Mammalia	ANCESTRAL SPECIES	2	ENSGT00940000154922.b	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000164045	ENSGT00390000003256 #13	ENSGT00940000153766.A #14	ENSGT00950000183100.B #15	ENSGT00940000153408.A #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #23	ENSGT00940000157084 #24	ENSGT00940000158672 #25	ENSGT00950000182898.a.a.a.a.b #27	ENSGT01020000230401.a.a.a.i.b ##28	ENSGT01020000230401.a.a.a.i.a #28	ENSGT00940000157927 #29	ENSGT00940000159120 #30	ENSGT00390000013762.b.a #31	ENSGT00940000159341 #32	ENSGT00940000158246 #33	ENSGT00400000022349	ENSGT00940000157172	ENSGT00390000010210	ENSGT00940000159201
Theria	ANCESTRAL SPECIES	4	ENSGT00940000154922.b	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000164045	ENSGT00390000003256 #13	ENSGT00940000153766.A #14	ENSGT00950000183100.B #15	ENSGT00940000153408.A #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #23	ENSGT00940000157084 #24	ENSGT00940000158672 #25	ENSGT00950000182898.a.a.a.a.b #27	ENSGT01020000230401.a.a.a.i.b ##28	ENSGT01020000230401.a.a.a.i.a #28	ENSGT00940000157927 #29	ENSGT00940000159120 #30	ENSGT00390000013762.b.a #31	ENSGT00940000159341 #32	ENSGT00940000158246 #33	ENSGT00390000006786 #34	ENSGT00550000074922 #36	ENSGT00600000085213	ENSGT00390000010738 #37
Eutheria	ANCESTRAL SPECIES	9	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000164045	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #14	ENSGT00950000183100.B #15	ENSGT00940000153408.A #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #23	ENSGT00940000157084 #24	ENSGT00940000158672 #25	ENSGT00490000044373 #26	ENSGT00950000182898.a.a.a.a.b #27	ENSGT01020000230401.a.a.a.i.b ##28	ENSGT01020000230401.a.a.a.i.a.a #28	ENSGT00940000157927 #29	ENSGT00940000159120 #30	ENSGT00390000013762.b.a #31	ENSGT00500000045766	ENSGT00940000159341 #32	ENSGT00940000158246 #33	ENSGT00390000006786 #34	ENSGT00550000074922 #36
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000154922.b	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #14	ENSGT00950000183100.B #15	ENSGT00940000153408.A #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #23	ENSGT00940000157084 #24	ENSGT00940000158672 #25	ENSGT00490000044373 #26	ENSGT00950000182898.a.a.a.a.b #27	ENSGT01020000230401.a.a.a.i.a.a #28	ENSGT00940000157927 #29	ENSGT00940000159120 #30	ENSGT00390000013762.b.a #31	ENSGT00500000045766	ENSGT00940000159341 #32	ENSGT00940000158246 #33	ENSGT00390000006786 #34	ENSGT00550000074922 #36	ENSGT00390000010738 #37
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000154922.b	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #14	ENSGT00950000183100.B #15	ENSGT00940000153408.A #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #23	ENSGT00940000157084 #24	ENSGT00940000158672 #25	ENSGT00490000044373 #26	ENSGT00950000182898.a.a.a.a.b #27	ENSGT01020000230401.a.a.a.i.a.a #28	ENSGT01020000230401.a.a.a.i.b ##28	ENSGT00940000157927 #29	ENSGT00940000159120 #30	ENSGT00390000013762.b.a #31	ENSGT00500000045766	ENSGT00940000159341 #32	ENSGT00940000158246 #33	ENSGT00390000006786 #34	ENSGT00550000074922 #36
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000154922.b	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #14	ENSGT00950000183100.B #15	ENSGT00940000153408.A.d #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #23	ENSGT00940000157084 #24	ENSGT00940000158672 #25	ENSGT00490000044373 #26	ENSGT00950000182898.a.a.a.a.b #27	ENSGT01020000230401.a.a.a.i.b ##28	ENSGT00940000157927 #29	ENSGT01020000230401.a.a.a.i.a.a #28	ENSGT00940000159120 #30	ENSGT00390000013762.b.a #31	ENSGT00500000045766	ENSGT00940000159341 #32	ENSGT00940000158246 #33	ENSGT00390000006786 #34	ENSGT00550000074922 #36
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000154922.b	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #14	ENSGT00950000183100.B #15	ENSGT00940000153408.A.d #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #23	ENSGT00940000157084 #24	ENSGT00940000158672 #25	ENSGT00490000044373 #26	ENSGT00950000182898.a.a.a.a.b #27	ENSGT01020000230401.a.a.a.i.a.a #28	ENSGT00940000157927 #29	ENSGT00940000159120 #30	ENSGT00390000013762.b.a #31	ENSGT00500000045766	ENSGT00940000159341 #32	ENSGT00940000158246 #33	ENSGT00390000006786 #34	ENSGT00550000074922 #36	ENSGT00390000010738 #37
Carnivora	ANCESTRAL SPECIES	4	ENSGT00940000154922.b	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #14	ENSGT00950000183100.B #15	ENSGT00940000153408.A.d #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #23	ENSGT00940000157084 #24	ENSGT00940000158672 #25	ENSGT00490000044373 #26	ENSGT00950000182898.a.a.a.a.b #27	ENSGT01020000230401.a.a.a.i.a.a #28	ENSGT00940000157927 #29	ENSGT00940000159120 #30	ENSGT00390000013762.b.a #31	ENSGT00940000159341 #32	ENSGT00940000158246 #33	ENSGT00390000006786 #34	ENSGT00550000074922 #36	ENSGT00390000010738 #37	ENSGT00600000085213.a
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000154922.b	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #14	ENSGT00950000183100.B #15	ENSGT00940000153408.A.d #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #23	ENSGT00940000157084 #24	ENSGT00940000158672 #25	ENSGT00490000044373 #26	ENSGT00950000182898.a.a.a.a.b #27	ENSGT01020000230401.a.a.a.i.a.a #28	ENSGT00940000157927 #29	ENSGT00940000159120 #30	ENSGT00390000013762.b.a #31	ENSGT00940000159341 #32	ENSGT00940000158246 #33	ENSGT00390000006786 #34	ENSGT00550000074922 #36	ENSGT00390000010738 #37	ENSGT00600000085213.a
Canidae	ANCESTRAL SPECIES	6	ENSGT00940000160981 #7	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #14	ENSGT00950000183100.B #15	ENSGT00940000153408.A.d #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493.i #21	ENSGT00940000157284 #22	ENSGT00390000001121 #23	ENSGT00940000157084 #24	ENSGT00940000158672 #25	ENSGT00490000044373 #26	ENSGT00950000182898.a.a.a.a.b #27	ENSGT01020000230401.a.a.a.i.a.a #28	ENSGT00940000157927 #29	ENSGT00940000159120 #30	ENSGT00390000013762.b.a #31	ENSGT00940000159341 #32	ENSGT00940000158246 #33	ENSGT00390000006786 #34	ENSGT00950000183178.a.q.b.b #35	ENSGT00550000074922 #36	ENSGT00390000010738 #37
Canis_lupus	ANCESTRAL SPECIES	11	ENSGT00940000160981 #7	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #14	ENSGT00950000183100.B #15	ENSGT00940000153408.A.d #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493.i #21	ENSGT00940000157284 #22	ENSGT00390000001121 #23	ENSGT00940000157084 #24	ENSGT00940000158672 #25	ENSGT00490000044373 #26	ENSGT00950000182898.a.a.a.a.b #27	ENSGT01020000230401.a.a.a.i.a.a #28	ENSGT00940000157927 #29	ENSGT00940000159120 #30	ENSGT00390000013762.b.a #31	ENSGT00940000159341 #32	ENSGT00940000158246 #33	ENSGT00390000006786 #34	ENSGT00950000183178.a.q.b.b #35	ENSGT00550000074922 #36	ENSGT00390000010738 #37
Dog	MODERN SPECIES	3	TTBK1 (ENSCAFG00845008729) #7	CRIP3 (ENSCAFG00845008907) #8	ZNF318 (ENSCAFG00845009007) #9	ABCC10 (ENSCAFG00845009128) #10	DLK2 (ENSCAFG00845009184) #11	TJAP1 (ENSCAFG00845009226) #12	LRRC73 (ENSCAFG00845009293) #13	YIPF3 (ENSCAFG00845009430) #14	POLR1C (ENSCAFG00845009541) #15	XPO5 (ENSCAFG00845009741) #16	POLH (ENSCAFG00845010148) #17	GTPBP2 (ENSCAFG00845010282) #18	MAD2L1BP (ENSCAFG00845010340) #19	RSPH9 (ENSCAFG00845010362) #20	MRPS18A (ENSCAFG00845010419) #21	VEGFA (ENSCAFG00845010533) #22	MRPL14 (ENSCAFG00845010714) #23	TMEM63B (ENSCAFG00845010814) #24	CAPN11 (ENSCAFG00845011002) #25	MYMX (ENSCAFG00845011194) #26	SLC29A1 (ENSCAFG00845011282) #27	ENSCAFG00845011600 #28	SLC35B2 (ENSCAFG00845011652) #29	NFKBIE (ENSCAFG00845011706) #30	TMEM151B (ENSCAFG00845011741) #31	TCTE1 (ENSCAFG00845011779) #32	AARS2 (ENSCAFG00845011820) #33	SPATS1 (ENSCAFG00845011940) #34	ENSCAFG00845011963 #35	CDC5L (ENSCAFG00845011982) #36	SUPT3H (ENSCAFG00845012174) #37