Glires ANCESTRAL SPECIES ENSGT00940000154568 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00910000147158 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00390000008678 #29 ENSGT00940000155417 #31 ENSGT00940000159251 ENSGT01000000214434.F ENSGT00940000162061 ENSGT00940000157721 ENSGT00390000018245.d ENSGT00390000007027 ENSGT00940000158038 ENSGT00940000160247 Rodentia ANCESTRAL SPECIES ENSGT00940000154568 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00910000147158 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00390000008678 #29 ENSGT00940000155417 #31 ENSGT00940000159251 ENSGT01000000214434.F ENSGT00940000162061 ENSGT00940000157721 ENSGT00390000018245.d ENSGT00390000007027 ENSGT00940000158038 ENSGT00940000160247 Rodentia_B ANCESTRAL SPECIES ENSGT00940000154568 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00390000008678 #29 ENSGT00950000182879.b #30 ENSGT00940000155417 #31 ENSGT00940000159251 ENSGT01000000214434.F ENSGT00940000162061 ENSGT00940000157721 ENSGT00390000018245.d ENSGT00390000007027 ENSGT00940000158038 ENSGT00940000160247 Myomorpha ANCESTRAL SPECIES 55 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00860000136250 #16 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00390000008678 #29 ENSGT00950000182879.b #30 ENSGT00940000155417 #31 ENSGT00940000159251 ENSGT01000000214434.F ENSGT00940000162061 ENSGT00940000157721 ENSGT00390000018245.d Muroidea ANCESTRAL SPECIES 3 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00860000136250 #16 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00390000008678 #29 ENSGT00950000182879.b.a.a #30 ENSGT00950000182879.b.a.b.b #33 ENSGT00940000155417 #31 ENSGT00940000159251 ENSGT01000000214434.F ENSGT00940000162061 ENSGT00940000157721 ENSGT00390000018245.d Muroidea_A ANCESTRAL SPECIES 3 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00860000136250 #16 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00390000008678 #29 ENSGT00950000182879.b.a.a #30 ENSGT00940000155417.a.a #31 ENSGT00950000182879.b.a.b.a.a #32 ENSGT00940000155417.b ##31 ENSGT00950000182879.b.a.b.b #33 ENSGT00940000155417.a.b #37 ENSGT00940000159251 ENSGT00900000143271 ENSGT01000000214434.F ENSGT00940000162061 Murinae ANCESTRAL SPECIES 2 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00860000136250 #16 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00860000136320 #27 ENSGT00390000008678 #29 ENSGT00950000182879.b.a.a #30 ENSGT00940000155417.a.a #31 ENSGT00950000182879.b.a.b.b.d.a #35 ENSGT00950000182879.b.a.b.b.c #36 ENSGT00940000155417.a.b #37 ENSGT00940000159251 ENSGT00900000143271 ENSGT01000000214434.F ENSGT00940000162061 Mus ANCESTRAL SPECIES 3 ENSGT00860000135728 #7 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00860000136250 #16 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00860000136189 #21 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00860000136320 #27 ENSGT00860000135704 #28 ENSGT00390000008678 #29 ENSGT00950000182879.b.a.a #30 ENSGT00940000155417.a.a #31 ENSGT00950000182879.b.a.b.b.d.a #35 ENSGT00950000182879.b.a.b.b.c #36 ENSGT00940000155417.a.b #37 ENSGT00940000159251 ENSGT01000000214434.F ENSGT00940000162061 Mus_A ANCESTRAL SPECIES 3 ENSGT00860000135728 #7 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00860000136250 #16 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00860000136189 #21 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00860000136320 #27 ENSGT00860000135704 #28 ENSGT00390000008678 #29 ENSGT00950000182879.b.a.a #30 ENSGT00940000155417.a.a #31 ENSGT00950000182879.b.a.b.b.d.a #35 ENSGT00950000182879.b.a.b.b.c #36 ENSGT00940000155417.a.b #37 ENSGT00940000159251 ENSGT01000000214434.F ENSGT00940000162061 Mus_B ANCESTRAL SPECIES 5 ENSGT00860000135728 #7 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00860000136250 #16 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00860000136189 #21 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00860000136320 #27 ENSGT00860000135704 #28 ENSGT00390000008678 #29 ENSGT00950000182879.b.a.a #30 ENSGT00940000155417.a.a #31 ENSGT00950000182879.b.a.b.a.a #32 ENSGT00950000182879.b.a.b.b.d.b.b #33 ENSGT00950000182879.b.a.b.b.d.b.a #34 ENSGT00950000182879.b.a.b.b.d.a #35 ENSGT00950000182879.b.a.b.b.c #36 ENSGT00940000155417.a.b #37 Mus_C ANCESTRAL SPECIES 2 ENSGT00860000135728 #7 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00860000136250 #16 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00860000136189 #21 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00860000136320 #27 ENSGT00860000135704 #28 ENSGT00390000008678 #29 ENSGT00950000182879.b.a.a #30 ENSGT00940000155417.a.a #31 ENSGT00950000182879.b.a.b.a.a #32 ENSGT00950000182879.b.a.b.b.d.b.b #33 ENSGT00950000182879.b.a.b.b.d.b.a #34 ENSGT00950000182879.b.a.b.b.d.a #35 ENSGT00950000182879.b.a.b.b.c #36 ENSGT00940000155417.a.b #37 spretus MODERN SPECIES 13 MGP_SPRETEiJ_G0027170 #7 Cachd1 (MGP_SPRETEiJ_G0027169) #8 Ube2u (MGP_SPRETEiJ_G0027168) #9 Ror1 (MGP_SPRETEiJ_G0027167) #10 Pgm1 (MGP_SPRETEiJ_G0027166) #11 Efcab7 (MGP_SPRETEiJ_G0027165) #12 Itgb3bp (MGP_SPRETEiJ_G0027164) #13 Alg6 (MGP_SPRETEiJ_G0027163) #14 Foxd3 (MGP_SPRETEiJ_G0027162) #15 MGP_SPRETEiJ_G0027160 #16 Atg4c (MGP_SPRETEiJ_G0027159) #17 Angptl3 (MGP_SPRETEiJ_G0027158) #18 Dock7 (MGP_SPRETEiJ_G0027157) #19 MGP_SPRETEiJ_G0027156 #20 I0C0044D17Rik (MGP_SPRETEiJ_G0027155) #21 Kank4 (MGP_SPRETEiJ_G0027154) #22 L1td1 (MGP_SPRETEiJ_G0027153) #23 Patj (MGP_SPRETEiJ_G0027152) #24 Tm2d1 (MGP_SPRETEiJ_G0027151) #25 Nfia (MGP_SPRETEiJ_G0027150) #26 MGP_SPRETEiJ_G0027149 #27 MGP_SPRETEiJ_G0027148 #28 Gm12695 (MGP_SPRETEiJ_G0027147) #29 Cyp2j5 (MGP_SPRETEiJ_G0027146) #30 Cyp2j9 (MGP_SPRETEiJ_G0027145) #31 Cyp2j6 (MGP_SPRETEiJ_G0027144) #32 Cyp2j8 (MGP_SPRETEiJ_G0027143) #33 Cyp2j11 (MGP_SPRETEiJ_G0027142) #34 Cyp2j7 (MGP_SPRETEiJ_G0027141) #35 Cyp2j12 (MGP_SPRETEiJ_G0027140) #36 Cyp2j13 (MGP_SPRETEiJ_G0027139) #37 Steppe mouse MODERN SPECIES 2911 I0C0044D17Rik (ENSMSIG00000019204) #21 Kank4 (ENSMSIG00000019176) #22 L1td1 (ENSMSIG00000019160) #23 ENSMSIG00000019136 Patj (ENSMSIG00000018343) #24 Tm2d1 (ENSMSIG00000018301) #25 Nfia (ENSMSIG00000018111) #26 ENSMSIG00000018081 #27 Mouse MODERN SPECIES 13 Jak1 (ENSMUSG00000028530) Raver2 (ENSMUSG00000035275) Cachd1 (ENSMUSG00000028532) #8 Ube2u (ENSMUSG00000069733) #9 Ror1 (ENSMUSG00000035305) #10 Pgm1 (ENSMUSG00000025791) #11 Efcab7 (ENSMUSG00000073791) #12 Itgb3bp (ENSMUSG00000028549) #13 Alg6 (ENSMUSG00000073792) #14 Foxd3 (ENSMUSG00000067261) #15 Atg4c (ENSMUSG00000028550) #17 Angptl3 (ENSMUSG00000028553) #18 Dock7 (ENSMUSG00000028556) #19 Usp1 (ENSMUSG00000028560) #20 I0C0044D17Rik (ENSMUSG00000073794) #21 Kank4 (ENSMUSG00000035407) #22 L1td1 (ENSMUSG00000087166) #23 Patj (ENSMUSG00000061859) #24 Tm2d1 (ENSMUSG00000028563) #25 Nfia (ENSMUSG00000028565) #26 E130114P18Rik (ENSMUSG00000048747) #27 Gm12695 (ENSMUSG00000078639) #29 Cyp2j5 (ENSMUSG00000052520) #30 Cyp2j9 (ENSMUSG00000015224) #31 Cyp2j6 (ENSMUSG00000052914) #32 Cyp2j8 (ENSMUSG00000082932) #33 Cyp2j11 (ENSMUSG00000066097) #34 Cyp2j7 (ENSMUSG00000081362) #35 Cyp2j12 (ENSMUSG00000081225) #36 Cyp2j13 (ENSMUSG00000028571) #37 Hook1 (ENSMUSG00000028572) Ryukyu mouse MODERN SPECIES 13 MGP_CAROLIEiJ_G0026201 #7 Cachd1 (MGP_CAROLIEiJ_G0026200) #8 Ube2u (MGP_CAROLIEiJ_G0026199) #9 Ror1 (MGP_CAROLIEiJ_G0026198) #10 Pgm1 (MGP_CAROLIEiJ_G0026197) #11 MGP_CAROLIEiJ_G0026196 #12 Itgb3bp (MGP_CAROLIEiJ_G0026195) #13 Alg6 (MGP_CAROLIEiJ_G0026194) #14 Foxd3 (MGP_CAROLIEiJ_G0026193) #15 MGP_CAROLIEiJ_G0026192 #16 Atg4c (MGP_CAROLIEiJ_G0026191) #17 Angptl3 (MGP_CAROLIEiJ_G0026190) #18 Dock7 (MGP_CAROLIEiJ_G0026189) #19 MGP_CAROLIEiJ_G0026188 #20 MGP_CAROLIEiJ_G0026187 #21 Kank4 (MGP_CAROLIEiJ_G0026186) #22 L1td1 (MGP_CAROLIEiJ_G0026185) #23 Patj (MGP_CAROLIEiJ_G0026184) #24 Tm2d1 (MGP_CAROLIEiJ_G0026183) #25 Nfia (MGP_CAROLIEiJ_G0026182) #26 MGP_CAROLIEiJ_G0026181 #27 MGP_CAROLIEiJ_G0026180 #28 Gm12695 (MGP_CAROLIEiJ_G0026179) #29 Cyp2j5 (MGP_CAROLIEiJ_G0026178) #30 Cyp2j9 (MGP_CAROLIEiJ_G0026177) #31 MGP_CAROLIEiJ_G0026176 #32 Cyp2j7 (MGP_CAROLIEiJ_G0026175) #35 Cyp2j12 (MGP_CAROLIEiJ_G0026174) #36 Cyp2j13 (MGP_CAROLIEiJ_G0026173) #37 Hook1 (MGP_CAROLIEiJ_G0026172) Fggy (MGP_CAROLIEiJ_G0026171) Shrew mouse MODERN SPECIES 19 MGP_PahariEiJ_G0028538 #7 Cachd1 (MGP_PahariEiJ_G0028537) #8 MGP_PahariEiJ_G0028536 #9 Ror1 (MGP_PahariEiJ_G0028535) #10 Pgm1 (MGP_PahariEiJ_G0028534) #11 MGP_PahariEiJ_G0028533 #12 Itgb3bp (MGP_PahariEiJ_G0028532) #13 Alg6 (MGP_PahariEiJ_G0028531) #14 Foxd3 (MGP_PahariEiJ_G0028530) #15 MGP_PahariEiJ_G0028529 #16 Atg4c (MGP_PahariEiJ_G0028528) #17 Angptl3 (MGP_PahariEiJ_G0028527) #18 Dock7 (MGP_PahariEiJ_G0028526) #19 Usp1 (MGP_PahariEiJ_G0028525) #20 MGP_PahariEiJ_G0028524 #21 Kank4 (MGP_PahariEiJ_G0028523) #22 L1td1 (MGP_PahariEiJ_G0028522) #23 Patj (MGP_PahariEiJ_G0028521) #24 Tm2d1 (MGP_PahariEiJ_G0028520) #25 Nfia (MGP_PahariEiJ_G0028519) #26 MGP_PahariEiJ_G0028518 #27 MGP_PahariEiJ_G0028517 #28 Gm12695 (MGP_PahariEiJ_G0028516) #29 Cyp2j5 (MGP_PahariEiJ_G0028515) #30 Cyp2j9 (MGP_PahariEiJ_G0028514) #31 Cyp2j6 (MGP_PahariEiJ_G0028513) #32 Cyp2j7 (MGP_PahariEiJ_G0028512) #35 Cyp2j12 (MGP_PahariEiJ_G0028511) #36 Cyp2j13 (MGP_PahariEiJ_G0028510) #37 Hook1 (MGP_PahariEiJ_G0028509) Fggy (MGP_PahariEiJ_G0028508) Rat MODERN SPECIES 15 Jak1 (ENSRNOG00000011157) Raver2 (ENSRNOG00000023812) Cachd1 (ENSRNOG00000010514) #8 Ube2u (ENSRNOG00000023895) #9 Ror1 (ENSRNOG00000029449) #10 Pgm1 (ENSRNOG00000009889) #11 Efcab7 (ENSRNOG00000009782) #12 Itgb3bp (ENSRNOG00000009116) #13 Alg6 (ENSRNOG00000009045) #14 Foxd3 (ENSRNOG00000066522) #15 ENSRNOG00000064901 Atg4c (ENSRNOG00000008767) #17 Angptl3 (ENSRNOG00000008638) #18 Dock7 (ENSRNOG00000008298) #19 Usp1 (ENSRNOG00000007890) #20 Kank4 (ENSRNOG00000007779) #22 L1td1 (ENSRNOG00000050670) #23 Patj (ENSRNOG00000007551) #24 Tm2d1 (ENSRNOG00000007527) #25 AABR07049329.1 (ENSRNOG00000030107) Nfia (ENSRNOG00000006966) #26 ENSRNOG00000065127 #27 C5h1orf87 (ENSRNOG00000026169) #29 Cyp2j3 (ENSRNOG00000031004) #31 Cyp2j16 (ENSRNOG00000030466) #35 Cyp2j10 (ENSRNOG00000042224) #36 ENSRNOG00000070878 ##30 Hook1 (ENSRNOG00000026226) AABR07049299.1 (ENSRNOG00000026234) Fggy (ENSRNOG00000008907) Jun (ENSRNOG00000026293) Cricetidae ANCESTRAL SPECIES 2 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00860000136250 #16 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00390000008678 #29 ENSGT00950000182879.b.a.b.a.b ##30 ENSGT00950000182879.b.a.b.a.a #32 ENSGT00940000155417.b ##31 ENSGT00950000182879.b.a.b.b #33 ENSGT00940000155417.a.b #37 ENSGT00940000159251 ENSGT00900000143271 ENSGT01000000214434.F ENSGT00940000162061 ENSGT00940000157721 Cricetinae ANCESTRAL SPECIES 5 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00860000136250 #16 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00390000008678 #29 ENSGT00950000182879.b.a.b.a.b ##30 ENSGT00950000182879.b.a.b.a.a #32 ENSGT00940000155417.b ##31 ENSGT00950000182879.b.a.a #30 ENSGT00940000159251 ENSGT00900000143271 ENSGT01000000214434.F ENSGT00940000162061 ENSGT00940000157721 ENSGT00390000010786 Golden Hamster MODERN SPECIES 662 Pgm1 (ENSMAUG00000000807) #11 Efcab7 (ENSMAUG00000012770) #12 Itgb3bp (ENSMAUG00000019227) #13 Alg6 (ENSMAUG00000018206) #14 Foxd3 (ENSMAUG00000008235) #15 ENSMAUG00000011992 #16 Atg4c (ENSMAUG00000017548) #17 Angptl3 (ENSMAUG00000006669) #18 Dock7 (ENSMAUG00000005545) #19 Usp1 (ENSMAUG00000010459) #20 Kank4 (ENSMAUG00000020783) #22 L1td1 (ENSMAUG00000020769) #23 Patj (ENSMAUG00000021478) #24 Tm2d1 (ENSMAUG00000017246) #25 Nfia (ENSMAUG00000012950) #26 Gm12695 (ENSMAUG00000020018) #29 ENSMAUG00000003529 ##30 Cyp2j6 (ENSMAUG00000021242) #32 ENSMAUG00000021213 ##31 ENSMAUG00000008711 #30 Hook1 (ENSMAUG00000017707) Fggy (ENSMAUG00000019211) Jun (ENSMAUG00000007038) ENSMAUG00000014400 Mysm1 (ENSMAUG00000014841) Eqtn (ENSMAUG00000015891) Chinese hamster chok1gshd MODERN SPECIES 111 Cachd1 (ENSCGRG00001024125) #8 Ube2u (ENSCGRG00001024744) #9 ENSCGRG00001023231 Ror1 (ENSCGRG00001015667) #10 Pgm1 (ENSCGRG00001024185) #11 Efcab7 (ENSCGRG00001013291) #12 Itgb3bp (ENSCGRG00001023317) #13 Alg6 (ENSCGRG00001024513) #14 Foxd3 (ENSCGRG00001009393) #15 ENSCGRG00001002098 #16 Atg4c (ENSCGRG00001000630) #17 ENSCGRG00001002780 Dock7 (ENSCGRG00001017762) #19 Angptl3 (ENSCGRG00001024053) #18 Usp1 (ENSCGRG00001018963) #20 Kank4 (ENSCGRG00001023583) #22 L1td1 (ENSCGRG00001024238) #23 Patj (ENSCGRG00001024524) #24 ENSCGRG00001014726 Tm2d1 (ENSCGRG00001017276) #25 Nfia (ENSCGRG00001000754) #26 Gm12695 (ENSCGRG00001014021) #29 ENSCGRG00001015523 ##30 Cyp2j6 (ENSCGRG00001017724) #32 ENSCGRG00001020085 ##31 ENSCGRG00001005478 #30 Hook1 (ENSCGRG00001001100) ENSCGRG00001008656 Fggy (ENSCGRG00001024005) Jun (ENSCGRG00001011810) Mysm1 (ENSCGRG00001015762) Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00860000136250 #16 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00390000008678 #29 ENSGT00950000182879.b.a.b.a.b ##30 ENSGT00950000182879.b.a.b.a.a #32 ENSGT00940000155417.b ##31 ENSGT00950000182879.b.a.b.b #33 ENSGT00940000155417.a.b #37 ENSGT00940000159251 ENSGT00900000143271 ENSGT01000000214434.F ENSGT00940000162061 ENSGT00940000157721 Northern American deer mouse MODERN SPECIES 11 Raver2 (ENSPEMG00000001332) Cachd1 (ENSPEMG00000018442) #8 ENSPEMG00000024764 ENSPEMG00000028140 #9 Ror1 (ENSPEMG00000009106) #10 Pgm1 (ENSPEMG00000000464) #11 Efcab7 (ENSPEMG00000018535) #12 Itgb3bp (ENSPEMG00000011292) #13 Alg6 (ENSPEMG00000018498) #14 ENSPEMG00000016606 ENSPEMG00000026760 Atg4c (ENSPEMG00000012725) #17 Angptl3 (ENSPEMG00000000689) #18 Dock7 (ENSPEMG00000018126) #19 Usp1 (ENSPEMG00000026352) #20 Kank4 (ENSPEMG00000012891) #22 L1td1 (ENSPEMG00000008068) #23 Patj (ENSPEMG00000014313) #24 Tm2d1 (ENSPEMG00000004612) #25 Nfia (ENSPEMG00000005756) #26 Gm12695 (ENSPEMG00000010497) #29 ENSPEMG00000009838 #30 ENSPEMG00000026151 ##31 Cyp2j9 (ENSPEMG00000000230) #31 Cyp2j6 (ENSPEMG00000017727) #32 ENSPEMG00000013709 #33 ENSPEMG00000012209 #33 Cyp2j13 (ENSPEMG00000018564) #37 Hook1 (ENSPEMG00000003851) ENSPEMG00000026283 Fggy (ENSPEMG00000007085) Prairie vole MODERN SPECIES 1 Raver2 (ENSMOCG00000018087) Cachd1 (ENSMOCG00000020004) #8 ENSMOCG00000013769 #9 ENSMOCG00000009548 Ror1 (ENSMOCG00000010797) #10 Pgm1 (ENSMOCG00000011278) #11 Efcab7 (ENSMOCG00000005332) #12 Itgb3bp (ENSMOCG00000020964) #13 Alg6 (ENSMOCG00000007266) #14 Foxd3 (ENSMOCG00000003755) #15 ENSMOCG00000021953 #16 Atg4c (ENSMOCG00000013316) #17 Angptl3 (ENSMOCG00000010506) #18 Dock7 (ENSMOCG00000012407) #19 Usp1 (ENSMOCG00000013703) #20 Kank4 (ENSMOCG00000020622) #22 L1td1 (ENSMOCG00000007037) #23 Patj (ENSMOCG00000020085) #24 Tm2d1 (ENSMOCG00000007667) #25 ENSMOCG00000008446 Nfia (ENSMOCG00000007715) #26 Gm12695 (ENSMOCG00000013607) #29 ENSMOCG00000010318 ##30 Cyp2j6 (ENSMOCG00000018597) #32 ENSMOCG00000005805 ##31 Or13p8 (ENSMOCG00000008289) ENSMOCG00000012714 ENSMOCG00000022413 ENSMOCG00000015307 Lao1 (ENSMOCG00000001605) Slc2a1 (ENSMOCG00000021632) Upper Galilee mountains blind mole rat MODERN SPECIES 547 ENSNGAG00000005477 #22 L1td1 (ENSNGAG00000000776) #23 ENSNGAG00000019752 #24 Lesser Egyptian jerboa MODERN SPECIES 98 Jak1 (ENSJJAG00000022247) Raver2 (ENSJJAG00000000374) ENSJJAG00000002474 Cachd1 (ENSJJAG00000007547) #8 ENSJJAG00000009546 Ror1 (ENSJJAG00000010121) #10 Pgm1 (ENSJJAG00000011313) #11 Efcab7 (ENSJJAG00000011831) #12 Alg6 (ENSJJAG00000012437) #14 Foxd3 (ENSJJAG00000015766) #15 ENSJJAG00000016061 #16 Atg4c (ENSJJAG00000016837) #17 Dock7 (ENSJJAG00000011659) #19 Angptl3 (ENSJJAG00000016186) #18 Usp1 (ENSJJAG00000017329) #20 ENSJJAG00000019020 #22 Patj (ENSJJAG00000022235) #24 Tm2d1 (ENSJJAG00000008343) #25 ENSJJAG00000010329 Nfia (ENSJJAG00000012495) #26 ENSJJAG00000013782 ENSJJAG00000016141 ENSJJAG00000016230 ENSJJAG00000016631 #31 Hook1 (ENSJJAG00000017805) Fggy (ENSJJAG00000021024) ENSJJAG00000022820 Jun (ENSJJAG00000001078) ENSJJAG00000016007 Mysm1 (ENSJJAG00000016612) Tacstd2 (ENSJJAG00000014125) Kangaroo rat MODERN SPECIES 370 Pde4b (ENSDORG00000010712) Leprot (ENSDORG00000005691) Dnajc6 (ENSDORG00000005685) Ak4 (ENSDORG00000023966) Jak1 (ENSDORG00000013462) Raver2 (ENSDORG00000002498) Cachd1 (ENSDORG00000011104) #8 Ror1 (ENSDORG00000014715) #10 Pgm1 (ENSDORG00000006501) #11 Efcab7 (ENSDORG00000013731) #12 Alg6 (ENSDORG00000013729) #14 Atg4c (ENSDORG00000027209) #17 Angptl3 (ENSDORG00000008279) #18 Dock7 (ENSDORG00000008269) #19 Usp1 (ENSDORG00000008268) #20 ENSDORG00000029852 #22 Snrnp40 (ENSDORG00000004126) Zcchc17 (ENSDORG00000004128) Fabp3 (ENSDORG00000024318) Serinc2 (ENSDORG00000001817) Ldc1 (ENSDORG00000029290) Tinagl1 (ENSDORG00000014387) Hcrtr1 (ENSDORG00000014389) Pef1 (ENSDORG00000014391) ENSDORG00000014393 ENSDORG00000026075 Adgrb2 (ENSDORG00000014398) ENSDORG00000014399 Ptp4a2 (ENSDORG00000029587) Khdrbs1 (ENSDORG00000011530) Tmem39b (ENSDORG00000015092) Rodentia_A ANCESTRAL SPECIES ENSGT00940000154568 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00910000147158 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00390000008678 #29 ENSGT00940000155417 #31 ENSGT00940000159251 ENSGT01000000214434.F ENSGT00940000162061 ENSGT00940000157721 ENSGT00390000018245.d ENSGT00390000007027 ENSGT00940000158038 ENSGT00940000160247 Hystricomorpha ANCESTRAL SPECIES 44 ENSGT00940000154568 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00530000063000.a.a.a #17 ENSGT00940000155661 #19 ENSGT00940000156746 #18 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 Hystricomorpha_a ANCESTRAL SPECIES 14 ENSGT00940000158755 ENSGT00940000154568 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00530000063000.a.a.a #17 ENSGT00940000155661 #19 ENSGT00940000156746 #18 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 Guinea pig MODERN SPECIES 2 ENSCPOG00000037978 JAK1 (ENSCPOG00000005991) RAVER2 (ENSCPOG00000005986) CACHD1 (ENSCPOG00000011700) #8 ENSCPOG00000010304 #9 ROR1 (ENSCPOG00000034531) #10 PGM1 (ENSCPOG00000022261) #11 EFCAB7 (ENSCPOG00000015458) #12 ITGB3BP (ENSCPOG00000034564) #13 ALG6 (ENSCPOG00000005163) #14 ATG4C (ENSCPOG00000001607) #17 DOCK7 (ENSCPOG00000006170) #19 ENSCPOG00000027140 ANGPTL3 (ENSCPOG00000006192) #18 USP1 (ENSCPOG00000010416) #20 KANK4 (ENSCPOG00000039764) #22 PATJ (ENSCPOG00000024891) #24 TM2D1 (ENSCPOG00000012287) #25 NFIA (ENSCPOG00000010091) #26 ENSCPOG00000036581 STOM (ENSCPOG00000034024) GSN (ENSCPOG00000008387) RAB14 (ENSCPOG00000036631) CNTRL (ENSCPOG00000006668) C5 (ENSCPOG00000002250) TRAF1 (ENSCPOG00000037365) PHF19 (ENSCPOG00000002245) ENSCPOG00000033823 PSMD5 (ENSCPOG00000025689) B3GALT9 (ENSCPOG00000021101) FBXW2 (ENSCPOG00000035293) Hystricomorpha_b ANCESTRAL SPECIES 6 ENSGT00940000158755 ENSGT00940000154568 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT01050000244818 #23 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 Long-tailed chinchilla MODERN SPECIES 130 LEPROT (ENSCLAG00000008136) DNAJC6 (ENSCLAG00000008413) ENSCLAG00000005491 JAK1 (ENSCLAG00000006227) RAVER2 (ENSCLAG00000006590) CACHD1 (ENSCLAG00000007901) #8 ROR1 (ENSCLAG00000010126) #10 PGM1 (ENSCLAG00000008744) #11 EFCAB7 (ENSCLAG00000009320) #12 ITGB3BP (ENSCLAG00000004361) #13 ENSCLAG00000005099 #14 ATG4C (ENSCLAG00000005419) #17 DOCK7 (ENSCLAG00000006534) #19 ANGPTL3 (ENSCLAG00000011792) #18 USP1 (ENSCLAG00000009389) #20 KANK4 (ENSCLAG00000004374) #22 ENSCLAG00000005428 #23 PATJ (ENSCLAG00000005694) #24 TM2D1 (ENSCLAG00000005321) #25 NFIA (ENSCLAG00000005937) #26 ENSCLAG00000005718 Degu MODERN SPECIES 98 CACHD1 (ENSODEG00000004991) #8 ENSODEG00000004610 #9 ROR1 (ENSODEG00000004832) #10 ENSODEG00000005033 PGM1 (ENSODEG00000005752) #11 ENSODEG00000005465 #12 ENSODEG00000019103 ITGB3BP (ENSODEG00000005479) #13 ENSODEG00000005048 #14 ATG4C (ENSODEG00000005462) #17 ENSODEG00000019085 ANGPTL3 (ENSODEG00000005471) #18 ENSODEG00000005344 DOCK7 (ENSODEG00000004836) #19 ENSODEG00000007065 #20 ENSODEG00000006862 #22 PATJ (ENSODEG00000004922) #24 TM2D1 (ENSODEG00000004635) #25 NFIA (ENSODEG00000005024) #26 ENSODEG00000004370 ENSODEG00000004158 Sciuridae ANCESTRAL SPECIES 3 ENSGT00940000154568 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00910000147158 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00390000008678 #29 ENSGT00940000155417 #31 ENSGT00940000159251 ENSGT01000000214434.F ENSGT00940000162061 ENSGT00940000157721 ENSGT00390000018245.d ENSGT00390000007027 ENSGT00940000158038 ENSGT00940000160247 ENSGT00940000160126 Eurasian red squirrel MODERN SPECIES ENSSVLG00005008103 #11 ENSSVLG00005008005 #11 EFCAB7 (ENSSVLG00005007917) #12 ITGB3BP (ENSSVLG00005007854) #13 ALG6 (ENSSVLG00005007804) #14 ENSSVLG00005007774 FOXD3 (ENSSVLG00005007758) #15 ENSSVLG00005007744 ATG4C (ENSSVLG00005007673) #17 ENSSVLG00005007657 ENSSVLG00005007631 ENSSVLG00005007602 ANGPTL3 (ENSSVLG00005007525) #18 DOCK7 (ENSSVLG00005005302) #19 USP1 (ENSSVLG00005004642) #20 KANK4 (ENSSVLG00005004588) #22 L1TD1 (ENSSVLG00005004562) #23 ENSSVLG00005004503 PATJ (ENSSVLG00005004098) #24 TM2D1 (ENSSVLG00005003968) #25 NFIA (ENSSVLG00005003823) #26 C1orf87 (ENSSVLG00005003680) #29 CYP2J2 (ENSSVLG00005003643) #31 HOOK1 (ENSSVLG00005003597) FGGY (ENSSVLG00005003528) JUN (ENSSVLG00005003485) ENSSVLG00005003468 ENSSVLG00005003426 ENSSVLG00005003403 TACSTD2 (ENSSVLG00005003391) OMA1 (ENSSVLG00005003366) Marmotini ANCESTRAL SPECIES ENSGT00940000154568 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT00940000155136 #24 ENSGT00390000009895.i.b.b ENSGT00940000157668 #25 ENSGT00910000147158 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00390000008678 #29 ENSGT00940000155417 #31 ENSGT00940000159251 ENSGT01000000214434.F ENSGT00940000162061 ENSGT00940000157721 ENSGT00390000018245.d ENSGT00390000007027 ENSGT00940000158038 ENSGT00940000160247 Marmotini_b ANCESTRAL SPECIES 206 ENSGT00940000154568 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000161645.b #15 ENSGT00530000063000.a.a.a #17 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 Arctic ground squirrel MODERN SPECIES 393 ENSUPAG00010016215 #9 ROR1 (ENSUPAG00010016191) #10 PGM1 (ENSUPAG00010016171) #11 EFCAB7 (ENSUPAG00010016164) #12 ITGB3BP (ENSUPAG00010016157) #13 ALG6 (ENSUPAG00010016149) #14 FOXD3 (ENSUPAG00010016144) #15 ATG4C (ENSUPAG00010016097) #17 ANGPTL3 (ENSUPAG00010016086) #18 DOCK7 (ENSUPAG00010015703) #19 USP1 (ENSUPAG00010015671) #20 ENSUPAG00010015659 #22 Alpin marmot MODERN SPECIES 174 ENSMMMG00000003981 #22 Lagomorpha ANCESTRAL SPECIES 8 ENSGT00390000006503.a ENSGT00940000158755 ENSGT00940000154568 ENSGT00940000157092 ENSGT00940000158648 ENSGT00940000157568 #8 ENSGT00940000162256 #9 ENSGT00940000153947.B #10 ENSGT00940000155542.b #11 ENSGT00390000015466 #12 ENSGT00390000004336 #13 ENSGT00940000153733.B #14 ENSGT00940000156746 #18 ENSGT00940000155661 #19 ENSGT00910000144243 #20 ENSGT00940000158468 #22 ENSGT00940000155136 #24 ENSGT00940000157668 #25 ENSGT00950000182916.a.b.a.a.a.a #26 ENSGT00390000008678 #29 ENSGT00940000155417 #31 ENSGT00940000159251 ENSGT00940000162061 ENSGT00940000157721 ENSGT00390000018245.d ENSGT00390000007027 ENSGT00940000158038 ENSGT00940000160247 ENSGT00940000160126 ENSGT00530000063460.A.a ENSGT01010000222787 Rabbit MODERN SPECIES 4 CACHD1 (ENSOCUG00000015532) #8 ENSOCUG00000003109 UBE2U (ENSOCUG00000000932) #9 ROR1 (ENSOCUG00000023790) #10 ENSOCUG00000031933 PGM1 (ENSOCUG00000038711) #11 EFCAB7 (ENSOCUG00000000286) #12 ITGB3BP (ENSOCUG00000035590) #13 ALG6 (ENSOCUG00000000281) #14 ENSOCUG00000036422 ATG4C (ENSOCUG00000007695) #17 DOCK7 (ENSOCUG00000012948) #19 ANGPTL3 (ENSOCUG00000000906) #18 ENSOCUG00000035373 USP1 (ENSOCUG00000012942) #20 KANK4 (ENSOCUG00000007701) #22 PATJ (ENSOCUG00000015766) #24 TM2D1 (ENSOCUG00000010235) #25 ENSOCUG00000035109 NFIA (ENSOCUG00000005893) #26 ENSOCUG00000016077 #29 CYP2J1 (ENSOCUG00000004199) #31 HOOK1 (ENSOCUG00000004180) ENSOCUG00000000936 JUN (ENSOCUG00000001212) MYSM1 (ENSOCUG00000029356) TACSTD2 (ENSOCUG00000013892) OMA1 (ENSOCUG00000013456) ENSOCUG00000026072 GEMIN8 (ENSOCUG00000022328) DAB1 (ENSOCUG00000017204) Pika MODERN SPECIES 1185 KANK4 (ENSOPRG00000010527) #22