Mammalia	ANCESTRAL SPECIES	23	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.f	ENSGT00940000162790.b	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00970000198057	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Theria	ANCESTRAL SPECIES	23	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000156959.A	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00970000198057	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Eutheria	ANCESTRAL SPECIES	7	ENSGT00940000159718	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT01030000236295	ENSGT00940000159211.C	ENSGT00940000164320	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.a.a ##14	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Primates	ANCESTRAL SPECIES	9	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00910000147521	ENSGT00940000159211.C	ENSGT00940000164320	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00910000147521	ENSGT00940000159211.C	ENSGT00940000164320	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00940000156621	ENSGT00390000008519.x #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00910000146998 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000068668 #32	ENSGT00530000065015 #33	ENSGT00770000121771 #34	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00910000147142
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00940000162046 #8	ENSGT00390000002738.a.i.b ##9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00910000146998 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000068668 #32	ENSGT00530000065015 #33	ENSGT00770000121771 #34	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00910000147142
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00940000162046 #8	ENSGT00390000002738.a.i.b ##9	ENSGT00390000002738.a.j #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00910000146998 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000068668 #32	ENSGT00530000065015 #33	ENSGT00770000121771 #34	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00910000147142
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000162046 #8	ENSGT00390000002738.a.i.b ##9	ENSGT00390000002738.a.j #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00910000146998 #21	ENSGT00940000157157.b #22	ENSGT00910000147994 #23	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000068668 #32	ENSGT00530000065015 #33	ENSGT00770000121771 #34	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37
Macaca	ANCESTRAL SPECIES	10	ENSGT00390000008519.x #7	ENSGT00940000162046 #8	ENSGT00390000002738.a.j #9	ENSGT00390000016543 #10	ENSGT00390000016002.c #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00910000146998 #21	ENSGT00940000157157.b #22	ENSGT00910000147994 #23	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000068668 #32	ENSGT00530000065015 #33	ENSGT00770000121771 #34	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37
Pig-tailed macaque	MODERN SPECIES	490	EDF1 (ENSMNEG00000036130) #7	MAMDC4 (ENSMNEG00000033930) #8	PHPT1 (ENSMNEG00000031171) #9	AJM1 (ENSMNEG00000024181) #10	RABL6 (ENSMNEG00000037443) #11	CCDC183 (ENSMNEG00000036029) #12	TMEM141 (ENSMNEG00000042354) #13	LCN15 (ENSMNEG00000033282) #14	LCN8 (ENSMNEG00000031815) #15	LCN6 (ENSMNEG00000045223) #16	LCN10 (ENSMNEG00000040647) #17	DIPK1B (ENSMNEG00000045182) #18	AGPAT2 (ENSMNEG00000028259) #19	EGFL7 (ENSMNEG00000029858) #20	ENSMNEG00000038585 #21	NOTCH1 (ENSMNEG00000030577) #22	ENSMNEG00000024709 #23	SEC16A (ENSMNEG00000045097) #24	INPP5E (ENSMNEG00000031118) #25	PMPCA (ENSMNEG00000036908) #26	ENSMNEG00000033991 #27	SNAPC4 (ENSMNEG00000044910) #28	CARD9 (ENSMNEG00000030791) #29	DNLZ (ENSMNEG00000030241) #30	GPSM1 (ENSMNEG00000041757) #31	ENSMNEG00000034539 #32	CCDC187 (ENSMNEG00000036363) #33	ENSMNEG00000037428 #34	QSOX2 (ENSMNEG00000044842) #35	LHX3 (ENSMNEG00000039375) #36	TMEM250 (ENSMNEG00000008993) #37
Macaca_a	ANCESTRAL SPECIES	10	ENSGT00940000162046 #8	ENSGT00390000002738.a.i.a ##9	ENSGT00390000002738.a.j #9	ENSGT00390000016543 #10	ENSGT00390000016002.c #11	ENSGT00940000163544 #12	ENSGT00520000060469	ENSGT00940000166898.a.a.b.b.a.a.b.b.a.a	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00910000147994 #23	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658
Rhesus	MODERN SPECIES	6	EDF1 (ENSMMUG00000005051) #7	PHPT1 (ENSMMUG00000005047) #9	AJM1 (ENSMMUG00000005046) #10	RABL6 (ENSMMUG00000005042) #11	CCDC183 (ENSMMUG00000005040) #12	ENSMMUG00000048231	ENSMMUG00000057327	LCN15 (ENSMMUG00000004815) #14	LCN8 (ENSMMUG00000001834) #15	LCN6 (ENSMMUG00000018754) #16	LCN10 (ENSMMUG00000018753) #17	DIPK1B (ENSMMUG00000049689) #18	AGPAT2 (ENSMMUG00000020990) #19	EGFL7 (ENSMMUG00000026981) #20	ENSMMUG00000056009	NOTCH1 (ENSMMUG00000017022) #22	ENSMMUG00000041459 #23	SEC16A (ENSMMUG00000003106) #24	INPP5E (ENSMMUG00000003105) #25	PMPCA (ENSMMUG00000003098) #26	ENTR1 (ENSMMUG00000003089) #27	SNAPC4 (ENSMMUG00000003086) #28	CARD9 (ENSMMUG00000003084) #29	DNLZ (ENSMMUG00000003083) #30	GPSM1 (ENSMMUG00000003081) #31	CCDC187 (ENSMMUG00000001409) #33	QSOX2 (ENSMMUG00000004885) #35	LHX3 (ENSMMUG00000004882) #36	TMEM250 (ENSMMUG00000041988) #37	NACC2 (ENSMMUG00000000276)	UBAC1 (ENSMMUG00000016827)
Crab-eating macaque	MODERN SPECIES	6	PHPT1 (ENSMFAG00000000240) ##9	ENSMFAG00000043136 #11	ENSMFAG00000056778 ##11	ENSMFAG00000065092	CCDC183 (ENSMFAG00000007280) #12	TMEM141 (ENSMFAG00000030006) #13	ENSMFAG00000053599	LCN15 (ENSMFAG00000031073) #14	LCN8 (ENSMFAG00000039801) #15	ENSMFAG00000062656	ENSMFAG00000059899	LCN10 (ENSMFAG00000000089) #17	DIPK1B (ENSMFAG00000045811) #18	AGPAT2 (ENSMFAG00000034214) #19	EGFL7 (ENSMFAG00000043021) #20	NOTCH1 (ENSMFAG00000000688) #22	SEC16A (ENSMFAG00000031567) #24	INPP5E (ENSMFAG00000002592) #25	PMPCA (ENSMFAG00000001884) #26	ENTR1 (ENSMFAG00000040249) #27	SNAPC4 (ENSMFAG00000003913) #28	CARD9 (ENSMFAG00000040508) #29	DNLZ (ENSMFAG00000045519) #30	GPSM1 (ENSMFAG00000040736) #31	CCDC187 (ENSMFAG00000043161) #33	QSOX2 (ENSMFAG00000000173) #35	LHX3 (ENSMFAG00000042900) #36	NACC2 (ENSMFAG00000052501)	CAMSAP1 (ENSMFAG00000001245)	ENSMFAG00000043740	ENSMFAG00000048033
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00390000008519.x #7	ENSGT00940000162046 #8	ENSGT00390000002738.a.i.b ##9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00910000146998 #21	ENSGT00940000157157.b #22	ENSGT00910000147994 #23	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000068668 #32	ENSGT00530000065015 #33	ENSGT00940000159734.c.b #35	ENSGT00770000121771 #34	ENSGT00940000159734.d #35	ENSGT00940000159734.c.a #35
Olive baboon	MODERN SPECIES	4	SLC34A3 (ENSPANG00000026343)	TUBB4B (ENSPANG00000016083)	FAM166A (ENSPANG00000026341)	STPG3 (ENSPANG00000026340)	NELFB (ENSPANG00000026339)	TOR4A (ENSPANG00000039581)	ENSPANG00000026338	NOXA1 (ENSPANG00000026337)	ENTPD8 (ENSPANG00000026431)	NSMF (ENSPANG00000026434)	PNPLA7 (ENSPANG00000026436)	ENSPANG00000044405	ENSPANG00000041760	AGPAT2 (ENSPANG00000026127) #19	EGFL7 (ENSPANG00000026128) #20	NOTCH1 (ENSPANG00000026129) #22	ENSPANG00000034369 #23	SEC16A (ENSPANG00000026131) #24	INPP5E (ENSPANG00000026132) #25	PMPCA (ENSPANG00000026133) #26	ENTR1 (ENSPANG00000026134) #27	SNAPC4 (ENSPANG00000026126) #28	CARD9 (ENSPANG00000026125) #29	DNLZ (ENSPANG00000026117) #30	GPSM1 (ENSPANG00000026118) #31	ENSPANG00000026119 #33	ENSPANG00000026121 #35	ENSPANG00000026122 #36	NACC2 (ENSPANG00000026123)	UBAC1 (ENSPANG00000026124)	CAMSAP1 (ENSPANG00000026116)
Cercopithecinae_d	ANCESTRAL SPECIES	59	ENSGT00940000162046 #8	ENSGT00390000002738.a.i.b ##9	ENSGT00390000002738.a.j #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00910000146998 #21	ENSGT00940000157157.b #22	ENSGT00910000147994 #23	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000068668 #32	ENSGT00530000065015 #33	ENSGT00940000159734.c.a #35	ENSGT00770000121771 #34	ENSGT00940000159734.d #35	ENSGT00940000160316 #36
Drill	MODERN SPECIES	918	FBXW5 (ENSMLEG00000003995)	TRAF2 (ENSMLEG00000042841)	ENSMLEG00000042767 #7	MAMDC4 (ENSMLEG00000030129) #8	PHPT1 (ENSMLEG00000029203) ##9	RABL6 (ENSMLEG00000040336) #11	CCDC183 (ENSMLEG00000043113) #12	TMEM141 (ENSMLEG00000040334) #13	LCN15 (ENSMLEG00000037585) #14	LCN8 (ENSMLEG00000043520) #15	LCN6 (ENSMLEG00000034192) #16	LCN10 (ENSMLEG00000044396) #17	DIPK1B (ENSMLEG00000039274) #18	AGPAT2 (ENSMLEG00000043155) #19	EGFL7 (ENSMLEG00000043778) #20	NOTCH1 (ENSMLEG00000034471) #22	ENSMLEG00000026497 #23	SEC16A (ENSMLEG00000033444) #24	INPP5E (ENSMLEG00000025068) #25	PMPCA (ENSMLEG00000004482) #26	ENTR1 (ENSMLEG00000035605) #27	SNAPC4 (ENSMLEG00000044397) #28	CARD9 (ENSMLEG00000028795) #29	ENSMLEG00000042411	GPSM1 (ENSMLEG00000030322) #31	ENSMLEG00000029890 #32	CCDC187 (ENSMLEG00000039793) #33	ENSMLEG00000039835 #34	QSOX2 (ENSMLEG00000043018) #35	LHX3 (ENSMLEG00000035269) #36	ENSMLEG00000040343
Sooty mangabey	MODERN SPECIES	572	EDF1 (ENSCATG00000040060) #7	MAMDC4 (ENSCATG00000029861) #8	PHPT1 (ENSCATG00000029586) #9	AJM1 (ENSCATG00000020813) #10	RABL6 (ENSCATG00000033696) #11	CCDC183 (ENSCATG00000018773) #12	TMEM141 (ENSCATG00000041045) #13	LCN15 (ENSCATG00000030121) #14	LCN8 (ENSCATG00000042952) #15	LCN6 (ENSCATG00000044431) #16	LCN10 (ENSCATG00000010025) #17	DIPK1B (ENSCATG00000039388) #18	AGPAT2 (ENSCATG00000040193) #19	EGFL7 (ENSCATG00000034425) #20	ENSCATG00000029926 #21	NOTCH1 (ENSCATG00000023195) #22	ENSCATG00000022791 #23	SEC16A (ENSCATG00000034091) #24	INPP5E (ENSCATG00000035208) #25	PMPCA (ENSCATG00000013587) #26	ENTR1 (ENSCATG00000042171) #27	SNAPC4 (ENSCATG00000038668) #28	CARD9 (ENSCATG00000045318) #29	DNLZ (ENSCATG00000036691) #30	GPSM1 (ENSCATG00000040442) #31	ENSCATG00000029653 #32	CCDC187 (ENSCATG00000045121) #33	QSOX2 (ENSCATG00000042911) #35	LHX3 (ENSCATG00000044772) #36	TMEM250 (ENSCATG00000014661) #37	ENSCATG00000045346
Vervet Monkey	MODERN SPECIES	3	TRAF2 (ENSCSAG00000016084)	EDF1 (ENSCSAG00000016077) #7	MAMDC4 (ENSCSAG00000016066) #8	PHPT1 (ENSCSAG00000016037) ##9	AJM1 (ENSCSAG00000019684) #10	RABL6 (ENSCSAG00000015993) #11	ENSCSAG00000015946 ##13	TMEM141 (ENSCSAG00000015926) #13	LCN15 (ENSCSAG00000015917) #14	LCN8 (ENSCSAG00000015909) #15	LCN6 (ENSCSAG00000015897) #16	LCN10 (ENSCSAG00000015892) #17	DIPK1B (ENSCSAG00000015886) #18	AGPAT2 (ENSCSAG00000015884) #19	ENSCSAG00000015882 #20	NOTCH1 (ENSCSAG00000015874) #22	SEC16A (ENSCSAG00000015852) #24	INPP5E (ENSCSAG00000015816) #25	PMPCA (ENSCSAG00000015811) #26	ENTR1 (ENSCSAG00000015805) #27	SNAPC4 (ENSCSAG00000015779) #28	CARD9 (ENSCSAG00000015768) #29	DNLZ (ENSCSAG00000015762) #30	GPSM1 (ENSCSAG00000015757) #31	ENSCSAG00000015751	QSOX2 (ENSCSAG00000015745) #35	LHX3 (ENSCSAG00000015739) #36	TMEM250 (ENSCSAG00000019685) #37	NACC2 (ENSCSAG00000015727)	UBAC1 (ENSCSAG00000015725)	CAMSAP1 (ENSCSAG00000015719)
Rhinopithecus	ANCESTRAL SPECIES	2	ENSGT00940000162046 #8	ENSGT00390000002738.a.i.b ##9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00910000146998 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00910000147510	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00770000121771 #34	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244
Golden snub-nosed monkey	MODERN SPECIES	1695	TRAF2 (ENSRROG00000033044)	EDF1 (ENSRROG00000036689) #7	MAMDC4 (ENSRROG00000028994) #8	ENSRROG00000011056 ##9	RABL6 (ENSRROG00000043877) #11	CCDC183 (ENSRROG00000016750) #12	TMEM141 (ENSRROG00000035499) #13	LCN15 (ENSRROG00000034391) #14	LCN8 (ENSRROG00000020669) #15	LCN6 (ENSRROG00000032208) #16	LCN10 (ENSRROG00000033133) #17	DIPK1B (ENSRROG00000030531) #18	AGPAT2 (ENSRROG00000037674) #19	EGFL7 (ENSRROG00000042806) #20	ENSRROG00000034873 #21	NOTCH1 (ENSRROG00000043680) #22	SEC16A (ENSRROG00000043913) #24	INPP5E (ENSRROG00000034624) #25	PMPCA (ENSRROG00000038079) #26	ENTR1 (ENSRROG00000042367) #27	SNAPC4 (ENSRROG00000037831) #28	CARD9 (ENSRROG00000037500) #29	DNLZ (ENSRROG00000030185) #30	GPSM1 (ENSRROG00000029765) #31	ENSRROG00000022335	CCDC187 (ENSRROG00000030970) #33	ENSRROG00000039951 #34	QSOX2 (ENSRROG00000000133) #35	LHX3 (ENSRROG00000040705) #36	TMEM250 (ENSRROG00000014064) #37	NACC2 (ENSRROG00000041819)
Black snub-nosed monkey	MODERN SPECIES	1117	MAMDC4 (ENSRBIG00000038570) #8	ENSRBIG00000031349 ##9	AJM1 (ENSRBIG00000034110) #10	RABL6 (ENSRBIG00000035338) #11	CCDC183 (ENSRBIG00000037153) #12	TMEM141 (ENSRBIG00000037126) #13	ENSRBIG00000043462	LCN15 (ENSRBIG00000030731) #14	LCN8 (ENSRBIG00000041569) #15	LCN6 (ENSRBIG00000029873) #16	LCN10 (ENSRBIG00000035808) #17	DIPK1B (ENSRBIG00000042481) #18	AGPAT2 (ENSRBIG00000033419) #19	EGFL7 (ENSRBIG00000032261) #20	ENSRBIG00000013588 #21	NOTCH1 (ENSRBIG00000035080) #22	SEC16A (ENSRBIG00000032839) #24	INPP5E (ENSRBIG00000028441) #25	PMPCA (ENSRBIG00000031926) #26	ENTR1 (ENSRBIG00000039999) #27	SNAPC4 (ENSRBIG00000017249) #28	CARD9 (ENSRBIG00000028861) #29	DNLZ (ENSRBIG00000035500) #30	GPSM1 (ENSRBIG00000025573) #31	ENSRBIG00000038310	CCDC187 (ENSRBIG00000034057) #33	ENSRBIG00000043062 #34	QSOX2 (ENSRBIG00000033847) #35	LHX3 (ENSRBIG00000041290) #36	TMEM250 (ENSRBIG00000029884) #37	NACC2 (ENSRBIG00000035502)
Hominoidea	ANCESTRAL SPECIES	19	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00910000146998 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724.a #26	ENSGT00390000000560.t #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000068668 #32	ENSGT00530000065015 #33	ENSGT00770000121771 #34	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00980000202250	ENSGT00560000078707 #37
Hominidae	ANCESTRAL SPECIES	10	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00910000146998 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724.a #26	ENSGT00390000000560.t #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000068668 #32	ENSGT00530000065015 #33	ENSGT00770000121771 #34	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00980000202250	ENSGT00560000078707 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00910000146998 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724.a #26	ENSGT00390000000560.t #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000068668 #32	ENSGT00530000065015.c #33	ENSGT00770000121771 #34	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00980000202250	ENSGT00560000078707 #37
Homo/Pan group	ANCESTRAL SPECIES	16	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00910000146998 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724.a #26	ENSGT00390000000560.t #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000068668 #32	ENSGT00530000065015.c #33	ENSGT00770000121771 #34	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00980000202250	ENSGT00560000078707 #37
Pan	ANCESTRAL SPECIES	18	ENSGT00940000156621	ENSGT00390000008519.x #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT00940000154399.a.b.j.b	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00910000146998 #21	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724.a #26	ENSGT00390000000560.t #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000068668 #32	ENSGT00530000065015.c #33	ENSGT00770000121771 #34	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00980000202250	ENSGT00560000078707 #37
Bonobo	MODERN SPECIES	22	FBXW5 (ENSPPAG00000030876)	TRAF2 (ENSPPAG00000002032)	EDF1 (ENSPPAG00000028843) #7	MAMDC4 (ENSPPAG00000037333) #8	ENSPPAG00000042861 #9	RABL6 (ENSPPAG00000042288) #11	CCDC183 (ENSPPAG00000034695) #12	ENSPPAG00000035174 #13	ENSPPAG00000031648	LCN15 (ENSPPAG00000028560) #14	ENSPPAG00000036649 #15	DIPK1B (ENSPPAG00000034515) #18	AGPAT2 (ENSPPAG00000039632) #19	EGFL7 (ENSPPAG00000038586) #20	ENSPPAG00000037854 #21	NOTCH1 (ENSPPAG00000039565) #22	SEC16A (ENSPPAG00000041065) #24	INPP5E (ENSPPAG00000040054) #25	PMPCA (ENSPPAG00000037773) #26	ENTR1 (ENSPPAG00000027715) #27	SNAPC4 (ENSPPAG00000036391) #28	CARD9 (ENSPPAG00000038103) #29	ENSPPAG00000035373 #30	GPSM1 (ENSPPAG00000041759) #31	ENSPPAG00000023573 #32	CCDC187 (ENSPPAG00000012976) #33	ENSPPAG00000024982 #34	QSOX2 (ENSPPAG00000037446) #35	LHX3 (ENSPPAG00000031746) #36	TMEM250 (ENSPPAG00000027749) #37	ENSPPAG00000024872
Chimpanzee	MODERN SPECIES	22	TRAF2 (ENSPTRG00000021578)	EDF1 (ENSPTRG00000021577) #7	MAMDC4 (ENSPTRG00000021576) #8	PHPT1 (ENSPTRG00000028987) #9	AJM1 (ENSPTRG00000047869) #10	RABL6 (ENSPTRG00000034484) #11	CCDC183 (ENSPTRG00000021573) #12	TMEM141 (ENSPTRG00000040757) #13	ENSPTRG00000046756	LCN15 (ENSPTRG00000021569) #14	LCN8 (ENSPTRG00000021568) #15	DIPK1B (ENSPTRG00000021565) #18	AGPAT2 (ENSPTRG00000021564) #19	EGFL7 (ENSPTRG00000021563) #20	ENSPTRG00000042787 #21	NOTCH1 (ENSPTRG00000021561) #22	SEC16A (ENSPTRG00000050333) #24	INPP5E (ENSPTRG00000021557) #25	PMPCA (ENSPTRG00000021556) #26	ENTR1 (ENSPTRG00000021555) #27	SNAPC4 (ENSPTRG00000021554) #28	CARD9 (ENSPTRG00000021551) #29	DNLZ (ENSPTRG00000034113) #30	GPSM1 (ENSPTRG00000021549) #31	ENSPTRG00000042394 #32	CCDC187 (ENSPTRG00000041847) #33	ENSPTRG00000043043 #34	QSOX2 (ENSPTRG00000021547) #35	LHX3 (ENSPTRG00000021546) #36	ENSPTRG00000052548	TMEM250 (ENSPTRG00000045356) #37
Human	MODERN SPECIES	21	TRAF2 (ENSG00000127191)	EDF1 (ENSG00000107223) #7	MAMDC4 (ENSG00000177943) #8	PHPT1 (ENSG00000054148) #9	AJM1 (ENSG00000232434) #10	RABL6 (ENSG00000196642) #11	CCDC183 (ENSG00000213213) #12	TMEM141 (ENSG00000244187) #13	LCN15 (ENSG00000177984) #14	LCN8 (ENSG00000204001) #15	LCN6 (ENSG00000267206) #16	LCN10 (ENSG00000187922) #17	DIPK1B (ENSG00000165716) #18	AGPAT2 (ENSG00000169692) #19	EGFL7 (ENSG00000172889) #20	NOTCH1 (ENSG00000148400) #22	SEC16A (ENSG00000148396) #24	INPP5E (ENSG00000148384) #25	PMPCA (ENSG00000165688) #26	ENTR1 (ENSG00000165689) #27	SNAPC4 (ENSG00000165684) #28	CARD9 (ENSG00000187796) #29	DNLZ (ENSG00000213221) #30	GPSM1 (ENSG00000160360) #31	CCDC187 (ENSG00000260220) #33	QSOX2 (ENSG00000165661) #35	LHX3 (ENSG00000107187) #36	TMEM250 (ENSG00000238227) #37	NACC2 (ENSG00000148411)	UBAC1 (ENSG00000130560)	CAMSAP1 (ENSG00000130559)
Gorilla	MODERN SPECIES	22	TRAF2 (ENSGGOG00000007150)	EDF1 (ENSGGOG00000014750) #7	MAMDC4 (ENSGGOG00000034827) #8	PHPT1 (ENSGGOG00000014734) #9	AJM1 (ENSGGOG00000023762) #10	RABL6 (ENSGGOG00000014721) #11	CCDC183 (ENSGGOG00000014712) #12	ENSGGOG00000014707 #13	LCN15 (ENSGGOG00000015034) #14	ENSGGOG00000037615 #15	ENSGGOG00000000037 #16	DIPK1B (ENSGGOG00000016071) #18	AGPAT2 (ENSGGOG00000016829) #19	EGFL7 (ENSGGOG00000016820) #20	ENSGGOG00000041839 #21	ENSGGOG00000009937 #22	SEC16A (ENSGGOG00000010933) #24	INPP5E (ENSGGOG00000010924) #25	PMPCA (ENSGGOG00000010912) #26	ENTR1 (ENSGGOG00000010905) #27	SNAPC4 (ENSGGOG00000010887) #28	CARD9 (ENSGGOG00000010874) #29	ENSGGOG00000010871 #30	GPSM1 (ENSGGOG00000010856) #31	ENSGGOG00000023915 #32	ENSGGOG00000037242 #33	ENSGGOG00000024330 #34	QSOX2 (ENSGGOG00000014107) #35	LHX3 (ENSGGOG00000014099) #36	ENSGGOG00000043190	ENSGGOG00000038791
Orangutan	MODERN SPECIES	22	C8G (ENSPPYG00000019792)	TRAF2 (ENSPPYG00000019790)	ENSPPYG00000019789 #7	PHPT1 (ENSPPYG00000019787) #9	AJM1 (ENSPPYG00000032469) #10	ENSPPYG00000019786 #11	CCDC183 (ENSPPYG00000040256) #12	ENSPPYG00000039306	ENSPPYG00000038232 #14	LCN8 (ENSPPYG00000019785) #15	LCN6 (ENSPPYG00000019783) #16	LCN10 (ENSPPYG00000019782) #17	DIPK1B (ENSPPYG00000034533) #18	AGPAT2 (ENSPPYG00000019780) #19	EGFL7 (ENSPPYG00000019779) #20	NOTCH1 (ENSPPYG00000019777) #22	SEC16A (ENSPPYG00000019775) #24	INPP5E (ENSPPYG00000019774) #25	PMPCA (ENSPPYG00000019773) #26	ENTR1 (ENSPPYG00000019772) #27	ENSPPYG00000038823	SNAPC4 (ENSPPYG00000019771) #28	CARD9 (ENSPPYG00000019770) #29	DNLZ (ENSPPYG00000019769) #30	GPSM1 (ENSPPYG00000019768) #31	CCDC187 (ENSPPYG00000038770) #33	QSOX2 (ENSPPYG00000019766) #35	LHX3 (ENSPPYG00000019765) #36	ENSPPYG00000019764	CAMSAP1 (ENSPPYG00000019763)	KCNT1 (ENSPPYG00000029787)
Gibbon	MODERN SPECIES	23	TRAF2 (ENSNLEG00000008615)	EDF1 (ENSNLEG00000008605) #7	MAMDC4 (ENSNLEG00000008540) #8	ENSNLEG00000008535 #10	RABL6 (ENSNLEG00000008449) #11	CCDC183 (ENSNLEG00000008417) #12	ENSNLEG00000008412 #13	ENSNLEG00000008407 #14	ENSNLEG00000008388 #15	LCN6 (ENSNLEG00000008384) #16	LCN10 (ENSNLEG00000008369) #17	ENSNLEG00000008367 #18	AGPAT2 (ENSNLEG00000008362) #19	EGFL7 (ENSNLEG00000008358) #20	ENSNLEG00000030857 #21	NOTCH1 (ENSNLEG00000008342) #22	SEC16A (ENSNLEG00000008283) #24	ENSNLEG00000008277 #25	PMPCA (ENSNLEG00000008214) #26	ENSNLEG00000031363	ENTR1 (ENSNLEG00000008186) #27	SNAPC4 (ENSNLEG00000008175) #28	CARD9 (ENSNLEG00000008156) #29	ENSNLEG00000008154	GPSM1 (ENSNLEG00000008142) #31	ENSNLEG00000008140 #32	ENSNLEG00000008949 #33	ENSNLEG00000008946 #35	ENSNLEG00000008943 #36	ENSNLEG00000034273	TMEM250 (ENSNLEG00000033278) #37
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00940000156621	ENSGT00390000008519.x #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000153116.C.a ##13	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Cebidae	ANCESTRAL SPECIES	7	ENSGT00940000156621	ENSGT00390000008519.x #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Cebidae_a	ANCESTRAL SPECIES	50	ENSGT00940000156621	ENSGT00390000008519.x #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Capuchin	MODERN SPECIES	339	TRAF2 (ENSCCAG00000027650)	EDF1 (ENSCCAG00000020655) #7	MAMDC4 (ENSCCAG00000022947) #8	PHPT1 (ENSCCAG00000021496) #9	AJM1 (ENSCCAG00000032493) #10	RABL6 (ENSCCAG00000000520) #11	CCDC183 (ENSCCAG00000018823) #12	TMEM141 (ENSCCAG00000024758) #13	LCN15 (ENSCCAG00000018305) #14	LCN8 (ENSCCAG00000030933) #15	LCN6 (ENSCCAG00000027811) #16	LCN10 (ENSCCAG00000011020) #17	DIPK1B (ENSCCAG00000034391) #18	AGPAT2 (ENSCCAG00000028504) #19	EGFL7 (ENSCCAG00000023392) #20	NOTCH1 (ENSCCAG00000034699) #22	SEC16A (ENSCCAG00000032922) #24	INPP5E (ENSCCAG00000017723) #25	PMPCA (ENSCCAG00000024313) #26	ENTR1 (ENSCCAG00000011969) #27	SNAPC4 (ENSCCAG00000027922) #28	CARD9 (ENSCCAG00000035142) #29	DNLZ (ENSCCAG00000034397) #30	GPSM1 (ENSCCAG00000023809) #31	CCDC187 (ENSCCAG00000035700) #33	QSOX2 (ENSCCAG00000026034) #35	LHX3 (ENSCCAG00000018930) #36	TMEM250 (ENSCCAG00000007194) #37	NACC2 (ENSCCAG00000033832)	UBAC1 (ENSCCAG00000036044)	CAMSAP1 (ENSCCAG00000029904)
Bolivian squirrel monkey	MODERN SPECIES	186	FBXW5 (ENSSBOG00000033854)	TRAF2 (ENSSBOG00000028404)	EDF1 (ENSSBOG00000021626) #7	MAMDC4 (ENSSBOG00000035516) #8	PHPT1 (ENSSBOG00000029985) #9	RABL6 (ENSSBOG00000021920) #11	ENSSBOG00000034024 ##13	ENSSBOG00000029916	LCN15 (ENSSBOG00000030726) #14	LCN8 (ENSSBOG00000022923) #15	LCN6 (ENSSBOG00000022941) #16	LCN10 (ENSSBOG00000033074) #17	DIPK1B (ENSSBOG00000031677) #18	AGPAT2 (ENSSBOG00000026387) #19	EGFL7 (ENSSBOG00000001778) #20	NOTCH1 (ENSSBOG00000024675) #22	SEC16A (ENSSBOG00000026345) #24	INPP5E (ENSSBOG00000029471) #25	PMPCA (ENSSBOG00000029246) #26	ENTR1 (ENSSBOG00000023035) #27	SNAPC4 (ENSSBOG00000032957) #28	CARD9 (ENSSBOG00000019653) #29	DNLZ (ENSSBOG00000009038) #30	GPSM1 (ENSSBOG00000033524) #31	CCDC187 (ENSSBOG00000029275) #33	QSOX2 (ENSSBOG00000034895) #35	LHX3 (ENSSBOG00000030258) #36	TMEM250 (ENSSBOG00000009150) #37	NACC2 (ENSSBOG00000018782)	UBAC1 (ENSSBOG00000024476)	CAMSAP1 (ENSSBOG00000035271)
Marmoset	MODERN SPECIES		ENSCJAG00000011166 ##7	MAMDC4 (ENSCJAG00000011117) #8	PHPT1 (ENSCJAG00000011097) #9	TRAF2 (ENSCJAG00000011179)	AJM1 (ENSCJAG00000011094) #10	ENSCJAG00000011060	ENSCJAG00000011036 ##13	TMEM141 (ENSCJAG00000033757) #13	LCN15 (ENSCJAG00000067340) #14	LCN8 (ENSCJAG00000011006) #15	LCN6 (ENSCJAG00000010994) #16	LCN10 (ENSCJAG00000010980) #17	DIPK1B (ENSCJAG00000045050) #18	AGPAT2 (ENSCJAG00000010959) #19	ENSCJAG00000010944 #20	NOTCH1 (ENSCJAG00000010922) #22	SEC16A (ENSCJAG00000010865) #24	INPP5E (ENSCJAG00000010776) #25	PMPCA (ENSCJAG00000010849) #26	ENTR1 (ENSCJAG00000010838) #27	SNAPC4 (ENSCJAG00000010725) #28	CARD9 (ENSCJAG00000010809) #29	DNLZ (ENSCJAG00000010789) #30	GPSM1 (ENSCJAG00000010741) #31	CCDC187 (ENSCJAG00000010719) #33	QSOX2 (ENSCJAG00000010708) #35	LHX3 (ENSCJAG00000010692) #36	ENSCJAG00000086642	TMEM250 (ENSCJAG00000041863) #37	NACC2 (ENSCJAG00000010665)	UBAC1 (ENSCJAG00000048208)
Mas night monkey	MODERN SPECIES	540	ENSANAG00000024923	FBXW5 (ENSANAG00000038194)	TRAF2 (ENSANAG00000034527)	EDF1 (ENSANAG00000004851) #7	MAMDC4 (ENSANAG00000028683) #8	PHPT1 (ENSANAG00000034511) #9	AJM1 (ENSANAG00000033633) #10	RABL6 (ENSANAG00000038267) #11	ENSANAG00000038034 ##13	TMEM141 (ENSANAG00000032400) #13	LCN15 (ENSANAG00000036797) #14	ENSANAG00000034333	DIPK1B (ENSANAG00000032828) #18	AGPAT2 (ENSANAG00000032299) #19	EGFL7 (ENSANAG00000028332) #20	NOTCH1 (ENSANAG00000025256) #22	SEC16A (ENSANAG00000034123) #24	INPP5E (ENSANAG00000023059) #25	PMPCA (ENSANAG00000021492) #26	ENTR1 (ENSANAG00000034914) #27	SNAPC4 (ENSANAG00000022824) #28	CARD9 (ENSANAG00000019448) #29	DNLZ (ENSANAG00000036704) #30	GPSM1 (ENSANAG00000035680) #31	CCDC187 (ENSANAG00000031832) #33	QSOX2 (ENSANAG00000022437) #35	LHX3 (ENSANAG00000006890) #36	ENSANAG00000020082 #37	NACC2 (ENSANAG00000031556)	UBAC1 (ENSANAG00000024496)	CAMSAP1 (ENSANAG00000034761)
Tarsier	MODERN SPECIES	2076																NOTCH1 (ENSTSYG00000027103) #22	SEC16A (ENSTSYG00000026997) #24
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00390000000529	ENSGT00940000178229	ENSGT00940000158379.d	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Lemuriformes	ANCESTRAL SPECIES	12	ENSGT00390000000529	ENSGT00940000178229	ENSGT00940000158379.d	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Lemuriformes_a	ANCESTRAL SPECIES	2	ENSGT00390000000529	ENSGT00940000178229	ENSGT00940000158379.d	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Coquerels sifaka	MODERN SPECIES	599																NOTCH1 (ENSPCOG00000013084) #22	SEC16A (ENSPCOG00000024264) #24	INPP5E (ENSPCOG00000015380) #25	PMPCA (ENSPCOG00000022850) #26	ENTR1 (ENSPCOG00000018168) #27	SNAPC4 (ENSPCOG00000023591) #28	CARD9 (ENSPCOG00000028685) #29	DNLZ (ENSPCOG00000015608) #30	GPSM1 (ENSPCOG00000028807) #31	CCDC187 (ENSPCOG00000017104) #33	QSOX2 (ENSPCOG00000027755) #35	LHX3 (ENSPCOG00000020016) #36	NACC2 (ENSPCOG00000010696)	UBAC1 (ENSPCOG00000024301)	CAMSAP1 (ENSPCOG00000026385)	KCNT1 (ENSPCOG00000025697)
Greater bamboo lemur	MODERN SPECIES	1192												ENSPSMG00000015654	DIPK1B (ENSPSMG00000015645) #18	AGPAT2 (ENSPSMG00000015634) #19	EGFL7 (ENSPSMG00000015607) #20	NOTCH1 (ENSPSMG00000015576) #22	SEC16A (ENSPSMG00000015546) #24	INPP5E (ENSPSMG00000015450) #25	PMPCA (ENSPSMG00000015370) #26	ENTR1 (ENSPSMG00000015289) #27	SNAPC4 (ENSPSMG00000015238) #28	CARD9 (ENSPSMG00000015223) #29	DNLZ (ENSPSMG00000015188) #30	GPSM1 (ENSPSMG00000015085) #31	CCDC187 (ENSPSMG00000014972) #33	QSOX2 (ENSPSMG00000014959) #35	LHX3 (ENSPSMG00000014948) #36	TMEM250 (ENSPSMG00000014914) #37	NACC2 (ENSPSMG00000014898)	UBAC1 (ENSPSMG00000014874)	CAMSAP1 (ENSPSMG00000014846)
Mouse lemur	MODERN SPECIES	1	CACFD1 (ENSMICG00000031108)	ENSMICG00000011799	ENSMICG00000047114	REXO4 (ENSMICG00000008422)	STKLD1 (ENSMICG00000008399)	SURF4 (ENSMICG00000037009)	SURF2 (ENSMICG00000007604)	SURF1 (ENSMICG00000007597)	ENSMICG00000036165	MED22 (ENSMICG00000028119)	SURF6 (ENSMICG00000046077)	ABO (ENSMICG00000012209)	DIPK1B (ENSMICG00000015407) #18	AGPAT2 (ENSMICG00000017382) #19	EGFL7 (ENSMICG00000047232) #20	NOTCH1 (ENSMICG00000009527) #22	SEC16A (ENSMICG00000005865) #24	INPP5E (ENSMICG00000005855) #25	PMPCA (ENSMICG00000005847) #26	ENSMICG00000005829 #27	SNAPC4 (ENSMICG00000005804) #28	CARD9 (ENSMICG00000005799) #29	DNLZ (ENSMICG00000027594) #30	GPSM1 (ENSMICG00000033412) #31	ENSMICG00000027003 #33	QSOX2 (ENSMICG00000000188) #35	LHX3 (ENSMICG00000030731) #36	TMEM250 (ENSMICG00000046963) #37	NACC2 (ENSMICG00000047846)	UBAC1 (ENSMICG00000006844)	CAMSAP1 (ENSMICG00000006834)
Bushbaby	MODERN SPECIES	202	ADAMTSL2 (ENSOGAG00000014056)	MYMK (ENSOGAG00000025687)	SLC2A6 (ENSOGAG00000014051)	ENSOGAG00000014043	REXO4 (ENSOGAG00000014040)	STKLD1 (ENSOGAG00000014034)	SURF2 (ENSOGAG00000031360)	ENSOGAG00000024295	ENSOGAG00000014027	MED22 (ENSOGAG00000014026)	SURF6 (ENSOGAG00000027199)	ABO (ENSOGAG00000029319)	DIPK1B (ENSOGAG00000008561) #18	AGPAT2 (ENSOGAG00000025726) #19	EGFL7 (ENSOGAG00000007178) #20	NOTCH1 (ENSOGAG00000015908) #22	SEC16A (ENSOGAG00000015887) #24	INPP5E (ENSOGAG00000015883) #25	ENSOGAG00000024858	ENSOGAG00000007682	PMPCA (ENSOGAG00000015875) #26	ENSOGAG00000015872 #27	SNAPC4 (ENSOGAG00000015861) #28	CARD9 (ENSOGAG00000024499) #29	DNLZ (ENSOGAG00000027386) #30	GPSM1 (ENSOGAG00000029436) #31	ENSOGAG00000031359 #33	QSOX2 (ENSOGAG00000000724) #35	LHX3 (ENSOGAG00000000723) #36	TMEM250 (ENSOGAG00000029423) #37	NACC2 (ENSOGAG00000024802)
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00940000153294.m.a.c.b	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000014818	ENSGT00940000155193.a.a.f	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Glires	ANCESTRAL SPECIES	9	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00940000153294.m.a.c.b	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000014818	ENSGT00940000155193.a.a.f	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Rodentia	ANCESTRAL SPECIES	9	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00940000153294.m.a.c.b	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000014818	ENSGT00940000155193.a.a.f	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000159976	ENSGT00390000000529	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.a.c.b	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00390000000529	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.a.c.b	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##14	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00940000153294.m.a.c.b	ENSGT00530000064194	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##14	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00940000153294.m.a.c.b	ENSGT00530000064194	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##14	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Cricetidae	ANCESTRAL SPECIES	12	ENSGT00390000000529	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.a.c.b	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.b ##14	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00390000000529	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00940000153294.m.a.c.b	ENSGT00530000064194	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.b ##14	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Chinese hamster chok1gshd	MODERN SPECIES	188	Adamts13 (ENSCGRG00001019728)	Rexo4 (ENSCGRG00001013126)	Stkld1 (ENSCGRG00001004554)	Surf4 (ENSCGRG00001023854)	Surf2 (ENSCGRG00001023343)	ENSCGRG00001015263	Surf1 (ENSCGRG00001014570)	Med22 (ENSCGRG00001020945)	ENSCGRG00001020486	ENSCGRG00001001267	ENSCGRG00001024691	ENSCGRG00001018384 ##14	Dipk1b (ENSCGRG00001015260) #18	Agpat2 (ENSCGRG00001014817) #19	Egfl7 (ENSCGRG00001003716) #20	Notch1 (ENSCGRG00001014866) #22	Sec16a (ENSCGRG00001023785) #24	Inpp5e (ENSCGRG00001022064) #25	Pmpca (ENSCGRG00001007411) #26	Entr1 (ENSCGRG00001016737) #27	Snapc4 (ENSCGRG00001015109) #28	Card9 (ENSCGRG00001012284) #29	Dnlz (ENSCGRG00001019566) #30	Gpsm1 (ENSCGRG00001012682) #31	ENSCGRG00001022133 #33	Qsox2 (ENSCGRG00001019767) #35	Lhx3 (ENSCGRG00001019384) #36	Tmem250-ps (ENSCGRG00001007569) #37	Nacc2 (ENSCGRG00001012321)	Ubac1 (ENSCGRG00001020637)	Camsap1 (ENSCGRG00001013972)
Golden Hamster	MODERN SPECIES	771												Lcn4 (ENSMAUG00000008000) ##14	Dipk1b (ENSMAUG00000008552) #18	Agpat2 (ENSMAUG00000014597) #19	Egfl7 (ENSMAUG00000018987) #20	Notch1 (ENSMAUG00000011824) #22	Sec16a (ENSMAUG00000017966) #24	Inpp5e (ENSMAUG00000017678) #25	Pmpca (ENSMAUG00000013143) #26	Entr1 (ENSMAUG00000016839) #27	Snapc4 (ENSMAUG00000011728) #28	Card9 (ENSMAUG00000020442) #29	Dnlz (ENSMAUG00000019601) #30	Gpsm1 (ENSMAUG00000017225) #31	ENSMAUG00000014516 #33	Qsox2 (ENSMAUG00000002434) #35	Lhx3 (ENSMAUG00000016447) #36	Tmem250-ps (ENSMAUG00000016832) #37	Nacc2 (ENSMAUG00000019689)	Ubac1 (ENSMAUG00000009990)	ENSMAUG00000006623
Cricetidae_B	ANCESTRAL SPECIES	7	ENSGT00390000000529	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.a.c.b	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.b ##14	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Northern American deer mouse	MODERN SPECIES	17	Surf6 (ENSPEMG00000012589)	ENSPEMG00000030374	ENSPEMG00000028458	ENSPEMG00000028228	ENSPEMG00000028865	ENSPEMG00000026996 ##14	ENSPEMG00000010108 ##14	ENSPEMG00000016706	ENSPEMG00000005980	ENSPEMG00000015734	ENSPEMG00000010276	ENSPEMG00000025898 ##14	Dipk1b (ENSPEMG00000017048) #18	Agpat2 (ENSPEMG00000014610) #19	Egfl7 (ENSPEMG00000013587) #20	Notch1 (ENSPEMG00000013515) #22	Sec16a (ENSPEMG00000002372) #24	Inpp5e (ENSPEMG00000017488) #25	Pmpca (ENSPEMG00000016831) #26	Entr1 (ENSPEMG00000014447) #27	Snapc4 (ENSPEMG00000017310) #28	Card9 (ENSPEMG00000011112) #29	Dnlz (ENSPEMG00000009147) #30	Gpsm1 (ENSPEMG00000013682) #31	Ccdc187 (ENSPEMG00000013602) #33	Qsox2 (ENSPEMG00000009284) #35	Lhx3 (ENSPEMG00000009629) #36	Tmem250-ps (ENSPEMG00000025479) #37	Nacc2 (ENSPEMG00000011424)	Ubac1 (ENSPEMG00000017388)	Camsap1 (ENSPEMG00000012617)
Prairie vole	MODERN SPECIES	12	Cacfd1 (ENSMOCG00000018408)	Adamts13 (ENSMOCG00000008903)	Rexo4 (ENSMOCG00000020607)	Stkld1 (ENSMOCG00000000763)	Surf4 (ENSMOCG00000012757)	Surf2 (ENSMOCG00000013406)	Surf1 (ENSMOCG00000016034)	ENSMOCG00000015233	Med22 (ENSMOCG00000016419)	Surf6 (ENSMOCG00000011956)	ENSMOCG00000015215	ENSMOCG00000015173	Dipk1b (ENSMOCG00000009588) #18	Agpat2 (ENSMOCG00000002719) #19	Egfl7 (ENSMOCG00000017331) #20	Notch1 (ENSMOCG00000001663) #22	Sec16a (ENSMOCG00000013990) #24	Inpp5e (ENSMOCG00000005052) #25	Pmpca (ENSMOCG00000005001) #26	Entr1 (ENSMOCG00000018834) #27	Snapc4 (ENSMOCG00000007604) #28	Card9 (ENSMOCG00000013220) #29	Dnlz (ENSMOCG00000018564) #30	Gpsm1 (ENSMOCG00000016978) #31	ENSMOCG00000015098 #33	Qsox2 (ENSMOCG00000022455) #35	Lhx3 (ENSMOCG00000002906) #36	Tmem250-ps (ENSMOCG00000014787) #37	Nacc2 (ENSMOCG00000016088)	ENSMOCG00000017360	Ubac1 (ENSMOCG00000004758)
Murinae	ANCESTRAL SPECIES	1	ENSGT00390000000529	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##14	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Mus	ANCESTRAL SPECIES	1	ENSGT00390000000529	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##14	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Mus_A	ANCESTRAL SPECIES		ENSGT00390000000529	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##14	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000000529	ENSGT00940000158379	ENSGT00940000159607.e	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##14	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Mus_C	ANCESTRAL SPECIES		ENSGT00390000000529	ENSGT00940000158379	ENSGT00940000159607.e	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.a.c.a	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT01050000244868.a.a.a.a.a.b.h ##14	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Steppe mouse	MODERN SPECIES	2615										ENSMSIG00000028321	ENSMSIG00000028311	Lcn4 (ENSMSIG00000028306) ##14	Dipk1b (ENSMSIG00000028280) #18	ENSMSIG00000028270 #19	ENSMSIG00000028239 #20	Notch1 (ENSMSIG00000028222) #22	Sec16a (ENSMSIG00000028166) #24	Inpp5e (ENSMSIG00000028160) #25	Pmpca (ENSMSIG00000028147) #26	Entr1 (ENSMSIG00000028050) #27	Snapc4 (ENSMSIG00000028025) #28	Card9 (ENSMSIG00000028014) #29	Dnlz (ENSMSIG00000028011) #30	Gpsm1 (ENSMSIG00000027957) #31	Ccdc187 (ENSMSIG00000027882) #33	Qsox2 (ENSMSIG00000027872) #35	Lhx3 (ENSMSIG00000027861) #36	Tmem250-ps (ENSMSIG00000027859) #37	Nacc2 (ENSMSIG00000027849)	ENSMSIG00000027840	ENSMSIG00000027836
spretus	MODERN SPECIES	11	Adamts13 (MGP_SPRETEiJ_G0024250)	MGP_SPRETEiJ_G0024249	Stkld1 (MGP_SPRETEiJ_G0024248)	Surf4 (MGP_SPRETEiJ_G0024247)	Surf2 (MGP_SPRETEiJ_G0024246)	Surf1 (MGP_SPRETEiJ_G0024245)	Rpl7a (MGP_SPRETEiJ_G0024244)	Med22 (MGP_SPRETEiJ_G0024243)	Surf6 (MGP_SPRETEiJ_G0024242)	Abo (MGP_SPRETEiJ_G0024241)	Lcn4 (MGP_SPRETEiJ_G0024240) ##14	Dipk1b (MGP_SPRETEiJ_G0024239) #18	MGP_SPRETEiJ_G0024238	MGP_SPRETEiJ_G0024237	Egfl7 (MGP_SPRETEiJ_G0024236) #20	Notch1 (MGP_SPRETEiJ_G0024235) #22	Sec16a (MGP_SPRETEiJ_G0024234) #24	Inpp5e (MGP_SPRETEiJ_G0024233) #25	Pmpca (MGP_SPRETEiJ_G0024232) #26	Entr1 (MGP_SPRETEiJ_G0024231) #27	Snapc4 (MGP_SPRETEiJ_G0024230) #28	Card9 (MGP_SPRETEiJ_G0024229) #29	Dnlz (MGP_SPRETEiJ_G0024228) #30	Gpsm1 (MGP_SPRETEiJ_G0024227) #31	MGP_SPRETEiJ_G0024226	MGP_SPRETEiJ_G0024225 #33	Qsox2 (MGP_SPRETEiJ_G0024224) #35	Lhx3 (MGP_SPRETEiJ_G0024223) #36	Nacc2 (MGP_SPRETEiJ_G0024222)	Ubac1 (MGP_SPRETEiJ_G0024221)	Camsap1 (MGP_SPRETEiJ_G0024220)
Mouse	MODERN SPECIES	11	Cacfd1 (ENSMUSG00000015488)	Adamts13 (ENSMUSG00000014852)	Rexo4 (ENSMUSG00000052406)	Stkld1 (ENSMUSG00000049897)	Surf4 (ENSMUSG00000014867)	Surf2 (ENSMUSG00000014873)	Surf1 (ENSMUSG00000015790)	Rpl7a (ENSMUSG00000062647)	Med22 (ENSMUSG00000015776)	Surf6 (ENSMUSG00000036160)	Abo (ENSMUSG00000015787)	Lcn4 (ENSMUSG00000026919) ##14	Dipk1b (ENSMUSG00000036186) #18	Agpat2 (ENSMUSG00000026922) #19	Egfl7 (ENSMUSG00000026921) #20	Notch1 (ENSMUSG00000026923) #22	Sec16a (ENSMUSG00000026924) #24	Inpp5e (ENSMUSG00000026925) #25	Pmpca (ENSMUSG00000026926) #26	Entr1 (ENSMUSG00000026927) #27	Snapc4 (ENSMUSG00000036281) #28	Card9 (ENSMUSG00000026928) #29	Dnlz (ENSMUSG00000075467) #30	Gpsm1 (ENSMUSG00000026930) #31	Ccdc187 (ENSMUSG00000048038) #33	Qsox2 (ENSMUSG00000036327) #35	Lhx3 (ENSMUSG00000026934) #36	Tmem250-ps (ENSMUSG00000087679) #37	Nacc2 (ENSMUSG00000026932)	Ubac1 (ENSMUSG00000036352)	Camsap1 (ENSMUSG00000026933)
Ryukyu mouse	MODERN SPECIES	11	Adamts13 (MGP_CAROLIEiJ_G0023333)	MGP_CAROLIEiJ_G0023332	Stkld1 (MGP_CAROLIEiJ_G0023331)	Surf4 (MGP_CAROLIEiJ_G0023330)	Surf2 (MGP_CAROLIEiJ_G0023329)	Surf1 (MGP_CAROLIEiJ_G0023328)	Rpl7a (MGP_CAROLIEiJ_G0023327)	Med22 (MGP_CAROLIEiJ_G0023326)	Surf6 (MGP_CAROLIEiJ_G0023325)	Abo (MGP_CAROLIEiJ_G0023324)	Lcn4 (MGP_CAROLIEiJ_G0023323) ##14	Dipk1b (MGP_CAROLIEiJ_G0023322) #18	Agpat2 (MGP_CAROLIEiJ_G0023321) #19	MGP_CAROLIEiJ_G0023320	Egfl7 (MGP_CAROLIEiJ_G0023319) #20	Notch1 (MGP_CAROLIEiJ_G0023318) #22	Sec16a (MGP_CAROLIEiJ_G0023317) #24	Inpp5e (MGP_CAROLIEiJ_G0023316) #25	Pmpca (MGP_CAROLIEiJ_G0023315) #26	Entr1 (MGP_CAROLIEiJ_G0023314) #27	Snapc4 (MGP_CAROLIEiJ_G0023313) #28	Card9 (MGP_CAROLIEiJ_G0023312) #29	Dnlz (MGP_CAROLIEiJ_G0023311) #30	Gpsm1 (MGP_CAROLIEiJ_G0023310) #31	MGP_CAROLIEiJ_G0023309	MGP_CAROLIEiJ_G0023308 #33	Qsox2 (MGP_CAROLIEiJ_G0023307) #35	Lhx3 (MGP_CAROLIEiJ_G0023306) #36	Nacc2 (MGP_CAROLIEiJ_G0023305)	Ubac1 (MGP_CAROLIEiJ_G0023304)	Camsap1 (MGP_CAROLIEiJ_G0023303)
Shrew mouse	MODERN SPECIES	16	Adamts13 (MGP_PahariEiJ_G0024790)	Rexo4 (MGP_PahariEiJ_G0024789)	Stkld1 (MGP_PahariEiJ_G0024788)	Surf4 (MGP_PahariEiJ_G0024787)	Surf2 (MGP_PahariEiJ_G0024786)	Surf1 (MGP_PahariEiJ_G0024785)	MGP_PahariEiJ_G0024784	Med22 (MGP_PahariEiJ_G0024783)	Surf6 (MGP_PahariEiJ_G0024782)	Abo (MGP_PahariEiJ_G0024781)	Lcn4 (MGP_PahariEiJ_G0024780) ##14	Dipk1b (MGP_PahariEiJ_G0024779) #18	Agpat2 (MGP_PahariEiJ_G0024778) #19	MGP_PahariEiJ_G0024777	Egfl7 (MGP_PahariEiJ_G0024776) #20	Notch1 (MGP_PahariEiJ_G0024775) #22	Sec16a (MGP_PahariEiJ_G0024774) #24	Inpp5e (MGP_PahariEiJ_G0024773) #25	Pmpca (MGP_PahariEiJ_G0024772) #26	Entr1 (MGP_PahariEiJ_G0024771) #27	Snapc4 (MGP_PahariEiJ_G0024770) #28	Card9 (MGP_PahariEiJ_G0024769) #29	Dnlz (MGP_PahariEiJ_G0024768) #30	Gpsm1 (MGP_PahariEiJ_G0024767) #31	MGP_PahariEiJ_G0024766	MGP_PahariEiJ_G0024765 #33	MGP_PahariEiJ_G0024764 #35	Lhx3 (MGP_PahariEiJ_G0024763) #36	Nacc2 (MGP_PahariEiJ_G0024762)	Ubac1 (MGP_PahariEiJ_G0024761)	Camsap1 (MGP_PahariEiJ_G0024760)
Rat	MODERN SPECIES	13	LOC681385 (ENSRNOG00000043494) ##14	ENSRNOG00000069598	LOC681385 (ENSRNOG00000030708) ##14	ENSRNOG00000064101	Abo3 (ENSRNOG00000039906)	ENSRNOG00000067433 ##14	Rpl9-ps31 (ENSRNOG00000030476)	Lcn1 (ENSRNOG00000033020) ##14	Vegp2 (ENSRNOG00000033761) ##14	ENSRNOG00000068352	LOC102552073 (ENSRNOG00000056471)	LOC681186 (ENSRNOG00000069282)	Dipk1b (ENSRNOG00000004532) #18	Agpat2 (ENSRNOG00000019466) #19	Egfl7 (ENSRNOG00000019388) #20	Notch1 (ENSRNOG00000019322) #22	Sec16a (ENSRNOG00000019122) #24	Inpp5e (ENSRNOG00000019039) #25	Pmpca (ENSRNOG00000026775) #26	Entr1 (ENSRNOG00000018876) #27	Snapc4 (ENSRNOG00000018845) #28	Card9 (ENSRNOG00000051470) #29	Dnlz (ENSRNOG00000018791) #30	Gpsm1 (ENSRNOG00000018666) #31	Ccdc187 (ENSRNOG00000027392) #33	Qsox2 (ENSRNOG00000018574) #35	Lhx3 (ENSRNOG00000018427) #36	Tmem250 (ENSRNOG00000042501) #37	Nacc2 (ENSRNOG00000018231)	Ubac1 (ENSRNOG00000017983)	Camsap1 (ENSRNOG00000017883)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1179														Agpat2 (ENSNGAG00000013280) #19	Egfl7 (ENSNGAG00000012693) #20	Notch1 (ENSNGAG00000011223) #22	Sec16a (ENSNGAG00000011700) #24	Inpp5e (ENSNGAG00000009453) #25	Pmpca (ENSNGAG00000019335) #26	Entr1 (ENSNGAG00000016610) #27	Snapc4 (ENSNGAG00000015114) #28	Card9 (ENSNGAG00000020047) #29	Dnlz (ENSNGAG00000003205) #30	Gpsm1 (ENSNGAG00000000399) #31	ENSNGAG00000019924 #33	Qsox2 (ENSNGAG00000004702) #35	Lhx3 (ENSNGAG00000015784) #36	Tmem250-ps (ENSNGAG00000014022) #37	Nacc2 (ENSNGAG00000012885)	Ubac1 (ENSNGAG00000011289)	ENSNGAG00000007949
Lesser Egyptian jerboa	MODERN SPECIES	53	Dbh (ENSJJAG00000022847)	Sardh (ENSJJAG00000017332)	Vav2 (ENSJJAG00000011963)	Brd3 (ENSJJAG00000004342)	Wdr5 (ENSJJAG00000024197)	Rxra (ENSJJAG00000022734)	Col5a1 (ENSJJAG00000021138)	Fcnb (ENSJJAG00000014578)	Olfm1 (ENSJJAG00000023242)	Ppp1r26 (ENSJJAG00000023725)	Pierce1 (ENSJJAG00000024395)	Mrps2 (ENSJJAG00000004108)	ENSJJAG00000016902 #18	Agpat2 (ENSJJAG00000024146) #19	Egfl7 (ENSJJAG00000016779) #20	Notch1 (ENSJJAG00000002417) #22	Sec16a (ENSJJAG00000013749) #24	Inpp5e (ENSJJAG00000021257) #25	Pmpca (ENSJJAG00000014641) #26	Entr1 (ENSJJAG00000017251) #27	Snapc4 (ENSJJAG00000024311) #28	Card9 (ENSJJAG00000021080) #29	Dnlz (ENSJJAG00000015617) #30	Gpsm1 (ENSJJAG00000022361) #31	ENSJJAG00000023017 #33	Qsox2 (ENSJJAG00000016577) #35	ENSJJAG00000019174 #36	Tmem250-ps (ENSJJAG00000011868) #37	Nacc2 (ENSJJAG00000010154)	Ubac1 (ENSJJAG00000014746)	ENSJJAG00000016785
Kangaroo rat	MODERN SPECIES	437	Sardh (ENSDORG00000015678)	Vav2 (ENSDORG00000011913)	Brd3 (ENSDORG00000012653)	Wdr5 (ENSDORG00000015010)	Rxra (ENSDORG00000009780)	Col5a1 (ENSDORG00000006853)	Fcnb (ENSDORG00000004007)	Olfm1 (ENSDORG00000009691)	Ppp1r26 (ENSDORG00000011441)	Pierce1 (ENSDORG00000025281)	Mrps2 (ENSDORG00000009636)	Abo (ENSDORG00000014859)	Dipk1b (ENSDORG00000029150) #18	Agpat2 (ENSDORG00000001273) #19	ENSDORG00000001272 #20	Notch1 (ENSDORG00000011518) #22	Sec16a (ENSDORG00000015295) #24	Inpp5e (ENSDORG00000004941) #25	Pmpca (ENSDORG00000005777) #26	Entr1 (ENSDORG00000005775) #27	Snapc4 (ENSDORG00000026380) #28	Card9 (ENSDORG00000010502) #29	Gpsm1 (ENSDORG00000010497) #31	Qsox2 (ENSDORG00000029738) #35	Lhx3 (ENSDORG00000025865) #36	Tmem250-ps (ENSDORG00000028407) #37	Nacc2 (ENSDORG00000024416)	Ubac1 (ENSDORG00000005016)	Camsap1 (ENSDORG00000016086)	ENSDORG00000023336	Glt6d1 (ENSDORG00000007879)
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000014818	ENSGT00940000155193.a.a.f	ENSGT00940000153294.m.a.c.b	ENSGT00390000004339	ENSGT00390000006980	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000156621	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000153116.C.a ##13	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Marmotini	ANCESTRAL SPECIES	1	ENSGT00940000156621	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000153116.C.a ##13	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560.m.a.a #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734.e.a #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Marmotini_b	ANCESTRAL SPECIES	2	ENSGT00940000156621	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000153116.C.a ##13	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560.m.a.a #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734.e.a #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Arctic ground squirrel	MODERN SPECIES	156	TRAF2 (ENSUPAG00010006407)	EDF1 (ENSUPAG00010006437) #7	MAMDC4 (ENSUPAG00010006442) #8	PHPT1 (ENSUPAG00010006497) #9	AJM1 (ENSUPAG00010006500) #10	RABL6 (ENSUPAG00010006504) #11	ENSUPAG00010006516 ##13	TMEM141 (ENSUPAG00010006528) #13	LCN15 (ENSUPAG00010006536) #14	LCN8 (ENSUPAG00010006538) #15	LCN6 (ENSUPAG00010006550) #16	LCN10 (ENSUPAG00010006573) #17	DIPK1B (ENSUPAG00010006606) #18	AGPAT2 (ENSUPAG00010006616) #19	ENSUPAG00010006626 #20	NOTCH1 (ENSUPAG00010006771) #22	SEC16A (ENSUPAG00010006882) #24	INPP5E (ENSUPAG00010006961) #25	PMPCA (ENSUPAG00010006984) #26	ENSUPAG00010007001 #27	SNAPC4 (ENSUPAG00010007009) #28	CARD9 (ENSUPAG00010007067) #29	DNLZ (ENSUPAG00010007099) #30	GPSM1 (ENSUPAG00010007108) #31	ENSUPAG00010007204 #33	QSOX2 (ENSUPAG00010007235) #35	LHX3 (ENSUPAG00010007248) #36	TMEM250 (ENSUPAG00010007293) #37	NACC2 (ENSUPAG00010007297)	UBAC1 (ENSUPAG00010007327)	CAMSAP1 (ENSUPAG00010007377)
Squirrel	MODERN SPECIES	269	TRAF2 (ENSSTOG00000012096)	EDF1 (ENSSTOG00000025154) #7	MAMDC4 (ENSSTOG00000015455) #8	PHPT1 (ENSSTOG00000019599) #9	AJM1 (ENSSTOG00000026589) #10	RABL6 (ENSSTOG00000021251) #11	ENSSTOG00000022489 ##13	TMEM141 (ENSSTOG00000029115) #13	LCN15 (ENSSTOG00000024610) #14	LCN8 (ENSSTOG00000009404) #15	LCN6 (ENSSTOG00000021330) #16	LCN10 (ENSSTOG00000028192) #17	DIPK1B (ENSSTOG00000009097) #18	AGPAT2 (ENSSTOG00000023422) #19	ENSSTOG00000021911 #20	NOTCH1 (ENSSTOG00000005889) #22	SEC16A (ENSSTOG00000014119) #24	ENSSTOG00000014111 #25	PMPCA (ENSSTOG00000014103) #26	ENSSTOG00000014097 #27	SNAPC4 (ENSSTOG00000014067) #28	CARD9 (ENSSTOG00000014062) #29	DNLZ (ENSSTOG00000026290) #30	GPSM1 (ENSSTOG00000028230) #31	ENSSTOG00000021118 #33	QSOX2 (ENSSTOG00000005021) #35	LHX3 (ENSSTOG00000005001) #36	TMEM250 (ENSSTOG00000026801) #37	NACC2 (ENSSTOG00000022606)	UBAC1 (ENSSTOG00000015109)	CAMSAP1 (ENSSTOG00000015097)
Alpin marmot	MODERN SPECIES	106	FBXW5 (ENSMMMG00000009406)	TRAF2 (ENSMMMG00000009429)	EDF1 (ENSMMMG00000009463) #7	PHPT1 (ENSMMMG00000009614) #9	RABL6 (ENSMMMG00000009622) #11	ENSMMMG00000009637 ##13	ENSMMMG00000009663	LCN15 (ENSMMMG00000009670) #14	LCN8 (ENSMMMG00000009685) #15	LCN6 (ENSMMMG00000009705) #16	LCN10 (ENSMMMG00000009747) #17	DIPK1B (ENSMMMG00000009805) #18	AGPAT2 (ENSMMMG00000009810) #19	EGFL7 (ENSMMMG00000009814) #20	ENSMMMG00000009932	NOTCH1 (ENSMMMG00000009940) #22	SEC16A (ENSMMMG00000010470) #24	INPP5E (ENSMMMG00000010568) #25	PMPCA (ENSMMMG00000010621) #26	ENSMMMG00000010814 #27	SNAPC4 (ENSMMMG00000010852) #28	CARD9 (ENSMMMG00000010888) #29	DNLZ (ENSMMMG00000010896) #30	GPSM1 (ENSMMMG00000010910) #31	ENSMMMG00000010974 #33	ENSMMMG00000011069 #35	ENSMMMG00000011076 #35	LHX3 (ENSMMMG00000011096) #36	TMEM250 (ENSMMMG00000011135) #37	NACC2 (ENSMMMG00000011141)	UBAC1 (ENSMMMG00000011160)
Eurasian red squirrel	MODERN SPECIES	6	FBXW5 (ENSSVLG00005017960)	TRAF2 (ENSSVLG00005017919)	ENSSVLG00005017849 #7	PHPT1 (ENSSVLG00005016779) #9	AJM1 (ENSSVLG00005016763) #10	RABL6 (ENSSVLG00005016617) #11	ENSSVLG00005016575 ##13	TMEM141 (ENSSVLG00005025675) #13	LCN15 (ENSSVLG00005025667) #14	LCN8 (ENSSVLG00005025658) #15	LCN6 (ENSSVLG00005025649) #16	LCN10 (ENSSVLG00005025638) #17	DIPK1B (ENSSVLG00005025614) #18	AGPAT2 (ENSSVLG00005025601) #19	EGFL7 (ENSSVLG00005025586) #20	NOTCH1 (ENSSVLG00005025572) #22	SEC16A (ENSSVLG00005025541) #24	INPP5E (ENSSVLG00005025510) #25	PMPCA (ENSSVLG00005025480) #26	ENSSVLG00005025436 #27	SNAPC4 (ENSSVLG00005025357) #28	CARD9 (ENSSVLG00005025311) #29	DNLZ (ENSSVLG00005025294) #30	GPSM1 (ENSSVLG00005025269) #31	ENSSVLG00005025200 #33	QSOX2 (ENSSVLG00005025160) #35	LHX3 (ENSSVLG00005025119) #36	TMEM250 (ENSSVLG00005025103) #37	NACC2 (ENSSVLG00005025091)	UBAC1 (ENSSVLG00005025073)	CAMSAP1 (ENSSVLG00005025049)
Hystricomorpha	ANCESTRAL SPECIES	7	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000014818	ENSGT00940000155193.a.a.f	ENSGT00940000153294.m.a.c.b	ENSGT00390000004339	ENSGT00390000006980	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Hystricomorpha_a	ANCESTRAL SPECIES	5	ENSGT00940000159976	ENSGT00390000000529	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339	ENSGT00390000006980	ENSGT01050000244868.a.a.a.a.a.b.l ##14	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Hystricomorpha_b	ANCESTRAL SPECIES	36	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339	ENSGT00390000006980	ENSGT01050000244868.a.a.a.a.a.b.k.a ##14	ENSGT01050000244868.a.a.a.a.a.b.k.b ##14	ENSGT01050000244868.a.a.a.a.a.b.l ##14	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Long-tailed chinchilla	MODERN SPECIES	220	SARDH (ENSCLAG00000004708)	VAV2 (ENSCLAG00000004486)	ENSCLAG00000017720	BRD3 (ENSCLAG00000005354)	WDR5 (ENSCLAG00000006850)	RXRA (ENSCLAG00000004314)	COL5A1 (ENSCLAG00000006614)	FCN1 (ENSCLAG00000014782)	PPP1R26 (ENSCLAG00000017970)	PIERCE1 (ENSCLAG00000009620)	MRPS2 (ENSCLAG00000005994)	LCN10 (ENSCLAG00000006244) #17	DIPK1B (ENSCLAG00000007182) #18	AGPAT2 (ENSCLAG00000007355) #19	EGFL7 (ENSCLAG00000007758) #20	NOTCH1 (ENSCLAG00000006372) #22	SEC16A (ENSCLAG00000007897) #24	INPP5E (ENSCLAG00000004323) #25	PMPCA (ENSCLAG00000005003) #26	ENTR1 (ENSCLAG00000005304) #27	SNAPC4 (ENSCLAG00000007809) #28	CARD9 (ENSCLAG00000006761) #29	DNLZ (ENSCLAG00000007124) #30	GPSM1 (ENSCLAG00000014059) #31	ENSCLAG00000006606 #33	QSOX2 (ENSCLAG00000006564) #35	LHX3 (ENSCLAG00000007641) #36	TMEM250 (ENSCLAG00000008047) #37	NACC2 (ENSCLAG00000008816)	UBAC1 (ENSCLAG00000012458)	CAMSAP1 (ENSCLAG00000005984)
Degu	MODERN SPECIES	164	SLC2A6 (ENSODEG00000016923)	CACFD1 (ENSODEG00000015773)	ADAMTS13 (ENSODEG00000016041)	REXO4 (ENSODEG00000015721)	STKLD1 (ENSODEG00000015481)	SURF4 (ENSODEG00000015392)	SURF2 (ENSODEG00000015768)	SURF1 (ENSODEG00000016201)	ENSODEG00000016465	MED22 (ENSODEG00000015723)	SURF6 (ENSODEG00000015789)	ENSODEG00000015745 ##14	DIPK1B (ENSODEG00000015451) #18	AGPAT2 (ENSODEG00000015549) #19	EGFL7 (ENSODEG00000016479) #20	NOTCH1 (ENSODEG00000015576) #22	SEC16A (ENSODEG00000015396) #24	INPP5E (ENSODEG00000015384) #25	PMPCA (ENSODEG00000014945) #26	ENSODEG00000015730 #27	ENSODEG00000015531 #27	CARD9 (ENSODEG00000015926) #29	DNLZ (ENSODEG00000015199) #30	GPSM1 (ENSODEG00000015347) #31	QSOX2 (ENSODEG00000014987) #35	LHX3 (ENSODEG00000016123) #36	TMEM250 (ENSODEG00000020385) #37	NACC2 (ENSODEG00000015683)	UBAC1 (ENSODEG00000015106)	CAMSAP1 (ENSODEG00000014924)	ENSODEG00000014902
Guinea pig	MODERN SPECIES	18	MYMK (ENSCPOG00000021725)	SLC2A6 (ENSCPOG00000011691)	CACFD1 (ENSCPOG00000033970)	ADAMTS13 (ENSCPOG00000010285)	REXO4 (ENSCPOG00000001386)	STKLD1 (ENSCPOG00000021170)	SURF4 (ENSCPOG00000035717)	SURF2 (ENSCPOG00000037286)	SURF1 (ENSCPOG00000001328)	RPL7A (ENSCPOG00000032895)	MED22 (ENSCPOG00000001326)	SURF6 (ENSCPOG00000030454)	DIPK1B (ENSCPOG00000025816) #18	AGPAT2 (ENSCPOG00000019769) #19	ENSCPOG00000033928 #20	NOTCH1 (ENSCPOG00000012958) #22	SEC16A (ENSCPOG00000013586) #24	INPP5E (ENSCPOG00000009596) #25	PMPCA (ENSCPOG00000007258) #26	ENTR1 (ENSCPOG00000007252) #27	SNAPC4 (ENSCPOG00000006211) #28	CARD9 (ENSCPOG00000015152) #29	DNLZ (ENSCPOG00000022063) #30	GPSM1 (ENSCPOG00000027604) #31	ENSCPOG00000035077 #33	QSOX2 (ENSCPOG00000012489) #35	LHX3 (ENSCPOG00000007109) #36	TMEM250 (ENSCPOG00000032194) #37	NACC2 (ENSCPOG00000040403)	UBAC1 (ENSCPOG00000007953)	CAMSAP1 (ENSCPOG00000022674)
Naked mole-rat female	MODERN SPECIES	3	CACFD1 (ENSHGLG00000019453)	ADAMTS13 (ENSHGLG00000016856)	REXO4 (ENSHGLG00000016901)	ENSHGLG00000039152	SURF4 (ENSHGLG00000042282)	SURF2 (ENSHGLG00000019109)	SURF1 (ENSHGLG00000014684)	ENSHGLG00000038677	ENSHGLG00000013590	ENSHGLG00000013372	ENSHGLG00000032558	ENSHGLG00000050990 ##14	ENSHGLG00000012618 #18	AGPAT2 (ENSHGLG00000018608) #19	EGFL7 (ENSHGLG00000019272) #20	NOTCH1 (ENSHGLG00000011967) #22	SEC16A (ENSHGLG00000019238) #24	INPP5E (ENSHGLG00000014038) #25	PMPCA (ENSHGLG00000012489) #26	ENSHGLG00000018437 #27	SNAPC4 (ENSHGLG00000019312) #28	CARD9 (ENSHGLG00000013369) #29	ENSHGLG00000013032 #30	GPSM1 (ENSHGLG00000012552) #31	ENSHGLG00000036858	ENSHGLG00000049520	QSOX2 (ENSHGLG00000014265) #35	LHX3 (ENSHGLG00000013639) #36	TMEM250 (ENSHGLG00000012475) #37	ENSHGLG00000037882	UBAC1 (ENSHGLG00000012793)
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000157157.b #22
Pika	MODERN SPECIES	2079																ENSOPRG00000011529 #22
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.a.a ##14	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.a.a ##14	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.a.a ##14	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Suina	ANCESTRAL SPECIES	47	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.a.a ##14	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Pig	MODERN SPECIES	286	EDF1 (ENSSSCG00000038203) #7	MAMDC4 (ENSSSCG00000005832) #8	AJM1 (ENSSSCG00000057521) #10	RABL6 (ENSSSCG00000005841) #11	ENSSSCG00000005830 ##13	TMEM141 (ENSSSCG00000005842) #13	LCN15 (ENSSSCG00000038233) #14	LCN8 (ENSSSCG00000021963) #15	ENSSSCG00000005834 ##14	LCN6 (ENSSSCG00000005835) #16	LCN10 (ENSSSCG00000005836) #17	DIPK1B (ENSSSCG00000005837) #18	ENSSSCG00000040845 #19	AGPAT2 (ENSSSCG00000053941) #19	EGFL7 (ENSSSCG00000005828) #20	NOTCH1 (ENSSSCG00000038509) #22	SEC16A (ENSSSCG00000034854) #24	INPP5E (ENSSSCG00000040869) #25	PMPCA (ENSSSCG00000031413) #26	ENTR1 (ENSSSCG00000035221) #27	SNAPC4 (ENSSSCG00000038262) #28	CARD9 (ENSSSCG00000031715) #29	DNLZ (ENSSSCG00000034732) #30	GPSM1 (ENSSSCG00000039487) #31	ENSSSCG00000034036 #33	QSOX2 (ENSSSCG00000040163) #35	LHX3 (ENSSSCG00000034657) #36	TMEM250 (ENSSSCG00000054336) #37	NACC2 (ENSSSCG00000040967)	UBAC1 (ENSSSCG00000033162)	CAMSAP1 (ENSSSCG00000005753)
Chacoan peccary	MODERN SPECIES	65																NOTCH1 (ENSCWAG00000015574) #22	SEC16A (ENSCWAG00000018195) #24	INPP5E (ENSCWAG00000018305) #25	PMPCA (ENSCWAG00000018330) #26	ENTR1 (ENSCWAG00000018378) #27	SNAPC4 (ENSCWAG00000018598) #28	CARD9 (ENSCWAG00000019093) #29	DNLZ (ENSCWAG00000019177) #30	ENSCWAG00000019190 #31
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.a.a ##14	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT00950000184618	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.a.a ##14	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Cetacea	ANCESTRAL SPECIES	9	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a.f #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT00950000184618	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.a.a ##14	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a.f #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT00950000184618	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT00940000170859	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Odontoceti_a	ANCESTRAL SPECIES	19	ENSGT00940000162046 #8	ENSGT00390000002738.a.f #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000153116.C.a ##13	ENSGT00520000060469	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT00940000170859	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a.f #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000153116.C.a ##13	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT00940000170859	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000156621	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a.f #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT00940000170859	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Narwhal	MODERN SPECIES	312	TRAF2 (ENSMMNG00015019230)	EDF1 (ENSMMNG00015019204) #7	MAMDC4 (ENSMMNG00015019122) #8	ENSMMNG00015019093 #9	AJM1 (ENSMMNG00015019084) #10	RABL6 (ENSMMNG00015019023) #11	ENSMMNG00015018981 #12	TMEM141 (ENSMMNG00015018964) #13	ENSMMNG00015018937	ENSMMNG00015018915	LCN6 (ENSMMNG00015018885) #16	ENSMMNG00015018813 #17	DIPK1B (ENSMMNG00015018734) #18	AGPAT2 (ENSMMNG00015018689) #19	EGFL7 (ENSMMNG00015018637) #20	NOTCH1 (ENSMMNG00015018566) #22	SEC16A (ENSMMNG00015018406) #24	INPP5E (ENSMMNG00015018352) #25	PMPCA (ENSMMNG00015018250) #26	ENTR1 (ENSMMNG00015018088) #27	SNAPC4 (ENSMMNG00015017988) #28	CARD9 (ENSMMNG00015017932) #29	DNLZ (ENSMMNG00015017904) #30	GPSM1 (ENSMMNG00015017768) #31	ENSMMNG00015017632 #33	QSOX2 (ENSMMNG00015017566) #35	LHX3 (ENSMMNG00015017493) #36	TMEM250 (ENSMMNG00015017465) #37	NACC2 (ENSMMNG00015017441)	UBAC1 (ENSMMNG00015017402)	CAMSAP1 (ENSMMNG00015017305)
Beluga whale	MODERN SPECIES	19	TRAF2 (ENSDLEG00000015358)	EDF1 (ENSDLEG00000015396) #7	MAMDC4 (ENSDLEG00000015426) #8	ENSDLEG00000015526 #9	CUNH9orf172 (ENSDLEG00000015531) #10	RABL6 (ENSDLEG00000015563) #11	ENSDLEG00000015951 ##13	TMEM141 (ENSDLEG00000015982) #13	ENSDLEG00000015991 #15	ENSDLEG00000016011	LCN6 (ENSDLEG00000016024) #16	ENSDLEG00000016061	FAM69B (ENSDLEG00000016090) #18	AGPAT2 (ENSDLEG00000016099) #19	EGFL7 (ENSDLEG00000016110) #20	NOTCH1 (ENSDLEG00000016186) #22	SEC16A (ENSDLEG00000016491) #24	INPP5E (ENSDLEG00000019359) #25	PMPCA (ENSDLEG00000019404) #26	SDCCAG3 (ENSDLEG00000019648) #27	SNAPC4 (ENSDLEG00000019669) #28	CARD9 (ENSDLEG00000019684) #29	DNLZ (ENSDLEG00000019697) #30	GPSM1 (ENSDLEG00000019707) #31	ENSDLEG00000000142 #33	QSOX2 (ENSDLEG00000000181) #35	LHX3 (ENSDLEG00000000268) #36	TMEM250 (ENSDLEG00000000366) #37	NACC2 (ENSDLEG00000000381)	UBAC1 (ENSDLEG00000000420)	CAMSAP1 (ENSDLEG00000000466)
Vaquita	MODERN SPECIES	17	ENSPSNG00000002179	FBXW5 (ENSPSNG00000002217)	TRAF2 (ENSPSNG00000002244)	EDF1 (ENSPSNG00000002285) #7	PHPT1 (ENSPSNG00000002382) #9	ENSPSNG00000002512	ENSPSNG00000002607 #12	TMEM141 (ENSPSNG00000002634) #13	ENSPSNG00000002656	ENSPSNG00000002683	LCN6 (ENSPSNG00000002714) #16	LCN10 (ENSPSNG00000002748) #17	DIPK1B (ENSPSNG00000002782) #18	AGPAT2 (ENSPSNG00000002833) #19	EGFL7 (ENSPSNG00000002877) #20	NOTCH1 (ENSPSNG00000002953) #22	SEC16A (ENSPSNG00000003074) #24	INPP5E (ENSPSNG00000003142) #25	PMPCA (ENSPSNG00000003191) #26	ENTR1 (ENSPSNG00000003257) #27	SNAPC4 (ENSPSNG00000003425) #28	CARD9 (ENSPSNG00000003517) #29	DNLZ (ENSPSNG00000003537) #30	GPSM1 (ENSPSNG00000003585) #31	ENSPSNG00000003644 #33	QSOX2 (ENSPSNG00000003669) #35	LHX3 (ENSPSNG00000003704) #36	TMEM250 (ENSPSNG00000003733) #37	NACC2 (ENSPSNG00000003746)	UBAC1 (ENSPSNG00000003773)	CAMSAP1 (ENSPSNG00000003852)
Dolphin	MODERN SPECIES	3327											ENSTTRG00000007589	LCN6 (ENSTTRG00000007588) #16	ENSTTRG00000007587	AGPAT2 (ENSTTRG00000007586) #19	EGFL7 (ENSTTRG00000007585) #20	NOTCH1 (ENSTTRG00000007583) #22	SEC16A (ENSTTRG00000007581) #24	INPP5E (ENSTTRG00000007580) #25	PMPCA (ENSTTRG00000007579) #26	ENTR1 (ENSTTRG00000007578) #27	ENSTTRG00000007574 #28	CARD9 (ENSTTRG00000007573) #29	ENSTTRG00000007572	GPSM1 (ENSTTRG00000007571) #31	QSOX2 (ENSTTRG00000007570) #35	LHX3 (ENSTTRG00000007569) #36
Sperm whale	MODERN SPECIES	4	TRAF2 (ENSPCTG00005008255)	FBXW5 (ENSPCTG00005008288)	MAMDC4 (ENSPCTG00005008346) #8	PHPT1 (ENSPCTG00005008655) #9	AJM1 (ENSPCTG00005008687) #10	RABL6 (ENSPCTG00005008721) #11	CCDC183 (ENSPCTG00005008792) #12	ENSPCTG00005008876 #13	ENSPCTG00005008909 #13	ENSPCTG00005008947	LCN8 (ENSPCTG00005008995) #15	ENSPCTG00005009085	DIPK1B (ENSPCTG00005009146) #18	AGPAT2 (ENSPCTG00005009252) #19	EGFL7 (ENSPCTG00005009325) #20	NOTCH1 (ENSPCTG00005009415) #22	SEC16A (ENSPCTG00005009503) #24	INPP5E (ENSPCTG00005009723) #25	PMPCA (ENSPCTG00005009778) #26	ENTR1 (ENSPCTG00005009894) #27	SNAPC4 (ENSPCTG00005010069) #28	CARD9 (ENSPCTG00005010146) #29	DNLZ (ENSPCTG00005010215) #30	GPSM1 (ENSPCTG00005010276) #31	ENSPCTG00005010541 #33	QSOX2 (ENSPCTG00005010784) #35	LHX3 (ENSPCTG00005010847) #36	ENSPCTG00005010974	TMEM250 (ENSPCTG00005010996) #37	NACC2 (ENSPCTG00005011010)	UBAC1 (ENSPCTG00005011069)
Blue whale	MODERN SPECIES	17	TRAF2 (ENSBMSG00010006905)	EDF1 (ENSBMSG00010006887) #7	MAMDC4 (ENSBMSG00010006817) #8	PHPT1 (ENSBMSG00010006736) #9	AJM1 (ENSBMSG00010006721) #10	RABL6 (ENSBMSG00010006683) #11	CCDC183 (ENSBMSG00010006635) #12	TMEM141 (ENSBMSG00010006608) #13	LCN8 (ENSBMSG00010006591) #15	ENSBMSG00010006543 ##14	LCN6 (ENSBMSG00010006505) #16	LCN10 (ENSBMSG00010006474) #17	DIPK1B (ENSBMSG00010006420) #18	AGPAT2 (ENSBMSG00010006383) #19	EGFL7 (ENSBMSG00010006311) #20	NOTCH1 (ENSBMSG00010006271) #22	SEC16A (ENSBMSG00010006223) #24	INPP5E (ENSBMSG00010006192) #25	PMPCA (ENSBMSG00010006169) #26	ENTR1 (ENSBMSG00010006084) #27	SNAPC4 (ENSBMSG00010005976) #28	CARD9 (ENSBMSG00010005914) #29	DNLZ (ENSBMSG00010005887) #30	GPSM1 (ENSBMSG00010005849) #31	ENSBMSG00010005810 #33	QSOX2 (ENSBMSG00010005791) #35	LHX3 (ENSBMSG00010005757) #36	NACC2 (ENSBMSG00010005731)	UBAC1 (ENSBMSG00010005712)	CAMSAP1 (ENSBMSG00010005670)	KCNT1 (ENSBMSG00010005085)
Pecora	ANCESTRAL SPECIES	5	ENSGT00390000000529	ENSGT00940000178229	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339.f	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Percora_a	ANCESTRAL SPECIES	27	ENSGT00390000000529	ENSGT00940000178229	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339.f	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Bovidae	ANCESTRAL SPECIES	5	ENSGT00390000000529	ENSGT00940000178229	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339.f	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Caprinae	ANCESTRAL SPECIES	27	ENSGT00390000000529	ENSGT00940000178229	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339.f	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Rambouillet Sheep	MODERN SPECIES	19	ENSOARG00020002327	ENSOARG00020002341	STKLD1 (ENSOARG00020002366)	SURF4 (ENSOARG00020002392)	SURF2 (ENSOARG00020002406)	SURF1 (ENSOARG00020002412)	ENSOARG00020002423	MED22 (ENSOARG00020002441)	SURF6 (ENSOARG00020002448)	ENSOARG00020002455	DIPK1B (ENSOARG00020002483) #18	ENSOARG00020002513 #19	EGFL7 (ENSOARG00020002558) #20	ENSOARG00020002591	ENSOARG00020002602	NOTCH1 (ENSOARG00020002622) #22	INPP5E (ENSOARG00020002704) #25	PMPCA (ENSOARG00020002792) #26	ENTR1 (ENSOARG00020002831) #27	SNAPC4 (ENSOARG00020003067) #28	CARD9 (ENSOARG00020004236) #29	ENSOARG00020004267	GPSM1 (ENSOARG00020004303) #31	ENSOARG00020004433 #33	QSOX2 (ENSOARG00020004598) #35	LHX3 (ENSOARG00020004662) #36	TMEM250 (ENSOARG00020004761) #37	NACC2 (ENSOARG00020004779)	UBAC1 (ENSOARG00020004817)	PAEP (ENSOARG00020004839) ##14	CAMSAP1 (ENSOARG00020004888)
Goat	MODERN SPECIES	2	MYMK (ENSCHIG00000025700)	SLC2A6 (ENSCHIG00000022381)	CACFD1 (ENSCHIG00000022694)	ADAMTS13 (ENSCHIG00000025823)	REXO4 (ENSCHIG00000009517)	SURF4 (ENSCHIG00000016835)	SURF2 (ENSCHIG00000022633)	SURF1 (ENSCHIG00000005972)	ENSCHIG00000003945	MED22 (ENSCHIG00000025808)	SURF6 (ENSCHIG00000025220)	ENSCHIG00000016256	DIPK1B (ENSCHIG00000014246) #18	AGPAT2 (ENSCHIG00000014858) #19	EGFL7 (ENSCHIG00000023457) #20	NOTCH1 (ENSCHIG00000021033) #22	SEC16A (ENSCHIG00000020286) #24	INPP5E (ENSCHIG00000004726) #25	PMPCA (ENSCHIG00000013065) #26	ENTR1 (ENSCHIG00000018825) #27	SNAPC4 (ENSCHIG00000013796) #28	CARD9 (ENSCHIG00000013779) #29	DNLZ (ENSCHIG00000019744) #30	ENSCHIG00000017713 #31	QSOX2 (ENSCHIG00000014232) #35	LHX3 (ENSCHIG00000024793) #36	TMEM250 (ENSCHIG00000010273) #37	NACC2 (ENSCHIG00000007966)	UBAC1 (ENSCHIG00000018504)	CAMSAP1 (ENSCHIG00000016116)	KCNT1 (ENSCHIG00000007884)
Bovinae	ANCESTRAL SPECIES	4	ENSGT00390000000529	ENSGT00940000178229	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339.f	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Bos	ANCESTRAL SPECIES	5	ENSGT00940000178229	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339.f	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000015224.c.a.a.b.e.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Bos_b	ANCESTRAL SPECIES	16	ENSGT00940000178229	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339.f	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000015224.c.a.a.b.e.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Hybrid Bos Indicus	MODERN SPECIES	2	ADAMTS13 (ENSBIXG00005029885)	REXO4 (ENSBIXG00005029874)	STKLD1 (ENSBIXG00005029843)	SURF4 (ENSBIXG00005029795)	SURF2 (ENSBIXG00005029782)	SURF1 (ENSBIXG00005029756)	ENSBIXG00005029716	MED22 (ENSBIXG00005029700)	SURF6 (ENSBIXG00005029689)	ENSBIXG00005029686	ENSBIXG00005029668	ENSBIXG00005029644	DIPK1B (ENSBIXG00005029611) #18	ENSBIXG00005029589 #19	ENSBIXG00005029555 #20	NOTCH1 (ENSBIXG00005029490) #22	SEC16A (ENSBIXG00005007954) #24	INPP5E (ENSBIXG00005000112) #25	PMPCA (ENSBIXG00005008108) #26	ENTR1 (ENSBIXG00005008201) #27	SNAPC4 (ENSBIXG00005008329) #28	CARD9 (ENSBIXG00005008353) #29	DNLZ (ENSBIXG00005008367) #30	GPSM1 (ENSBIXG00005008412) #31	ENSBIXG00005008484 #33	QSOX2 (ENSBIXG00005008520) #35	LHX3 (ENSBIXG00005008551) #36	TMEM250 (ENSBIXG00005008570) #37	NACC2 (ENSBIXG00005008585)	UBAC1 (ENSBIXG00005008614)	CAMSAP1 (ENSBIXG00005008646)
Cow	MODERN SPECIES	2	ADAMTS13 (ENSBTAG00000015093)	REXO4 (ENSBTAG00000019721)	STKLD1 (ENSBTAG00000004140)	SURF4 (ENSBTAG00000051352)	SURF2 (ENSBTAG00000000046)	SURF1 (ENSBTAG00000030384)	RPL7A (ENSBTAG00000011559)	MED22 (ENSBTAG00000011556)	SURF6 (ENSBTAG00000011554)	ABO (ENSBTAG00000012525)	ENSBTAG00000030281	DIPK1B (ENSBTAG00000021928) #18	AGPAT2 (ENSBTAG00000025161) #19	EGFL7 (ENSBTAG00000030278) #20	ENSBTAG00000049379	NOTCH1 (ENSBTAG00000022799) #22	SEC16A (ENSBTAG00000023933) #24	INPP5E (ENSBTAG00000001354) #25	PMPCA (ENSBTAG00000001353) #26	ENTR1 (ENSBTAG00000001352) #27	SNAPC4 (ENSBTAG00000000054) #28	CARD9 (ENSBTAG00000006572) #29	DNLZ (ENSBTAG00000012880) #30	GPSM1 (ENSBTAG00000018799) #31	ENSBTAG00000023064 #33	QSOX2 (ENSBTAG00000011129) #35	LHX3 (ENSBTAG00000011124) #36	TMEM250 (ENSBTAG00000046939)	NACC2 (ENSBTAG00000020490)	UBAC1 (ENSBTAG00000039851)	CAMSAP1 (ENSBTAG00000006008)
Bos_a	ANCESTRAL SPECIES	23	ENSGT00940000178229	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339.f	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000015224.c.a.a.b.e.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Domestic yak	MODERN SPECIES	28	CACFD1 (ENSBGRG00000003856)	ADAMTS13 (ENSBGRG00000003687)	REXO4 (ENSBGRG00000003644)	STKLD1 (ENSBGRG00000003549)	SURF4 (ENSBGRG00000003520)	SURF2 (ENSBGRG00000003491)	SURF1 (ENSBGRG00000003459)	ENSBGRG00000025968	MED22 (ENSBGRG00000025954)	SURF6 (ENSBGRG00000025947)	ENSBGRG00000025935	ENSBGRG00000025928	DIPK1B (ENSBGRG00000025911) #18	AGPAT2 (ENSBGRG00000025897) #19	ENSBGRG00000025875 #20	NOTCH1 (ENSBGRG00000025848) #22	SEC16A (ENSBGRG00000025640) #24	INPP5E (ENSBGRG00000025512) #25	PMPCA (ENSBGRG00000025447) #26	ENTR1 (ENSBGRG00000025355) #27	ENSBGRG00000025344	SNAPC4 (ENSBGRG00000025195) #28	CARD9 (ENSBGRG00000025118) #29	DNLZ (ENSBGRG00000025104) #30	GPSM1 (ENSBGRG00000024972) #31	ENSBGRG00000024934 #33	QSOX2 (ENSBGRG00000024893) #35	LHX3 (ENSBGRG00000024850) #36	ENSBGRG00000024840	NACC2 (ENSBGRG00000024826)	UBAC1 (ENSBGRG00000024753)
Wild yak	MODERN SPECIES	161												ENSBMUG00000001057	DIPK1B (ENSBMUG00000001082) #18	AGPAT2 (ENSBMUG00000001095) #19	EGFL7 (ENSBMUG00000001124) #20	NOTCH1 (ENSBMUG00000002343) #22	SEC16A (ENSBMUG00000003595) #24	INPP5E (ENSBMUG00000004106) #25	PMPCA (ENSBMUG00000004156) #26	ENTR1 (ENSBMUG00000004170) #27	SNAPC4 (ENSBMUG00000004338) #28	CARD9 (ENSBMUG00000004473) #29	DNLZ (ENSBMUG00000004493) #30	GPSM1 (ENSBMUG00000004502) #31	ENSBMUG00000004556 #33	QSOX2 (ENSBMUG00000004633) #35	LHX3 (ENSBMUG00000004664) #36	ENSBMUG00000004673 #37	NACC2 (ENSBMUG00000004700)	UBAC1 (ENSBMUG00000004715)	CAMSAP1 (ENSBMUG00000004848)
Siberian musk deer	MODERN SPECIES	1178	MYMK (ENSMMSG00000017340)	SLC2A6 (ENSMMSG00000017296)	CACFD1 (ENSMMSG00000017256)	ENSMMSG00000017237	ENSMMSG00000017170	REXO4 (ENSMMSG00000017141)	SURF4 (ENSMMSG00000017110)	SURF2 (ENSMMSG00000017092)	ENSMMSG00000017048	ENSMMSG00000017005	MED22 (ENSMMSG00000019115)	SURF6 (ENSMMSG00000019063)	DIPK1B (ENSMMSG00000018999) #18	AGPAT2 (ENSMMSG00000018937) #19	EGFL7 (ENSMMSG00000018878) #20	NOTCH1 (ENSMMSG00000018769) #22	SEC16A (ENSMMSG00000018596) #24	INPP5E (ENSMMSG00000018533) #25	PMPCA (ENSMMSG00000018461) #26	ENTR1 (ENSMMSG00000018277) #27	SNAPC4 (ENSMMSG00000018179) #28	CARD9 (ENSMMSG00000018040) #29	DNLZ (ENSMMSG00000018005) #30	GPSM1 (ENSMMSG00000017853) #31	ENSMMSG00000017799 #33	QSOX2 (ENSMMSG00000017697) #35	LHX3 (ENSMMSG00000017607) #36	NACC2 (ENSMMSG00000017566)	UBAC1 (ENSMMSG00000017512)	CAMSAP1 (ENSMMSG00000017438)	KCNT1 (ENSMMSG00000011544)
Yarkand deer	MODERN SPECIES	2	SLC2A6 (ENSCHYG00000010600)	CACFD1 (ENSCHYG00000010507)	ADAMTS13 (ENSCHYG00000010317)	REXO4 (ENSCHYG00000010246)	ENSCHYG00000010174	SURF4 (ENSCHYG00000009955)	SURF2 (ENSCHYG00000009850)	SURF1 (ENSCHYG00000009643)	ENSCHYG00000009488	MED22 (ENSCHYG00000009429)	SURF6 (ENSCHYG00000009401)	ENSCHYG00000009352	DIPK1B (ENSCHYG00000009252) #18	AGPAT2 (ENSCHYG00000009123) #19	ENSCHYG00000008811 #20	NOTCH1 (ENSCHYG00000008626) #22	SEC16A (ENSCHYG00000007686) #24	INPP5E (ENSCHYG00000007535) #25	PMPCA (ENSCHYG00000007436) #26	ENTR1 (ENSCHYG00000007198) #27	SNAPC4 (ENSCHYG00000007022) #28	CARD9 (ENSCHYG00000006923) #29	GPSM1 (ENSCHYG00000006855) #31	ENSCHYG00000006716 #33	QSOX2 (ENSCHYG00000006603) #35	LHX3 (ENSCHYG00000026603) #36	TMEM250 (ENSCHYG00000026594) #37	NACC2 (ENSCHYG00000026588)	UBAC1 (ENSCHYG00000026555)	CAMSAP1 (ENSCHYG00000026516)	KCNT1 (ENSCHYG00000025895)
Camelidae	ANCESTRAL SPECIES	65	ENSGT00390000000529	ENSGT00940000178229	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.m.b	ENSGT00390000004339.e.b	ENSGT00940000170286	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220.c #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Arabian camel	MODERN SPECIES	30	ENSCDRG00005000622	ENSCDRG00005000643	REXO4 (ENSCDRG00005000665)	STKLD1 (ENSCDRG00005000727)	ENSCDRG00005000794	SURF2 (ENSCDRG00005000808)	ENSCDRG00005000827	SURF1 (ENSCDRG00005000843)	ENSCDRG00005000860	ENSCDRG00005000916	ENSCDRG00005000937	ENSCDRG00005000956	DIPK1B (ENSCDRG00005001006) #18	AGPAT2 (ENSCDRG00005001034) #19	ENSCDRG00005001079 #20	NOTCH1 (ENSCDRG00005001130) #22	SEC16A (ENSCDRG00005001240) #24	INPP5E (ENSCDRG00005001361) #25	PMPCA (ENSCDRG00005001401) #26	ENTR1 (ENSCDRG00005001472) #27	SNAPC4 (ENSCDRG00005001573) #28	CARD9 (ENSCDRG00005001608) #29	ENSCDRG00005001626 #30	GPSM1 (ENSCDRG00005001642) #31	ENSCDRG00005001715 #33	QSOX2 (ENSCDRG00005001830) #35	LHX3 (ENSCDRG00005001876) #36	TMEM250 (ENSCDRG00005001892) #37	NACC2 (ENSCDRG00005001900)	UBAC1 (ENSCDRG00005001921)	CAMSAP1 (ENSCDRG00005001959)
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.a.a ##14	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Carnivora	ANCESTRAL SPECIES	18	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000153294.n	ENSGT00390000014818	ENSGT00940000153294.m.a	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a.n	ENSGT00950000182858.A.a.a.m	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Caniformia	ANCESTRAL SPECIES	16	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.a.a ##14	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Caniformia_b	ANCESTRAL SPECIES	12	ENSGT01050000244868.b.b ##14	ENSGT00440000034309	ENSGT00990000203858	ENSGT00730000111276	ENSGT00940000156621	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000153116.C.a ##13	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Ursidae	ANCESTRAL SPECIES	6	ENSGT00390000008519 #7	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00520000060469	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT00940000170859	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Giant Panda	MODERN SPECIES	17	ENSAMEG00000029778 ##14	ENSAMEG00000013340	LCN12 (ENSAMEG00000013336) ##14	C8G (ENSAMEG00000013326)	FBXW5 (ENSAMEG00000013314)	TRAF2 (ENSAMEG00000013275)	EDF1 (ENSAMEG00000024052) #7	PHPT1 (ENSAMEG00000013248) #9	AJM1 (ENSAMEG00000026912) #10	RABL6 (ENSAMEG00000013211) #11	CCDC183 (ENSAMEG00000013189) #12	ENSAMEG00000027528	DIPK1B (ENSAMEG00000023983) #18	AGPAT2 (ENSAMEG00000003965) #19	EGFL7 (ENSAMEG00000003952) #20	NOTCH1 (ENSAMEG00000003827) #22	SEC16A (ENSAMEG00000003760) #24	INPP5E (ENSAMEG00000003733) #25	PMPCA (ENSAMEG00000003694) #26	ENTR1 (ENSAMEG00000003675) #27	SNAPC4 (ENSAMEG00000003669) #28	CARD9 (ENSAMEG00000003641) #29	DNLZ (ENSAMEG00000003639) #30	GPSM1 (ENSAMEG00000003593) #31	ENSAMEG00000029669 #33	ENSAMEG00000003573 #35	LHX3 (ENSAMEG00000003556) #36	TMEM250 (ENSAMEG00000003554) #37	NACC2 (ENSAMEG00000003538)	ENSAMEG00000003506	CAMSAP1 (ENSAMEG00000003475)
Ursus	ANCESTRAL SPECIES	118	ENSGT00940000156621	ENSGT00390000008519 #7	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT00940000170859	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
American black bear	MODERN SPECIES	2059																NOTCH1 (ENSUAMG00000026046) #22	SEC16A (ENSUAMG00000000030) #24	INPP5E (ENSUAMG00000000095) #25
Mustelinae	ANCESTRAL SPECIES	12	ENSGT00940000156621	ENSGT00390000008519 #7	ENSGT00940000162046 #8	ENSGT00390000002738.a #9	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.a.a ##14	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
American mink	MODERN SPECIES	395													DIPK1B (ENSNVIG00000010736) #18	AGPAT2 (ENSNVIG00000010745) #19	EGFL7 (ENSNVIG00000010752) #20	NOTCH1 (ENSNVIG00000010812) #22	SEC16A (ENSNVIG00000010899) #24	INPP5E (ENSNVIG00000012928) #25	PMPCA (ENSNVIG00000013020) #26	ENTR1 (ENSNVIG00000013185) #27	SNAPC4 (ENSNVIG00000013351) #28	CARD9 (ENSNVIG00000014001) #29	DNLZ (ENSNVIG00000014097) #30	GPSM1 (ENSNVIG00000014115) #31	ENSNVIG00000014282 #33	QSOX2 (ENSNVIG00000014518) #35	LHX3 (ENSNVIG00000014671) #36	TMEM250 (ENSNVIG00000014917) #37	NACC2 (ENSNVIG00000014952)	UBAC1 (ENSNVIG00000015186)	CAMSAP1 (ENSNVIG00000015998)
Ferret	MODERN SPECIES	218	EDF1 (ENSMPUG00000011008) #7	ENSMPUG00000019197	RABL6 (ENSMPUG00000011046) #11	ENSMPUG00000011120 ##13	TMEM141 (ENSMPUG00000011146) #13	LCN15 (ENSMPUG00000011152) #14	LCN8 (ENSMPUG00000011189) #15	ENSMPUG00000011204 ##14	LCN6 (ENSMPUG00000011217) #16	LCN10 (ENSMPUG00000011234) #17	DIPK1B (ENSMPUG00000011247) #18	AGPAT2 (ENSMPUG00000011249) #19	ENSMPUG00000019202	EGFL7 (ENSMPUG00000011294) #20	ENSMPUG00000011321	NOTCH1 (ENSMPUG00000011325) #22	SEC16A (ENSMPUG00000011340) #24	INPP5E (ENSMPUG00000011487) #25	PMPCA (ENSMPUG00000011493) #26	ENTR1 (ENSMPUG00000011499) #27	SNAPC4 (ENSMPUG00000011503) #28	CARD9 (ENSMPUG00000011535) #29	ENSMPUG00000011563	ENSMPUG00000019205	GPSM1 (ENSMPUG00000011570) #31	ENSMPUG00000019209	ENSMPUG00000011579	ENSMPUG00000011582 #33	QSOX2 (ENSMPUG00000011601) #35	LHX3 (ENSMPUG00000011666) #36	NACC2 (ENSMPUG00000011704)
Canidae	ANCESTRAL SPECIES	2	ENSGT00730000111276	ENSGT00940000156621	ENSGT00390000008519 #7	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000163544 #12	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00990000203858	ENSGT00730000111276	ENSGT00940000156621	ENSGT00390000008519 #7	ENSGT00390000002738.a #9	ENSGT00390000016543 #10	ENSGT00390000016002 #11	ENSGT00940000153116.D #13	ENSGT01050000244868.a.a.b.a.b #14	ENSGT01050000244868.a.a.b.b.a.b #15	ENSGT01050000244868.a.a.b.b.b.b #16	ENSGT01050000244868.a.a.b.b.b.a #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Dog	MODERN SPECIES	37	C8G (ENSCAFG00845005165)	FBXW5 (ENSCAFG00845005172)	ENSCAFG00845005180	TRAF2 (ENSCAFG00845005186)	EDF1 (ENSCAFG00845005198) #7	PHPT1 (ENSCAFG00845005276) #9	AJM1 (ENSCAFG00845005285) #10	RABL6 (ENSCAFG00845005293) #11	LCN15 (ENSCAFG00845005322) #14	LCN8 (ENSCAFG00845005343) #15	LCN6 (ENSCAFG00845005355) #16	ENSCAFG00845005360 #17	DIPK1B (ENSCAFG00845005381) #18	AGPAT2 (ENSCAFG00845005389) #19	ENSCAFG00845005400 #20	NOTCH1 (ENSCAFG00845005453) #22	SEC16A (ENSCAFG00845005678) #24	INPP5E (ENSCAFG00845005885) #25	PMPCA (ENSCAFG00845005923) #26	ENTR1 (ENSCAFG00845005993) #27	SNAPC4 (ENSCAFG00845006095) #28	CARD9 (ENSCAFG00845006183) #29	DNLZ (ENSCAFG00845006222) #30	GPSM1 (ENSCAFG00845006295) #31	ENSCAFG00845006466 #33	QSOX2 (ENSCAFG00845006815) #35	LHX3 (ENSCAFG00845007030) #36	TMEM250 (ENSCAFG00845007107) #37	NACC2 (ENSCAFG00845007192)	UBAC1 (ENSCAFG00845007292)	CAMSAP1 (ENSCAFG00845007447)
Dingo	MODERN SPECIES	327	ENSCAFG00020002821	FBXW5 (ENSCAFG00020002809)	TRAF2 (ENSCAFG00020002801)	EDF1 (ENSCAFG00020002800) #7	PHPT1 (ENSCAFG00020002736) #9	AJM1 (ENSCAFG00020002731) #10	RABL6 (ENSCAFG00020002727) #11	ENSCAFG00020002704 #13	LCN15 (ENSCAFG00020002693) #14	LCN8 (ENSCAFG00020002687) #15	LCN6 (ENSCAFG00020002660) #16	LCN10 (ENSCAFG00020002649) #17	ENSCAFG00020002631 #18	AGPAT2 (ENSCAFG00020002617) #19	EGFL7 (ENSCAFG00020002575) #20	NOTCH1 (ENSCAFG00020002327) #22	SEC16A (ENSCAFG00020002294) #24	INPP5E (ENSCAFG00020002279) #25	PMPCA (ENSCAFG00020002265) #26	ENTR1 (ENSCAFG00020002262) #27	SNAPC4 (ENSCAFG00020002256) #28	CARD9 (ENSCAFG00020002246) #29	DNLZ (ENSCAFG00020002235) #30	GPSM1 (ENSCAFG00020002226) #31	ENSCAFG00020002190 #33	QSOX2 (ENSCAFG00020002044) #35	LHX3 (ENSCAFG00020001973) #36	TMEM250 (ENSCAFG00020001965) #37	NACC2 (ENSCAFG00020001961)	UBAC1 (ENSCAFG00020001955)	CAMSAP1 (ENSCAFG00020001481)
Red fox	MODERN SPECIES	166	ENSVVUG00000026042	FBXW5 (ENSVVUG00000026043)	TRAF2 (ENSVVUG00000026044)	ENSVVUG00000026045 #7	AJM1 (ENSVVUG00000026054) #10	RABL6 (ENSVVUG00000026058) #11	CCDC183 (ENSVVUG00000026063) #12	TMEM141 (ENSVVUG00000026066) #13	LCN15 (ENSVVUG00000026067) #14	ENSVVUG00000026068	LCN6 (ENSVVUG00000026069) #16	LCN10 (ENSVVUG00000026072) #17	FAM69B (ENSVVUG00000026085) #18	AGPAT2 (ENSVVUG00000026090) #19	EGFL7 (ENSVVUG00000026092) #20	NOTCH1 (ENSVVUG00000026126) #22	SEC16A (ENSVVUG00000026728) #24	INPP5E (ENSVVUG00000026975) #25	PMPCA (ENSVVUG00000027003) #26	ENTR1 (ENSVVUG00000027138) #27	SNAPC4 (ENSVVUG00000027148) #28	CARD9 (ENSVVUG00000027169) #29	DNLZ (ENSVVUG00000027171) #30	GPSM1 (ENSVVUG00000027177) #31	ENSVVUG00000027184 #33	QSOX2 (ENSVVUG00000027191) #35	LHX3 (ENSVVUG00000027200) #36	TMEM250 (ENSVVUG00000027207) #37	NACC2 (ENSVVUG00000027208)	UBAC1 (ENSVVUG00000027213)	CAMSAP1 (ENSVVUG00000027215)
Felidae	ANCESTRAL SPECIES	16	ENSGT00390000000529	ENSGT00940000178229	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800.a	ENSGT00530000064194	ENSGT00940000153294.n	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a.m	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570.b #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Panthera	ANCESTRAL SPECIES	11	ENSGT00390000000529	ENSGT00940000178229	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800.a	ENSGT00530000064194	ENSGT00940000153294.n	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a.m	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570.b #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Panthera_a	ANCESTRAL SPECIES	10	ENSGT00390000000529	ENSGT00940000178229	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800.a	ENSGT00530000064194	ENSGT00940000153294.n	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a.m	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570.b #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
lion	MODERN SPECIES	13	CACFD1 (ENSPLOG00000020451)	ENSPLOG00000020419	ENSPLOG00000020374	REXO4 (ENSPLOG00000020344)	STKLD1 (ENSPLOG00000020166)	SURF4 (ENSPLOG00000020111)	ENSPLOG00000020076	SURF1 (ENSPLOG00000020010)	RPL7A (ENSPLOG00000019949)	ENSPLOG00000019895	SURF6 (ENSPLOG00000019851)	ABO (ENSPLOG00000019802)	DIPK1B (ENSPLOG00000019737) #18	AGPAT2 (ENSPLOG00000019691) #19	ENSPLOG00000019622 #20	NOTCH1 (ENSPLOG00000019561) #22	SEC16A (ENSPLOG00000019490) #24	INPP5E (ENSPLOG00000019443) #25	PMPCA (ENSPLOG00000019328) #26	ENTR1 (ENSPLOG00000019090) #27	SNAPC4 (ENSPLOG00000019034) #28	CARD9 (ENSPLOG00000018978) #29	DNLZ (ENSPLOG00000018907) #30	GPSM1 (ENSPLOG00000018756) #31	ENSPLOG00000018664 #33	QSOX2 (ENSPLOG00000018555) #35	LHX3 (ENSPLOG00000018414) #36	TMEM250 (ENSPLOG00000018388) #37	NACC2 (ENSPLOG00000018337)	UBAC1 (ENSPLOG00000018294)	CAMSAP1 (ENSPLOG00000018226)
Cat	MODERN SPECIES	244	CACFD1 (ENSFCAG00000007078)	REXO4 (ENSFCAG00000011652)	ADAMTS13 (ENSFCAG00000026549)	STKLD1 (ENSFCAG00000003766)	SURF4 (ENSFCAG00000043834)	SURF2 (ENSFCAG00000036464)	SURF1 (ENSFCAG00000034840)	RPL7A (ENSFCAG00000044737)	MED22 (ENSFCAG00000005823)	SURF6 (ENSFCAG00000040914)	ENSFCAG00000025873	ENSFCAG00000051617	DIPK1B (ENSFCAG00000046165) #18	AGPAT2 (ENSFCAG00000011607) #19	EGFL7 (ENSFCAG00000011605) #20	NOTCH1 (ENSFCAG00000023517) #22	SEC16A (ENSFCAG00000024359) #24	INPP5E (ENSFCAG00000007225) #25	PMPCA (ENSFCAG00000007223) #26	ENTR1 (ENSFCAG00000007222) #27	SNAPC4 (ENSFCAG00000028095) #28	CARD9 (ENSFCAG00000042261) #29	GPSM1 (ENSFCAG00000007220) #31	ENSFCAG00000045910 #33	QSOX2 (ENSFCAG00000012324) #35	LHX3 (ENSFCAG00000042025) #36	TMEM250 (ENSFCAG00000029518) #37	NACC2 (ENSFCAG00000009352)	UBAC1 (ENSFCAG00000010881)	CAMSAP1 (ENSFCAG00000001822)	KCNT1 (ENSFCAG00000018193)
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT00940000159718	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000164320	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Equus	ANCESTRAL SPECIES	30	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531.qb.b	ENSGT00940000157531.qb.a	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.b.b.b.a.c #17	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b.f.a	ENSGT00940000156880
Horse	MODERN SPECIES	17	BRD3 (ENSECAG00000021276)	WDR5 (ENSECAG00000017389)	RXRA (ENSECAG00000019365)	COL5A1 (ENSECAG00000042356)	ENSECAG00000037647	ENSECAG00000000436	OLFM1 (ENSECAG00000016957)	PPP1R26 (ENSECAG00000038957)	ENSECAG00000029848	MRPS2 (ENSECAG00000048606)	LCN1 (ENSECAG00000032975) ##14	ENSECAG00000029369 #17	DIPK1B (ENSECAG00000005285) #18	AGPAT2 (ENSECAG00000010932) #19	EGFL7 (ENSECAG00000015593) #20	NOTCH1 (ENSECAG00000022405) #22	SEC16A (ENSECAG00000006377) #24	INPP5E (ENSECAG00000019901) #25	PMPCA (ENSECAG00000022206) #26	ENTR1 (ENSECAG00000010463) #27	SNAPC4 (ENSECAG00000015762) #28	CARD9 (ENSECAG00000019300) #29	GPSM1 (ENSECAG00000011306) #31	CCDC187 (ENSECAG00000019156)	QSOX2 (ENSECAG00000020761) #35	LHX3 (ENSECAG00000021983) #36	TMEM250 (ENSECAG00000032576) #37	NACC2 (ENSECAG00000006963)	UBAC1 (ENSECAG00000011717)	CAMSAP1 (ENSECAG00000017095)	KCNT1 (ENSECAG00000003311)
Donkey	MODERN SPECIES	1	BRD3 (ENSEASG00005010664)	WDR5 (ENSEASG00005010670)	RXRA (ENSEASG00005010676)	COL5A1 (ENSEASG00005032204)	ENSEASG00005028080	ENSEASG00005010692	OLFM1 (ENSEASG00005010702)	PPP1R26 (ENSEASG00005010706)	PIERCE1 (ENSEASG00005010708)	MRPS2 (ENSEASG00005010711)	ENSEASG00005027005 ##14	ENSEASG00005031389 #17	DIPK1B (ENSEASG00005038302) #18	AGPAT2 (ENSEASG00005032738) #19	EGFL7 (ENSEASG00005018458) #20	NOTCH1 (ENSEASG00005018445) #22	SEC16A (ENSEASG00005018427) #24	INPP5E (ENSEASG00005018418) #25	PMPCA (ENSEASG00005018411) #26	ENTR1 (ENSEASG00005018403) #27	SNAPC4 (ENSEASG00005018397) #28	CARD9 (ENSEASG00005018392) #29	GPSM1 (ENSEASG00005018385) #31	CCDC187 (ENSEASG00005018375) #33	QSOX2 (ENSEASG00005018337) #35	LHX3 (ENSEASG00005018318) #36	TMEM250 (ENSEASG00005038060) #37	NACC2 (ENSEASG00005018311)	UBAC1 (ENSEASG00005018309)	CAMSAP1 (ENSEASG00005018242)	KCNT1 (ENSEASG00005017622)
Chiroptera	ANCESTRAL SPECIES	8	ENSGT00940000159718	ENSGT01100000266551	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000164320	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Megabat	MODERN SPECIES	1692																NOTCH1 (ENSPVAG00000001360) #22	ENSPVAG00000001356	SEC16A (ENSPVAG00000001353) #24	INPP5E (ENSPVAG00000001351) #25	PMPCA (ENSPVAG00000001350) #26	ENTR1 (ENSPVAG00000001348) #27	SNAPC4 (ENSPVAG00000001344) #28	CARD9 (ENSPVAG00000001342) #29	ENSPVAG00000001341 #30	GPSM1 (ENSPVAG00000001337) #31
Microchiroptera	ANCESTRAL SPECIES	7	ENSGT00940000159718	ENSGT01100000266551	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000164320	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Microbat	MODERN SPECIES	2240																NOTCH1 (ENSMLUG00000005748) #22	SEC16A (ENSMLUG00000009099) #24
Greater horseshoe bat	MODERN SPECIES	3	VAV2 (ENSRFEG00010016972)	ENSRFEG00010017100	BRD3 (ENSRFEG00010017126)	WDR5 (ENSRFEG00010017171)	RXRA (ENSRFEG00010017245)	COL5A1 (ENSRFEG00010017359)	FCN2 (ENSRFEG00010017458)	FCN1 (ENSRFEG00010017568)	OLFM1 (ENSRFEG00010017662)	PPP1R26 (ENSRFEG00010017804)	ENSRFEG00010017815	MRPS2 (ENSRFEG00010017857)	DIPK1B (ENSRFEG00010017916) #18	AGPAT2 (ENSRFEG00010017940) #19	EGFL7 (ENSRFEG00010017996) #20	NOTCH1 (ENSRFEG00010018099) #22	SEC16A (ENSRFEG00010018245) #24	INPP5E (ENSRFEG00010019803) #25	PMPCA (ENSRFEG00010019835) #26	ENSRFEG00010019890 #27	SNAPC4 (ENSRFEG00010019951) #28	CARD9 (ENSRFEG00010020007) #29	DNLZ (ENSRFEG00010020087) #30	GPSM1 (ENSRFEG00010020133) #31	ENSRFEG00010020285 #33	ENSRFEG00010020365 #35	LHX3 (ENSRFEG00010020399) #36	TMEM250 (ENSRFEG00010020471) #37	NACC2 (ENSRFEG00010020485)	UBAC1 (ENSRFEG00010020506)	CAMSAP1 (ENSRFEG00010020547)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157157.b #22
Hedgehog	MODERN SPECIES	4471																NOTCH1 (ENSEEUG00000012153) #22
Common shrew	MODERN SPECIES	3421																ENSSARG00000001648 #22
Atlantogenata	ANCESTRAL SPECIES	97	ENSGT00390000000529	ENSGT00940000158379	ENSGT00940000159607	ENSGT00390000018038	ENSGT00530000064123	ENSGT00390000016800	ENSGT00530000064194	ENSGT00940000155193.a.a	ENSGT00940000153294.m.a	ENSGT00390000004339	ENSGT00390000006980	ENSGT00950000182858.A.a.a	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00530000065015 #33	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Afrotheria	ANCESTRAL SPECIES	199						ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22
Tenrec	MODERN SPECIES	4319																ENSETEG00000011395 #22
Afrotheria_a	ANCESTRAL SPECIES	198						ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22
Elephant	MODERN SPECIES	138							ENSLAFG00000009931	ENSLAFG00000031547	ENSLAFG00000030528	OLFM1 (ENSLAFG00000016866)	ENSLAFG00000029433	PIERCE1 (ENSLAFG00000029858)	MRPS2 (ENSLAFG00000023206)	AGPAT2 (ENSLAFG00000022707) #19	EGFL7 (ENSLAFG00000025873) #20	ENSLAFG00000022253 #22
Hyrax	MODERN SPECIES	3613																NOTCH1 (ENSPCAG00000008013) #22
Xenarthra	ANCESTRAL SPECIES	1032																ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27
Armadillo	MODERN SPECIES	1747																NOTCH1 (ENSDNOG00000014374) #22	SEC16A (ENSDNOG00000047209) #24	ENSDNOG00000041303	INPP5E (ENSDNOG00000007074) #25	PMPCA (ENSDNOG00000036519) #26	ENTR1 (ENSDNOG00000014677) #27
Marsupialia	ANCESTRAL SPECIES	18	ENSGT00940000157589	ENSGT00940000159718	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.f.c.a	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00970000198057	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Opossum	MODERN SPECIES		ENSMODG00000029665	BRD3OS (ENSMODG00000047757)	BRD3 (ENSMODG00000013121)	ENSMODG00000039911	ENSMODG00000013131	RXRA (ENSMODG00000013136)	COL5A1 (ENSMODG00000013206)	ENSMODG00000013212	OLFM1 (ENSMODG00000013220)	ENSMODG00000017610	PIERCE1 (ENSMODG00000023305)	MRPS2 (ENSMODG00000049197)	DIPK1B (ENSMODG00000017604) #18	AGPAT2 (ENSMODG00000017601) #19	EGFL7 (ENSMODG00000017598) #20	NOTCH1 (ENSMODG00000017591) #22	SEC16A (ENSMODG00000017583) #24	INPP5E (ENSMODG00000017574) #25	PMPCA (ENSMODG00000017572) #26	ENSMODG00000017568 #27	ENSMODG00000017566 #28	ENSMODG00000017562 #29	ENSMODG00000017560 #30	ENSMODG00000039302 #31	ENSMODG00000050735 #31	ENSMODG00000038220	QSOX2 (ENSMODG00000017555) #35	LHX3 (ENSMODG00000017549) #36	TMEM250 (ENSMODG00000043203) #37	NACC2 (ENSMODG00000017546)	UBAC1 (ENSMODG00000017540)
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000157589	ENSGT00940000159718	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.f.c.a	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00970000198057	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000157589	ENSGT00940000159718	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.f.c.a	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00970000198057	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000157589	ENSGT00940000159718	ENSGT01030000235088	ENSGT00940000153385.b.a.a	ENSGT00940000154143.f.c.a	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT00390000006452.b.a #18	ENSGT00390000008726.h.a #19	ENSGT00940000160015 #20	ENSGT00940000157157.b #22	ENSGT00940000159324 #24	ENSGT00940000158199 #25	ENSGT00940000156724 #26	ENSGT00390000000560 #27	ENSGT00940000160404 #28	ENSGT00940000160570 #29	ENSGT00390000008220 #30	ENSGT00940000154667.a #31	ENSGT00970000198057	ENSGT00940000159734 #35	ENSGT00940000160316 #36	ENSGT00560000078707 #37	ENSGT00940000159244	ENSGT00390000014658	ENSGT00950000182975.a.a.b
Common wonbat	MODERN SPECIES	1030	DBH (ENSVURG00010012023)	SARDH (ENSVURG00010010680)	VAV2 (ENSVURG00010007291)	ENSVURG00010007182	BRD3OS (ENSVURG00010007179)	BRD3 (ENSVURG00010007166)	ENSVURG00010007153	RXRA (ENSVURG00010007139)	ENSVURG00010007096	OLFM1 (ENSVURG00010007068)	PIERCE1 (ENSVURG00010007054)	MRPS2 (ENSVURG00010007050)	DIPK1B (ENSVURG00010007015) #18	AGPAT2 (ENSVURG00010007005) #19	EGFL7 (ENSVURG00010006989) #20	NOTCH1 (ENSVURG00010006963) #22	SEC16A (ENSVURG00010006894) #24	INPP5E (ENSVURG00010006875) #25	PMPCA (ENSVURG00010006867) #26	ENTR1 (ENSVURG00010006861) #27	ENSVURG00010006845 #28	CARD9 (ENSVURG00010006823) #29	DNLZ (ENSVURG00010006809) #30	GPSM1 (ENSVURG00010006793) #31	QSOX2 (ENSVURG00010006739) #35	LHX3 (ENSVURG00010006715) #36	TMEM250 (ENSVURG00010006706) #37	NACC2 (ENSVURG00010006696)	UBAC1 (ENSVURG00010006680)	CAMSAP1 (ENSVURG00010006656)	ENSVURG00010006640
koala	MODERN SPECIES	11	SARDH (ENSPCIG00000017392)	VAV2 (ENSPCIG00000017397)	BRD3OS (ENSPCIG00000035436)	BRD3 (ENSPCIG00000003877)	ENSPCIG00000003893	RXRA (ENSPCIG00000003937)	COL5A1 (ENSPCIG00000018809)	FCN1 (ENSPCIG00000018798)	OLFM1 (ENSPCIG00000013143)	ENSPCIG00000019523	PIERCE1 (ENSPCIG00000019524)	MRPS2 (ENSPCIG00000019526)	DIPK1B (ENSPCIG00000019537) #18	AGPAT2 (ENSPCIG00000019541) #19	EGFL7 (ENSPCIG00000019543) #20	NOTCH1 (ENSPCIG00000019548) #22	SEC16A (ENSPCIG00000019553) #24	INPP5E (ENSPCIG00000019557) #25	PMPCA (ENSPCIG00000005138) #26	ENTR1 (ENSPCIG00000005134) #27	ENSPCIG00000005109 #28	CARD9 (ENSPCIG00000005076) #29	DNLZ (ENSPCIG00000005062) #30	GPSM1 (ENSPCIG00000005041) #31	ENSPCIG00000004981	QSOX2 (ENSPCIG00000004967) #35	LHX3 (ENSPCIG00000004932) #36	TMEM250 (ENSPCIG00000004918) #37	NACC2 (ENSPCIG00000004901)	UBAC1 (ENSPCIG00000004863)	CAMSAP1 (ENSPCIG00000010728)
Wallaby	MODERN SPECIES	5521																ENSMEUG00000010382 #22
Tasmanian devil	MODERN SPECIES	1	SARDH (ENSSHAG00000009720)	VAV2 (ENSSHAG00000010676)	BRD3 (ENSSHAG00000013594)	ENSSHAG00000013955	RXRA (ENSSHAG00000027189)	ENSSHAG00000032137	COL5A1 (ENSSHAG00000016990)	ENSSHAG00000017399	OLFM1 (ENSSHAG00000017758)	ENSSHAG00000025592	PIERCE1 (ENSSHAG00000022813)	ENSSHAG00000018437	ENSSHAG00000018467 #18	AGPAT2 (ENSSHAG00000001932) #19	EGFL7 (ENSSHAG00000000194) #20	NOTCH1 (ENSSHAG00000004931) #22	INPP5E (ENSSHAG00000006287) #25	SEC16A (ENSSHAG00000030073) #24	ENSSHAG00000007346 #26	ENSSHAG00000024780 #28	ENTR1 (ENSSHAG00000007540) #27	CARD9 (ENSSHAG00000008199) #29	DNLZ (ENSSHAG00000020982) #30	GPSM1 (ENSSHAG00000008958) #31	ENSSHAG00000029030	QSOX2 (ENSSHAG00000030872) #35	LHX3 (ENSSHAG00000011489) #36	TMEM250 (ENSSHAG00000026159) #37	NACC2 (ENSSHAG00000029658)	UBAC1 (ENSSHAG00000014335)	CAMSAP1 (ENSSHAG00000001238)
Platypus	MODERN SPECIES	15	VAV2 (ENSOANG00000002845)	SARDH (ENSOANG00000002843)	ENSOANG00000002844	BRD3OS (ENSOANG00000042033)	BRD3 (ENSOANG00000002847)	WDR5B (ENSOANG00000003913)	RXRA (ENSOANG00000003910)	COL5A1 (ENSOANG00000003903)	OLFM1 (ENSOANG00000003901)	ENSOANG00000047966	ENSOANG00000051055	MRPS2 (ENSOANG00000038335)	DIPK1B (ENSOANG00000005830) #18	AGPAT2 (ENSOANG00000047681) #19	EGFL7 (ENSOANG00000049304) #20	NOTCH1 (ENSOANG00000002526) #22	SEC16A (ENSOANG00000002527) #24	INPP5E (ENSOANG00000028971) #25	PMPCA (ENSOANG00000013025) #26	ENTR1 (ENSOANG00000042459) #27	ENSOANG00000038543 #28	CARD9 (ENSOANG00000000626) #29	ENSOANG00000013456 #30	GPSM1 (ENSOANG00000013454) #31	ENSOANG00000038429	QSOX2 (ENSOANG00000002658) #35	LHX3 (ENSOANG00000045180) #36	TMEM250 (ENSOANG00000043789) #37	NACC2 (ENSOANG00000005894)	UBAC1 (ENSOANG00000005895)	CAMSAP1 (ENSOANG00000005896)