian squirrel monkey	MODERN SPECIES	99	SCFD2 (ENSSBOG00000033762)	RASL11B (ENSSBOG00000019612)	USP46 (ENSSBOG00000016128)	ENSSBOG00000013697	SPATA18 (ENSSBOG00000003084) #7	SGCB (ENSSBOG00000027981) #8	LRRC66 (ENSSBOG00000025555) #9	DCUN1D4 (ENSSBOG00000030384) #11	CWH43 (ENSSBOG00000032930) #13	OCIAD2 (ENSSBOG00000034198) #14	ENSSBOG00000021390 #15	FRYL (ENSSBOG00000028692) #17	ENSSBOG00000023936 #18	SLC10A4 (ENSSBOG00000024711) #19	SLAIN2 (ENSSBOG00000007441) #21	TEC (ENSSBOG00000021227) #22	TXK (ENSSBOG00000029128) #24	NIPAL1 (ENSSBOG00000035037) #25	CNGA1 (ENSSBOG00000031467) #26	NFXL1 (ENSSBOG00000003763) #27	CORIN (ENSSBOG00000016632) #29	ATP10D (ENSSBOG00000023690) #30	COMMD8 (ENSSBOG00000023425) #31	ENSSBOG00000020110	GABRB1 (ENSSBOG00000029924) #32	GABRA4 (ENSSBOG00000032427) #33	GABRA2 (ENSSBOG00000023995) #35	ENSSBOG00000011809	ENSSBOG00000014649	ENSSBOG00000023152	GNPDA2 (ENSSBOG00000027874)
Capuchin	MODERN SPECIES	124	ENSCCAG00000032234	ENSCCAG00000030356	SPATA18 (ENSCCAG00000020113) #7	SGCB (ENSCCAG00000012614) #8	LRRC66 (ENSCCAG00000037453) #9	DCUN1D4 (ENSCCAG00000016912) #11	CWH43 (ENSCCAG00000020925) #13	OCIAD2 (ENSCCAG00000031065) #14	OCIAD1 (ENSCCAG00000025450) #15	ENSCCAG00000037817	FRYL (ENSCCAG00000034554) #17	ENSCCAG00000034311 #18	SLC10A4 (ENSCCAG00000037459) #19	SLAIN2 (ENSCCAG00000008869) #21	ENSCCAG00000021799	TEC (ENSCCAG00000034761) #22	TXK (ENSCCAG00000017733) #24	NIPAL1 (ENSCCAG00000032859) #25	CNGA1 (ENSCCAG00000027342) #26	NFXL1 (ENSCCAG00000035844) #27	CORIN (ENSCCAG00000036055) #29	ATP10D (ENSCCAG00000032623) #30	COMMD8 (ENSCCAG00000037718) #31	ENSCCAG00000021015	GABRB1 (ENSCCAG00000031056) #32	GABRA4 (ENSCCAG00000031211) #33	ENSCCAG00000018365	GABRA2 (ENSCCAG00000024117) #35	GABRG1 (ENSCCAG00000020663) #37
Mas night monkey	MODERN SPECIES	469	ENSANAG00000036362	RASL11B (ENSANAG00000030414)	USP46 (ENSANAG00000037399)	SPATA18 (ENSANAG00000024358) #7	SGCB (ENSANAG00000037522) #8	LRRC66 (ENSANAG00000027871) #9	DCUN1D4 (ENSANAG00000006089) #11	CWH43 (ENSANAG00000036936) #13	OCIAD2 (ENSANAG00000033240) #14	OCIAD1 (ENSANAG00000037176) #15	ENSANAG00000027091	FRYL (ENSANAG00000030260) #17	ZAR1 (ENSANAG00000035179) #18	SLC10A4 (ENSANAG00000029030) #19	SLAIN2 (ENSANAG00000020742) #21	TEC (ENSANAG00000035862) #22	TXK (ENSANAG00000031213) #24	NIPAL1 (ENSANAG00000022393) #25	CNGA1 (ENSANAG00000026609) #26	NFXL1 (ENSANAG00000021407) #27	CORIN (ENSANAG00000024072) #29	ENSANAG00000020160	ATP10D (ENSANAG00000026040) #30	COMMD8 (ENSANAG00000019583) #31	ENSANAG00000025231	GABRB1 (ENSANAG00000026324) #32	GABRA4 (ENSANAG00000034063) #33	GABRA2 (ENSANAG00000032443) #35	GABRG1 (ENSANAG00000030543) #37	ENSANAG00000001347	GUF1 (ENSANAG00000010773)
Tarsier	MODERN SPECIES	5189																TEC (ENSTSYG00000037185) #22	TXK (ENSTSYG00000011407) #24	NIPAL1 (ENSTSYG00000010681) #25	CNGA1 (ENSTSYG00000026742) #26	NFXL1 (ENSTSYG00000012106) #27	CORIN (ENSTSYG00000014700) #29	ATP10D (ENSTSYG00000014699) #30
Strepsirrhini	ANCESTRAL SPECIES	18	ENSGT01080000257472	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b.e #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000166149	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Bushbaby	MODERN SPECIES	198	FIP1L1 (ENSOGAG00000009545)	ENSOGAG00000009543	ENSOGAG00000031587	RASL11B (ENSOGAG00000009539)	USP46 (ENSOGAG00000008762)	SPATA18 (ENSOGAG00000026234) #7	SGCB (ENSOGAG00000005669) #8	LRRC66 (ENSOGAG00000025206) #9	DCUN1D4 (ENSOGAG00000012891) #11	CWH43 (ENSOGAG00000001101) #13	OCIAD2 (ENSOGAG00000011039) #14	OCIAD1 (ENSOGAG00000009160) #15	FRYL (ENSOGAG00000004514) #17	SLC10A4 (ENSOGAG00000026350) #19	SLAIN2 (ENSOGAG00000004220) #21	TEC (ENSOGAG00000004217) #22	TXK (ENSOGAG00000004215) #24	NIPAL1 (ENSOGAG00000005452) #25	CNGA1 (ENSOGAG00000026326) #26	NFXL1 (ENSOGAG00000006702) #27	CORIN (ENSOGAG00000006697) #29	ATP10D (ENSOGAG00000024677) #30	COMMD8 (ENSOGAG00000013803) #31	ENSOGAG00000013800	ENSOGAG00000024581 ##32	GABRA4 (ENSOGAG00000013796) #33	GABRA2 (ENSOGAG00000005115) #35	GABRG1 (ENSOGAG00000012723) #37	GNPDA2 (ENSOGAG00000014580)	GUF1 (ENSOGAG00000014573)	YIPF7 (ENSOGAG00000014571)
Lemuriformes	ANCESTRAL SPECIES	39	ENSGT01080000257472	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b.e #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Lemuriformes_a	ANCESTRAL SPECIES	30	ENSGT01080000257472	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b.e #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Greater bamboo lemur	MODERN SPECIES	178	FIP1L1 (ENSPSMG00000020888)	SCFD2 (ENSPSMG00000021233)	RASL11B (ENSPSMG00000021259)	ENSPSMG00000021331	SPATA18 (ENSPSMG00000021358) #7	SGCB (ENSPSMG00000021382) #8	DCUN1D4 (ENSPSMG00000021445) #11	ENSPSMG00000021464	CWH43 (ENSPSMG00000021491) #13	OCIAD2 (ENSPSMG00000021515) #14	OCIAD1 (ENSPSMG00000021639) #15	FRYL (ENSPSMG00000021994) #17	ENSPSMG00000022122 #18	SLC10A4 (ENSPSMG00000022124) #19	SLAIN2 (ENSPSMG00000022153) #21	TEC (ENSPSMG00000022167) #22	TXK (ENSPSMG00000022176) #24	NIPAL1 (ENSPSMG00000022189) #25	CNGA1 (ENSPSMG00000022192) #26	NFXL1 (ENSPSMG00000022219) #27	CORIN (ENSPSMG00000022304) #29	ATP10D (ENSPSMG00000022336) #30	COMMD8 (ENSPSMG00000022342) #31	ENSPSMG00000022345	GABRB1 (ENSPSMG00000022375) #32	GABRA4 (ENSPSMG00000022395) #33	GABRA2 (ENSPSMG00000022455) #35	GABRG1 (ENSPSMG00000022509) #37	GNPDA2 (ENSPSMG00000022539)	GUF1 (ENSPSMG00000022567)	YIPF7 (ENSPSMG00000022571)
Coquerels sifaka	MODERN SPECIES	170	ENSPCOG00000016401	ENSPCOG00000027286	UBQLN2 (ENSPCOG00000005719)	ENSPCOG00000023256	RASL11B (ENSPCOG00000019628)	ENSPCOG00000007319	SPATA18 (ENSPCOG00000021115) #7	LRRC66 (ENSPCOG00000022176) #9	DCUN1D4 (ENSPCOG00000022124) #11	CWH43 (ENSPCOG00000023456) #13	OCIAD2 (ENSPCOG00000018962) #14	ENSPCOG00000023894 #15	FRYL (ENSPCOG00000023750) #17	SLC10A4 (ENSPCOG00000002435) #19	SLAIN2 (ENSPCOG00000018261) #21	TEC (ENSPCOG00000014627) #22	TXK (ENSPCOG00000027175) #24	NIPAL1 (ENSPCOG00000015001) #25	CNGA1 (ENSPCOG00000005717) #26	NFXL1 (ENSPCOG00000018897) #27	CORIN (ENSPCOG00000002135) #29	ATP10D (ENSPCOG00000011573) #30	COMMD8 (ENSPCOG00000025434) #31	GABRB1 (ENSPCOG00000028325) #32	GABRA4 (ENSPCOG00000022806) #33	GABRA2 (ENSPCOG00000020347) #35	GABRG1 (ENSPCOG00000025119) #37	GNPDA2 (ENSPCOG00000013890)	YIPF7 (ENSPCOG00000018220)
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	23	LNX1 (ENSMICG00000008163)	FIP1L1 (ENSMICG00000008149)	ENSMICG00000030479	ENSMICG00000048001	RASL11B (ENSMICG00000042188)	SPATA18 (ENSMICG00000012954) #7	SGCB (ENSMICG00000004494) #8	ENSMICG00000042369 #9	DCUN1D4 (ENSMICG00000012931) #11	CWH43 (ENSMICG00000004623) #13	OCIAD2 (ENSMICG00000006147) #14	OCIAD1 (ENSMICG00000006142) #15	FRYL (ENSMICG00000026961) #17	ENSMICG00000043813 #18	ENSMICG00000011602 #19	ENSMICG00000044443 #22	TXK (ENSMICG00000034723) #24	NIPAL1 (ENSMICG00000032802) #25	CNGA1 (ENSMICG00000036947) #26	NFXL1 (ENSMICG00000008116) #27	CORIN (ENSMICG00000010493) #29	ENSMICG00000010477 #30	ENSMICG00000010067	ENSMICG00000037942	SLC30A9 (ENSMICG00000016314)	BEND4 (ENSMICG00000014479)	SHISA3 (ENSMICG00000043105)	ATP8A1 (ENSMICG00000017860)	USP46 (ENSMICG00000028438)
Mouse lemur	MODERN SPECIES	130															SLAIN2 (ENSMICG00000011592) #21	ENSMICG00000030147 #22	PDGFRA (ENSMICG00000014660)	KIT (ENSMICG00000000829)	KDR (ENSMICG00000007310)	SRD5A3 (ENSMICG00000000317)	TMEM165 (ENSMICG00000000319)	CLOCK (ENSMICG00000000320)	PDCL2 (ENSMICG00000004180)	NMU (ENSMICG00000004184)	EXOC1L (ENSMICG00000043366)	EXOC1 (ENSMICG00000000681)	CEP135 (ENSMICG00000033892)	CRACD (ENSMICG00000034949)	ENSMICG00000033928	AASDH (ENSMICG00000008484)	ENSMICG00000044633
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Tree shrew	MODERN SPECIES	3073																ENSTBEG00000004722 #22	TXK (ENSTBEG00000003817) #24	NIPAL1 (ENSTBEG00000002952) #25
Glires	ANCESTRAL SPECIES	8	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Lagomorpha	ANCESTRAL SPECIES	157					ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000166149
Pika	MODERN SPECIES	10737																TEC (ENSOPRG00000011411) #22
Rabbit	MODERN SPECIES	11	ENSOCUG00000029122	SPATA18 (ENSOCUG00000007989) #7	ENSOCUG00000030792	SGCB (ENSOCUG00000005474) #8	LRRC66 (ENSOCUG00000005466) #9	DCUN1D4 (ENSOCUG00000012352) #11	ENSOCUG00000039350	CWH43 (ENSOCUG00000017815) #13	OCIAD2 (ENSOCUG00000007907) #14	OCIAD1 (ENSOCUG00000020964) #15	FRYL (ENSOCUG00000009628) #17	ENSOCUG00000034026 #18	SLC10A4 (ENSOCUG00000009624) #19	SLAIN2 (ENSOCUG00000009618) #21	TXK (ENSOCUG00000007648) #24	TEC (ENSOCUG00000007656) #22	NIPAL1 (ENSOCUG00000007643) #25	CNGA1 (ENSOCUG00000006384) #26	NFXL1 (ENSOCUG00000008876) #27	ENSOCUG00000033548	CORIN (ENSOCUG00000008858) #29	ATP10D (ENSOCUG00000008840) #30	COMMD8 (ENSOCUG00000008834) #31	ENSOCUG00000027343	ENSOCUG00000034893	ENSOCUG00000031140 ##32	GABRA4 (ENSOCUG00000025314) #33	GABRA2 (ENSOCUG00000002576) #35	GABRG1 (ENSOCUG00000014105) #37	ENSOCUG00000022761	ENSOCUG00000028076
Rodentia	ANCESTRAL SPECIES	13	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Rodentia_B	ANCESTRAL SPECIES	19	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Kangaroo rat	MODERN SPECIES	327	Chic2 (ENSDORG00000027994)	Lnx1 (ENSDORG00000005635)	ENSDORG00000005629	Scfd2 (ENSDORG00000005627)	Rasl11b (ENSDORG00000030008)	Usp46 (ENSDORG00000005800)	ENSDORG00000013679 #7	Sgcb (ENSDORG00000009646) #8	Dcun1d4 (ENSDORG00000009641) #11	Cwh43 (ENSDORG00000012169) #13	Ociad2 (ENSDORG00000016565) #14	ENSDORG00000014483 #15	Fryl (ENSDORG00000010559) #17	Slc10a4-ps (ENSDORG00000010557) #19	ENSDORG00000013286 #21	Tec (ENSDORG00000007674) #22	Txk (ENSDORG00000007673) #24	Nipal1 (ENSDORG00000028905) #25	ENSDORG00000004728 #26	Nfxl1 (ENSDORG00000004725) #27	Corin (ENSDORG00000016468) #29	Atp10d (ENSDORG00000016466) #30	Commd8 (ENSDORG00000023178) #31	Gabrb1 (ENSDORG00000010035) #32	Gabra4 (ENSDORG00000010032) #33	Gabra2 (ENSDORG00000011516) #35	Gabrg1 (ENSDORG00000007457) #37	Gnpda2 (ENSDORG00000005731)	Guf1 (ENSDORG00000005730)	Yipf7 (ENSDORG00000005728)	Kctd8 (ENSDORG00000003710)
Myomorpha	ANCESTRAL SPECIES	19	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00900000143492	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00860000136278	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Lesser Egyptian jerboa	MODERN SPECIES	68	Sgcb (ENSJJAG00000014651) #8	Dcun1d4 (ENSJJAG00000004315) #11	Cwh43 (ENSJJAG00000003882) #13	Ociad2 (ENSJJAG00000014970) #14	ENSJJAG00000022501 #15	ENSJJAG00000000670	ENSJJAG00000017344 #17	ENSJJAG00000000411 #17	ENSJJAG00000021698 #17	ENSJJAG00000021180 #18	Slc10a4 (ENSJJAG00000014813) #19	Gm10135 (ENSJJAG00000009677)	ENSJJAG00000005087 #21	ENSJJAG00000007686	ENSJJAG00000024258	Tec (ENSJJAG00000019635) #22	Txk (ENSJJAG00000023369) #24	Nipal1 (ENSJJAG00000005517) #25	Cnga1 (ENSJJAG00000023607) #26	Nfxl1 (ENSJJAG00000003216) #27	Corin (ENSJJAG00000023588) #29	Atp10d (ENSJJAG00000011940) #30	Commd8 (ENSJJAG00000010320) #31	ENSJJAG00000023881	Gabra4 (ENSJJAG00000014818) #33	Gabra2 (ENSJJAG00000021429) #35	Gabrg1 (ENSJJAG00000018513) #37	Gnpda2 (ENSJJAG00000017782)	Guf1 (ENSJJAG00000005872)	Yipf7 (ENSJJAG00000019356)	Kctd8 (ENSJJAG00000016518)
Muroidea	ANCESTRAL SPECIES	17	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00900000143492	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00860000136278	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00900000143492	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00860000136278	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00900000143492	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00860000136278	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00860000136278	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Northern American deer mouse	MODERN SPECIES	1	Scfd2 (ENSPEMG00000009457)	Rasl11b (ENSPEMG00000025524)	Usp46 (ENSPEMG00000009974)	Spata18 (ENSPEMG00000024192) #7	Sgcb (ENSPEMG00000024200) #8	Lrrc66 (ENSPEMG00000017432) #9	Dcun1d4 (ENSPEMG00000009638) #11	Cwh43 (ENSPEMG00000004208) #13	Ociad2 (ENSPEMG00000003543) #14	Ociad1 (ENSPEMG00000018262) #15	Fryl (ENSPEMG00000011628) #17	Zar1 (ENSPEMG00000021539) #18	Slc10a4-ps (ENSPEMG00000027365) #19	Gm10135 (ENSPEMG00000015600)	Slain2 (ENSPEMG00000025573) #21	Tec (ENSPEMG00000008562) #22	Txk (ENSPEMG00000022661) #24	Nipal1 (ENSPEMG00000028846) #25	Cnga1 (ENSPEMG00000022363) #26	Nfxl1 (ENSPEMG00000021617) #27	Corin (ENSPEMG00000022577) #29	ENSPEMG00000025175 #30	ENSPEMG00000003618 #30	ENSPEMG00000017813 #31	Gabrb1 (ENSPEMG00000022393) #32	Gabra4 (ENSPEMG00000006928) #33	Cox7b2 (ENSPEMG00000023469)	Gabra2 (ENSPEMG00000023011) #35	Gabrg1 (ENSPEMG00000013424) #37	ENSPEMG00000022092	Gnpda2 (ENSPEMG00000022280)
Prairie vole	MODERN SPECIES	349	Rasl11b (ENSMOCG00000022471)	Usp46 (ENSMOCG00000016898)	Spata18 (ENSMOCG00000019737) #7	Sgcb (ENSMOCG00000000430) #8	Lrrc66 (ENSMOCG00000017330) #9	Dcun1d4 (ENSMOCG00000012545) #11	Cwh43 (ENSMOCG00000009924) #13	ENSMOCG00000000283 #14	ENSMOCG00000000836 #15	ENSMOCG00000016810	Fryl (ENSMOCG00000012881) #17	Zar1 (ENSMOCG00000001183) #18	Slc10a4-ps (ENSMOCG00000019194) #19	Gm10135 (ENSMOCG00000012163)	Slain2 (ENSMOCG00000017102) #21	Tec (ENSMOCG00000014997) #22	Txk (ENSMOCG00000007298) #24	Nipal1 (ENSMOCG00000013121) #25	Cnga1 (ENSMOCG00000022062) #26	Nfxl1 (ENSMOCG00000013575) #27	Corin (ENSMOCG00000022718) #29	Atp10d (ENSMOCG00000010507) #30	Commd8 (ENSMOCG00000010168) #31	Gabrb1 (ENSMOCG00000014692) #32	Gabra4 (ENSMOCG00000004120) #33	Gabra2 (ENSMOCG00000018785) #35	ENSMOCG00000011454	Gnpda2 (ENSMOCG00000002396)	Guf1 (ENSMOCG00000011627)	Yipf7 (ENSMOCG00000011617)	Kctd8 (ENSMOCG00000005448)
Cricetinae	ANCESTRAL SPECIES	9	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00900000143492	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00860000136278	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Chinese hamster chok1gshd	MODERN SPECIES	44	ENSCGRG00001000842	ENSCGRG00001013783	Spata18 (ENSCGRG00001005385) #7	Sgcb (ENSCGRG00001022740) #8	Lrrc66 (ENSCGRG00001017360) #9	ENSCGRG00001011436	Dcun1d4 (ENSCGRG00001001891) #11	Cwh43 (ENSCGRG00001001137) #13	Ociad2 (ENSCGRG00001021466) #14	ENSCGRG00001016984 #15	Fryl (ENSCGRG00001000452) #17	Zar1 (ENSCGRG00001020317) #18	Slc10a4 (ENSCGRG00001013992) #19	Gm10135 (ENSCGRG00001010052)	Slain2 (ENSCGRG00001005700) #21	Tec (ENSCGRG00001016993) #22	Txk (ENSCGRG00001010710) #24	Nipal1 (ENSCGRG00001000663) #25	Cnga1 (ENSCGRG00001020845) #26	Nfxl1 (ENSCGRG00001013384) #27	Corin (ENSCGRG00001025041) #29	ENSCGRG00001014729 #30	ENSCGRG00001013940 #30	Commd8 (ENSCGRG00001012401) #31	ENSCGRG00001005202	ENSCGRG00001020674	Gabra4 (ENSCGRG00001019292) #33	Cox7b2 (ENSCGRG00001011917)	Gabra2 (ENSCGRG00001007162) #35	Gabrg1 (ENSCGRG00001018724) #37	Gnpda2 (ENSCGRG00001018102)
Murinae	ANCESTRAL SPECIES	12	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00860000136278	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Mus	ANCESTRAL SPECIES	14	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00860000136278	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Mus_A	ANCESTRAL SPECIES	6	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00860000136278	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Mus_B	ANCESTRAL SPECIES	4	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00860000136278	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Mouse	MODERN SPECIES	14	Fip1l1 (ENSMUSG00000029227)	Scfd2 (ENSMUSG00000062110)	Rasl11b (ENSMUSG00000049907)	Usp46 (ENSMUSG00000054814)	Spata18 (ENSMUSG00000029155) #7	Sgcb (ENSMUSG00000029156) #8	Lrrc66 (ENSMUSG00000067206) #9	Dcun1d4 (ENSMUSG00000051674) #11	Cwh43 (ENSMUSG00000029154) #13	Ociad2 (ENSMUSG00000029153) #14	Ociad1 (ENSMUSG00000029152) #15	Fryl (ENSMUSG00000070733) #17	Slc10a4 (ENSMUSG00000029219) #19	Gm10135 (ENSMUSG00000063656)	Slain2 (ENSMUSG00000036087) #21	Tec (ENSMUSG00000029217) #22	Txk (ENSMUSG00000054892) #24	Nipal1 (ENSMUSG00000067219) #25	Cnga1 (ENSMUSG00000067220) #26	Slc10a4-ps (ENSMUSG00000060204) #19	Zar1 (ENSMUSG00000063935) #18	Nfxl1 (ENSMUSG00000072889) #27	Corin (ENSMUSG00000005220) #29	Atp10d (ENSMUSG00000046808) #30	Commd8 (ENSMUSG00000029213) #31	Gabrb1 (ENSMUSG00000029212) #32	Gabra4 (ENSMUSG00000029211) #33	Cox7b2 (ENSMUSG00000049387)	Gabra2 (ENSMUSG00000000560) #35	Gabrg1 (ENSMUSG00000001260) #37	Gnpda2 (ENSMUSG00000029209)
Mus_C	ANCESTRAL SPECIES	4	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00860000136278	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
spretus	MODERN SPECIES	14	Rasl11b (MGP_SPRETEiJ_G0028297)	Usp46 (MGP_SPRETEiJ_G0028296)	Spata18 (MGP_SPRETEiJ_G0028295) #7	Sgcb (MGP_SPRETEiJ_G0028294) #8	MGP_SPRETEiJ_G0028293	Dcun1d4 (MGP_SPRETEiJ_G0028292) #11	Cwh43 (MGP_SPRETEiJ_G0028291) #13	Ociad2 (MGP_SPRETEiJ_G0028290) #14	Ociad1 (MGP_SPRETEiJ_G0028289) #15	Fryl (MGP_SPRETEiJ_G0028288) #17	MGP_SPRETEiJ_G0028287 #18	Slc10a4-ps (MGP_SPRETEiJ_G0028286) #19	MGP_SPRETEiJ_G0028285 #19	Gm10135 (MGP_SPRETEiJ_G0028284)	Slain2 (MGP_SPRETEiJ_G0028283) #21	Tec (MGP_SPRETEiJ_G0028282) #22	Txk (MGP_SPRETEiJ_G0028281) #24	Nipal1 (MGP_SPRETEiJ_G0028280) #25	Cnga1 (MGP_SPRETEiJ_G0028279) #26	Nfxl1 (MGP_SPRETEiJ_G0028278) #27	Corin (MGP_SPRETEiJ_G0028277) #29	MGP_SPRETEiJ_G0009414 #30	Commd8 (MGP_SPRETEiJ_G0028276) #31	Gabrb1 (MGP_SPRETEiJ_G0028275) #32	Gabra4 (MGP_SPRETEiJ_G0028274) #33	Gabra2 (MGP_SPRETEiJ_G0028272) #35	Gabrg1 (MGP_SPRETEiJ_G0028271) #37	Gnpda2 (MGP_SPRETEiJ_G0028270)	Guf1 (MGP_SPRETEiJ_G0028269)	Yipf7 (MGP_SPRETEiJ_G0028268)	Kctd8 (MGP_SPRETEiJ_G0028267)
Steppe mouse	MODERN SPECIES	274	ENSMSIG00000026077	Usp46 (ENSMSIG00000026049)	ENSMSIG00000026041	Spata18 (ENSMSIG00000025979) #7	Sgcb (ENSMSIG00000025957) #8	Lrrc66 (ENSMSIG00000025948) #9	Dcun1d4 (ENSMSIG00000025811) #11	Cwh43 (ENSMSIG00000025727) #13	ENSMSIG00000025682 #14	Ociad1 (ENSMSIG00000025586) #15	Fryl (ENSMSIG00000025235) #17	Zar1 (ENSMSIG00000025195) #18	ENSMSIG00000025179 #19	Gm10135 (ENSMSIG00000025164)	Slain2 (ENSMSIG00000025122) #21	Tec (ENSMSIG00000025047) #22	Txk (ENSMSIG00000024944) #24	Nipal1 (ENSMSIG00000024929) #25	ENSMSIG00000024923
Ryukyu mouse	MODERN SPECIES	14	Lnx1 (MGP_CAROLIEiJ_G0027305)	Fip1l1 (MGP_CAROLIEiJ_G0027304)	Scfd2 (MGP_CAROLIEiJ_G0027303)	Rasl11b (MGP_CAROLIEiJ_G0027302)	Usp46 (MGP_CAROLIEiJ_G0027301)	Spata18 (MGP_CAROLIEiJ_G0027300) #7	Sgcb (MGP_CAROLIEiJ_G0027299) #8	MGP_CAROLIEiJ_G0027298	Dcun1d4 (MGP_CAROLIEiJ_G0027297) #11	Cwh43 (MGP_CAROLIEiJ_G0027296) #13	Ociad2 (MGP_CAROLIEiJ_G0027295) #14	Ociad1 (MGP_CAROLIEiJ_G0027294) #15	Fryl (MGP_CAROLIEiJ_G0027293) #17	Gm10135 (MGP_CAROLIEiJ_G0027292)	Slain2 (MGP_CAROLIEiJ_G0027291) #21	Tec (MGP_CAROLIEiJ_G0027290) #22	Txk (MGP_CAROLIEiJ_G0027289) #24	Nipal1 (MGP_CAROLIEiJ_G0027288) #25	Cnga1 (MGP_CAROLIEiJ_G0027287) #26	MGP_CAROLIEiJ_G0027285 #19	Zar1 (MGP_CAROLIEiJ_G0027284) #18	Nfxl1 (MGP_CAROLIEiJ_G0027283) #27	Corin (MGP_CAROLIEiJ_G0027282) #29	MGP_CAROLIEiJ_G0008954 #30	Commd8 (MGP_CAROLIEiJ_G0027281) #31	Gabrb1 (MGP_CAROLIEiJ_G0027280) #32	Gabra4 (MGP_CAROLIEiJ_G0027279) #33	MGP_CAROLIEiJ_G0027277 #35	Gabrg1 (MGP_CAROLIEiJ_G0027276) #37	Gnpda2 (MGP_CAROLIEiJ_G0027275)	Guf1 (MGP_CAROLIEiJ_G0027274)
Shrew mouse	MODERN SPECIES	4	Rasl11b (MGP_PahariEiJ_G0017083)	Usp46 (MGP_PahariEiJ_G0017082)	Spata18 (MGP_PahariEiJ_G0017081) #7	Sgcb (MGP_PahariEiJ_G0017080) #8	MGP_PahariEiJ_G0017079	Dcun1d4 (MGP_PahariEiJ_G0017078) #11	Cwh43 (MGP_PahariEiJ_G0017077) #13	Ociad2 (MGP_PahariEiJ_G0017076) #14	Ociad1 (MGP_PahariEiJ_G0017075) #15	Fryl (MGP_PahariEiJ_G0017074) #17	Zar1 (MGP_PahariEiJ_G0017073) #18	Slc10a4-ps (MGP_PahariEiJ_G0017072) #19	Slc10a4 (MGP_PahariEiJ_G0017071) #19	Gm10135 (MGP_PahariEiJ_G0017070)	Slain2 (MGP_PahariEiJ_G0017069) #21	Tec (MGP_PahariEiJ_G0017068) #22	Txk (MGP_PahariEiJ_G0017067) #24	Nipal1 (MGP_PahariEiJ_G0017066) #25	Cnga1 (MGP_PahariEiJ_G0017065) #26	Nfxl1 (MGP_PahariEiJ_G0017064) #27	Corin (MGP_PahariEiJ_G0017063) #29	MGP_PahariEiJ_G0008413 #30	Commd8 (MGP_PahariEiJ_G0017062) #31	Gabrb1 (MGP_PahariEiJ_G0017061) #32	Gabra4 (MGP_PahariEiJ_G0017060) #33	Gabra2 (MGP_PahariEiJ_G0017058) #35	Gabrg1 (MGP_PahariEiJ_G0017057) #37	Gnpda2 (MGP_PahariEiJ_G0017056)	Guf1 (MGP_PahariEiJ_G0017055)	Yipf7 (MGP_PahariEiJ_G0017054)	Kctd8 (MGP_PahariEiJ_G0017053)
Rat	MODERN SPECIES	5	Rasl11b (ENSRNOG00000002097)	Usp46 (ENSRNOG00000002106)	LOC100363494 (ENSRNOG00000068757)	Spata18 (ENSRNOG00000002120) #7	Sgcb (ENSRNOG00000002135) #8	Lrrc66 (ENSRNOG00000026585) #9	Dcun1d4 (ENSRNOG00000002152) #11	Cwh43 (ENSRNOG00000002174) #13	Ociad2 (ENSRNOG00000002196) #14	Ociad1 (ENSRNOG00000002205) #15	Fryl (ENSRNOG00000002248) #17	Zar1 (ENSRNOG00000026150) #18	Slc10a4 (ENSRNOG00000026091) #19	Slain2 (ENSRNOG00000002271) #21	Gm10135 (ENSRNOG00000064628)	Tec (ENSRNOG00000002278) #22	Txk (ENSRNOG00000025925) #24	Nipal1 (ENSRNOG00000025882) #25	Cnga1 (ENSRNOG00000004778) #26	Nfxl1 (ENSRNOG00000058588) #27	Corin (ENSRNOG00000002302) #29	ENSRNOG00000069538	Atp10d (ENSRNOG00000002312) #30	Commd8 (ENSRNOG00000002320) #31	ENSRNOG00000066731	Gabrb1 (ENSRNOG00000002327) #32	Gabra4 (ENSRNOG00000002336) #33	Cox7b2 (ENSRNOG00000057953)	Gabra2 (ENSRNOG00000002349) #35	Gabrg1 (ENSRNOG00000002360) #37	ENSRNOG00000063124
Upper Galilee mountains blind mole rat	MODERN SPECIES	1002											Ociad1 (ENSNGAG00000008863) #15	Fryl (ENSNGAG00000009973) #17	Zar1 (ENSNGAG00000000707) #18	Slc10a4-ps (ENSNGAG00000018668) #19	ENSNGAG00000017188 #21	Tec (ENSNGAG00000019148) #22	Txk (ENSNGAG00000004261) #24	Nipal1 (ENSNGAG00000017155) #25	Cnga1 (ENSNGAG00000010093) #26	Nfxl1 (ENSNGAG00000002195) #27	Corin (ENSNGAG00000019079) #29	Atp10d (ENSNGAG00000020185) #30	Commd8 (ENSNGAG00000018861) #31	Gabrb1 (ENSNGAG00000000813) #32	Gabra4 (ENSNGAG00000009562) #33	Gabra2 (ENSNGAG00000018600) #35	Gabrg1 (ENSNGAG00000007385) #37	Gnpda2 (ENSNGAG00000011759)	Guf1 (ENSNGAG00000012997)	Yipf7 (ENSNGAG00000000193)	Kctd8 (ENSNGAG00000012220)
Rodentia_A	ANCESTRAL SPECIES	20	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532.j #7	ENSGT00390000013532.i #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Sciuridae	ANCESTRAL SPECIES	19	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532.j #7	ENSGT00390000013532.i #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Marmotini	ANCESTRAL SPECIES	26	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532.j #7	ENSGT00390000013532.i #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121.i #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Marmotini_b	ANCESTRAL SPECIES	48	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532.j #7	ENSGT00390000013532.i #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121.i #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Arctic ground squirrel	MODERN SPECIES	2	SCFD2 (ENSUPAG00010020412)	RASL11B (ENSUPAG00010020408)	USP46 (ENSUPAG00010020388)	ENSUPAG00010020376 #7	ENSUPAG00010020374 #7	SGCB (ENSUPAG00010020369) #8	LRRC66 (ENSUPAG00010020366) #9	DCUN1D4 (ENSUPAG00010020336) #11	CWH43 (ENSUPAG00010020291) #13	OCIAD2 (ENSUPAG00010020280) #14	OCIAD1 (ENSUPAG00010020236) #15	FRYL (ENSUPAG00010020086) #17	ENSUPAG00010020079 #18	ENSUPAG00010020074 #19	SLAIN2 (ENSUPAG00010020060) #21	TEC (ENSUPAG00010020011) #22	TXK (ENSUPAG00010019947) #24	NIPAL1 (ENSUPAG00010019941) #25	CNGA1 (ENSUPAG00010019928) #26	NFXL1 (ENSUPAG00010019911) #27	CORIN (ENSUPAG00010019864) #29	ATP10D (ENSUPAG00010019845) #30	COMMD8 (ENSUPAG00010019840) #31	GABRB1 (ENSUPAG00010019831) #32	GABRA4 (ENSUPAG00010019816) #33	COX7B2 (ENSUPAG00010019814)	GABRA2 (ENSUPAG00010019805) #35	GABRG1 (ENSUPAG00010019790) #37	GNPDA2 (ENSUPAG00010019785)	GUF1 (ENSUPAG00010019766)	YIPF7 (ENSUPAG00010019754)
Squirrel	MODERN SPECIES	82	RASL11B (ENSSTOG00000027610)	ENSSTOG00000033365	USP46 (ENSSTOG00000012149)	ENSSTOG00000004581 #7	ENSSTOG00000032283 #7	SGCB (ENSSTOG00000004569) #8	LRRC66 (ENSSTOG00000022844) #9	DCUN1D4 (ENSSTOG00000013799) #11	CWH43 (ENSSTOG00000014976) #13	OCIAD2 (ENSSTOG00000014971) #14	OCIAD1 (ENSSTOG00000014963) #15	FRYL (ENSSTOG00000007280) #17	ZAR1 (ENSSTOG00000031847) #18	SLC10A4 (ENSSTOG00000027820) #19	SLAIN2 (ENSSTOG00000007212) #21	TEC (ENSSTOG00000015809) #22	TXK (ENSSTOG00000015802) #24	NIPAL1 (ENSSTOG00000010605) #25	CNGA1 (ENSSTOG00000001278) #26	NFXL1 (ENSSTOG00000001258) #27	CORIN (ENSSTOG00000001240) #29	ENSSTOG00000001229 #30	ENSSTOG00000029527 #30	ENSSTOG00000031460 #31	GABRB1 (ENSSTOG00000008575) #32	GABRA4 (ENSSTOG00000001951) #33	GABRA2 (ENSSTOG00000004767) #35	GABRG1 (ENSSTOG00000008607) #37	GNPDA2 (ENSSTOG00000027514)	GUF1 (ENSSTOG00000003301)	YIPF7 (ENSSTOG00000003293)
Alpin marmot	MODERN SPECIES	9	ENSMMMG00000020094	ENSMMMG00000020086	USP46 (ENSMMMG00000020069)	ENSMMMG00000020060 #7	ENSMMMG00000020059 #7	SGCB (ENSMMMG00000020055) #8	LRRC66 (ENSMMMG00000020043) #9	DCUN1D4 (ENSMMMG00000020029) #11	CWH43 (ENSMMMG00000019997) #13	OCIAD2 (ENSMMMG00000019984) #14	OCIAD1 (ENSMMMG00000019868) #15	FRYL (ENSMMMG00000019781) #17	ENSMMMG00000019771 #18	ENSMMMG00000019763 #19	SLAIN2 (ENSMMMG00000019758) #21	TEC (ENSMMMG00000019700) #22	TXK (ENSMMMG00000019614) #24	NIPAL1 (ENSMMMG00000019609) #25	CNGA1 (ENSMMMG00000019576) #26	NFXL1 (ENSMMMG00000019525) #27	CORIN (ENSMMMG00000019455) #29	ENSMMMG00000019438 #30	ENSMMMG00000019428 #30	COMMD8 (ENSMMMG00000019422) #31	GABRB1 (ENSMMMG00000019411) #32	GABRA4 (ENSMMMG00000019399) #33	COX7B2 (ENSMMMG00000019389)	GABRA2 (ENSMMMG00000019373) #35	GABRG1 (ENSMMMG00000019360) #37	ENSMMMG00000019343	ENSMMMG00000019324
Eurasian red squirrel	MODERN SPECIES	18	SCFD2 (ENSSVLG00005022776)	RASL11B (ENSSVLG00005022855)	ENSSVLG00005022878	USP46 (ENSSVLG00005022950)	SPATA18 (ENSSVLG00005023119) #7	SGCB (ENSSVLG00005023300) #8	LRRC66 (ENSSVLG00005023343) #9	ENSSVLG00005023431 #11	CWH43 (ENSSVLG00005023619) #13	OCIAD2 (ENSSVLG00005023758) #14	OCIAD1 (ENSSVLG00005023852) #15	FRYL (ENSSVLG00005023963) #17	ZAR1 (ENSSVLG00005023995) #18	SLC10A4 (ENSSVLG00005024018) #19	SLAIN2 (ENSSVLG00005024044) #21	TEC (ENSSVLG00005024112) #22	TXK (ENSSVLG00005024163) #24	ENSSVLG00005024245 #25	CNGA1 (ENSSVLG00005024292) #26	NFXL1 (ENSSVLG00005024329) #27	CORIN (ENSSVLG00005024434) #29	ATP10D (ENSSVLG00005024815) #30	COMMD8 (ENSSVLG00005024853) #31	ENSSVLG00005024866	GABRB1 (ENSSVLG00005024897) #32	GABRA4 (ENSSVLG00005024936) #33	COX7B2 (ENSSVLG00005024964)	ENSSVLG00005024980	GABRA2 (ENSSVLG00005025024) #35	GABRG1 (ENSSVLG00005025083) #37	GNPDA2 (ENSSVLG00005025106)
Hystricomorpha	ANCESTRAL SPECIES	26	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532.j #7	ENSGT00390000013532.i #7	ENSGT00390000008110 #8	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Hystricomorpha_a	ANCESTRAL SPECIES	23	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532.j #7	ENSGT00390000013532.i #7	ENSGT00390000008110 #8	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Guinea pig	MODERN SPECIES	24	CHIC2 (ENSCPOG00000040036)	LNX1 (ENSCPOG00000010775)	ENSCPOG00000010770	SCFD2 (ENSCPOG00000039431)	RASL11B (ENSCPOG00000010760)	USP46 (ENSCPOG00000007660)	ENSCPOG00000011469 #7	SGCB (ENSCPOG00000030752) #8	DCUN1D4 (ENSCPOG00000008945) #11	CWH43 (ENSCPOG00000014177) #13	ENSCPOG00000019887 #14	OCIAD1 (ENSCPOG00000011863) #15	FRYL (ENSCPOG00000009647) #17	SLC10A4 (ENSCPOG00000009644) #19	SLAIN2 (ENSCPOG00000002806) #21	TEC (ENSCPOG00000008836) #22	TXK (ENSCPOG00000014571) #24	NIPAL1 (ENSCPOG00000036596) #25	CNGA1 (ENSCPOG00000024444) #26	NFXL1 (ENSCPOG00000014371) #27	CORIN (ENSCPOG00000006957) #29	ATP10D (ENSCPOG00000006948) #30	COMMD8 (ENSCPOG00000015113) #31	GABRB1 (ENSCPOG00000035961) #32	GABRA4 (ENSCPOG00000009388) #33	GABRA2 (ENSCPOG00000023215) #35	GABRG1 (ENSCPOG00000015531) #37	GNPDA2 (ENSCPOG00000005643)	GUF1 (ENSCPOG00000014267)	YIPF7 (ENSCPOG00000034301)	KCTD8 (ENSCPOG00000012356)
Hystricomorpha_b	ANCESTRAL SPECIES	37															ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Degu	MODERN SPECIES	276									ALB (ENSODEG00000001203)	AFP (ENSODEG00000001040)	ENSODEG00000001014	PIH1D2 (ENSODEG00000000981)	AFM (ENSODEG00000000940)	RASSF6 (ENSODEG00000000901)	ENSODEG00000000858 #21	TEC (ENSODEG00000000741) #22	TXK (ENSODEG00000000446) #24	NIPAL1 (ENSODEG00000002132) #25	CNGA1 (ENSODEG00000002002) #26	NFXL1 (ENSODEG00000001947) #27	CORIN (ENSODEG00000001650) #29	ATP10D (ENSODEG00000001271) #30	ENSODEG00000001205 #31	GABRB1 (ENSODEG00000001181) #32	GABRA4 (ENSODEG00000001120) #33	ENSODEG00000001093	ENSODEG00000000948	GABRA2 (ENSODEG00000000929) #35	GABRG1 (ENSODEG00000001375) #37
Long-tailed chinchilla	MODERN SPECIES	150															SLAIN2 (ENSCLAG00000004237) #21	TEC (ENSCLAG00000004499) #22	ENSCLAG00000005397	TXK (ENSCLAG00000006501) #24	NIPAL1 (ENSCLAG00000001296) #25	CNGA1 (ENSCLAG00000001415) #26	NFXL1 (ENSCLAG00000001495) #27	CORIN (ENSCLAG00000001635) #29	ATP10D (ENSCLAG00000002427) #30	COMMD8 (ENSCLAG00000002753) #31	GABRB1 (ENSCLAG00000002995) #32	GABRA4 (ENSCLAG00000003113) #33	GABRA2 (ENSCLAG00000005842) #35	GABRG1 (ENSCLAG00000006265) #37	GNPDA2 (ENSCLAG00000007210)	GUF1 (ENSCLAG00000007505)	YIPF7 (ENSCLAG00000008138)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES		ENSHGLG00000000290	KLHL31 (ENSHGLG00000002322)	ENSHGLG00000002382	LRRC1 (ENSHGLG00000032962)	MLIP (ENSHGLG00000001624)	TINAG (ENSHGLG00000001736)	FAM83B (ENSHGLG00000001791)	HCRTR2 (ENSHGLG00000001848)	ENSHGLG00000001917	ENSHGLG00000006692	ENSHGLG00000035494	ENSHGLG00000045923	ENSHGLG00000000126	ENSHGLG00000041870	ENSHGLG00000007453	ENSHGLG00000037553 #22	ENSHGLG00000047387	AZGP1 (ENSHGLG00000006938)	ZKSCAN1 (ENSHGLG00000010269)	ENSHGLG00000008084	ENSHGLG00000037014	ZNF3 (ENSHGLG00000044173)	ENSHGLG00000040209	COPS6 (ENSHGLG00000010175)	ENSHGLG00000042280	AP4M1 (ENSHGLG00000015128)	ENSHGLG00000017543	MBLAC1 (ENSHGLG00000015838)	ENSHGLG00000015201	ENSHGLG00000042504	LAMTOR4 (ENSHGLG00000018876)
Naked mole-rat female	MODERN SPECIES	1	ENSHGLG00000017366 #11	ENSHGLG00000031874	ENSHGLG00000021184	CWH43 (ENSHGLG00000017904) #13	ENSHGLG00000033110	ENSHGLG00000009214 #14	OCIAD1 (ENSHGLG00000005766) #15	ENSHGLG00000007948 #17	ENSHGLG00000045336 #17	ENSHGLG00000039998 #18	SLC10A4 (ENSHGLG00000013563) #19	ENSHGLG00000000325	SLAIN2 (ENSHGLG00000019447) #21	ENSHGLG00000043919	ENSHGLG00000042797	TEC (ENSHGLG00000015780) #22	ENSHGLG00000013808 #24	NIPAL1 (ENSHGLG00000044376) #25	CNGA1 (ENSHGLG00000018977) #26	NFXL1 (ENSHGLG00000014142) #27	CORIN (ENSHGLG00000006527) #29	ATP10D (ENSHGLG00000017944) #30	ENSHGLG00000042447	COMMD8 (ENSHGLG00000050189) #31	ENSHGLG00000048776	ENSHGLG00000018631	GABRA4 (ENSHGLG00000013999) #33	ENSHGLG00000034561	ENSHGLG00000043084	GABRA2 (ENSHGLG00000018532) #35	GABRG1 (ENSHGLG00000017802) #37
Naked mole-rat female	MODERN SPECIES	27	Gpat3 (ENSHGLG00000003421)	ENSHGLG00000037131	ENSHGLG00000036220	ENSHGLG00000036989	HELQ (ENSHGLG00000019137)	HPSE (ENSHGLG00000018930)	ENSHGLG00000016197	ENSHGLG00000049647	PLAC8 (ENSHGLG00000016121)	COPS4 (ENSHGLG00000044616)	ENSHGLG00000013973	SHCBP1 (ENSHGLG00000049778)	ENSHGLG00000001863	ORC6 (ENSHGLG00000040263)	MYLK3 (ENSHGLG00000002008)	ENSHGLG00000009681 #22	ENSHGLG00000045542	ENSHGLG00000002081	ENSHGLG00000041565	ENSHGLG00000049077	ENSHGLG00000002105	ENSHGLG00000039654	ENSHGLG00000050778	ENSHGLG00000002235	ENSHGLG00000002271	ENSHGLG00000002300	NETO2 (ENSHGLG00000002342)	ITFG1 (ENSHGLG00000002469)	PHKB (ENSHGLG00000002597)	ENSHGLG00000032846	ENSHGLG00000012004
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000173419
Eulipotyphla	ANCESTRAL SPECIES	1526																ENSGT00940000155951.b #22	ENSGT00940000160857 #24
Hedgehog	MODERN SPECIES	7544																TEC (ENSEEUG00000007089) #22	TXK (ENSEEUG00000006839) #24
Common shrew	MODERN SPECIES	2422																TEC (ENSSARG00000011658) #22
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Suina	ANCESTRAL SPECIES	33	ENSGT00390000011192	ENSGT00940000158643	ENSGT00730000111450.g.a	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Pig	MODERN SPECIES	16	SCFD2 (ENSSSCG00000008836)	RASL11B (ENSSSCG00000008835)	ENSSSCG00000021623	USP46 (ENSSSCG00000036284)	SPATA18 (ENSSSCG00000008834) #7	SGCB (ENSSSCG00000058015) #8	ENSSSCG00000008832 #9	DCUN1D4 (ENSSSCG00000008831) #11	CWH43 (ENSSSCG00000008830) #13	OCIAD2 (ENSSSCG00000008829) #14	OCIAD1 (ENSSSCG00000058121) #15	FRYL (ENSSSCG00000008826) #17	ZAR1 (ENSSSCG00000008824) #18	SLC10A4 (ENSSSCG00000008823) #19	SLAIN2 (ENSSSCG00000008821) #21	TEC (ENSSSCG00000008820) #22	TXK (ENSSSCG00000008819) #24	NIPAL1 (ENSSSCG00000037950) #25	CNGA1 (ENSSSCG00000038160) #26	NFXL1 (ENSSSCG00000008816) #27	CORIN (ENSSSCG00000008813) #29	ATP10D (ENSSSCG00000008812) #30	COMMD8 (ENSSSCG00000033373) #31	GABRB1 (ENSSSCG00000035621) #32	GABRA4 (ENSSSCG00000030515) #33	COX7B2 (ENSSSCG00000060404)	GABRA2 (ENSSSCG00000028922) #35	GABRG1 (ENSSSCG00000008809) #37	ENSSSCG00000055597	ENSSSCG00000058551	GNPDA2 (ENSSSCG00000008808)
Chacoan peccary	MODERN SPECIES	960	SCFD2 (ENSCWAG00000013750)	RASL11B (ENSCWAG00000013658)	ENSCWAG00000013604	USP46 (ENSCWAG00000013332)	SPATA18 (ENSCWAG00000012879) #7	SGCB (ENSCWAG00000012789) #8	LRRC66 (ENSCWAG00000012693) #9	DCUN1D4 (ENSCWAG00000012514) #11	CWH43 (ENSCWAG00000012257) #13	OCIAD2 (ENSCWAG00000012190) #14	OCIAD1 (ENSCWAG00000011906) #15	FRYL (ENSCWAG00000020707) #17	ZAR1 (ENSCWAG00000020692) #18	SLC10A4 (ENSCWAG00000020687) #19	SLAIN2 (ENSCWAG00000020658) #21	TEC (ENSCWAG00000020639) #22	TXK (ENSCWAG00000020613) #24	NIPAL1 (ENSCWAG00000020601) #25	CNGA1 (ENSCWAG00000020589) #26	ENSCWAG00000020564 #27	ENSCWAG00000020557 #27	CORIN (ENSCWAG00000019920) #29	ENSCWAG00000019843 #30	COMMD8 (ENSCWAG00000019821) #31	GABRB1 (ENSCWAG00000019796) #32	GABRA4 (ENSCWAG00000019750) #33	COX7B2 (ENSCWAG00000019738)	GABRA2 (ENSCWAG00000019606) #35	GABRG1 (ENSCWAG00000019563) #37	GNPDA2 (ENSCWAG00000019507)	GUF1 (ENSCWAG00000019480)
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Camelidae	ANCESTRAL SPECIES	22	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Arabian camel	MODERN SPECIES	11	ENSCDRG00005002298	SCFD2 (ENSCDRG00005002450)	RASL11B (ENSCDRG00005002505)	USP46 (ENSCDRG00005002550)	SPATA18 (ENSCDRG00005002631) #7	SGCB (ENSCDRG00005002679) #8	LRRC66 (ENSCDRG00005002703) #9	DCUN1D4 (ENSCDRG00005002732) #11	CWH43 (ENSCDRG00005002773) #13	OCIAD2 (ENSCDRG00005002794) #14	OCIAD1 (ENSCDRG00005002829) #15	FRYL (ENSCDRG00005002927) #17	ZAR1 (ENSCDRG00005002960) #18	SLC10A4 (ENSCDRG00005003027) #19	SLAIN2 (ENSCDRG00005003049) #21	TEC (ENSCDRG00005003076) #22	TXK (ENSCDRG00005003102) #24	NIPAL1 (ENSCDRG00005003127) #25	CNGA1 (ENSCDRG00005003141) #26	NFXL1 (ENSCDRG00005003159) #27	CORIN (ENSCDRG00005003215) #29	ATP10D (ENSCDRG00005003361) #30	COMMD8 (ENSCDRG00005003397) #31	GABRB1 (ENSCDRG00005003421) #32	GABRA4 (ENSCDRG00005003459) #33	COX7B2 (ENSCDRG00005003492)	GABRA2 (ENSCDRG00005003538) #35	GABRG1 (ENSCDRG00005003619) #37	GNPDA2 (ENSCDRG00005003665)	GUF1 (ENSCDRG00005003805)	YIPF7 (ENSCDRG00005004022)
Alpaca	MODERN SPECIES	1510															SLAIN2 (ENSVPAG00000008642) #21	TEC (ENSVPAG00000008639) #22	TXK (ENSVPAG00000008636) #24	CNGA1 (ENSVPAG00000008634) #26	NFXL1 (ENSVPAG00000008628) #27	CORIN (ENSVPAG00000008627) #29	ATP10D (ENSVPAG00000008619) #30	COMMD8 (ENSVPAG00000008617) #31	ENSVPAG00000008610
Artiodactyla_b	ANCESTRAL SPECIES	16	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00960000190735	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Cetacea	ANCESTRAL SPECIES	12	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00960000190735	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00960000190735	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Odontoceti_a	ANCESTRAL SPECIES	23	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00960000190735	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00960000190735	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00960000190735	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Beluga whale	MODERN SPECIES	77	ENSDLEG00000014974	ENSDLEG00000014987 #7	ENSDLEG00000015009 #7	SGCB (ENSDLEG00000015019) #8	LRRC66 (ENSDLEG00000015035) #9	DCUN1D4 (ENSDLEG00000007941) #11	OCIAD2 (ENSDLEG00000007977) #14	ENSDLEG00000007996	OCIAD1 (ENSDLEG00000008014) #15	FRYL (ENSDLEG00000008524) #17	ZAR1 (ENSDLEG00000010537) #18	ENSDLEG00000010664 #19	ENSDLEG00000010691 #18	ENSDLEG00000010735 #19	SLAIN2 (ENSDLEG00000010754) #21	TEC (ENSDLEG00000010828) #22	TXK (ENSDLEG00000011189) #24	NIPAL1 (ENSDLEG00000011296) #25	CNGA1 (ENSDLEG00000011319) #26	ENSDLEG00000011336 #27	ENSDLEG00000011368 #27	CORIN (ENSDLEG00000011445) #29	ATP10D (ENSDLEG00000012224) #30	COMMD8 (ENSDLEG00000012277) #31	GABRB1 (ENSDLEG00000012313) #32	GABRA4 (ENSDLEG00000012324) #33	COX7B2 (ENSDLEG00000012346)	GABRA2 (ENSDLEG00000012369) #35	GABRG1 (ENSDLEG00000012390) #37	MAD2L1 (ENSDLEG00000012412)	GNPDA2 (ENSDLEG00000012419)
Narwhal	MODERN SPECIES	307	SCFD2 (ENSMMNG00015013410)	RASL11B (ENSMMNG00015013438)	USP46 (ENSMMNG00015013470)	ENSMMNG00015013502	SPATA18 (ENSMMNG00015013524) #7	SGCB (ENSMMNG00015013564) #8	LRRC66 (ENSMMNG00015013581) #9	DCUN1D4 (ENSMMNG00015013609) #11	CWH43 (ENSMMNG00015013652) #13	OCIAD2 (ENSMMNG00015013680) #14	OCIAD1 (ENSMMNG00015013714) #15	FRYL (ENSMMNG00015013775) #17	ZAR1 (ENSMMNG00015013863) #18	SLC10A4 (ENSMMNG00015013870) #19	SLAIN2 (ENSMMNG00015013900) #21	TEC (ENSMMNG00015013940) #22	TXK (ENSMMNG00015013969) #24	NIPAL1 (ENSMMNG00015014041) #25	CNGA1 (ENSMMNG00015014058) #26	NFXL1 (ENSMMNG00015014090) #27	CORIN (ENSMMNG00015014182) #29	ATP10D (ENSMMNG00015014324) #30	COMMD8 (ENSMMNG00015014353) #31	GABRB1 (ENSMMNG00015005558) #32	GABRA4 (ENSMMNG00015005596) #33	COX7B2 (ENSMMNG00015005618)	GABRA2 (ENSMMNG00015005661) #35	GABRG1 (ENSMMNG00015005736) #37	MAD2L1 (ENSMMNG00015005750)	GNPDA2 (ENSMMNG00015005781)	GUF1 (ENSMMNG00015005837)
Vaquita	MODERN SPECIES	16	FIP1L1 (ENSPSNG00000005133)	SCFD2 (ENSPSNG00000005058)	RASL11B (ENSPSNG00000005019)	USP46 (ENSPSNG00000004926)	SPATA18 (ENSPSNG00000004807) #7	SGCB (ENSPSNG00000004745) #8	LRRC66 (ENSPSNG00000004722) #9	DCUN1D4 (ENSPSNG00000004664) #11	CWH43 (ENSPSNG00000004578) #13	OCIAD2 (ENSPSNG00000004549) #14	OCIAD1 (ENSPSNG00000004449) #15	FRYL (ENSPSNG00000004311) #17	ZAR1 (ENSPSNG00000004263) #18	SLC10A4 (ENSPSNG00000004242) #19	SLAIN2 (ENSPSNG00000004185) #21	TEC (ENSPSNG00000004114) #22	TXK (ENSPSNG00000004095) #24	NIPAL1 (ENSPSNG00000004075) #25	CNGA1 (ENSPSNG00000004009) #26	NFXL1 (ENSPSNG00000003970) #27	CORIN (ENSPSNG00000003743) #29	ATP10D (ENSPSNG00000003634) #30	COMMD8 (ENSPSNG00000003600) #31	GABRB1 (ENSPSNG00000003559) #32	GABRA4 (ENSPSNG00000003529) #33	COX7B2 (ENSPSNG00000003514)	GABRA2 (ENSPSNG00000003459) #35	GABRG1 (ENSPSNG00000003406) #37	MAD2L1 (ENSPSNG00000003391)	ENSPSNG00000003377	GNPDA2 (ENSPSNG00000003335)
Dolphin	MODERN SPECIES	853															SLAIN2 (ENSTTRG00000003281) #21	TEC (ENSTTRG00000003279) #22	TXK (ENSTTRG00000003278) #24	NIPAL1 (ENSTTRG00000003277) #25	CNGA1 (ENSTTRG00000003276) #26	NFXL1 (ENSTTRG00000003273) #27	CORIN (ENSTTRG00000003272) #29	ATP10D (ENSTTRG00000003271) #30
Sperm whale	MODERN SPECIES	18	SCFD2 (ENSPCTG00005005926)	RASL11B (ENSPCTG00005006028)	USP46 (ENSPCTG00005006091)	SPATA18 (ENSPCTG00005006266) #7	SGCB (ENSPCTG00005006339) #8	LRRC66 (ENSPCTG00005006377) #9	DCUN1D4 (ENSPCTG00005006440) #11	ENSPCTG00005006507	CWH43 (ENSPCTG00005006527) #13	OCIAD2 (ENSPCTG00005006614) #14	OCIAD1 (ENSPCTG00005006672) #15	FRYL (ENSPCTG00005006911) #17	ZAR1 (ENSPCTG00005007796) #18	SLC10A4 (ENSPCTG00005007820) #19	SLAIN2 (ENSPCTG00005007837) #21	TEC (ENSPCTG00005007901) #22	TXK (ENSPCTG00005007927) #24	NIPAL1 (ENSPCTG00005008004) #25	CNGA1 (ENSPCTG00005008032) #26	NFXL1 (ENSPCTG00005008066) #27	CORIN (ENSPCTG00005008164) #29	ENSPCTG00005000323	ATP10D (ENSPCTG00005000367) #30	COMMD8 (ENSPCTG00005000436) #31	GABRB1 (ENSPCTG00005000470) #32	GABRA4 (ENSPCTG00005000486) #33	ENSPCTG00005000506	COX7B2 (ENSPCTG00005000515)	GABRA2 (ENSPCTG00005000542) #35	GABRG1 (ENSPCTG00005000574) #37	GNPDA2 (ENSPCTG00005000612)
Blue whale	MODERN SPECIES	16	FIP1L1 (ENSBMSG00010002026)	SCFD2 (ENSBMSG00010002107)	RASL11B (ENSBMSG00010002125)	ENSBMSG00010002177	SPATA18 (ENSBMSG00010002257) #7	SGCB (ENSBMSG00010002296) #8	LRRC66 (ENSBMSG00010002339) #9	DCUN1D4 (ENSBMSG00010002390) #11	CWH43 (ENSBMSG00010002456) #13	OCIAD2 (ENSBMSG00010002503) #14	ENSBMSG00010002543 #15	FRYL (ENSBMSG00010002631) #17	ZAR1 (ENSBMSG00010002777) #18	SLC10A4 (ENSBMSG00010002788) #19	SLAIN2 (ENSBMSG00010002807) #21	TEC (ENSBMSG00010002868) #22	ENSBMSG00010002879	TXK (ENSBMSG00010002895) #24	NIPAL1 (ENSBMSG00010002941) #25	CNGA1 (ENSBMSG00010003040) #26	NFXL1 (ENSBMSG00010003069) #27	CORIN (ENSBMSG00010003199) #29	ATP10D (ENSBMSG00010003602) #30	COMMD8 (ENSBMSG00010003628) #31	GABRB1 (ENSBMSG00010003647) #32	GABRA4 (ENSBMSG00010003669) #33	ENSBMSG00010003693	COX7B2 (ENSBMSG00010003701)	GABRA2 (ENSBMSG00010003721) #35	GABRG1 (ENSBMSG00010003850) #37	ENSBMSG00010003887
Pecora	ANCESTRAL SPECIES	15	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00960000190735	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481.n.a.a.b.b	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121.a #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Yarkand deer	MODERN SPECIES	29	ENSCHYG00000012033	USP46 (ENSCHYG00000011853)	SPATA18 (ENSCHYG00000011770) #7	SGCB (ENSCHYG00000011679) #8	LRRC66 (ENSCHYG00000011643) #9	ENSCHYG00000011256 #11	CWH43 (ENSCHYG00000011014) #13	ENSCHYG00000010946	OCIAD2 (ENSCHYG00000010863) #14	ENSCHYG00000010837	ENSCHYG00000010611 #15	FRYL (ENSCHYG00000010372) #17	ZAR1 (ENSCHYG00000010019) #18	SLC10A4 (ENSCHYG00000009927) #19	SLAIN2 (ENSCHYG00000009823) #21	TEC (ENSCHYG00000009525) #22	ENSCHYG00000009480	ENSCHYG00000009456
Percora_a	ANCESTRAL SPECIES	18	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00960000190735	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481.n.a.a.b.b	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121.a #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Siberian musk deer	MODERN SPECIES	1266	ENSMMSG00000021486	SCFD2 (ENSMMSG00000021640)	RASL11B (ENSMMSG00000021670)	USP46 (ENSMMSG00000021696)	SPATA18 (ENSMMSG00000021782) #7	SGCB (ENSMMSG00000021920) #8	LRRC66 (ENSMMSG00000021932) #9	ENSMMSG00000021970 #11	CWH43 (ENSMMSG00000022043) #13	OCIAD2 (ENSMMSG00000022117) #14	ENSMMSG00000022145 #15	FRYL (ENSMMSG00000022278) #17	ZAR1 (ENSMMSG00000022742) #18	SLC10A4 (ENSMMSG00000022798) #19	SLAIN2 (ENSMMSG00000022812) #21	TEC (ENSMMSG00000022841) #22	TXK (ENSMMSG00000022866) #24	NIPAL1 (ENSMMSG00000022887) #25	CNGA1 (ENSMMSG00000022893) #26	NFXL1 (ENSMMSG00000022906) #27	CORIN (ENSMMSG00000022956) #29	ATP10D (ENSMMSG00000023395) #30	ENSMMSG00000023418 #31	GABRB1 (ENSMMSG00000023423) #32	GABRA4 (ENSMMSG00000023435) #33	COX7B2 (ENSMMSG00000023441)
Bovidae	ANCESTRAL SPECIES	18	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00960000190735	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481.n.a.a.b.b	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121.a #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Caprinae	ANCESTRAL SPECIES	13	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00910000147676	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121.a #31	ENSGT00940000166149	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Goat	MODERN SPECIES	25	RASL11B (ENSCHIG00000024365)	USP46 (ENSCHIG00000019211)	ENSCHIG00000025743	ENSCHIG00000015328	ENSCHIG00000008028	SPATA18 (ENSCHIG00000019427) #7	SGCB (ENSCHIG00000025818) #8	DCUN1D4 (ENSCHIG00000024006) #11	CWH43 (ENSCHIG00000011196) #13	OCIAD2 (ENSCHIG00000016581) #14	OCIAD1 (ENSCHIG00000024339) #15	FRYL (ENSCHIG00000012165) #17	ZAR1 (ENSCHIG00000018543) #18	SLC10A4 (ENSCHIG00000025771) #19	SLAIN2 (ENSCHIG00000013405) #21	TEC (ENSCHIG00000022693) #22	TXK (ENSCHIG00000013279) #24	NIPAL1 (ENSCHIG00000022683) #25	CNGA1 (ENSCHIG00000013825) #26	NFXL1 (ENSCHIG00000021507) #27	CORIN (ENSCHIG00000007759) #29	ATP10D (ENSCHIG00000017299) #30	ENSCHIG00000026952 #31	ENSCHIG00000014623	ENSCHIG00000019267 ##32	GABRA4 (ENSCHIG00000011129) #33	ENSCHIG00000024388	COX7B2 (ENSCHIG00000009371)	GABRA2 (ENSCHIG00000026398) #35	GABRG1 (ENSCHIG00000017957) #37	GNPDA2 (ENSCHIG00000022756)
Rambouillet Sheep	MODERN SPECIES	22	CHIC2 (ENSOARG00020014893)	LNX1 (ENSOARG00020014691)	SCFD2 (ENSOARG00020013824)	USP46 (ENSOARG00020013318)	ENSOARG00020013200	SPATA18 (ENSOARG00020013016) #7	SGCB (ENSOARG00020012938) #8	LRRC66 (ENSOARG00020012901) #9	DCUN1D4 (ENSOARG00020012554) #11	OCIAD2 (ENSOARG00020012338) #14	OCIAD1 (ENSOARG00020012036) #15	FRYL (ENSOARG00020010236) #17	ZAR1 (ENSOARG00020009774) #18	SLC10A4 (ENSOARG00020009737) #19	SLAIN2 (ENSOARG00020009674) #21	TEC (ENSOARG00020009559) #22	NIPAL1 (ENSOARG00020009494) #25	TXK (ENSOARG00020009330) #24	CNGA1 (ENSOARG00020009242) #26	NFXL1 (ENSOARG00020009047) #27	CORIN (ENSOARG00020008572) #29	ATP10D (ENSOARG00020008176) #30	ENSOARG00020008085 #31	ENSOARG00020008049	GABRB1 (ENSOARG00020007788) #32	GABRA4 (ENSOARG00020007713) #33	COX7B2 (ENSOARG00020007698)	GABRA2 (ENSOARG00020007600) #35	GABRG1 (ENSOARG00020007554) #37	GUF1 (ENSOARG00020007466)	KCTD8 (ENSOARG00020007446)
Bovinae	ANCESTRAL SPECIES	15	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00960000190735	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481.n.a.a.b.b	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121.a #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00940000162764.A.b	ENSGT00390000014316.c.a
American bison	MODERN SPECIES	3311								DCUN1D4 (ENSBBBG00000018193) #11	CWH43 (ENSBBBG00000018248) #13	OCIAD2 (ENSBBBG00000018293) #14	ENSBBBG00000018417 #15	FRYL (ENSBBBG00000004575) #17	ENSBBBG00000018563 #18	SLC10A4 (ENSBBBG00000008458) #19	SLAIN2 (ENSBBBG00000018594) #21	TEC (ENSBBBG00000018619) #22	TXK (ENSBBBG00000018635) #24	NIPAL1 (ENSBBBG00000018650) #25	CNGA1 (ENSBBBG00000018689) #26	NFXL1 (ENSBBBG00000018752) #27	ENSBBBG00000008354	ENSBBBG00000004703	CORIN (ENSBBBG00000018963) #29	ATP10D (ENSBBBG00000019001) #30	COMMD8 (ENSBBBG00000019012) #31	GABRB1 (ENSBBBG00000019051) #32	GABRA4 (ENSBBBG00000004881) #33	COX7B2 (ENSBBBG00000019069)	GABRA2 (ENSBBBG00000019140) #35	GABRG1 (ENSBBBG00000019154) #37	ENSBBBG00000019160
Bos	ANCESTRAL SPECIES	15	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00960000190735	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481.n.a.a.b.b.b.b.a.a.b.a.b	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121.a #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00940000162764.A.b	ENSGT00390000014316.c.a
Bos_b	ANCESTRAL SPECIES	14	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00940000154598.ac.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121.a #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00940000162764.A.b	ENSGT00390000014316.c.a	ENSGT00550000074940
Cow	DUPLICATION
Cow	MODERN SPECIES	25	SCFD2 (ENSBTAG00000020648)	RASL11B (ENSBTAG00000020647)	USP46 (ENSBTAG00000003443)	ENSBTAG00000051171	SPATA18 (ENSBTAG00000018106) #7	SGCB (ENSBTAG00000014601) #8	LRRC66 (ENSBTAG00000014599) #9	DCUN1D4 (ENSBTAG00000001600) #11	CWH43 (ENSBTAG00000021347) #13	OCIAD2 (ENSBTAG00000001839) #14	OCIAD1 (ENSBTAG00000010611) #15	FRYL (ENSBTAG00000000137) #17	ZAR1 (ENSBTAG00000004886) #18	SLC10A4 (ENSBTAG00000004888) #19	SLAIN2 (ENSBTAG00000021963) #21	ENSBTAG00000051457 #22	TEC (ENSBTAG00000005062) #22	TXK (ENSBTAG00000005055) #24	NIPAL1 (ENSBTAG00000009423) #25	CNGA1 (ENSBTAG00000002205) #26	NFXL1 (ENSBTAG00000002201) #27	ENSBTAG00000053278	CORIN (ENSBTAG00000002199) #29	ATP10D (ENSBTAG00000000473) #30	COMMD8 (ENSBTAG00000001348) #31	GABRB1 (ENSBTAG00000017837) #32	GABRA4 (ENSBTAG00000016645) #33	H4C14 (ENSBTAG00000039213)	COX7B2 (ENSBTAG00000050016)	GABRA2 (ENSBTAG00000011817) #35	GABRG1 (ENSBTAG00000012296) #37
Cow	MODERN SPECIES	25	RASL11B (ENSBTAG00000020647)	USP46 (ENSBTAG00000003443)	ENSBTAG00000051171	SPATA18 (ENSBTAG00000018106) #7	SGCB (ENSBTAG00000014601) #8	LRRC66 (ENSBTAG00000014599) #9	DCUN1D4 (ENSBTAG00000001600) #11	CWH43 (ENSBTAG00000021347) #13	OCIAD2 (ENSBTAG00000001839) #14	OCIAD1 (ENSBTAG00000010611) #15	FRYL (ENSBTAG00000000137) #17	ZAR1 (ENSBTAG00000004886) #18	SLC10A4 (ENSBTAG00000004888) #19	SLAIN2 (ENSBTAG00000021963) #21	ENSBTAG00000051457 #22	TEC (ENSBTAG00000005062) #22	TXK (ENSBTAG00000005055) #24	NIPAL1 (ENSBTAG00000009423) #25	CNGA1 (ENSBTAG00000002205) #26	NFXL1 (ENSBTAG00000002201) #27	ENSBTAG00000053278	CORIN (ENSBTAG00000002199) #29	ATP10D (ENSBTAG00000000473) #30	COMMD8 (ENSBTAG00000001348) #31	GABRB1 (ENSBTAG00000017837) #32	GABRA4 (ENSBTAG00000016645) #33	H4C14 (ENSBTAG00000039213)	COX7B2 (ENSBTAG00000050016)	GABRA2 (ENSBTAG00000011817) #35	GABRG1 (ENSBTAG00000012296) #37	ENSBTAG00000051838
Hybrid Bos Indicus	MODERN SPECIES	25	USP46 (ENSBIXG00005009949)	ENSBIXG00005000725	SPATA18 (ENSBIXG00005010019) #7	SGCB (ENSBIXG00005010046) #8	LRRC66 (ENSBIXG00005010057) #9	ENSBIXG00005010068	DCUN1D4 (ENSBIXG00005010120) #11	CWH43 (ENSBIXG00005010255) #13	OCIAD2 (ENSBIXG00005010308) #14	OCIAD1 (ENSBIXG00005010441) #15	ENSBIXG00005010496	FRYL (ENSBIXG00005000929) #17	ZAR1 (ENSBIXG00005010742) #18	SLC10A4 (ENSBIXG00005010767) #19	SLAIN2 (ENSBIXG00005010802) #21	TEC (ENSBIXG00005010856) #22	TXK (ENSBIXG00005010905) #24	NIPAL1 (ENSBIXG00005005914) #25	CNGA1 (ENSBIXG00005000558) #26	NFXL1 (ENSBIXG00005010994) #27	ENSBIXG00005000993	ENSBIXG00005011024	CORIN (ENSBIXG00005011067) #29	ENSBIXG00005011101	ENSBIXG00005011120	ATP10D (ENSBIXG00005001039) #30	COMMD8 (ENSBIXG00005011246) #31	GABRB1 (ENSBIXG00005001070) #32	GABRA4 (ENSBIXG00005011330) #33	ENSBIXG00005011349	COX7B2 (ENSBIXG00005011354)
Bos_a	ANCESTRAL SPECIES	21	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00960000190735	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481.n.a.a.b.b.b.b.a.a.b.a.b	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121.a #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00940000162764.A.b	ENSGT00390000014316.c.a
Domestic yak	MODERN SPECIES	25	USP46 (ENSBGRG00000025311)	ENSBGRG00000025365	SPATA18 (ENSBGRG00000000356) #7	SGCB (ENSBGRG00000000392) #8	LRRC66 (ENSBGRG00000000416) #9	ENSBGRG00000000436	ENSBGRG00000000459 #11	CWH43 (ENSBGRG00000000567) #13	OCIAD2 (ENSBGRG00000000633) #14	OCIAD1 (ENSBGRG00000000676) #15	ENSBGRG00000000739	FRYL (ENSBGRG00000000771) #17	ZAR1 (ENSBGRG00000000826) #18	SLC10A4 (ENSBGRG00000000935) #19	SLAIN2 (ENSBGRG00000000952) #21	TEC (ENSBGRG00000000984) #22	ENSBGRG00000001028	TXK (ENSBGRG00000001037) #24	NIPAL1 (ENSBGRG00000001082) #25	CNGA1 (ENSBGRG00000001119) #26	NFXL1 (ENSBGRG00000001143) #27	ENSBGRG00000001248	CORIN (ENSBGRG00000001280) #29	ATP10D (ENSBGRG00000001458) #30	ENSBGRG00000001531 #31	GABRB1 (ENSBGRG00000001566) #32	GABRA4 (ENSBGRG00000001620) #33	COX7B2 (ENSBGRG00000001660)	GABRA2 (ENSBGRG00000001680) #35	GABRG1 (ENSBGRG00000001712) #37	ENSBGRG00000001754
Wild yak	DUPLICATION
Wild yak	MODERN SPECIES	918								DCUN1D4 (ENSBMUG00000011888) #11	CWH43 (ENSBMUG00000011808) #13	OCIAD2 (ENSBMUG00000011788) #14	OCIAD1 (ENSBMUG00000011754) #15	FRYL (ENSBMUG00000011661) #17	ENSBMUG00000011565 #18	SLC10A4 (ENSBMUG00000011550) #19	SLAIN2 (ENSBMUG00000011532) #21	ENSBMUG00000011492 #22
Wild yak	MODERN SPECIES	1683																TEC (ENSBMUG00000006669) #22	TXK (ENSBMUG00000006771) #24	NIPAL1 (ENSBMUG00000006790) #25	CNGA1 (ENSBMUG00000006808) #26	ENSBMUG00000006878 #27
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121.d #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Equus	ANCESTRAL SPECIES	12	ENSGT01080000257472	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00940000154713.B	ENSGT00390000018121.d #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h.b	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Horse	MODERN SPECIES	22	FIP1L1 (ENSECAG00000019415)	SCFD2 (ENSECAG00000002235)	RASL11B (ENSECAG00000003789)	USP46 (ENSECAG00000009006)	SPATA18 (ENSECAG00000017782) #7	SGCB (ENSECAG00000020148) #8	LRRC66 (ENSECAG00000022299) #9	DCUN1D4 (ENSECAG00000023996) #11	CWH43 (ENSECAG00000024870) #13	OCIAD2 (ENSECAG00000024972) #14	OCIAD1 (ENSECAG00000024976) #15	FRYL (ENSECAG00000025119) #17	ZAR1 (ENSECAG00000021644) #18	SLC10A4 (ENSECAG00000021654) #19	SLAIN2 (ENSECAG00000023466) #21	TEC (ENSECAG00000024389) #22	TXK (ENSECAG00000057449) #24	NIPAL1 (ENSECAG00000019455) #25	CNGA1 (ENSECAG00000020953) #26	ENSECAG00000020915	NFXL1 (ENSECAG00000022401) #27	CORIN (ENSECAG00000005039) #29	ENSECAG00000037545	ATP10D (ENSECAG00000012518) #30	ENSECAG00000052249	COMMD8 (ENSECAG00000020380) #31	GABRB1 (ENSECAG00000022268) #32	GABRA4 (ENSECAG00000023424) #33	ENSECAG00000057080	ENSECAG00000046244	GABRA2 (ENSECAG00000000924) #35
Donkey	MODERN SPECIES	22	ENSEASG00005019566	SCFD2 (ENSEASG00005019936)	RASL11B (ENSEASG00005024651)	USP46 (ENSEASG00005019951)	SPATA18 (ENSEASG00005037001) #7	SGCB (ENSEASG00005004301) #8	LRRC66 (ENSEASG00005004297) #9	DCUN1D4 (ENSEASG00005014327) #11	CWH43 (ENSEASG00005014324) #13	OCIAD2 (ENSEASG00005014323) #14	OCIAD1 (ENSEASG00005014321) #15	FRYL (ENSEASG00005009561) #17	ZAR1 (ENSEASG00005026845) #18	SLC10A4 (ENSEASG00005009010) #19	SLAIN2 (ENSEASG00005009008) #21	TEC (ENSEASG00005008963) #22	TXK (ENSEASG00005008912) #24	NIPAL1 (ENSEASG00005029308) #25	CNGA1 (ENSEASG00005008890) #26	NFXL1 (ENSEASG00005008883) #27	ENSEASG00005038414	CORIN (ENSEASG00005008798) #29	ATP10D (ENSEASG00005008750) #30	ENSEASG00005008742	GABRA4 (ENSEASG00005008735) #33	ENSEASG00005033328	ENSEASG00005008729 #35	ENSEASG00005008726 #37	ENSEASG00005020568	IL7 (ENSEASG00005020566)	ZC2HC1A (ENSEASG00005020562)
Chiroptera	ANCESTRAL SPECIES	9	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121.d #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Microchiroptera	ANCESTRAL SPECIES	10	ENSGT01060000248700	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121.c #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Greater horseshoe bat	MODERN SPECIES	23	FZD8 (ENSRFEG00010005044)	ENSRFEG00010005049	ENSRFEG00010005054 #7	ENSRFEG00010005064 #7	SGCB (ENSRFEG00010005069) #8	LRRC66 (ENSRFEG00010005085) #9	DCUN1D4 (ENSRFEG00010005107) #11	CWH43 (ENSRFEG00010005162) #13	ENSRFEG00010000225	OCIAD2 (ENSRFEG00010000268) #14	OCIAD1 (ENSRFEG00010000361) #15	FRYL (ENSRFEG00010000583) #17	ZAR1 (ENSRFEG00010000867) #18	SLC10A4 (ENSRFEG00010000879) #19	SLAIN2 (ENSRFEG00010000907) #21	TEC (ENSRFEG00010000982) #22	TXK (ENSRFEG00010001040) #24	NIPAL1 (ENSRFEG00010001063) #25	CNGA1 (ENSRFEG00010001086) #26	NFXL1 (ENSRFEG00010001130) #27	CORIN (ENSRFEG00010001293) #29	ATP10D (ENSRFEG00010001499) #30	COMMD8 (ENSRFEG00010001543) #31	GABRB1 (ENSRFEG00010001568) #32	GABRA4 (ENSRFEG00010001585) #33	COX7B2 (ENSRFEG00010001622)	GABRA2 (ENSRFEG00010001647) #35	GABRG1 (ENSRFEG00010001696) #37	GNPDA2 (ENSRFEG00010001727)	GUF1 (ENSRFEG00010001765)	YIPF7 (ENSRFEG00010001813)
Microbat	MODERN SPECIES	1286										OCIAD2 (ENSMLUG00000000693) #14	OCIAD1 (ENSMLUG00000000688) #15	FRYL (ENSMLUG00000001543) #17	ENSMLUG00000025711 #18	SLC10A4 (ENSMLUG00000001540) #19	SLAIN2 (ENSMLUG00000001539) #21	TEC (ENSMLUG00000023677) #22	TXK (ENSMLUG00000007688) #24	NIPAL1 (ENSMLUG00000007679) #25	CNGA1 (ENSMLUG00000008401) #26	NFXL1 (ENSMLUG00000008367) #27	CORIN (ENSMLUG00000006709) #29	ATP10D (ENSMLUG00000006681) #30	ENSMLUG00000011376 #31	ENSMLUG00000006663
Megabat	MODERN SPECIES	2753																TEC (ENSPVAG00000016951) #22	TXK (ENSPVAG00000016948) #24
Carnivora	ANCESTRAL SPECIES	5	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT01050000247111
Felidae	ANCESTRAL SPECIES	4	ENSGT00390000011192	ENSGT00940000158643	ENSGT00870000136875	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT01050000247111	ENSGT00390000014316.c.a
Panthera	ANCESTRAL SPECIES	5	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00390000017515.o.a	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT01050000247111	ENSGT00390000014316.c.a
Tiger	MODERN SPECIES	71	SCFD2 (ENSPTIG00000015918)	RASL11B (ENSPTIG00000018380)	USP46 (ENSPTIG00000018978)	SPATA18 (ENSPTIG00000020999) #7	SGCB (ENSPTIG00000006714) #8	LRRC66 (ENSPTIG00000007410) #9	DCUN1D4 (ENSPTIG00000008793) #11	CWH43 (ENSPTIG00000010287) #13	OCIAD2 (ENSPTIG00000011641) #14	OCIAD1 (ENSPTIG00000013386) #15	ENSPTIG00000006593	ENSPTIG00000018205 #17	ENSPTIG00000011485 #17	SLC10A4 (ENSPTIG00000012275) #19	SLAIN2 (ENSPTIG00000013819) #21	TEC (ENSPTIG00000014620) #22	TXK (ENSPTIG00000015124) #24	NIPAL1 (ENSPTIG00000016398) #25	CNGA1 (ENSPTIG00000017279) #26	NFXL1 (ENSPTIG00000019105) #27	CORIN (ENSPTIG00000020309) #29	ATP10D (ENSPTIG00000011079) #30	COMMD8 (ENSPTIG00000014759) #31	ENSPTIG00000007162	GABRB1 (ENSPTIG00000015900) #32	GABRA4 (ENSPTIG00000017050) #33	COX7B2 (ENSPTIG00000007193)	GABRA2 (ENSPTIG00000018204) #35	GABRG1 (ENSPTIG00000001479) #37	GNPDA2 (ENSPTIG00000005856)	GUF1 (ENSPTIG00000009828)
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00390000017515.o.a	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00900000143503	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT01050000247111	ENSGT00390000014316.c.a
lion	MODERN SPECIES	4	ENSPLOG00000003341	USP46 (ENSPLOG00000003281)	SPATA18 (ENSPLOG00000003154) #7	SGCB (ENSPLOG00000003110) #8	LRRC66 (ENSPLOG00000003082) #9	DCUN1D4 (ENSPLOG00000003028) #11	CWH43 (ENSPLOG00000002953) #13	ENSPLOG00000002924	OCIAD2 (ENSPLOG00000002897) #14	OCIAD1 (ENSPLOG00000002821) #15	ENSPLOG00000002793	FRYL (ENSPLOG00000002649) #17	ZAR1 (ENSPLOG00000002527) #18	SLC10A4 (ENSPLOG00000002516) #19	SLAIN2 (ENSPLOG00000002485) #21	TEC (ENSPLOG00000002458) #22	TXK (ENSPLOG00000002434) #24	NIPAL1 (ENSPLOG00000002420) #25	CNGA1 (ENSPLOG00000002326) #26	NFXL1 (ENSPLOG00000002287) #27	CORIN (ENSPLOG00000002083) #29	ATP10D (ENSPLOG00000001877) #30	COMMD8 (ENSPLOG00000001862) #31	GABRB1 (ENSPLOG00000001840) #32	GABRA4 (ENSPLOG00000001830) #33	COX7B2 (ENSPLOG00000001825)	GABRA2 (ENSPLOG00000001768) #35	GABRG1 (ENSPLOG00000001738) #37	ENSPLOG00000001717	GNPDA2 (ENSPLOG00000001689)	GUF1 (ENSPLOG00000001646)
leopard	MODERN SPECIES	2	SPATA18 (ENSPPRG00000024100) #7	SGCB (ENSPPRG00000024271) #8	LRRC66 (ENSPPRG00000024319) #9	DCUN1D4 (ENSPPRG00000024436) #11	CWH43 (ENSPPRG00000024574) #13	ENSPPRG00000024611	OCIAD2 (ENSPPRG00000024648) #14	OCIAD1 (ENSPPRG00000024770) #15	ENSPPRG00000014463	ENSPPRG00000014456	FRYL (ENSPPRG00000024950) #17	ZAR1 (ENSPPRG00000025041) #18	ENSPPRG00000025049 #19	ENSPPRG00000021184 #19	SLAIN2 (ENSPPRG00000020572) #21	TEC (ENSPPRG00000019278) #22	TXK (ENSPPRG00000018223) #24	NIPAL1 (ENSPPRG00000016505) #25	CNGA1 (ENSPPRG00000015670) #26	NFXL1 (ENSPPRG00000014939) #27	CORIN (ENSPPRG00000014127) #29	ATP10D (ENSPPRG00000011749) #30	COMMD8 (ENSPPRG00000010563) #31	ENSPPRG00000022108	GABRB1 (ENSPPRG00000010093) #32	GABRA4 (ENSPPRG00000009969) #33	COX7B2 (ENSPPRG00000022077)	GABRA2 (ENSPPRG00000009651) #35	GABRG1 (ENSPPRG00000008774) #37	GNPDA2 (ENSPPRG00000007930)	GUF1 (ENSPPRG00000007366)
Cat	MODERN SPECIES	235	RASL11B (ENSFCAG00000045595)	ERVMER34-1 (ENSFCAG00000042785)	USP46 (ENSFCAG00000014294)	SPATA18 (ENSFCAG00000006689) #7	SGCB (ENSFCAG00000027835) #8	ENSFCAG00000042278 #9	DCUN1D4 (ENSFCAG00000023410) #11	CWH43 (ENSFCAG00000003695) #13	OCIAD2 (ENSFCAG00000027332) #14	OCIAD1 (ENSFCAG00000023294) #15	FRYL (ENSFCAG00000005489) #17	ZAR1 (ENSFCAG00000025777) #18	SLC10A4 (ENSFCAG00000005486) #19	SLAIN2 (ENSFCAG00000009221) #21	ENSFCAG00000048782	TEC (ENSFCAG00000014348) #22	TXK (ENSFCAG00000014347) #24	NIPAL1 (ENSFCAG00000045081) #25	CNGA1 (ENSFCAG00000009134) #26	NFXL1 (ENSFCAG00000031403) #27	CORIN (ENSFCAG00000006125) #29	ATP10D (ENSFCAG00000006122) #30	COMMD8 (ENSFCAG00000023811) #31	GABRB1 (ENSFCAG00000007122) #32	GABRA4 (ENSFCAG00000019171) #33	COX7B2 (ENSFCAG00000039360)	GABRA2 (ENSFCAG00000027986) #35	GABRG1 (ENSFCAG00000034116) #37	GNPDA2 (ENSFCAG00000028486)	GUF1 (ENSFCAG00000028580)	YIPF7 (ENSFCAG00000006282)
Caniformia	ANCESTRAL SPECIES	7	ENSGT01060000248700	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT01050000247111	ENSGT00390000014316.c.a
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b.o	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Ursidae	ANCESTRAL SPECIES	29	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b.o	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Ursus	ANCESTRAL SPECIES	51	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b.o	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00390000017515.o.a.m.b.a	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022.g #25	ENSGT00940000160022.h #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Polar bear	MODERN SPECIES	234	ENSUMAG00000002701	USP46 (ENSUMAG00000002673)	SPATA18 (ENSUMAG00000002644) #7	SGCB (ENSUMAG00000002628) #8	ENSUMAG00000002626 #9	DCUN1D4 (ENSUMAG00000002532) #11	CWH43 (ENSUMAG00000002461) #13	OCIAD2 (ENSUMAG00000002455) #14	OCIAD1 (ENSUMAG00000002446) #15	ENSUMAG00000002439	ENSUMAG00000002436	ENSUMAG00000002342 #17	ENSUMAG00000002333 #17	ENSUMAG00000002324 #19	SLAIN2 (ENSUMAG00000002315) #21	TEC (ENSUMAG00000002303) #22	TXK (ENSUMAG00000002289) #24	ENSUMAG00000002272 #25	ENSUMAG00000002266 #25	CNGA1 (ENSUMAG00000002261) #26	NFXL1 (ENSUMAG00000002247) #27	CORIN (ENSUMAG00000002040) #29	ATP10D (ENSUMAG00000001980) #30	COMMD8 (ENSUMAG00000001971) #31	ENSUMAG00000001916	GABRA4 (ENSUMAG00000001829) #33	ENSUMAG00000001818	COX7B2 (ENSUMAG00000001809)	GABRA2 (ENSUMAG00000001688) #35	ENSUMAG00000001669 #37	ENSUMAG00000001638 #37
American black bear	MODERN SPECIES	460																TEC (ENSUAMG00000009616) #22	TXK (ENSUAMG00000009555) #24
Giant Panda	MODERN SPECIES	2	ENSAMEG00000029850	SCFD2 (ENSAMEG00000008113)	RASL11B (ENSAMEG00000008116)	ENSAMEG00000008131	SPATA18 (ENSAMEG00000008174) #7	SGCB (ENSAMEG00000008182) #8	ENSAMEG00000026090 #9	DCUN1D4 (ENSAMEG00000008209) #11	CWH43 (ENSAMEG00000008221) #13	OCIAD2 (ENSAMEG00000008236) #14	OCIAD1 (ENSAMEG00000008239) #15	FRYL (ENSAMEG00000002926) #17	ENSAMEG00000025345 #18	SLC10A4 (ENSAMEG00000029016) #19	SLAIN2 (ENSAMEG00000003060) #21	TEC (ENSAMEG00000003081) #22	TXK (ENSAMEG00000003170) #24	NIPAL1 (ENSAMEG00000029604) #25	CNGA1 (ENSAMEG00000003224) #26	NFXL1 (ENSAMEG00000003238) #27	CORIN (ENSAMEG00000003272) #29	ATP10D (ENSAMEG00000003322) #30	COMMD8 (ENSAMEG00000003384) #31	ENSAMEG00000003395	ENSAMEG00000029631 ##32	GABRA4 (ENSAMEG00000003403) #33	COX7B2 (ENSAMEG00000018659)	GABRA2 (ENSAMEG00000003435) #35	GABRG1 (ENSAMEG00000016041) #37	ENSAMEG00000024774	GNPDA2 (ENSAMEG00000016070)
Mustelinae	ANCESTRAL SPECIES	63	ENSGT00940000158757	ENSGT01060000248700	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b.o	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
American mink	MODERN SPECIES	36	ENSNVIG00000013777	SCFD2 (ENSNVIG00000013759)	RASL11B (ENSNVIG00000013741)	ENSNVIG00000013705	SPATA18 (ENSNVIG00000013671) #7	SGCB (ENSNVIG00000013663) #8	ENSNVIG00000013642 #9	DCUN1D4 (ENSNVIG00000013585) #11	CWH43 (ENSNVIG00000013526) #13	OCAD2 (ENSNVIG00000013479) #14	ENSNVIG00000013401	FRYL (ENSNVIG00000013110) #17	ENSNVIG00000013101 #18	SLC10A4 (ENSNVIG00000013093) #19	SLAIN2 (ENSNVIG00000013057) #21	TEC (ENSNVIG00000013019) #22	TXK (ENSNVIG00000012997) #24	NIPAL1 (ENSNVIG00000012987) #25	ENSNVIG00000012974	NFXL1 (ENSNVIG00000012898) #27	CORIN (ENSNVIG00000012727) #29	ATP10D (ENSNVIG00000012669) #30	COMD8 (ENSNVIG00000012657) #31	GABRB1 (ENSNVIG00000012646) #32	GBRA4 (ENSNVIG00000012620) #33	COX7B2 (ENSNVIG00000012609)	GABRA2 (ENSNVIG00000012535) #35	GABRG1 (ENSNVIG00000012506) #37
Ferret	MODERN SPECIES	271	ENSMPUG00000005797	ENSMPUG00000005794	RASL11B (ENSMPUG00000005791)	ENSMPUG00000005778	ENSMPUG00000005776	USP46 (ENSMPUG00000005768)	SPATA18 (ENSMPUG00000005704) #7	SGCB (ENSMPUG00000005697) #8	LRRC66 (ENSMPUG00000005685) #9	DCUN1D4 (ENSMPUG00000005586) #11	CWH43 (ENSMPUG00000005574) #13	OCIAD2 (ENSMPUG00000005561) #14	FRYL (ENSMPUG00000005497) #17	SLC10A4 (ENSMPUG00000005489) #19	SLAIN2 (ENSMPUG00000005403) #21	TEC (ENSMPUG00000005388) #22	TXK (ENSMPUG00000005368) #24	NIPAL1 (ENSMPUG00000005324) #25	CNGA1 (ENSMPUG00000005258) #26	NFXL1 (ENSMPUG00000005201) #27	CORIN (ENSMPUG00000005053) #29	ATP10D (ENSMPUG00000005037) #30	COMMD8 (ENSMPUG00000005033) #31	GABRB1 (ENSMPUG00000005025) #32	GABRA4 (ENSMPUG00000005015) #33	COX7B2 (ENSMPUG00000018810)	ENSMPUG00000005007	GABRA2 (ENSMPUG00000005000) #35	GABRG1 (ENSMPUG00000004992) #37	GNPDA2 (ENSMPUG00000004986)	GUF1 (ENSMPUG00000004975)
Canidae	ANCESTRAL SPECIES	51	ENSGT01060000248700	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT01050000247111	ENSGT00390000014316.c.a	ENSGT00550000074940
Red fox	MODERN SPECIES	124	FIP1L1 (ENSVVUG00000024895)	SCFD2 (ENSVVUG00000024890)	RASL11B (ENSVVUG00000024884)	USP46 (ENSVVUG00000024880)	SPATA18 (ENSVVUG00000024870) #7	SGCB (ENSVVUG00000024865) #8	ENSVVUG00000024862 #9	DCUN1D4 (ENSVVUG00000024860) #11	CWH43 (ENSVVUG00000024853) #13	OCIAD2 (ENSVVUG00000024852) #14	OCIAD1 (ENSVVUG00000024850) #15	FRYL (ENSVVUG00000023775) #17	ENSVVUG00000023714 #19	ENSVVUG00000023706 #19	SLAIN2 (ENSVVUG00000023701) #21	TEC (ENSVVUG00000023694) #22	TXK (ENSVVUG00000023685) #24	NIPAL1 (ENSVVUG00000023672) #25	CNGA1 (ENSVVUG00000023669) #26	ENSVVUG00000023660 #27	ENSVVUG00000023657 #27	CORIN (ENSVVUG00000023644) #29	ATP10D (ENSVVUG00000023637) #30	COMMD8 (ENSVVUG00000023634) #31	ENSVVUG00000023173	GABRA4 (ENSVVUG00000023139) #33	COX7B2 (ENSVVUG00000023134)	GABRA2 (ENSVVUG00000023124) #35	GABRG1 (ENSVVUG00000023123) #37	ENSVVUG00000023104	GNPDA2 (ENSVVUG00000023103)
Canis_lupus	ANCESTRAL SPECIES	19	ENSGT01080000257472	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00390000012178.h	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT01050000247111	ENSGT00390000014316.c.a	ENSGT00550000074940
Dog	MODERN SPECIES	4	FIP1L1 (ENSCAFG00845011572)	SCFD2 (ENSCAFG00845011397)	RASL11B (ENSCAFG00845011251)	USP46 (ENSCAFG00845011008)	SPATA18 (ENSCAFG00845010886) #7	SGCB (ENSCAFG00845010845) #8	ENSCAFG00845010819 #9	DCUN1D4 (ENSCAFG00845010697) #11	CWH43 (ENSCAFG00845010559) #13	OCIAD2 (ENSCAFG00845010489) #14	OCIAD1 (ENSCAFG00845010354) #15	FRYL (ENSCAFG00845010043) #17	ENSCAFG00845009950 #18	SLC10A4 (ENSCAFG00845009926) #19	SLAIN2 (ENSCAFG00845009861) #21	TEC (ENSCAFG00845009779) #22	TXK (ENSCAFG00845009720) #24	NIPAL1 (ENSCAFG00845009684) #25	CNGA1 (ENSCAFG00845009629) #26	NFXL1 (ENSCAFG00845009403) #27	CORIN (ENSCAFG00845009036) #29	ATP10D (ENSCAFG00845008717) #30	COMMD8 (ENSCAFG00845008641) #31	ENSCAFG00845008573	GABRA4 (ENSCAFG00845008486) #33	COX7B2 (ENSCAFG00845008375)	GABRA2 (ENSCAFG00845015709) #35	GABRG1 (ENSCAFG00845015632) #37	ENSCAFG00845015556	GNPDA2 (ENSCAFG00845015497)	GUF1 (ENSCAFG00845015394)
Dingo	DUPLICATION
Dingo	MODERN SPECIES	2	ENSCAFG00020001745	SCFD2 (ENSCAFG00020001766)	RASL11B (ENSCAFG00020001800)	USP46 (ENSCAFG00020001811)	SPATA18 (ENSCAFG00020001878) #7	SGCB (ENSCAFG00020001898) #8	DCUN1D4 (ENSCAFG00020001922) #11	CWH43 (ENSCAFG00020001935) #13	OCIAD2 (ENSCAFG00020002015) #14	OCIAD1 (ENSCAFG00020002029) #15	FRYL (ENSCAFG00020002092) #17	ENSCAFG00020002367 #18	SLC10A4 (ENSCAFG00020002371) #19	ENSCAFG00020002381	SLAIN2 (ENSCAFG00020002388) #21	ENSCAFG00020002430 #22	TEC (ENSCAFG00020002435) #22	TXK (ENSCAFG00020002446) #24	NIPAL1 (ENSCAFG00020002496) #25	CNGA1 (ENSCAFG00020002520) #26	ENSCAFG00020002527 #27	ENSCAFG00020002539 #27	CORIN (ENSCAFG00020002573) #29	ATP10D (ENSCAFG00020002831) #30	COMMD8 (ENSCAFG00020002897) #31	ENSCAFG00020002902	GABRA4 (ENSCAFG00020002917) #33	COX7B2 (ENSCAFG00020002945)	GABRA2 (ENSCAFG00020002979) #35	GABRG1 (ENSCAFG00020003060) #37	ENSCAFG00020003081
Dingo	MODERN SPECIES	2	SCFD2 (ENSCAFG00020001766)	RASL11B (ENSCAFG00020001800)	USP46 (ENSCAFG00020001811)	SPATA18 (ENSCAFG00020001878) #7	SGCB (ENSCAFG00020001898) #8	DCUN1D4 (ENSCAFG00020001922) #11	CWH43 (ENSCAFG00020001935) #13	OCIAD2 (ENSCAFG00020002015) #14	OCIAD1 (ENSCAFG00020002029) #15	FRYL (ENSCAFG00020002092) #17	ENSCAFG00020002367 #18	SLC10A4 (ENSCAFG00020002371) #19	ENSCAFG00020002381	SLAIN2 (ENSCAFG00020002388) #21	ENSCAFG00020002430 #22	TEC (ENSCAFG00020002435) #22	TXK (ENSCAFG00020002446) #24	NIPAL1 (ENSCAFG00020002496) #25	CNGA1 (ENSCAFG00020002520) #26	ENSCAFG00020002527 #27	ENSCAFG00020002539 #27	CORIN (ENSCAFG00020002573) #29	ATP10D (ENSCAFG00020002831) #30	COMMD8 (ENSCAFG00020002897) #31	ENSCAFG00020002902	GABRA4 (ENSCAFG00020002917) #33	COX7B2 (ENSCAFG00020002945)	GABRA2 (ENSCAFG00020002979) #35	GABRG1 (ENSCAFG00020003060) #37	ENSCAFG00020003081	GNPDA2 (ENSCAFG00020003082)
Atlantogenata	ANCESTRAL SPECIES	25	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h
Xenarthra	ANCESTRAL SPECIES	129								ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000166149	ENSGT00940000154713.B	ENSGT00940000154245.A ##32	ENSGT00940000156722	ENSGT00940000159136	ENSGT00940000156685
Sloth	MODERN SPECIES	7038																TEC (ENSCHOG00000008374) #22	TXK (ENSCHOG00000008362) #24
Armadillo	MODERN SPECIES	2697							ENSDNOG00000040162 #11	CWH43 (ENSDNOG00000023671) #13	OCIAD2 (ENSDNOG00000045678) #14	OCIAD1 (ENSDNOG00000044168) #15	ENSDNOG00000048297	FRYL (ENSDNOG00000018958) #17	ZAR1 (ENSDNOG00000018955) #18	SLC10A4 (ENSDNOG00000031934) #19	SLAIN2 (ENSDNOG00000025559) #21	TEC (ENSDNOG00000019174) #22	TXK (ENSDNOG00000032218) #24	NIPAL1 (ENSDNOG00000030760) #25	CNGA1 (ENSDNOG00000009673) #26	NFXL1 (ENSDNOG00000037969) #27	CORIN (ENSDNOG00000004189) #29	ATP10D (ENSDNOG00000004165) #30	COMMD8 (ENSDNOG00000049641) #31	ENSDNOG00000036944	ENSDNOG00000041981	ENSDNOG00000031473 ##32	GABRA4 (ENSDNOG00000010762) #33	ENSDNOG00000045523
Afrotheria	ANCESTRAL SPECIES	78	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h
Tenrec	MODERN SPECIES	3127																ENSETEG00000008383 #22
Afrotheria_a	ANCESTRAL SPECIES	77	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00390000012178.h
Elephant	MODERN SPECIES	363	ENSLAFG00000029777	ENSLAFG00000008179	RASL11B (ENSLAFG00000008178)	USP46 (ENSLAFG00000012660)	SPATA18 (ENSLAFG00000000941) #7	SGCB (ENSLAFG00000008897) #8	LRRC66 (ENSLAFG00000008892) #9	DCUN1D4 (ENSLAFG00000000325) #11	CWH43 (ENSLAFG00000016893) #13	OCIAD2 (ENSLAFG00000002182) #14	OCIAD1 (ENSLAFG00000002180) #15	FRYL (ENSLAFG00000003254) #17	ENSLAFG00000003251 #18	SLC10A4 (ENSLAFG00000003247) #19	SLAIN2 (ENSLAFG00000002270) #21	TEC (ENSLAFG00000014056) #22	TXK (ENSLAFG00000014047) #24	NIPAL1 (ENSLAFG00000000555) #25	CNGA1 (ENSLAFG00000014036) #26	NFXL1 (ENSLAFG00000014027) #27	ENSLAFG00000031883 #29	ENSLAFG00000014013 #29	ATP10D (ENSLAFG00000014000) #30	COMMD8 (ENSLAFG00000009119) #31	GABRB1 (ENSLAFG00000030534) #32	GABRA4 (ENSLAFG00000022571) #33	COX7B2 (ENSLAFG00000009333)
Hyrax	MODERN SPECIES	6541																TEC (ENSPCAG00000002279) #22	ENSPCAG00000002189 #24
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00940000158757	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a.v #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00940000158757	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a.v #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Diprotodontia	ANCESTRAL SPECIES	10	ENSGT00940000158757	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a.v #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Diprotodontia_a	ANCESTRAL SPECIES	12	ENSGT00940000158757	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a.v #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00390000001153.f	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Common wonbat	MODERN SPECIES	1054	ENSVURG00010010337	ENSVURG00010010317	ENSVURG00010010296	RASL11B (ENSVURG00010010287)	USP46 (ENSVURG00010010270)	SPATA18 (ENSVURG00010010234) #7	SGCB (ENSVURG00010010202) #8	ENSVURG00010010193 #9	DCUN1D4 (ENSVURG00010010180) #11	OCIAD2 (ENSVURG00010010169) #14	OCIAD1 (ENSVURG00010010156) #15	FRYL (ENSVURG00010009965) #17	ZAR1 (ENSVURG00010009906) #18	SLC10A4 (ENSVURG00010009890) #19	SLAIN2 (ENSVURG00010009876) #21	TEC (ENSVURG00010009844) #22	ENSVURG00010009834 #24	NIPAL1 (ENSVURG00010009830) #25	CNGA1 (ENSVURG00010009825) #26	NFXL1 (ENSVURG00010009161) #27	ENSVURG00010009110 #29	ATP10D (ENSVURG00010009080) #30	COMMD8 (ENSVURG00010009076) #31	GABRB1 (ENSVURG00010009037) #32	ENSVURG00010008948	GABRA4 (ENSVURG00010008939) #33	GABRA2 (ENSVURG00010008795) #35	GABRG1 (ENSVURG00010008726) #37	ENSVURG00010008702	GNPDA2 (ENSVURG00010008669)	GUF1 (ENSVURG00010008574)
koala	MODERN SPECIES	2	ENSPCIG00000019814	ENSPCIG00000014778	RASL11B (ENSPCIG00000014777)	USP46 (ENSPCIG00000014769)	SPATA18 (ENSPCIG00000007327) #7	SGCB (ENSPCIG00000007333) #8	ENSPCIG00000007334 #9	DCUN1D4 (ENSPCIG00000007336) #11	ENSPCIG00000037400	OCIAD2 (ENSPCIG00000014376) #14	ENSPCIG00000014375 #15	FRYL (ENSPCIG00000033749) #17	ENSPCIG00000004401 #18	SLC10A4 (ENSPCIG00000004406) #19	SLAIN2 (ENSPCIG00000004414) #21	TEC (ENSPCIG00000004431) #22	TXK (ENSPCIG00000004439) #24	NIPAL1 (ENSPCIG00000004445) #25	CNGA1 (ENSPCIG00000004457) #26	NFXL1 (ENSPCIG00000004519) #27	ENSPCIG00000037372 #29	ATP10D (ENSPCIG00000013820) #30	COMMD8 (ENSPCIG00000037161) #31	ENSPCIG00000032215	ENSPCIG00000032330 ##32	ENSPCIG00000025296	GABRA4 (ENSPCIG00000025297) #33	GABRA2 (ENSPCIG00000025298) #35	ENSPCIG00000007457	GABRG1 (ENSPCIG00000025924) #37	GNPDA2 (ENSPCIG00000028572)
Wallaby	MODERN SPECIES	4152																ENSMEUG00000014213 #22
Tasmanian devil	MODERN SPECIES	5	LNX1 (ENSSHAG00000015394)	ENSSHAG00000015789	SCFD2 (ENSSHAG00000030711)	ENSSHAG00000030590	ENSSHAG00000027067	USP46 (ENSSHAG00000023109)	SPATA18 (ENSSHAG00000017688) #7	SGCB (ENSSHAG00000017739) #8	ENSSHAG00000017778 #9	DCUN1D4 (ENSSHAG00000029803) #11	ENSSHAG00000018132 #15	FRYL (ENSSHAG00000018266) #17	ZAR1 (ENSSHAG00000028887) #18	SLC10A4 (ENSSHAG00000024647) #19	SLAIN2 (ENSSHAG00000018527) #21	TEC (ENSSHAG00000018623) #22	TXK (ENSSHAG00000000134) #24	NIPAL1 (ENSSHAG00000031438) #25	CNGA1 (ENSSHAG00000001199) #26	NFXL1 (ENSSHAG00000002875) #27	CORIN (ENSSHAG00000000377) #29	ATP10D (ENSSHAG00000003179) #30	ENSSHAG00000005772 #31	GABRB1 (ENSSHAG00000006098) #32	GABRA4 (ENSSHAG00000010072) #33	GABRA2 (ENSSHAG00000013016) #35	GABRG1 (ENSSHAG00000003592) #37	ENSSHAG00000020500	GNPDA2 (ENSSHAG00000002028)	GUF1 (ENSSHAG00000003081)	YIPF7 (ENSSHAG00000004292)
Opossum	MODERN SPECIES	4	RASL11B (ENSMODG00000047546)	ENSMODG00000044858	USP46 (ENSMODG00000020647)	ENSMODG00000020645 #7	SGCB (ENSMODG00000020644) #8	ENSMODG00000027580 #9	ENSMODG00000045030	DCUN1D4 (ENSMODG00000020643) #11	ENSMODG00000046359 #14	OCIAD1 (ENSMODG00000020640) #15	ENSMODG00000039904	FRYL (ENSMODG00000020638) #17	ENSMODG00000020634 #18	SLC10A4 (ENSMODG00000020633) #19	SLAIN2 (ENSMODG00000020631) #21	TEC (ENSMODG00000020628) #22	TXK (ENSMODG00000020625) #24	ENSMODG00000043371 #25	ENSMODG00000039081 #25	CNGA1 (ENSMODG00000020622) #26	NFXL1 (ENSMODG00000020621) #27	CORIN (ENSMODG00000020619) #29	ENSMODG00000050772	ATP10D (ENSMODG00000020617) #30	COMMD8 (ENSMODG00000020616) #31	ENSMODG00000020614	ENSMODG00000028066	ENSMODG00000020608	ENSMODG00000048527 ##32	GABRA4 (ENSMODG00000020606) #33	GABRA2 (ENSMODG00000020598) #35
Platypus	MODERN SPECIES	3															SLAIN2 (ENSOANG00000004487) #21	TEC (ENSOANG00000005862) #22	NIPAL1 (ENSOANG00000005863) #25	CNGA1 (ENSOANG00000015247) #26	NFXL1 (ENSOANG00000012970) #27	CORIN (ENSOANG00000005179) #29	ATP10D (ENSOANG00000011823) #30	COMMD8 (ENSOANG00000047901) #31	GABRA4 (ENSOANG00000050220) #33	GABRA2 (ENSOANG00000036930) #35	GABRG1 (ENSOANG00000010535) #37	GNPDA2 (ENSOANG00000030572)	GUF1 (ENSOANG00000007142)	YIPF7 (ENSOANG00000045151)	GRXCR1 (ENSOANG00000010954)	ATP8A1 (ENSOANG00000001599)	SHISA3 (ENSOANG00000046765)
Sauria	ANCESTRAL SPECIES	6	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00960000189468	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.q.a #19	ENSGT00950000182808.a.a.b.b.q.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Archelosauria	ANCESTRAL SPECIES	4	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00960000189468	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000177950.a	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Archosauria	ANCESTRAL SPECIES	1	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00960000189468	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000177950.a	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Aves	ANCESTRAL SPECIES	3	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Neognathae	ANCESTRAL SPECIES	5	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Neognathae_b	ANCESTRAL SPECIES	4	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Neognathae_c	ANCESTRAL SPECIES	3	ENSGT00940000158757	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Golden eagle	MODERN SPECIES		RASL11B (ENSACCG00020004386)	USP46 (ENSACCG00020004360)	SPATA18 (ENSACCG00020004327) #7	SGCB (ENSACCG00020004304) #8	LRRC66 (ENSACCG00020004290) #9	DCUN1D4 (ENSACCG00020004264) #11	CWH43 (ENSACCG00020004233) #13	ENSACCG00020004209	ENSACCG00020004204	ENSACCG00020004197	OCIAD1 (ENSACCG00020004187) #15	FRYL (ENSACCG00020002372) #17	ZAR1 (ENSACCG00020000279) #18	SLC10A4 (ENSACCG00020000278) #19	SLAIN2 (ENSACCG00020000277) #21	TEC (ENSACCG00020000276) #22	ENSACCG00020000274 #24	ENSACCG00020000273 #24	ENSACCG00020000272 #25	ENSACCG00020000271 #25	CNGA1 (ENSACCG00020000270) #26	NFXL1 (ENSACCG00020000269) #27	CORIN (ENSACCG00020000268) #29	ATP10D (ENSACCG00020000267) #30	COMMD8 (ENSACCG00020000266) #31	ENSACCG00020000265	GABRA4 (ENSACCG00020000264) #33	GABRA2 (ENSACCG00020000263) #35	GABRG1 (ENSACCG00020000262) #37	GNPDA2 (ENSACCG00020000261)	GUF1 (ENSACCG00020000260)
Kakapo	MODERN SPECIES	24	LNX1 (ENSSHBG00005020124)	ENSSHBG00005020119	SCFD2 (ENSSHBG00005020115)	RASL11B (ENSSHBG00005020112)	USP46 (ENSSHBG00005020110)	SPATA18 (ENSSHBG00005020104) #7	SGCB (ENSSHBG00005020099) #8	ENSSHBG00005020096 #9	DCUN1D4 (ENSSHBG00005020092) #11	CWH43 (ENSSHBG00005020070) #13	OCIAD1 (ENSSHBG00005020061) #15	FRYL (ENSSHBG00005014141) #17	ZAR1 (ENSSHBG00005012872) #18	SLC10A4 (ENSSHBG00005012842) #19	SLAIN2 (ENSSHBG00005012826) #21	TEC (ENSSHBG00005012809) #22	ENSSHBG00005012789 #24	ENSSHBG00005012756 #24	ENSSHBG00005012732 #25	ENSSHBG00005012723 #25	CNGA1 (ENSSHBG00005012699) #26	NFXL1 (ENSSHBG00005012673) #27	CORIN (ENSSHBG00005011756) #29	ATP10D (ENSSHBG00005011492) #30	COMMD8 (ENSSHBG00005011458) #31	ENSSHBG00005011423	GABRA4 (ENSSHBG00005011404) #33	ENSSHBG00005011385 #33	GABRA2 (ENSSHBG00005011366) #35	GABRG1 (ENSSHBG00005011331) #37	GNPDA2 (ENSSHBG00005011312)
Passeriformes	ANCESTRAL SPECIES	4	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Passeriformes_d	ANCESTRAL SPECIES	4	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Passeriformes_g	ANCESTRAL SPECIES	5	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Passeroidea	ANCESTRAL SPECIES	4	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Zebra finch	MODERN SPECIES	25	LNX1 (ENSTGUG00000007807)	ENSTGUG00000007834	SCFD2 (ENSTGUG00000007847)	RASL11B (ENSTGUG00000027603)	USP46 (ENSTGUG00000023387)	ENSTGUG00000022606 #7	SGCB (ENSTGUG00000007902) #8	ENSTGUG00000007920 #9	DCUN1D4 (ENSTGUG00000025443) #11	CWH43 (ENSTGUG00000007956) #13	OCIAD1 (ENSTGUG00000007973) #15	FRYL (ENSTGUG00000007989) #17	ZAR1 (ENSTGUG00000027253) #18	SLC10A4 (ENSTGUG00000008069) #19	SLAIN2 (ENSTGUG00000008079) #21	TEC (ENSTGUG00000008092) #22	TXK (ENSTGUG00000013782) #24	NIPAL1 (ENSTGUG00000021171) #25	CNGA1 (ENSTGUG00000008154) #26	NFXL1 (ENSTGUG00000008171) #27	CORIN (ENSTGUG00000008187) #29	ATP10D (ENSTGUG00000008235) #30	COMMD8 (ENSTGUG00000008291) #31	ENSTGUG00000008295	GABRA4 (ENSTGUG00000008347) #33	GABRA2 (ENSTGUG00000028953) #35	GABRG1 (ENSTGUG00000027953) #37	GNPDA2 (ENSTGUG00000008441)	GUF1 (ENSTGUG00000008453)	YIPF7 (ENSTGUG00000008462)	KCTD8 (ENSTGUG00000028879)
Common canary	MODERN SPECIES	2	ENSSCAG00000008059	SCFD2 (ENSSCAG00000007948)	RASL11B (ENSSCAG00000007937)	USP46 (ENSSCAG00000007932)	ENSSCAG00000007920 #7	ENSSCAG00000007917	SGCB (ENSSCAG00000007916) #8	ENSSCAG00000007913 #9	DCUN1D4 (ENSSCAG00000007905) #11	CWH43 (ENSSCAG00000007896) #13	OCIAD2 (ENSSCAG00000007887) #14	OCIAD1 (ENSSCAG00000007876) #15	FRYL (ENSSCAG00000007815) #17	SLC10A4 (ENSSCAG00000007792) #19	SLAIN2 (ENSSCAG00000007781) #21	TEC (ENSSCAG00000007764) #22	TXK (ENSSCAG00000007746) #24	NIPAL1 (ENSSCAG00000007741) #25	CNGA1 (ENSSCAG00000007738) #26	NFXL1 (ENSSCAG00000007647) #27	CORIN (ENSSCAG00000007634) #29	ATP10D (ENSSCAG00000007414) #30	COMMD8 (ENSSCAG00000007370) #31	ENSSCAG00000007365	GABRA4 (ENSSCAG00000007358) #33	GABRA2 (ENSSCAG00000007350) #35	GABRG1 (ENSSCAG00000007344) #37	GNPDA2 (ENSSCAG00000007334)	GUF1 (ENSSCAG00000007326)	YIPF7 (ENSSCAG00000007284)	KCTD8 (ENSSCAG00000007279)
Medium ground finch	MODERN SPECIES		ENSGFOG00000005511	ENSGFOG00000005500	SCFD2 (ENSGFOG00000005487)	RASL11B (ENSGFOG00000005477)	USP46 (ENSGFOG00000005447)	ENSGFOG00000005412 #7	SGCB (ENSGFOG00000005393) #8	LRRC66 (ENSGFOG00000005375) #9	DCUN1D4 (ENSGFOG00000005349) #11	CWH43 (ENSGFOG00000005301) #13	OCIAD2 (ENSGFOG00000005274) #14	OCIAD1 (ENSGFOG00000005266) #15	FRYL (ENSGFOG00000002783) #17	SLC10A4 (ENSGFOG00000002588) #19	SLAIN2 (ENSGFOG00000002577) #21	TEC (ENSGFOG00000005021) #22	ENSGFOG00000004998 #24	ENSGFOG00000004991 #25	ENSGFOG00000004984 #25	CNGA1 (ENSGFOG00000004967) #26	ENSGFOG00000004961 #27	ENSGFOG00000004945 #27	CORIN (ENSGFOG00000004927) #29	ATP10D (ENSGFOG00000004905) #30	COMMD8 (ENSGFOG00000004879) #31	ENSGFOG00000004868	GABRA4 (ENSGFOG00000004863) #33	GABRA2 (ENSGFOG00000004850) #35	GABRG1 (ENSGFOG00000004754) #37	GNPDA2 (ENSGFOG00000004726)	GUF1 (ENSGFOG00000004698)
Flycatcher	MODERN SPECIES	22	ENSFALG00000003360	SCFD2 (ENSFALG00000003345)	RASL11B (ENSFALG00000028359)	USP46 (ENSFALG00000003314)	ENSFALG00000003298 #7	SGCB (ENSFALG00000003287) #8	DCUN1D4 (ENSFALG00000003259) #11	ENSFALG00000028702 #9	CWH43 (ENSFALG00000003237) #13	OCIAD1 (ENSFALG00000027572) #15	OCIAD2 (ENSFALG00000027775) #14	FRYL (ENSFALG00000003186) #17	ZAR1 (ENSFALG00000026000) #18	SLC10A4 (ENSFALG00000003162) #19	SLAIN2 (ENSFALG00000003145) #21	TEC (ENSFALG00000003111) #22	TXK (ENSFALG00000026995) #24	NIPAL1 (ENSFALG00000003084) #25	CNGA1 (ENSFALG00000003076) #26	NFXL1 (ENSFALG00000003060) #27	CORIN (ENSFALG00000003050) #29	ATP10D (ENSFALG00000003019) #30	COMMD8 (ENSFALG00000003000) #31	ENSFALG00000002986	GABRA4 (ENSFALG00000002976) #33	GABRA2 (ENSFALG00000002972) #35	GABRG1 (ENSFALG00000002952) #37	GNPDA2 (ENSFALG00000002937)	GUF1 (ENSFALG00000002932)	YIPF7 (ENSFALG00000002930)	KCTD8 (ENSFALG00000002927)
Great tit	MODERN SPECIES	23	ENSPMJG00000006423	SCFD2 (ENSPMJG00000006448)	RASL11B (ENSPMJG00000006450)	USP46 (ENSPMJG00000006453)	ENSPMJG00000006558 #7	SGCB (ENSPMJG00000006559) #8	ENSPMJG00000006565 #9	DCUN1D4 (ENSPMJG00000006567) #11	CWH43 (ENSPMJG00000006578) #13	ENSPMJG00000006591	OCIAD1 (ENSPMJG00000006601) #15	FRYL (ENSPMJG00000006744) #17	ZAR1 (ENSPMJG00000015533) #18	SLC10A4 (ENSPMJG00000015534) #19	SLAIN2 (ENSPMJG00000015535) #21	TEC (ENSPMJG00000015536) #22	TXK (ENSPMJG00000015537) #24	ENSPMJG00000015538 #25	ENSPMJG00000015539 #25	CNGA1 (ENSPMJG00000015540) #26	NFXL1 (ENSPMJG00000015541) #27	CORIN (ENSPMJG00000015542) #29	ATP10D (ENSPMJG00000015543) #30	COMMD8 (ENSPMJG00000015544) #31	ENSPMJG00000015545	GABRA4 (ENSPMJG00000015546) #33	GABRA2 (ENSPMJG00000015547) #35	GABRG1 (ENSPMJG00000015548) #37	GNPDA2 (ENSPMJG00000015551)	GUF1 (ENSPMJG00000015552)	YIPF7 (ENSPMJG00000015553)
Galloanserae	ANCESTRAL SPECIES	5	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Anatidae	ANCESTRAL SPECIES	2	ENSGT01060000248860	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Pink-footed goose	MODERN SPECIES	136	ENSABRG00000000319	SCFD2 (ENSABRG00000000436)	RASL11B (ENSABRG00000000460)	USP46 (ENSABRG00000000494)	SPATA18 (ENSABRG00000000526) #7	SGCB (ENSABRG00000000639) #8	ENSABRG00000000649 #9	DCUN1D4 (ENSABRG00000000663) #11	CWH43 (ENSABRG00000001332) #13	ENSABRG00000001608	OCIAD1 (ENSABRG00000001632) #15	FRYL (ENSABRG00000003052) #17	ZAR1 (ENSABRG00000015099) #18	SLC10A4 (ENSABRG00000015108) #19	SLAIN2 (ENSABRG00000015124) #21	TEC (ENSABRG00000015150) #22	TXK (ENSABRG00000015162) #24	NIPAL1 (ENSABRG00000015170) #25	CNGA1 (ENSABRG00000015173) #26	NFXL1 (ENSABRG00000015177) #27	CORIN (ENSABRG00000015186) #29	ATP10D (ENSABRG00000015189) #30	COMMD8 (ENSABRG00000015203) #31	ENSABRG00000015207
Duck	MODERN SPECIES	22	ENSAPLG00000003042	SCFD2 (ENSAPLG00000022972)	RASL11B (ENSAPLG00000002875)	USP46 (ENSAPLG00000003005)	SPATA18 (ENSAPLG00000003130) #7	SGCB (ENSAPLG00000003393) #8	ENSAPLG00000024904 #9	DCUN1D4 (ENSAPLG00000003414) #11	CWH43 (ENSAPLG00000003773) #13	OCIAD2 (ENSAPLG00000026944) #14	OCIAD1 (ENSAPLG00000027836) #15	FRYL (ENSAPLG00000004113) #17	ZAR1 (ENSAPLG00000020654) #18	SLC10A4 (ENSAPLG00000001667) #19	SLAIN2 (ENSAPLG00000005671) #21	TEC (ENSAPLG00000009593) #22	TXK (ENSAPLG00000010285) #24	NIPAL1 (ENSAPLG00000026168) #25	CNGA1 (ENSAPLG00000010470) #26	CORIN (ENSAPLG00000010874) #29	NFXL1 (ENSAPLG00000010735) #27	ATP10D (ENSAPLG00000011330) #30	COMMD8 (ENSAPLG00000011707) #31	ENSAPLG00000021812	ENSAPLG00000011813	GABRA4 (ENSAPLG00000011884) #33	GABRA2 (ENSAPLG00000015376) #35	GABRG1 (ENSAPLG00000015591) #37	GNPDA2 (ENSAPLG00000009862)	GUF1 (ENSAPLG00000009504)	YIPF7 (ENSAPLG00000009441)
Phasianidae	ANCESTRAL SPECIES	2	ENSGT00940000158757	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935.d #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000166149	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Japanese quail	MODERN SPECIES	22	LNX1 (ENSCJPG00005010702)	ENSCJPG00005010703	SCFD2 (ENSCJPG00005010704)	RASL11B (ENSCJPG00005010705)	USP46 (ENSCJPG00005010708)	SPATA18 (ENSCJPG00005010710) #7	SGCB (ENSCJPG00005010711) #8	ENSCJPG00005010712 #9	DCUN1D4 (ENSCJPG00005010713) #11	ENSCJPG00005010722 #13	OCIAD1 (ENSCJPG00005010723) #15	FRYL (ENSCJPG00005010730) #17	ZAR1 (ENSCJPG00005016502) #18	SLC10A4 (ENSCJPG00005016503) #19	SLAIN2 (ENSCJPG00005016504) #21	TEC (ENSCJPG00005016505) #22	TXK (ENSCJPG00005016537) #24	NIPAL1 (ENSCJPG00005016576) #25	CNGA1 (ENSCJPG00005016585) #26	NFXL1 (ENSCJPG00005016586) #27	CORIN (ENSCJPG00005016592) #29	ATP10D (ENSCJPG00005016857) #30	COMMD8 (ENSCJPG00005016930) #31	GABRA4 (ENSCJPG00005016962) #33	GABRA2 (ENSCJPG00005016972) #35	GABRG1 (ENSCJPG00005016974) #37	GNPDA2 (ENSCJPG00005016980)	GUF1 (ENSCJPG00005016982)	YIPF7 (ENSCJPG00005016995)	KCTD8 (ENSCJPG00005016998)	GRXCR1 (ENSCJPG00005017008)
Phasianidae_b	ANCESTRAL SPECIES	4	ENSGT00940000158757	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935.d #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000166149	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Chicken	MODERN SPECIES	33	LNX1 (ENSGALG00010014199)	ENSGALG00010014249	SCFD2 (ENSGALG00010014267)	RASL11B (ENSGALG00010013556)	USP46 (ENSGALG00010016451)	SPATA18 (ENSGALG00010016507) #7	SGCB (ENSGALG00010016547) #8	ENSGALG00010016552 #9	DCUN1D4 (ENSGALG00010016560) #11	CWH43 (ENSGALG00010016575) #13	FRYL (ENSGALG00010016597) #17	OCIAD1 (ENSGALG00010016640) #15	ZAR1 (ENSGALG00010016658) #18	SLC10A4 (ENSGALG00010016674) #19	SLAIN2 (ENSGALG00010016767) #21	TEC (ENSGALG00010016851) #22	TXK (ENSGALG00010016862) #24	NIPAL1 (ENSGALG00010016868) #25	CNGA1 (ENSGALG00010016871) #26	NFXL1 (ENSGALG00010013901) #27	CORIN (ENSGALG00010013434) #29	ATP10D (ENSGALG00010013459) #30	COMMD8 (ENSGALG00010013638) #31	GABRA4 (ENSGALG00010013661) #33	GABRA2 (ENSGALG00010014303) #35	GABRG1 (ENSGALG00010013677) #37	GNPDA2 (ENSGALG00010013740)	GUF1 (ENSGALG00010013823)	YIPF7 (ENSGALG00010013846)	KCTD8 (ENSGALG00010013866)	GRXCR1 (ENSGALG00010013884)
Turkey	MODERN SPECIES	24	ENSMGAG00000017779	FGL1 (ENSMGAG00000011521)	ENSMGAG00000011485	ENSMGAG00000011492	ENSMGAG00000011493	ENSMGAG00000011481	ENSMGAG00000012077 #33	ENSMGAG00000012064 #31	ENSMGAG00000012065	ENSMGAG00000022846 #30	ENSMGAG00000012060 #30	ENSMGAG00000019483 #29	ENSMGAG00000012041 #27	ENSMGAG00000012038 #26	ENSMGAG00000012031 #25	TEC (ENSMGAG00000012004) #22	TXK (ENSMGAG00000012022) #24	SLAIN2 (ENSMGAG00000011995) #21	ENSMGAG00000011992 #19	ENSMGAG00000017676 #17	ENSMGAG00000011949 #17	ENSMGAG00000019084 #17	ENSMGAG00000015734 #15	ENSMGAG00000011942 #13	ENSMGAG00000021395 #11	SGCB (ENSMGAG00000011936) #8	ENSMGAG00000022028 #9	ENSMGAG00000011938 #11	SPATA18 (ENSMGAG00000011922) #7	ENSMGAG00000011913	ENSMGAG00000011904
African ostrich	MODERN SPECIES	856	ENSSCUG00000018304	ENSSCUG00000018305	ENSSCUG00000018306	SCFD2 (ENSSCUG00000018310)	RASL11B (ENSSCUG00000018316)	USP46 (ENSSCUG00000018319)	SPATA18 (ENSSCUG00000018323) #7	SGCB (ENSSCUG00000018326) #8	ENSSCUG00000018327 #9	DCUN1D4 (ENSSCUG00000018328) #11	CWH43 (ENSSCUG00000018330) #13	OCIAD2 (ENSSCUG00000018332) #14	OCIAD1 (ENSSCUG00000018333) #15	FRYL (ENSSCUG00000018539) #17	SLAIN2 (ENSSCUG00000018723) #21	TEC (ENSSCUG00000018724) #22	TXK (ENSSCUG00000018725) #24	NIPAL1 (ENSSCUG00000018726) #25	CNGA1 (ENSSCUG00000018727) #26	NFXL1 (ENSSCUG00000018729) #27	CORIN (ENSSCUG00000018731) #29	ATP10D (ENSSCUG00000018732) #30	COMMD8 (ENSSCUG00000018735) #31	ENSSCUG00000018737	GABRA4 (ENSSCUG00000018739) #33	GABRA2 (ENSSCUG00000018740) #35	ENSSCUG00000018741 #37	ENSSCUG00000018742 #37
Australian saltwater crocodile	MODERN SPECIES	65	ENSCPRG00005010130	SCFD2 (ENSCPRG00005010093)	RASL11B (ENSCPRG00005010044)	USP46 (ENSCPRG00005010022)	ENSCPRG00005009994 #7	ENSCPRG00005009991	SGCB (ENSCPRG00005009985) #8	ENSCPRG00005009969 #9	DCUN1D4 (ENSCPRG00005009960) #11	CWH43 (ENSCPRG00005009951) #13	OCIAD1 (ENSCPRG00005009942) #15	FRYL (ENSCPRG00005009879) #17	SLC10A4 (ENSCPRG00005009865) #19	SLAIN2 (ENSCPRG00005009862) #21	ENSCPRG00005009858	TEC (ENSCPRG00005009851) #22	ENSCPRG00005009847	TXK (ENSCPRG00005009839) #24	NIPAL1 (ENSCPRG00005009829) #25	CNGA1 (ENSCPRG00005009825) #26	NFXL1 (ENSCPRG00005009686) #27	CORIN (ENSCPRG00005009646) #29	ATP10D (ENSCPRG00005009601) #30	ENSCPRG00005009589	COMMD8 (ENSCPRG00005009585) #31	ENSCPRG00005009573	GABRA4 (ENSCPRG00005009554) #33	ENSCPRG00005009537	GABRA2 (ENSCPRG00005009528) #35	GABRG1 (ENSCPRG00005009520) #37	ENSCPRG00005009517
Cryptodira	ANCESTRAL SPECIES	2	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.q.a #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000177950.a	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Testudinoidea	ANCESTRAL SPECIES	10	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935.b.b #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.q.a #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000177950.a	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Emydidae	DUPLICATION
Emydidae	ANCESTRAL SPECIES	1	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935.b.b #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.q.a #19	ENSGT00950000182808.a.a.b.b.q.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b.a #22	ENSGT00940000177950.a	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00950000185515	ENSGT00390000014316.c.a	ENSGT00550000074940
Three-toed box turtle	MODERN SPECIES	26	RASL11B (ENSTMTG00000013476)	ENSTMTG00000013485	USP46 (ENSTMTG00000013510)	ENSTMTG00000013524 #7	ENSTMTG00000013545 #7	SGCB (ENSTMTG00000013568) #8	LRRC66 (ENSTMTG00000013578) #9	DCUN1D4 (ENSTMTG00000013593) #11	CWH43 (ENSTMTG00000013618) #13	ENSTMTG00000013647	FRYL (ENSTMTG00000014214) #17	ZAR1 (ENSTMTG00000020742) #18	ENSTMTG00000020748 #19	ENSTMTG00000020753 #19	SLAIN2 (ENSTMTG00000020760) #21	TEC (ENSTMTG00000020779) #22	ENSTMTG00000020790	TXK (ENSTMTG00000020804) #24	ENSTMTG00000020841 #25	ENSTMTG00000020847 #25	CNGA1 (ENSTMTG00000020855) #26	NFXL1 (ENSTMTG00000020863) #27	CORIN (ENSTMTG00000020890) #29	ATP10D (ENSTMTG00000020968) #30	COMMD8 (ENSTMTG00000020989) #31	ENSTMTG00000020997	GABRA4 (ENSTMTG00000021010) #33	GABRA2 (ENSTMTG00000021020) #35	GABRG1 (ENSTMTG00000021040) #37	ENSTMTG00000021050	GNPDA2 (ENSTMTG00000021056)
painted turtle	MODERN SPECIES	13	RASL11B (ENSCPBG00000025014)	ENSCPBG00000025012	USP46 (ENSCPBG00000025005)	SPATA18 (ENSCPBG00000025002) #7	SGCB (ENSCPBG00000024999) #8	DCUN1D4 (ENSCPBG00000024995) #11	CWH43 (ENSCPBG00000024990) #13	OCIAD2 (ENSCPBG00000024984) #14	OCIAD1 (ENSCPBG00000024981) #15	FRYL (ENSCPBG00000024971) #17	ZAR1 (ENSCPBG00000024965) #18	ENSCPBG00000024962 #19	ENSCPBG00000024959 #19	SLAIN2 (ENSCPBG00000024953) #21	ENSCPBG00000024950 #22	ENSCPBG00000024944 #22	TXK (ENSCPBG00000024941) #24	NIPAL1 (ENSCPBG00000024934) #25	CNGA1 (ENSCPBG00000024931) #26	NFXL1 (ENSCPBG00000024927) #27	ENSCPBG00000024920 #29	ENSCPBG00000024917	SEMA6D (ENSCPBG00000024906)	SLC24A5 (ENSCPBG00000024902)	MYEF2 (ENSCPBG00000024789)	CTXN2 (ENSCPBG00000024781)	SLC12A1 (ENSCPBG00000024778)	DUT (ENSCPBG00000024775)	FBN1 (ENSCPBG00000024763)	CEP152 (ENSCPBG00000024756)	SHC4 (ENSCPBG00000024752)
Emydidae	ANCESTRAL SPECIES																	ENSGT00940000155951.b.b #22
painted turtle	MODERN SPECIES	13	SCFD2 (ENSCPBG00000025016)	RASL11B (ENSCPBG00000025014)	ENSCPBG00000025012	USP46 (ENSCPBG00000025005)	SPATA18 (ENSCPBG00000025002) #7	SGCB (ENSCPBG00000024999) #8	DCUN1D4 (ENSCPBG00000024995) #11	CWH43 (ENSCPBG00000024990) #13	OCIAD2 (ENSCPBG00000024984) #14	OCIAD1 (ENSCPBG00000024981) #15	FRYL (ENSCPBG00000024971) #17	ZAR1 (ENSCPBG00000024965) #18	ENSCPBG00000024962 #19	ENSCPBG00000024959 #19	SLAIN2 (ENSCPBG00000024953) #21	ENSCPBG00000024950 #22	ENSCPBG00000024944 #22	TXK (ENSCPBG00000024941) #24	NIPAL1 (ENSCPBG00000024934) #25	CNGA1 (ENSCPBG00000024931) #26	NFXL1 (ENSCPBG00000024927) #27	ENSCPBG00000024920 #29	ENSCPBG00000024917	SEMA6D (ENSCPBG00000024906)	SLC24A5 (ENSCPBG00000024902)	MYEF2 (ENSCPBG00000024789)	CTXN2 (ENSCPBG00000024781)	SLC12A1 (ENSCPBG00000024778)	DUT (ENSCPBG00000024775)	FBN1 (ENSCPBG00000024763)	CEP152 (ENSCPBG00000024756)
Testudinidae	ANCESTRAL SPECIES	11	ENSGT00940000158757	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00940000156935.b.b #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.q.a #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000177950.a	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Goode s thornscrub tortoise	MODERN SPECIES	19	ENSGEVG00005013350	SCFD2 (ENSGEVG00005013200)	RASL11B (ENSGEVG00005013148)	USP46 (ENSGEVG00005013092)	ENSGEVG00005012992 #7	ENSGEVG00005012945 #7	SGCB (ENSGEVG00005012678) #8	DCUN1D4 (ENSGEVG00005012584) #11	CWH43 (ENSGEVG00005012465) #13	OCIAD2 (ENSGEVG00005012436) #14	OCIAD1 (ENSGEVG00005012410) #15	FRYL (ENSGEVG00005012010) #17	ZAR1 (ENSGEVG00005011641) #18	SLC10A4 (ENSGEVG00005011595) #19	SLAIN2 (ENSGEVG00005011517) #21	TEC (ENSGEVG00005011447) #22	ENSGEVG00005011413	TXK (ENSGEVG00005011330) #24	NIPAL1 (ENSGEVG00005010932) #25	CNGA1 (ENSGEVG00005010834) #26	NFXL1 (ENSGEVG00005010333) #27	CORIN (ENSGEVG00005010056) #29	ATP10D (ENSGEVG00005009982) #30	COMMD8 (ENSGEVG00005009671) #31	ENSGEVG00005009566	GABRA4 (ENSGEVG00005009455) #33	GABRA2 (ENSGEVG00005009260) #35	GABRG1 (ENSGEVG00005008456) #37	GNPDA2 (ENSGEVG00005008320)	GUF1 (ENSGEVG00005008251)	YIPF7 (ENSGEVG00005008141)
Abingdon island giant tortoise	MODERN SPECIES	2668												FRYL (ENSCABG00000007184) #17	ZAR1 (ENSCABG00000007181) #18	SLC10A4 (ENSCABG00000007180) #19	SLAIN2 (ENSCABG00000007178) #21	TEC (ENSCABG00000007175) #22	ENSCABG00000007173	TXK (ENSCABG00000007144) #24	NIPAL1 (ENSCABG00000007142) #25	CNGA1 (ENSCABG00000007140) #26	ENSCABG00000007139 #27
Chinese turtle	MODERN SPECIES	318	ENSPSIG00000005407	ENSPSIG00000005201	ENSPSIG00000005150	RASL11B (ENSPSIG00000005031)	USP46 (ENSPSIG00000017105)	SPATA18 (ENSPSIG00000016758) #7	SGCB (ENSPSIG00000016727) #8	DCUN1D4 (ENSPSIG00000016618) #11	CWH43 (ENSPSIG00000016496) #13	OCIAD2 (ENSPSIG00000016365) #14	OCIAD1 (ENSPSIG00000016211) #15	FRYL (ENSPSIG00000015534) #17	ZAR1 (ENSPSIG00000015524) #18	SLC10A4 (ENSPSIG00000015496) #19	SLAIN2 (ENSPSIG00000015175) #21	TEC (ENSPSIG00000013492) #22	TXK (ENSPSIG00000012790) #24	NIPAL1 (ENSPSIG00000011781) #25	CNGA1 (ENSPSIG00000011134) #26	NFXL1 (ENSPSIG00000010167) #27
Lepidosauria	ANCESTRAL SPECIES	9	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532.q #7	ENSGT00960000189468	ENSGT00390000013532.r #7	ENSGT00390000008110 #8	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160857 #24	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00390000018141.bb	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37
Episquamata	ANCESTRAL SPECIES	3	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532.q #7	ENSGT00960000189468	ENSGT00390000013532.r #7	ENSGT00390000008110 #8	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00390000018141.bb	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a
Toxicofera	ANCESTRAL SPECIES	21	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532.q #7	ENSGT00960000189468	ENSGT00390000013532.r #7	ENSGT00390000008110 #8	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041
Elapidae	ANCESTRAL SPECIES	22	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT01060000251732	ENSGT00390000013532.q #7	ENSGT00960000189468	ENSGT00390000013532.r #7	ENSGT00390000008110 #8	ENSGT00940000156935 #11	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059.q #27	ENSGT00940000157103 #29	ENSGT00500000044920	ENSGT00390000005261	ENSGT00940000157580	ENSGT00940000160654	ENSGT00940000162193	ENSGT00940000158640	ENSGT00940000159453	ENSGT00960000187690	ENSGT00940000161471	ENSGT00440000033811.d	ENSGT00440000033811.c
Elapidae_a	ANCESTRAL SPECIES	25	ENSGT00940000162578	ENSGT00390000011192.e	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT01060000251732	ENSGT00390000013532.q #7	ENSGT00960000189468	ENSGT00390000013532.r #7	ENSGT00390000008110 #8	ENSGT00940000156935 #11	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160022.j #25	ENSGT00940000156074 #26	ENSGT00940000157059.q #27	ENSGT00940000157103 #29	ENSGT00500000044920	ENSGT00390000005261	ENSGT00940000157580	ENSGT00940000160654	ENSGT00940000162193	ENSGT00940000158640	ENSGT00940000159453	ENSGT00960000187690	ENSGT00940000161471	ENSGT00440000033811.d	ENSGT00440000033811.c
Blue-lipped sea krait	DUPLICATION
Blue-lipped sea krait	MODERN SPECIES	3997																ENSLLTG00000004152 #22	ENSLLTG00000004125 #25
Blue-lipped sea krait	MODERN SPECIES	2939																ENSLLTG00000017348 #22	OCIAD1 (ENSLLTG00000017351) #15
Acanthophiinae	ANCESTRAL SPECIES	4	ENSGT00940000162578	ENSGT00390000011192.e	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT01060000251732	ENSGT00390000013532.q #7	ENSGT00960000189468	ENSGT00390000013532.r #7	ENSGT00390000008110 #8	ENSGT00940000156935 #11	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160022.j #25	ENSGT00940000156074 #26	ENSGT00940000157059.q #27	ENSGT00940000157103 #29	ENSGT00500000044920	ENSGT00390000005261	ENSGT00940000157580	ENSGT00940000160654	ENSGT00940000162193	ENSGT00940000158640	ENSGT00940000159453	ENSGT00960000187690	ENSGT00940000161471	ENSGT00440000033811.d	ENSGT00440000033811.c
Mainland tiger snake	DUPLICATION
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	83		USP46 (ENSNSUG00000003513)	ENSNSUG00000003514	SPATA18 (ENSNSUG00000003515) #7	ENSNSUG00000003519	SGCB (ENSNSUG00000003521) #8	DCUN1D4 (ENSNSUG00000003530) #11	OCIAD1 (ENSNSUG00000003543) #15	ENSNSUG00000003550 #17	ENSNSUG00000003552 #17	ENSNSUG00000003554 #17	ZAR1 (ENSNSUG00000003557) #18	ENSNSUG00000003571 #19	ENSNSUG00000003578 #19	SLAIN2 (ENSNSUG00000003579) #21	ENSNSUG00000003585 #22	ENSNSUG00000003587 #22	ENSNSUG00000003591 #22	ENSNSUG00000003636 #25	ENSNSUG00000003637 #25	CNGA1 (ENSNSUG00000003644) #26	NFXL1 (ENSNSUG00000003672) #27	CORIN (ENSNSUG00000003980) #29	SRD5A3 (ENSNSUG00000004104)	TMEM165 (ENSNSUG00000004106)	CLOCK (ENSNSUG00000004108)	PDCL2 (ENSNSUG00000004116)	EXOC1L (ENSNSUG00000004124)	EXOC1 (ENSNSUG00000004129)	CEP135 (ENSNSUG00000004544)	ENSNSUG00000004571
Mainland tiger snake	MODERN SPECIES	83	USP46 (ENSNSUG00000003513)	ENSNSUG00000003514	SPATA18 (ENSNSUG00000003515) #7	ENSNSUG00000003519	SGCB (ENSNSUG00000003521) #8	DCUN1D4 (ENSNSUG00000003530) #11	OCIAD1 (ENSNSUG00000003543) #15	ENSNSUG00000003550 #17	ENSNSUG00000003552 #17	ENSNSUG00000003554 #17	ZAR1 (ENSNSUG00000003557) #18	ENSNSUG00000003571 #19	ENSNSUG00000003578 #19	SLAIN2 (ENSNSUG00000003579) #21	ENSNSUG00000003585 #22	ENSNSUG00000003587 #22	ENSNSUG00000003591 #22	ENSNSUG00000003636 #25	ENSNSUG00000003637 #25	CNGA1 (ENSNSUG00000003644) #26	NFXL1 (ENSNSUG00000003672) #27	CORIN (ENSNSUG00000003980) #29	SRD5A3 (ENSNSUG00000004104)	TMEM165 (ENSNSUG00000004106)	CLOCK (ENSNSUG00000004108)	PDCL2 (ENSNSUG00000004116)	EXOC1L (ENSNSUG00000004124)	EXOC1 (ENSNSUG00000004129)	CEP135 (ENSNSUG00000004544)	ENSNSUG00000004571	CRACD (ENSNSUG00000004574)
Mainland tiger snake	MODERN SPECIES	83	ENSNSUG00000003514	SPATA18 (ENSNSUG00000003515) #7	ENSNSUG00000003519	SGCB (ENSNSUG00000003521) #8	DCUN1D4 (ENSNSUG00000003530) #11	OCIAD1 (ENSNSUG00000003543) #15	ENSNSUG00000003550 #17	ENSNSUG00000003552 #17	ENSNSUG00000003554 #17	ZAR1 (ENSNSUG00000003557) #18	ENSNSUG00000003571 #19	ENSNSUG00000003578 #19	SLAIN2 (ENSNSUG00000003579) #21	ENSNSUG00000003585 #22	ENSNSUG00000003587 #22	ENSNSUG00000003591 #22	ENSNSUG00000003636 #25	ENSNSUG00000003637 #25	CNGA1 (ENSNSUG00000003644) #26	NFXL1 (ENSNSUG00000003672) #27	CORIN (ENSNSUG00000003980) #29	SRD5A3 (ENSNSUG00000004104)	TMEM165 (ENSNSUG00000004106)	CLOCK (ENSNSUG00000004108)	PDCL2 (ENSNSUG00000004116)	EXOC1L (ENSNSUG00000004124)	EXOC1 (ENSNSUG00000004129)	CEP135 (ENSNSUG00000004544)	ENSNSUG00000004571	CRACD (ENSNSUG00000004574)	AASDH (ENSNSUG00000004590)
Eastern brown snake	MODERN SPECIES	12	LNX1 (ENSPTXG00000005286)	ENSPTXG00000005905	SCFD2 (ENSPTXG00000005906)	RASL11B (ENSPTXG00000005909)	USP46 (ENSPTXG00000005910)	ENSPTXG00000005911 #7	ENSPTXG00000005912 #7	SGCB (ENSPTXG00000005913) #8	DCUN1D4 (ENSPTXG00000005914) #11	ENSPTXG00000005915	FRYL (ENSPTXG00000005918) #17	ZAR1 (ENSPTXG00000005921) #18	ENSPTXG00000005922 #19	ENSPTXG00000005923 #19	SLAIN2 (ENSPTXG00000005924) #21	TEC (ENSPTXG00000005931) #22	ENSPTXG00000006211 #25	ENSPTXG00000006213 #25	CNGA1 (ENSPTXG00000006215) #26	NFXL1 (ENSPTXG00000006219) #27	CORIN (ENSPTXG00000006239) #29	SRD5A3 (ENSPTXG00000006241)	TMEM165 (ENSPTXG00000006242)	CLOCK (ENSPTXG00000006244)	PDCL2 (ENSPTXG00000006249)	EXOC1L (ENSPTXG00000006250)	EXOC1 (ENSPTXG00000006254)	CEP135 (ENSPTXG00000006257)	ENSPTXG00000006266	CRACD (ENSPTXG00000006268)	ENSPTXG00000006270
Indian cobra	MODERN SPECIES	3	LNX1 (ENSNNAG00000014069)	ENSNNAG00000014116	SCFD2 (ENSNNAG00000014166)	RASL11B (ENSNNAG00000014208)	ENSNNAG00000014225	USP46 (ENSNNAG00000014235)	ENSNNAG00000014256	ENSNNAG00000014270 #7	ENSNNAG00000014290 #7	SGCB (ENSNNAG00000014302) #8	DCUN1D4 (ENSNNAG00000014313) #11	FRYL (ENSNNAG00000014954) #17	ZAR1 (ENSNNAG00000018449) #18	SLC10A4 (ENSNNAG00000018453) #19	SLAIN2 (ENSNNAG00000018455) #21	TEC (ENSNNAG00000018474) #22	NIPAL1 (ENSNNAG00000018534) #25	CNGA1 (ENSNNAG00000018542) #26	NFXL1 (ENSNNAG00000018558) #27	CORIN (ENSNNAG00000018585) #29	TMEM165 (ENSNNAG00000018659)	CLOCK (ENSNNAG00000018683)	PDCL2 (ENSNNAG00000018769)	EXOC1L (ENSNNAG00000018770)	EXOC1 (ENSNNAG00000018773)	CEP135 (ENSNNAG00000018789)	ENSNNAG00000018815	ENSNNAG00000018819	AASDH (ENSNNAG00000018821)	PPAT (ENSNNAG00000018828)	PAICS (ENSNNAG00000018837)
Lizard	MODERN SPECIES	907	ENSACAG00000005847	RASL11B (ENSACAG00000005848)	USP46 (ENSACAG00000005889)	SPATA18 (ENSACAG00000005954) #7	ENSACAG00000037862	SGCB (ENSACAG00000005999) #8	DCUN1D4 (ENSACAG00000037576) #11	CWH43 (ENSACAG00000039310) #13	OCIAD1 (ENSACAG00000006106) #15	ENSACAG00000043759 #17	ENSACAG00000039016	ENSACAG00000006131 #17	ZAR1 (ENSACAG00000006354) #18	SLC10A4 (ENSACAG00000006369) #19	SLAIN2 (ENSACAG00000006385) #21	TEC (ENSACAG00000006427) #22	NIPAL1 (ENSACAG00000045193) #25	CNGA1 (ENSACAG00000006622) #26	NFXL1 (ENSACAG00000006640) #27	CORIN (ENSACAG00000006661) #29	ENSACAG00000038555	COMMD8 (ENSACAG00000006763) #31	ENSACAG00000006768	GABRA4 (ENSACAG00000006845) #33
Laterata	ANCESTRAL SPECIES	21	ENSGT00940000158757	ENSGT01080000257472	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532.q #7	ENSGT00390000008110 #8	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b.r #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00390000018141.bb	ENSGT01100000263481	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940	ENSGT00940000153168.C.a.b
Common wall lizard	MODERN SPECIES	17	PDS5A (ENSPMRG00000014082)	N4BP2 (ENSPMRG00000014104)	RHOH (ENSPMRG00000014130)	CHRNA9 (ENSPMRG00000009026)	RBM47 (ENSPMRG00000009040)	SGCB (ENSPMRG00000009051) #8	DCUN1D4 (ENSPMRG00000009062) #11	CWH43 (ENSPMRG00000009074) #13	OCIAD2 (ENSPMRG00000009088) #14	OCIAD1 (ENSPMRG00000009093) #15	FRYL (ENSPMRG00000009473) #17	ZAR1 (ENSPMRG00000011637) #18	ENSPMRG00000011646 #19	ENSPMRG00000011653 #19	SLAIN2 (ENSPMRG00000011657) #21	TEC (ENSPMRG00000011722) #22	NIPAL1 (ENSPMRG00000011955) #25	CNGA1 (ENSPMRG00000011962) #26	NFXL1 (ENSPMRG00000011979) #27	ENSPMRG00000012048	CORIN (ENSPMRG00000012049) #29	ATP10D (ENSPMRG00000012061) #30	COMMD8 (ENSPMRG00000012073) #31	ENSPMRG00000012076	ENSPMRG00000012081	GABRA4 (ENSPMRG00000012086) #33	ENSPMRG00000012089 #35	ENSPMRG00000012092 #35	GABRG1 (ENSPMRG00000012096) #37	ENSPMRG00000012104	GNPDA2 (ENSPMRG00000012107)
Argentine black and white tegu	MODERN SPECIES	1	LNX1 (ENSSMRG00000005012)	FIP1L1 (ENSSMRG00000004969)	SCFD2 (ENSSMRG00000004955)	RASL11B (ENSSMRG00000004911)	USP46 (ENSSMRG00000004888)	SPATA18 (ENSSMRG00000004846) #7	SGCB (ENSSMRG00000004829) #8	DCUN1D4 (ENSSMRG00000004820) #11	OCIAD1 (ENSSMRG00000004814) #15	ENSSMRG00000004807 #14	FRYL (ENSSMRG00000004609) #17	ZAR1 (ENSSMRG00000004606) #18	ENSSMRG00000004603 #19	ENSSMRG00000004588 #19	SLAIN2 (ENSSMRG00000004587) #21	TEC (ENSSMRG00000004335) #22	ENSSMRG00000004325 #25	ENSSMRG00000004324 #25	CNGA1 (ENSSMRG00000004318) #26	NFXL1 (ENSSMRG00000004304) #27	CORIN (ENSSMRG00000004292) #29	ATP10D (ENSSMRG00000004241) #30	COMMD8 (ENSSMRG00000004239) #31	GABRB1 (ENSSMRG00000003697) #32	GABRA4 (ENSSMRG00000003686) #33	ENSSMRG00000003680 #33	GABRA2 (ENSSMRG00000003592) #35	GABRG1 (ENSSMRG00000003579) #37	GUF1 (ENSSMRG00000003561)	GNPDA2 (ENSSMRG00000003550)	YIPF7 (ENSSMRG00000003547)
tuatara	MODERN SPECIES	1623	ENSSPUG00000017303	RASL11B (ENSSPUG00000017298)	USP46 (ENSSPUG00000017280)	SPATA18 (ENSSPUG00000017244) #7	SGCB (ENSSPUG00000017221) #8	DCUN1D4 (ENSSPUG00000017210) #11	CWH43 (ENSSPUG00000017192) #13	ENSSPUG00000017180	OCIAD1 (ENSSPUG00000017169) #15	ENSSPUG00000017162	FRYL (ENSSPUG00000017081) #17	ENSSPUG00000017035 #19	ZAR1 (ENSSPUG00000016961) #18	ENSSPUG00000016935 #19	SLAIN2 (ENSSPUG00000016889) #21	TEC (ENSSPUG00000016858) #22	TXK (ENSSPUG00000016836) #24	CNGA1 (ENSSPUG00000016814) #26	ENSSPUG00000016799 #27	ENSSPUG00000016792	ENSSPUG00000016785 #27	ENSSPUG00000016778	CORIN (ENSSPUG00000016762) #29	ENSSPUG00000016749 #30	ENSSPUG00000016745 #30	ENSSPUG00000016725 #30	COMMD8 (ENSSPUG00000016703) #31	ENSSPUG00000016679	ENSSPUG00000016666 ##32	GABRA4 (ENSSPUG00000016648) #33	GABRA2 (ENSSPUG00000016623) #35
Anura	ANCESTRAL SPECIES	2	ENSGT00390000003601.b	ENSGT00940000158757	ENSGT00940000162578	ENSGT00390000011192	ENSGT00940000158643	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.b ##14	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000157266 #35	ENSGT00550000074940	ENSGT00390000014316.c.a	ENSGT00940000153168.C.a.b	ENSGT00940000161041.m	ENSGT00940000159219	ENSGT00940000157110	ENSGT00940000161360
Frog	MODERN SPECIES		gsx2 (ENSXETG00000021030)	chic2 (ENSXETG00000011681)	lnx1 (ENSXETG00000011680)	fip1l1 (ENSXETG00000011679)	ENSXETG00000041706	scfd2 (ENSXETG00000011678)	rasl11b (ENSXETG00000011677)	sgcb (ENSXETG00000011676) #8	ENSXETG00000044544 #9	ociad2 (ENSXETG00000011674) #14	ociad1 (ENSXETG00000011673) ##14	fryl (ENSXETG00000004391) #17	zar1 (ENSXETG00000041194) #18	slc10a4 (ENSXETG00000047027) #19	slain2 (ENSXETG00000009829) #21	dennd1a (ENSXETG00000009831) #22	nipal1 (ENSXETG00000038744) #25	cnga1 (ENSXETG00000009833) #26	nfxl1 (ENSXETG00000009836) #27	rbm42 (ENSXETG00000009837) #29	atp10d (ENSXETG00000009839) #30	commd8 (ENSXETG00000009843) #31	gabrb1 (ENSXETG00000009845)	gabra2 (ENSXETG00000008421) #35	guf1 (ENSXETG00000008432)	gnpda2 (ENSXETG00000008437)	yipf7 (ENSXETG00000037208)	KCTD8 (ENSXETG00000046496)	ENSXETG00000008440	ENSXETG00000045834	grxcr1 (ENSXETG00000039881)
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000006883	ENSLLEG00000006974	SGCB (ENSLLEG00000007000) #8	ENSLLEG00000007092 #7	ENSLLEG00000007195 #7	ENSLLEG00000007269 #9	DCUN1D4 (ENSLLEG00000007342) #11	ENSLLEG00000007709	ENSLLEG00000007718	OCIAD2 (ENSLLEG00000007734) #14	ENSLLEG00000007766 ##14	FRYL (ENSLLEG00000007825) #17	ZAR1 (ENSLLEG00000008045) #18	SLC10A4 (ENSLLEG00000008161) #19	SLAIN2 (ENSLLEG00000008258) #21	TEC (ENSLLEG00000008350) #22	NIPAL1 (ENSLLEG00000008866) #25	ENSLLEG00000008940	CNGA1 (ENSLLEG00000009154) #26	NFXL1 (ENSLLEG00000009241) #27	CORIN (ENSLLEG00000009613) #29	ENSLLEG00000010080	ATP10D (ENSLLEG00000010120) #30	COMMD8 (ENSLLEG00000010299) #31	ENSLLEG00000010418	ENSLLEG00000010449 ##32	ENSLLEG00000010507	GABRA2 (ENSLLEG00000010613) #35	GUF1 (ENSLLEG00000011682)	GNPDA2 (ENSLLEG00000011805)	YIPF7 (ENSLLEG00000011950)
Coelacanth	MODERN SPECIES	680							SGCB (ENSLACG00000015531) #8	DCUN1D4 (ENSLACG00000015075) #11	CWH43 (ENSLACG00000014726) #13	OCIAD2 (ENSLACG00000014231) #14	ENSLACG00000014161	OCIAD1 (ENSLACG00000014002) #15	FRYL (ENSLACG00000011439) #17	ZAR1 (ENSLACG00000011230) #18	SLAIN2 (ENSLACG00000009763) #21	TEC (ENSLACG00000005869) #22	TXK (ENSLACG00000002886) #24	ENSLACG00000000510 #25
Actinopterygii	ANCESTRAL SPECIES	82	ENSGT00940000164705	ENSGT00530000063371.C	ENSGT00940000157061.b	ENSGT00940000165836	ENSGT00940000158095	ENSGT00940000160001	ENSGT00940000156944	ENSGT00950000182934.b	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139	ENSGT00950000185681	ENSGT00940000159349	ENSGT00940000159591	ENSGT00390000002292.b	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000154713.B	ENSGT00940000159491	ENSGT00940000159531	ENSGT00940000154245.A ##32	ENSGT00940000159024 #33	ENSGT00940000157266.b #35	ENSGT00940000157266.a #35
Reedfish	MODERN SPECIES	13	ENSECRG00000003947	WFS1 (ENSECRG00000000949)	ppp2r2ca (ENSECRG00000001116)	MAN2B2 (ENSECRG00000001421)	S100P (ENSECRG00000001461)	kiaa0232 (ENSECRG00000001480)	TBC1D14 (ENSECRG00000001527)	ENSECRG00000001572	ccdc96 (ENSECRG00000001586)	tada2b (ENSECRG00000001599)	grpel1 (ENSECRG00000001615)	ENSECRG00000001624	SORCS2 (ENSECRG00000001726)	AFAP1 (ENSECRG00000001962)	ABLIM2 (ENSECRG00000002064)	tec (ENSECRG00000002195) #22	ENSECRG00000002231 #24	ENSECRG00000002250	NIPAL1 (ENSECRG00000002259) #25	cnga1a (ENSECRG00000002287) #26	NFXL1 (ENSECRG00000002324) #27	CORIN (ENSECRG00000002380) #29	atp10d (ENSECRG00000002470) #30	commd8 (ENSECRG00000002491) #31	ENSECRG00000002533	ENSECRG00000002589 ##32	GABRA4 (ENSECRG00000002606) #33	ENSECRG00000002665 #35	GABRG1 (ENSECRG00000002825) #37	GUF1 (ENSECRG00000003129)	GNPDA2 (ENSECRG00000003182)
Neopterygii	ANCESTRAL SPECIES	419																ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29
Osteoglossocephalai	ANCESTRAL SPECIES	333												ENSGT00940000156074.a.a #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000177950	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00940000154706.rb.a	ENSGT00950000182917.a.a.a.a
Osteoglossiformes	ANCESTRAL SPECIES	148											ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000160368	ENSGT00390000011365.b.l	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000155598.d	ENSGT00950000182907.a.b.b.a.b	ENSGT00940000154737.d.e	ENSGT01060000248998	ENSGT01030000235336	ENSGT00950000182917.a.a.a.a	ENSGT00940000157887.p	ENSGT00930000151042	ENSGT00940000155140	ENSGT00940000159660.g	ENSGT00940000157714	ENSGT00940000157370.a	ENSGT00940000164073.b.a	ENSGT00530000069080	ENSGT00940000154950.y.b
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	234	sgms2b (ENSPKIG00000012734)	cyp2u1 (ENSPKIG00000012757)	LEF1 (ENSPKIG00000012779)	znf330 (ENSPKIG00000012819)	RNF150 (ENSPKIG00000012850)	TBC1D9 (ENSPKIG00000012912)	ENSPKIG00000013137	ENSPKIG00000013148	ENSPKIG00000013165	PPM1K (ENSPKIG00000013197)	abcg2a (ENSPKIG00000013249)	G3BP2 (ENSPKIG00000013310)	ENSPKIG00000013396 ##22	ENSPKIG00000013423 #22	ENSPKIG00000013442	ENSPKIG00000013456 #22	CORO2A (ENSPKIG00000013483)	ENSPKIG00000013513	ENSPKIG00000013551	ENSPKIG00000013567	ENSPKIG00000013576	ENSPKIG00000013598	TTC39B (ENSPKIG00000013623)	dnajb14 (ENSPKIG00000013657)	ENSPKIG00000013679	casp6a (ENSPKIG00000013707)	ENSPKIG00000013733	FHDC1 (ENSPKIG00000013771)	FBXW7 (ENSPKIG00000013805)	ENSPKIG00000013847	FHIP1A (ENSPKIG00000013879)
P. kingsleyae	MODERN SPECIES	234	GIMD1 (ENSPKIG00000012707)	ENSPKIG00000012720	sgms2b (ENSPKIG00000012734)	cyp2u1 (ENSPKIG00000012757)	LEF1 (ENSPKIG00000012779)	znf330 (ENSPKIG00000012819)	RNF150 (ENSPKIG00000012850)	TBC1D9 (ENSPKIG00000012912)	ENSPKIG00000013137	ENSPKIG00000013148	ENSPKIG00000013165	PPM1K (ENSPKIG00000013197)	abcg2a (ENSPKIG00000013249)	G3BP2 (ENSPKIG00000013310)	ENSPKIG00000013396 ##22	ENSPKIG00000013423 #22	ENSPKIG00000013442	ENSPKIG00000013456 #22	CORO2A (ENSPKIG00000013483)	ENSPKIG00000013513	ENSPKIG00000013551	ENSPKIG00000013567	ENSPKIG00000013576	ENSPKIG00000013598	TTC39B (ENSPKIG00000013623)	dnajb14 (ENSPKIG00000013657)	ENSPKIG00000013679	casp6a (ENSPKIG00000013707)	ENSPKIG00000013733	FHDC1 (ENSPKIG00000013771)	FBXW7 (ENSPKIG00000013805)
Asian bonytongue	MODERN SPECIES	18	SMARCA5 (ENSSFOG00015013252)	GAB1 (ENSSFOG00015013326)	INPP4B (ENSSFOG00015013349)	RNF150 (ENSSFOG00015013385)	TBC1D9 (ENSSFOG00015013420)	ENSSFOG00015026393	ucp1 (ENSSFOG00015013477)	ENSSFOG00015025504	ENSSFOG00015013544	ENSSFOG00015013565	PPM1K (ENSSFOG00015027104)	abcg2a (ENSSFOG00015013635)	CDKL2 (ENSSFOG00015013655)	G3BP2 (ENSSFOG00015013690)	ENSSFOG00015013782 ##22	tec (ENSSFOG00015013833) #22	CORO2A (ENSSFOG00015013929)	anp32b (ENSSFOG00015032852)	ENSSFOG00015013986	bnc2 (ENSSFOG00015014026)	ENSSFOG00015014057	PSIP1 (ENSSFOG00015014102)	TTC39B (ENSSFOG00015014125)	dnajb14 (ENSSFOG00015014183)	ENSSFOG00015014238	CASP6 (ENSSFOG00015029815)	ENSSFOG00015014418	LEF1 (ENSSFOG00015014526)	cyp2u1 (ENSSFOG00015014549)	sgms2b (ENSSFOG00015031933)	ENSSFOG00015014602
Clupeocephala	ANCESTRAL SPECIES	201					ENSGT00940000156074.a.a #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000153745.b.f	ENSGT00390000013285.h	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000160368	ENSGT00390000011365.b	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000177950	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00940000154706.rb.a	ENSGT00950000182917.a.a.a.a	ENSGT00930000151042	ENSGT00940000158059.h	ENSGT00940000157370.a	ENSGT00940000164073.b	ENSGT00940000154950.y.b	ENSGT00930000150973.B.e.a	ENSGT00940000154108.b.a.b	ENSGT00940000153173.a	ENSGT00530000064170.d
Otomorpha	ANCESTRAL SPECIES	149	ENSGT00940000157956.o.a	ENSGT00900000142261	ENSGT00940000153993.A.i	ENSGT00560000077278.a	ENSGT00940000164913	ENSGT00940000153299.b	ENSGT00390000011553	ENSGT01030000234598.a.a.b	ENSGT00940000156074.a.a #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00390000013285.h	ENSGT00940000160368	ENSGT00390000011365.b.w.b	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000155598.b.m.b	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00940000154706.rb.a	ENSGT00950000182917.a.a.a.a	ENSGT00930000151042	ENSGT00940000158059.h	ENSGT00940000157370.a	ENSGT00940000164073.b	ENSGT00940000154950.y.b	ENSGT00930000150973.B.e.a	ENSGT00940000154108.b.a.b	ENSGT00940000153173.a	ENSGT00530000064170.d
Otophysi	ANCESTRAL SPECIES	164				ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000153299.b	ENSGT00390000011553	ENSGT01030000234598.a.a.b	ENSGT00940000156074.a.a #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00390000013285.h	ENSGT00940000160368	ENSGT00390000011365.b.w.b	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000155598.b.m.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000167699	ENSGT00940000154706.rb.a	ENSGT00950000182917.a.a.a.a	ENSGT00930000151042.w	ENSGT00940000157370.a	ENSGT00940000164073.b	ENSGT00940000154950.y.b	ENSGT00930000150973.B.e.a	ENSGT00940000154108.b.a.b	ENSGT00940000153173.a	ENSGT00530000064170.d	ENSGT00940000163785.a.a.a
Characiphysae	ANCESTRAL SPECIES	160				ENSGT00940000154737.d.i	ENSGT00950000182907.a.b.a	ENSGT00940000154466.bc	ENSGT00390000011553	ENSGT01030000234598.a.a.b	ENSGT00940000156074.a.a #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00390000013285.h	ENSGT00940000160368	ENSGT00390000011365.b.w.b	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000155598.b.n	ENSGT00940000164913	ENSGT00560000077278.a	ENSGT00940000153993.A.i	ENSGT00980000199088	ENSGT00940000157956.o.a	ENSGT00940000160057	ENSGT00940000167331.b	ENSGT00610000086191	ENSGT01030000234582.e.a	ENSGT01030000235000	ENSGT00940000167671	ENSGT01100000263484.C.b.b	ENSGT00940000160105	ENSGT00940000162467.a.b
Characiphysae_b	DUPLICATION
Characiphysae_b	ANCESTRAL SPECIES	177											ENSGT00940000157103 #29	ENSGT00390000013285.h	ENSGT00940000160368	ENSGT00390000011365.b.w.b	ENSGT00940000155951.a ##22	ENSGT00940000155951.b.v #22	ENSGT00940000155598.b.n	ENSGT00940000164913	ENSGT00560000077278.a	ENSGT00940000153993.A.i	ENSGT00980000199088	ENSGT00940000157956.o.a	ENSGT00940000160057	ENSGT00940000167331.b	ENSGT00610000086191	ENSGT01030000234582.e.a	ENSGT01030000235000	ENSGT00940000167671	ENSGT01100000263484.C.b.b	ENSGT00940000160105	ENSGT00940000162467.a.b
Characoidei	ANCESTRAL SPECIES	274									ENSGT00940000156074.a.a #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00390000013285.h	ENSGT00940000160368	ENSGT00390000011365.b.w.b	ENSGT00940000155951.a ##22	ENSGT00940000155951.b.v #22	ENSGT00940000155598.b.n	ENSGT00940000164913	ENSGT00560000077278.a	ENSGT00940000153993.A.i	ENSGT00980000199088	ENSGT00940000157956.o.a	ENSGT00940000160057
Red-bellied piranha	MODERN SPECIES	1976															ENSPNAG00000025460	tec (ENSPNAG00000025552) #22	ENSPNAG00000025664
Mexicana tetra	MODERN SPECIES	6	PLEKHG1 (ENSAMXG00000010782)	ENSAMXG00000010740	ENSAMXG00000031802	ENSAMXG00000005148	ENSAMXG00000035322	ENSAMXG00000038049	ENSAMXG00000034579	ENSAMXG00000037466	NFXL1 (ENSAMXG00000004309) #27	CORIN (ENSAMXG00000004363) #29	ENSAMXG00000004397	ENSAMXG00000004426	CDKL2 (ENSAMXG00000004449)	g3bp2b (ENSAMXG00000004459)	ENSAMXG00000019769 ##22	tec (ENSAMXG00000019793) #22	CORO2A (ENSAMXG00000019819)	zgc:158659 (ENSAMXG00000019848)	ENSAMXG00000019882	MEPCE (ENSAMXG00000033849)	ENSAMXG00000032779	ENSAMXG00000033128	ENSAMXG00000029852	ENSAMXG00000037673	DLG4 (ENSAMXG00000030496)	ephb4b (ENSAMXG00000019985)	ENSAMXG00000031401	eif4e2rs1 (ENSAMXG00000019996)	ENSAMXG00000020010	ENSAMXG00000020013	ENSAMXG00000020026
Electric eel	MODERN SPECIES	1476																tec (ENSEEEG00000007361) #22	CORO2A (ENSEEEG00000007326)	ENSEEEG00000007314
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00940000155951.b.w #22
Electric eel	MODERN SPECIES	511													CDKL2 (ENSEEEG00000006115)	g3bp2b (ENSEEEG00000006111)	ENSEEEG00000006105 ##22	ENSEEEG00000006102 #22	ENSEEEG00000006098	eef1a1b (ENSEEEG00000005554)	ENSEEEG00000005483	itga6b (ENSEEEG00000005240)	dlx2b (ENSEEEG00000005219)	metap1d (ENSEEEG00000005216)	DIS3 (ENSEEEG00000005181)	bora (ENSEEEG00000005169)	mzt1 (ENSEEEG00000005168)	dachc (ENSEEEG00000005165)	gpr183b (ENSEEEG00000005163)	ubac2 (ENSEEEG00000005160)	ENSEEEG00000005158	ENSEEEG00000005155	ENSEEEG00000005152
Characoidei	ANCESTRAL SPECIES																	ENSGT00940000155951.b.w #22
Red-bellied piranha	MODERN SPECIES	1954																ENSPNAG00000004253 #22
Channel catfish	MODERN SPECIES	6	ENSIPUG00000003853	ENSIPUG00000003836	ENSIPUG00000003824	HMGB2 (ENSIPUG00000003812)	ctc1 (ENSIPUG00000003776)	tfr2 (ENSIPUG00000003730)	ENSIPUG00000003719	ENSIPUG00000003703 #27	CNGA1 (ENSIPUG00000003687) #26	ENSIPUG00000003676 #27	CORIN (ENSIPUG00000003632) #29	ENSIPUG00000003611	ENSIPUG00000003594	g3bp2 (ENSIPUG00000003561)	ENSIPUG00000003538 ##22	tec (ENSIPUG00000003515) #22	ENSIPUG00000003441	zgc:158659 (ENSIPUG00000003405)	MEPCE (ENSIPUG00000003387)	ENSIPUG00000003374	ENSIPUG00000003363	ENSIPUG00000003339	cfi (ENSIPUG00000003259)	sgms2b (ENSIPUG00000003241)	ENSIPUG00000003218	AIMP1 (ENSIPUG00000003203)	ENSIPUG00000003183	ENSIPUG00000003179	ddx58 (ENSIPUG00000003114)	ENSIPUG00000003098	ENSIPUG00000002950
Cyprinoidei	ANCESTRAL SPECIES	171									ENSGT00940000156074.a.a #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00390000013285.h	ENSGT00940000160368	ENSGT00390000011365.b.w.b	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000155598.b.n	ENSGT00940000164913	ENSGT00940000153993.A.i	ENSGT00900000142261	ENSGT00940000157956.o.a	ENSGT00940000160057	ENSGT00940000167331.b	ENSGT00610000086191	ENSGT01030000234629.A	ENSGT00940000160860
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	735								ENSGT00940000156074.a.a.b #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000155512.h	ENSGT00390000013285.h	ENSGT00940000160368	ENSGT00390000011365.b.w.b.a	ENSGT00940000155951.a.b ##22	ENSGT00940000155951.b.x.a.a #22	ENSGT00940000155598.b.n	ENSGT00940000153993.A.i.c.a
Goldfish	MODERN SPECIES	42	tfr2 (ENSCARG00000018584)	ctc1 (ENSCARG00000018571)	ENSCARG00000018568	ENSCARG00000018538	ENSCARG00000018527	ENSCARG00000018517	ENSCARG00000018231	ENSCARG00000018208	ENSCARG00000018179	sgms2b (ENSCARG00000018166)	aimp1b (ENSCARG00000047730)	CORIN (ENSCARG00000047657) #29	ENSCARG00000047510	g3bp2b (ENSCARG00000047407)	ENSCARG00000047154 ##22	tec (ENSCARG00000046631) #22	ENSCARG00000046556	MEPCE (ENSCARG00000046539)	ENSCARG00000046525	ENSCARG00000046517	ENSCARG00000046473	actl6b (ENSCARG00000046153)	ENSCARG00000045204	psmb6 (ENSCARG00000045178)	trappc1 (ENSCARG00000045162)	pfn1 (ENSCARG00000045144)	ENO3 (ENSCARG00000044870)	ENSCARG00000044836	zgc:85858 (ENSCARG00000044826)	CAMTA2 (ENSCARG00000044795)	ENSCARG00000044784
Cyprininae_a	ANCESTRAL SPECIES	572								ENSGT00940000156074.a.a.b #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000155512.h	ENSGT00390000013285.h	ENSGT00940000160368	ENSGT00390000011365.b.w.b.a	ENSGT00940000155951.a.b ##22	ENSGT00940000155951.b.x.a.a #22	ENSGT00940000155598.b.n	ENSGT00940000153993.A.i.c.a
Common carp reference	MODERN SPECIES	11						ENSCCRG00000041278	CNGA1 (ENSCCRG00000005635) #26	ENSCCRG00000005645 #27	CORIN (ENSCCRG00000019141) #29	ENSCCRG00000070630	ENSCCRG00000068001	ENSCCRG00000070530	ENSCCRG00000054677	ENSCCRG00000059118	ENSCCRG00000028570 ##22	tec (ENSCCRG00000058209) #22	ENSCCRG00000011271	ENSCCRG00000016846	ENSCCRG00000074182	ENSCCRG00000065258	ENSCCRG00000061617	ephb4b (ENSCCRG00000058750)	eif4e2rs1 (ENSCCRG00000065091)	ENSCCRG00000071706	actl6b (ENSCCRG00000011109)	ENSCCRG00000074993	psmb6 (ENSCCRG00000044556)	ENSCCRG00000064074	pfn1 (ENSCCRG00000065450)	eno3 (ENSCCRG00000058869)	ENSCCRG00000000693
Cyprininae	ANCESTRAL SPECIES	592																ENSGT00940000155951.b.x.a.b #22	ENSGT00940000164913	ENSGT00940000153993.A.i.c.b	ENSGT00940000157956.o.a	ENSGT00940000160057	ENSGT00940000167331.b	ENSGT00610000086191	ENSGT01030000234629.A	ENSGT00940000160860	ENSGT00940000159295.nb.b.a	ENSGT00940000155114.d.a.b	ENSGT00940000155114.d.a.a	ENSGT00940000153761.A	ENSGT00940000153664.A.a	ENSGT00950000182805.a.a.b.b.db.b	ENSGT00990000204670.b
Cyprininae_a	ANCESTRAL SPECIES	433																ENSGT00940000155951.b.x.a.b #22	ENSGT00940000164913	ENSGT00940000153993.A.i.c.b	ENSGT00940000157956.o.a	ENSGT00940000160057	ENSGT00940000167331.b	ENSGT00610000086191	ENSGT01030000234629.A	ENSGT00940000160860	ENSGT00940000159295.nb.b.a	ENSGT00940000155114.d.a.a	ENSGT00940000153761.A	ENSGT00940000153664.A.a	ENSGT00950000182805.a.a.b.b.db.b	ENSGT00990000204670.b	ENSGT00940000180422
Common carp reference	MODERN SPECIES	49												ENSCCRG00000027839 #26	ENSCCRG00000027076	ENSCCRG00000082681 ##22	ENSCCRG00000060952	tec (ENSCCRG00000070107) #22	zgc:158659 (ENSCCRG00000063854)	ENSCCRG00000048682	ENSCCRG00000060917	ephb4b (ENSCCRG00000067099)	eif4e2rs1 (ENSCCRG00000074656)	ENSCCRG00000024958	ENSCCRG00000011683	ENSCCRG00000078406	psmb6 (ENSCCRG00000040903)	trappc1 (ENSCCRG00000060407)	ENSCCRG00000059668	ENSCCRG00000064331	ENSCCRG00000068791	ENSCCRG00000070167	ENSCCRG00000075808
Goldfish	MODERN SPECIES	15	ENSCARG00000012963	ENSCARG00000012957	zgc:55733 (ENSCARG00000012925)	ENSCARG00000012916	ndrg2 (ENSCARG00000011140)	ENSCARG00000011090	ENSCARG00000011088	ENSCARG00000011085	si:ch73-359m17.2 (ENSCARG00000011051)	ENSCARG00000011036	ENSCARG00000011022	CNGA1 (ENSCARG00000011010) #26	ENSCARG00000011003	g3bp2b (ENSCARG00000010997)	ENSCARG00000010992	tec (ENSCARG00000009608) #22	zgc:158659 (ENSCARG00000009455)	MEPCE (ENSCARG00000009422)	ENSCARG00000009412	ENSCARG00000009393	HMGB2 (ENSCARG00000009379)	ENSCARG00000009357	ENSCARG00000009344	ENSCARG00000009326	ENSCARG00000009302	ENSCARG00000009256	ENSCARG00000008941	ENSCARG00000008916	ENSCARG00000008830	ENSCARG00000008751	sgms2b (ENSCARG00000008728)
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000155951.b.x.b #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000155951.b.x.b #22
Golden-line barbel	MODERN SPECIES	2051												ENSSGRG00000009437	ENSSGRG00000009440 ##22	ENSSGRG00000009444 ##22	ENSSGRG00000009446 #22	ENSSGRG00000009455 #22	MEPCE (ENSSGRG00000009576)
Cyprininae	ANCESTRAL SPECIES	1241																ENSGT00940000155951.b.y #22	ENSGT00940000155951.a.a ##22	ENSGT00390000011365.b.w.b.b
Cyprininae_a	ANCESTRAL SPECIES	912																ENSGT00940000155951.b.y #22	ENSGT00940000155951.a.a ##22	ENSGT00390000011365.b.w.b.b
Golden-line barbel	MODERN SPECIES	2051														MEPCE (ENSSGRG00000009576)	ENSSGRG00000009455 #22	ENSSGRG00000009446 #22	ENSSGRG00000009444 ##22	ENSSGRG00000009440 ##22	ENSSGRG00000009437
Zebrafish	MODERN SPECIES	15	slc10a7 (ENSDARG00000104508)	otud4 (ENSDARG00000077810)	abce1 (ENSDARG00000007216)	anapc10 (ENSDARG00000090152)	ENSDARG00000054548	rnf150b (ENSDARG00000009524)	ENSDARG00000088882	PPM1K (ENSDARG00000076011)	ENSDARG00000095911	CNGA1 (ENSDARG00000012125) #26	NFXL1 (ENSDARG00000070127) #27	CORIN (ENSDARG00000101281) #29	ENSDARG00000043918	ENSDARG00000015068 ##22	g3bp2b (ENSDARG00000074572)	tec (ENSDARG00000098477) #22	ENSDARG00000095969	zgc:158659 (ENSDARG00000060597)	MEPCE (ENSDARG00000035771)	ENSDARG00000095809	DLG4 (ENSDARG00000039385)	ephb4b (ENSDARG00000027112)	eif4e2rs1 (ENSDARG00000015835)	ENSDARG00000095799	SPSB2 (ENSDARG00000088985)	actl6b (ENSDARG00000034107)	ENSDARG00000075024	psmb6 (ENSDARG00000002240)	trappc1 (ENSDARG00000039005)	ENSDARG00000087392	ENSDARG00000099607
Clupeiformes	ANCESTRAL SPECIES	267			ENSGT00940000153993.A.i	ENSGT00560000077278.a	ENSGT00940000164913	ENSGT00940000154466.bc	ENSGT00390000011553	ENSGT01030000234598.a.a.b	ENSGT00940000156074.a.a #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00390000013285.h	ENSGT00940000160368	ENSGT00390000011365.b.w.b	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000155598.b.m.a	ENSGT00950000182917.a.a.a.a	ENSGT00930000151042	ENSGT00940000158059.h	ENSGT00940000157370.a	ENSGT00990000205111	ENSGT00940000154950.y.b	ENSGT00930000150973.B.e.a
Atlantic herring	MODERN SPECIES	9	ENSCHAG00000014360	MEPCE (ENSCHAG00000014353)	ENSCHAG00000014343	zgc:158659 (ENSCHAG00000014231)	HMGB2 (ENSCHAG00000014204)	ctc1 (ENSCHAG00000014178)	tfr2 (ENSCHAG00000014039)	CNGA1 (ENSCHAG00000014018) #26	ENSCHAG00000013139 #27	CORIN (ENSCHAG00000011548) #29	ENSCHAG00000011038	ENSCHAG00000009896	ENSCHAG00000009658	g3bp2b (ENSCHAG00000009636)	ENSCHAG00000009348 ##22	ENSCHAG00000008610 #22	ENSCHAG00000008509	ENSCHAG00000008321	ENSCHAG00000008302	ENSCHAG00000008237	ENSCHAG00000008280	ENSCHAG00000008284	ENSCHAG00000008213	ENSCHAG00000007650	ENSCHAG00000007625	ENSCHAG00000007475	ENSCHAG00000007461	sgms2b (ENSCHAG00000007453)	ENSCHAG00000007420	aimp1b (ENSCHAG00000007267)	ENSCHAG00000007242
Denticle herring	MODERN SPECIES		slc12a9 (ENSDCDG00000017263)	eif4e2rs1 (ENSDCDG00000017269)	ENSDCDG00000017274	actl6b (ENSDCDG00000017283)	KIF1C (ENSDCDG00000017321)	psmb6 (ENSDCDG00000019417)	trappc1 (ENSDCDG00000019420)	KCNAB3 (ENSDCDG00000019435)	MEPCE (ENSDCDG00000019529)	zgc:158659 (ENSDCDG00000019538)	HMGB2 (ENSDCDG00000019550)	ctc1 (ENSDCDG00000019558)	tfr2 (ENSDCDG00000019567)	ENSDCDG00000019595	ENSDCDG00000019872 ##22	tec (ENSDCDG00000019913) #22	ENSDCDG00000020010	ENSDCDG00000020014	ENSDCDG00000020017	ENSDCDG00000000145	ENSDCDG00000000152	ENSDCDG00000000161	ENSDCDG00000000386	ENSDCDG00000000608	sgms2b (ENSDCDG00000000613)	ENSDCDG00000000617	ENSDCDG00000000622	zgc:172075 (ENSDCDG00000000628)	ENSDCDG00000000631	ENSDCDG00000000636	ENSDCDG00000000640
Euteleosteomorpha	ANCESTRAL SPECIES	156	ENSGT00390000008611	ENSGT00390000011932	ENSGT00940000163277	ENSGT00940000159922.a.b	ENSGT00390000013722	ENSGT00940000162501	ENSGT00940000156733	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000160368	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000155905.b	ENSGT00940000156323.c.b	ENSGT00390000013075.b	ENSGT00940000158122	ENSGT00940000157467	ENSGT00390000011679	ENSGT00510000047351.b	ENSGT00940000165274.a	ENSGT00940000155927	ENSGT00940000155973.b.c
Protacanthopterygii	ANCESTRAL SPECIES	139	ENSGT00390000008611	ENSGT00390000011932	ENSGT00940000156063.l	ENSGT00940000159922.a.b	ENSGT00390000013722	ENSGT00940000162501.c.b	ENSGT00940000156801.g	ENSGT00940000157587.l.b	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000160368	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000160529
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000155951.b.z.a.a #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000155951.b.z.a.a #22
Oncorhynchus	ANCESTRAL SPECIES	97	ENSGT00940000155694.h.c	ENSGT00940000154895.a.a	ENSGT01100000263512.a.a.b.a	ENSGT00390000008611	ENSGT00390000011932	ENSGT00940000156063.l	ENSGT00940000154391.a.a.f	ENSGT00940000159922.a.b	ENSGT00390000013722	ENSGT00940000156801.g	ENSGT00940000157587.l.b	ENSGT00940000156171.h.p.b	ENSGT00390000004396.h	ENSGT00940000156633.d.b	ENSGT00940000166038.f.b.b	ENSGT00940000155951.b.z.a.a #22	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a.b.b.a	ENSGT00950000182907.a.b.a.b.a	ENSGT00940000154737.d.p.c.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	485																ENSGT00940000155951.b.z.a.a #22	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a.b.b.a
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES		ENSOTSG00005029102	ENSOTSG00005029093	ENSOTSG00005029089	ENSOTSG00005029087	pcgf5a (ENSOTSG00005029077)	ENSOTSG00005029072	ENSOTSG00005029070	ENSOTSG00005029069	epas1b (ENSOTSG00005026875)	ENSOTSG00005026866	ENSOTSG00005026863	six2a (ENSOTSG00005026862)	six3a (ENSOTSG00005026860)	dync2li1 (ENSOTSG00005026848)	ENSOTSG00005026838	tec (ENSOTSG00005026834) #22	CORO2A (ENSOTSG00005026832)	ENSOTSG00005026831	galnt2 (ENSOTSG00005026006)	urb2 (ENSOTSG00005026004)	ABCB10 (ENSOTSG00005026002)	acta1b (ENSOTSG00005025999)	rab4a (ENSOTSG00005025996)	rhoua (ENSOTSG00005025993)	pdcd2 (ENSOTSG00005025992)	tbp (ENSOTSG00005025991)	psmb1 (ENSOTSG00005025990)	phf10 (ENSOTSG00005025980)	dld (ENSOTSG00005025979)	ppm1g (ENSOTSG00005025976)	ENSOTSG00005025975
Chinook salmon	MODERN SPECIES	1236															b3gnt2b (ENSOTSG00005025298)	tec (ENSOTSG00005025299) #22	ENSOTSG00005025300
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000017020	ENSOMYG00000017093	ENSOMYG00000017115	ENSOMYG00000055930	rnf150b (ENSOMYG00000058101)	ENSOMYG00000077105	ENSOMYG00000059672	ENSOMYG00000066673	ENSOMYG00000056196	ENSOMYG00000055949	ENSOMYG00000017296	ENSOMYG00000017304	ENSOMYG00000069009	ENSOMYG00000049954	ENSOMYG00000049287	ENSOMYG00000061770 #22	ENSOMYG00000075423	ENSOMYG00000017269	ENSOMYG00000050628	ENSOMYG00000076550	ENSOMYG00000017263	ENSOMYG00000017241	ENSOMYG00000075472	opi-2 (ENSOMYG00000017204)	fgb (ENSOMYG00000017143)	fga (ENSOMYG00000053733)	ENSOMYG00000066247	ENSOMYG00000060032	ENSOMYG00000001678	ENSOMYG00000073644	ENSOMYG00000058665
Huchen	MODERN SPECIES	2380															ENSHHUG00000052719	ENSHHUG00000052718 #22	ENSHHUG00000052717
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000155951.b.z.a.b #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000155951.b.z.a.b #22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00940000155951.b.z.a.b #22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00940000155951.b.z.a.b #22
Coho salmon	DUPLICATION
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	7	ENSOKIG00005015637	ENSOKIG00005015630	ENSOKIG00005015609	ENSOKIG00005015562	ENSOKIG00005015497	ENSOKIG00005015468	ENSOKIG00005015433	fgb (ENSOKIG00005015331)	ENSOKIG00005015292	rnf150b (ENSOKIG00005015265)	ENSOKIG00005015207	ENSOKIG00005015198	PPM1K (ENSOKIG00005015191)	ENSOKIG00005014940	ENSOKIG00005014882	ENSOKIG00005014868 #22	ENSOKIG00005014864 #22	ENSOKIG00005014841 #22	ENSOKIG00005014831	DCLK2 (ENSOKIG00005014457)	ednrab (ENSOKIG00005013865)	TTC29 (ENSOKIG00005013816)	slc10a7 (ENSOKIG00005013797)	ENSOKIG00005013775	ENSOKIG00005013764	ENSOKIG00005013725	anapc10 (ENSOKIG00005013696)	ENSOKIG00005013680	ENSOKIG00005013668	ENSOKIG00005013658	ENSOKIG00005013619
Coho salmon	MODERN SPECIES	7	ENSOKIG00005015609	ENSOKIG00005015562	ENSOKIG00005015497	ENSOKIG00005015468	ENSOKIG00005015433	fgb (ENSOKIG00005015331)	ENSOKIG00005015292	rnf150b (ENSOKIG00005015265)	ENSOKIG00005015207	ENSOKIG00005015198	PPM1K (ENSOKIG00005015191)	ENSOKIG00005014940	ENSOKIG00005014882	ENSOKIG00005014868 #22	ENSOKIG00005014864 #22	ENSOKIG00005014841 #22	ENSOKIG00005014831	DCLK2 (ENSOKIG00005014457)	ednrab (ENSOKIG00005013865)	TTC29 (ENSOKIG00005013816)	slc10a7 (ENSOKIG00005013797)	ENSOKIG00005013775	ENSOKIG00005013764	ENSOKIG00005013725	anapc10 (ENSOKIG00005013696)	ENSOKIG00005013680	ENSOKIG00005013668	ENSOKIG00005013658	ENSOKIG00005013619	ENSOKIG00005013594	ENSOKIG00005013584
Coho salmon	MODERN SPECIES	7	ENSOKIG00005015630	ENSOKIG00005015609	ENSOKIG00005015562	ENSOKIG00005015497	ENSOKIG00005015468	ENSOKIG00005015433	fgb (ENSOKIG00005015331)	ENSOKIG00005015292	rnf150b (ENSOKIG00005015265)	ENSOKIG00005015207	ENSOKIG00005015198	PPM1K (ENSOKIG00005015191)	ENSOKIG00005014940	ENSOKIG00005014882	ENSOKIG00005014868 #22	ENSOKIG00005014864 #22	ENSOKIG00005014841 #22	ENSOKIG00005014831	DCLK2 (ENSOKIG00005014457)	ednrab (ENSOKIG00005013865)	TTC29 (ENSOKIG00005013816)	slc10a7 (ENSOKIG00005013797)	ENSOKIG00005013775	ENSOKIG00005013764	ENSOKIG00005013725	anapc10 (ENSOKIG00005013696)	ENSOKIG00005013680	ENSOKIG00005013668	ENSOKIG00005013658	ENSOKIG00005013619	ENSOKIG00005013594
Huchen	DUPLICATION
Huchen	MODERN SPECIES	4370																tec (ENSHHUG00000039270) #22	ENSHHUG00000039265	ENSHHUG00000039262	ENSHHUG00000039255
Huchen	MODERN SPECIES	8934																TEC (ENSHHUG00000002077) #22
Salmoninae	ANCESTRAL SPECIES	314	ENSGT00940000180552	ENSGT00940000154895.a.a	ENSGT01100000263512.a.a.b.a	ENSGT00390000008611	ENSGT00390000011932	ENSGT00940000156063.l	ENSGT00940000159922.a.b	ENSGT00390000013722	ENSGT00940000156801.g	ENSGT00940000157587.l.b	ENSGT00940000156171.h.p.b	ENSGT00390000004396.h	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038.f.b.b	ENSGT00940000155951.b.z.b #22	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a.b.b.b	ENSGT00940000154737.d.p	ENSGT00440000034932.a	ENSGT00390000005844.a.b.o
Salmoninae_a	ANCESTRAL SPECIES	223														ENSGT00940000166038.e	ENSGT00940000160368	ENSGT00940000155951.b.z.b #22	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a.b.b.a	ENSGT00950000182907.a.b.a.b.b.b	ENSGT00940000154737.d.p.c.a.a
Salmo	ANCESTRAL SPECIES	167	ENSGT01100000263512.a.a.b.a	ENSGT00390000008611	ENSGT00390000011932	ENSGT00940000156063.l	ENSGT00940000159922.a.b	ENSGT00390000013722	ENSGT00940000156801.g	ENSGT00940000157587.l.b	ENSGT00940000156171.h.p.b	ENSGT00390000004396.h	ENSGT00570000079168.b.b.b.x	ENSGT00940000156633.d.b	ENSGT00940000166038.f.a	ENSGT00940000166038.e	ENSGT00940000160368	ENSGT00940000155951.b.z.b #22	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a.b.b.b	ENSGT00940000154737.d.p.c.a.a
Atlantic salmon	MODERN SPECIES	176	SLC10A7 (ENSSSAG00000045022)	ENSSSAG00000044660	smad1 (ENSSSAG00000044703)	ENSSSAG00000100681	anapc10 (ENSSSAG00000112756)	ENSSSAG00000081851	ENSSSAG00000044437	ENSSSAG00000101673	ENSSSAG00000059157	ENSSSAG00000044618	ENSSSAG00000044632	ENSSSAG00000091474	ENSSSAG00000119040	ENSSSAG00000041887	ENSSSAG00000103115	ENSSSAG00000114580 #22	ENSSSAG00000042977	ENSSSAG00000117820	ENSSSAG00000111754	ENSSSAG00000116359	ENSSSAG00000062196	ENSSSAG00000102209
River trout	MODERN SPECIES	35	ENSSTUG00000001170	ENSSTUG00000001161	ENSSTUG00000001154	ENSSTUG00000001140	slc10a7 (ENSSTUG00000001129)	smad1 (ENSSTUG00000001091)	anapc10 (ENSSTUG00000001055)	ENSSTUG00000001044	rnf150b (ENSSTUG00000001037)	ENSSTUG00000001027	ENSSTUG00000001020	PPM1K (ENSSTUG00000001014)	abcg2a (ENSSTUG00000000848)	abcg2a (ENSSTUG00000000802)	ENSSTUG00000000792	tec (ENSSTUG00000000587) #22	CORO2A (ENSSTUG00000000483)	ENSSTUG00000000475	ENSSTUG00000000455	ENSSTUG00000000443	ENSSTUG00000000427	snx15 (ENSSTUG00000000417)	prox3 (ENSSTUG00000000409)	tmem179ba (ENSSTUG00000000396)	ENSSTUG00000007092	ENSSTUG00000007082	ENSSTUG00000007076	ENSSTUG00000007070	ENSSTUG00000007067	ENSSTUG00000007053	ENSSTUG00000007011
Salmoninae	ANCESTRAL SPECIES	1601															ENSGT00940000155951.a ##22	ENSGT00940000155951.b.`b #22
Salmoninae_a	ANCESTRAL SPECIES	148										ENSGT00930000151815	ENSGT00940000155201.d	ENSGT00940000163277	ENSGT00940000162501.c.b	ENSGT00940000156171.h.p.a	ENSGT00940000155951.a ##22	ENSGT00940000155951.b.`b #22	ENSGT00950000182907.a.b.a.a	ENSGT00940000155905.b.k	ENSGT00940000156323.c.b	ENSGT00390000013075.b	ENSGT00940000158122.j	ENSGT00940000157467.z	ENSGT00390000011679	ENSGT00510000047351.b.s	ENSGT00940000155973.b.c.d.a	ENSGT00940000164842	ENSGT00390000003680.a.a.b	ENSGT01060000248840.b.a.b	ENSGT00800000124060.A.a.f	ENSGT00390000005739.a.a.q	ENSGT00390000015415
Salmo	ANCESTRAL SPECIES	140										ENSGT00930000151815	ENSGT00940000155201.d	ENSGT00940000163277	ENSGT00940000162501.c.b	ENSGT00940000156171.h.p.a	ENSGT00940000155951.a ##22	ENSGT00940000155951.b.`b #22	ENSGT00950000182907.a.b.a.a	ENSGT00940000155905.b.k	ENSGT00940000156323.c.b	ENSGT00390000013075.b	ENSGT00940000158122.j	ENSGT00940000157467.z	ENSGT00390000011679	ENSGT00510000047351.b.s	ENSGT00940000155973.b.c.d.a	ENSGT00940000164842	ENSGT00390000003680.a.a.b	ENSGT00390000001134.b.`b.b.i.b	ENSGT00390000014072.A.g	ENSGT01060000248594.e.a.n.a.b	ENSGT01060000248840.b.a.b
Atlantic salmon	MODERN SPECIES	26	ENSSSAG00000085385	ENSSSAG00000091035	ENSSSAG00000003217	ENSSSAG00000097744	ENSSSAG00000096566	ENSSSAG00000003391	ENSSSAG00000009941	ENSSSAG00000086490	ENSSSAG00000109658	ENSSSAG00000117040	ENSSSAG00000003402	ENSSSAG00000097950	ENSSSAG00000003568	ENSSSAG00000003443	ENSSSAG00000003560	ENSSSAG00000042383 #22	ENSSSAG00000085201	ENSSSAG00000049278	ENSSSAG00000044254	ENSSSAG00000003781	ENSSSAG00000119657	rnf175 (ENSSSAG00000010094)	fgb (ENSSSAG00000115340)	fga (ENSSSAG00000113030)	ENSSSAG00000003846	ENSSSAG00000121940	ENSSSAG00000015655	zgc:77880 (ENSSSAG00000003867)	pip4p1b (ENSSSAG00000003862)	ENSSSAG00000110906	ENSSSAG00000003857
River trout	MODERN SPECIES	38	ENSSTUG00000003534	ENSSTUG00000003560	ENSSTUG00000003596	cyp17a2 (ENSSTUG00000003666)	ENSSTUG00000003678	ENSSTUG00000003690	ENSSTUG00000003708	ENSSTUG00000003716	ENSSTUG00000003727	ENSSTUG00000003735	ENSSTUG00000003745	ENSSTUG00000003771	TMEM184C (ENSSTUG00000003809)	rnf150b (ENSSTUG00000003956)	ENSSTUG00000004004 ##22	tec (ENSSTUG00000004463) #22	ENSSTUG00000004678	ENSSTUG00000004686	ENSSTUG00000004703	rnf175 (ENSSTUG00000004967)	ENSSTUG00000005001	ENSSTUG00000005052	ENSSTUG00000005055	LRAT (ENSSTUG00000005064)	ENSSTUG00000005067	ENSSTUG00000005071	cnpy3 (ENSSTUG00000005090)	ENSSTUG00000005107	ENSSTUG00000005162	ENSSTUG00000005166	ENSSTUG00000005185
Oncorhynchus	ANCESTRAL SPECIES	9											ENSGT00930000151815	ENSGT00940000155201.d	ENSGT00940000163277	ENSGT00940000156171.h.p.a	ENSGT00940000155951.a ##22	ENSGT00940000155951.b.`b #22	ENSGT00950000182907.a.b.a.a	ENSGT00940000155905.b.k	ENSGT00940000156323.c.b	ENSGT00390000013075.b	ENSGT00940000158122.j	ENSGT00940000157467.z	ENSGT00390000011679	ENSGT00510000047351.b.s	ENSGT00940000155973.b.c.d.a	ENSGT00940000164842	ENSGT00390000003680.a.a.b	ENSGT00390000015415	ENSGT00950000182985.b.b.sc.d.a.a	ENSGT00940000166331.f	ENSGT00940000160303.a.a.a
Rainbow trout	MODERN SPECIES	13	ENSOMYG00000074974	ENSOMYG00000024352	ENSOMYG00000024410	ENSOMYG00000024492	ENSOMYG00000024644	ENSOMYG00000067707	ENSOMYG00000061205	ENSOMYG00000055044	ENSOMYG00000060178	ENSOMYG00000024789	ENSOMYG00000062282	ENSOMYG00000051937	ENSOMYG00000062617	ENSOMYG00000024855	ENSOMYG00000061706 ##22	ENSOMYG00000068538 #22	ENSOMYG00000054671	ENSOMYG00000067550	ENSOMYG00000058414	ENSOMYG00000076514	ENSOMYG00000024133	rnf175 (ENSOMYG00000016691)	fgb (ENSOMYG00000073865)	fga (ENSOMYG00000056976)	ENSOMYG00000065635	ENSOMYG00000024056	ENSOMYG00000051393	zgc:77880 (ENSOMYG00000060039)	ENSOMYG00000075790	ENSOMYG00000012002	ENSOMYG00000051074
Oncorhynchus_a	ANCESTRAL SPECIES	231													ENSGT00940000155201.d	ENSGT00940000163277	ENSGT00940000155951.a ##22	ENSGT00940000155951.b.`b #22	ENSGT00950000182907.a.b.a.a	ENSGT00940000155905.b.k	ENSGT00940000156323.c.b	ENSGT00390000013075.b	ENSGT00940000157467.z	ENSGT00390000011679
Coho salmon	MODERN SPECIES	29	ENSOKIG00005032656	ENSOKIG00005032673	ENSOKIG00005032733	ENSOKIG00005032740	LRAT (ENSOKIG00005032762)	NPY2R (ENSOKIG00005032772)	zgc:77880 (ENSOKIG00005032788)	PIP4P1 (ENSOKIG00005032812)	ENSOKIG00005032850	TMEM184C (ENSOKIG00005032865)	ENSOKIG00005032916	ENSOKIG00005032932	ENSOKIG00005032937	RNF150 (ENSOKIG00005032959)	ENSOKIG00005032968 ##22	TEC (ENSOKIG00005033007) #22	ENSOKIG00005033352	ENSOKIG00005033369	ENSOKIG00005033376	ENSOKIG00005033393	ENSOKIG00005033444	rnf175 (ENSOKIG00005033556)	ENSOKIG00005033614	fga (ENSOKIG00005033627)	ENSOKIG00005033637	FHIP1A (ENSOKIG00005033720)	ENSOKIG00005034063	ENSOKIG00005034265	ENSOKIG00005034267	ENSOKIG00005034272	ENSOKIG00005034290
Northern pike	MODERN SPECIES	23	ENSELUG00000032960	ENSELUG00000006985	ENSELUG00000007025	smad1 (ENSELUG00000007066)	ENSELUG00000007102	anapc10 (ENSELUG00000007131)	ENSELUG00000007276	ENSELUG00000007363	ENSELUG00000007423	rnf150b (ENSELUG00000007475)	ENSELUG00000007484	PPM1K (ENSELUG00000007501)	abcg2a (ENSELUG00000007520)	ENSELUG00000007538	ENSELUG00000007553 ##22	tec (ENSELUG00000007644) #22	CORO2A (ENSELUG00000029366)	ENSELUG00000007665	ENSELUG00000007677	ENSELUG00000027619	ENSELUG00000007702	ENSELUG00000007694	ENSELUG00000034018	tkfc (ENSELUG00000007754)	exoc6b (ENSELUG00000007793)	dysf (ENSELUG00000006056)	ENSELUG00000005762	ENSELUG00000005730	trpc5a (ENSELUG00000008476)	cnpy3 (ENSELUG00000000311)	ENSELUG00000008430
Acanthomorphata	ANCESTRAL SPECIES	172	ENSGT00390000013722	ENSGT00940000155694.h	ENSGT00940000180552	ENSGT00950000182936.a.a.b.b	ENSGT00940000154986.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d
Euacanthomorphacea	ANCESTRAL SPECIES	3	ENSGT00940000178415	ENSGT00390000015089	ENSGT00390000013722	ENSGT01010000228954	ENSGT00940000154986.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00930000150973.B.f	ENSGT00940000158660	ENSGT00940000162501	ENSGT00940000156733	ENSGT00940000157297	ENSGT00940000158403	ENSGT00940000156801.h	ENSGT00940000157587.k	ENSGT00490000044733	ENSGT00390000017043	ENSGT00940000156171.g	ENSGT00940000157878
Pinecone sodierfish	MODERN SPECIES	9	ENSMMDG00005016006	ENSMMDG00005016002	ENSMMDG00005016001	ENSMMDG00005015999	ENSMMDG00005015978	rnf150b (ENSMMDG00005015976)	ENSMMDG00005015971	ENSMMDG00005015967	PPM1K (ENSMMDG00005015933)	abcg2a (ENSMMDG00005012651)	ENSMMDG00005012610	ENSMMDG00005012608	ENSMMDG00005012606	ENSMMDG00005012548 ##22	ENSMMDG00005012545 ##22	tec (ENSMMDG00005012524) #22	ENSMMDG00005012520	ENSMMDG00005012519	ENSMMDG00005012516	ENSMMDG00005012515	CORO2A (ENSMMDG00005012505)	ENSMMDG00005004621	ENSMMDG00005004616	sh3gl2b (ENSMMDG00005004612)	TMEM184C (ENSMMDG00005004605)	ednrab (ENSMMDG00005002420)	slc10a7 (ENSMMDG00005002396)	SMAD1 (ENSMMDG00005002381)	ENSMMDG00005002369	ENSMMDG00005002040	anapc10 (ENSMMDG00005002021)
Percomorphaceae	ANCESTRAL SPECIES	63	ENSGT00940000159922.a.b	ENSGT00940000178415	ENSGT00390000015089	ENSGT00390000013722	ENSGT00940000154986.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d
Tiger tail seahorse	MODERN SPECIES	181	ENSHCOG00000013599	ENSHCOG00000013593	ctdnep1a (ENSHCOG00000013584)	elp5 (ENSHCOG00000013566)	phf23b (ENSHCOG00000000391)	plscr3b (ENSHCOG00000013554)	tnk1 (ENSHCOG00000013521)	DXO (ENSHCOG00000013410)	trmt44 (ENSHCOG00000013392)	ENSHCOG00000013376	anapc10 (ENSHCOG00000013358)	tox4b (ENSHCOG00000013346)	supt16h (ENSHCOG00000013334)	ENSHCOG00000013289	mrpl48 (ENSHCOG00000013282)	tec (ENSHCOG00000013273) #22	ENSHCOG00000013263	ltb4r2a (ENSHCOG00000013252)	ENSHCOG00000013246	ndrg2 (ENSHCOG00000013225)	ENSHCOG00000013193	ENSHCOG00000013184	eif4e2rs1 (ENSHCOG00000013138)	atp1b2a (ENSHCOG00000013118)	ENSHCOG00000013107	zgc:153012 (ENSHCOG00000013086)
Percomorphaceae_B	ANCESTRAL SPECIES	19	ENSGT00390000015089	ENSGT00390000013722	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d	ENSGT01000000221658	ENSGT01030000234592.A.a.b.j	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000169316	ENSGT00980000199186	ENSGT01050000244843.c.a.b.a.a.a.b.a.b.b.b.a.a.a	ENSGT01050000244843.c.a.b.a.a.a.b.a.a.b.a	ENSGT00940000160928.n.b.c.b	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000155905.b	ENSGT00390000013075.b
Ovalentaria	ANCESTRAL SPECIES	20	ENSGT00390000015089	ENSGT00390000013722	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.j	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000169316	ENSGT00940000160928.n.b.c.b	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000155905.b	ENSGT00390000013075.b	ENSGT00390000005182.j	ENSGT00940000156323.c.b	ENSGT00970000193619	ENSGT00970000193500
Atherinomorphae	ANCESTRAL SPECIES	22	ENSGT00390000013075.b	ENSGT00940000155905.b	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000160928.n.b.c.b	ENSGT00940000169316	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.j	ENSGT00940000155598.b	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000163277	ENSGT00390000011932	ENSGT00390000008611	ENSGT01100000263512.a.a.b.a	ENSGT00940000155201.d	ENSGT01100000263529.a.a.a.a.b.c.a	ENSGT00940000154895.a.a	ENSGT00940000155694.h
Cyprinodontiformes	DUPLICATION
Cyprinodontiformes	ANCESTRAL SPECIES																	ENSGT00940000155951.b.ab #22
Cyprinodontoidei	ANCESTRAL SPECIES																	ENSGT00940000155951.b.ab #22
NAME_4	ANCESTRAL SPECIES																	ENSGT00940000155951.b.ab #22
Mummichog	MODERN SPECIES	689					ENSFHEG00000023031	ENSFHEG00000000570	ENSFHEG00000023066	ENSFHEG00000023097	ENSFHEG00000023146	ENSFHEG00000023173	ENSFHEG00000023193	ENSFHEG00000023199	ENSFHEG00000023208	tec (ENSFHEG00000001851) #22	ENSFHEG00000000863 ##22	ENSFHEG00000001860 #22
Poeciliinae	ANCESTRAL SPECIES																	ENSGT00940000155951.b.ab #22
Poecilia	ANCESTRAL SPECIES																	ENSGT00940000155951.b.ab #22
Guppy	MODERN SPECIES	448	ENSPREG00000002839	ENSPREG00000002832	ENSPREG00000002816	abce1 (ENSPREG00000002793)	anapc10 (ENSPREG00000002780)	ENSPREG00000002772	ENSPREG00000002762	ENSPREG00000002746	ENSPREG00000002739	ENSPREG00000002722	ENSPREG00000002658	ENSPREG00000002542 #22	ENSPREG00000002521	ENSPREG00000002506 #22	ENSPREG00000002475 ##22	ENSPREG00000002464 #22	ENSPREG00000002434	abcg2a (ENSPREG00000002279)	PPM1K (ENSPREG00000002243)	rnf150b (ENSPREG00000002234)	ENSPREG00000002224	ENSPREG00000002215	ENSPREG00000002195	ENSPREG00000002153	ENSPREG00000002137	ENSPREG00000002023	ENSPREG00000001979	ENSPREG00000001948	ENSPREG00000001942	ENSPREG00000001934	ENSPREG00000001928
Cyprinodontiformes	ANCESTRAL SPECIES	22	ENSGT00940000160928.n.b.c.a.b	ENSGT00940000169316	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01050000244866.D.a.d	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT01090000260059.a.b.b.b.b.f.a.b.a	ENSGT00940000156171.h	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b.bb #22	ENSGT00940000177950	ENSGT01090000260059.a.b.b.b.b.f.a.a.c.a	ENSGT00940000154986.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000163277	ENSGT00390000011932	ENSGT00390000008611	ENSGT01100000263512.a.a.b.a	ENSGT00940000155201.d	ENSGT01100000263529.a.a.a.a.b.c.a	ENSGT00940000154895.a.a	ENSGT00940000155694.h	ENSGT00950000182936.a.a.b.b
Aplocheiloidei	ANCESTRAL SPECIES	71	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01050000244866.D.a.d	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT01090000260059.a.b.b.b.b.f.a.b.a	ENSGT00940000156171.h	ENSGT00570000079168.b.b.b	ENSGT01030000234528.A.a.a	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b.bb #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01090000260059.a.b.b.b.b.f.a.a.c.a	ENSGT00940000154986.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000156063.l	ENSGT00940000163277	ENSGT00390000011932	ENSGT01100000263512.a.a.b.a	ENSGT00940000155201.d	ENSGT01100000263529.a.a.a.a.b.c.a	ENSGT00940000154895.a.a	ENSGT00940000155694.h	ENSGT00950000182936.a.a.b.b
Mangrove rivulus	MODERN SPECIES	409														ENSKMAG00000004990	ENSKMAG00000004930 ##22	tec (ENSKMAG00000004815) #22	si:ch211-133n4.4 (ENSKMAG00000004790)	ENSKMAG00000004778	ENSKMAG00000004755	ENSKMAG00000004740	ENSKMAG00000004716	anapc10 (ENSKMAG00000004668)	abce1 (ENSKMAG00000004632)	ENSKMAG00000004604	ENSKMAG00000004587	ENSKMAG00000004564	slc10a7 (ENSKMAG00000004501)	ednrab (ENSKMAG00000004482)	TMEM184C (ENSKMAG00000004438)	ENSKMAG00000004412
Turquoise killifish	MODERN SPECIES	1613	ENSNFUG00015000442	ENSNFUG00015000458	ENSNFUG00015000498	ENSNFUG00015000525	ENSNFUG00015000534	ENSNFUG00015000545	ENSNFUG00015000553	ENSNFUG00015000561	ENSNFUG00015000565	RNF150A (ENSNFUG00015000570)	ENSNFUG00015000583	PPM1K (ENSNFUG00015000591)	ABCG2A (ENSNFUG00015000793)	ENSNFUG00015001253	ENSNFUG00015001289 ##22	TEC (ENSNFUG00015001333) #22	ENSNFUG00015001380	ENSNFUG00015001387	ENSNFUG00015001392	ENSNFUG00015001394	ENSNFUG00015001399	CDK9 (ENSNFUG00015001400)	ENSNFUG00015001406	FBXW7 (ENSNFUG00015001423)	ANAPC10 (ENSNFUG00015001454)	ABCE1 (ENSNFUG00015001464)	ENSNFUG00015001482	ENSNFUG00015001489	ENSNFUG00015001494	ENSNFUG00015001500	ENSNFUG00015001506
Cyprinodontoidei	ANCESTRAL SPECIES	21		ENSGT00940000169316.a	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT00940000177988	ENSGT01050000244866.D.a.d	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b.bb #22	ENSGT00940000177950	ENSGT00940000154986.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000163277	ENSGT00390000011932	ENSGT00390000008611	ENSGT01100000263512.a.a.b.a	ENSGT00940000155201.d	ENSGT01100000263529.a.a.a.a.b.c.a.x.b	ENSGT01100000263529.a.a.a.a.b.c.a.x.a	ENSGT00940000154895.a.a	ENSGT00940000155694.h	ENSGT00950000182936.a.a.b.b
NAME_4	ANCESTRAL SPECIES	365											ENSGT00940000156171.h	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b.bb #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01090000260059.a.b.b.b.b.f.a.a.c.a
Mummichog	MODERN SPECIES	689														ENSFHEG00000001860 #22	ENSFHEG00000000863 ##22	tec (ENSFHEG00000001851) #22	ENSFHEG00000023208	ENSFHEG00000023199	ENSFHEG00000023193	ENSFHEG00000023173	ENSFHEG00000023146	ENSFHEG00000023097	ENSFHEG00000023066	ENSFHEG00000000570	ENSFHEG00000023031
Sheepshead minnow	MODERN SPECIES	1045								ENSCVAG00000009620	ENSCVAG00000009625	ENSCVAG00000009673	rnf150b (ENSCVAG00000009696)	PPM1K (ENSCVAG00000009715)	abcg2a (ENSCVAG00000009740)	ENSCVAG00000009813	ENSCVAG00000009824 ##22	ENSCVAG00000009835 #22	ENSCVAG00000009845	si:ch211-133n4.4 (ENSCVAG00000009853)	ENSCVAG00000009859
Poeciliinae	DUPLICATION
Poeciliinae	ANCESTRAL SPECIES	32	ENSGT00990000204085.e.a	ENSGT00940000169316.a	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT00940000177988	ENSGT01050000244866.D.a.d	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b.bb.a #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01090000260059.a.b.b.b.a.c.b.b.b.a.a.b.b	ENSGT00940000154986.a	ENSGT01090000260059.a.b.b.b.a.c.b.b.a.a.a.b.a.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000163277	ENSGT00390000011932	ENSGT00390000008611	ENSGT01100000263512.a.a.b.a	ENSGT00940000155201.d	ENSGT01100000263529.a.a.a.a.b.c.a.x.b	ENSGT01100000263529.a.a.a.a.b.c.a.x.a	ENSGT00940000154895.a.a
Poecilia	ANCESTRAL SPECIES	63	ENSGT00940000169316.a.a	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT00940000177988	ENSGT01050000244866.D.a.d	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.a.a.a.c.b	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b.bb.a #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01090000260059.a.b.b.b.a.c.b.b.b.a.a.b.b	ENSGT00940000154986.a	ENSGT01090000260059.a.b.b.b.a.c.b.b.a.a.a.b.a.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000163277	ENSGT00390000011932	ENSGT00390000008611	ENSGT01100000263512.a.a.b.a	ENSGT00940000155201.d	ENSGT01100000263529.a.a.a.a.b.c.a.x.b	ENSGT01100000263529.a.a.a.a.b.c.a.x.a	ENSGT00940000154895.a.a
NAME_6	ANCESTRAL SPECIES	213										ENSGT01090000260059.a.b.b.b.a.c.b.b.a.a.a.a.a.a.b.a.b	ENSGT00940000156171.h	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b.bb.a #22	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000154986.a	ENSGT01090000260059.a.b.b.b.a.c.b.b.a.a.a.b.a.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000163277	ENSGT00390000011932	ENSGT00390000008611	ENSGT01100000263512.a.a.b.a	ENSGT00940000155201.d	ENSGT01100000263529.a.a.a.a.b.c.a.x.b	ENSGT01100000263529.a.a.a.a.b.c.a.x.a	ENSGT00940000154895.a.a	ENSGT01090000260059.a.b.b.b.a.c.b.a.a.b.a
Sailfin molly	MODERN SPECIES	1441										ENSPLAG00000009952	rnf150b (ENSPLAG00000009908)	PPM1K (ENSPLAG00000009844)	abcg2a (ENSPLAG00000009807)	ENSPLAG00000009776	ENSPLAG00000009292 ##22	tec (ENSPLAG00000009168) #22	ENSPLAG00000009113
Amazon molly	MODERN SPECIES	538							ENSPFOG00000017753	ENSPFOG00000023201	ENSPFOG00000018204	ENSPFOG00000020809	rnf150b (ENSPFOG00000017758)	PPM1K (ENSPFOG00000017785)	abcg2a (ENSPFOG00000017801)	ENSPFOG00000017860	ENSPFOG00000017871 ##22	tec (ENSPFOG00000017971) #22	ENSPFOG00000018048	ENSPFOG00000018056	anapc10 (ENSPFOG00000018074)	abce1 (ENSPFOG00000018078)	ENSPFOG00000018105	ENSPFOG00000018117	slc10a7 (ENSPFOG00000018121)	TTC29 (ENSPFOG00000018125)	ednrab (ENSPFOG00000018152)	TMEM184C (ENSPFOG00000018179)	ENSPFOG00000018197	ENSPFOG00000022359	DCLK2 (ENSPFOG00000018202)	ENSPFOG00000018052	ENSPFOG00000024844
Guppy	MODERN SPECIES	448	ENSPREG00000001979	ENSPREG00000002023	ENSPREG00000002137	ENSPREG00000002153	ENSPREG00000002195	ENSPREG00000002215	ENSPREG00000002224	rnf150b (ENSPREG00000002234)	PPM1K (ENSPREG00000002243)	abcg2a (ENSPREG00000002279)	ENSPREG00000002434	ENSPREG00000002464 #22	ENSPREG00000002475 ##22	ENSPREG00000002506 #22	ENSPREG00000002521	ENSPREG00000002542 #22	ENSPREG00000002658	ENSPREG00000002722	ENSPREG00000002739	ENSPREG00000002746	ENSPREG00000002762	ENSPREG00000002772	anapc10 (ENSPREG00000002780)	abce1 (ENSPREG00000002793)	ENSPREG00000002816	ENSPREG00000002832	ENSPREG00000002839	slc10a7 (ENSPREG00000002861)	TTC29 (ENSPREG00000002935)	ednrab (ENSPREG00000002978)	TMEM184C (ENSPREG00000003110)
Platyfish	MODERN SPECIES	5	CORO2A (ENSXMAG00000009901)	ENSXMAG00000009849	ENSXMAG00000024148	ENSXMAG00000029034	ENSXMAG00000009838	ENSXMAG00000009808	ENSXMAG00000023288	ENSXMAG00000027845	ENSXMAG00000027235	ENSXMAG00000026712	rnf150b (ENSXMAG00000026837)	PPM1K (ENSXMAG00000009792)	abcg2a (ENSXMAG00000009769)	ENSXMAG00000009765	ENSXMAG00000009726 ##22	tec (ENSXMAG00000009665) #22	ENSXMAG00000028382	ENSXMAG00000021648	ENSXMAG00000029215	ENSXMAG00000026423	ENSXMAG00000022262	ENSXMAG00000027354	ENSXMAG00000024742	ENSXMAG00000001769	ENSXMAG00000027020	anapc10 (ENSXMAG00000001772)	abce1 (ENSXMAG00000001778)	ENSXMAG00000021150	ENSXMAG00000026468	REELD1 (ENSXMAG00000024845)	slc10a7 (ENSXMAG00000001794)
Poeciliinae	ANCESTRAL SPECIES	144																ENSGT00940000155951.b.bb.b #22	ENSGT00940000177950
Poecilia	ANCESTRAL SPECIES	208																ENSGT00940000155951.b.bb.b #22	ENSGT00940000177950
Guppy	MODERN SPECIES	448	ENSPREG00000001942	ENSPREG00000001948	ENSPREG00000001979	ENSPREG00000002023	ENSPREG00000002137	ENSPREG00000002153	ENSPREG00000002195	ENSPREG00000002215	ENSPREG00000002224	rnf150b (ENSPREG00000002234)	PPM1K (ENSPREG00000002243)	abcg2a (ENSPREG00000002279)	ENSPREG00000002434	ENSPREG00000002464 #22	ENSPREG00000002475 ##22	ENSPREG00000002506 #22	ENSPREG00000002521	ENSPREG00000002542 #22	ENSPREG00000002658	ENSPREG00000002722	ENSPREG00000002739	ENSPREG00000002746	ENSPREG00000002762	ENSPREG00000002772	anapc10 (ENSPREG00000002780)	abce1 (ENSPREG00000002793)	ENSPREG00000002816	ENSPREG00000002832	ENSPREG00000002839	slc10a7 (ENSPREG00000002861)	TTC29 (ENSPREG00000002935)
Oryzias	ANCESTRAL SPECIES	21	ENSGT00940000163711.b.e.a.a.a	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j.i.b	ENSGT01030000234592.A.a.b.j.i.a	ENSGT01070000253760.b.a.a.a.b.a.a.b.a.a.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.j.j	ENSGT01090000260059.a.b.b.b.b.f.a.a.c.a	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT01090000260059.a.b.b.a.a.b.b.d.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000156063.l	ENSGT00940000163277	ENSGT00390000011932	ENSGT00940000174503	ENSGT01100000263512.a.a.b.a	ENSGT00940000155201.d	ENSGT01100000263529.a.a.a.a.b.c.a.t
Oryzias_b	ANCESTRAL SPECIES	18	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j.i.b.b	ENSGT01030000234592.A.a.b.j.i.b.a	ENSGT01030000234592.A.a.b.j.i.a.a	ENSGT01070000253760.b.a.a.a.b.a.a.b.a.a.a.a.b	ENSGT01070000253760.b.a.a.a.b.a.a.b.a.a.a.b	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT01090000260059.a.b.b.b.b.f.a.b	ENSGT00940000156171.h	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.j.j.a.b	ENSGT01030000234592.A.a.b.j.j.b	ENSGT01030000234592.A.a.b.j.j.a.a	ENSGT01090000260059.a.b.b.b.b.f.a.a.c.a	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT01090000260059.a.b.b.a.a.b.b.d.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000156063.l	ENSGT00940000163277	ENSGT00390000011932	ENSGT00940000174503	ENSGT01100000263512.a.a.b.a
Indian medaka	MODERN SPECIES	19	ENSOMEG00000023132	ENSOMEG00000023164	ENSOMEG00000023177	ENSOMEG00000023181	ENSOMEG00000023200	ENSOMEG00000023244	ENSOMEG00000023273	ENSOMEG00000000796	ENSOMEG00000023286	rnf150b (ENSOMEG00000023296)	PPM1K (ENSOMEG00000023318)	abcg2a (ENSOMEG00000023363)	ENSOMEG00000023381	ENSOMEG00000023385 ##22	ENSOMEG00000023395 ##22	tec (ENSOMEG00000023411) #22	ENSOMEG00000023417	ENSOMEG00000023425	ENSOMEG00000023430	ENSOMEG00000023439	ENSOMEG00000023445	anapc10 (ENSOMEG00000023452)	abce1 (ENSOMEG00000023486)	ENSOMEG00000000729	slc10a7 (ENSOMEG00000023585)	ENSOMEG00000023606	ednrab (ENSOMEG00000023612)	TMEM184C (ENSOMEG00000023631)	ENSOMEG00000001305	ENSOMEG00000001308	ENSOMEG00000001315
Oryzias_a	ANCESTRAL SPECIES	40	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j.i.b	ENSGT01030000234592.A.a.b.j.i.a	ENSGT01070000253760.b.a.a.a.b.a.a.b.a.a.a	ENSGT01070000253760.b.a.a.a.b.a.a.b.a.b.a.b.b.a.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000160368	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.j.j.d	ENSGT01030000234592.A.a.b.j.j.c	ENSGT01090000260059.a.b.b.b.b.f.a.a.c.a	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT01090000260059.a.b.b.a.a.b.b.d.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000156063.l	ENSGT00940000163277	ENSGT00390000011932	ENSGT01100000263512.a.a.b.a	ENSGT00940000155201.d	ENSGT01100000263529.a.a.a.a.b.c.a.s
Japanese Medaka HdrR	MODERN SPECIES	9	ENSORLG00000020213	ENSORLG00000025979	ENSORLG00000022271	ENSORLG00000025474	ENSORLG00000003160	ENSORLG00000016854	ENSORLG00000029955	ENSORLG00000027381	ENSORLG00000030403	ENSORLG00000023533	ENSORLG00000002665	rnf150b (ENSORLG00000002672)	ENSORLG00000002701	abcg2a (ENSORLG00000002735)	ENSORLG00000026536	tec (ENSORLG00000002788) #22	ENSORLG00000002748 ##22	ENSORLG00000026972	ENSORLG00000025136	ENSORLG00000002808	ENSORLG00000002838	ENSORLG00000030607	ENSORLG00000002841	ENSORLG00000021793	ENSORLG00000030336	anapc10 (ENSORLG00000002856)	abce1 (ENSORLG00000002875)	ENSORLG00000029809	ENSORLG00000023060	ENSORLG00000023482	slc10a7 (ENSORLG00000002993)
Chinese medaka	DUPLICATION
Chinese medaka	MODERN SPECIES	975												ENSOSIG00000016750	rnf150b (ENSOSIG00000016751)	PPM1K (ENSOSIG00000016753)	abcg2a (ENSOSIG00000016811)	ENSOSIG00000018054 #22	ENSOSIG00000018062 ##22	tec (ENSOSIG00000018123) #22
Chinese medaka	MODERN SPECIES	975																tec (ENSOSIG00000018123) #22	ENSOSIG00000018062 ##22	ENSOSIG00000018054 #22	abcg2a (ENSOSIG00000016811)	PPM1K (ENSOSIG00000016753)	rnf150b (ENSOSIG00000016751)	ENSOSIG00000016750
Ovalentaria_B	ANCESTRAL SPECIES	19	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.j	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d
Cichlidae	ANCESTRAL SPECIES	57	ENSGT00390000015089	ENSGT00390000013722	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.b.a.b.a.c.b.b	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b.b	ENSGT00940000163999.b.a.b.a	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000156801.g	ENSGT01060000248594.e.a.n	ENSGT00390000014072.A	ENSGT00390000001134.b.`b.b	ENSGT00940000158972	ENSGT00940000157904.b	ENSGT00940000164842	ENSGT00940000166122	ENSGT00990000203723.b.b	ENSGT00390000003680.a.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	45	ENSGT00390000011932	ENSGT00940000163277	ENSGT00940000156063.l	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.b.a.b.a.c.b.b	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000163999.b.a.b.a.a	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d.d	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000156801.g	ENSGT01060000248594.e.a.n	ENSGT00390000014072.A	ENSGT00390000001134.b.`b.b	ENSGT00940000158972	ENSGT00940000157904.b	ENSGT00940000164842	ENSGT00940000166122	ENSGT00990000203723.b.b	ENSGT00390000003680.a.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	63	ENSGT00390000011932	ENSGT00940000163277	ENSGT00940000156063.l	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.b.a.b.a.c.b.b	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000163999.b.a.b.a.a	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d
Haplochromini	ANCESTRAL SPECIES	71	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.b.a.b.a.c.b.b	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h.h.b	ENSGT00940000163999.b.a.b.b	ENSGT00940000163999.b.a.b.a.b	ENSGT00940000163999.b.a.b.a.a.a.b	ENSGT00940000156633.d.b	ENSGT00940000166038.c	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d.c	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d
Burton s mouthbrooder	MODERN SPECIES	993									ENSHBUG00000014518	ENSHBUG00000014569	ENSHBUG00000014582	abcg2a (ENSHBUG00000014939)	ENSHBUG00000014975	ENSHBUG00000014991 ##22	ENSHBUG00000015006 ##22	tec (ENSHBUG00000015114) #22
Haplochromini_A	ANCESTRAL SPECIES	77	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.b.a.b.a.c.b.b	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h.h.b	ENSGT00940000163999.b.a.b.b	ENSGT00940000163999.b.a.b.a.b	ENSGT00940000163999.b.a.b.a.a.a.b	ENSGT00940000156633.d.b	ENSGT00940000166038.c	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d.c	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d
Haplochromini_B	ANCESTRAL SPECIES	105			ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.b.a.b.b.a.b.a.a.a	ENSGT00940000156171.h.h.b	ENSGT00940000163999.b.a.b.b	ENSGT00940000163999.b.a.b.a.b	ENSGT00940000163999.b.a.b.a.a.a.a	ENSGT00940000163999.b.a.b.a.a.a.b	ENSGT00940000156633.d.b	ENSGT00940000166038.c	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d.c	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d
Zebra mbuna	MODERN SPECIES	72									ENSMZEG00005021677	ENSMZEG00005019700	PPM1K (ENSMZEG00005019670)	abcg2a (ENSMZEG00005019664)	ENSMZEG00005019656	ENSMZEG00005019650 ##22	ENSMZEG00005019645 ##22	tec (ENSMZEG00005019633) #22	ENSMZEG00005019620	ENSMZEG00005019607	CORO2A (ENSMZEG00005019589)	ENSMZEG00005019583	ENSMZEG00005019572
Eastern happy	MODERN SPECIES	22	ENSACLG00000012680	ENSACLG00000012815	ENSACLG00000012823	ENSACLG00000012840	rnf150b (ENSACLG00000012848)	ENSACLG00000012866	ENSACLG00000012888	ENSACLG00000013477	ENSACLG00000014819	ENSACLG00000015201	PPM1K (ENSACLG00000015210)	abcg2a (ENSACLG00000015231)	ENSACLG00000015270	ENSACLG00000015292 ##22	ENSACLG00000015309 ##22	tec (ENSACLG00000015323) #22	ENSACLG00000015425	ENSACLG00000015431	ENSACLG00000015455	ENSACLG00000015511	CORO2A (ENSACLG00000015546)	ENSACLG00000015573	ENSACLG00000015621	zmat2 (ENSACLG00000015635)	ENSACLG00000015765	ENSACLG00000015782	ENSACLG00000015791	ENSACLG00000015913	ENSACLG00000015959	ENSACLG00000016077	ENSACLG00000016196
P. nyererei	MODERN SPECIES	663						rnf150b (ENSPNYG00000007563)	ENSPNYG00000007556	ENSPNYG00000007202	ENSPNYG00000006668	ENSPNYG00000006559	ENSPNYG00000006546	abcg2a (ENSPNYG00000006527)	ENSPNYG00000006499	ENSPNYG00000006473 ##22	ENSPNYG00000006467 ##22	tec (ENSPNYG00000006415) #22	ENSPNYG00000006388	ENSPNYG00000006296	CORO2A (ENSPNYG00000006260)	ENSPNYG00000006247	ENSPNYG00000006223
Lyretail cichlid	MODERN SPECIES	442	ENSNBRG00000002079	ENSNBRG00000002067	ENSNBRG00000002031	ENSNBRG00000002019	ENSNBRG00000001577	ENSNBRG00000001534	ENSNBRG00000001522	ENSNBRG00000001512	ENSNBRG00000001501	ENSNBRG00000001329	PPM1K (ENSNBRG00000001303)	abcg2a (ENSNBRG00000001290)	ENSNBRG00000001226	ENSNBRG00000001194 ##22	ENSNBRG00000001186	tec (ENSNBRG00000001125) #22	CORO2A (ENSNBRG00000001089)	ENSNBRG00000001082	ENSNBRG00000001053
Nile tilapia	MODERN SPECIES	15	ENSONIG00000011683	ENSONIG00000030653	ENSONIG00000036342	ENSONIG00000031426	ENSONIG00000033222	ENSONIG00000011675	ENSONIG00000019534	ENSONIG00000028669	rnf150b (ENSONIG00000037071)	ENSONIG00000011671	ENSONIG00000030781	PPM1K (ENSONIG00000011668)	abcg2a (ENSONIG00000011661)	ENSONIG00000011659	ENSONIG00000011645 ##22	tec (ENSONIG00000011633) #22	ENSONIG00000042833	ENSONIG00000028152	ENSONIG00000030563	ENSONIG00000032017	ENSONIG00000011621	ENSONIG00000029362	ENSONIG00000031550	CORO2A (ENSONIG00000011617)	ENSONIG00000011613	ENSONIG00000011610	ENSONIG00000041917	ENSONIG00000011608	ENSONIG00000039070	ENSONIG00000041850	ENSONIG00000032213
Midas cichlid	MODERN SPECIES	898							rnf150b (ENSACIG00000008782)	ENSACIG00000008746	ENSACIG00000008415	ENSACIG00000008143	ENSACIG00000008069	PPM1K (ENSACIG00000008048)	abcg2a (ENSACIG00000008015)	ENSACIG00000007967	ENSACIG00000007951 ##22	tec (ENSACIG00000007859) #22	ENSACIG00000007813
Pomacentridae	ANCESTRAL SPECIES	28	ENSGT00940000154658.a.f	ENSGT00390000017010	ENSGT00940000156823.e	ENSGT00510000047770.c.b	ENSGT00940000160640	ENSGT00800000124172.i	ENSGT00940000159617	ENSGT00390000017890.b.b	ENSGT00940000157146.a.a	ENSGT00940000161036.A.e	ENSGT00530000063854	ENSGT01070000253822.D.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01030000234592.A.a.b.j	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000163711.b.e.b.a.b
Pomacentridae_A	ANCESTRAL SPECIES	22	ENSGT00390000017010	ENSGT00940000156823.e	ENSGT00510000047770.c.b	ENSGT00940000160640	ENSGT00800000124172.i	ENSGT00940000159617	ENSGT00390000017890.b.b	ENSGT00940000157146.a.a	ENSGT00940000161036.A.e	ENSGT00530000063854	ENSGT01070000253822.D.b	ENSGT01090000260059.a.b.b.b.a.d.a.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01030000234592.A.a.b.j.n	ENSGT00940000155598.b.k.a	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000163711.b.e.b.a.b	ENSGT00940000161847.b.a.e.b.mb.b	ENSGT00950000183127.c.b.d.a.b.a.a.a.a.h.b
Amphiprion	ANCESTRAL SPECIES	96	ENSGT00390000017010	ENSGT00940000156823.e	ENSGT00510000047770.c.b	ENSGT00940000160640	ENSGT00800000124172.i	ENSGT00940000159617	ENSGT00390000017890.b.b	ENSGT00940000157146.a.a	ENSGT00940000161036.A.e	ENSGT00530000063854	ENSGT01070000253822.D.b	ENSGT01090000260059.a.b.b.b.a.d.a.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01030000234592.A.a.b.j.n	ENSGT00940000155598.b.k.a	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000163711.b.e.b.a.b	ENSGT00940000161847.b.a.e.b.mb.b	ENSGT00950000183127.c.b.d.a.b.a.a.a.a.h.b.b	ENSGT01030000234598.a.a.b	ENSGT00990000204085	ENSGT01050000244843.c.b.a.a	ENSGT01050000244843.c.a.b.a.a.a.a.a.a	ENSGT00940000161814.g.b.d.b.a	ENSGT00940000161814.g.b.d.a.c
Orange clownfish	MODERN SPECIES	15	CAAP1 (ENSAPEG00000023464)	elavl2 (ENSAPEG00000023474)	ENSAPEG00000023497	DMRTA1 (ENSAPEG00000023525)	FABP2 (ENSAPEG00000023534)	RBPMS (ENSAPEG00000023543)	ENSAPEG00000023550	SGCZ (ENSAPEG00000023566)	ENSAPEG00000023603	mfsd8 (ENSAPEG00000023620)	ENSAPEG00000023637	abcg2a (ENSAPEG00000023653)	ENSAPEG00000023676	ENSAPEG00000023702	ENSAPEG00000023733 ##22	tec (ENSAPEG00000023770) #22	ENSAPEG00000023828	ENSAPEG00000023844	CORO2A (ENSAPEG00000023850)	ENSAPEG00000023860	ENSAPEG00000023872	ENSAPEG00000023892	ENSAPEG00000023898	ENSAPEG00000023913	tfr2 (ENSAPEG00000023927)	ENSAPEG00000023936	ENSAPEG00000023946	ENSAPEG00000023950	ENSAPEG00000023955	ENSAPEG00000023964	ENSAPEG00000023971
Clown anemonefish	MODERN SPECIES	629					FABP2 (ENSAOCG00000007719)	RBPMS (ENSAOCG00000007731)	ENSAOCG00000007764	SGCZ (ENSAOCG00000007780)	ENSAOCG00000000431	mfsd8 (ENSAOCG00000007820)	ENSAOCG00000007839	ENSAOCG00000007852	abcg2a (ENSAOCG00000007876)	ENSAOCG00000007890	ENSAOCG00000007930 ##22	tec (ENSAOCG00000007988) #22	zgc:158445 (ENSAOCG00000008016)	CORO2A (ENSAOCG00000008045)
Spiny chromis	MODERN SPECIES	111	CAAP1 (ENSAPOG00000022103)	elavl2 (ENSAPOG00000022121)	ENSAPOG00000022213	DMRTA1 (ENSAPOG00000000631)	FABP2 (ENSAPOG00000022284)	RBPMS (ENSAPOG00000022304)	ENSAPOG00000022362	SGCZ (ENSAPOG00000022386)	ENSAPOG00000022403	mfsd8 (ENSAPOG00000022463)	ENSAPOG00000022499	ENSAPOG00000022526	abcg2a (ENSAPOG00000022542)	ENSAPOG00000022651	ENSAPOG00000022839 ##22	tec (ENSAPOG00000022888) #22	ENSAPOG00000022923	ENSAPOG00000022953	CORO2A (ENSAPOG00000022981)	ENSAPOG00000022996	ENSAPOG00000023010	ENSAPOG00000023054	ENSAPOG00000023069	ENSAPOG00000023120	ENSAPOG00000023144
Bicolor damselfish	MODERN SPECIES	932	ENSSPAG00000004714	ENSSPAG00000004740	FABP2 (ENSSPAG00000004757)	RBPMS (ENSSPAG00000004777)	ENSSPAG00000004798	ENSSPAG00000004804	SGCZ (ENSSPAG00000004832)	ENSSPAG00000004843	mfsd8 (ENSSPAG00000004887)	ENSSPAG00000004945	abcg2a (ENSSPAG00000004957)	ENSSPAG00000004993	ENSSPAG00000005019	ENSSPAG00000005117	ENSSPAG00000005136 ##22	tec (ENSSPAG00000005257) #22	ENSSPAG00000005291
Percomorphaceae_C	ANCESTRAL SPECIES	20	ENSGT00390000013722	ENSGT01010000228954	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d	ENSGT01000000221658	ENSGT01030000234592.A.a.b.j	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000169316	ENSGT00940000163711.b.e.a.a.b.b	ENSGT00940000160928.n.b.c.b	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000155905.b	ENSGT00390000013075.b	ENSGT00390000005182.j	ENSGT00940000156323.c.b
Percomorphaceae_D	ANCESTRAL SPECIES	20	ENSGT00390000013722	ENSGT01010000228954	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01030000234592.A.a.b.j	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000169316	ENSGT00940000163711.b.e.a.a.b.b	ENSGT00940000160928.n.b.c.b	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000155905.b	ENSGT00390000013075.b	ENSGT00390000005182.j	ENSGT00940000156323.c.b	ENSGT00970000193619	ENSGT00970000193500
Anabantaria	ANCESTRAL SPECIES	19	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000160368	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01030000234592.A.a.b.j	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT01050000244843.c.b.a.a	ENSGT01080000257449	ENSGT01050000244843.c.a.b.a.b.a.a	ENSGT01050000244843.c.a.b.a.a.a.b.a.b.b.b.a.a.a	ENSGT01030000235021	ENSGT00940000160928.n.b.c.b	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000155905.b	ENSGT00390000013075.b	ENSGT00390000005182.j.p
Zig-zag eel	MODERN SPECIES	9	ENSMAMG00000007125	ENSMAMG00000007151	ENSMAMG00000007167	ENSMAMG00000007180	ENSMAMG00000007212	ENSMAMG00000007221	ENSMAMG00000007241	ENSMAMG00000007306	ENSMAMG00000007379	ENSMAMG00000007402	ENSMAMG00000026951	ENSMAMG00000024676	ENSMAMG00000007438	ENSMAMG00000007430	ENSMAMG00000007487 ##22	ENSMAMG00000007527 #22	ENSMAMG00000007673	ENSMAMG00000007677	ENSMAMG00000007685	ENSMAMG00000028373	ENSMAMG00000007692	ENSMAMG00000007700	ENSMAMG00000007716	ENSMAMG00000007641	ENSMAMG00000007732	ENSMAMG00000027894	ENSMAMG00000007777	ENSMAMG00000007812	ENSMAMG00000024795	ENSMAMG00000007849	ENSMAMG00000026267
Anabantoidei	ANCESTRAL SPECIES	24	ENSGT00940000156063.l	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000156171.h	ENSGT00940000163999.b.a.b	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000160368	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01030000234592.A.a.b.j.d	ENSGT01000000221658	ENSGT01030000234592.A.a.b.j.c.b.a	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT01050000244843.c.b.a.a	ENSGT01080000257449	ENSGT01050000244843.c.a.b.a.b.a.a	ENSGT01050000244843.c.a.b.a.a.a.b.a.b.b.b.a.a.a	ENSGT01030000235021	ENSGT00940000160928.n.b.c.b	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000155905.b
Climbing perch	MODERN SPECIES	9	slc10a7 (ENSATEG00000020432)	ENSATEG00000020386	ENSATEG00000020351	abce1 (ENSATEG00000020280)	anapc10 (ENSATEG00000020265)	ENSATEG00000020253	ENSATEG00000020232	ENSATEG00000020215	ENSATEG00000020204	rnf150b (ENSATEG00000014895)	ENSATEG00000014888	ENSATEG00000014850	ENSATEG00000014828	ENSATEG00000014788	ENSATEG00000014757 ##22	ENSATEG00000014707 #22	ENSATEG00000014701	ENSATEG00000027231	ENSATEG00000014686	ENSATEG00000014672	ENSATEG00000025269	ENSATEG00000014589	ENSATEG00000014621	ENSATEG00000014579	ENSATEG00000014573	ENSATEG00000014556	ENSATEG00000014542	ENSATEG00000014520	ENSATEG00000014512	ENSATEG00000014502	ENSATEG00000014488
Siamese fighting fish	MODERN SPECIES	10	ENSBSLG00000001005	ENSBSLG00000001011	ENSBSLG00000001013	TMEM184C (ENSBSLG00000001016)	ednrab (ENSBSLG00000001022)	slc10a7 (ENSBSLG00000001026)	ENSBSLG00000001027	ENSBSLG00000001028	ENSBSLG00000001029	ENSBSLG00000001030	rnf150b (ENSBSLG00000001031)	ENSBSLG00000001032	PPM1K (ENSBSLG00000001034)	abcg2a (ENSBSLG00000001035)	ENSBSLG00000001036	tec (ENSBSLG00000001041) #22	ENSBSLG00000001046	ENSBSLG00000001048	ENSBSLG00000001051	ENSBSLG00000001053	ENSBSLG00000001054	CORO2A (ENSBSLG00000001056)	ENSBSLG00000001061	ENSBSLG00000001066	ENSBSLG00000001067	ENSBSLG00000001068	ENSBSLG00000001070	ENSBSLG00000001193	ENSBSLG00000001220	ENSBSLG00000001236	ENSBSLG00000001251
Carangaria	ANCESTRAL SPECIES	20	ENSGT00390000013722	ENSGT01010000228954	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01050000244866.D.a.d	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000169316	ENSGT00940000163711.b.e.a.a.b.b	ENSGT00940000160928.n.b.c.b	ENSGT00940000155905.b	ENSGT00390000013075.b	ENSGT00390000005182.j	ENSGT00940000156323.c.b	ENSGT00970000193619	ENSGT00970000193500	ENSGT00940000158122	ENSGT00940000157467.u.b
Carangaria_A	ANCESTRAL SPECIES	60	ENSGT00390000015089	ENSGT00390000013722	ENSGT01010000228954	ENSGT00940000154986.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01050000244866.D.a.d	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d
Seriola	ANCESTRAL SPECIES	24	ENSGT00390000015089	ENSGT00390000013722	ENSGT01010000228954	ENSGT00940000154986.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT01050000244843.c.a.b.a.a.b.a.a.s	ENSGT01100000263529.a.a.a.a.b.c.a.h	ENSGT01100000263529.a.a.a.a.b.c.a.g	ENSGT00940000154895.a.a	ENSGT01090000259997.a.d.b.b.b.b.b	ENSGT00940000155694.h	ENSGT00950000182936.a.a.b.b	ENSGT00940000156801.g	ENSGT01060000248594.e.a.n	ENSGT00390000014072.A	ENSGT00390000001134.b.`b.b	ENSGT00940000158972
Greater amberjack	MODERN SPECIES	124	anapc10 (ENSSDUG00000011423)	ENSSDUG00000011410	ENSSDUG00000011385	ENSSDUG00000011352	ENSSDUG00000011337	ENSSDUG00000011296	rnf150b (ENSSDUG00000011273)	ENSSDUG00000011191	ENSSDUG00000011175	ENSSDUG00000011168	PPM1K (ENSSDUG00000011150)	abcg2a (ENSSDUG00000011124)	ENSSDUG00000011081	ENSSDUG00000011061 ##22	ENSSDUG00000011050 ##22	tec (ENSSDUG00000010983) #22	CORO2A (ENSSDUG00000010949)	ENSSDUG00000010928	ENSSDUG00000010891	ENSSDUG00000010878	ENSSDUG00000010868	ENSSDUG00000010827	DCLK2 (ENSSDUG00000010741)	ENSSDUG00000010721	ENSSDUG00000010704	ENSSDUG00000010674	ENSSDUG00000010648	trpc5a (ENSSDUG00000010612)	cnpy3 (ENSSDUG00000010598)	dachb (ENSSDUG00000010555)	ENSSDUG00000010524
Yellowtail amberjack	MODERN SPECIES	3201	abce1 (ENSSLDG00000000134)	anapc10 (ENSSLDG00000000579)	ENSSLDG00000000624	ENSSLDG00000000676	ENSSLDG00000000684	ENSSLDG00000000723	rnf150b (ENSSLDG00000000849)	ENSSLDG00000000872	ENSSLDG00000000922	ENSSLDG00000000950	PPM1K (ENSSLDG00000000954)	abcg2a (ENSSLDG00000001004)	CDKL2 (ENSSLDG00000001187)	ENSSLDG00000001257 ##22	ENSSLDG00000001276 ##22	tec (ENSSLDG00000001296) #22	CORO2A (ENSSLDG00000001430)	ENSSLDG00000001794	ENSSLDG00000001810	ENSSLDG00000001849	ENSSLDG00000001865
Barramundi perch	MODERN SPECIES	478			ENSLCAG00010001031	ENSLCAG00010001023	ENSLCAG00010001021	ENSLCAG00010001018	ENSLCAG00010001006	ENSLCAG00010001002	rnf150b (ENSLCAG00010001000)	ENSLCAG00010000998	ENSLCAG00010000996	PPM1K (ENSLCAG00010000992)	abcg2a (ENSLCAG00010000903)	ENSLCAG00010000852	ENSLCAG00010000849 ##22	tec (ENSLCAG00010000817) #22	ENSLCAG00010000525	CORO2A (ENSLCAG00010000261)	ENSLCAG00010000203	ENSLCAG00010000193	ENSLCAG00010000173	ENSLCAG00010000168	ENSLCAG00010027629
Pleuronectoidei	ANCESTRAL SPECIES	50	ENSGT00390000015089	ENSGT00390000013722	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000175002	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000169316	ENSGT00940000160928.n.b.c.b	ENSGT00940000155905.b	ENSGT00390000013075.b	ENSGT00940000156323.c.b	ENSGT00970000193619	ENSGT00970000193500	ENSGT00940000158122	ENSGT00940000157467.u.a	ENSGT00940000155973.b.c	ENSGT00940000155927	ENSGT00940000165274.a
Tongue sole	MODERN SPECIES		psmb6 (ENSCSEG00000005875)	ephb4b (ENSCSEG00000005849)	ENSCSEG00000005841	ENSCSEG00000005838	ENSCSEG00000005824	ENSCSEG00000005821	ENSCSEG00000005818	DLG4 (ENSCSEG00000005782)	rnf150b (ENSCSEG00000005768)	ENSCSEG00000005760	ENSCSEG00000005749	PPM1K (ENSCSEG00000005745)	abcg2a (ENSCSEG00000005742)	ENSCSEG00000005706	ENSCSEG00000005695 ##22	tec (ENSCSEG00000005689) #22	CORO2A (ENSCSEG00000005679)	ENSCSEG00000005671	ENSCSEG00000005662	ENSCSEG00000005658	ENSCSEG00000005651	ENSCSEG00000005647	ENSCSEG00000005644	ENSCSEG00000005634	rnf175 (ENSCSEG00000005606)	fgb (ENSCSEG00000005560)	fga (ENSCSEG00000005543)	npy2rl (ENSCSEG00000005540)	rbm46 (ENSCSEG00000005530)	LRAT (ENSCSEG00000005518)	ENSCSEG00000005487
Turbot	MODERN SPECIES	11	abce1 (ENSSMAG00000015973)	anapc10 (ENSSMAG00000016035)	ENSSMAG00000016090	ENSSMAG00000016063	ENSSMAG00000016099	ENSSMAG00000016132	ENSSMAG00000016167	rnf150b (ENSSMAG00000016242)	ENSSMAG00000016254	ENSSMAG00000016280	ENSSMAG00000027960	ENSSMAG00000016293	ENSSMAG00000016326	ENSSMAG00000016354	ENSSMAG00000016397 ##22	ENSSMAG00000016413 #22	ENSSMAG00000016494	ENSSMAG00000025678	ENSSMAG00000016549	ENSSMAG00000016661	ENSSMAG00000037857	ENSSMAG00000016683	ENSSMAG00000016691	ENSSMAG00000016702	ENSSMAG00000016718	ENSSMAG00000016761	ENSSMAG00000032176	tlr2 (ENSSMAG00000016802)	ENSSMAG00000016908	ENSSMAG00000016964	ENSSMAG00000017016
Eupercaria	ANCESTRAL SPECIES	19	ENSGT00390000015089	ENSGT00390000013722	ENSGT01010000228954	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.j	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT01050000244843.c.a.b.b	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000163711.b.e.a.a.a
Eupecaria_A	ANCESTRAL SPECIES	20	ENSGT00390000015089	ENSGT00390000013722	ENSGT01010000228954	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.j	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT01050000244843.c.a.b.b	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000163711.b.e.a.a.a
Eupecaria_B	ANCESTRAL SPECIES	20	ENSGT00390000015089	ENSGT00390000013722	ENSGT01010000228954	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.j	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000163711.b.e.a.a.a
Eupecaria_C	ANCESTRAL SPECIES	47				ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.j	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000156801.g	ENSGT01060000248594.e.a.n	ENSGT00390000014072.A	ENSGT00390000001134.b.`b.b	ENSGT00940000158972	ENSGT00940000157904.b	ENSGT00940000164842	ENSGT00390000003680.a.a.b	ENSGT00990000203723.b.f
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	69			ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00990000213964	ENSGT00940000156633.d.b	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.j	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000163711.b.e.a.a.a
European seabass	MODERN SPECIES	32						ENSDLAG00005031958	ENSDLAG00005030780	ENSDLAG00005002580	ENSDLAG00005003302	ENSDLAG00005003318	ENSDLAG00005030098	ENSDLAG00005003445	ENSDLAG00005003602	ENSDLAG00005006572	ENSDLAG00005006614 ##22	ENSDLAG00005006749 #22	ENSDLAG00005006933	ENSDLAG00005031066	ENSDLAG00005015622	ENSDLAG00005015543	ENSDLAG00005032116	ENSDLAG00005012838	ENSDLAG00005028503	ENSDLAG00005006943	ENSDLAG00005006965	ENSDLAG00005006544	ENSDLAG00005034467	ENSDLAG00005030427	ENSDLAG00005033142	ENSDLAG00005030135	ENSDLAG00005031458
Large yellow croaker	MODERN SPECIES	485	DCLK2 (ENSLCRG00005011485)	ENSLCRG00005011604	ENSLCRG00005011785	ENSLCRG00005012021	ENSLCRG00005012040	ENSLCRG00005012067	ENSLCRG00005012070	rnf150b (ENSLCRG00005012080)	ENSLCRG00005012092	ENSLCRG00005012106	ENSLCRG00005012109	PPM1K (ENSLCRG00005012128)	abcg2a (ENSLCRG00005012279)	ENSLCRG00005013264	ENSLCRG00005013323 ##22	tec (ENSLCRG00005013538) #22	ENSLCRG00005013920	ENSLCRG00005013932	ENSLCRG00005013933	ENSLCRG00005013934	CORO2A (ENSLCRG00005013938)	ENSLCRG00005013961	ENSLCRG00005013989	ENSLCRG00005014045	ENSLCRG00005014069	ENSLCRG00005014098	ENSLCRG00005014124	ift46 (ENSLCRG00005014130)	ENSLCRG00005014156	ENSLCRG00005014211	ENSLCRG00005014228
Gilthead seabream	MODERN SPECIES	1	rnf150b (ENSSAUG00010002077)	ENSSAUG00010002086	ENSSAUG00010002093	ENSSAUG00010002096	ENSSAUG00010002103	ENSSAUG00010002131	ENSSAUG00010002334	ENSSAUG00010002338	ENSSAUG00010002340	ENSSAUG00010002345	ENSSAUG00010002348	PPM1K (ENSSAUG00010002353)	abcg2a (ENSSAUG00010002425)	ENSSAUG00010007438	ENSSAUG00010007445 ##22	tec (ENSSAUG00010007469) #22	ENSSAUG00010007494	ENSSAUG00010007496	CORO2A (ENSSAUG00010007500)	ENSSAUG00010007504	ENSSAUG00010007506	ENSSAUG00010007516	ENSSAUG00010007518	ENSSAUG00010007519	ENSSAUG00010007520	ENSSAUG00010007526	ENSSAUG00010007528	ENSSAUG00010007531	ENSSAUG00010007533	ENSSAUG00010007534	ENSSAUG00010007536
Perciformes	ANCESTRAL SPECIES	19	ENSGT00940000178504	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT01010000228954	ENSGT00940000154986.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000156633.d.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d
Cottioidei	ANCESTRAL SPECIES	42	ENSGT00940000163277	ENSGT00940000178504	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT00940000154986.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000156633.d.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT00940000161347.a.a.c.a	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000163711.b.e.a.a.a	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d
Lumpfish	MODERN SPECIES	9	ENSCLMG00005016465	ENSCLMG00005016466	ENSCLMG00005016467	abce1 (ENSCLMG00005016469)	anapc10 (ENSCLMG00005016481)	ENSCLMG00005016482	ENSCLMG00005016532	ENSCLMG00005016534	PPM1K (ENSCLMG00005016535)	ENSCLMG00005016538	rnf150b (ENSCLMG00005016565)	ENSCLMG00005004458	abcg2a (ENSCLMG00005004867)	ENSCLMG00005008510	ENSCLMG00005008547 ##22	tec (ENSCLMG00005008558) #22	ENSCLMG00005008577	ENSCLMG00005008578	ENSCLMG00005008579	ENSCLMG00005008580	si:ch211-133n4.4 (ENSCLMG00005008582)	ENSCLMG00005008586	ENSCLMG00005008587	ENSCLMG00005008589	ENSCLMG00005008590	ENSCLMG00005008591	vangl2 (ENSCLMG00005008592)	ENSCLMG00005008593	MYADM (ENSCLMG00005008695)	ENSCLMG00005008696	ENSCLMG00005008697
Stickleback	MODERN SPECIES	7	ENSGACG00000018628	ENSGACG00000018625	slc10a7 (ENSGACG00000018618)	ENSGACG00000018617	abce1 (ENSGACG00000018611)	anapc10 (ENSGACG00000018607)	FBXW7 (ENSGACG00000018606)	PPM1K (ENSGACG00000018600)	ENSGACG00000018596	rnf150b (ENSGACG00000018594)	ENSGACG00000018593	ENSGACG00000018591	abcg2a (ENSGACG00000018590)	ENSGACG00000018588	ENSGACG00000018586 ##22	tec (ENSGACG00000018577) #22	ENSGACG00000018567	ENSGACG00000018565	ENSGACG00000018560	ENSGACG00000018557	ENSGACG00000018555	ENSGACG00000018554	ENSGACG00000018553	ENSGACG00000018546	cnpy3 (ENSGACG00000018544)
Perciformes_a	ANCESTRAL SPECIES	18	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT01010000228954	ENSGT00940000154986.a	ENSGT00940000155128.a.b.a.a	ENSGT00950000183040.A.b.h	ENSGT00940000156633.d.b	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00940000166038	ENSGT00940000166707	ENSGT00940000155951.a ##22	ENSGT00940000155951.b #22	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d
Channel bull blenny	MODERN SPECIES	9	TMEM184C (ENSCGOG00000014441)	ednrab (ENSCGOG00000014273)	TTC29 (ENSCGOG00000014266)	slc10a7 (ENSCGOG00000014203)	ENSCGOG00000014199	ENSCGOG00000014197	ENSCGOG00000014193	ENSCGOG00000014189	PPM1K (ENSCGOG00000014186)	ENSCGOG00000014165	rnf150b (ENSCGOG00000014159)	ENSCGOG00000014143	abcg2a (ENSCGOG00000012752)	ENSCGOG00000012701	ENSCGOG00000012528 ##22	tec (ENSCGOG00000012229) #22	CORO2A (ENSCGOG00000012069)	ENSCGOG00000012060	ENSCGOG00000011995	ENSCGOG00000011992	ENSCGOG00000011989	ENSCGOG00000011986	ENSCGOG00000011983	ENSCGOG00000011978	ENSCGOG00000011969	ENSCGOG00000011967	ENSCGOG00000011963	ENSCGOG00000011943	ENSCGOG00000011942	ENSCGOG00000011939	ENSCGOG00000011936
Pike perch	MODERN SPECIES	291								ENSSLUG00000017508	ENSSLUG00000018024	RNF150 (ENSSLUG00000018054)	rnf150b (ENSSLUG00000018057)	ENSSLUG00000018060	abcg2a (ENSSLUG00000018190)	ENSSLUG00000020293	ENSSLUG00000020309 ##22	tec (ENSSLUG00000020336) #22	ENSSLUG00000020399	CORO2A (ENSSLUG00000020404)	ENSSLUG00000020422	ENSSLUG00000020455
Ballan wrasse	MODERN SPECIES	998												abcg2a (ENSLBEG00000025075)	ENSLBEG00000025109	ENSLBEG00000025154	ENSLBEG00000025244 ##22	tec (ENSLBEG00000025343) #22	ENSLBEG00000025436	CORO2A (ENSLBEG00000025514)	ENSLBEG00000025599	ENSLBEG00000025638
Spotted gar	MODERN SPECIES	670	ap1ar (ENSLOCG00000011808)	fam241a (ENSLOCG00000018052)	adh8b (ENSLOCG00000011820)	TTC39B (ENSLOCG00000011837)	snapc3 (ENSLOCG00000011852)	PSIP1 (ENSLOCG00000011863)	ENSLOCG00000011882	bnc2 (ENSLOCG00000011896)	CNTLN (ENSLOCG00000011915)	ENSLOCG00000011923	ENSLOCG00000018054	ENSLOCG00000018056	trmo (ENSLOCG00000011933)	anp32b (ENSLOCG00000011941)	coro2aa (ENSLOCG00000011950)	tec (ENSLOCG00000011964) #22	TXK (ENSLOCG00000011973) #24	ENSLOCG00000018058	NIPAL1 (ENSLOCG00000011985) #25	cnga1a (ENSLOCG00000011990) #26	NFXL1 (ENSLOCG00000012003) #27	CORIN (ENSLOCG00000012013) #29	tacr3a (ENSLOCG00000012019)	bdh2 (ENSLOCG00000012025)	SLC9B2 (ENSLOCG00000012034)	cisd2 (ENSLOCG00000012043)	ube2d3 (ENSLOCG00000012054)	manba (ENSLOCG00000012066)	NFKB1 (ENSLOCG00000012080)	SLC39A8 (ENSLOCG00000012098)	DGKQ (ENSLOCG00000012108)
Elephant shark	MODERN SPECIES	1510	scfd2 (ENSCMIG00000012479)	rasl11b (ENSCMIG00000012475)	USP46 (ENSCMIG00000012383)	spata18 (ENSCMIG00000012353) #7	sgcb (ENSCMIG00000012345) #8	dcun1d4 (ENSCMIG00000012304) #11	CWH43 (ENSCMIG00000012282) #13	ENSCMIG00000012278 #14	OCIAD1 (ENSCMIG00000012271) #15	fryl (ENSCMIG00000011534) #17	ZAR1 (ENSCMIG00000011272) #18	SLC10A4 (ENSCMIG00000011270) #19	ENSCMIG00000011267 #19	ENSCMIG00000011245	slain2 (ENSCMIG00000011224) #21	tec (ENSCMIG00000011174) #22	ENSCMIG00000011110 ##22	ENSCMIG00000011095	NIPAL1 (ENSCMIG00000011093) #25	ENSCMIG00000011090	cnga1a (ENSCMIG00000011087) #26	ENSCMIG00000011061	NFXL1 (ENSCMIG00000010935) #27	CORIN (ENSCMIG00000010880) #29	ENSCMIG00000010806 #30	commd8 (ENSCMIG00000010776) #31	GABRB1 (ENSCMIG00000010773) #32	gabra4 (ENSCMIG00000010750) #33	ENSCMIG00000010562 #35	ENSCMIG00000010469 #37	GUF1 (ENSCMIG00000010448)
Gnathostomata	ANCESTRAL SPECIES	3	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00940000161006	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00550000074940	ENSGT00940000153168.C.a.b	ENSGT00940000161041	ENSGT00940000159219
Euteleostomi	ANCESTRAL SPECIES		ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532 #7	ENSGT00390000008110 #8	ENSGT00390000014817 #9	ENSGT00940000156935 #11	ENSGT00510000048509 #13	ENSGT00530000063690.a.b.a.b #14	ENSGT00530000063690.a.b.a.a #15	ENSGT00610000086058.a #17	ENSGT00390000012305.a #18	ENSGT00950000182808.a.a.b.b #19	ENSGT00940000161006	ENSGT00390000017860.b #21	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154713.B	ENSGT00940000159531	ENSGT00940000154245.A ##32	ENSGT00940000154245.B #32	ENSGT00940000159024 #33	ENSGT00940000157266 #35	ENSGT00940000160193 #37	ENSGT00390000014316.c.a	ENSGT00550000074940
Actinopterygii	ANCESTRAL SPECIES	82	ENSGT00530000063371.C	ENSGT00940000157061.b	ENSGT00940000165836	ENSGT00940000158095	ENSGT00940000160001	ENSGT00940000156944	ENSGT00950000182934.b	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139	ENSGT00950000185681	ENSGT00940000159349	ENSGT00940000159591	ENSGT00390000002292.b	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29	ENSGT00940000156728 #30	ENSGT00390000018121 #31	ENSGT00940000154245.B #32	ENSGT00940000154713.B	ENSGT00940000159491	ENSGT00940000159531	ENSGT00940000154245.A ##32	ENSGT00940000159024 #33	ENSGT00940000157266.b #35	ENSGT00940000157266.a #35	ENSGT00940000160193 #37
Neopterygii	ANCESTRAL SPECIES	419															ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000160022 #25	ENSGT00940000156074 #26	ENSGT00940000157059 #27	ENSGT00940000157103 #29
Osteoglossocephalai	ANCESTRAL SPECIES	333									ENSGT00950000182917.a.a.a.a	ENSGT00940000154706.rb.a	ENSGT01030000235123	ENSGT01030000235336	ENSGT01060000248998	ENSGT00940000177950	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000157103 #29	ENSGT00940000157059 #27	ENSGT00940000156074.a.a #26
Clupeocephala	ANCESTRAL SPECIES	201	ENSGT00940000153173.a	ENSGT00940000154108.b.a.b	ENSGT00930000150973.B.e.a	ENSGT00940000154950.y.b	ENSGT00940000164073.b	ENSGT00940000157370.a	ENSGT00940000158059.h	ENSGT00930000151042	ENSGT00950000182917.a.a.a.a	ENSGT00940000154706.rb.a	ENSGT01030000235123	ENSGT01030000235336	ENSGT01060000248998	ENSGT00940000177950	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00390000011365.b	ENSGT00940000160368	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00390000013285.h	ENSGT00940000153745.b.f	ENSGT00940000157103 #29	ENSGT00940000157059 #27	ENSGT00940000156074.a.a #26
Otomorpha	ANCESTRAL SPECIES	149	ENSGT00940000153173.a	ENSGT00940000154108.b.a.b	ENSGT00930000150973.B.e.a	ENSGT00940000154950.y.b	ENSGT00940000164073.b	ENSGT00940000157370.a	ENSGT00940000158059.h	ENSGT00930000151042	ENSGT00950000182917.a.a.a.a	ENSGT00940000154706.rb.a	ENSGT01030000235123	ENSGT01030000235336	ENSGT01060000248998	ENSGT00940000155598.b.m.b	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00390000011365.b.w.b	ENSGT00940000160368	ENSGT00390000013285.h	ENSGT00940000157103 #29	ENSGT00940000157059 #27	ENSGT00940000156074.a.a #26	ENSGT01030000234598.a.a.b	ENSGT00390000011553	ENSGT00940000153299.b	ENSGT00940000164913	ENSGT00560000077278.a	ENSGT00940000153993.A.i	ENSGT00900000142261	ENSGT00940000157956.o.a	ENSGT00940000160057
Otophysi	ANCESTRAL SPECIES	164	ENSGT00530000064170.d	ENSGT00940000153173.a	ENSGT00940000154108.b.a.b	ENSGT00930000150973.B.e.a	ENSGT00940000154950.y.b	ENSGT00940000164073.b	ENSGT00940000157370.a	ENSGT00930000151042.w	ENSGT00950000182917.a.a.a.a	ENSGT00940000154706.rb.a	ENSGT00940000167699	ENSGT00390000005844.a.a	ENSGT00940000153942.b	ENSGT00940000155598.b.m.b	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00390000011365.b.w.b	ENSGT00940000160368	ENSGT00390000013285.h	ENSGT00940000157103 #29	ENSGT00940000157059 #27	ENSGT00940000156074.a.a #26	ENSGT01030000234598.a.a.b	ENSGT00390000011553	ENSGT00940000153299.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d
Characiphysae	ANCESTRAL SPECIES	160	ENSGT00940000160105	ENSGT01100000263484.C.b.b	ENSGT00940000167671	ENSGT01030000235000	ENSGT01030000234582.e.a	ENSGT00610000086191	ENSGT00940000167331.b	ENSGT00940000160057	ENSGT00940000157956.o.a	ENSGT00980000199088	ENSGT00940000153993.A.i	ENSGT00560000077278.a	ENSGT00940000164913	ENSGT00940000155598.b.n	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00390000011365.b.w.b	ENSGT00940000160368	ENSGT00390000013285.h	ENSGT00940000157103 #29	ENSGT00940000157059 #27	ENSGT00940000156074.a.a #26	ENSGT01030000234598.a.a.b	ENSGT00390000011553	ENSGT00940000154466.bc	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d.i
Characiphysae_b	ANCESTRAL SPECIES	177	ENSGT00940000160105	ENSGT01100000263484.C.b.b	ENSGT00940000167671	ENSGT01030000235000	ENSGT01030000234582.e.a	ENSGT00610000086191	ENSGT00940000167331.b	ENSGT00940000160057	ENSGT00940000157956.o.a	ENSGT00980000199088	ENSGT00940000153993.A.i	ENSGT00560000077278.a	ENSGT00940000164913	ENSGT00940000155598.b.n	ENSGT00940000155951.b.v #22	ENSGT00940000155951.a ##22	ENSGT00390000011365.b.w.b	ENSGT00940000160368	ENSGT00390000013285.h	ENSGT00940000157103 #29
Characoidei	ANCESTRAL SPECIES	274								ENSGT00940000160057	ENSGT00940000157956.o.a	ENSGT00980000199088	ENSGT00940000153993.A.i	ENSGT00560000077278.a	ENSGT00940000164913	ENSGT00940000155598.b.n	ENSGT00940000155951.b.v #22	ENSGT00940000155951.a ##22	ENSGT00390000011365.b.w.b	ENSGT00940000160368	ENSGT00390000013285.h	ENSGT00940000157103 #29	ENSGT00940000157059 #27	ENSGT00940000156074.a.a #26
Mexicana tetra	MODERN SPECIES	6	ENSAMXG00000020013	ENSAMXG00000020010	eif4e2rs1 (ENSAMXG00000019996)	ENSAMXG00000031401	ephb4b (ENSAMXG00000019985)	DLG4 (ENSAMXG00000030496)	ENSAMXG00000037673	ENSAMXG00000029852	ENSAMXG00000033128	ENSAMXG00000032779	MEPCE (ENSAMXG00000033849)	ENSAMXG00000019882	zgc:158659 (ENSAMXG00000019848)	CORO2A (ENSAMXG00000019819)	tec (ENSAMXG00000019793) #22	ENSAMXG00000019769 ##22	g3bp2b (ENSAMXG00000004459)	CDKL2 (ENSAMXG00000004449)	ENSAMXG00000004426	ENSAMXG00000004397	CORIN (ENSAMXG00000004363) #29	NFXL1 (ENSAMXG00000004309) #27	ENSAMXG00000037466	ENSAMXG00000034579	ENSAMXG00000038049	ENSAMXG00000035322	ENSAMXG00000005148	ENSAMXG00000031802	ENSAMXG00000010740	PLEKHG1 (ENSAMXG00000010782)	tcp1 (ENSAMXG00000010825)
Red-bellied piranha	MODERN SPECIES	1718															ENSPNAG00000021196	ENSPNAG00000021190 ##22	g3bp2b (ENSPNAG00000021170)	ENSPNAG00000021126	ENSPNAG00000021111
Electric eel	MODERN SPECIES	511	ENSEEEG00000005155	ENSEEEG00000005158	ubac2 (ENSEEEG00000005160)	gpr183b (ENSEEEG00000005163)	dachc (ENSEEEG00000005165)	mzt1 (ENSEEEG00000005168)	bora (ENSEEEG00000005169)	DIS3 (ENSEEEG00000005181)	metap1d (ENSEEEG00000005216)	dlx2b (ENSEEEG00000005219)	itga6b (ENSEEEG00000005240)	ENSEEEG00000005483	eef1a1b (ENSEEEG00000005554)	ENSEEEG00000006098	ENSEEEG00000006102 #22	ENSEEEG00000006105 ##22	g3bp2b (ENSEEEG00000006111)	CDKL2 (ENSEEEG00000006115)
Channel catfish	MODERN SPECIES	6	ENSIPUG00000003098	ddx58 (ENSIPUG00000003114)	ENSIPUG00000003179	ENSIPUG00000003183	AIMP1 (ENSIPUG00000003203)	ENSIPUG00000003218	sgms2b (ENSIPUG00000003241)	cfi (ENSIPUG00000003259)	ENSIPUG00000003339	ENSIPUG00000003363	ENSIPUG00000003374	MEPCE (ENSIPUG00000003387)	zgc:158659 (ENSIPUG00000003405)	ENSIPUG00000003441	tec (ENSIPUG00000003515) #22	ENSIPUG00000003538 ##22	g3bp2 (ENSIPUG00000003561)	ENSIPUG00000003594	ENSIPUG00000003611	CORIN (ENSIPUG00000003632) #29	ENSIPUG00000003676 #27	CNGA1 (ENSIPUG00000003687) #26	ENSIPUG00000003703 #27	ENSIPUG00000003719	tfr2 (ENSIPUG00000003730)	ctc1 (ENSIPUG00000003776)	HMGB2 (ENSIPUG00000003812)	ENSIPUG00000003824	ENSIPUG00000003836	ENSIPUG00000003853	eif4e2rs1 (ENSIPUG00000003906)
Cyprinoidei	ANCESTRAL SPECIES	171					ENSGT00940000160860	ENSGT01030000234629.A	ENSGT00610000086191	ENSGT00940000167331.b	ENSGT00940000160057	ENSGT00940000157956.o.a	ENSGT00900000142261	ENSGT00940000153993.A.i	ENSGT00940000164913	ENSGT00940000155598.b.n	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00390000011365.b.w.b	ENSGT00940000160368	ENSGT00390000013285.h	ENSGT00940000157103 #29	ENSGT00940000157059 #27	ENSGT00940000156074.a.a #26
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	1241															ENSGT00940000155951.b.y #22	ENSGT00940000155951.a.a ##22	ENSGT00390000011365.b.w.b.b
Cyprininae_a	ANCESTRAL SPECIES	912															ENSGT00940000155951.b.y #22	ENSGT00940000155951.a.a ##22	ENSGT00390000011365.b.w.b.b
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	2051												MEPCE (ENSSGRG00000009576)	ENSSGRG00000009455 #22	ENSSGRG00000009446 #22	ENSSGRG00000009444 ##22	ENSSGRG00000009440 ##22	ENSSGRG00000009437
Golden-line barbel	MODERN SPECIES	2051													MEPCE (ENSSGRG00000009576)	ENSSGRG00000009455 #22	ENSSGRG00000009446 #22	ENSSGRG00000009444 ##22	ENSSGRG00000009440 ##22	ENSSGRG00000009437
Common carp reference	MODERN SPECIES	49	ENSCCRG00000068791	ENSCCRG00000064331	ENSCCRG00000059668	trappc1 (ENSCCRG00000060407)	psmb6 (ENSCCRG00000040903)	ENSCCRG00000078406	ENSCCRG00000011683	ENSCCRG00000024958	eif4e2rs1 (ENSCCRG00000074656)	ephb4b (ENSCCRG00000067099)	ENSCCRG00000060917	ENSCCRG00000048682	zgc:158659 (ENSCCRG00000063854)	tec (ENSCCRG00000070107) #22	ENSCCRG00000060952	ENSCCRG00000082681 ##22	ENSCCRG00000027076	ENSCCRG00000027839 #26
Cyprininae	ANCESTRAL SPECIES	735													ENSGT00940000153993.A.i.c.a	ENSGT00940000155598.b.n	ENSGT00940000155951.b.x.a.a #22	ENSGT00940000155951.a.b ##22	ENSGT00390000011365.b.w.b.a	ENSGT00940000160368	ENSGT00390000013285.h	ENSGT00940000155512.h	ENSGT00940000157103 #29	ENSGT00940000157059 #27	ENSGT00940000156074.a.a.b #26
Cyprininae_a	ANCESTRAL SPECIES	572													ENSGT00940000153993.A.i.c.a	ENSGT00940000155598.b.n	ENSGT00940000155951.b.x.a.a #22	ENSGT00940000155951.a.b ##22	ENSGT00390000011365.b.w.b.a	ENSGT00940000160368	ENSGT00390000013285.h	ENSGT00940000155512.h	ENSGT00940000157103 #29	ENSGT00940000157059 #27	ENSGT00940000156074.a.a.b #26
Common carp reference	MODERN SPECIES	11	eno3 (ENSCCRG00000058869)	pfn1 (ENSCCRG00000065450)	ENSCCRG00000064074	psmb6 (ENSCCRG00000044556)	ENSCCRG00000074993	actl6b (ENSCCRG00000011109)	ENSCCRG00000071706	eif4e2rs1 (ENSCCRG00000065091)	ephb4b (ENSCCRG00000058750)	ENSCCRG00000061617	ENSCCRG00000065258	ENSCCRG00000074182	ENSCCRG00000016846	ENSCCRG00000011271	tec (ENSCCRG00000058209) #22	ENSCCRG00000028570 ##22	ENSCCRG00000059118	ENSCCRG00000054677	ENSCCRG00000070530	ENSCCRG00000068001	ENSCCRG00000070630	CORIN (ENSCCRG00000019141) #29	ENSCCRG00000005645 #27	CNGA1 (ENSCCRG00000005635) #26	ENSCCRG00000041278
Golden-line barbel	MODERN SPECIES	1583														ENSSGRG00000017807	zgc:158659 (ENSSGRG00000017811)	ENSSGRG00000018267 ##22	ENSSGRG00000018843	CORIN (ENSSGRG00000018849) #29	ENSSGRG00000018933	NFXL1 (ENSSGRG00000018934) #27
Goldfish	MODERN SPECIES	42	CAMTA2 (ENSCARG00000044795)	zgc:85858 (ENSCARG00000044826)	ENSCARG00000044836	ENO3 (ENSCARG00000044870)	pfn1 (ENSCARG00000045144)	trappc1 (ENSCARG00000045162)	psmb6 (ENSCARG00000045178)	ENSCARG00000045204	actl6b (ENSCARG00000046153)	ENSCARG00000046473	ENSCARG00000046517	ENSCARG00000046525	MEPCE (ENSCARG00000046539)	ENSCARG00000046556	tec (ENSCARG00000046631) #22	ENSCARG00000047154 ##22	g3bp2b (ENSCARG00000047407)	ENSCARG00000047510	CORIN (ENSCARG00000047657) #29	aimp1b (ENSCARG00000047730)	sgms2b (ENSCARG00000018166)	ENSCARG00000018179	ENSCARG00000018208	ENSCARG00000018231	ENSCARG00000018517	ENSCARG00000018527	ENSCARG00000018538	ENSCARG00000018568	ctc1 (ENSCARG00000018571)	tfr2 (ENSCARG00000018584)	ENSCARG00000018601
Zebrafish	MODERN SPECIES	15	itchb (ENSDARG00000099199)	ENSDARG00000100939	slc10a7 (ENSDARG00000104508)	otud4 (ENSDARG00000077810)	abce1 (ENSDARG00000007216)	anapc10 (ENSDARG00000090152)	ENSDARG00000054548	rnf150b (ENSDARG00000009524)	ENSDARG00000088882	PPM1K (ENSDARG00000076011)	ENSDARG00000095911	CNGA1 (ENSDARG00000012125) #26	NFXL1 (ENSDARG00000070127) #27	CORIN (ENSDARG00000101281) #29	ENSDARG00000043918	ENSDARG00000015068 ##22	g3bp2b (ENSDARG00000074572)	tec (ENSDARG00000098477) #22	ENSDARG00000095969	zgc:158659 (ENSDARG00000060597)	MEPCE (ENSDARG00000035771)	ENSDARG00000095809	DLG4 (ENSDARG00000039385)	ephb4b (ENSDARG00000027112)	eif4e2rs1 (ENSDARG00000015835)	ENSDARG00000095799	SPSB2 (ENSDARG00000088985)	actl6b (ENSDARG00000034107)	ENSDARG00000075024	psmb6 (ENSDARG00000002240)	trappc1 (ENSDARG00000039005)
Clupeiformes	ANCESTRAL SPECIES	267							ENSGT00930000150973.B.e.a	ENSGT00940000154950.y.b	ENSGT00990000205111	ENSGT00940000157370.a	ENSGT00940000158059.h	ENSGT00930000151042	ENSGT00950000182917.a.a.a.a	ENSGT00940000155598.b.m.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00390000011365.b.w.b	ENSGT00940000160368	ENSGT00390000013285.h	ENSGT00940000157103 #29	ENSGT00940000157059 #27	ENSGT00940000156074.a.a #26	ENSGT01030000234598.a.a.b	ENSGT00390000011553	ENSGT00940000154466.bc	ENSGT00940000164913	ENSGT00560000077278.a	ENSGT00940000153993.A.i
Atlantic herring	MODERN SPECIES	9	aimp1b (ENSCHAG00000007267)	ENSCHAG00000007420	sgms2b (ENSCHAG00000007453)	ENSCHAG00000007461	ENSCHAG00000007475	ENSCHAG00000007625	ENSCHAG00000007650	ENSCHAG00000008213	ENSCHAG00000008284	ENSCHAG00000008280	ENSCHAG00000008237	ENSCHAG00000008302	ENSCHAG00000008321	ENSCHAG00000008509	ENSCHAG00000008610 #22	ENSCHAG00000009348 ##22	g3bp2b (ENSCHAG00000009636)	ENSCHAG00000009658	ENSCHAG00000009896	ENSCHAG00000011038	CORIN (ENSCHAG00000011548) #29	ENSCHAG00000013139 #27	CNGA1 (ENSCHAG00000014018) #26	tfr2 (ENSCHAG00000014039)	ctc1 (ENSCHAG00000014178)	HMGB2 (ENSCHAG00000014204)	zgc:158659 (ENSCHAG00000014231)	ENSCHAG00000014343	MEPCE (ENSCHAG00000014353)	ENSCHAG00000014360	ENSCHAG00000014488
Denticle herring	MODERN SPECIES		ENSDCDG00000000636	ENSDCDG00000000631	zgc:172075 (ENSDCDG00000000628)	ENSDCDG00000000622	ENSDCDG00000000617	sgms2b (ENSDCDG00000000613)	ENSDCDG00000000608	ENSDCDG00000000386	ENSDCDG00000000161	ENSDCDG00000000152	ENSDCDG00000000145	ENSDCDG00000020017	ENSDCDG00000020014	ENSDCDG00000020010	tec (ENSDCDG00000019913) #22	ENSDCDG00000019872 ##22	ENSDCDG00000019595	tfr2 (ENSDCDG00000019567)	ctc1 (ENSDCDG00000019558)	HMGB2 (ENSDCDG00000019550)	zgc:158659 (ENSDCDG00000019538)	MEPCE (ENSDCDG00000019529)	KCNAB3 (ENSDCDG00000019435)	trappc1 (ENSDCDG00000019420)	psmb6 (ENSDCDG00000019417)	KIF1C (ENSDCDG00000017321)	actl6b (ENSDCDG00000017283)	ENSDCDG00000017274	eif4e2rs1 (ENSDCDG00000017269)	slc12a9 (ENSDCDG00000017263)	ENSDCDG00000017261
Euteleosteomorpha	ANCESTRAL SPECIES	156		ENSGT00940000155973.b.c	ENSGT00940000155927	ENSGT00940000165274.a	ENSGT00510000047351.b	ENSGT00390000011679	ENSGT00940000157467	ENSGT00940000158122	ENSGT00390000013075.b	ENSGT00940000156323.c.b	ENSGT00940000155905.b	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000160368	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00940000156733	ENSGT00940000162501	ENSGT00390000013722	ENSGT00940000159922.a.b	ENSGT00940000163277	ENSGT00390000011932	ENSGT00390000008611	ENSGT01100000263512.a.a.b.a
Acanthomorphata	ANCESTRAL SPECIES	172												ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000154986.a	ENSGT00950000182936.a.a.b.b	ENSGT00940000180552	ENSGT00940000155694.h	ENSGT00390000013722	ENSGT00940000178504
Euacanthomorphacea	ANCESTRAL SPECIES	3	ENSGT00940000156171.g	ENSGT00390000017043	ENSGT00490000044733	ENSGT00940000157587.k	ENSGT00940000156801.h	ENSGT00940000158403	ENSGT00940000157297	ENSGT00940000156733	ENSGT00940000162501	ENSGT00940000158660	ENSGT00930000150973.B.f	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000154986.a	ENSGT01010000228954	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000178415	ENSGT00940000159922.a.b
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	9	ENSMMDG00005002040	ENSMMDG00005002369	SMAD1 (ENSMMDG00005002381)	slc10a7 (ENSMMDG00005002396)	ednrab (ENSMMDG00005002420)	TMEM184C (ENSMMDG00005004605)	sh3gl2b (ENSMMDG00005004612)	ENSMMDG00005004616	ENSMMDG00005004621	CORO2A (ENSMMDG00005012505)	ENSMMDG00005012515	ENSMMDG00005012516	ENSMMDG00005012519	ENSMMDG00005012520	tec (ENSMMDG00005012524) #22	ENSMMDG00005012545 ##22	ENSMMDG00005012548 ##22	ENSMMDG00005012606	ENSMMDG00005012608	ENSMMDG00005012610	abcg2a (ENSMMDG00005012651)	PPM1K (ENSMMDG00005015933)	ENSMMDG00005015967	ENSMMDG00005015971	rnf150b (ENSMMDG00005015976)	ENSMMDG00005015978	ENSMMDG00005015999	ENSMMDG00005016001	ENSMMDG00005016002	ENSMMDG00005016006	ENSMMDG00005016040
Pinecone sodierfish	MODERN SPECIES	9	ENSMMDG00005002369	SMAD1 (ENSMMDG00005002381)	slc10a7 (ENSMMDG00005002396)	ednrab (ENSMMDG00005002420)	TMEM184C (ENSMMDG00005004605)	sh3gl2b (ENSMMDG00005004612)	ENSMMDG00005004616	ENSMMDG00005004621	CORO2A (ENSMMDG00005012505)	ENSMMDG00005012515	ENSMMDG00005012516	ENSMMDG00005012519	ENSMMDG00005012520	tec (ENSMMDG00005012524) #22	ENSMMDG00005012545 ##22	ENSMMDG00005012548 ##22	ENSMMDG00005012606	ENSMMDG00005012608	ENSMMDG00005012610	abcg2a (ENSMMDG00005012651)	PPM1K (ENSMMDG00005015933)	ENSMMDG00005015967	ENSMMDG00005015971	rnf150b (ENSMMDG00005015976)	ENSMMDG00005015978	ENSMMDG00005015999	ENSMMDG00005016001	ENSMMDG00005016002	ENSMMDG00005016006	ENSMMDG00005016040	ENSMMDG00005016042
Percomorphaceae	ANCESTRAL SPECIES	63												ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000154986.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000178415	ENSGT00940000159922.a.b	ENSGT00940000163277
Percomorphaceae_B	ANCESTRAL SPECIES	19	ENSGT00940000155905.b	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000160928.n.b.c.b	ENSGT01050000244843.c.a.b.a.a.a.b.a.a.b.a	ENSGT01050000244843.c.a.b.a.a.a.b.a.b.b.b.a.a.a	ENSGT00980000199186	ENSGT00940000169316	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j	ENSGT01000000221658	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000178415
Ovalentaria	ANCESTRAL SPECIES	20	ENSGT00970000193619	ENSGT00940000156323.c.b	ENSGT00390000005182.j	ENSGT00390000013075.b	ENSGT00940000155905.b	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000160928.n.b.c.b	ENSGT00940000169316	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b
Ovalentaria_B	ANCESTRAL SPECIES	19									ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000156063.l
Pomacentridae	ANCESTRAL SPECIES	28								ENSGT00940000163711.b.e.b.a.b	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT01070000253822.D.b	ENSGT00530000063854	ENSGT00940000161036.A.e	ENSGT00940000157146.a.a	ENSGT00390000017890.b.b	ENSGT00940000159617	ENSGT00800000124172.i	ENSGT00940000160640	ENSGT00510000047770.c.b	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00940000154658.a.f	ENSGT00940000154658.a.e
Pomacentridae_A	ANCESTRAL SPECIES	22						ENSGT00950000183127.c.b.d.a.b.a.a.a.a.h.b	ENSGT00940000161847.b.a.e.b.mb.b	ENSGT00940000163711.b.e.b.a.b	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b.k.a	ENSGT01030000234592.A.a.b.j.n	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT01090000260059.a.b.b.b.a.d.a.b	ENSGT01070000253822.D.b	ENSGT00530000063854	ENSGT00940000161036.A.e	ENSGT00940000157146.a.a	ENSGT00390000017890.b.b	ENSGT00940000159617	ENSGT00800000124172.i	ENSGT00940000160640	ENSGT00510000047770.c.b	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00940000154658.a.f
Amphiprion	ANCESTRAL SPECIES	96	ENSGT00940000161814.g.b.d.b.a	ENSGT01050000244843.c.a.b.a.a.a.a.a.a	ENSGT01050000244843.c.b.a.a	ENSGT00990000204085	ENSGT01030000234598.a.a.b	ENSGT00950000183127.c.b.d.a.b.a.a.a.a.h.b.b	ENSGT00940000161847.b.a.e.b.mb.b	ENSGT00940000163711.b.e.b.a.b	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b.k.a	ENSGT01030000234592.A.a.b.j.n	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT01090000260059.a.b.b.b.a.d.a.b	ENSGT01070000253822.D.b	ENSGT00530000063854	ENSGT00940000161036.A.e	ENSGT00940000157146.a.a	ENSGT00390000017890.b.b	ENSGT00940000159617	ENSGT00800000124172.i	ENSGT00940000160640	ENSGT00510000047770.c.b	ENSGT00940000156823.e	ENSGT00390000017010	ENSGT00940000154658.a.f
Clown anemonefish	MODERN SPECIES	629													CORO2A (ENSAOCG00000008045)	zgc:158445 (ENSAOCG00000008016)	tec (ENSAOCG00000007988) #22	ENSAOCG00000007930 ##22	ENSAOCG00000007890	abcg2a (ENSAOCG00000007876)	ENSAOCG00000007852	ENSAOCG00000007839	mfsd8 (ENSAOCG00000007820)	ENSAOCG00000000431	SGCZ (ENSAOCG00000007780)	ENSAOCG00000007764	RBPMS (ENSAOCG00000007731)	FABP2 (ENSAOCG00000007719)
Orange clownfish	MODERN SPECIES	15	ENSAPEG00000023964	ENSAPEG00000023955	ENSAPEG00000023950	ENSAPEG00000023946	ENSAPEG00000023936	tfr2 (ENSAPEG00000023927)	ENSAPEG00000023913	ENSAPEG00000023898	ENSAPEG00000023892	ENSAPEG00000023872	ENSAPEG00000023860	CORO2A (ENSAPEG00000023850)	ENSAPEG00000023844	ENSAPEG00000023828	tec (ENSAPEG00000023770) #22	ENSAPEG00000023733 ##22	ENSAPEG00000023702	ENSAPEG00000023676	abcg2a (ENSAPEG00000023653)	ENSAPEG00000023637	mfsd8 (ENSAPEG00000023620)	ENSAPEG00000023603	SGCZ (ENSAPEG00000023566)	ENSAPEG00000023550	RBPMS (ENSAPEG00000023543)	FABP2 (ENSAPEG00000023534)	DMRTA1 (ENSAPEG00000023525)	ENSAPEG00000023497	elavl2 (ENSAPEG00000023474)	CAAP1 (ENSAPEG00000023464)	ENSAPEG00000023386
Spiny chromis	MODERN SPECIES	111						ENSAPOG00000023144	ENSAPOG00000023120	ENSAPOG00000023069	ENSAPOG00000023054	ENSAPOG00000023010	ENSAPOG00000022996	CORO2A (ENSAPOG00000022981)	ENSAPOG00000022953	ENSAPOG00000022923	tec (ENSAPOG00000022888) #22	ENSAPOG00000022839 ##22	ENSAPOG00000022651	abcg2a (ENSAPOG00000022542)	ENSAPOG00000022526	ENSAPOG00000022499	mfsd8 (ENSAPOG00000022463)	ENSAPOG00000022403	SGCZ (ENSAPOG00000022386)	ENSAPOG00000022362	RBPMS (ENSAPOG00000022304)	FABP2 (ENSAPOG00000022284)	DMRTA1 (ENSAPOG00000000631)	ENSAPOG00000022213	elavl2 (ENSAPOG00000022121)	CAAP1 (ENSAPOG00000022103)
Bicolor damselfish	MODERN SPECIES	932														ENSSPAG00000005291	tec (ENSSPAG00000005257) #22	ENSSPAG00000005136 ##22	ENSSPAG00000005117	ENSSPAG00000005019	ENSSPAG00000004993	abcg2a (ENSSPAG00000004957)	ENSSPAG00000004945	mfsd8 (ENSSPAG00000004887)	ENSSPAG00000004843	SGCZ (ENSSPAG00000004832)	ENSSPAG00000004804	ENSSPAG00000004798	RBPMS (ENSSPAG00000004777)	FABP2 (ENSSPAG00000004757)	ENSSPAG00000004740	ENSSPAG00000004714
Cichlidae	ANCESTRAL SPECIES	57	ENSGT00990000203723.b.b	ENSGT00940000166122	ENSGT00940000164842	ENSGT00940000157904.b	ENSGT00940000158972	ENSGT00390000001134.b.`b.b	ENSGT00390000014072.A	ENSGT01060000248594.e.a.n	ENSGT00940000156801.g	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00940000163999.b.a.b.a	ENSGT00940000163999.b.a.b.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.b.a.b.a.c.b.b	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b
Midas cichlid	MODERN SPECIES	898														ENSACIG00000007813	tec (ENSACIG00000007859) #22	ENSACIG00000007951 ##22	ENSACIG00000007967	abcg2a (ENSACIG00000008015)	PPM1K (ENSACIG00000008048)	ENSACIG00000008069	ENSACIG00000008143	ENSACIG00000008415	ENSACIG00000008746	rnf150b (ENSACIG00000008782)
Pseudocrenilabrinae	ANCESTRAL SPECIES	45	ENSGT00990000203723.b.b	ENSGT00940000166122	ENSGT00940000164842	ENSGT00940000157904.b	ENSGT00940000158972	ENSGT00390000001134.b.`b.b	ENSGT00390000014072.A	ENSGT01060000248594.e.a.n	ENSGT00940000156801.g	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01050000244866.D.a.d.d	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000163999.b.a.b.a.a	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.b.a.b.a.c.b.b	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000156063.l	ENSGT00940000163277	ENSGT00390000011932	ENSGT00390000008611
Nile tilapia	MODERN SPECIES	15	ENSONIG00000041850	ENSONIG00000039070	ENSONIG00000011608	ENSONIG00000041917	ENSONIG00000011610	ENSONIG00000011613	CORO2A (ENSONIG00000011617)	ENSONIG00000031550	ENSONIG00000029362	ENSONIG00000011621	ENSONIG00000032017	ENSONIG00000030563	ENSONIG00000028152	ENSONIG00000042833	tec (ENSONIG00000011633) #22	ENSONIG00000011645 ##22	ENSONIG00000011659	abcg2a (ENSONIG00000011661)	PPM1K (ENSONIG00000011668)	ENSONIG00000030781	ENSONIG00000011671	rnf150b (ENSONIG00000037071)	ENSONIG00000028669	ENSONIG00000019534	ENSONIG00000011675	ENSONIG00000033222	ENSONIG00000031426	ENSONIG00000036342	ENSONIG00000030653	ENSONIG00000011683	ENSONIG00000011685
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	63											ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000163999.b.a.b.a.a	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.b.a.b.a.c.b.b	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000156063.l	ENSGT00940000163277	ENSGT00390000011932	ENSGT00940000174503
Haplochromini	ANCESTRAL SPECIES	71										ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01050000244866.D.a.d.c	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038.c	ENSGT00940000156633.d.b	ENSGT00940000163999.b.a.b.a.a.a.b	ENSGT00940000163999.b.a.b.a.b	ENSGT00940000163999.b.a.b.b	ENSGT00940000156171.h.h.b	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.b.a.b.a.c.b.b	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000156063.l
Burton s mouthbrooder	DUPLICATION
Burton s mouthbrooder	MODERN SPECIES	993															tec (ENSHBUG00000015114) #22	ENSHBUG00000015006 ##22	ENSHBUG00000014991 ##22	ENSHBUG00000014975	abcg2a (ENSHBUG00000014939)	ENSHBUG00000014582	ENSHBUG00000014569	ENSHBUG00000014518
Burton s mouthbrooder	MODERN SPECIES	993														tec (ENSHBUG00000015114) #22	ENSHBUG00000015006 ##22	ENSHBUG00000014991 ##22	ENSHBUG00000014975	abcg2a (ENSHBUG00000014939)	ENSHBUG00000014582	ENSHBUG00000014569	ENSHBUG00000014518
Haplochromini_A	ANCESTRAL SPECIES	77										ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01050000244866.D.a.d.c	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038.c	ENSGT00940000156633.d.b	ENSGT00940000163999.b.a.b.a.a.a.b	ENSGT00940000163999.b.a.b.a.b	ENSGT00940000163999.b.a.b.b	ENSGT00940000156171.h.h.b	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.b.a.b.a.c.b.b	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000156063.l
P. nyererei	DUPLICATION
P. nyererei	MODERN SPECIES	663									ENSPNYG00000006223	ENSPNYG00000006247	CORO2A (ENSPNYG00000006260)	ENSPNYG00000006296	ENSPNYG00000006388	tec (ENSPNYG00000006415) #22	ENSPNYG00000006467 ##22	ENSPNYG00000006473 ##22	ENSPNYG00000006499	abcg2a (ENSPNYG00000006527)	ENSPNYG00000006546	ENSPNYG00000006559	ENSPNYG00000006668	ENSPNYG00000007202	ENSPNYG00000007556	rnf150b (ENSPNYG00000007563)
P. nyererei	MODERN SPECIES	663										ENSPNYG00000006223	ENSPNYG00000006247	CORO2A (ENSPNYG00000006260)	ENSPNYG00000006296	ENSPNYG00000006388	tec (ENSPNYG00000006415) #22	ENSPNYG00000006467 ##22	ENSPNYG00000006473 ##22	ENSPNYG00000006499	abcg2a (ENSPNYG00000006527)	ENSPNYG00000006546	ENSPNYG00000006559	ENSPNYG00000006668	ENSPNYG00000007202	ENSPNYG00000007556	rnf150b (ENSPNYG00000007563)
Haplochromini_B	ANCESTRAL SPECIES	105										ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01050000244866.D.a.d.c	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038.c	ENSGT00940000156633.d.b	ENSGT00940000163999.b.a.b.a.a.a.b	ENSGT00940000163999.b.a.b.a.a.a.a	ENSGT00940000163999.b.a.b.a.b	ENSGT00940000163999.b.a.b.b	ENSGT00940000156171.h.h.b	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.b.a.b.b.a.b.a.a.a	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	72										ENSMZEG00005019572	ENSMZEG00005019583	CORO2A (ENSMZEG00005019589)	ENSMZEG00005019607	ENSMZEG00005019620	tec (ENSMZEG00005019633) #22	ENSMZEG00005019645 ##22	ENSMZEG00005019650 ##22	ENSMZEG00005019656	abcg2a (ENSMZEG00005019664)	PPM1K (ENSMZEG00005019670)	ENSMZEG00005019700	ENSMZEG00005021677
Zebra mbuna	MODERN SPECIES	72									ENSMZEG00005019572	ENSMZEG00005019583	CORO2A (ENSMZEG00005019589)	ENSMZEG00005019607	ENSMZEG00005019620	tec (ENSMZEG00005019633) #22	ENSMZEG00005019645 ##22	ENSMZEG00005019650 ##22	ENSMZEG00005019656	abcg2a (ENSMZEG00005019664)	PPM1K (ENSMZEG00005019670)	ENSMZEG00005019700	ENSMZEG00005021677
Eastern happy	DUPLICATION
Eastern happy	MODERN SPECIES	22	ENSACLG00000016077	ENSACLG00000015959	ENSACLG00000015913	ENSACLG00000015791	ENSACLG00000015782	ENSACLG00000015765	zmat2 (ENSACLG00000015635)	ENSACLG00000015621	ENSACLG00000015573	CORO2A (ENSACLG00000015546)	ENSACLG00000015511	ENSACLG00000015455	ENSACLG00000015431	ENSACLG00000015425	tec (ENSACLG00000015323) #22	ENSACLG00000015309 ##22	ENSACLG00000015292 ##22	ENSACLG00000015270	abcg2a (ENSACLG00000015231)	PPM1K (ENSACLG00000015210)	ENSACLG00000015201	ENSACLG00000014819	ENSACLG00000013477	ENSACLG00000012888	ENSACLG00000012866	rnf150b (ENSACLG00000012848)	ENSACLG00000012840	ENSACLG00000012823	ENSACLG00000012815	ENSACLG00000012680	ENSACLG00000012633
Eastern happy	MODERN SPECIES	22	ENSACLG00000015959	ENSACLG00000015913	ENSACLG00000015791	ENSACLG00000015782	ENSACLG00000015765	zmat2 (ENSACLG00000015635)	ENSACLG00000015621	ENSACLG00000015573	CORO2A (ENSACLG00000015546)	ENSACLG00000015511	ENSACLG00000015455	ENSACLG00000015431	ENSACLG00000015425	tec (ENSACLG00000015323) #22	ENSACLG00000015309 ##22	ENSACLG00000015292 ##22	ENSACLG00000015270	abcg2a (ENSACLG00000015231)	PPM1K (ENSACLG00000015210)	ENSACLG00000015201	ENSACLG00000014819	ENSACLG00000013477	ENSACLG00000012888	ENSACLG00000012866	rnf150b (ENSACLG00000012848)	ENSACLG00000012840	ENSACLG00000012823	ENSACLG00000012815	ENSACLG00000012680	ENSACLG00000012633	ENSACLG00000012621
Lyretail cichlid	MODERN SPECIES	442											ENSNBRG00000001053	ENSNBRG00000001082	CORO2A (ENSNBRG00000001089)	tec (ENSNBRG00000001125) #22	ENSNBRG00000001186	ENSNBRG00000001194 ##22	ENSNBRG00000001226	abcg2a (ENSNBRG00000001290)	PPM1K (ENSNBRG00000001303)	ENSNBRG00000001329	ENSNBRG00000001501	ENSNBRG00000001512	ENSNBRG00000001522	ENSNBRG00000001534	ENSNBRG00000001577	ENSNBRG00000002019	ENSNBRG00000002031	ENSNBRG00000002067	ENSNBRG00000002079	ENSNBRG00000002175	ENSNBRG00000002191
Atherinomorphae	ANCESTRAL SPECIES	22	ENSGT00940000154895.a.a	ENSGT01100000263529.a.a.a.a.b.c.a	ENSGT00940000155201.d	ENSGT01100000263512.a.a.b.a	ENSGT00390000008611	ENSGT00390000011932	ENSGT00940000163277	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000169316	ENSGT00940000160928.n.b.c.b	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000155905.b	ENSGT00390000013075.b	ENSGT00390000005182.j
Oryzias	ANCESTRAL SPECIES	21	ENSGT00940000155201.d	ENSGT01100000263512.a.a.b.a	ENSGT00940000174503	ENSGT00390000011932	ENSGT00940000163277	ENSGT00940000156063.l	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT01090000260059.a.b.b.a.a.b.b.d.a	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT01090000260059.a.b.b.b.b.f.a.a.c.a	ENSGT01030000234592.A.a.b.j.j	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT01070000253760.b.a.a.a.b.a.a.b.a.a.a	ENSGT01030000234592.A.a.b.j.i.a	ENSGT01030000234592.A.a.b.j.i.b	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000163711.b.e.a.a.a	ENSGT01080000257449
Oryzias_a	ANCESTRAL SPECIES	40	ENSGT00940000155201.d	ENSGT01100000263512.a.a.b.a	ENSGT00390000011932	ENSGT00940000163277	ENSGT00940000156063.l	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT01090000260059.a.b.b.a.a.b.b.d.a	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT01090000260059.a.b.b.b.b.f.a.a.c.a	ENSGT01030000234592.A.a.b.j.j.c	ENSGT01030000234592.A.a.b.j.j.d	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000160368	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT01070000253760.b.a.a.a.b.a.a.b.a.b.a.b.b.a.a	ENSGT01070000253760.b.a.a.a.b.a.a.b.a.a.a	ENSGT01030000234592.A.a.b.j.i.a	ENSGT01030000234592.A.a.b.j.i.b	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00990000204036.c.b.b
Japanese Medaka HdrR	MODERN SPECIES	9	ednrab (ENSORLG00000027065)	slc10a7 (ENSORLG00000002993)	ENSORLG00000023482	ENSORLG00000023060	ENSORLG00000029809	abce1 (ENSORLG00000002875)	anapc10 (ENSORLG00000002856)	ENSORLG00000030336	ENSORLG00000021793	ENSORLG00000002841	ENSORLG00000030607	ENSORLG00000002838	ENSORLG00000002808	ENSORLG00000025136	ENSORLG00000026972	ENSORLG00000002748 ##22	tec (ENSORLG00000002788) #22	ENSORLG00000026536	abcg2a (ENSORLG00000002735)	ENSORLG00000002701	rnf150b (ENSORLG00000002672)	ENSORLG00000002665	ENSORLG00000023533	ENSORLG00000030403	ENSORLG00000027381	ENSORLG00000029955	ENSORLG00000016854	ENSORLG00000003160	ENSORLG00000025474	ENSORLG00000022271	ENSORLG00000025979
Chinese medaka	MODERN SPECIES	975															tec (ENSOSIG00000018123) #22	ENSOSIG00000018062 ##22	ENSOSIG00000018054 #22	abcg2a (ENSOSIG00000016811)	PPM1K (ENSOSIG00000016753)	rnf150b (ENSOSIG00000016751)	ENSOSIG00000016750
Oryzias_b	ANCESTRAL SPECIES	18	ENSGT00940000174503	ENSGT00390000011932	ENSGT00940000163277	ENSGT00940000156063.l	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT01090000260059.a.b.b.a.a.b.b.d.a	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT01090000260059.a.b.b.b.b.f.a.a.c.a	ENSGT01030000234592.A.a.b.j.j.a.a	ENSGT01030000234592.A.a.b.j.j.b	ENSGT01030000234592.A.a.b.j.j.a.b	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000156171.h	ENSGT01090000260059.a.b.b.b.b.f.a.b	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT01070000253760.b.a.a.a.b.a.a.b.a.a.a.b	ENSGT01070000253760.b.a.a.a.b.a.a.b.a.a.a.a.b	ENSGT01030000234592.A.a.b.j.i.a.a	ENSGT01030000234592.A.a.b.j.i.b.a	ENSGT01030000234592.A.a.b.j.i.b.b	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a
Indian medaka	DUPLICATION
Indian medaka	MODERN SPECIES	19	ENSOMEG00000001308	ENSOMEG00000001305	TMEM184C (ENSOMEG00000023631)	ednrab (ENSOMEG00000023612)	ENSOMEG00000023606	slc10a7 (ENSOMEG00000023585)	ENSOMEG00000000729	abce1 (ENSOMEG00000023486)	anapc10 (ENSOMEG00000023452)	ENSOMEG00000023445	ENSOMEG00000023439	ENSOMEG00000023430	ENSOMEG00000023425	ENSOMEG00000023417	tec (ENSOMEG00000023411) #22	ENSOMEG00000023395 ##22	ENSOMEG00000023385 ##22	ENSOMEG00000023381	abcg2a (ENSOMEG00000023363)	PPM1K (ENSOMEG00000023318)	rnf150b (ENSOMEG00000023296)	ENSOMEG00000023286	ENSOMEG00000000796	ENSOMEG00000023273	ENSOMEG00000023244	ENSOMEG00000023200	ENSOMEG00000023181	ENSOMEG00000023177	ENSOMEG00000023164	ENSOMEG00000023132	ENSOMEG00000023123
Indian medaka	MODERN SPECIES	19	ENSOMEG00000001305	TMEM184C (ENSOMEG00000023631)	ednrab (ENSOMEG00000023612)	ENSOMEG00000023606	slc10a7 (ENSOMEG00000023585)	ENSOMEG00000000729	abce1 (ENSOMEG00000023486)	anapc10 (ENSOMEG00000023452)	ENSOMEG00000023445	ENSOMEG00000023439	ENSOMEG00000023430	ENSOMEG00000023425	ENSOMEG00000023417	tec (ENSOMEG00000023411) #22	ENSOMEG00000023395 ##22	ENSOMEG00000023385 ##22	ENSOMEG00000023381	abcg2a (ENSOMEG00000023363)	PPM1K (ENSOMEG00000023318)	rnf150b (ENSOMEG00000023296)	ENSOMEG00000023286	ENSOMEG00000000796	ENSOMEG00000023273	ENSOMEG00000023244	ENSOMEG00000023200	ENSOMEG00000023181	ENSOMEG00000023177	ENSOMEG00000023164	ENSOMEG00000023132	ENSOMEG00000023123	ENSOMEG00000023117
Javanese ricefish	MODERN SPECIES	9	ednrab (ENSOJAG00000012604)	ENSOJAG00000012615	slc10a7 (ENSOJAG00000012639)	REELD1 (ENSOJAG00000012721)	ENSOJAG00000012764	ENSOJAG00000012772	abce1 (ENSOJAG00000012837)	anapc10 (ENSOJAG00000012864)	ENSOJAG00000012875	ENSOJAG00000012910	ENSOJAG00000013169	ENSOJAG00000013174	ENSOJAG00000013177	ENSOJAG00000013182	ENSOJAG00000013190	ENSOJAG00000013220 ##22	ENSOJAG00000013432	abcg2a (ENSOJAG00000013455)	PPM1K (ENSOJAG00000013619)	ENSOJAG00000013640	rnf150b (ENSOJAG00000013651)	ENSOJAG00000013664	ENSOJAG00000013847	ENSOJAG00000013887	ENSOJAG00000013920	ENSOJAG00000013939	ENSOJAG00000013949	ENSOJAG00000013971	ENSOJAG00000002003	ENSOJAG00000002024	ENSOJAG00000002045
Cyprinodontiformes	ANCESTRAL SPECIES	22	ENSGT00940000155694.h	ENSGT00940000154895.a.a	ENSGT01100000263529.a.a.a.a.b.c.a	ENSGT00940000155201.d	ENSGT01100000263512.a.a.b.a	ENSGT00390000008611	ENSGT00390000011932	ENSGT00940000163277	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT00940000154986.a	ENSGT01090000260059.a.b.b.b.b.f.a.a.c.a	ENSGT00940000177950	ENSGT00940000155951.b.bb #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000156171.h	ENSGT01090000260059.a.b.b.b.b.f.a.b.a	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT01050000244866.D.a.d	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000169316	ENSGT00940000160928.n.b.c.a.b	ENSGT00940000160928.n.b.c.a.a
Aplocheiloidei	ANCESTRAL SPECIES	71	ENSGT00940000155694.h	ENSGT00940000154895.a.a	ENSGT01100000263529.a.a.a.a.b.c.a	ENSGT00940000155201.d	ENSGT01100000263512.a.a.b.a	ENSGT00390000011932	ENSGT00940000163277	ENSGT00940000156063.l	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT00940000154986.a	ENSGT01090000260059.a.b.b.b.b.f.a.a.c.a	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b.bb #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT01030000234528.A.a.a	ENSGT00570000079168.b.b.b	ENSGT00940000156171.h	ENSGT01090000260059.a.b.b.b.b.f.a.b.a	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT01050000244866.D.a.d	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000169316
Mangrove rivulus	MODERN SPECIES	409	ENSKMAG00000004412	TMEM184C (ENSKMAG00000004438)	ednrab (ENSKMAG00000004482)	slc10a7 (ENSKMAG00000004501)	ENSKMAG00000004564	ENSKMAG00000004587	ENSKMAG00000004604	abce1 (ENSKMAG00000004632)	anapc10 (ENSKMAG00000004668)	ENSKMAG00000004716	ENSKMAG00000004740	ENSKMAG00000004755	ENSKMAG00000004778	si:ch211-133n4.4 (ENSKMAG00000004790)	tec (ENSKMAG00000004815) #22	ENSKMAG00000004930 ##22	ENSKMAG00000004990
Turquoise killifish	MODERN SPECIES	1613	ENSNFUG00015001500	ENSNFUG00015001494	ENSNFUG00015001489	ENSNFUG00015001482	ABCE1 (ENSNFUG00015001464)	ANAPC10 (ENSNFUG00015001454)	FBXW7 (ENSNFUG00015001423)	ENSNFUG00015001406	CDK9 (ENSNFUG00015001400)	ENSNFUG00015001399	ENSNFUG00015001394	ENSNFUG00015001392	ENSNFUG00015001387	ENSNFUG00015001380	TEC (ENSNFUG00015001333) #22	ENSNFUG00015001289 ##22	ENSNFUG00015001253	ABCG2A (ENSNFUG00015000793)	PPM1K (ENSNFUG00015000591)	ENSNFUG00015000583	RNF150A (ENSNFUG00015000570)	ENSNFUG00015000565	ENSNFUG00015000561	ENSNFUG00015000553	ENSNFUG00015000545	ENSNFUG00015000534	ENSNFUG00015000525	ENSNFUG00015000498	ENSNFUG00015000458	ENSNFUG00015000442	ENSNFUG00015000417
Cyprinodontoidei	ANCESTRAL SPECIES	21	ENSGT00940000155694.h	ENSGT00940000154895.a.a	ENSGT01100000263529.a.a.a.a.b.c.a.x.a	ENSGT01100000263529.a.a.a.a.b.c.a.x.b	ENSGT00940000155201.d	ENSGT01100000263512.a.a.b.a	ENSGT00390000008611	ENSGT00390000011932	ENSGT00940000163277	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT00940000154986.a	ENSGT00940000177950	ENSGT00940000155951.b.bb #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT01050000244866.D.a.d	ENSGT00940000177988	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000169316.a
NAME_4	ANCESTRAL SPECIES	365													ENSGT01090000260059.a.b.b.b.b.f.a.a.c.a	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b.bb #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000156171.h
Sheepshead minnow	MODERN SPECIES	1045												ENSCVAG00000009859	si:ch211-133n4.4 (ENSCVAG00000009853)	ENSCVAG00000009845	ENSCVAG00000009835 #22	ENSCVAG00000009824 ##22	ENSCVAG00000009813	abcg2a (ENSCVAG00000009740)	PPM1K (ENSCVAG00000009715)	rnf150b (ENSCVAG00000009696)	ENSCVAG00000009673	ENSCVAG00000009625	ENSCVAG00000009620
Mummichog	MODERN SPECIES	689						ENSFHEG00000023031	ENSFHEG00000000570	ENSFHEG00000023066	ENSFHEG00000023097	ENSFHEG00000023146	ENSFHEG00000023173	ENSFHEG00000023193	ENSFHEG00000023199	ENSFHEG00000023208	tec (ENSFHEG00000001851) #22	ENSFHEG00000000863 ##22	ENSFHEG00000001860 #22
Poeciliinae	ANCESTRAL SPECIES	32	ENSGT01100000263529.a.a.a.a.b.c.a.x.a	ENSGT01100000263529.a.a.a.a.b.c.a.x.b	ENSGT00940000155201.d	ENSGT01100000263512.a.a.b.a	ENSGT00390000008611	ENSGT00390000011932	ENSGT00940000163277	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT01090000260059.a.b.b.b.a.c.b.b.a.a.a.b.a.a	ENSGT00940000154986.a	ENSGT01090000260059.a.b.b.b.a.c.b.b.b.a.a.b.b	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b.bb.a #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT01050000244866.D.a.d	ENSGT00940000177988	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000169316.a	ENSGT00990000204085.e.a	ENSGT01050000244843.c.a.a.b.b.m
Platyfish	MODERN SPECIES	5	REELD1 (ENSXMAG00000024845)	ENSXMAG00000026468	ENSXMAG00000021150	abce1 (ENSXMAG00000001778)	anapc10 (ENSXMAG00000001772)	ENSXMAG00000027020	ENSXMAG00000001769	ENSXMAG00000024742	ENSXMAG00000027354	ENSXMAG00000022262	ENSXMAG00000026423	ENSXMAG00000029215	ENSXMAG00000021648	ENSXMAG00000028382	tec (ENSXMAG00000009665) #22	ENSXMAG00000009726 ##22	ENSXMAG00000009765	abcg2a (ENSXMAG00000009769)	PPM1K (ENSXMAG00000009792)	rnf150b (ENSXMAG00000026837)	ENSXMAG00000026712	ENSXMAG00000027235	ENSXMAG00000027845	ENSXMAG00000023288	ENSXMAG00000009808	ENSXMAG00000009838	ENSXMAG00000029034	ENSXMAG00000024148	ENSXMAG00000009849	CORO2A (ENSXMAG00000009901)	ENSXMAG00000026518
Poecilia	ANCESTRAL SPECIES	63	ENSGT01100000263529.a.a.a.a.b.c.a.x.a	ENSGT01100000263529.a.a.a.a.b.c.a.x.b	ENSGT00940000155201.d	ENSGT01100000263512.a.a.b.a	ENSGT00390000008611	ENSGT00390000011932	ENSGT00940000163277	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT01090000260059.a.b.b.b.a.c.b.b.a.a.a.b.a.a	ENSGT00940000154986.a	ENSGT01090000260059.a.b.b.b.a.c.b.b.b.a.a.b.b	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b.bb.a #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.a.a.a.c.b	ENSGT01050000244866.D.a.d	ENSGT00940000177988	ENSGT00940000155598.b	ENSGT00950000182907.a.b.a	ENSGT00940000154737.d	ENSGT00940000169316.a.a	ENSGT00990000204085.e.a.b
Guppy	MODERN SPECIES	448	slc10a7 (ENSPREG00000002861)	ENSPREG00000002839	ENSPREG00000002832	ENSPREG00000002816	abce1 (ENSPREG00000002793)	anapc10 (ENSPREG00000002780)	ENSPREG00000002772	ENSPREG00000002762	ENSPREG00000002746	ENSPREG00000002739	ENSPREG00000002722	ENSPREG00000002658	ENSPREG00000002542 #22	ENSPREG00000002521	ENSPREG00000002506 #22	ENSPREG00000002475 ##22	ENSPREG00000002464 #22	ENSPREG00000002434	abcg2a (ENSPREG00000002279)	PPM1K (ENSPREG00000002243)	rnf150b (ENSPREG00000002234)	ENSPREG00000002224	ENSPREG00000002215	ENSPREG00000002195	ENSPREG00000002153	ENSPREG00000002137	ENSPREG00000002023	ENSPREG00000001979	ENSPREG00000001948	ENSPREG00000001942	ENSPREG00000001934
NAME_6	ANCESTRAL SPECIES	213	ENSGT00940000154895.a.a	ENSGT01100000263529.a.a.a.a.b.c.a.x.a	ENSGT01100000263529.a.a.a.a.b.c.a.x.b	ENSGT00940000155201.d	ENSGT01100000263512.a.a.b.a	ENSGT00390000008611	ENSGT00390000011932	ENSGT00940000163277	ENSGT00940000159922.a.b	ENSGT00390000015089	ENSGT00390000013722	ENSGT01090000260059.a.b.b.b.a.c.b.b.a.a.a.b.a.a	ENSGT00940000154986.a	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b.bb.a #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000156171.h	ENSGT01090000260059.a.b.b.b.a.c.b.b.a.a.a.a.a.a.b.a.b
Sailfin molly	MODERN SPECIES	1441														ENSPLAG00000009113	tec (ENSPLAG00000009168) #22	ENSPLAG00000009292 ##22	ENSPLAG00000009776	abcg2a (ENSPLAG00000009807)	PPM1K (ENSPLAG00000009844)	rnf150b (ENSPLAG00000009908)	ENSPLAG00000009952
Amazon molly	MODERN SPECIES	538	ENSPFOG00000018052	DCLK2 (ENSPFOG00000018202)	ENSPFOG00000022359	ENSPFOG00000018197	TMEM184C (ENSPFOG00000018179)	ednrab (ENSPFOG00000018152)	TTC29 (ENSPFOG00000018125)	slc10a7 (ENSPFOG00000018121)	ENSPFOG00000018117	ENSPFOG00000018105	abce1 (ENSPFOG00000018078)	anapc10 (ENSPFOG00000018074)	ENSPFOG00000018056	ENSPFOG00000018048	tec (ENSPFOG00000017971) #22	ENSPFOG00000017871 ##22	ENSPFOG00000017860	abcg2a (ENSPFOG00000017801)	PPM1K (ENSPFOG00000017785)	rnf150b (ENSPFOG00000017758)	ENSPFOG00000020809	ENSPFOG00000018204	ENSPFOG00000023201	ENSPFOG00000017753
Percomorphaceae_C	ANCESTRAL SPECIES	20	ENSGT00390000005182.j	ENSGT00390000013075.b	ENSGT00940000155905.b	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000160928.n.b.c.b	ENSGT00940000163711.b.e.a.a.b.b	ENSGT00940000169316	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j	ENSGT01000000221658	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT01010000228954	ENSGT00390000013722	ENSGT00390000015089
Eupercaria	ANCESTRAL SPECIES	19						ENSGT00940000163711.b.e.a.a.a	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT01050000244843.c.a.b.b	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT01010000228954	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b
Eupecaria_A	ANCESTRAL SPECIES	20						ENSGT00940000163711.b.e.a.a.a	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT01050000244843.c.a.b.b	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT01010000228954	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b
Ballan wrasse	MODERN SPECIES	998											ENSLBEG00000025638	ENSLBEG00000025599	CORO2A (ENSLBEG00000025514)	ENSLBEG00000025436	tec (ENSLBEG00000025343) #22	ENSLBEG00000025244 ##22	ENSLBEG00000025154	ENSLBEG00000025109	abcg2a (ENSLBEG00000025075)
Eupecaria_B	ANCESTRAL SPECIES	20							ENSGT00940000163711.b.e.a.a.a	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT01010000228954	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b
Eupecaria_C	ANCESTRAL SPECIES	47	ENSGT00390000003680.a.a.b	ENSGT00940000164842	ENSGT00940000157904.b	ENSGT00940000158972	ENSGT00390000001134.b.`b.b	ENSGT00390000014072.A	ENSGT01060000248594.e.a.n	ENSGT00940000156801.g	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000177759	ENSGT00940000154986.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	69							ENSGT00940000163711.b.e.a.a.a	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j	ENSGT01050000244866.D.a.d	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00990000213964	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000177759	ENSGT00940000154986.a
European seabass	MODERN SPECIES	32	ENSDLAG00005030135	ENSDLAG00005033142	ENSDLAG00005030427	ENSDLAG00005034467	ENSDLAG00005006544	ENSDLAG00005006965	ENSDLAG00005006943	ENSDLAG00005028503	ENSDLAG00005012838	ENSDLAG00005032116	ENSDLAG00005015543	ENSDLAG00005015622	ENSDLAG00005031066	ENSDLAG00005006933	ENSDLAG00005006749 #22	ENSDLAG00005006614 ##22	ENSDLAG00005006572	ENSDLAG00005003602	ENSDLAG00005003445	ENSDLAG00005030098	ENSDLAG00005003318	ENSDLAG00005003302	ENSDLAG00005002580	ENSDLAG00005030780	ENSDLAG00005031958
Large yellow croaker	MODERN SPECIES	485	ENSLCRG00005014211	ENSLCRG00005014156	ift46 (ENSLCRG00005014130)	ENSLCRG00005014124	ENSLCRG00005014098	ENSLCRG00005014069	ENSLCRG00005014045	ENSLCRG00005013989	ENSLCRG00005013961	CORO2A (ENSLCRG00005013938)	ENSLCRG00005013934	ENSLCRG00005013933	ENSLCRG00005013932	ENSLCRG00005013920	tec (ENSLCRG00005013538) #22	ENSLCRG00005013323 ##22	ENSLCRG00005013264	abcg2a (ENSLCRG00005012279)	PPM1K (ENSLCRG00005012128)	ENSLCRG00005012109	ENSLCRG00005012106	ENSLCRG00005012092	rnf150b (ENSLCRG00005012080)	ENSLCRG00005012070	ENSLCRG00005012067	ENSLCRG00005012040	ENSLCRG00005012021	ENSLCRG00005011785	ENSLCRG00005011604	DCLK2 (ENSLCRG00005011485)	ENSLCRG00005011441
Gilthead seabream	MODERN SPECIES	1	ENSSAUG00010007534	ENSSAUG00010007533	ENSSAUG00010007531	ENSSAUG00010007528	ENSSAUG00010007526	ENSSAUG00010007520	ENSSAUG00010007519	ENSSAUG00010007518	ENSSAUG00010007516	ENSSAUG00010007506	ENSSAUG00010007504	CORO2A (ENSSAUG00010007500)	ENSSAUG00010007496	ENSSAUG00010007494	tec (ENSSAUG00010007469) #22	ENSSAUG00010007445 ##22	ENSSAUG00010007438	abcg2a (ENSSAUG00010002425)	PPM1K (ENSSAUG00010002353)	ENSSAUG00010002348	ENSSAUG00010002345	ENSSAUG00010002340	ENSSAUG00010002338	ENSSAUG00010002334	ENSSAUG00010002131	ENSSAUG00010002103	ENSSAUG00010002096	ENSSAUG00010002093	ENSSAUG00010002086	rnf150b (ENSSAUG00010002077)	ENSSAUG00010002063
Perciformes	ANCESTRAL SPECIES	19											ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000156633.d.b	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000154986.a	ENSGT01010000228954	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000178504	ENSGT00940000163277
Perciformes_a	ANCESTRAL SPECIES	18											ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000163999.b.a.b	ENSGT00940000156633.d.b	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000154986.a	ENSGT01010000228954	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000178504
Channel bull blenny	MODERN SPECIES	9	ENSCGOG00000011939	ENSCGOG00000011942	ENSCGOG00000011943	ENSCGOG00000011963	ENSCGOG00000011967	ENSCGOG00000011969	ENSCGOG00000011978	ENSCGOG00000011983	ENSCGOG00000011986	ENSCGOG00000011989	ENSCGOG00000011992	ENSCGOG00000011995	ENSCGOG00000012060	CORO2A (ENSCGOG00000012069)	tec (ENSCGOG00000012229) #22	ENSCGOG00000012528 ##22	ENSCGOG00000012701	abcg2a (ENSCGOG00000012752)	ENSCGOG00000014143	rnf150b (ENSCGOG00000014159)	ENSCGOG00000014165	PPM1K (ENSCGOG00000014186)	ENSCGOG00000014189	ENSCGOG00000014193	ENSCGOG00000014197	ENSCGOG00000014199	slc10a7 (ENSCGOG00000014203)	TTC29 (ENSCGOG00000014266)	ednrab (ENSCGOG00000014273)	TMEM184C (ENSCGOG00000014441)	ENSCGOG00000014445
Pike perch	MODERN SPECIES	291											ENSSLUG00000020455	ENSSLUG00000020422	CORO2A (ENSSLUG00000020404)	ENSSLUG00000020399	tec (ENSSLUG00000020336) #22	ENSSLUG00000020309 ##22	ENSSLUG00000020293	abcg2a (ENSSLUG00000018190)	ENSSLUG00000018060	rnf150b (ENSSLUG00000018057)	RNF150 (ENSSLUG00000018054)	ENSSLUG00000018024	ENSSLUG00000017508
Cottioidei	ANCESTRAL SPECIES	42										ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000163711.b.e.a.a.a	ENSGT01050000244843.c.a.b.a.a.b.a.a	ENSGT00940000161347.a.a.c.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000157587.l	ENSGT00940000156171.h	ENSGT00390000004396.h	ENSGT00940000156633.d.b	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000154986.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000178504	ENSGT00940000163277	ENSGT00390000011932
Lumpfish	MODERN SPECIES	9	ENSCLMG00005008696	MYADM (ENSCLMG00005008695)	ENSCLMG00005008593	vangl2 (ENSCLMG00005008592)	ENSCLMG00005008591	ENSCLMG00005008590	ENSCLMG00005008589	ENSCLMG00005008587	ENSCLMG00005008586	si:ch211-133n4.4 (ENSCLMG00005008582)	ENSCLMG00005008580	ENSCLMG00005008579	ENSCLMG00005008578	ENSCLMG00005008577	tec (ENSCLMG00005008558) #22	ENSCLMG00005008547 ##22	ENSCLMG00005008510	abcg2a (ENSCLMG00005004867)	ENSCLMG00005004458	rnf150b (ENSCLMG00005016565)	ENSCLMG00005016538	PPM1K (ENSCLMG00005016535)	ENSCLMG00005016534	ENSCLMG00005016532	ENSCLMG00005016482	anapc10 (ENSCLMG00005016481)	abce1 (ENSCLMG00005016469)	ENSCLMG00005016467	ENSCLMG00005016466	ENSCLMG00005016465	slc10a7 (ENSCLMG00005016463)
Stickleback	MODERN SPECIES	7						cnpy3 (ENSGACG00000018544)	ENSGACG00000018546	ENSGACG00000018553	ENSGACG00000018554	ENSGACG00000018555	ENSGACG00000018557	ENSGACG00000018560	ENSGACG00000018565	ENSGACG00000018567	tec (ENSGACG00000018577) #22	ENSGACG00000018586 ##22	ENSGACG00000018588	abcg2a (ENSGACG00000018590)	ENSGACG00000018591	ENSGACG00000018593	rnf150b (ENSGACG00000018594)	ENSGACG00000018596	PPM1K (ENSGACG00000018600)	FBXW7 (ENSGACG00000018606)	anapc10 (ENSGACG00000018607)	abce1 (ENSGACG00000018611)	ENSGACG00000018617	slc10a7 (ENSGACG00000018618)	ENSGACG00000018625	ENSGACG00000018628	TMEM184C (ENSGACG00000018629)
Percomorphaceae_D	ANCESTRAL SPECIES	20	ENSGT00970000193619	ENSGT00940000156323.c.b	ENSGT00390000005182.j	ENSGT00390000013075.b	ENSGT00940000155905.b	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000160928.n.b.c.b	ENSGT00940000163711.b.e.a.a.b.b	ENSGT00940000169316	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT01010000228954	ENSGT00390000013722	ENSGT00390000015089
Anabantaria	ANCESTRAL SPECIES	19	ENSGT00390000013075.b	ENSGT00940000155905.b	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000160928.n.b.c.b	ENSGT01030000235021	ENSGT01050000244843.c.a.b.a.a.a.b.a.b.b.b.a.a.a	ENSGT01050000244843.c.a.b.a.b.a.a	ENSGT01080000257449	ENSGT01050000244843.c.b.a.a	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000160368	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000156063.l
Anabantoidei	ANCESTRAL SPECIES	24	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000160928.n.b.c.b	ENSGT01030000235021	ENSGT01050000244843.c.a.b.a.a.a.b.a.b.b.b.a.a.a	ENSGT01050000244843.c.a.b.a.b.a.a	ENSGT01080000257449	ENSGT01050000244843.c.b.a.a	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01030000234592.A.a.b.j.c.b.a	ENSGT01000000221658	ENSGT01030000234592.A.a.b.j.d	ENSGT01030000234592.A.a.b.i.a	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000160368	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000163999.b.a.b	ENSGT00940000156171.h	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000177759	ENSGT00940000154986.a	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b	ENSGT00940000156063.l	ENSGT00940000163277
Climbing perch	MODERN SPECIES	9	ENSATEG00000014502	ENSATEG00000014512	ENSATEG00000014520	ENSATEG00000014542	ENSATEG00000014556	ENSATEG00000014573	ENSATEG00000014579	ENSATEG00000014621	ENSATEG00000014589	ENSATEG00000025269	ENSATEG00000014672	ENSATEG00000014686	ENSATEG00000027231	ENSATEG00000014701	ENSATEG00000014707 #22	ENSATEG00000014757 ##22	ENSATEG00000014788	ENSATEG00000014828	ENSATEG00000014850	ENSATEG00000014888	rnf150b (ENSATEG00000014895)	ENSATEG00000020204	ENSATEG00000020215	ENSATEG00000020232	ENSATEG00000020253	anapc10 (ENSATEG00000020265)	abce1 (ENSATEG00000020280)	ENSATEG00000020351	ENSATEG00000020386	slc10a7 (ENSATEG00000020432)	TTC29 (ENSATEG00000020477)
Zig-zag eel	MODERN SPECIES	9	ENSMAMG00000007849	ENSMAMG00000024795	ENSMAMG00000007812	ENSMAMG00000007777	ENSMAMG00000027894	ENSMAMG00000007732	ENSMAMG00000007641	ENSMAMG00000007716	ENSMAMG00000007700	ENSMAMG00000007692	ENSMAMG00000028373	ENSMAMG00000007685	ENSMAMG00000007677	ENSMAMG00000007673	ENSMAMG00000007527 #22	ENSMAMG00000007487 ##22	ENSMAMG00000007430	ENSMAMG00000007438	ENSMAMG00000024676	ENSMAMG00000026951	ENSMAMG00000007402	ENSMAMG00000007379	ENSMAMG00000007306	ENSMAMG00000007241	ENSMAMG00000007221	ENSMAMG00000007212	ENSMAMG00000007180	ENSMAMG00000007167	ENSMAMG00000007151	ENSMAMG00000007125	ENSMAMG00000024991
Carangaria	ANCESTRAL SPECIES	20	ENSGT00940000158122	ENSGT00970000193500	ENSGT00970000193619	ENSGT00940000156323.c.b	ENSGT00390000005182.j	ENSGT00390000013075.b	ENSGT00940000155905.b	ENSGT00940000160928.n.b.c.b	ENSGT00940000163711.b.e.a.a.b.b	ENSGT00940000169316	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01050000244866.D.a.d	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT01010000228954	ENSGT00390000013722	ENSGT00390000015089
Carangaria_A	ANCESTRAL SPECIES	60											ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT01050000244866.D.a.d	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000154986.a	ENSGT01010000228954	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b
Seriola	ANCESTRAL SPECIES	24	ENSGT00390000001134.b.`b.b	ENSGT00390000014072.A	ENSGT01060000248594.e.a.n	ENSGT00940000156801.g	ENSGT00950000182936.a.a.b.b	ENSGT00940000155694.h	ENSGT01090000259997.a.d.b.b.b.b.b	ENSGT00940000154895.a.a	ENSGT01100000263529.a.a.a.a.b.c.a.g	ENSGT01100000263529.a.a.a.a.b.c.a.h	ENSGT01050000244843.c.a.b.a.a.b.a.a.s	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000154986.a	ENSGT01010000228954	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000159922.a.b
Greater amberjack	DUPLICATION
Greater amberjack	MODERN SPECIES	124	dachb (ENSSDUG00000010555)	cnpy3 (ENSSDUG00000010598)	trpc5a (ENSSDUG00000010612)	ENSSDUG00000010648	ENSSDUG00000010674	ENSSDUG00000010704	ENSSDUG00000010721	DCLK2 (ENSSDUG00000010741)	ENSSDUG00000010827	ENSSDUG00000010868	ENSSDUG00000010878	ENSSDUG00000010891	ENSSDUG00000010928	CORO2A (ENSSDUG00000010949)	tec (ENSSDUG00000010983) #22	ENSSDUG00000011050 ##22	ENSSDUG00000011061 ##22	ENSSDUG00000011081	abcg2a (ENSSDUG00000011124)	PPM1K (ENSSDUG00000011150)	ENSSDUG00000011168	ENSSDUG00000011175	ENSSDUG00000011191	rnf150b (ENSSDUG00000011273)	ENSSDUG00000011296	ENSSDUG00000011337	ENSSDUG00000011352	ENSSDUG00000011385	ENSSDUG00000011410	anapc10 (ENSSDUG00000011423)	abce1 (ENSSDUG00000011455)
Greater amberjack	MODERN SPECIES	124	cnpy3 (ENSSDUG00000010598)	trpc5a (ENSSDUG00000010612)	ENSSDUG00000010648	ENSSDUG00000010674	ENSSDUG00000010704	ENSSDUG00000010721	DCLK2 (ENSSDUG00000010741)	ENSSDUG00000010827	ENSSDUG00000010868	ENSSDUG00000010878	ENSSDUG00000010891	ENSSDUG00000010928	CORO2A (ENSSDUG00000010949)	tec (ENSSDUG00000010983) #22	ENSSDUG00000011050 ##22	ENSSDUG00000011061 ##22	ENSSDUG00000011081	abcg2a (ENSSDUG00000011124)	PPM1K (ENSSDUG00000011150)	ENSSDUG00000011168	ENSSDUG00000011175	ENSSDUG00000011191	rnf150b (ENSSDUG00000011273)	ENSSDUG00000011296	ENSSDUG00000011337	ENSSDUG00000011352	ENSSDUG00000011385	ENSSDUG00000011410	anapc10 (ENSSDUG00000011423)	abce1 (ENSSDUG00000011455)
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	MODERN SPECIES	3201										ENSSLDG00000001865	ENSSLDG00000001849	ENSSLDG00000001810	ENSSLDG00000001794	CORO2A (ENSSLDG00000001430)	tec (ENSSLDG00000001296) #22	ENSSLDG00000001276 ##22	ENSSLDG00000001257 ##22	CDKL2 (ENSSLDG00000001187)	abcg2a (ENSSLDG00000001004)	PPM1K (ENSSLDG00000000954)	ENSSLDG00000000950	ENSSLDG00000000922	ENSSLDG00000000872	rnf150b (ENSSLDG00000000849)	ENSSLDG00000000723	ENSSLDG00000000684	ENSSLDG00000000676	ENSSLDG00000000624	anapc10 (ENSSLDG00000000579)	abce1 (ENSSLDG00000000134)	ENSSLDG00000023411
Yellowtail amberjack	MODERN SPECIES	3201									ENSSLDG00000001865	ENSSLDG00000001849	ENSSLDG00000001810	ENSSLDG00000001794	CORO2A (ENSSLDG00000001430)	tec (ENSSLDG00000001296) #22	ENSSLDG00000001276 ##22	ENSSLDG00000001257 ##22	CDKL2 (ENSSLDG00000001187)	abcg2a (ENSSLDG00000001004)	PPM1K (ENSSLDG00000000954)	ENSSLDG00000000950	ENSSLDG00000000922	ENSSLDG00000000872	rnf150b (ENSSLDG00000000849)	ENSSLDG00000000723	ENSSLDG00000000684	ENSSLDG00000000676	ENSSLDG00000000624	anapc10 (ENSSLDG00000000579)	abce1 (ENSSLDG00000000134)	ENSSLDG00000023411
Barramundi perch	MODERN SPECIES	478								ENSLCAG00010027629	ENSLCAG00010000168	ENSLCAG00010000173	ENSLCAG00010000193	ENSLCAG00010000203	CORO2A (ENSLCAG00010000261)	ENSLCAG00010000525	tec (ENSLCAG00010000817) #22	ENSLCAG00010000849 ##22	ENSLCAG00010000852	abcg2a (ENSLCAG00010000903)	PPM1K (ENSLCAG00010000992)	ENSLCAG00010000996	ENSLCAG00010000998	rnf150b (ENSLCAG00010001000)	ENSLCAG00010001002	ENSLCAG00010001006	ENSLCAG00010001018	ENSLCAG00010001021	ENSLCAG00010001023	ENSLCAG00010001031
Pleuronectoidei	ANCESTRAL SPECIES	50	ENSGT00940000155927	ENSGT00940000155973.b.c	ENSGT00940000157467.u.a	ENSGT00940000158122	ENSGT00970000193500	ENSGT00970000193619	ENSGT00940000156323.c.b	ENSGT00390000013075.b	ENSGT00940000155905.b	ENSGT00940000160928.n.b.c.b	ENSGT00940000169316	ENSGT00940000154737.d	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000166707	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00940000163999.b.a.b	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l	ENSGT00950000183040.A.b.h	ENSGT00940000155128.a.b.a.a	ENSGT00940000154986.a	ENSGT00940000177759	ENSGT00390000013722	ENSGT00390000015089
Turbot	MODERN SPECIES	11	ENSSMAG00000016964	ENSSMAG00000016908	tlr2 (ENSSMAG00000016802)	ENSSMAG00000032176	ENSSMAG00000016761	ENSSMAG00000016718	ENSSMAG00000016702	ENSSMAG00000016691	ENSSMAG00000016683	ENSSMAG00000037857	ENSSMAG00000016661	ENSSMAG00000016549	ENSSMAG00000025678	ENSSMAG00000016494	ENSSMAG00000016413 #22	ENSSMAG00000016397 ##22	ENSSMAG00000016354	ENSSMAG00000016326	ENSSMAG00000016293	ENSSMAG00000027960	ENSSMAG00000016280	ENSSMAG00000016254	rnf150b (ENSSMAG00000016242)	ENSSMAG00000016167	ENSSMAG00000016132	ENSSMAG00000016099	ENSSMAG00000016063	ENSSMAG00000016090	anapc10 (ENSSMAG00000016035)	abce1 (ENSSMAG00000015973)	ENSSMAG00000015923
Tongue sole	MODERN SPECIES		LRAT (ENSCSEG00000005518)	rbm46 (ENSCSEG00000005530)	npy2rl (ENSCSEG00000005540)	fga (ENSCSEG00000005543)	fgb (ENSCSEG00000005560)	rnf175 (ENSCSEG00000005606)	ENSCSEG00000005634	ENSCSEG00000005644	ENSCSEG00000005647	ENSCSEG00000005651	ENSCSEG00000005658	ENSCSEG00000005662	ENSCSEG00000005671	CORO2A (ENSCSEG00000005679)	tec (ENSCSEG00000005689) #22	ENSCSEG00000005695 ##22	ENSCSEG00000005706	abcg2a (ENSCSEG00000005742)	PPM1K (ENSCSEG00000005745)	ENSCSEG00000005749	ENSCSEG00000005760	rnf150b (ENSCSEG00000005768)	DLG4 (ENSCSEG00000005782)	ENSCSEG00000005818	ENSCSEG00000005821	ENSCSEG00000005824	ENSCSEG00000005838	ENSCSEG00000005841	ephb4b (ENSCSEG00000005849)	psmb6 (ENSCSEG00000005875)	trappc1 (ENSCSEG00000005883)
Cod	MODERN SPECIES	8	ENSGMOG00000029512	ENSGMOG00000031926	ENSGMOG00000033373	ENSGMOG00000026061	ENSGMOG00000010298	ENSGMOG00000002977	ENSGMOG00000034220	ANAPC10 (ENSGMOG00000007142)	ABCE1 (ENSGMOG00000004035)	ENSGMOG00000029350	ENSGMOG00000026991	SMAD1 (ENSGMOG00000031497)	ENSGMOG00000035877	ENSGMOG00000005414	ENSGMOG00000005384	ENSGMOG00000029362 ##22	ENSGMOG00000003960	ENSGMOG00000009820	ENSGMOG00000005044	ENSGMOG00000022790	ENSGMOG00000009013	ENSGMOG00000005026	ENSGMOG00000028950	ENSGMOG00000030060	ENSGMOG00000028824	ENSGMOG00000017677	ENSGMOG00000016527	ENSGMOG00000026390	ENSGMOG00000017868	ENSGMOG00000030681	ENSGMOG00000002010
Protacanthopterygii	ANCESTRAL SPECIES	139												ENSGT00940000160529	ENSGT00950000182907.a.b.a	ENSGT00940000155598.b	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00940000160368	ENSGT00940000166038	ENSGT00940000156633.d.b	ENSGT00940000175002	ENSGT00390000004396.h	ENSGT00940000156171.h	ENSGT00940000157587.l.b	ENSGT00940000156801.g	ENSGT00940000162501.c.b	ENSGT00390000013722	ENSGT00940000159922.a.b	ENSGT00940000156063.l	ENSGT00390000011932	ENSGT00390000008611	ENSGT01100000263512.a.a.b.a
Salmoninae	ANCESTRAL SPECIES	1601															ENSGT00940000155951.b.`b #22	ENSGT00940000155951.a ##22
Huchen	MODERN SPECIES	9162																ENSHHUG00000006177 ##22
Salmoninae_a	ANCESTRAL SPECIES	148	ENSGT00390000005739.a.a.q	ENSGT00800000124060.A.a.f	ENSGT01060000248840.b.a.b	ENSGT00390000003680.a.a.b	ENSGT00940000164842	ENSGT00940000155973.b.c.d.a	ENSGT00510000047351.b.s	ENSGT00390000011679	ENSGT00940000157467.z	ENSGT00940000158122.j	ENSGT00390000013075.b	ENSGT00940000156323.c.b	ENSGT00940000155905.b.k	ENSGT00950000182907.a.b.a.a	ENSGT00940000155951.b.`b #22	ENSGT00940000155951.a ##22	ENSGT00940000156171.h.p.a	ENSGT00940000162501.c.b	ENSGT00940000163277	ENSGT00940000155201.d	ENSGT00930000151815
Oncorhynchus	ANCESTRAL SPECIES	9	ENSGT00940000166331.f	ENSGT00950000182985.b.b.sc.d.a.a	ENSGT00390000015415	ENSGT00390000003680.a.a.b	ENSGT00940000164842	ENSGT00940000155973.b.c.d.a	ENSGT00510000047351.b.s	ENSGT00390000011679	ENSGT00940000157467.z	ENSGT00940000158122.j	ENSGT00390000013075.b	ENSGT00940000156323.c.b	ENSGT00940000155905.b.k	ENSGT00950000182907.a.b.a.a	ENSGT00940000155951.b.`b #22	ENSGT00940000155951.a ##22	ENSGT00940000156171.h.p.a	ENSGT00940000163277	ENSGT00940000155201.d	ENSGT00930000151815
Rainbow trout	MODERN SPECIES	13	ENSOMYG00000012002	ENSOMYG00000075790	zgc:77880 (ENSOMYG00000060039)	ENSOMYG00000051393	ENSOMYG00000024056	ENSOMYG00000065635	fga (ENSOMYG00000056976)	fgb (ENSOMYG00000073865)	rnf175 (ENSOMYG00000016691)	ENSOMYG00000024133	ENSOMYG00000076514	ENSOMYG00000058414	ENSOMYG00000067550	ENSOMYG00000054671	ENSOMYG00000068538 #22	ENSOMYG00000061706 ##22	ENSOMYG00000024855	ENSOMYG00000062617	ENSOMYG00000051937	ENSOMYG00000062282	ENSOMYG00000024789	ENSOMYG00000060178	ENSOMYG00000055044	ENSOMYG00000061205	ENSOMYG00000067707	ENSOMYG00000024644	ENSOMYG00000024492	ENSOMYG00000024410	ENSOMYG00000024352	ENSOMYG00000074974	ENSOMYG00000065552
Oncorhynchus_a	ANCESTRAL SPECIES	231									ENSGT00390000011679	ENSGT00940000157467.z	ENSGT00390000013075.b	ENSGT00940000156323.c.b	ENSGT00940000155905.b.k	ENSGT00950000182907.a.b.a.a	ENSGT00940000155951.b.`b #22	ENSGT00940000155951.a ##22	ENSGT00940000163277	ENSGT00940000155201.d
Coho salmon	MODERN SPECIES	29	ENSOKIG00005034272	ENSOKIG00005034267	ENSOKIG00005034265	ENSOKIG00005034063	FHIP1A (ENSOKIG00005033720)	ENSOKIG00005033637	fga (ENSOKIG00005033627)	ENSOKIG00005033614	rnf175 (ENSOKIG00005033556)	ENSOKIG00005033444	ENSOKIG00005033393	ENSOKIG00005033376	ENSOKIG00005033369	ENSOKIG00005033352	TEC (ENSOKIG00005033007) #22	ENSOKIG00005032968 ##22	RNF150 (ENSOKIG00005032959)	ENSOKIG00005032937	ENSOKIG00005032932	ENSOKIG00005032916	TMEM184C (ENSOKIG00005032865)	ENSOKIG00005032850	PIP4P1 (ENSOKIG00005032812)	zgc:77880 (ENSOKIG00005032788)	NPY2R (ENSOKIG00005032772)	LRAT (ENSOKIG00005032762)	ENSOKIG00005032740	ENSOKIG00005032733	ENSOKIG00005032673	ENSOKIG00005032656	ENSOKIG00005032640
Salmo	ANCESTRAL SPECIES	140	ENSGT01060000248594.e.a.n.a.b	ENSGT00390000014072.A.g	ENSGT00390000001134.b.`b.b.i.b	ENSGT00390000003680.a.a.b	ENSGT00940000164842	ENSGT00940000155973.b.c.d.a	ENSGT00510000047351.b.s	ENSGT00390000011679	ENSGT00940000157467.z	ENSGT00940000158122.j	ENSGT00390000013075.b	ENSGT00940000156323.c.b	ENSGT00940000155905.b.k	ENSGT00950000182907.a.b.a.a	ENSGT00940000155951.b.`b #22	ENSGT00940000155951.a ##22	ENSGT00940000156171.h.p.a	ENSGT00940000162501.c.b	ENSGT00940000163277	ENSGT00940000155201.d	ENSGT00930000151815
River trout	MODERN SPECIES	38	ENSSTUG00000005166	ENSSTUG00000005162	ENSSTUG00000005107	cnpy3 (ENSSTUG00000005090)	ENSSTUG00000005071	ENSSTUG00000005067	LRAT (ENSSTUG00000005064)	ENSSTUG00000005055	ENSSTUG00000005052	ENSSTUG00000005001	rnf175 (ENSSTUG00000004967)	ENSSTUG00000004703	ENSSTUG00000004686	ENSSTUG00000004678	tec (ENSSTUG00000004463) #22	ENSSTUG00000004004 ##22	rnf150b (ENSSTUG00000003956)	TMEM184C (ENSSTUG00000003809)	ENSSTUG00000003771	ENSSTUG00000003745	ENSSTUG00000003735	ENSSTUG00000003727	ENSSTUG00000003716	ENSSTUG00000003708	ENSSTUG00000003690	ENSSTUG00000003678	cyp17a2 (ENSSTUG00000003666)	ENSSTUG00000003596	ENSSTUG00000003560	ENSSTUG00000003534	ENSSTUG00000003524
Northern pike	MODERN SPECIES	23	cnpy3 (ENSELUG00000000311)	trpc5a (ENSELUG00000008476)	ENSELUG00000005730	ENSELUG00000005762	dysf (ENSELUG00000006056)	exoc6b (ENSELUG00000007793)	tkfc (ENSELUG00000007754)	ENSELUG00000034018	ENSELUG00000007694	ENSELUG00000007702	ENSELUG00000027619	ENSELUG00000007677	ENSELUG00000007665	CORO2A (ENSELUG00000029366)	tec (ENSELUG00000007644) #22	ENSELUG00000007553 ##22	ENSELUG00000007538	abcg2a (ENSELUG00000007520)	PPM1K (ENSELUG00000007501)	ENSELUG00000007484	rnf150b (ENSELUG00000007475)	ENSELUG00000007423	ENSELUG00000007363	ENSELUG00000007276	anapc10 (ENSELUG00000007131)	ENSELUG00000007102	smad1 (ENSELUG00000007066)	ENSELUG00000007025	ENSELUG00000006985	ENSELUG00000032960	ENSELUG00000026641
Osteoglossiformes	ANCESTRAL SPECIES	148	ENSGT00530000069080	ENSGT00940000164073.b.a	ENSGT00940000157370.a	ENSGT00940000157714	ENSGT00940000159660.g	ENSGT00940000155140	ENSGT00930000151042	ENSGT00940000157887.p	ENSGT00950000182917.a.a.a.a	ENSGT01030000235336	ENSGT01060000248998	ENSGT00940000154737.d.e	ENSGT00950000182907.a.b.b.a.b	ENSGT00940000155598.d	ENSGT00940000155951.b #22	ENSGT00940000155951.a ##22	ENSGT00390000011365.b.l	ENSGT00940000160368	ENSGT00940000166038	ENSGT00940000156633.d.b
P. kingsleyae	MODERN SPECIES	234	FHDC1 (ENSPKIG00000013771)	ENSPKIG00000013733	casp6a (ENSPKIG00000013707)	ENSPKIG00000013679	dnajb14 (ENSPKIG00000013657)	TTC39B (ENSPKIG00000013623)	ENSPKIG00000013598	ENSPKIG00000013576	ENSPKIG00000013567	ENSPKIG00000013551	ENSPKIG00000013513	CORO2A (ENSPKIG00000013483)	ENSPKIG00000013456 #22	ENSPKIG00000013442	ENSPKIG00000013423 #22	ENSPKIG00000013396 ##22	G3BP2 (ENSPKIG00000013310)	abcg2a (ENSPKIG00000013249)	PPM1K (ENSPKIG00000013197)	ENSPKIG00000013165	ENSPKIG00000013148	ENSPKIG00000013137	TBC1D9 (ENSPKIG00000012912)	RNF150 (ENSPKIG00000012850)	znf330 (ENSPKIG00000012819)	LEF1 (ENSPKIG00000012779)	cyp2u1 (ENSPKIG00000012757)	sgms2b (ENSPKIG00000012734)	ENSPKIG00000012720	GIMD1 (ENSPKIG00000012707)	aimp1b (ENSPKIG00000012696)
Asian bonytongue	MODERN SPECIES	18	sgms2b (ENSSFOG00015031933)	cyp2u1 (ENSSFOG00015014549)	LEF1 (ENSSFOG00015014526)	ENSSFOG00015014418	CASP6 (ENSSFOG00015029815)	ENSSFOG00015014238	dnajb14 (ENSSFOG00015014183)	TTC39B (ENSSFOG00015014125)	PSIP1 (ENSSFOG00015014102)	ENSSFOG00015014057	bnc2 (ENSSFOG00015014026)	ENSSFOG00015013986	anp32b (ENSSFOG00015032852)	CORO2A (ENSSFOG00015013929)	tec (ENSSFOG00015013833) #22	ENSSFOG00015013782 ##22	G3BP2 (ENSSFOG00015013690)	CDKL2 (ENSSFOG00015013655)	abcg2a (ENSSFOG00015013635)	PPM1K (ENSSFOG00015027104)	ENSSFOG00015013565	ENSSFOG00015013544	ENSSFOG00015025504	ucp1 (ENSSFOG00015013477)	ENSSFOG00015026393	TBC1D9 (ENSSFOG00015013420)	RNF150 (ENSSFOG00015013385)	INPP4B (ENSSFOG00015013349)	GAB1 (ENSSFOG00015013326)	SMARCA5 (ENSSFOG00015013252)	hhip (ENSSFOG00015013203)
Elephant shark	MODERN SPECIES	1510	rasl11b (ENSCMIG00000012475)	USP46 (ENSCMIG00000012383)	spata18 (ENSCMIG00000012353) #7	sgcb (ENSCMIG00000012345) #8	dcun1d4 (ENSCMIG00000012304) #11	CWH43 (ENSCMIG00000012282) #13	ENSCMIG00000012278 #14	OCIAD1 (ENSCMIG00000012271) #15	fryl (ENSCMIG00000011534) #17	ZAR1 (ENSCMIG00000011272) #18	SLC10A4 (ENSCMIG00000011270) #19	ENSCMIG00000011267 #19	ENSCMIG00000011245	slain2 (ENSCMIG00000011224) #21	tec (ENSCMIG00000011174) #22	ENSCMIG00000011110 ##22	ENSCMIG00000011095	NIPAL1 (ENSCMIG00000011093) #25	ENSCMIG00000011090	cnga1a (ENSCMIG00000011087) #26	ENSCMIG00000011061	NFXL1 (ENSCMIG00000010935) #27	CORIN (ENSCMIG00000010880) #29	ENSCMIG00000010806 #30	commd8 (ENSCMIG00000010776) #31	GABRB1 (ENSCMIG00000010773) #32	gabra4 (ENSCMIG00000010750) #33	ENSCMIG00000010562 #35	ENSCMIG00000010469 #37	GUF1 (ENSCMIG00000010448)	ENSCMIG00000010440
Cyclostomata	DUPLICATION
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000155951.c #22
Lamprey	MODERN SPECIES	5217																ENSPMAG00000009030 #22
Hagfish	MODERN SPECIES	1068					ENSEBUG00000007994	ENSEBUG00000001241	ENSEBUG00000001095	ENSEBUG00000003892	KCNIP3 (ENSEBUG00000004789)	armh3 (ENSEBUG00000005669)	ENSEBUG00000016203	glrx3 (ENSEBUG00000007312)	rnf145b (ENSEBUG00000013018)	ENSEBUG00000011610	ENSEBUG00000007137	Ptk (ENSEBUG00000011015) #22	cyfip2 (ENSEBUG00000014461)	cyfip2 (ENSEBUG00000006715)	ENSEBUG00000000621	ENSEBUG00000014148	ENSEBUG00000014876 #35	ENSEBUG00000010142	ENSEBUG00000017023 #31	ENSEBUG00000009890 #27	ralbp1 (ENSEBUG00000002302)	ENSEBUG00000015678	ENSEBUG00000008775	ENSEBUG00000015821	ENSEBUG00000002751
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000155951.d #22
Hagfish	MODERN SPECIES	227							ENSEBUG00000009643	ENSEBUG00000015605	alg12 (ENSEBUG00000003648)	pdhb (ENSEBUG00000008001)	ube2h (ENSEBUG00000001102)	ENSEBUG00000005005	uba3 (ENSEBUG00000004905)	ENSEBUG00000010652	ENSEBUG00000015485	ENSEBUG00000015768 #22	ENSEBUG00000006625	ENSEBUG00000013938	aimp1a (ENSEBUG00000004401)	ENSEBUG00000013278	FAT1 (ENSEBUG00000001668)	ENSEBUG00000003376	slc10a7 (ENSEBUG00000008751)	pou4f1 (ENSEBUG00000013310)