Theria	ANCESTRAL SPECIES	4	ENSGT00940000154922.b #7	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000164045	ENSGT00390000003256 #13	ENSGT00940000153766.A #15	ENSGT00950000183100.B #14	ENSGT00940000153408.A #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #24	ENSGT00940000157084 #25	ENSGT00940000158672 #26	ENSGT00950000182898.a.a.a.a.b #28	ENSGT01020000230401.a.a.a.i.b ##29	ENSGT01020000230401.a.a.a.i.a #29	ENSGT00940000157927 #30	ENSGT00940000159120 #31	ENSGT00390000013762.b.a #32	ENSGT00940000159341 #33	ENSGT00940000158246 #34	ENSGT00390000006786 #35	ENSGT00550000074922 #36	ENSGT00600000085213	ENSGT00390000010738
Eutheria	ANCESTRAL SPECIES	9	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000164045	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #15	ENSGT00950000183100.B #14	ENSGT00940000153408.A #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #24	ENSGT00940000157084 #25	ENSGT00940000158672 #26	ENSGT00490000044373	ENSGT00950000182898.a.a.a.a.b #28	ENSGT01020000230401.a.a.a.i.b ##29	ENSGT01020000230401.a.a.a.i.a.a #29	ENSGT00940000157927 #30	ENSGT00940000159120 #31	ENSGT00390000013762.b.a #32	ENSGT00500000045766	ENSGT00940000159341 #33	ENSGT00940000158246 #34	ENSGT00390000006786 #35	ENSGT00550000074922 #36
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000154922.b #7	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #15	ENSGT00950000183100.B #14	ENSGT00940000153408.A #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #24	ENSGT00940000157084 #25	ENSGT00940000158672 #26	ENSGT00490000044373	ENSGT00950000182898.a.a.a.a.b #28	ENSGT01020000230401.a.a.a.i.a.a #29	ENSGT00940000157927 #30	ENSGT00940000159120 #31	ENSGT00390000013762.b.a #32	ENSGT00500000045766	ENSGT00940000159341 #33	ENSGT00940000158246 #34	ENSGT00390000006786 #35	ENSGT00550000074922 #36	ENSGT00390000010738
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00940000154922.b #7	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #15	ENSGT00950000183100.B #14	ENSGT00940000153408.A #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #24	ENSGT00940000157084 #25	ENSGT00940000158672 #26	ENSGT00490000044373	ENSGT00950000182898.a.a.a.a.b #28	ENSGT01020000230401.a.a.a.i.a.a #29	ENSGT00940000157927 #30	ENSGT00940000159120 #31	ENSGT00390000013762.b.a #32	ENSGT00940000159341 #33	ENSGT00940000158246 #34	ENSGT00390000006786 #35	ENSGT00550000074922 #36	ENSGT00390000010738	ENSGT00600000085213
Primates	ANCESTRAL SPECIES	5	ENSGT00940000154922.b #7	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #15	ENSGT00950000183100.B #14	ENSGT00940000153408.A #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #24	ENSGT00940000157084 #25	ENSGT00940000158672 #26	ENSGT00490000044373	ENSGT00950000182898.a.a.a.a.b #28	ENSGT01020000230401.a.a.a.i.a.a #29	ENSGT00940000157927 #30	ENSGT00940000159120 #31	ENSGT00390000013762.b.a #32	ENSGT00940000159341 #33	ENSGT00940000158246 #34	ENSGT00390000006786 #35	ENSGT00550000074922 #36	ENSGT00390000010738	ENSGT00940000160171
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00940000154922.b #7	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543 #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #15	ENSGT00950000183100.B #14	ENSGT00940000153408.A #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000001121 #24	ENSGT00940000157084 #25	ENSGT00940000158672 #26	ENSGT00490000044373	ENSGT00950000182898.a.a.a.a.b #28	ENSGT01020000230401.a.a.a.i.a.a #29	ENSGT00940000157927 #30	ENSGT00940000159120 #31	ENSGT00390000013762.b.a #32	ENSGT00940000159341 #33	ENSGT00940000158246 #34	ENSGT00390000006786 #35	ENSGT00550000074922 #36	ENSGT00390000010738	ENSGT00940000160171
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00940000154922.b #7	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543.e #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #15	ENSGT00950000183100.B #14	ENSGT00940000153408.A #16	ENSGT00940000157048 #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000005085 #23	ENSGT00390000001121 #24	ENSGT00940000157084 #25	ENSGT00940000158672 #26	ENSGT00490000044373	ENSGT00950000182898.a.a.a.a.b #28	ENSGT01020000230401.a.a.a.i.a.a #29	ENSGT00940000157927 #30	ENSGT00940000159120 #31	ENSGT00390000013762.b.a #32	ENSGT00940000159341 #33	ENSGT00940000158246 #34	ENSGT00390000006786 #35	ENSGT00550000074922 #36	ENSGT00390000001158 #37
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000154922.b #7	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543.e #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #15	ENSGT00950000183100.B #14	ENSGT00940000153408.A #16	ENSGT00940000157048.i #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000005085 #23	ENSGT00390000001121 #24	ENSGT00940000157084 #25	ENSGT00940000158672 #26	ENSGT00490000044373	ENSGT00950000182898.a.a.a.a.b #28	ENSGT01020000230401.a.a.a.i.a.a #29	ENSGT00940000157927 #30	ENSGT00940000159120 #31	ENSGT00390000013762.b.a #32	ENSGT00940000159341 #33	ENSGT00940000158246 #34	ENSGT00390000006786 #35	ENSGT00550000074922 #36	ENSGT00390000001158 #37
Cebidae	ANCESTRAL SPECIES	5	ENSGT00940000154922.b #7	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543.e #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #15	ENSGT00950000183100.B #14	ENSGT00940000153408.A #16	ENSGT00940000157048.i #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000005085 #23	ENSGT00390000001121 #24	ENSGT00940000157084 #25	ENSGT00940000158672 #26	ENSGT00490000044373	ENSGT00950000182898.a.a.a.a.b #28	ENSGT01020000230401.a.a.a.i.a.a.l #29	ENSGT00940000157927 #30	ENSGT00940000159120 #31	ENSGT00390000013762.b.a #32	ENSGT00940000159341 #33	ENSGT00940000158246 #34	ENSGT00390000006786 #35	ENSGT00550000074922 #36	ENSGT00390000001158 #37
Cebidae_a	ANCESTRAL SPECIES	25	ENSGT00940000154922.b #7	ENSGT00940000161321 #8	ENSGT00390000000614 #9	ENSGT00940000161082 #10	ENSGT00940000160761 #11	ENSGT00940000161543.e #12	ENSGT00390000003256 #13	ENSGT00940000153766.A #15	ENSGT00950000183100.B #14	ENSGT00940000153408.A #16	ENSGT00940000157048.i #17	ENSGT00940000155636 #18	ENSGT00390000003812 #19	ENSGT00390000018686 #20	ENSGT00390000006493 #21	ENSGT00940000157284 #22	ENSGT00390000005085 #23	ENSGT00390000001121 #24	ENSGT00940000157084 #25	ENSGT00940000158672 #26	ENSGT00490000044373	ENSGT00950000182898.a.a.a.a.b #28	ENSGT01020000230401.a.a.a.i.a.a.l #29	ENSGT00940000157927 #30	ENSGT00940000159120 #31	ENSGT00390000013762.b.a #32	ENSGT00940000159341 #33	ENSGT00940000158246 #34	ENSGT00390000006786 #35	ENSGT00550000074922 #36	ENSGT00390000001158 #37
Capuchin	MODERN SPECIES	197	SLC22A7 (ENSCCAG00000029157) #7	CRIP3 (ENSCCAG00000026017) #8	ZNF318 (ENSCCAG00000032591) #9	ABCC10 (ENSCCAG00000027143) #10	DLK2 (ENSCCAG00000033179) #11	TJAP1 (ENSCCAG00000020836) #12	LRRC73 (ENSCCAG00000024158) #13	POLR1C (ENSCCAG00000020169) #14	YIPF3 (ENSCCAG00000022689) #15	XPO5 (ENSCCAG00000017800) #16	POLH (ENSCCAG00000037764) #17	GTPBP2 (ENSCCAG00000034278) #18	ENSCCAG00000026449 #19	RSPH9 (ENSCCAG00000037740) #20	MRPS18A (ENSCCAG00000021108) #21	VEGFA (ENSCCAG00000032427) #22	ENSCCAG00000024490 #23	MRPL14 (ENSCCAG00000010453) #24	TMEM63B (ENSCCAG00000000296) #25	CAPN11 (ENSCCAG00000030442) #26	ENSCCAG00000036544 #27	SLC29A1 (ENSCCAG00000037630) #28	ENSCCAG00000028238 #29	SLC35B2 (ENSCCAG00000036364) #30	NFKBIE (ENSCCAG00000021383) #31	TMEM151B (ENSCCAG00000020071) #32	TCTE1 (ENSCCAG00000024271) #33	AARS2 (ENSCCAG00000034130) #34	SPATS1 (ENSCCAG00000034031) #35	CDC5L (ENSCCAG00000032324) #36	ENSCCAG00000027194 #37