Theria	ANCESTRAL SPECIES	23	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000156959.A	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00970000198057 #31	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Eutheria	ANCESTRAL SPECIES	7	ENSGT00940000159718	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000164320	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.a ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00940000153294.m.a.c.b	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000014818 #14	ENSGT00940000155193.a.a.f #15	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Glires	ANCESTRAL SPECIES	9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00940000153294.m.a.c.b	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000014818 #14	ENSGT00940000155193.a.a.f #15	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Rodentia	ANCESTRAL SPECIES	9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00940000153294.m.a.c.b	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000014818 #14	ENSGT00940000155193.a.a.f #15	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000014818 #14	ENSGT00940000155193.a.a.f #15	ENSGT00940000153294.m.a.c.b	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Hystricomorpha	ANCESTRAL SPECIES	7	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000014818 #14	ENSGT00940000155193.a.a.f #15	ENSGT00940000153294.m.a.c.b	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Naked mole-rat female	MODERN SPECIES	3	CACFD1 (ENSHGLG00000019453) #7	ADAMTS13 (ENSHGLG00000016856) #8	REXO4 (ENSHGLG00000016901) #9	ENSHGLG00000039152 #10	SURF4 (ENSHGLG00000042282) #11	SURF2 (ENSHGLG00000019109) #12	SURF1 (ENSHGLG00000014684) #13	ENSHGLG00000038677 #14	ENSHGLG00000013590 #15	ENSHGLG00000013372 #16	ENSHGLG00000032558 #17	ENSHGLG00000050990 #18	ENSHGLG00000012618 #19	AGPAT2 (ENSHGLG00000018608) #20	EGFL7 (ENSHGLG00000019272) #21	NOTCH1 (ENSHGLG00000011967) #22	SEC16A (ENSHGLG00000019238) #23	INPP5E (ENSHGLG00000014038) #24	PMPCA (ENSHGLG00000012489) #25	ENSHGLG00000018437 #26	SNAPC4 (ENSHGLG00000019312) #27	CARD9 (ENSHGLG00000013369) #28	ENSHGLG00000013032 #29	GPSM1 (ENSHGLG00000012552) #30	ENSHGLG00000036858 #31	ENSHGLG00000049520 #32	QSOX2 (ENSHGLG00000014265) #33	LHX3 (ENSHGLG00000013639) #34	TMEM250 (ENSHGLG00000012475) #35	ENSHGLG00000037882 #36	UBAC1 (ENSHGLG00000012793) #37
Hystricomorpha_a	ANCESTRAL SPECIES	5	ENSGT00940000159976	ENSGT00390000000529 #7	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT01050000244868.a.a.a.a.a.b.l ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Hystricomorpha_b	ANCESTRAL SPECIES	36	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT01050000244868.a.a.a.a.a.b.k.a ##18	ENSGT01050000244868.a.a.a.a.a.b.k.b ##18	ENSGT01050000244868.a.a.a.a.a.b.l ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Long-tailed chinchilla	MODERN SPECIES	220	SARDH (ENSCLAG00000004708)	VAV2 (ENSCLAG00000004486)	ENSCLAG00000017720	BRD3 (ENSCLAG00000005354)	WDR5 (ENSCLAG00000006850)	RXRA (ENSCLAG00000004314)	COL5A1 (ENSCLAG00000006614)	FCN1 (ENSCLAG00000014782)	PPP1R26 (ENSCLAG00000017970)	PIERCE1 (ENSCLAG00000009620)	MRPS2 (ENSCLAG00000005994)	LCN10 (ENSCLAG00000006244) ##18	DIPK1B (ENSCLAG00000007182) #19	AGPAT2 (ENSCLAG00000007355) #20	EGFL7 (ENSCLAG00000007758) #21	NOTCH1 (ENSCLAG00000006372) #22	SEC16A (ENSCLAG00000007897) #23	INPP5E (ENSCLAG00000004323) #24	PMPCA (ENSCLAG00000005003) #25	ENTR1 (ENSCLAG00000005304) #26	SNAPC4 (ENSCLAG00000007809) #27	CARD9 (ENSCLAG00000006761) #28	DNLZ (ENSCLAG00000007124) #29	GPSM1 (ENSCLAG00000014059) #30	ENSCLAG00000006606	QSOX2 (ENSCLAG00000006564) #33	LHX3 (ENSCLAG00000007641) #34	TMEM250 (ENSCLAG00000008047) #35	NACC2 (ENSCLAG00000008816) #36	UBAC1 (ENSCLAG00000012458) #37	CAMSAP1 (ENSCLAG00000005984)
Degu	MODERN SPECIES	164	SLC2A6 (ENSODEG00000016923)	CACFD1 (ENSODEG00000015773) #7	ADAMTS13 (ENSODEG00000016041) #8	REXO4 (ENSODEG00000015721) #9	STKLD1 (ENSODEG00000015481)	SURF4 (ENSODEG00000015392) #11	SURF2 (ENSODEG00000015768) #12	SURF1 (ENSODEG00000016201) #13	ENSODEG00000016465	MED22 (ENSODEG00000015723) #16	SURF6 (ENSODEG00000015789) #17	ENSODEG00000015745 ##18	DIPK1B (ENSODEG00000015451) #19	AGPAT2 (ENSODEG00000015549) #20	EGFL7 (ENSODEG00000016479) #21	NOTCH1 (ENSODEG00000015576) #22	SEC16A (ENSODEG00000015396) #23	INPP5E (ENSODEG00000015384) #24	PMPCA (ENSODEG00000014945) #25	ENSODEG00000015730 #26	ENSODEG00000015531 #26	CARD9 (ENSODEG00000015926) #28	DNLZ (ENSODEG00000015199) #29	GPSM1 (ENSODEG00000015347) #30	QSOX2 (ENSODEG00000014987) #33	LHX3 (ENSODEG00000016123) #34	TMEM250 (ENSODEG00000020385) #35	NACC2 (ENSODEG00000015683) #36	UBAC1 (ENSODEG00000015106) #37	CAMSAP1 (ENSODEG00000014924)	ENSODEG00000014902
Guinea pig	MODERN SPECIES	18	MYMK (ENSCPOG00000021725)	SLC2A6 (ENSCPOG00000011691)	CACFD1 (ENSCPOG00000033970) #7	ADAMTS13 (ENSCPOG00000010285) #8	REXO4 (ENSCPOG00000001386) #9	STKLD1 (ENSCPOG00000021170)	SURF4 (ENSCPOG00000035717) #11	SURF2 (ENSCPOG00000037286) #12	SURF1 (ENSCPOG00000001328) #13	RPL7A (ENSCPOG00000032895)	MED22 (ENSCPOG00000001326) #16	SURF6 (ENSCPOG00000030454) #17	DIPK1B (ENSCPOG00000025816) #19	AGPAT2 (ENSCPOG00000019769) #20	ENSCPOG00000033928 #21	NOTCH1 (ENSCPOG00000012958) #22	SEC16A (ENSCPOG00000013586) #23	INPP5E (ENSCPOG00000009596) #24	PMPCA (ENSCPOG00000007258) #25	ENTR1 (ENSCPOG00000007252) #26	SNAPC4 (ENSCPOG00000006211) #27	CARD9 (ENSCPOG00000015152) #28	DNLZ (ENSCPOG00000022063) #29	GPSM1 (ENSCPOG00000027604) #30	ENSCPOG00000035077	QSOX2 (ENSCPOG00000012489) #33	LHX3 (ENSCPOG00000007109) #34	TMEM250 (ENSCPOG00000032194) #35	NACC2 (ENSCPOG00000040403) #36	UBAC1 (ENSCPOG00000007953) #37	CAMSAP1 (ENSCPOG00000022674)
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000156621	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000153116.C.a	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Marmotini	ANCESTRAL SPECIES	1	ENSGT00940000156621	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000153116.C.a	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560.m.a.a #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734.e.a #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Marmotini_b	ANCESTRAL SPECIES	2	ENSGT00940000156621	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000153116.C.a	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560.m.a.a #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734.e.a #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Arctic ground squirrel	MODERN SPECIES	156	TRAF2 (ENSUPAG00010006407)	EDF1 (ENSUPAG00010006437)	MAMDC4 (ENSUPAG00010006442)	PHPT1 (ENSUPAG00010006497)	AJM1 (ENSUPAG00010006500)	RABL6 (ENSUPAG00010006504)	ENSUPAG00010006516	TMEM141 (ENSUPAG00010006528)	LCN15 (ENSUPAG00010006536) ##18	LCN8 (ENSUPAG00010006538) ##18	LCN6 (ENSUPAG00010006550) ##18	LCN10 (ENSUPAG00010006573) ##18	DIPK1B (ENSUPAG00010006606) #19	AGPAT2 (ENSUPAG00010006616) #20	ENSUPAG00010006626 #21	NOTCH1 (ENSUPAG00010006771) #22	SEC16A (ENSUPAG00010006882) #23	INPP5E (ENSUPAG00010006961) #24	PMPCA (ENSUPAG00010006984) #25	ENSUPAG00010007001 #26	SNAPC4 (ENSUPAG00010007009) #27	CARD9 (ENSUPAG00010007067) #28	DNLZ (ENSUPAG00010007099) #29	GPSM1 (ENSUPAG00010007108) #30	ENSUPAG00010007204	QSOX2 (ENSUPAG00010007235) #33	LHX3 (ENSUPAG00010007248) #34	TMEM250 (ENSUPAG00010007293) #35	NACC2 (ENSUPAG00010007297) #36	UBAC1 (ENSUPAG00010007327) #37	CAMSAP1 (ENSUPAG00010007377)
Squirrel	MODERN SPECIES	269	TRAF2 (ENSSTOG00000012096)	EDF1 (ENSSTOG00000025154)	MAMDC4 (ENSSTOG00000015455)	PHPT1 (ENSSTOG00000019599)	AJM1 (ENSSTOG00000026589)	RABL6 (ENSSTOG00000021251)	ENSSTOG00000022489	TMEM141 (ENSSTOG00000029115)	LCN15 (ENSSTOG00000024610) ##18	LCN8 (ENSSTOG00000009404) ##18	LCN6 (ENSSTOG00000021330) ##18	LCN10 (ENSSTOG00000028192) ##18	DIPK1B (ENSSTOG00000009097) #19	AGPAT2 (ENSSTOG00000023422) #20	ENSSTOG00000021911 #21	NOTCH1 (ENSSTOG00000005889) #22	SEC16A (ENSSTOG00000014119) #23	ENSSTOG00000014111 #24	PMPCA (ENSSTOG00000014103) #25	ENSSTOG00000014097 #26	SNAPC4 (ENSSTOG00000014067) #27	CARD9 (ENSSTOG00000014062) #28	DNLZ (ENSSTOG00000026290) #29	GPSM1 (ENSSTOG00000028230) #30	ENSSTOG00000021118	QSOX2 (ENSSTOG00000005021) #33	LHX3 (ENSSTOG00000005001) #34	TMEM250 (ENSSTOG00000026801) #35	NACC2 (ENSSTOG00000022606) #36	UBAC1 (ENSSTOG00000015109) #37	CAMSAP1 (ENSSTOG00000015097)
Alpin marmot	MODERN SPECIES	106	FBXW5 (ENSMMMG00000009406)	TRAF2 (ENSMMMG00000009429)	EDF1 (ENSMMMG00000009463)	PHPT1 (ENSMMMG00000009614)	RABL6 (ENSMMMG00000009622)	ENSMMMG00000009637	ENSMMMG00000009663	LCN15 (ENSMMMG00000009670) ##18	LCN8 (ENSMMMG00000009685) ##18	LCN6 (ENSMMMG00000009705) ##18	LCN10 (ENSMMMG00000009747) ##18	DIPK1B (ENSMMMG00000009805) #19	AGPAT2 (ENSMMMG00000009810) #20	EGFL7 (ENSMMMG00000009814) #21	ENSMMMG00000009932	NOTCH1 (ENSMMMG00000009940) #22	SEC16A (ENSMMMG00000010470) #23	INPP5E (ENSMMMG00000010568) #24	PMPCA (ENSMMMG00000010621) #25	ENSMMMG00000010814 #26	SNAPC4 (ENSMMMG00000010852) #27	CARD9 (ENSMMMG00000010888) #28	DNLZ (ENSMMMG00000010896) #29	GPSM1 (ENSMMMG00000010910) #30	ENSMMMG00000010974	ENSMMMG00000011069 #33	ENSMMMG00000011076 #33	LHX3 (ENSMMMG00000011096) #34	TMEM250 (ENSMMMG00000011135) #35	NACC2 (ENSMMMG00000011141) #36	UBAC1 (ENSMMMG00000011160) #37
Eurasian red squirrel	MODERN SPECIES	6	FBXW5 (ENSSVLG00005017960)	TRAF2 (ENSSVLG00005017919)	ENSSVLG00005017849	PHPT1 (ENSSVLG00005016779)	AJM1 (ENSSVLG00005016763)	RABL6 (ENSSVLG00005016617)	ENSSVLG00005016575	TMEM141 (ENSSVLG00005025675)	LCN15 (ENSSVLG00005025667) ##18	LCN8 (ENSSVLG00005025658) ##18	LCN6 (ENSSVLG00005025649) ##18	LCN10 (ENSSVLG00005025638) ##18	DIPK1B (ENSSVLG00005025614) #19	AGPAT2 (ENSSVLG00005025601) #20	EGFL7 (ENSSVLG00005025586) #21	NOTCH1 (ENSSVLG00005025572) #22	SEC16A (ENSSVLG00005025541) #23	INPP5E (ENSSVLG00005025510) #24	PMPCA (ENSSVLG00005025480) #25	ENSSVLG00005025436 #26	SNAPC4 (ENSSVLG00005025357) #27	CARD9 (ENSSVLG00005025311) #28	DNLZ (ENSSVLG00005025294) #29	GPSM1 (ENSSVLG00005025269) #30	ENSSVLG00005025200	QSOX2 (ENSSVLG00005025160) #33	LHX3 (ENSSVLG00005025119) #34	TMEM250 (ENSSVLG00005025103) #35	NACC2 (ENSSVLG00005025091) #36	UBAC1 (ENSSVLG00005025073) #37	CAMSAP1 (ENSSVLG00005025049)
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000159976	ENSGT00390000000529 #7	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.a.c.b	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00390000000529 #7	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.a.c.b	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00940000153294.m.a.c.b	ENSGT00530000064194 #13	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00940000153294.m.a.c.b	ENSGT00530000064194 #13	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Cricetidae	ANCESTRAL SPECIES	12	ENSGT00390000000529 #7	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.a.c.b	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.b #18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00390000000529 #7	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00940000153294.m.a.c.b	ENSGT00530000064194 #13	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.b #18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Chinese hamster chok1gshd	MODERN SPECIES	188	Adamts13 (ENSCGRG00001019728) #8	Rexo4 (ENSCGRG00001013126) #9	Stkld1 (ENSCGRG00001004554)	Surf4 (ENSCGRG00001023854) #11	Surf2 (ENSCGRG00001023343) #12	ENSCGRG00001015263	Surf1 (ENSCGRG00001014570) #13	Med22 (ENSCGRG00001020945) #16	ENSCGRG00001020486	ENSCGRG00001001267	ENSCGRG00001024691	ENSCGRG00001018384 #18	Dipk1b (ENSCGRG00001015260) #19	Agpat2 (ENSCGRG00001014817) #20	Egfl7 (ENSCGRG00001003716) #21	Notch1 (ENSCGRG00001014866) #22	Sec16a (ENSCGRG00001023785) #23	Inpp5e (ENSCGRG00001022064) #24	Pmpca (ENSCGRG00001007411) #25	Entr1 (ENSCGRG00001016737) #26	Snapc4 (ENSCGRG00001015109) #27	Card9 (ENSCGRG00001012284) #28	Dnlz (ENSCGRG00001019566) #29	Gpsm1 (ENSCGRG00001012682) #30	ENSCGRG00001022133	Qsox2 (ENSCGRG00001019767) #33	Lhx3 (ENSCGRG00001019384) #34	Tmem250-ps (ENSCGRG00001007569) #35	Nacc2 (ENSCGRG00001012321) #36	Ubac1 (ENSCGRG00001020637) #37	Camsap1 (ENSCGRG00001013972)
Golden Hamster	MODERN SPECIES	771												Lcn4 (ENSMAUG00000008000) ##18	Dipk1b (ENSMAUG00000008552) #19	Agpat2 (ENSMAUG00000014597) #20	Egfl7 (ENSMAUG00000018987) #21	Notch1 (ENSMAUG00000011824) #22	Sec16a (ENSMAUG00000017966) #23	Inpp5e (ENSMAUG00000017678) #24	Pmpca (ENSMAUG00000013143) #25	Entr1 (ENSMAUG00000016839) #26	Snapc4 (ENSMAUG00000011728) #27	Card9 (ENSMAUG00000020442) #28	Dnlz (ENSMAUG00000019601) #29	Gpsm1 (ENSMAUG00000017225) #30	ENSMAUG00000014516	Qsox2 (ENSMAUG00000002434) #33	Lhx3 (ENSMAUG00000016447) #34	Tmem250-ps (ENSMAUG00000016832) #35	Nacc2 (ENSMAUG00000019689) #36	Ubac1 (ENSMAUG00000009990) #37	ENSMAUG00000006623
Cricetidae_B	ANCESTRAL SPECIES	7	ENSGT00390000000529 #7	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.a.c.b	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.b #18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Northern American deer mouse	MODERN SPECIES	17	Surf6 (ENSPEMG00000012589) #17	ENSPEMG00000030374	ENSPEMG00000028458	ENSPEMG00000028228	ENSPEMG00000028865	ENSPEMG00000026996 ##18	ENSPEMG00000010108 ##18	ENSPEMG00000016706	ENSPEMG00000005980	ENSPEMG00000015734	ENSPEMG00000010276	ENSPEMG00000025898 #18	Dipk1b (ENSPEMG00000017048) #19	Agpat2 (ENSPEMG00000014610) #20	Egfl7 (ENSPEMG00000013587) #21	Notch1 (ENSPEMG00000013515) #22	Sec16a (ENSPEMG00000002372) #23	Inpp5e (ENSPEMG00000017488) #24	Pmpca (ENSPEMG00000016831) #25	Entr1 (ENSPEMG00000014447) #26	Snapc4 (ENSPEMG00000017310) #27	Card9 (ENSPEMG00000011112) #28	Dnlz (ENSPEMG00000009147) #29	Gpsm1 (ENSPEMG00000013682) #30	Ccdc187 (ENSPEMG00000013602)	Qsox2 (ENSPEMG00000009284) #33	Lhx3 (ENSPEMG00000009629) #34	Tmem250-ps (ENSPEMG00000025479) #35	Nacc2 (ENSPEMG00000011424) #36	Ubac1 (ENSPEMG00000017388) #37	Camsap1 (ENSPEMG00000012617)
Prairie vole	MODERN SPECIES	12	Cacfd1 (ENSMOCG00000018408) #7	Adamts13 (ENSMOCG00000008903) #8	Rexo4 (ENSMOCG00000020607) #9	Stkld1 (ENSMOCG00000000763)	Surf4 (ENSMOCG00000012757) #11	Surf2 (ENSMOCG00000013406) #12	Surf1 (ENSMOCG00000016034) #13	ENSMOCG00000015233	Med22 (ENSMOCG00000016419) #16	Surf6 (ENSMOCG00000011956) #17	ENSMOCG00000015215	ENSMOCG00000015173	Dipk1b (ENSMOCG00000009588) #19	Agpat2 (ENSMOCG00000002719) #20	Egfl7 (ENSMOCG00000017331) #21	Notch1 (ENSMOCG00000001663) #22	Sec16a (ENSMOCG00000013990) #23	Inpp5e (ENSMOCG00000005052) #24	Pmpca (ENSMOCG00000005001) #25	Entr1 (ENSMOCG00000018834) #26	Snapc4 (ENSMOCG00000007604) #27	Card9 (ENSMOCG00000013220) #28	Dnlz (ENSMOCG00000018564) #29	Gpsm1 (ENSMOCG00000016978) #30	ENSMOCG00000015098	Qsox2 (ENSMOCG00000022455) #33	Lhx3 (ENSMOCG00000002906) #34	Tmem250-ps (ENSMOCG00000014787) #35	Nacc2 (ENSMOCG00000016088) #36	ENSMOCG00000017360	Ubac1 (ENSMOCG00000004758) #37
Murinae	ANCESTRAL SPECIES	1	ENSGT00390000000529 #7	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Mus	ANCESTRAL SPECIES	1	ENSGT00390000000529 #7	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Mus_A	ANCESTRAL SPECIES		ENSGT00390000000529 #7	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000000529 #7	ENSGT00940000158379 #8	ENSGT00940000159607.e #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Mus_C	ANCESTRAL SPECIES		ENSGT00390000000529 #7	ENSGT00940000158379 #8	ENSGT00940000159607.e #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Steppe mouse	MODERN SPECIES	2615										ENSMSIG00000028321	ENSMSIG00000028311	Lcn4 (ENSMSIG00000028306) ##18	Dipk1b (ENSMSIG00000028280) #19	ENSMSIG00000028270 #20	ENSMSIG00000028239 #21	Notch1 (ENSMSIG00000028222) #22	Sec16a (ENSMSIG00000028166) #23	Inpp5e (ENSMSIG00000028160) #24	Pmpca (ENSMSIG00000028147) #25	Entr1 (ENSMSIG00000028050) #26	Snapc4 (ENSMSIG00000028025) #27	Card9 (ENSMSIG00000028014) #28	Dnlz (ENSMSIG00000028011) #29	Gpsm1 (ENSMSIG00000027957) #30	Ccdc187 (ENSMSIG00000027882)	Qsox2 (ENSMSIG00000027872) #33	Lhx3 (ENSMSIG00000027861) #34	Tmem250-ps (ENSMSIG00000027859) #35	Nacc2 (ENSMSIG00000027849) #36	ENSMSIG00000027840 #37	ENSMSIG00000027836
spretus	MODERN SPECIES	11	Adamts13 (MGP_SPRETEiJ_G0024250) #8	MGP_SPRETEiJ_G0024249 #9	Stkld1 (MGP_SPRETEiJ_G0024248)	Surf4 (MGP_SPRETEiJ_G0024247) #11	Surf2 (MGP_SPRETEiJ_G0024246) #12	Surf1 (MGP_SPRETEiJ_G0024245) #13	Rpl7a (MGP_SPRETEiJ_G0024244)	Med22 (MGP_SPRETEiJ_G0024243) #16	Surf6 (MGP_SPRETEiJ_G0024242) #17	Abo (MGP_SPRETEiJ_G0024241)	Lcn4 (MGP_SPRETEiJ_G0024240) ##18	Dipk1b (MGP_SPRETEiJ_G0024239) #19	MGP_SPRETEiJ_G0024238	MGP_SPRETEiJ_G0024237	Egfl7 (MGP_SPRETEiJ_G0024236) #21	Notch1 (MGP_SPRETEiJ_G0024235) #22	Sec16a (MGP_SPRETEiJ_G0024234) #23	Inpp5e (MGP_SPRETEiJ_G0024233) #24	Pmpca (MGP_SPRETEiJ_G0024232) #25	Entr1 (MGP_SPRETEiJ_G0024231) #26	Snapc4 (MGP_SPRETEiJ_G0024230) #27	Card9 (MGP_SPRETEiJ_G0024229) #28	Dnlz (MGP_SPRETEiJ_G0024228) #29	Gpsm1 (MGP_SPRETEiJ_G0024227) #30	MGP_SPRETEiJ_G0024226	MGP_SPRETEiJ_G0024225	Qsox2 (MGP_SPRETEiJ_G0024224) #33	Lhx3 (MGP_SPRETEiJ_G0024223) #34	Nacc2 (MGP_SPRETEiJ_G0024222) #36	Ubac1 (MGP_SPRETEiJ_G0024221) #37	Camsap1 (MGP_SPRETEiJ_G0024220)
Mouse	MODERN SPECIES	11	Cacfd1 (ENSMUSG00000015488) #7	Adamts13 (ENSMUSG00000014852) #8	Rexo4 (ENSMUSG00000052406) #9	Stkld1 (ENSMUSG00000049897)	Surf4 (ENSMUSG00000014867) #11	Surf2 (ENSMUSG00000014873) #12	Surf1 (ENSMUSG00000015790) #13	Rpl7a (ENSMUSG00000062647)	Med22 (ENSMUSG00000015776) #16	Surf6 (ENSMUSG00000036160) #17	Abo (ENSMUSG00000015787)	Lcn4 (ENSMUSG00000026919) ##18	Dipk1b (ENSMUSG00000036186) #19	Agpat2 (ENSMUSG00000026922) #20	Egfl7 (ENSMUSG00000026921) #21	Notch1 (ENSMUSG00000026923) #22	Sec16a (ENSMUSG00000026924) #23	Inpp5e (ENSMUSG00000026925) #24	Pmpca (ENSMUSG00000026926) #25	Entr1 (ENSMUSG00000026927) #26	Snapc4 (ENSMUSG00000036281) #27	Card9 (ENSMUSG00000026928) #28	Dnlz (ENSMUSG00000075467) #29	Gpsm1 (ENSMUSG00000026930) #30	Ccdc187 (ENSMUSG00000048038)	Qsox2 (ENSMUSG00000036327) #33	Lhx3 (ENSMUSG00000026934) #34	Tmem250-ps (ENSMUSG00000087679) #35	Nacc2 (ENSMUSG00000026932) #36	Ubac1 (ENSMUSG00000036352) #37	Camsap1 (ENSMUSG00000026933)
Ryukyu mouse	MODERN SPECIES	11	Adamts13 (MGP_CAROLIEiJ_G0023333) #8	MGP_CAROLIEiJ_G0023332 #9	Stkld1 (MGP_CAROLIEiJ_G0023331)	Surf4 (MGP_CAROLIEiJ_G0023330) #11	Surf2 (MGP_CAROLIEiJ_G0023329) #12	Surf1 (MGP_CAROLIEiJ_G0023328) #13	Rpl7a (MGP_CAROLIEiJ_G0023327)	Med22 (MGP_CAROLIEiJ_G0023326) #16	Surf6 (MGP_CAROLIEiJ_G0023325) #17	Abo (MGP_CAROLIEiJ_G0023324)	Lcn4 (MGP_CAROLIEiJ_G0023323) ##18	Dipk1b (MGP_CAROLIEiJ_G0023322) #19	Agpat2 (MGP_CAROLIEiJ_G0023321) #20	MGP_CAROLIEiJ_G0023320	Egfl7 (MGP_CAROLIEiJ_G0023319) #21	Notch1 (MGP_CAROLIEiJ_G0023318) #22	Sec16a (MGP_CAROLIEiJ_G0023317) #23	Inpp5e (MGP_CAROLIEiJ_G0023316) #24	Pmpca (MGP_CAROLIEiJ_G0023315) #25	Entr1 (MGP_CAROLIEiJ_G0023314) #26	Snapc4 (MGP_CAROLIEiJ_G0023313) #27	Card9 (MGP_CAROLIEiJ_G0023312) #28	Dnlz (MGP_CAROLIEiJ_G0023311) #29	Gpsm1 (MGP_CAROLIEiJ_G0023310) #30	MGP_CAROLIEiJ_G0023309	MGP_CAROLIEiJ_G0023308	Qsox2 (MGP_CAROLIEiJ_G0023307) #33	Lhx3 (MGP_CAROLIEiJ_G0023306) #34	Nacc2 (MGP_CAROLIEiJ_G0023305) #36	Ubac1 (MGP_CAROLIEiJ_G0023304) #37	Camsap1 (MGP_CAROLIEiJ_G0023303)
Shrew mouse	MODERN SPECIES	16	Adamts13 (MGP_PahariEiJ_G0024790) #8	Rexo4 (MGP_PahariEiJ_G0024789) #9	Stkld1 (MGP_PahariEiJ_G0024788)	Surf4 (MGP_PahariEiJ_G0024787) #11	Surf2 (MGP_PahariEiJ_G0024786) #12	Surf1 (MGP_PahariEiJ_G0024785) #13	MGP_PahariEiJ_G0024784	Med22 (MGP_PahariEiJ_G0024783) #16	Surf6 (MGP_PahariEiJ_G0024782) #17	Abo (MGP_PahariEiJ_G0024781)	Lcn4 (MGP_PahariEiJ_G0024780) ##18	Dipk1b (MGP_PahariEiJ_G0024779) #19	Agpat2 (MGP_PahariEiJ_G0024778) #20	MGP_PahariEiJ_G0024777	Egfl7 (MGP_PahariEiJ_G0024776) #21	Notch1 (MGP_PahariEiJ_G0024775) #22	Sec16a (MGP_PahariEiJ_G0024774) #23	Inpp5e (MGP_PahariEiJ_G0024773) #24	Pmpca (MGP_PahariEiJ_G0024772) #25	Entr1 (MGP_PahariEiJ_G0024771) #26	Snapc4 (MGP_PahariEiJ_G0024770) #27	Card9 (MGP_PahariEiJ_G0024769) #28	Dnlz (MGP_PahariEiJ_G0024768) #29	Gpsm1 (MGP_PahariEiJ_G0024767) #30	MGP_PahariEiJ_G0024766	MGP_PahariEiJ_G0024765	MGP_PahariEiJ_G0024764 #33	Lhx3 (MGP_PahariEiJ_G0024763) #34	Nacc2 (MGP_PahariEiJ_G0024762) #36	Ubac1 (MGP_PahariEiJ_G0024761) #37	Camsap1 (MGP_PahariEiJ_G0024760)
Rat	MODERN SPECIES	13	LOC681385 (ENSRNOG00000043494) ##18	ENSRNOG00000069598	LOC681385 (ENSRNOG00000030708) ##18	ENSRNOG00000064101	Abo3 (ENSRNOG00000039906)	ENSRNOG00000067433 ##18	Rpl9-ps31 (ENSRNOG00000030476)	Lcn1 (ENSRNOG00000033020) #18	Vegp2 (ENSRNOG00000033761) #18	ENSRNOG00000068352	LOC102552073 (ENSRNOG00000056471)	LOC681186 (ENSRNOG00000069282)	Dipk1b (ENSRNOG00000004532) #19	Agpat2 (ENSRNOG00000019466) #20	Egfl7 (ENSRNOG00000019388) #21	Notch1 (ENSRNOG00000019322) #22	Sec16a (ENSRNOG00000019122) #23	Inpp5e (ENSRNOG00000019039) #24	Pmpca (ENSRNOG00000026775) #25	Entr1 (ENSRNOG00000018876) #26	Snapc4 (ENSRNOG00000018845) #27	Card9 (ENSRNOG00000051470) #28	Dnlz (ENSRNOG00000018791) #29	Gpsm1 (ENSRNOG00000018666) #30	Ccdc187 (ENSRNOG00000027392)	Qsox2 (ENSRNOG00000018574) #33	Lhx3 (ENSRNOG00000018427) #34	Tmem250 (ENSRNOG00000042501) #35	Nacc2 (ENSRNOG00000018231) #36	Ubac1 (ENSRNOG00000017983) #37	Camsap1 (ENSRNOG00000017883)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1179														Agpat2 (ENSNGAG00000013280) #20	Egfl7 (ENSNGAG00000012693) #21	Notch1 (ENSNGAG00000011223) #22	Sec16a (ENSNGAG00000011700) #23	Inpp5e (ENSNGAG00000009453) #24	Pmpca (ENSNGAG00000019335) #25	Entr1 (ENSNGAG00000016610) #26	Snapc4 (ENSNGAG00000015114) #27	Card9 (ENSNGAG00000020047) #28	Dnlz (ENSNGAG00000003205) #29	Gpsm1 (ENSNGAG00000000399) #30	ENSNGAG00000019924	Qsox2 (ENSNGAG00000004702) #33	Lhx3 (ENSNGAG00000015784) #34	Tmem250-ps (ENSNGAG00000014022) #35	Nacc2 (ENSNGAG00000012885) #36	Ubac1 (ENSNGAG00000011289) #37	ENSNGAG00000007949
Lesser Egyptian jerboa	MODERN SPECIES	53	Dbh (ENSJJAG00000022847)	Sardh (ENSJJAG00000017332)	Vav2 (ENSJJAG00000011963)	Brd3 (ENSJJAG00000004342)	Wdr5 (ENSJJAG00000024197)	Rxra (ENSJJAG00000022734)	Col5a1 (ENSJJAG00000021138)	Fcnb (ENSJJAG00000014578)	Olfm1 (ENSJJAG00000023242)	Ppp1r26 (ENSJJAG00000023725)	Pierce1 (ENSJJAG00000024395)	Mrps2 (ENSJJAG00000004108)	ENSJJAG00000016902 #19	Agpat2 (ENSJJAG00000024146) #20	Egfl7 (ENSJJAG00000016779) #21	Notch1 (ENSJJAG00000002417) #22	Sec16a (ENSJJAG00000013749) #23	Inpp5e (ENSJJAG00000021257) #24	Pmpca (ENSJJAG00000014641) #25	Entr1 (ENSJJAG00000017251) #26	Snapc4 (ENSJJAG00000024311) #27	Card9 (ENSJJAG00000021080) #28	Dnlz (ENSJJAG00000015617) #29	Gpsm1 (ENSJJAG00000022361) #30	ENSJJAG00000023017	Qsox2 (ENSJJAG00000016577) #33	ENSJJAG00000019174 #34	Tmem250-ps (ENSJJAG00000011868) #35	Nacc2 (ENSJJAG00000010154) #36	Ubac1 (ENSJJAG00000014746) #37	ENSJJAG00000016785
Kangaroo rat	MODERN SPECIES	437	Sardh (ENSDORG00000015678)	Vav2 (ENSDORG00000011913)	Brd3 (ENSDORG00000012653)	Wdr5 (ENSDORG00000015010)	Rxra (ENSDORG00000009780)	Col5a1 (ENSDORG00000006853)	Fcnb (ENSDORG00000004007)	Olfm1 (ENSDORG00000009691)	Ppp1r26 (ENSDORG00000011441)	Pierce1 (ENSDORG00000025281)	Mrps2 (ENSDORG00000009636)	Abo (ENSDORG00000014859)	Dipk1b (ENSDORG00000029150) #19	Agpat2 (ENSDORG00000001273) #20	ENSDORG00000001272 #21	Notch1 (ENSDORG00000011518) #22	Sec16a (ENSDORG00000015295) #23	Inpp5e (ENSDORG00000004941) #24	Pmpca (ENSDORG00000005777) #25	Entr1 (ENSDORG00000005775) #26	Snapc4 (ENSDORG00000026380) #27	Card9 (ENSDORG00000010502) #28	Gpsm1 (ENSDORG00000010497) #30	Qsox2 (ENSDORG00000029738) #33	Lhx3 (ENSDORG00000025865) #34	Tmem250-ps (ENSDORG00000028407) #35	Nacc2 (ENSDORG00000024416) #36	Ubac1 (ENSDORG00000005016) #37	Camsap1 (ENSDORG00000016086)	ENSDORG00000023336	Glt6d1 (ENSDORG00000007879)
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000157157.b #22
Pika	MODERN SPECIES	2079																ENSOPRG00000011529 #22
Primates	ANCESTRAL SPECIES	9	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00910000147521	ENSGT00940000159211.C	ENSGT00940000164320	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00910000147521	ENSGT00940000159211.C	ENSGT00940000164320	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00940000156621	ENSGT00390000008519.x	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00910000146998	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000068668	ENSGT00530000065015	ENSGT00770000121771	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00910000147142
Hominoidea	ANCESTRAL SPECIES	19	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00910000146998	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724.a #25	ENSGT00390000000560.t #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000068668	ENSGT00530000065015	ENSGT00770000121771	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00980000202250	ENSGT00560000078707 #35
Hominidae	ANCESTRAL SPECIES	10	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00910000146998	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724.a #25	ENSGT00390000000560.t #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000068668	ENSGT00530000065015	ENSGT00770000121771	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00980000202250	ENSGT00560000078707 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00910000146998	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724.a #25	ENSGT00390000000560.t #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000068668	ENSGT00530000065015.c	ENSGT00770000121771	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00980000202250	ENSGT00560000078707 #35
Homo/Pan group	ANCESTRAL SPECIES	16	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00910000146998	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724.a #25	ENSGT00390000000560.t #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000068668	ENSGT00530000065015.c	ENSGT00770000121771	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00980000202250	ENSGT00560000078707 #35
Pan	ANCESTRAL SPECIES	18	ENSGT00940000156621	ENSGT00390000008519.x	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00910000146998	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724.a #25	ENSGT00390000000560.t #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000068668	ENSGT00530000065015.c	ENSGT00770000121771	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00980000202250	ENSGT00560000078707 #35
Bonobo	MODERN SPECIES	22	FBXW5 (ENSPPAG00000030876)	TRAF2 (ENSPPAG00000002032)	EDF1 (ENSPPAG00000028843)	MAMDC4 (ENSPPAG00000037333)	ENSPPAG00000042861	RABL6 (ENSPPAG00000042288)	CCDC183 (ENSPPAG00000034695)	ENSPPAG00000035174	ENSPPAG00000031648	LCN15 (ENSPPAG00000028560) ##18	ENSPPAG00000036649 ##18	DIPK1B (ENSPPAG00000034515) #19	AGPAT2 (ENSPPAG00000039632) #20	EGFL7 (ENSPPAG00000038586) #21	ENSPPAG00000037854	NOTCH1 (ENSPPAG00000039565) #22	SEC16A (ENSPPAG00000041065) #23	INPP5E (ENSPPAG00000040054) #24	PMPCA (ENSPPAG00000037773) #25	ENTR1 (ENSPPAG00000027715) #26	SNAPC4 (ENSPPAG00000036391) #27	CARD9 (ENSPPAG00000038103) #28	ENSPPAG00000035373 #29	GPSM1 (ENSPPAG00000041759) #30	ENSPPAG00000023573	CCDC187 (ENSPPAG00000012976)	ENSPPAG00000024982	QSOX2 (ENSPPAG00000037446) #33	LHX3 (ENSPPAG00000031746) #34	TMEM250 (ENSPPAG00000027749) #35	ENSPPAG00000024872
Chimpanzee	MODERN SPECIES	22	TRAF2 (ENSPTRG00000021578)	EDF1 (ENSPTRG00000021577)	MAMDC4 (ENSPTRG00000021576)	PHPT1 (ENSPTRG00000028987)	AJM1 (ENSPTRG00000047869)	RABL6 (ENSPTRG00000034484)	CCDC183 (ENSPTRG00000021573)	TMEM141 (ENSPTRG00000040757)	ENSPTRG00000046756	LCN15 (ENSPTRG00000021569) ##18	LCN8 (ENSPTRG00000021568) ##18	DIPK1B (ENSPTRG00000021565) #19	AGPAT2 (ENSPTRG00000021564) #20	EGFL7 (ENSPTRG00000021563) #21	ENSPTRG00000042787	NOTCH1 (ENSPTRG00000021561) #22	SEC16A (ENSPTRG00000050333) #23	INPP5E (ENSPTRG00000021557) #24	PMPCA (ENSPTRG00000021556) #25	ENTR1 (ENSPTRG00000021555) #26	SNAPC4 (ENSPTRG00000021554) #27	CARD9 (ENSPTRG00000021551) #28	DNLZ (ENSPTRG00000034113) #29	GPSM1 (ENSPTRG00000021549) #30	ENSPTRG00000042394	CCDC187 (ENSPTRG00000041847)	ENSPTRG00000043043	QSOX2 (ENSPTRG00000021547) #33	LHX3 (ENSPTRG00000021546) #34	ENSPTRG00000052548	TMEM250 (ENSPTRG00000045356) #35
Human	MODERN SPECIES	21	TRAF2 (ENSG00000127191)	EDF1 (ENSG00000107223)	MAMDC4 (ENSG00000177943)	PHPT1 (ENSG00000054148)	AJM1 (ENSG00000232434)	RABL6 (ENSG00000196642)	CCDC183 (ENSG00000213213)	TMEM141 (ENSG00000244187)	LCN15 (ENSG00000177984) ##18	LCN8 (ENSG00000204001) ##18	LCN6 (ENSG00000267206) ##18	LCN10 (ENSG00000187922) ##18	DIPK1B (ENSG00000165716) #19	AGPAT2 (ENSG00000169692) #20	EGFL7 (ENSG00000172889) #21	NOTCH1 (ENSG00000148400) #22	SEC16A (ENSG00000148396) #23	INPP5E (ENSG00000148384) #24	PMPCA (ENSG00000165688) #25	ENTR1 (ENSG00000165689) #26	SNAPC4 (ENSG00000165684) #27	CARD9 (ENSG00000187796) #28	DNLZ (ENSG00000213221) #29	GPSM1 (ENSG00000160360) #30	CCDC187 (ENSG00000260220)	QSOX2 (ENSG00000165661) #33	LHX3 (ENSG00000107187) #34	TMEM250 (ENSG00000238227) #35	NACC2 (ENSG00000148411) #36	UBAC1 (ENSG00000130560) #37	CAMSAP1 (ENSG00000130559)
Gorilla	MODERN SPECIES	22	TRAF2 (ENSGGOG00000007150)	EDF1 (ENSGGOG00000014750)	MAMDC4 (ENSGGOG00000034827)	PHPT1 (ENSGGOG00000014734)	AJM1 (ENSGGOG00000023762)	RABL6 (ENSGGOG00000014721)	CCDC183 (ENSGGOG00000014712)	ENSGGOG00000014707	LCN15 (ENSGGOG00000015034) ##18	ENSGGOG00000037615 ##18	ENSGGOG00000000037 ##18	DIPK1B (ENSGGOG00000016071) #19	AGPAT2 (ENSGGOG00000016829) #20	EGFL7 (ENSGGOG00000016820) #21	ENSGGOG00000041839	ENSGGOG00000009937 #22	SEC16A (ENSGGOG00000010933) #23	INPP5E (ENSGGOG00000010924) #24	PMPCA (ENSGGOG00000010912) #25	ENTR1 (ENSGGOG00000010905) #26	SNAPC4 (ENSGGOG00000010887) #27	CARD9 (ENSGGOG00000010874) #28	ENSGGOG00000010871 #29	GPSM1 (ENSGGOG00000010856) #30	ENSGGOG00000023915	ENSGGOG00000037242	ENSGGOG00000024330	QSOX2 (ENSGGOG00000014107) #33	LHX3 (ENSGGOG00000014099) #34	ENSGGOG00000043190	ENSGGOG00000038791
Orangutan	MODERN SPECIES	22	C8G (ENSPPYG00000019792)	TRAF2 (ENSPPYG00000019790)	ENSPPYG00000019789	PHPT1 (ENSPPYG00000019787)	AJM1 (ENSPPYG00000032469)	ENSPPYG00000019786	CCDC183 (ENSPPYG00000040256)	ENSPPYG00000039306	ENSPPYG00000038232 ##18	LCN8 (ENSPPYG00000019785) ##18	LCN6 (ENSPPYG00000019783) ##18	LCN10 (ENSPPYG00000019782) ##18	DIPK1B (ENSPPYG00000034533) #19	AGPAT2 (ENSPPYG00000019780) #20	EGFL7 (ENSPPYG00000019779) #21	NOTCH1 (ENSPPYG00000019777) #22	SEC16A (ENSPPYG00000019775) #23	INPP5E (ENSPPYG00000019774) #24	PMPCA (ENSPPYG00000019773) #25	ENTR1 (ENSPPYG00000019772) #26	ENSPPYG00000038823	SNAPC4 (ENSPPYG00000019771) #27	CARD9 (ENSPPYG00000019770) #28	DNLZ (ENSPPYG00000019769) #29	GPSM1 (ENSPPYG00000019768) #30	CCDC187 (ENSPPYG00000038770)	QSOX2 (ENSPPYG00000019766) #33	LHX3 (ENSPPYG00000019765) #34	ENSPPYG00000019764 #37	CAMSAP1 (ENSPPYG00000019763)	KCNT1 (ENSPPYG00000029787)
Gibbon	MODERN SPECIES	23	TRAF2 (ENSNLEG00000008615)	EDF1 (ENSNLEG00000008605)	MAMDC4 (ENSNLEG00000008540)	ENSNLEG00000008535	RABL6 (ENSNLEG00000008449)	CCDC183 (ENSNLEG00000008417)	ENSNLEG00000008412	ENSNLEG00000008407 ##18	ENSNLEG00000008388 ##18	LCN6 (ENSNLEG00000008384) ##18	LCN10 (ENSNLEG00000008369) ##18	ENSNLEG00000008367 #19	AGPAT2 (ENSNLEG00000008362) #20	EGFL7 (ENSNLEG00000008358) #21	ENSNLEG00000030857	NOTCH1 (ENSNLEG00000008342) #22	SEC16A (ENSNLEG00000008283) #23	ENSNLEG00000008277 #24	PMPCA (ENSNLEG00000008214) #25	ENSNLEG00000031363	ENTR1 (ENSNLEG00000008186) #26	SNAPC4 (ENSNLEG00000008175) #27	CARD9 (ENSNLEG00000008156) #28	ENSNLEG00000008154	GPSM1 (ENSNLEG00000008142) #30	ENSNLEG00000008140	ENSNLEG00000008949	ENSNLEG00000008946 #33	ENSNLEG00000008943 #34	ENSNLEG00000034273	TMEM250 (ENSNLEG00000033278) #35
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00940000162046	ENSGT00390000002738.a.i.b	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00910000146998	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000068668	ENSGT00530000065015	ENSGT00770000121771	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00910000147142
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00940000162046	ENSGT00390000002738.a.i.b	ENSGT00390000002738.a.j	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00910000146998	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000068668	ENSGT00530000065015	ENSGT00770000121771	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00910000147142
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000162046	ENSGT00390000002738.a.i.b	ENSGT00390000002738.a.j	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00910000146998	ENSGT00940000157157.b #22	ENSGT00910000147994	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000068668	ENSGT00530000065015	ENSGT00770000121771	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00390000008519.x	ENSGT00940000162046	ENSGT00390000002738.a.i.b	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00910000146998	ENSGT00940000157157.b #22	ENSGT00910000147994	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000068668	ENSGT00530000065015	ENSGT00940000159734.c.b #33	ENSGT00770000121771	ENSGT00940000159734.d #33	ENSGT00940000159734.c.a #33
Olive baboon	MODERN SPECIES	4	SLC34A3 (ENSPANG00000026343)	TUBB4B (ENSPANG00000016083)	FAM166A (ENSPANG00000026341)	STPG3 (ENSPANG00000026340)	NELFB (ENSPANG00000026339)	TOR4A (ENSPANG00000039581)	ENSPANG00000026338	NOXA1 (ENSPANG00000026337)	ENTPD8 (ENSPANG00000026431)	NSMF (ENSPANG00000026434)	PNPLA7 (ENSPANG00000026436)	ENSPANG00000044405	ENSPANG00000041760	AGPAT2 (ENSPANG00000026127) #20	EGFL7 (ENSPANG00000026128) #21	NOTCH1 (ENSPANG00000026129) #22	ENSPANG00000034369	SEC16A (ENSPANG00000026131) #23	INPP5E (ENSPANG00000026132) #24	PMPCA (ENSPANG00000026133) #25	ENTR1 (ENSPANG00000026134) #26	SNAPC4 (ENSPANG00000026126) #27	CARD9 (ENSPANG00000026125) #28	DNLZ (ENSPANG00000026117) #29	GPSM1 (ENSPANG00000026118) #30	ENSPANG00000026119	ENSPANG00000026121 #33	ENSPANG00000026122 #34	NACC2 (ENSPANG00000026123) #36	UBAC1 (ENSPANG00000026124) #37	CAMSAP1 (ENSPANG00000026116)
Cercopithecinae_d	ANCESTRAL SPECIES	59	ENSGT00940000162046	ENSGT00390000002738.a.i.b	ENSGT00390000002738.a.j	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00910000146998	ENSGT00940000157157.b #22	ENSGT00910000147994	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000068668	ENSGT00530000065015	ENSGT00940000159734.c.a #33	ENSGT00770000121771	ENSGT00940000159734.d #33	ENSGT00940000160316 #34
Drill	MODERN SPECIES	918	FBXW5 (ENSMLEG00000003995)	TRAF2 (ENSMLEG00000042841)	ENSMLEG00000042767	MAMDC4 (ENSMLEG00000030129)	PHPT1 (ENSMLEG00000029203)	RABL6 (ENSMLEG00000040336)	CCDC183 (ENSMLEG00000043113)	TMEM141 (ENSMLEG00000040334)	LCN15 (ENSMLEG00000037585) ##18	LCN8 (ENSMLEG00000043520) ##18	LCN6 (ENSMLEG00000034192) ##18	LCN10 (ENSMLEG00000044396) ##18	DIPK1B (ENSMLEG00000039274) #19	AGPAT2 (ENSMLEG00000043155) #20	EGFL7 (ENSMLEG00000043778) #21	NOTCH1 (ENSMLEG00000034471) #22	ENSMLEG00000026497	SEC16A (ENSMLEG00000033444) #23	INPP5E (ENSMLEG00000025068) #24	PMPCA (ENSMLEG00000004482) #25	ENTR1 (ENSMLEG00000035605) #26	SNAPC4 (ENSMLEG00000044397) #27	CARD9 (ENSMLEG00000028795) #28	ENSMLEG00000042411	GPSM1 (ENSMLEG00000030322) #30	ENSMLEG00000029890	CCDC187 (ENSMLEG00000039793)	ENSMLEG00000039835	QSOX2 (ENSMLEG00000043018) #33	LHX3 (ENSMLEG00000035269) #34	ENSMLEG00000040343
Sooty mangabey	MODERN SPECIES	572	EDF1 (ENSCATG00000040060)	MAMDC4 (ENSCATG00000029861)	PHPT1 (ENSCATG00000029586)	AJM1 (ENSCATG00000020813)	RABL6 (ENSCATG00000033696)	CCDC183 (ENSCATG00000018773)	TMEM141 (ENSCATG00000041045)	LCN15 (ENSCATG00000030121) ##18	LCN8 (ENSCATG00000042952) ##18	LCN6 (ENSCATG00000044431) ##18	LCN10 (ENSCATG00000010025) ##18	DIPK1B (ENSCATG00000039388) #19	AGPAT2 (ENSCATG00000040193) #20	EGFL7 (ENSCATG00000034425) #21	ENSCATG00000029926	NOTCH1 (ENSCATG00000023195) #22	ENSCATG00000022791	SEC16A (ENSCATG00000034091) #23	INPP5E (ENSCATG00000035208) #24	PMPCA (ENSCATG00000013587) #25	ENTR1 (ENSCATG00000042171) #26	SNAPC4 (ENSCATG00000038668) #27	CARD9 (ENSCATG00000045318) #28	DNLZ (ENSCATG00000036691) #29	GPSM1 (ENSCATG00000040442) #30	ENSCATG00000029653	CCDC187 (ENSCATG00000045121)	QSOX2 (ENSCATG00000042911) #33	LHX3 (ENSCATG00000044772) #34	TMEM250 (ENSCATG00000014661) #35	ENSCATG00000045346
Macaca	ANCESTRAL SPECIES	10	ENSGT00390000008519.x	ENSGT00940000162046	ENSGT00390000002738.a.j	ENSGT00390000016543	ENSGT00390000016002.c	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00910000146998	ENSGT00940000157157.b #22	ENSGT00910000147994	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000068668	ENSGT00530000065015	ENSGT00770000121771	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35
Macaca_a	ANCESTRAL SPECIES	10	ENSGT00940000162046	ENSGT00390000002738.a.i.a	ENSGT00390000002738.a.j	ENSGT00390000016543	ENSGT00390000016002.c	ENSGT00940000163544	ENSGT00520000060469	ENSGT00940000166898.a.a.b.b.a.a.b.b.a.a	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00910000147994	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37
Rhesus	MODERN SPECIES	6	EDF1 (ENSMMUG00000005051)	PHPT1 (ENSMMUG00000005047)	AJM1 (ENSMMUG00000005046)	RABL6 (ENSMMUG00000005042)	CCDC183 (ENSMMUG00000005040)	ENSMMUG00000048231	ENSMMUG00000057327	LCN15 (ENSMMUG00000004815) ##18	LCN8 (ENSMMUG00000001834) ##18	LCN6 (ENSMMUG00000018754) ##18	LCN10 (ENSMMUG00000018753) ##18	DIPK1B (ENSMMUG00000049689) #19	AGPAT2 (ENSMMUG00000020990) #20	EGFL7 (ENSMMUG00000026981) #21	ENSMMUG00000056009	NOTCH1 (ENSMMUG00000017022) #22	ENSMMUG00000041459	SEC16A (ENSMMUG00000003106) #23	INPP5E (ENSMMUG00000003105) #24	PMPCA (ENSMMUG00000003098) #25	ENTR1 (ENSMMUG00000003089) #26	SNAPC4 (ENSMMUG00000003086) #27	CARD9 (ENSMMUG00000003084) #28	DNLZ (ENSMMUG00000003083) #29	GPSM1 (ENSMMUG00000003081) #30	CCDC187 (ENSMMUG00000001409)	QSOX2 (ENSMMUG00000004885) #33	LHX3 (ENSMMUG00000004882) #34	TMEM250 (ENSMMUG00000041988) #35	NACC2 (ENSMMUG00000000276) #36	UBAC1 (ENSMMUG00000016827) #37
Crab-eating macaque	MODERN SPECIES	6	PHPT1 (ENSMFAG00000000240)	ENSMFAG00000043136	ENSMFAG00000056778	ENSMFAG00000065092	CCDC183 (ENSMFAG00000007280)	TMEM141 (ENSMFAG00000030006)	ENSMFAG00000053599	LCN15 (ENSMFAG00000031073) ##18	LCN8 (ENSMFAG00000039801) ##18	ENSMFAG00000062656	ENSMFAG00000059899	LCN10 (ENSMFAG00000000089) ##18	DIPK1B (ENSMFAG00000045811) #19	AGPAT2 (ENSMFAG00000034214) #20	EGFL7 (ENSMFAG00000043021) #21	NOTCH1 (ENSMFAG00000000688) #22	SEC16A (ENSMFAG00000031567) #23	INPP5E (ENSMFAG00000002592) #24	PMPCA (ENSMFAG00000001884) #25	ENTR1 (ENSMFAG00000040249) #26	SNAPC4 (ENSMFAG00000003913) #27	CARD9 (ENSMFAG00000040508) #28	DNLZ (ENSMFAG00000045519) #29	GPSM1 (ENSMFAG00000040736) #30	CCDC187 (ENSMFAG00000043161)	QSOX2 (ENSMFAG00000000173) #33	LHX3 (ENSMFAG00000042900) #34	NACC2 (ENSMFAG00000052501) #36	CAMSAP1 (ENSMFAG00000001245)	ENSMFAG00000043740	ENSMFAG00000048033
Pig-tailed macaque	MODERN SPECIES	490	EDF1 (ENSMNEG00000036130)	MAMDC4 (ENSMNEG00000033930)	PHPT1 (ENSMNEG00000031171)	AJM1 (ENSMNEG00000024181)	RABL6 (ENSMNEG00000037443)	CCDC183 (ENSMNEG00000036029)	TMEM141 (ENSMNEG00000042354)	LCN15 (ENSMNEG00000033282) ##18	LCN8 (ENSMNEG00000031815) ##18	LCN6 (ENSMNEG00000045223) ##18	LCN10 (ENSMNEG00000040647) ##18	DIPK1B (ENSMNEG00000045182) #19	AGPAT2 (ENSMNEG00000028259) #20	EGFL7 (ENSMNEG00000029858) #21	ENSMNEG00000038585	NOTCH1 (ENSMNEG00000030577) #22	ENSMNEG00000024709	SEC16A (ENSMNEG00000045097) #23	INPP5E (ENSMNEG00000031118) #24	PMPCA (ENSMNEG00000036908) #25	ENSMNEG00000033991 #26	SNAPC4 (ENSMNEG00000044910) #27	CARD9 (ENSMNEG00000030791) #28	DNLZ (ENSMNEG00000030241) #29	GPSM1 (ENSMNEG00000041757) #30	ENSMNEG00000034539	CCDC187 (ENSMNEG00000036363)	ENSMNEG00000037428	QSOX2 (ENSMNEG00000044842) #33	LHX3 (ENSMNEG00000039375) #34	TMEM250 (ENSMNEG00000008993) #35
Vervet Monkey	MODERN SPECIES	3	TRAF2 (ENSCSAG00000016084)	EDF1 (ENSCSAG00000016077)	MAMDC4 (ENSCSAG00000016066)	PHPT1 (ENSCSAG00000016037)	AJM1 (ENSCSAG00000019684)	RABL6 (ENSCSAG00000015993)	ENSCSAG00000015946	TMEM141 (ENSCSAG00000015926)	LCN15 (ENSCSAG00000015917) ##18	LCN8 (ENSCSAG00000015909) ##18	LCN6 (ENSCSAG00000015897) ##18	LCN10 (ENSCSAG00000015892) ##18	DIPK1B (ENSCSAG00000015886) #19	AGPAT2 (ENSCSAG00000015884) #20	ENSCSAG00000015882 #21	NOTCH1 (ENSCSAG00000015874) #22	SEC16A (ENSCSAG00000015852) #23	INPP5E (ENSCSAG00000015816) #24	PMPCA (ENSCSAG00000015811) #25	ENTR1 (ENSCSAG00000015805) #26	SNAPC4 (ENSCSAG00000015779) #27	CARD9 (ENSCSAG00000015768) #28	DNLZ (ENSCSAG00000015762) #29	GPSM1 (ENSCSAG00000015757) #30	ENSCSAG00000015751 #32	QSOX2 (ENSCSAG00000015745) #33	LHX3 (ENSCSAG00000015739) #34	TMEM250 (ENSCSAG00000019685) #35	NACC2 (ENSCSAG00000015727) #36	UBAC1 (ENSCSAG00000015725) #37	CAMSAP1 (ENSCSAG00000015719)
Rhinopithecus	ANCESTRAL SPECIES	2	ENSGT00940000162046	ENSGT00390000002738.a.i.b	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00910000146998	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00910000147510	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00770000121771	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36
Golden snub-nosed monkey	MODERN SPECIES	1695	TRAF2 (ENSRROG00000033044)	EDF1 (ENSRROG00000036689)	MAMDC4 (ENSRROG00000028994)	ENSRROG00000011056	RABL6 (ENSRROG00000043877)	CCDC183 (ENSRROG00000016750)	TMEM141 (ENSRROG00000035499)	LCN15 (ENSRROG00000034391) ##18	LCN8 (ENSRROG00000020669) ##18	LCN6 (ENSRROG00000032208) ##18	LCN10 (ENSRROG00000033133) ##18	DIPK1B (ENSRROG00000030531) #19	AGPAT2 (ENSRROG00000037674) #20	EGFL7 (ENSRROG00000042806) #21	ENSRROG00000034873	NOTCH1 (ENSRROG00000043680) #22	SEC16A (ENSRROG00000043913) #23	INPP5E (ENSRROG00000034624) #24	PMPCA (ENSRROG00000038079) #25	ENTR1 (ENSRROG00000042367) #26	SNAPC4 (ENSRROG00000037831) #27	CARD9 (ENSRROG00000037500) #28	DNLZ (ENSRROG00000030185) #29	GPSM1 (ENSRROG00000029765) #30	ENSRROG00000022335	CCDC187 (ENSRROG00000030970)	ENSRROG00000039951	QSOX2 (ENSRROG00000000133) #33	LHX3 (ENSRROG00000040705) #34	TMEM250 (ENSRROG00000014064) #35	NACC2 (ENSRROG00000041819) #36
Black snub-nosed monkey	MODERN SPECIES	1117	MAMDC4 (ENSRBIG00000038570)	ENSRBIG00000031349	AJM1 (ENSRBIG00000034110)	RABL6 (ENSRBIG00000035338)	CCDC183 (ENSRBIG00000037153)	TMEM141 (ENSRBIG00000037126)	ENSRBIG00000043462	LCN15 (ENSRBIG00000030731) ##18	LCN8 (ENSRBIG00000041569) ##18	LCN6 (ENSRBIG00000029873) ##18	LCN10 (ENSRBIG00000035808) ##18	DIPK1B (ENSRBIG00000042481) #19	AGPAT2 (ENSRBIG00000033419) #20	EGFL7 (ENSRBIG00000032261) #21	ENSRBIG00000013588	NOTCH1 (ENSRBIG00000035080) #22	SEC16A (ENSRBIG00000032839) #23	INPP5E (ENSRBIG00000028441) #24	PMPCA (ENSRBIG00000031926) #25	ENTR1 (ENSRBIG00000039999) #26	SNAPC4 (ENSRBIG00000017249) #27	CARD9 (ENSRBIG00000028861) #28	DNLZ (ENSRBIG00000035500) #29	GPSM1 (ENSRBIG00000025573) #30	ENSRBIG00000038310	CCDC187 (ENSRBIG00000034057)	ENSRBIG00000043062	QSOX2 (ENSRBIG00000033847) #33	LHX3 (ENSRBIG00000041290) #34	TMEM250 (ENSRBIG00000029884) #35	NACC2 (ENSRBIG00000035502) #36
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00940000156621	ENSGT00390000008519.x	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000153116.C.a	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Cebidae	ANCESTRAL SPECIES	7	ENSGT00940000156621	ENSGT00390000008519.x	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Cebidae_a	ANCESTRAL SPECIES	50	ENSGT00940000156621	ENSGT00390000008519.x	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Capuchin	MODERN SPECIES	339	TRAF2 (ENSCCAG00000027650)	EDF1 (ENSCCAG00000020655)	MAMDC4 (ENSCCAG00000022947)	PHPT1 (ENSCCAG00000021496)	AJM1 (ENSCCAG00000032493)	RABL6 (ENSCCAG00000000520)	CCDC183 (ENSCCAG00000018823)	TMEM141 (ENSCCAG00000024758)	LCN15 (ENSCCAG00000018305) ##18	LCN8 (ENSCCAG00000030933) ##18	LCN6 (ENSCCAG00000027811) ##18	LCN10 (ENSCCAG00000011020) ##18	DIPK1B (ENSCCAG00000034391) #19	AGPAT2 (ENSCCAG00000028504) #20	EGFL7 (ENSCCAG00000023392) #21	NOTCH1 (ENSCCAG00000034699) #22	SEC16A (ENSCCAG00000032922) #23	INPP5E (ENSCCAG00000017723) #24	PMPCA (ENSCCAG00000024313) #25	ENTR1 (ENSCCAG00000011969) #26	SNAPC4 (ENSCCAG00000027922) #27	CARD9 (ENSCCAG00000035142) #28	DNLZ (ENSCCAG00000034397) #29	GPSM1 (ENSCCAG00000023809) #30	CCDC187 (ENSCCAG00000035700)	QSOX2 (ENSCCAG00000026034) #33	LHX3 (ENSCCAG00000018930) #34	TMEM250 (ENSCCAG00000007194) #35	NACC2 (ENSCCAG00000033832) #36	UBAC1 (ENSCCAG00000036044) #37	CAMSAP1 (ENSCCAG00000029904)
Bolivian squirrel monkey	MODERN SPECIES	186	FBXW5 (ENSSBOG00000033854)	TRAF2 (ENSSBOG00000028404)	EDF1 (ENSSBOG00000021626)	MAMDC4 (ENSSBOG00000035516)	PHPT1 (ENSSBOG00000029985)	RABL6 (ENSSBOG00000021920)	ENSSBOG00000034024	ENSSBOG00000029916	LCN15 (ENSSBOG00000030726) ##18	LCN8 (ENSSBOG00000022923) ##18	LCN6 (ENSSBOG00000022941) ##18	LCN10 (ENSSBOG00000033074) ##18	DIPK1B (ENSSBOG00000031677) #19	AGPAT2 (ENSSBOG00000026387) #20	EGFL7 (ENSSBOG00000001778) #21	NOTCH1 (ENSSBOG00000024675) #22	SEC16A (ENSSBOG00000026345) #23	INPP5E (ENSSBOG00000029471) #24	PMPCA (ENSSBOG00000029246) #25	ENTR1 (ENSSBOG00000023035) #26	SNAPC4 (ENSSBOG00000032957) #27	CARD9 (ENSSBOG00000019653) #28	DNLZ (ENSSBOG00000009038) #29	GPSM1 (ENSSBOG00000033524) #30	CCDC187 (ENSSBOG00000029275)	QSOX2 (ENSSBOG00000034895) #33	LHX3 (ENSSBOG00000030258) #34	TMEM250 (ENSSBOG00000009150) #35	NACC2 (ENSSBOG00000018782) #36	UBAC1 (ENSSBOG00000024476) #37	CAMSAP1 (ENSSBOG00000035271)
Marmoset	MODERN SPECIES		ENSCJAG00000011166	MAMDC4 (ENSCJAG00000011117)	PHPT1 (ENSCJAG00000011097)	TRAF2 (ENSCJAG00000011179)	AJM1 (ENSCJAG00000011094)	ENSCJAG00000011060	ENSCJAG00000011036	TMEM141 (ENSCJAG00000033757)	LCN15 (ENSCJAG00000067340) ##18	LCN8 (ENSCJAG00000011006) ##18	LCN6 (ENSCJAG00000010994) ##18	LCN10 (ENSCJAG00000010980) ##18	DIPK1B (ENSCJAG00000045050) #19	AGPAT2 (ENSCJAG00000010959) #20	ENSCJAG00000010944 #21	NOTCH1 (ENSCJAG00000010922) #22	SEC16A (ENSCJAG00000010865) #23	INPP5E (ENSCJAG00000010776) #24	PMPCA (ENSCJAG00000010849) #25	ENTR1 (ENSCJAG00000010838) #26	SNAPC4 (ENSCJAG00000010725) #27	CARD9 (ENSCJAG00000010809) #28	DNLZ (ENSCJAG00000010789) #29	GPSM1 (ENSCJAG00000010741) #30	CCDC187 (ENSCJAG00000010719)	QSOX2 (ENSCJAG00000010708) #33	LHX3 (ENSCJAG00000010692) #34	ENSCJAG00000086642	TMEM250 (ENSCJAG00000041863) #35	NACC2 (ENSCJAG00000010665) #36	UBAC1 (ENSCJAG00000048208) #37
Mas night monkey	MODERN SPECIES	540	ENSANAG00000024923	FBXW5 (ENSANAG00000038194)	TRAF2 (ENSANAG00000034527)	EDF1 (ENSANAG00000004851)	MAMDC4 (ENSANAG00000028683)	PHPT1 (ENSANAG00000034511)	AJM1 (ENSANAG00000033633)	RABL6 (ENSANAG00000038267)	ENSANAG00000038034	TMEM141 (ENSANAG00000032400)	LCN15 (ENSANAG00000036797) ##18	ENSANAG00000034333	DIPK1B (ENSANAG00000032828) #19	AGPAT2 (ENSANAG00000032299) #20	EGFL7 (ENSANAG00000028332) #21	NOTCH1 (ENSANAG00000025256) #22	SEC16A (ENSANAG00000034123) #23	INPP5E (ENSANAG00000023059) #24	PMPCA (ENSANAG00000021492) #25	ENTR1 (ENSANAG00000034914) #26	SNAPC4 (ENSANAG00000022824) #27	CARD9 (ENSANAG00000019448) #28	DNLZ (ENSANAG00000036704) #29	GPSM1 (ENSANAG00000035680) #30	CCDC187 (ENSANAG00000031832)	QSOX2 (ENSANAG00000022437) #33	LHX3 (ENSANAG00000006890) #34	ENSANAG00000020082 #35	NACC2 (ENSANAG00000031556) #36	UBAC1 (ENSANAG00000024496) #37	CAMSAP1 (ENSANAG00000034761)
Tarsier	MODERN SPECIES	2076																NOTCH1 (ENSTSYG00000027103) #22	SEC16A (ENSTSYG00000026997) #23
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00390000000529 #7	ENSGT00940000178229	ENSGT00940000158379.d #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Lemuriformes	ANCESTRAL SPECIES	12	ENSGT00390000000529 #7	ENSGT00940000178229	ENSGT00940000158379.d #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Lemuriformes_a	ANCESTRAL SPECIES	2	ENSGT00390000000529 #7	ENSGT00940000178229	ENSGT00940000158379.d #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Coquerels sifaka	MODERN SPECIES	599																NOTCH1 (ENSPCOG00000013084) #22	SEC16A (ENSPCOG00000024264) #23	INPP5E (ENSPCOG00000015380) #24	PMPCA (ENSPCOG00000022850) #25	ENTR1 (ENSPCOG00000018168) #26	SNAPC4 (ENSPCOG00000023591) #27	CARD9 (ENSPCOG00000028685) #28	DNLZ (ENSPCOG00000015608) #29	GPSM1 (ENSPCOG00000028807) #30	CCDC187 (ENSPCOG00000017104)	QSOX2 (ENSPCOG00000027755) #33	LHX3 (ENSPCOG00000020016) #34	NACC2 (ENSPCOG00000010696) #36	UBAC1 (ENSPCOG00000024301) #37	CAMSAP1 (ENSPCOG00000026385)	KCNT1 (ENSPCOG00000025697)
Greater bamboo lemur	MODERN SPECIES	1192												ENSPSMG00000015654	DIPK1B (ENSPSMG00000015645) #19	AGPAT2 (ENSPSMG00000015634) #20	EGFL7 (ENSPSMG00000015607) #21	NOTCH1 (ENSPSMG00000015576) #22	SEC16A (ENSPSMG00000015546) #23	INPP5E (ENSPSMG00000015450) #24	PMPCA (ENSPSMG00000015370) #25	ENTR1 (ENSPSMG00000015289) #26	SNAPC4 (ENSPSMG00000015238) #27	CARD9 (ENSPSMG00000015223) #28	DNLZ (ENSPSMG00000015188) #29	GPSM1 (ENSPSMG00000015085) #30	CCDC187 (ENSPSMG00000014972)	QSOX2 (ENSPSMG00000014959) #33	LHX3 (ENSPSMG00000014948) #34	TMEM250 (ENSPSMG00000014914) #35	NACC2 (ENSPSMG00000014898) #36	UBAC1 (ENSPSMG00000014874) #37	CAMSAP1 (ENSPSMG00000014846)
Mouse lemur	MODERN SPECIES	1	CACFD1 (ENSMICG00000031108) #7	ENSMICG00000011799 #8	ENSMICG00000047114 #8	REXO4 (ENSMICG00000008422) #9	STKLD1 (ENSMICG00000008399)	SURF4 (ENSMICG00000037009) #11	SURF2 (ENSMICG00000007604) #12	SURF1 (ENSMICG00000007597) #13	ENSMICG00000036165	MED22 (ENSMICG00000028119) #16	SURF6 (ENSMICG00000046077) #17	ABO (ENSMICG00000012209)	DIPK1B (ENSMICG00000015407) #19	AGPAT2 (ENSMICG00000017382) #20	EGFL7 (ENSMICG00000047232) #21	NOTCH1 (ENSMICG00000009527) #22	SEC16A (ENSMICG00000005865) #23	INPP5E (ENSMICG00000005855) #24	PMPCA (ENSMICG00000005847) #25	ENSMICG00000005829 #26	SNAPC4 (ENSMICG00000005804) #27	CARD9 (ENSMICG00000005799) #28	DNLZ (ENSMICG00000027594) #29	GPSM1 (ENSMICG00000033412) #30	ENSMICG00000027003	QSOX2 (ENSMICG00000000188) #33	LHX3 (ENSMICG00000030731) #34	TMEM250 (ENSMICG00000046963) #35	NACC2 (ENSMICG00000047846) #36	UBAC1 (ENSMICG00000006844) #37	CAMSAP1 (ENSMICG00000006834)
Bushbaby	MODERN SPECIES	202	ADAMTSL2 (ENSOGAG00000014056)	MYMK (ENSOGAG00000025687)	SLC2A6 (ENSOGAG00000014051)	ENSOGAG00000014043 #8	REXO4 (ENSOGAG00000014040) #9	STKLD1 (ENSOGAG00000014034)	SURF2 (ENSOGAG00000031360) #12	ENSOGAG00000024295 #11	ENSOGAG00000014027	MED22 (ENSOGAG00000014026) #16	SURF6 (ENSOGAG00000027199) #17	ABO (ENSOGAG00000029319)	DIPK1B (ENSOGAG00000008561) #19	AGPAT2 (ENSOGAG00000025726) #20	EGFL7 (ENSOGAG00000007178) #21	NOTCH1 (ENSOGAG00000015908) #22	SEC16A (ENSOGAG00000015887) #23	INPP5E (ENSOGAG00000015883) #24	ENSOGAG00000024858 #14	ENSOGAG00000007682 #15	PMPCA (ENSOGAG00000015875) #25	ENSOGAG00000015872 #26	SNAPC4 (ENSOGAG00000015861) #27	CARD9 (ENSOGAG00000024499) #28	DNLZ (ENSOGAG00000027386) #29	GPSM1 (ENSOGAG00000029436) #30	ENSOGAG00000031359	QSOX2 (ENSOGAG00000000724) #33	LHX3 (ENSOGAG00000000723) #34	TMEM250 (ENSOGAG00000029423) #35	NACC2 (ENSOGAG00000024802) #36
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.a ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.a ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.a ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Suina	ANCESTRAL SPECIES	47	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.a ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Pig	MODERN SPECIES	286	EDF1 (ENSSSCG00000038203)	MAMDC4 (ENSSSCG00000005832)	AJM1 (ENSSSCG00000057521)	RABL6 (ENSSSCG00000005841)	ENSSSCG00000005830	TMEM141 (ENSSSCG00000005842)	LCN15 (ENSSSCG00000038233) ##18	LCN8 (ENSSSCG00000021963) ##18	ENSSSCG00000005834 ##18	LCN6 (ENSSSCG00000005835) ##18	LCN10 (ENSSSCG00000005836) ##18	DIPK1B (ENSSSCG00000005837) #19	ENSSSCG00000040845 #20	AGPAT2 (ENSSSCG00000053941) #20	EGFL7 (ENSSSCG00000005828) #21	NOTCH1 (ENSSSCG00000038509) #22	SEC16A (ENSSSCG00000034854) #23	INPP5E (ENSSSCG00000040869) #24	PMPCA (ENSSSCG00000031413) #25	ENTR1 (ENSSSCG00000035221) #26	SNAPC4 (ENSSSCG00000038262) #27	CARD9 (ENSSSCG00000031715) #28	DNLZ (ENSSSCG00000034732) #29	GPSM1 (ENSSSCG00000039487) #30	ENSSSCG00000034036	QSOX2 (ENSSSCG00000040163) #33	LHX3 (ENSSSCG00000034657) #34	TMEM250 (ENSSSCG00000054336) #35	NACC2 (ENSSSCG00000040967) #36	UBAC1 (ENSSSCG00000033162) #37	CAMSAP1 (ENSSSCG00000005753)
Chacoan peccary	MODERN SPECIES	65																NOTCH1 (ENSCWAG00000015574) #22	SEC16A (ENSCWAG00000018195) #23	INPP5E (ENSCWAG00000018305) #24	PMPCA (ENSCWAG00000018330) #25	ENTR1 (ENSCWAG00000018378) #26	SNAPC4 (ENSCWAG00000018598) #27	CARD9 (ENSCWAG00000019093) #28	DNLZ (ENSCWAG00000019177) #29	ENSCWAG00000019190 #30
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.a ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT00950000184618	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.a ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Cetacea	ANCESTRAL SPECIES	9	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a.f	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT00950000184618	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.a ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a.f	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT00950000184618	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT00940000170859	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Odontoceti_a	ANCESTRAL SPECIES	19	ENSGT00940000162046	ENSGT00390000002738.a.f	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000153116.C.a	ENSGT00520000060469	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT00940000170859	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a.f	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000153116.C.a	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT00940000170859	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000156621	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a.f	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT00940000170859	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Narwhal	MODERN SPECIES	312	TRAF2 (ENSMMNG00015019230)	EDF1 (ENSMMNG00015019204)	MAMDC4 (ENSMMNG00015019122)	ENSMMNG00015019093	AJM1 (ENSMMNG00015019084)	RABL6 (ENSMMNG00015019023)	ENSMMNG00015018981	TMEM141 (ENSMMNG00015018964)	ENSMMNG00015018937	ENSMMNG00015018915	LCN6 (ENSMMNG00015018885) ##18	ENSMMNG00015018813 ##18	DIPK1B (ENSMMNG00015018734) #19	AGPAT2 (ENSMMNG00015018689) #20	EGFL7 (ENSMMNG00015018637) #21	NOTCH1 (ENSMMNG00015018566) #22	SEC16A (ENSMMNG00015018406) #23	INPP5E (ENSMMNG00015018352) #24	PMPCA (ENSMMNG00015018250) #25	ENTR1 (ENSMMNG00015018088) #26	SNAPC4 (ENSMMNG00015017988) #27	CARD9 (ENSMMNG00015017932) #28	DNLZ (ENSMMNG00015017904) #29	GPSM1 (ENSMMNG00015017768) #30	ENSMMNG00015017632	QSOX2 (ENSMMNG00015017566) #33	LHX3 (ENSMMNG00015017493) #34	TMEM250 (ENSMMNG00015017465) #35	NACC2 (ENSMMNG00015017441) #36	UBAC1 (ENSMMNG00015017402) #37	CAMSAP1 (ENSMMNG00015017305)
Beluga whale	MODERN SPECIES	19	TRAF2 (ENSDLEG00000015358)	EDF1 (ENSDLEG00000015396)	MAMDC4 (ENSDLEG00000015426)	ENSDLEG00000015526	CUNH9orf172 (ENSDLEG00000015531)	RABL6 (ENSDLEG00000015563)	ENSDLEG00000015951	TMEM141 (ENSDLEG00000015982)	ENSDLEG00000015991 ##18	ENSDLEG00000016011	LCN6 (ENSDLEG00000016024) ##18	ENSDLEG00000016061	FAM69B (ENSDLEG00000016090) #19	AGPAT2 (ENSDLEG00000016099) #20	EGFL7 (ENSDLEG00000016110) #21	NOTCH1 (ENSDLEG00000016186) #22	SEC16A (ENSDLEG00000016491) #23	INPP5E (ENSDLEG00000019359) #24	PMPCA (ENSDLEG00000019404) #25	SDCCAG3 (ENSDLEG00000019648) #26	SNAPC4 (ENSDLEG00000019669) #27	CARD9 (ENSDLEG00000019684) #28	DNLZ (ENSDLEG00000019697) #29	GPSM1 (ENSDLEG00000019707) #30	ENSDLEG00000000142	QSOX2 (ENSDLEG00000000181) #33	LHX3 (ENSDLEG00000000268) #34	TMEM250 (ENSDLEG00000000366) #35	NACC2 (ENSDLEG00000000381) #36	UBAC1 (ENSDLEG00000000420) #37	CAMSAP1 (ENSDLEG00000000466)
Vaquita	MODERN SPECIES	17	ENSPSNG00000002179	FBXW5 (ENSPSNG00000002217)	TRAF2 (ENSPSNG00000002244)	EDF1 (ENSPSNG00000002285)	PHPT1 (ENSPSNG00000002382)	ENSPSNG00000002512	ENSPSNG00000002607	TMEM141 (ENSPSNG00000002634)	ENSPSNG00000002656	ENSPSNG00000002683	LCN6 (ENSPSNG00000002714) ##18	LCN10 (ENSPSNG00000002748) ##18	DIPK1B (ENSPSNG00000002782) #19	AGPAT2 (ENSPSNG00000002833) #20	EGFL7 (ENSPSNG00000002877) #21	NOTCH1 (ENSPSNG00000002953) #22	SEC16A (ENSPSNG00000003074) #23	INPP5E (ENSPSNG00000003142) #24	PMPCA (ENSPSNG00000003191) #25	ENTR1 (ENSPSNG00000003257) #26	SNAPC4 (ENSPSNG00000003425) #27	CARD9 (ENSPSNG00000003517) #28	DNLZ (ENSPSNG00000003537) #29	GPSM1 (ENSPSNG00000003585) #30	ENSPSNG00000003644	QSOX2 (ENSPSNG00000003669) #33	LHX3 (ENSPSNG00000003704) #34	TMEM250 (ENSPSNG00000003733) #35	NACC2 (ENSPSNG00000003746) #36	UBAC1 (ENSPSNG00000003773) #37	CAMSAP1 (ENSPSNG00000003852)
Dolphin	MODERN SPECIES	3327											ENSTTRG00000007589	LCN6 (ENSTTRG00000007588) ##18	ENSTTRG00000007587	AGPAT2 (ENSTTRG00000007586) #20	EGFL7 (ENSTTRG00000007585) #21	NOTCH1 (ENSTTRG00000007583) #22	SEC16A (ENSTTRG00000007581) #23	INPP5E (ENSTTRG00000007580) #24	PMPCA (ENSTTRG00000007579) #25	ENTR1 (ENSTTRG00000007578) #26	ENSTTRG00000007574 #27	CARD9 (ENSTTRG00000007573) #28	ENSTTRG00000007572	GPSM1 (ENSTTRG00000007571) #30	QSOX2 (ENSTTRG00000007570) #33	LHX3 (ENSTTRG00000007569) #34
Sperm whale	MODERN SPECIES	4	TRAF2 (ENSPCTG00005008255)	FBXW5 (ENSPCTG00005008288)	MAMDC4 (ENSPCTG00005008346)	PHPT1 (ENSPCTG00005008655)	AJM1 (ENSPCTG00005008687)	RABL6 (ENSPCTG00005008721)	CCDC183 (ENSPCTG00005008792)	ENSPCTG00005008876	ENSPCTG00005008909	ENSPCTG00005008947	LCN8 (ENSPCTG00005008995) ##18	ENSPCTG00005009085	DIPK1B (ENSPCTG00005009146) #19	AGPAT2 (ENSPCTG00005009252) #20	EGFL7 (ENSPCTG00005009325) #21	NOTCH1 (ENSPCTG00005009415) #22	SEC16A (ENSPCTG00005009503) #23	INPP5E (ENSPCTG00005009723) #24	PMPCA (ENSPCTG00005009778) #25	ENTR1 (ENSPCTG00005009894) #26	SNAPC4 (ENSPCTG00005010069) #27	CARD9 (ENSPCTG00005010146) #28	DNLZ (ENSPCTG00005010215) #29	GPSM1 (ENSPCTG00005010276) #30	ENSPCTG00005010541	QSOX2 (ENSPCTG00005010784) #33	LHX3 (ENSPCTG00005010847) #34	ENSPCTG00005010974	TMEM250 (ENSPCTG00005010996) #35	NACC2 (ENSPCTG00005011010) #36	UBAC1 (ENSPCTG00005011069) #37
Blue whale	MODERN SPECIES	17	TRAF2 (ENSBMSG00010006905)	EDF1 (ENSBMSG00010006887)	MAMDC4 (ENSBMSG00010006817)	PHPT1 (ENSBMSG00010006736)	AJM1 (ENSBMSG00010006721)	RABL6 (ENSBMSG00010006683)	CCDC183 (ENSBMSG00010006635)	TMEM141 (ENSBMSG00010006608)	LCN8 (ENSBMSG00010006591) ##18	ENSBMSG00010006543 ##18	LCN6 (ENSBMSG00010006505) ##18	LCN10 (ENSBMSG00010006474) ##18	DIPK1B (ENSBMSG00010006420) #19	AGPAT2 (ENSBMSG00010006383) #20	EGFL7 (ENSBMSG00010006311) #21	NOTCH1 (ENSBMSG00010006271) #22	SEC16A (ENSBMSG00010006223) #23	INPP5E (ENSBMSG00010006192) #24	PMPCA (ENSBMSG00010006169) #25	ENTR1 (ENSBMSG00010006084) #26	SNAPC4 (ENSBMSG00010005976) #27	CARD9 (ENSBMSG00010005914) #28	DNLZ (ENSBMSG00010005887) #29	GPSM1 (ENSBMSG00010005849) #30	ENSBMSG00010005810	QSOX2 (ENSBMSG00010005791) #33	LHX3 (ENSBMSG00010005757) #34	NACC2 (ENSBMSG00010005731) #36	UBAC1 (ENSBMSG00010005712) #37	CAMSAP1 (ENSBMSG00010005670)	KCNT1 (ENSBMSG00010005085)
Pecora	ANCESTRAL SPECIES	5	ENSGT00390000000529 #7	ENSGT00940000178229	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339.f #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Percora_a	ANCESTRAL SPECIES	27	ENSGT00390000000529 #7	ENSGT00940000178229	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339.f #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Bovidae	ANCESTRAL SPECIES	5	ENSGT00390000000529 #7	ENSGT00940000178229	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339.f #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Caprinae	ANCESTRAL SPECIES	27	ENSGT00390000000529 #7	ENSGT00940000178229	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339.f #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Rambouillet Sheep	MODERN SPECIES	19	ENSOARG00020002327	ENSOARG00020002341 #8	STKLD1 (ENSOARG00020002366)	SURF4 (ENSOARG00020002392) #11	SURF2 (ENSOARG00020002406) #12	SURF1 (ENSOARG00020002412) #13	ENSOARG00020002423	MED22 (ENSOARG00020002441) #16	SURF6 (ENSOARG00020002448) #17	ENSOARG00020002455	DIPK1B (ENSOARG00020002483) #19	ENSOARG00020002513 #20	EGFL7 (ENSOARG00020002558) #21	ENSOARG00020002591	ENSOARG00020002602	NOTCH1 (ENSOARG00020002622) #22	INPP5E (ENSOARG00020002704) #24	PMPCA (ENSOARG00020002792) #25	ENTR1 (ENSOARG00020002831) #26	SNAPC4 (ENSOARG00020003067) #27	CARD9 (ENSOARG00020004236) #28	ENSOARG00020004267	GPSM1 (ENSOARG00020004303) #30	ENSOARG00020004433	QSOX2 (ENSOARG00020004598) #33	LHX3 (ENSOARG00020004662) #34	TMEM250 (ENSOARG00020004761) #35	NACC2 (ENSOARG00020004779) #36	UBAC1 (ENSOARG00020004817) #37	PAEP (ENSOARG00020004839) ##18	CAMSAP1 (ENSOARG00020004888)
Goat	MODERN SPECIES	2	MYMK (ENSCHIG00000025700)	SLC2A6 (ENSCHIG00000022381)	CACFD1 (ENSCHIG00000022694) #7	ADAMTS13 (ENSCHIG00000025823) #8	REXO4 (ENSCHIG00000009517) #9	SURF4 (ENSCHIG00000016835) #11	SURF2 (ENSCHIG00000022633) #12	SURF1 (ENSCHIG00000005972) #13	ENSCHIG00000003945	MED22 (ENSCHIG00000025808) #16	SURF6 (ENSCHIG00000025220) #17	ENSCHIG00000016256	DIPK1B (ENSCHIG00000014246) #19	AGPAT2 (ENSCHIG00000014858) #20	EGFL7 (ENSCHIG00000023457) #21	NOTCH1 (ENSCHIG00000021033) #22	SEC16A (ENSCHIG00000020286) #23	INPP5E (ENSCHIG00000004726) #24	PMPCA (ENSCHIG00000013065) #25	ENTR1 (ENSCHIG00000018825) #26	SNAPC4 (ENSCHIG00000013796) #27	CARD9 (ENSCHIG00000013779) #28	DNLZ (ENSCHIG00000019744) #29	ENSCHIG00000017713 #30	QSOX2 (ENSCHIG00000014232) #33	LHX3 (ENSCHIG00000024793) #34	TMEM250 (ENSCHIG00000010273) #35	NACC2 (ENSCHIG00000007966) #36	UBAC1 (ENSCHIG00000018504) #37	CAMSAP1 (ENSCHIG00000016116)	KCNT1 (ENSCHIG00000007884)
Bovinae	ANCESTRAL SPECIES	4	ENSGT00390000000529 #7	ENSGT00940000178229	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339.f #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Bos	ANCESTRAL SPECIES	5	ENSGT00940000178229	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339.f #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000015224.c.a.a.b.e.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Bos_b	ANCESTRAL SPECIES	16	ENSGT00940000178229	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339.f #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000015224.c.a.a.b.e.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Hybrid Bos Indicus	MODERN SPECIES	2	ADAMTS13 (ENSBIXG00005029885) #8	REXO4 (ENSBIXG00005029874) #9	STKLD1 (ENSBIXG00005029843)	SURF4 (ENSBIXG00005029795) #11	SURF2 (ENSBIXG00005029782) #12	SURF1 (ENSBIXG00005029756) #13	ENSBIXG00005029716	MED22 (ENSBIXG00005029700) #16	SURF6 (ENSBIXG00005029689) #17	ENSBIXG00005029686	ENSBIXG00005029668	ENSBIXG00005029644	DIPK1B (ENSBIXG00005029611) #19	ENSBIXG00005029589 #20	ENSBIXG00005029555 #21	NOTCH1 (ENSBIXG00005029490) #22	SEC16A (ENSBIXG00005007954) #23	INPP5E (ENSBIXG00005000112) #24	PMPCA (ENSBIXG00005008108) #25	ENTR1 (ENSBIXG00005008201) #26	SNAPC4 (ENSBIXG00005008329) #27	CARD9 (ENSBIXG00005008353) #28	DNLZ (ENSBIXG00005008367) #29	GPSM1 (ENSBIXG00005008412) #30	ENSBIXG00005008484	QSOX2 (ENSBIXG00005008520) #33	LHX3 (ENSBIXG00005008551) #34	TMEM250 (ENSBIXG00005008570) #35	NACC2 (ENSBIXG00005008585) #36	UBAC1 (ENSBIXG00005008614) #37	CAMSAP1 (ENSBIXG00005008646)
Cow	MODERN SPECIES	2	ADAMTS13 (ENSBTAG00000015093) #8	REXO4 (ENSBTAG00000019721) #9	STKLD1 (ENSBTAG00000004140)	SURF4 (ENSBTAG00000051352) #11	SURF2 (ENSBTAG00000000046) #12	SURF1 (ENSBTAG00000030384) #13	RPL7A (ENSBTAG00000011559)	MED22 (ENSBTAG00000011556) #16	SURF6 (ENSBTAG00000011554) #17	ABO (ENSBTAG00000012525)	ENSBTAG00000030281	DIPK1B (ENSBTAG00000021928) #19	AGPAT2 (ENSBTAG00000025161) #20	EGFL7 (ENSBTAG00000030278) #21	ENSBTAG00000049379	NOTCH1 (ENSBTAG00000022799) #22	SEC16A (ENSBTAG00000023933) #23	INPP5E (ENSBTAG00000001354) #24	PMPCA (ENSBTAG00000001353) #25	ENTR1 (ENSBTAG00000001352) #26	SNAPC4 (ENSBTAG00000000054) #27	CARD9 (ENSBTAG00000006572) #28	DNLZ (ENSBTAG00000012880) #29	GPSM1 (ENSBTAG00000018799) #30	ENSBTAG00000023064	QSOX2 (ENSBTAG00000011129) #33	LHX3 (ENSBTAG00000011124) #34	TMEM250 (ENSBTAG00000046939)	NACC2 (ENSBTAG00000020490) #36	UBAC1 (ENSBTAG00000039851) #37	CAMSAP1 (ENSBTAG00000006008)
Bos_a	ANCESTRAL SPECIES	23	ENSGT00940000178229	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339.f #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000015224.c.a.a.b.e.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Domestic yak	MODERN SPECIES	28	CACFD1 (ENSBGRG00000003856) #7	ADAMTS13 (ENSBGRG00000003687) #8	REXO4 (ENSBGRG00000003644) #9	STKLD1 (ENSBGRG00000003549)	SURF4 (ENSBGRG00000003520) #11	SURF2 (ENSBGRG00000003491) #12	SURF1 (ENSBGRG00000003459) #13	ENSBGRG00000025968	MED22 (ENSBGRG00000025954) #16	SURF6 (ENSBGRG00000025947) #17	ENSBGRG00000025935	ENSBGRG00000025928	DIPK1B (ENSBGRG00000025911) #19	AGPAT2 (ENSBGRG00000025897) #20	ENSBGRG00000025875 #21	NOTCH1 (ENSBGRG00000025848) #22	SEC16A (ENSBGRG00000025640) #23	INPP5E (ENSBGRG00000025512) #24	PMPCA (ENSBGRG00000025447) #25	ENTR1 (ENSBGRG00000025355) #26	ENSBGRG00000025344	SNAPC4 (ENSBGRG00000025195) #27	CARD9 (ENSBGRG00000025118) #28	DNLZ (ENSBGRG00000025104) #29	GPSM1 (ENSBGRG00000024972) #30	ENSBGRG00000024934	QSOX2 (ENSBGRG00000024893) #33	LHX3 (ENSBGRG00000024850) #34	ENSBGRG00000024840	NACC2 (ENSBGRG00000024826) #36	UBAC1 (ENSBGRG00000024753) #37
Wild yak	MODERN SPECIES	161												ENSBMUG00000001057	DIPK1B (ENSBMUG00000001082) #19	AGPAT2 (ENSBMUG00000001095) #20	EGFL7 (ENSBMUG00000001124) #21	NOTCH1 (ENSBMUG00000002343) #22	SEC16A (ENSBMUG00000003595) #23	INPP5E (ENSBMUG00000004106) #24	PMPCA (ENSBMUG00000004156) #25	ENTR1 (ENSBMUG00000004170) #26	SNAPC4 (ENSBMUG00000004338) #27	CARD9 (ENSBMUG00000004473) #28	DNLZ (ENSBMUG00000004493) #29	GPSM1 (ENSBMUG00000004502) #30	ENSBMUG00000004556	QSOX2 (ENSBMUG00000004633) #33	LHX3 (ENSBMUG00000004664) #34	ENSBMUG00000004673 #35	NACC2 (ENSBMUG00000004700) #36	UBAC1 (ENSBMUG00000004715) #37	CAMSAP1 (ENSBMUG00000004848)
Siberian musk deer	MODERN SPECIES	1178	MYMK (ENSMMSG00000017340)	SLC2A6 (ENSMMSG00000017296)	CACFD1 (ENSMMSG00000017256) #7	ENSMMSG00000017237	ENSMMSG00000017170 #8	REXO4 (ENSMMSG00000017141) #9	SURF4 (ENSMMSG00000017110) #11	SURF2 (ENSMMSG00000017092) #12	ENSMMSG00000017048 #13	ENSMMSG00000017005	MED22 (ENSMMSG00000019115) #16	SURF6 (ENSMMSG00000019063) #17	DIPK1B (ENSMMSG00000018999) #19	AGPAT2 (ENSMMSG00000018937) #20	EGFL7 (ENSMMSG00000018878) #21	NOTCH1 (ENSMMSG00000018769) #22	SEC16A (ENSMMSG00000018596) #23	INPP5E (ENSMMSG00000018533) #24	PMPCA (ENSMMSG00000018461) #25	ENTR1 (ENSMMSG00000018277) #26	SNAPC4 (ENSMMSG00000018179) #27	CARD9 (ENSMMSG00000018040) #28	DNLZ (ENSMMSG00000018005) #29	GPSM1 (ENSMMSG00000017853) #30	ENSMMSG00000017799	QSOX2 (ENSMMSG00000017697) #33	LHX3 (ENSMMSG00000017607) #34	NACC2 (ENSMMSG00000017566) #36	UBAC1 (ENSMMSG00000017512) #37	CAMSAP1 (ENSMMSG00000017438)	KCNT1 (ENSMMSG00000011544)
Yarkand deer	MODERN SPECIES	2	SLC2A6 (ENSCHYG00000010600)	CACFD1 (ENSCHYG00000010507) #7	ADAMTS13 (ENSCHYG00000010317) #8	REXO4 (ENSCHYG00000010246) #9	ENSCHYG00000010174 #10	SURF4 (ENSCHYG00000009955) #11	SURF2 (ENSCHYG00000009850) #12	SURF1 (ENSCHYG00000009643) #13	ENSCHYG00000009488	MED22 (ENSCHYG00000009429) #16	SURF6 (ENSCHYG00000009401) #17	ENSCHYG00000009352	DIPK1B (ENSCHYG00000009252) #19	AGPAT2 (ENSCHYG00000009123) #20	ENSCHYG00000008811 #21	NOTCH1 (ENSCHYG00000008626) #22	SEC16A (ENSCHYG00000007686) #23	INPP5E (ENSCHYG00000007535) #24	PMPCA (ENSCHYG00000007436) #25	ENTR1 (ENSCHYG00000007198) #26	SNAPC4 (ENSCHYG00000007022) #27	CARD9 (ENSCHYG00000006923) #28	GPSM1 (ENSCHYG00000006855) #30	ENSCHYG00000006716	QSOX2 (ENSCHYG00000006603) #33	LHX3 (ENSCHYG00000026603) #34	TMEM250 (ENSCHYG00000026594) #35	NACC2 (ENSCHYG00000026588) #36	UBAC1 (ENSCHYG00000026555) #37	CAMSAP1 (ENSCHYG00000026516)	KCNT1 (ENSCHYG00000025895)
Camelidae	ANCESTRAL SPECIES	65	ENSGT00390000000529 #7	ENSGT00940000178229	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.m.b	ENSGT00390000004339.e.b #16	ENSGT00940000170286	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220.c #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Arabian camel	MODERN SPECIES	30	ENSCDRG00005000622	ENSCDRG00005000643 #8	REXO4 (ENSCDRG00005000665) #9	STKLD1 (ENSCDRG00005000727)	ENSCDRG00005000794 #11	SURF2 (ENSCDRG00005000808) #12	ENSCDRG00005000827	SURF1 (ENSCDRG00005000843) #13	ENSCDRG00005000860	ENSCDRG00005000916 #16	ENSCDRG00005000937	ENSCDRG00005000956	DIPK1B (ENSCDRG00005001006) #19	AGPAT2 (ENSCDRG00005001034) #20	ENSCDRG00005001079 #21	NOTCH1 (ENSCDRG00005001130) #22	SEC16A (ENSCDRG00005001240) #23	INPP5E (ENSCDRG00005001361) #24	PMPCA (ENSCDRG00005001401) #25	ENTR1 (ENSCDRG00005001472) #26	SNAPC4 (ENSCDRG00005001573) #27	CARD9 (ENSCDRG00005001608) #28	ENSCDRG00005001626 #29	GPSM1 (ENSCDRG00005001642) #30	ENSCDRG00005001715	QSOX2 (ENSCDRG00005001830) #33	LHX3 (ENSCDRG00005001876) #34	TMEM250 (ENSCDRG00005001892) #35	NACC2 (ENSCDRG00005001900) #36	UBAC1 (ENSCDRG00005001921) #37	CAMSAP1 (ENSCDRG00005001959)
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.a ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Carnivora	ANCESTRAL SPECIES	18	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000153294.n	ENSGT00390000014818 #14	ENSGT00940000153294.m.a	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a.n	ENSGT00950000182858.A.a.a.m	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Caniformia	ANCESTRAL SPECIES	16	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.a ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Caniformia_b	ANCESTRAL SPECIES	12	ENSGT01050000244868.b.b ##18	ENSGT00440000034309	ENSGT00990000203858	ENSGT00730000111276	ENSGT00940000156621	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000153116.C.a	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Ursidae	ANCESTRAL SPECIES	6	ENSGT00390000008519	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00520000060469	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT00940000170859	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Giant Panda	MODERN SPECIES	17	ENSAMEG00000029778 ##18	ENSAMEG00000013340	LCN12 (ENSAMEG00000013336) ##18	C8G (ENSAMEG00000013326)	FBXW5 (ENSAMEG00000013314)	TRAF2 (ENSAMEG00000013275)	EDF1 (ENSAMEG00000024052)	PHPT1 (ENSAMEG00000013248)	AJM1 (ENSAMEG00000026912)	RABL6 (ENSAMEG00000013211)	CCDC183 (ENSAMEG00000013189)	ENSAMEG00000027528	DIPK1B (ENSAMEG00000023983) #19	AGPAT2 (ENSAMEG00000003965) #20	EGFL7 (ENSAMEG00000003952) #21	NOTCH1 (ENSAMEG00000003827) #22	SEC16A (ENSAMEG00000003760) #23	INPP5E (ENSAMEG00000003733) #24	PMPCA (ENSAMEG00000003694) #25	ENTR1 (ENSAMEG00000003675) #26	SNAPC4 (ENSAMEG00000003669) #27	CARD9 (ENSAMEG00000003641) #28	DNLZ (ENSAMEG00000003639) #29	GPSM1 (ENSAMEG00000003593) #30	ENSAMEG00000029669	ENSAMEG00000003573 #33	LHX3 (ENSAMEG00000003556) #34	TMEM250 (ENSAMEG00000003554) #35	NACC2 (ENSAMEG00000003538) #36	ENSAMEG00000003506 #37	CAMSAP1 (ENSAMEG00000003475)
Ursus	ANCESTRAL SPECIES	118	ENSGT00940000156621	ENSGT00390000008519	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT00940000170859	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
American black bear	MODERN SPECIES	2059																NOTCH1 (ENSUAMG00000026046) #22	SEC16A (ENSUAMG00000000030) #23	INPP5E (ENSUAMG00000000095) #24
Mustelinae	ANCESTRAL SPECIES	12	ENSGT00940000156621	ENSGT00390000008519	ENSGT00940000162046	ENSGT00390000002738.a	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.a ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
American mink	MODERN SPECIES	395													DIPK1B (ENSNVIG00000010736) #19	AGPAT2 (ENSNVIG00000010745) #20	EGFL7 (ENSNVIG00000010752) #21	NOTCH1 (ENSNVIG00000010812) #22	SEC16A (ENSNVIG00000010899) #23	INPP5E (ENSNVIG00000012928) #24	PMPCA (ENSNVIG00000013020) #25	ENTR1 (ENSNVIG00000013185) #26	SNAPC4 (ENSNVIG00000013351) #27	CARD9 (ENSNVIG00000014001) #28	DNLZ (ENSNVIG00000014097) #29	GPSM1 (ENSNVIG00000014115) #30	ENSNVIG00000014282	QSOX2 (ENSNVIG00000014518) #33	LHX3 (ENSNVIG00000014671) #34	TMEM250 (ENSNVIG00000014917) #35	NACC2 (ENSNVIG00000014952) #36	UBAC1 (ENSNVIG00000015186) #37	CAMSAP1 (ENSNVIG00000015998)
Ferret	MODERN SPECIES	218	EDF1 (ENSMPUG00000011008)	ENSMPUG00000019197	RABL6 (ENSMPUG00000011046)	ENSMPUG00000011120	TMEM141 (ENSMPUG00000011146)	LCN15 (ENSMPUG00000011152) ##18	LCN8 (ENSMPUG00000011189) ##18	ENSMPUG00000011204 ##18	LCN6 (ENSMPUG00000011217) ##18	LCN10 (ENSMPUG00000011234) ##18	DIPK1B (ENSMPUG00000011247) #19	AGPAT2 (ENSMPUG00000011249) #20	ENSMPUG00000019202	EGFL7 (ENSMPUG00000011294) #21	ENSMPUG00000011321	NOTCH1 (ENSMPUG00000011325) #22	SEC16A (ENSMPUG00000011340) #23	INPP5E (ENSMPUG00000011487) #24	PMPCA (ENSMPUG00000011493) #25	ENTR1 (ENSMPUG00000011499) #26	SNAPC4 (ENSMPUG00000011503) #27	CARD9 (ENSMPUG00000011535) #28	ENSMPUG00000011563	ENSMPUG00000019205	GPSM1 (ENSMPUG00000011570) #30	ENSMPUG00000019209	ENSMPUG00000011579	ENSMPUG00000011582	QSOX2 (ENSMPUG00000011601) #33	LHX3 (ENSMPUG00000011666) #34	NACC2 (ENSMPUG00000011704) #36
Canidae	ANCESTRAL SPECIES	2	ENSGT00730000111276	ENSGT00940000156621	ENSGT00390000008519	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000163544	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00990000203858	ENSGT00730000111276	ENSGT00940000156621	ENSGT00390000008519	ENSGT00390000002738.a	ENSGT00390000016543	ENSGT00390000016002	ENSGT00940000153116.D	ENSGT01050000244868.a.a.b.a.b ##18	ENSGT01050000244868.a.a.b.b.a.b ##18	ENSGT01050000244868.a.a.b.b.b.b ##18	ENSGT01050000244868.a.a.b.b.b.a ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Dog	MODERN SPECIES	37	C8G (ENSCAFG00845005165)	FBXW5 (ENSCAFG00845005172)	ENSCAFG00845005180	TRAF2 (ENSCAFG00845005186)	EDF1 (ENSCAFG00845005198)	PHPT1 (ENSCAFG00845005276)	AJM1 (ENSCAFG00845005285)	RABL6 (ENSCAFG00845005293)	LCN15 (ENSCAFG00845005322) ##18	LCN8 (ENSCAFG00845005343) ##18	LCN6 (ENSCAFG00845005355) ##18	ENSCAFG00845005360 ##18	DIPK1B (ENSCAFG00845005381) #19	AGPAT2 (ENSCAFG00845005389) #20	ENSCAFG00845005400 #21	NOTCH1 (ENSCAFG00845005453) #22	SEC16A (ENSCAFG00845005678) #23	INPP5E (ENSCAFG00845005885) #24	PMPCA (ENSCAFG00845005923) #25	ENTR1 (ENSCAFG00845005993) #26	SNAPC4 (ENSCAFG00845006095) #27	CARD9 (ENSCAFG00845006183) #28	DNLZ (ENSCAFG00845006222) #29	GPSM1 (ENSCAFG00845006295) #30	ENSCAFG00845006466	QSOX2 (ENSCAFG00845006815) #33	LHX3 (ENSCAFG00845007030) #34	TMEM250 (ENSCAFG00845007107) #35	NACC2 (ENSCAFG00845007192) #36	UBAC1 (ENSCAFG00845007292) #37	CAMSAP1 (ENSCAFG00845007447)
Dingo	MODERN SPECIES	327	ENSCAFG00020002821	FBXW5 (ENSCAFG00020002809)	TRAF2 (ENSCAFG00020002801)	EDF1 (ENSCAFG00020002800)	PHPT1 (ENSCAFG00020002736)	AJM1 (ENSCAFG00020002731)	RABL6 (ENSCAFG00020002727)	ENSCAFG00020002704	LCN15 (ENSCAFG00020002693) ##18	LCN8 (ENSCAFG00020002687) ##18	LCN6 (ENSCAFG00020002660) ##18	LCN10 (ENSCAFG00020002649) ##18	ENSCAFG00020002631 #19	AGPAT2 (ENSCAFG00020002617) #20	EGFL7 (ENSCAFG00020002575) #21	NOTCH1 (ENSCAFG00020002327) #22	SEC16A (ENSCAFG00020002294) #23	INPP5E (ENSCAFG00020002279) #24	PMPCA (ENSCAFG00020002265) #25	ENTR1 (ENSCAFG00020002262) #26	SNAPC4 (ENSCAFG00020002256) #27	CARD9 (ENSCAFG00020002246) #28	DNLZ (ENSCAFG00020002235) #29	GPSM1 (ENSCAFG00020002226) #30	ENSCAFG00020002190	QSOX2 (ENSCAFG00020002044) #33	LHX3 (ENSCAFG00020001973) #34	TMEM250 (ENSCAFG00020001965) #35	NACC2 (ENSCAFG00020001961) #36	UBAC1 (ENSCAFG00020001955) #37	CAMSAP1 (ENSCAFG00020001481)
Red fox	MODERN SPECIES	166	ENSVVUG00000026042	FBXW5 (ENSVVUG00000026043)	TRAF2 (ENSVVUG00000026044)	ENSVVUG00000026045	AJM1 (ENSVVUG00000026054)	RABL6 (ENSVVUG00000026058)	CCDC183 (ENSVVUG00000026063)	TMEM141 (ENSVVUG00000026066)	LCN15 (ENSVVUG00000026067) ##18	ENSVVUG00000026068	LCN6 (ENSVVUG00000026069) ##18	LCN10 (ENSVVUG00000026072) ##18	FAM69B (ENSVVUG00000026085) #19	AGPAT2 (ENSVVUG00000026090) #20	EGFL7 (ENSVVUG00000026092) #21	NOTCH1 (ENSVVUG00000026126) #22	SEC16A (ENSVVUG00000026728) #23	INPP5E (ENSVVUG00000026975) #24	PMPCA (ENSVVUG00000027003) #25	ENTR1 (ENSVVUG00000027138) #26	SNAPC4 (ENSVVUG00000027148) #27	CARD9 (ENSVVUG00000027169) #28	DNLZ (ENSVVUG00000027171) #29	GPSM1 (ENSVVUG00000027177) #30	ENSVVUG00000027184	QSOX2 (ENSVVUG00000027191) #33	LHX3 (ENSVVUG00000027200) #34	TMEM250 (ENSVVUG00000027207) #35	NACC2 (ENSVVUG00000027208) #36	UBAC1 (ENSVVUG00000027213) #37	CAMSAP1 (ENSVVUG00000027215)
Felidae	ANCESTRAL SPECIES	16	ENSGT00390000000529 #7	ENSGT00940000178229	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800.a #12	ENSGT00530000064194 #13	ENSGT00940000153294.n	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a.m	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570.b #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Panthera	ANCESTRAL SPECIES	11	ENSGT00390000000529 #7	ENSGT00940000178229	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800.a #12	ENSGT00530000064194 #13	ENSGT00940000153294.n	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a.m	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570.b #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Panthera_a	ANCESTRAL SPECIES	10	ENSGT00390000000529 #7	ENSGT00940000178229	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800.a #12	ENSGT00530000064194 #13	ENSGT00940000153294.n	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a.m	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570.b #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
lion	MODERN SPECIES	13	CACFD1 (ENSPLOG00000020451) #7	ENSPLOG00000020419	ENSPLOG00000020374 #8	REXO4 (ENSPLOG00000020344) #9	STKLD1 (ENSPLOG00000020166)	SURF4 (ENSPLOG00000020111) #11	ENSPLOG00000020076 #12	SURF1 (ENSPLOG00000020010) #13	RPL7A (ENSPLOG00000019949)	ENSPLOG00000019895 #16	SURF6 (ENSPLOG00000019851) #17	ABO (ENSPLOG00000019802)	DIPK1B (ENSPLOG00000019737) #19	AGPAT2 (ENSPLOG00000019691) #20	ENSPLOG00000019622 #21	NOTCH1 (ENSPLOG00000019561) #22	SEC16A (ENSPLOG00000019490) #23	INPP5E (ENSPLOG00000019443) #24	PMPCA (ENSPLOG00000019328) #25	ENTR1 (ENSPLOG00000019090) #26	SNAPC4 (ENSPLOG00000019034) #27	CARD9 (ENSPLOG00000018978) #28	DNLZ (ENSPLOG00000018907) #29	GPSM1 (ENSPLOG00000018756) #30	ENSPLOG00000018664	QSOX2 (ENSPLOG00000018555) #33	LHX3 (ENSPLOG00000018414) #34	TMEM250 (ENSPLOG00000018388) #35	NACC2 (ENSPLOG00000018337) #36	UBAC1 (ENSPLOG00000018294) #37	CAMSAP1 (ENSPLOG00000018226)
Cat	MODERN SPECIES	244	CACFD1 (ENSFCAG00000007078) #7	REXO4 (ENSFCAG00000011652) #9	ADAMTS13 (ENSFCAG00000026549) #8	STKLD1 (ENSFCAG00000003766)	SURF4 (ENSFCAG00000043834) #11	SURF2 (ENSFCAG00000036464) #12	SURF1 (ENSFCAG00000034840) #13	RPL7A (ENSFCAG00000044737)	MED22 (ENSFCAG00000005823) #16	SURF6 (ENSFCAG00000040914) #17	ENSFCAG00000025873	ENSFCAG00000051617	DIPK1B (ENSFCAG00000046165) #19	AGPAT2 (ENSFCAG00000011607) #20	EGFL7 (ENSFCAG00000011605) #21	NOTCH1 (ENSFCAG00000023517) #22	SEC16A (ENSFCAG00000024359) #23	INPP5E (ENSFCAG00000007225) #24	PMPCA (ENSFCAG00000007223) #25	ENTR1 (ENSFCAG00000007222) #26	SNAPC4 (ENSFCAG00000028095) #27	CARD9 (ENSFCAG00000042261) #28	GPSM1 (ENSFCAG00000007220) #30	ENSFCAG00000045910	QSOX2 (ENSFCAG00000012324) #33	LHX3 (ENSFCAG00000042025) #34	TMEM250 (ENSFCAG00000029518) #35	NACC2 (ENSFCAG00000009352) #36	UBAC1 (ENSFCAG00000010881) #37	CAMSAP1 (ENSFCAG00000001822)	KCNT1 (ENSFCAG00000018193)
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT00940000159718	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000164320	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Equus	ANCESTRAL SPECIES	30	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531.qb.b	ENSGT00940000157531.qb.a	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.b.b.b.a.c ##18	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b.f.a	ENSGT00940000156880
Horse	MODERN SPECIES	17	BRD3 (ENSECAG00000021276)	WDR5 (ENSECAG00000017389)	RXRA (ENSECAG00000019365)	COL5A1 (ENSECAG00000042356)	ENSECAG00000037647	ENSECAG00000000436	OLFM1 (ENSECAG00000016957)	PPP1R26 (ENSECAG00000038957)	ENSECAG00000029848	MRPS2 (ENSECAG00000048606)	LCN1 (ENSECAG00000032975) #18	ENSECAG00000029369 ##18	DIPK1B (ENSECAG00000005285) #19	AGPAT2 (ENSECAG00000010932) #20	EGFL7 (ENSECAG00000015593) #21	NOTCH1 (ENSECAG00000022405) #22	SEC16A (ENSECAG00000006377) #23	INPP5E (ENSECAG00000019901) #24	PMPCA (ENSECAG00000022206) #25	ENTR1 (ENSECAG00000010463) #26	SNAPC4 (ENSECAG00000015762) #27	CARD9 (ENSECAG00000019300) #28	GPSM1 (ENSECAG00000011306) #30	CCDC187 (ENSECAG00000019156)	QSOX2 (ENSECAG00000020761) #33	LHX3 (ENSECAG00000021983) #34	TMEM250 (ENSECAG00000032576) #35	NACC2 (ENSECAG00000006963) #36	UBAC1 (ENSECAG00000011717) #37	CAMSAP1 (ENSECAG00000017095)	KCNT1 (ENSECAG00000003311)
Donkey	MODERN SPECIES	1	BRD3 (ENSEASG00005010664)	WDR5 (ENSEASG00005010670)	RXRA (ENSEASG00005010676)	COL5A1 (ENSEASG00005032204)	ENSEASG00005028080	ENSEASG00005010692	OLFM1 (ENSEASG00005010702)	PPP1R26 (ENSEASG00005010706)	PIERCE1 (ENSEASG00005010708)	MRPS2 (ENSEASG00005010711)	ENSEASG00005027005 #18	ENSEASG00005031389 ##18	DIPK1B (ENSEASG00005038302) #19	AGPAT2 (ENSEASG00005032738) #20	EGFL7 (ENSEASG00005018458) #21	NOTCH1 (ENSEASG00005018445) #22	SEC16A (ENSEASG00005018427) #23	INPP5E (ENSEASG00005018418) #24	PMPCA (ENSEASG00005018411) #25	ENTR1 (ENSEASG00005018403) #26	SNAPC4 (ENSEASG00005018397) #27	CARD9 (ENSEASG00005018392) #28	GPSM1 (ENSEASG00005018385) #30	CCDC187 (ENSEASG00005018375)	QSOX2 (ENSEASG00005018337) #33	LHX3 (ENSEASG00005018318) #34	TMEM250 (ENSEASG00005038060) #35	NACC2 (ENSEASG00005018311) #36	UBAC1 (ENSEASG00005018309) #37	CAMSAP1 (ENSEASG00005018242)	KCNT1 (ENSEASG00005017622)
Chiroptera	ANCESTRAL SPECIES	8	ENSGT00940000159718	ENSGT01100000266551	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000164320	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Megabat	MODERN SPECIES	1692																NOTCH1 (ENSPVAG00000001360) #22	ENSPVAG00000001356	SEC16A (ENSPVAG00000001353) #23	INPP5E (ENSPVAG00000001351) #24	PMPCA (ENSPVAG00000001350) #25	ENTR1 (ENSPVAG00000001348) #26	SNAPC4 (ENSPVAG00000001344) #27	CARD9 (ENSPVAG00000001342) #28	ENSPVAG00000001341 #29	GPSM1 (ENSPVAG00000001337) #30
Microchiroptera	ANCESTRAL SPECIES	7	ENSGT00940000159718	ENSGT01100000266551	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000164320	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Microbat	MODERN SPECIES	2240																NOTCH1 (ENSMLUG00000005748) #22	SEC16A (ENSMLUG00000009099) #23
Greater horseshoe bat	MODERN SPECIES	3	VAV2 (ENSRFEG00010016972)	ENSRFEG00010017100	BRD3 (ENSRFEG00010017126)	WDR5 (ENSRFEG00010017171)	RXRA (ENSRFEG00010017245)	COL5A1 (ENSRFEG00010017359)	FCN2 (ENSRFEG00010017458)	FCN1 (ENSRFEG00010017568)	OLFM1 (ENSRFEG00010017662)	PPP1R26 (ENSRFEG00010017804)	ENSRFEG00010017815	MRPS2 (ENSRFEG00010017857)	DIPK1B (ENSRFEG00010017916) #19	AGPAT2 (ENSRFEG00010017940) #20	EGFL7 (ENSRFEG00010017996) #21	NOTCH1 (ENSRFEG00010018099) #22	SEC16A (ENSRFEG00010018245) #23	INPP5E (ENSRFEG00010019803) #24	PMPCA (ENSRFEG00010019835) #25	ENSRFEG00010019890 #26	SNAPC4 (ENSRFEG00010019951) #27	CARD9 (ENSRFEG00010020007) #28	DNLZ (ENSRFEG00010020087) #29	GPSM1 (ENSRFEG00010020133) #30	ENSRFEG00010020285	ENSRFEG00010020365 #33	LHX3 (ENSRFEG00010020399) #34	TMEM250 (ENSRFEG00010020471) #35	NACC2 (ENSRFEG00010020485) #36	UBAC1 (ENSRFEG00010020506) #37	CAMSAP1 (ENSRFEG00010020547)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157157.b #22
Hedgehog	MODERN SPECIES	4471																NOTCH1 (ENSEEUG00000012153) #22
Common shrew	MODERN SPECIES	3421																ENSSARG00000001648 #22
Atlantogenata	ANCESTRAL SPECIES	97	ENSGT00390000000529 #7	ENSGT00940000158379 #8	ENSGT00940000159607 #9	ENSGT00390000018038	ENSGT00530000064123 #11	ENSGT00390000016800 #12	ENSGT00530000064194 #13	ENSGT00940000155193.a.a #15	ENSGT00940000153294.m.a	ENSGT00390000004339 #16	ENSGT00390000006980 #17	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00530000065015	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Afrotheria	ANCESTRAL SPECIES	199						ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22
Tenrec	MODERN SPECIES	4319																ENSETEG00000011395 #22
Afrotheria_a	ANCESTRAL SPECIES	198						ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22
Elephant	MODERN SPECIES	138							ENSLAFG00000009931	ENSLAFG00000031547	ENSLAFG00000030528	OLFM1 (ENSLAFG00000016866)	ENSLAFG00000029433	PIERCE1 (ENSLAFG00000029858)	MRPS2 (ENSLAFG00000023206)	AGPAT2 (ENSLAFG00000022707) #20	EGFL7 (ENSLAFG00000025873) #21	ENSLAFG00000022253 #22
Hyrax	MODERN SPECIES	3613																NOTCH1 (ENSPCAG00000008013) #22
Xenarthra	ANCESTRAL SPECIES	1032																ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26
Armadillo	MODERN SPECIES	1747																NOTCH1 (ENSDNOG00000014374) #22	SEC16A (ENSDNOG00000047209) #23	ENSDNOG00000041303	INPP5E (ENSDNOG00000007074) #24	PMPCA (ENSDNOG00000036519) #25	ENTR1 (ENSDNOG00000014677) #26
Marsupialia	ANCESTRAL SPECIES	18	ENSGT00940000157589	ENSGT00940000159718	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.f.c.a	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00970000198057 #31	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Opossum	MODERN SPECIES		ENSMODG00000029665	BRD3OS (ENSMODG00000047757)	BRD3 (ENSMODG00000013121)	ENSMODG00000039911	ENSMODG00000013131	RXRA (ENSMODG00000013136)	COL5A1 (ENSMODG00000013206)	ENSMODG00000013212	OLFM1 (ENSMODG00000013220)	ENSMODG00000017610	PIERCE1 (ENSMODG00000023305)	MRPS2 (ENSMODG00000049197)	DIPK1B (ENSMODG00000017604) #19	AGPAT2 (ENSMODG00000017601) #20	EGFL7 (ENSMODG00000017598) #21	NOTCH1 (ENSMODG00000017591) #22	SEC16A (ENSMODG00000017583) #23	INPP5E (ENSMODG00000017574) #24	PMPCA (ENSMODG00000017572) #25	ENSMODG00000017568 #26	ENSMODG00000017566 #27	ENSMODG00000017562 #28	ENSMODG00000017560 #29	ENSMODG00000039302 #30	ENSMODG00000050735 #30	ENSMODG00000038220 #31	QSOX2 (ENSMODG00000017555) #33	LHX3 (ENSMODG00000017549) #34	TMEM250 (ENSMODG00000043203) #35	NACC2 (ENSMODG00000017546) #36	UBAC1 (ENSMODG00000017540) #37
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000157589	ENSGT00940000159718	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.f.c.a	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00970000198057 #31	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000157589	ENSGT00940000159718	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.f.c.a	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00970000198057 #31	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000157589	ENSGT00940000159718	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.f.c.a	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #19	ENSGT00390000008726.h.a #20	ENSGT00940000160015 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #23	ENSGT00940000158199 #24	ENSGT00940000156724 #25	ENSGT00390000000560 #26	ENSGT00940000160404 #27	ENSGT00940000160570 #28	ENSGT00390000008220 #29	ENSGT00940000154667.a #30	ENSGT00970000198057 #31	ENSGT00940000159734 #33	ENSGT00940000160316 #34	ENSGT00560000078707 #35	ENSGT00940000159244 #36	ENSGT00390000014658 #37	ENSGT00950000182975.a.a.b
Common wonbat	MODERN SPECIES	1030	DBH (ENSVURG00010012023)	SARDH (ENSVURG00010010680)	VAV2 (ENSVURG00010007291)	ENSVURG00010007182	BRD3OS (ENSVURG00010007179)	BRD3 (ENSVURG00010007166)	ENSVURG00010007153	RXRA (ENSVURG00010007139)	ENSVURG00010007096	OLFM1 (ENSVURG00010007068)	PIERCE1 (ENSVURG00010007054)	MRPS2 (ENSVURG00010007050)	DIPK1B (ENSVURG00010007015) #19	AGPAT2 (ENSVURG00010007005) #20	EGFL7 (ENSVURG00010006989) #21	NOTCH1 (ENSVURG00010006963) #22	SEC16A (ENSVURG00010006894) #23	INPP5E (ENSVURG00010006875) #24	PMPCA (ENSVURG00010006867) #25	ENTR1 (ENSVURG00010006861) #26	ENSVURG00010006845 #27	CARD9 (ENSVURG00010006823) #28	DNLZ (ENSVURG00010006809) #29	GPSM1 (ENSVURG00010006793) #30	QSOX2 (ENSVURG00010006739) #33	LHX3 (ENSVURG00010006715) #34	TMEM250 (ENSVURG00010006706) #35	NACC2 (ENSVURG00010006696) #36	UBAC1 (ENSVURG00010006680) #37	CAMSAP1 (ENSVURG00010006656)	ENSVURG00010006640
koala	MODERN SPECIES	11	SARDH (ENSPCIG00000017392)	VAV2 (ENSPCIG00000017397)	BRD3OS (ENSPCIG00000035436)	BRD3 (ENSPCIG00000003877)	ENSPCIG00000003893	RXRA (ENSPCIG00000003937)	COL5A1 (ENSPCIG00000018809)	FCN1 (ENSPCIG00000018798)	OLFM1 (ENSPCIG00000013143)	ENSPCIG00000019523	PIERCE1 (ENSPCIG00000019524)	MRPS2 (ENSPCIG00000019526)	DIPK1B (ENSPCIG00000019537) #19	AGPAT2 (ENSPCIG00000019541) #20	EGFL7 (ENSPCIG00000019543) #21	NOTCH1 (ENSPCIG00000019548) #22	SEC16A (ENSPCIG00000019553) #23	INPP5E (ENSPCIG00000019557) #24	PMPCA (ENSPCIG00000005138) #25	ENTR1 (ENSPCIG00000005134) #26	ENSPCIG00000005109 #27	CARD9 (ENSPCIG00000005076) #28	DNLZ (ENSPCIG00000005062) #29	GPSM1 (ENSPCIG00000005041) #30	ENSPCIG00000004981 #31	QSOX2 (ENSPCIG00000004967) #33	LHX3 (ENSPCIG00000004932) #34	TMEM250 (ENSPCIG00000004918) #35	NACC2 (ENSPCIG00000004901) #36	UBAC1 (ENSPCIG00000004863) #37	CAMSAP1 (ENSPCIG00000010728)
Wallaby	MODERN SPECIES	5521																ENSMEUG00000010382 #22
Tasmanian devil	MODERN SPECIES	1	SARDH (ENSSHAG00000009720)	VAV2 (ENSSHAG00000010676)	BRD3 (ENSSHAG00000013594)	ENSSHAG00000013955	RXRA (ENSSHAG00000027189)	ENSSHAG00000032137	COL5A1 (ENSSHAG00000016990)	ENSSHAG00000017399	OLFM1 (ENSSHAG00000017758)	ENSSHAG00000025592	PIERCE1 (ENSSHAG00000022813)	ENSSHAG00000018437	ENSSHAG00000018467 #19	AGPAT2 (ENSSHAG00000001932) #20	EGFL7 (ENSSHAG00000000194) #21	NOTCH1 (ENSSHAG00000004931) #22	INPP5E (ENSSHAG00000006287) #24	SEC16A (ENSSHAG00000030073) #23	ENSSHAG00000007346 #25	ENSSHAG00000024780 #27	ENTR1 (ENSSHAG00000007540) #26	CARD9 (ENSSHAG00000008199) #28	DNLZ (ENSSHAG00000020982) #29	GPSM1 (ENSSHAG00000008958) #30	ENSSHAG00000029030	QSOX2 (ENSSHAG00000030872) #33	LHX3 (ENSSHAG00000011489) #34	TMEM250 (ENSSHAG00000026159) #35	NACC2 (ENSSHAG00000029658) #36	UBAC1 (ENSSHAG00000014335) #37	CAMSAP1 (ENSSHAG00000001238)