Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00960000190376	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.C ##27	ENSGT00950000183145.D ##27	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000162108.sb.b #31	ENSGT00940000165716	ENSGT00940000154525.b.a #32	ENSGT00940000163005	ENSGT00390000017384 #34	ENSGT00390000017554 #35
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00960000190376	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.D ##27	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000162108.sb.b #31	ENSGT00940000165716	ENSGT00940000154525.b.a #32	ENSGT00940000163005	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00960000190376	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.D ##27	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000162108.sb.b #31	ENSGT00940000165716	ENSGT00940000154525.b.a #32	ENSGT00940000163005.b	ENSGT00940000163005.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00960000190376	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00390000005511 #28	ENSGT00950000183145.E #27	ENSGT00940000163882	ENSGT00940000162108.tb #30	ENSGT00940000165716	ENSGT00940000154525.b.a #32	ENSGT00940000163005.b	ENSGT00390000017384 #34	ENSGT00940000163005.a	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392
Carnivora	ANCESTRAL SPECIES	16	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.D ##27	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.b #31	ENSGT00940000154525.b.a #32	ENSGT00940000163005.b	ENSGT00390000017384.hb #34	ENSGT00940000163005.a	ENSGT00390000017384.ib ##34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37
Caniformia	ANCESTRAL SPECIES	13	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.D ##27	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.b #31	ENSGT00940000154525.b.a #32	ENSGT00940000163005.b	ENSGT00390000017384.hb #34	ENSGT00940000163005.a	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286
Canidae	ANCESTRAL SPECIES	16	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000163657 #13	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.D ##27	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.b #31	ENSGT00940000154525.b.a #32	ENSGT00940000163005.b	ENSGT00390000017384.hb.f #34	ENSGT00390000017384.hb.e #33	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00390000004380.e.a.a #12	ENSGT00940000163657.f #13	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E.kb.b ##27	ENSGT00950000183145.E.kb.a #26	ENSGT00950000183145.B.a.b ##27	ENSGT00950000183145.E.lb #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.b #31	ENSGT00940000154525.b.a #32	ENSGT00940000163005.b	ENSGT00390000017384.hb.f #34	ENSGT00390000017384.hb.e #33	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37
Dingo	MODERN SPECIES	165	TIAL1 (ENSCAFG00020013891) #7	BAG3 (ENSCAFG00020013893) #8	INPP5F (ENSCAFG00020013935) #9	MCMBP (ENSCAFG00020014655) #10	SEC23IP (ENSCAFG00020014659) #11	ENSCAFG00020014663 #12	ENSCAFG00020014666 #13	PLPP4 (ENSCAFG00020014668) #14	WDR11 (ENSCAFG00020014683) #15	FGFR2 (ENSCAFG00020014779) #16	ATE1 (ENSCAFG00020014791) #17	ENSCAFG00020014813 #18	ENSCAFG00020014819 #19	TACC2 (ENSCAFG00020014827) #20	BTBD16 (ENSCAFG00020015057) #21	PLEKHA1 (ENSCAFG00020015085) #22	HTRA1 (ENSCAFG00020015096) #23	ENSCAFG00020015148 #24	ENSCAFG00020015160 #25	ENSCAFG00020015167 #26	ENSCAFG00020015171 #27	C10orf120 (ENSCAFG00020015180) #28	ENSCAFG00020015184 #29	ENSCAFG00020015187 #30	ENSCAFG00020015189 #31	CUZD1 (ENSCAFG00020015193) #32	ENSCAFG00020015197 #33	ENSCAFG00020015204 #34	PSTK (ENSCAFG00020015208) #35	IKZF5 (ENSCAFG00020015212) #36	ACADSB (ENSCAFG00020015216) #37
Dog	MODERN SPECIES	20	TIAL1 (ENSCAFG00845016533) #7	BAG3 (ENSCAFG00845016933) #8	SEC23IP (ENSCAFG00845017286) #9	MCMBP (ENSCAFG00845017945) #10	SEC23IP (ENSCAFG00845018243) #11	ENSCAFG00845018569 #12	ENSCAFG00845018618 #13	PLPP4 (ENSCAFG00845018703) #14	WDR11 (ENSCAFG00845018912) #15	FGFR2 (ENSCAFG00845019372) #16	ATE1 (ENSCAFG00845020272) #17	ATE1OS (ENSCAFG00845020507) #18	NSMCE4A (ENSCAFG00845020544) #19	TACC2 (ENSCAFG00845020783) #20	BTBD16 (ENSCAFG00845021873) #21	PLEKHA1 (ENSCAFG00845022104) #22	HTRA1 (ENSCAFG00845022222) #23	ENSCAFG00845022418 ##27	ENSCAFG00845023612 #26	ENSCAFG00845023643 ##27	C10orf120 (ENSCAFG00845023695) #28	ENSCAFG00845023783 #30	CUZD1 (ENSCAFG00845024055) #32	ENSCAFG00845024126	ENSCAFG00845024159 #34	ENSCAFG00845024221 #33	PSTK (ENSCAFG00845024287) #35	IKZF5 (ENSCAFG00845024334) #36	ACADSB (ENSCAFG00845024388) #37	HMX3 (ENSCAFG00845024473)	HMX2 (ENSCAFG00845024515)
Red fox	MODERN SPECIES		TIAL1 (ENSVVUG00000011029) #7	BAG3 (ENSVVUG00000011045) #8	INPP5F (ENSVVUG00000011092) #9	MCMBP (ENSVVUG00000011144) #10	SEC23IP (ENSVVUG00000011215) #11	ENSVVUG00000011255 #13	PLPP4 (ENSVVUG00000011275) #14	ENSVVUG00000011295	WDR11 (ENSVVUG00000011299) #15	FGFR2 (ENSVVUG00000011385) #16	ATE1 (ENSVVUG00000011469) #17	ENSVVUG00000011488 #18	NSMCE4A (ENSVVUG00000011499) #19	TACC2 (ENSVVUG00000011536) #20	BTBD16 (ENSVVUG00000011562) #21	PLEKHA1 (ENSVVUG00000011580) #22	HTRA1 (ENSVVUG00000011603) #23	ENSVVUG00000011630 ##27	ENSVVUG00000011639 #27	ENSVVUG00000011643 #27
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00390000017384.hb #34	ENSGT00940000163005.a	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a
Mustelinae	ANCESTRAL SPECIES	40	ENSGT00940000153430.a.b	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00940000163882	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00390000017384.hb #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a	ENSGT00940000156414
Ferret	MODERN SPECIES	193	BAG3 (ENSMPUG00000003057) #8	INPP5F (ENSMPUG00000003046) #9	MCMBP (ENSMPUG00000003036) #10	SEC23IP (ENSMPUG00000003023) #11	PLPP4 (ENSMPUG00000003005) #14	WDR11 (ENSMPUG00000002997) #15	ENSMPUG00000002994	FGFR2 (ENSMPUG00000002989) #16	ENSMPUG00000002985	ENSMPUG00000002979	ATE1 (ENSMPUG00000002968) #17	NSMCE4A (ENSMPUG00000002960) #19	ENSMPUG00000002953 #20	ENSMPUG00000002944 #20	BTBD16 (ENSMPUG00000002903) #21	PLEKHA1 (ENSMPUG00000002899) #22	HTRA1 (ENSMPUG00000002895) #23	ENSMPUG00000002892 #27	ENSMPUG00000002887	C10orf120 (ENSMPUG00000002881) #28	ENSMPUG00000002877	ENSMPUG00000002820 #30	CUZD1 (ENSMPUG00000002814) #32	ENSMPUG00000019258	ENSMPUG00000002809 #34	ENSMPUG00000002801 #34	PSTK (ENSMPUG00000002790) #35	IKZF5 (ENSMPUG00000002786) #36	ACADSB (ENSMPUG00000002783) #37	HMX3 (ENSMPUG00000002780)	HMX2 (ENSMPUG00000002778)
American mink	MODERN SPECIES	35	GRK5 (ENSNVIG00000005095)	RGS10 (ENSNVIG00000005120)	TIAL1 (ENSNVIG00000005133) #7	BAG3 (ENSNVIG00000005182) #8	INPP5F (ENSNVIG00000005245) #9	MCMBP (ENSNVIG00000005366) #10	SEC23IP (ENSNVIG00000005465) #11	PLPP4 (ENSNVIG00000005960) #14	ENSNVIG00000005981	WDR11 (ENSNVIG00000006011) #15	FGFR2 (ENSNVIG00000006193) #16	ATE1 (ENSNVIG00000006880) #17	NSMCE4A (ENSNVIG00000006954) #19	TACC2 (ENSNVIG00000006963) #20	BTBD16 (ENSNVIG00000007104) #21	PLEKHA1 (ENSNVIG00000007135) #22	HTRA1 (ENSNVIG00000007206) #23	ENSNVIG00000007221 #27	C10orf120 (ENSNVIG00000007718) #28	CUZD1 (ENSNVIG00000007746) #32	ENSNVIG00000007783 #34	PSTK (ENSNVIG00000007798) #35	IKZF5 (ENSNVIG00000007802) #36	ACADSB (ENSNVIG00000007815) #37	HMX3 (ENSNVIG00000007846)	HMX2 (ENSNVIG00000007861)	BUB3 (ENSNVIG00000007873)	GPR26 (ENSNVIG00000007954)	CPXM2 (ENSNVIG00000007971)	CHSTF (ENSNVIG00000008037)	OAT (ENSNVIG00000008116)
Ursidae	ANCESTRAL SPECIES	5	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000166528.a.a	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955.d #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00390000017384.hb #34	ENSGT00940000163005.a	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a
Giant Panda	MODERN SPECIES	16	RGS10 (ENSAMEG00000010141)	TIAL1 (ENSAMEG00000010147) #7	BAG3 (ENSAMEG00000010175) #8	INPP5F (ENSAMEG00000010186) #9	MCMBP (ENSAMEG00000010208) #10	ENSAMEG00000001122	SEC23IP (ENSAMEG00000010251) #11	PLPP4 (ENSAMEG00000010299) #14	WDR11 (ENSAMEG00000010302) #15	FGFR2 (ENSAMEG00000010959) #16	ATE1 (ENSAMEG00000010918) #17	ENSAMEG00000010913 #18	NSMCE4A (ENSAMEG00000010897) #19	TACC2 (ENSAMEG00000010858) #20	BTBD16 (ENSAMEG00000010849) #21	PLEKHA1 (ENSAMEG00000024104) #22	HTRA1 (ENSAMEG00000024939) #23	ENSAMEG00000008992 #27	ENSAMEG00000004692 #28	ENSAMEG00000004685 #34	ENSAMEG00000030562	ENSAMEG00000004671 #35	ENSAMEG00000004665 #36	ACADSB (ENSAMEG00000004639) #37	HMX3 (ENSAMEG00000024653)	HMX2 (ENSAMEG00000009520)	BUB3 (ENSAMEG00000009521)	GPR26 (ENSAMEG00000009542)	CPXM2 (ENSAMEG00000009550)	CHST15 (ENSAMEG00000010183)	OAT (ENSAMEG00000010160)
Ursus	ANCESTRAL SPECIES	7	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000166528.a.a	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955.d #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000154525.b.a #32	ENSGT00390000017384.hb.b #34	ENSGT00390000017384.hb.a #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a
American black bear	MODERN SPECIES	812													ENSUAMG00000018234 #20	ENSUAMG00000018235 #20	BTBD16 (ENSUAMG00000018236) #21	PLEKHA1 (ENSUAMG00000018237) #22	HTRA1 (ENSUAMG00000018238) #23	ENSUAMG00000018239 #27
Polar bear	MODERN SPECIES	92	BAG3 (ENSUMAG00000003213) #8	INPP5F (ENSUMAG00000003243) #9	MCMBP (ENSUMAG00000003425) #10	ENSUMAG00000003871	SEC23IP (ENSUMAG00000003896) #11	PLPP4 (ENSUMAG00000004036) #14	ENSUMAG00000004063	WDR11 (ENSUMAG00000004075) #15	ENSUMAG00000004111 #16	ENSUMAG00000004366 #16	ATE1 (ENSUMAG00000004457) #17	ENSUMAG00000004468 #18	NSMCE4A (ENSUMAG00000004478) #19	TACC2 (ENSUMAG00000004546) #20	BTBD16 (ENSUMAG00000004944) #21	PLEKHA1 (ENSUMAG00000004973) #22	HTRA1 (ENSUMAG00000004978) #23	ENSUMAG00000004981 #27	ENSUMAG00000004990 #27	C10orf120 (ENSUMAG00000005005) #28	ENSUMAG00000005031 #30	ENSUMAG00000005147	CUZD1 (ENSUMAG00000005153) #32	ENSUMAG00000005171 #34	ENSUMAG00000005180 #34	PSTK (ENSUMAG00000005193) #35	IKZF5 (ENSUMAG00000005198) #36	ACADSB (ENSUMAG00000005207) #37	BUB3 (ENSUMAG00000005215)	CPXM2 (ENSUMAG00000005241)	CHST15 (ENSUMAG00000005326)
Felidae	ANCESTRAL SPECIES	14	ENSGT00940000153430.a.b	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005.b	ENSGT00390000017384.ib ##34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a	ENSGT00940000156414
Panthera	ANCESTRAL SPECIES	8	ENSGT00940000153430.a.b	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005.b	ENSGT00390000017384.ib ##34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a	ENSGT00940000156414
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00940000153430.a.b	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005.b	ENSGT00390000017384.ib.c ##34	ENSGT00390000017384.ib.d ##34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a	ENSGT00940000156414
lion	MODERN SPECIES	11	GRK5 (ENSPLOG00000021943)	RGS10 (ENSPLOG00000021912)	TIAL1 (ENSPLOG00000021852) #7	BAG3 (ENSPLOG00000021815) #8	INPP5F (ENSPLOG00000021703) #9	MCMBP (ENSPLOG00000021644) #10	SEC23IP (ENSPLOG00000021541) #11	PLPP4 (ENSPLOG00000021510) #14	WDR11 (ENSPLOG00000021477) #15	FGFR2 (ENSPLOG00000020164) #16	ATE1 (ENSPLOG00000019598) #17	NSMCE4A (ENSPLOG00000019528) #19	ENSPLOG00000019457 #20	ENSPLOG00000018655 #20	BTBD16 (ENSPLOG00000018372) #21	PLEKHA1 (ENSPLOG00000018098) #22	HTRA1 (ENSPLOG00000017957) #23	C10orf120 (ENSPLOG00000017895) #28	ENSPLOG00000016884 #30	CUZD1 (ENSPLOG00000016651) #32	ENSPLOG00000016623	ENSPLOG00000016571 ##34	ENSPLOG00000016528 ##34	PSTK (ENSPLOG00000016472) #35	IKZF5 (ENSPLOG00000016444) #36	ACADSB (ENSPLOG00000016393) #37	HMX3 (ENSPLOG00000016360)	HMX2 (ENSPLOG00000016327)	BUB3 (ENSPLOG00000016227)	GPR26 (ENSPLOG00000016174)	CPXM2 (ENSPLOG00000016053)
leopard	MODERN SPECIES	33	GRK5 (ENSPPRG00000005052)	RGS10 (ENSPPRG00000003836)	TIAL1 (ENSPPRG00000003226) #7	BAG3 (ENSPPRG00000002763) #8	INPP5F (ENSPPRG00000002675) #9	MCMBP (ENSPPRG00000001647) #10	SEC23IP (ENSPPRG00000022653) #11	PLPP4 (ENSPPRG00000023280) #14	WDR11 (ENSPPRG00000021913) #15	ENSPPRG00000017103 #16	ENSPPRG00000011499 #16	ATE1 (ENSPPRG00000009731) #17	NSMCE4A (ENSPPRG00000007618) #19	ENSPPRG00000007110 #20	BTBD16 (ENSPPRG00000003961) #21	PLEKHA1 (ENSPPRG00000003604) #22	HTRA1 (ENSPPRG00000002826) #23
Tiger	MODERN SPECIES	210	GRK5 (ENSPTIG00000021829)	RGS10 (ENSPTIG00000006086)	TIAL1 (ENSPTIG00000007899) #7	BAG3 (ENSPTIG00000009763) #8	INPP5F (ENSPTIG00000011407) #9	MCMBP (ENSPTIG00000014781) #10	SEC23IP (ENSPTIG00000017676) #11	PLPP4 (ENSPTIG00000018990) #14	WDR11 (ENSPTIG00000001166) #15	ENSPTIG00000007977 #16	ENSPTIG00000021238 #16	ATE1 (ENSPTIG00000021995) #17	NSMCE4A (ENSPTIG00000022082) #19	ENSPTIG00000022110 #20	BTBD16 (ENSPTIG00000014571) #21	PLEKHA1 (ENSPTIG00000015102) #22	ENSPTIG00000018456 #23	ENSPTIG00000019475 #27	C10orf120 (ENSPTIG00000021374) #28	ENSPTIG00000003767 #30	CUZD1 (ENSPTIG00000005962) #32	ENSPTIG00000007416
Cat	MODERN SPECIES	242	PRDX3 (ENSFCAG00000010659)	GRK5 (ENSFCAG00000010660)	RGS10 (ENSFCAG00000026725)	TIAL1 (ENSFCAG00000031690) #7	BAG3 (ENSFCAG00000023182) #8	INPP5F (ENSFCAG00000024040) #9	MCMBP (ENSFCAG00000014907) #10	SEC23IP (ENSFCAG00000014908) #11	PLPP4 (ENSFCAG00000042026) #14	WDR11 (ENSFCAG00000014314) #15	FGFR2 (ENSFCAG00000003692) #16	ATE1 (ENSFCAG00000027935) #17	TACC2 (ENSFCAG00000026479) #20	NSMCE4A (ENSFCAG00000003647) #19	BTBD16 (ENSFCAG00000003652) #21	PLEKHA1 (ENSFCAG00000023664) #22	HTRA1 (ENSFCAG00000003656) #23	ENSFCAG00000048419	ENSFCAG00000047757	ENSFCAG00000003657 #27	ENSFCAG00000026044 #30	C10orf120 (ENSFCAG00000035584) #28	ENSFCAG00000029545 #32	ENSFCAG00000041375	ENSFCAG00000007571 ##34	ENSFCAG00000030445 ##34	PSTK (ENSFCAG00000027434) #35	IKZF5 (ENSFCAG00000041709) #36	ACADSB (ENSFCAG00000003421) #37	ENSFCAG00000048422	HMX3 (ENSFCAG00000041528)
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00960000190376	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000165716	ENSGT00940000154525.b.a #32	ENSGT00940000163005.b	ENSGT00390000017384 #34	ENSGT00940000163005.a	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392
Equus	ANCESTRAL SPECIES	9	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00960000190376	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00390000012112.e	ENSGT00390000012112.f	ENSGT00390000005511 #28	ENSGT00950000183145.E #27	ENSGT00940000162108.tb #30	ENSGT00940000165716	ENSGT00940000154525.b.a #32	ENSGT00940000163005.b.a	ENSGT00940000163005.b.b	ENSGT00390000017384.kb #34	ENSGT00940000163005.a	ENSGT00390000017384.jb #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36
Donkey	MODERN SPECIES	11	RGS10 (ENSEASG00005038309)	TIAL1 (ENSEASG00005014449) #7	BAG3 (ENSEASG00005014448) #8	INPP5F (ENSEASG00005014445) #9	ENSEASG00005038260	MCMBP (ENSEASG00005014444) #10	SEC23IP (ENSEASG00005014443) #11	PLPP4 (ENSEASG00005014441) #14	WDR11 (ENSEASG00005014435) #15	FGFR2 (ENSEASG00005014428) #16	ATE1 (ENSEASG00005014421) #17	ENSEASG00005014414 #18	NSMCE4A (ENSEASG00005014412) #19	TACC2 (ENSEASG00005014393) #20	BTBD16 (ENSEASG00005037072) #21	PLEKHA1 (ENSEASG00005014376) #22	ENSEASG00005014375 #23	ENSEASG00005014371	ENSEASG00005034128	ENSEASG00005035091 #27	ENSEASG00005024831	C10orf120 (ENSEASG00005033462) #28	ENSEASG00005037253 #27	ENSEASG00005013472 #30	ENSEASG00005032296	CUZD1 (ENSEASG00005013476) #32	ENSEASG00005028447	ENSEASG00005032712 #34	ENSEASG00005013481	ENSEASG00005013480 #34	PSTK (ENSEASG00005013485) #35
Horse	MODERN SPECIES		ENSECAG00000035538	GRK5 (ENSECAG00000023764)	RGS10 (ENSECAG00000023632)	TIAL1 (ENSECAG00000009970) #7	ENSECAG00000032636	INPP5F (ENSECAG00000014941) #9	MCMBP (ENSECAG00000015061) #10	SEC23IP (ENSECAG00000000536) #11	PLPP4 (ENSECAG00000023526) #14	WDR11 (ENSECAG00000019673) #15	FGFR2 (ENSECAG00000013960) #16	ATE1 (ENSECAG00000012383) #17	NSMCE4A (ENSECAG00000016651) #19	BTBD16 (ENSECAG00000008814) #21	TACC2 (ENSECAG00000018280) #20	PLEKHA1 (ENSECAG00000014908) #22	HTRA1 (ENSECAG00000009990) #23	ENSECAG00000009596	ENSECAG00000060192 ##27	ENSECAG00000006313	ENSECAG00000046082	C1H10orf120 (ENSECAG00000002143) #28	ENSECAG00000009186 #27	ENSECAG00000019510 #30	ENSECAG00000014886	CUZD1 (ENSECAG00000014944) #32	ENSECAG00000013380 #34	ENSECAG00000040992	ENSECAG00000012505 #34	PSTK (ENSECAG00000011238) #35	IKZF5 (ENSECAG00000006987) #36
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447.r #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00940000163882	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005.b	ENSGT00390000017384 #34	ENSGT00940000163005.a	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a
Megabat	MODERN SPECIES	838															BTBD16 (ENSPVAG00000006854) #21	PLEKHA1 (ENSPVAG00000006862) #22	HTRA1 (ENSPVAG00000006867) #23
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447.r #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00940000163882	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a	ENSGT00940000156414
Microbat	MODERN SPECIES	254																ENSMLUG00000005474 #22
Greater horseshoe bat	MODERN SPECIES	7	GRK5 (ENSRFEG00010012799)	RGS10 (ENSRFEG00010012645)	TIAL1 (ENSRFEG00010012554) #7	BAG3 (ENSRFEG00010012499) #8	INPP5F (ENSRFEG00010012275) #9	MCMBP (ENSRFEG00010012192) #10	SEC23IP (ENSRFEG00010012086) #11	PLPP4 (ENSRFEG00010011968) #14	WDR11 (ENSRFEG00010011888) #15	FGFR2 (ENSRFEG00010011408) #16	ATE1 (ENSRFEG00010011030) #17	ENSRFEG00010010986 #18	NSMCE4A (ENSRFEG00010010935) #19	TACC2 (ENSRFEG00010010381) #20	BTBD16 (ENSRFEG00010010148) #21	PLEKHA1 (ENSRFEG00010010055) #22	HTRA1 (ENSRFEG00010010004) #23	ENSRFEG00010009865 #27	C10orf120 (ENSRFEG00010009794) #28	ENSRFEG00010009653 #30	CUZD1 (ENSRFEG00010009612) #32	ENSRFEG00010009592 #34	ENSRFEG00010009483 #34	PSTK (ENSRFEG00010009389) #35	IKZF5 (ENSRFEG00010009357) #36	ENSRFEG00010009328 #37	HMX3 (ENSRFEG00010009301)	HMX2 (ENSRFEG00010009282)	BUB3 (ENSRFEG00010009105)	GPR26 (ENSRFEG00010009057)	CPXM2 (ENSRFEG00010009013)
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112.c	ENSGT00390000012112.d	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000163005.b	ENSGT00940000163005.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a
Suina	ANCESTRAL SPECIES	6	ENSGT00940000153430.a.b	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112.c.f	ENSGT00390000012112.d	ENSGT00390000012112.c.e.a	ENSGT00390000012112.c.e.b	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000163005.b	ENSGT00940000163005.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286
Chacoan peccary	MODERN SPECIES	955	GRK5 (ENSCWAG00000018519)	RGS10 (ENSCWAG00000018430)	TIAL1 (ENSCWAG00000018390) #7	BAG3 (ENSCWAG00000018369) #8	INPP5F (ENSCWAG00000018266) #9	MCMBP (ENSCWAG00000018167) #10	SEC23IP (ENSCWAG00000018097) #11	PLPP4 (ENSCWAG00000018014) #14	ENSCWAG00000017992	WDR11 (ENSCWAG00000017961) #15	FGFR2 (ENSCWAG00000013844) #16	ATE1 (ENSCWAG00000013413) #17	NSMCE4A (ENSCWAG00000013284) #19	ENSCWAG00000011139 #20	BTBD16 (ENSCWAG00000010937) #21	PLEKHA1 (ENSCWAG00000010671) #22	HTRA1 (ENSCWAG00000010613) #23	ENSCWAG00000010416	ENSCWAG00000010366	ENSCWAG00000010277	ENSCWAG00000009916	C10orf120 (ENSCWAG00000009823) #28	ENSCWAG00000009129 #27	ENSCWAG00000009087	C10orf88 (ENSCWAG00000018230) #34	PSTK (ENSCWAG00000018180) #35	IKZF5 (ENSCWAG00000018145) #36	ACADSB (ENSCWAG00000018050) #37	HMX3 (ENSCWAG00000018030)	HMX2 (ENSCWAG00000018003)	BUB3 (ENSCWAG00000017831)
Pig	MODERN SPECIES	5	TIAL1 (ENSSSCG00000010685) #7	BAG3 (ENSSSCG00000010686) #8	INPP5F (ENSSSCG00000010687) #9	MCMBP (ENSSSCG00000010688) #10	ENSSSCG00000056743	SEC23IP (ENSSSCG00000010690) #11	PLPP4 (ENSSSCG00000010691) #14	WDR11 (ENSSSCG00000010692) #15	ENSSSCG00000041462	FGFR2 (ENSSSCG00000010698) #16	ATE1 (ENSSSCG00000010699) #17	ENSSSCG00000057767	NSMCE4A (ENSSSCG00000010700) #19	TACC2 (ENSSSCG00000037530) #20	BTBD16 (ENSSSCG00000010701) #21	PLEKHA1 (ENSSSCG00000010702) #22	HTRA1 (ENSSSCG00000010703) #23	ENSSSCG00000055799 #27	ENSSSCG00000049231	AWN (ENSSSCG00000002980)	ENSSSCG00000021947	PSP-II (ENSSSCG00000061335)	PSP-I (ENSSSCG00000002978)	SPMI (ENSSSCG00000002977)	C14H10orf120 (ENSSSCG00000010717) #28	ENSSSCG00000010718 #30	ENSSSCG00000049267 #30	ENSSSCG00000051569	ENSSSCG00000010719 #34	ENSSSCG00000058782	ENSSSCG00000023865 #34
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000166688	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112.c	ENSGT00390000012112.d	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000163005.b	ENSGT00940000163005.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000166688	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112.c	ENSGT00390000012112.d	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000163005.b	ENSGT00940000163005.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a
Cetacea	ANCESTRAL SPECIES	15	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000166688.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a	ENSGT00940000156414	ENSGT00390000004719	ENSGT00940000154277.a.b.b.m.a.b	ENSGT00630000089895	ENSGT00940000162535
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00940000166688.a	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00390000005104.j.b	ENSGT00950000183001.a.a	ENSGT00940000156414	ENSGT00390000004719	ENSGT00390000006865.j.b	ENSGT00940000154277.a.b.b.m.a.b
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00940000166688.a	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000163005.b	ENSGT00390000017384.fb.b #34	ENSGT00940000163005.a	ENSGT00390000017384.fb.a #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00390000005104.j.b	ENSGT00950000183001.a.a
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00940000166688.a	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000163005.b	ENSGT00390000017384.fb.b #34	ENSGT00940000163005.a	ENSGT00390000017384.fb.a #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00390000005104.j.b	ENSGT00950000183001.a.a
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000166688.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00390000017384.gb #34	ENSGT00390000017384.fb.a #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00390000005104.j.b	ENSGT00950000183001.a.a	ENSGT00940000156414	ENSGT00390000004719
Beluga whale	MODERN SPECIES	65	TIAL1 (ENSDLEG00000008473) #7	BAG3 (ENSDLEG00000008440) #8	ENSDLEG00000008409	INPP5F (ENSDLEG00000008316) #9	ENSDLEG00000008284	MCMBP (ENSDLEG00000008221) #10	SEC23IP (ENSDLEG00000008126) #11	PLPP4 (ENSDLEG00000008083) #14	WDR11 (ENSDLEG00000008040) #15	FGFR2 (ENSDLEG00000008001) #16	ATE1 (ENSDLEG00000007967) #17	NSMCE4A (ENSDLEG00000007929) #19	ENSDLEG00000019858 #20	ENSDLEG00000019841 #20	BTBD16 (ENSDLEG00000019832) #21	PLEKHA1 (ENSDLEG00000019819) #22	HTRA1 (ENSDLEG00000019813) #23	CUNH10orf120 (ENSDLEG00000019804) #28	ENSDLEG00000019800 #34	ENSDLEG00000019795 #34	PSTK (ENSDLEG00000019793) #35	IKZF5 (ENSDLEG00000019789) #36	ACADSB (ENSDLEG00000019783) #37	HMX3 (ENSDLEG00000019778)	HMX2 (ENSDLEG00000019773)	BUB3 (ENSDLEG00000019765)	ENSDLEG00000019762	GPR26 (ENSDLEG00000019758)	CPXM2 (ENSDLEG00000019749)	CHST15 (ENSDLEG00000019744)	ENSDLEG00000019741
Narwhal	MODERN SPECIES	311	RGS10 (ENSMMNG00015020257)	TIAL1 (ENSMMNG00015020292) #7	BAG3 (ENSMMNG00015020314) #8	INPP5F (ENSMMNG00015020349) #9	ENSMMNG00015020417	MCMBP (ENSMMNG00015020433) #10	ENSMMNG00015020452	SEC23IP (ENSMMNG00015020467) #11	PLPP4 (ENSMMNG00015020521) #14	WDR11 (ENSMMNG00015020551) #15	FGFR2 (ENSMMNG00015020685) #16	ATE1 (ENSMMNG00015020901) #17	NSMCE4A (ENSMMNG00015020951) #19	ENSMMNG00015021035 #20	BTBD16 (ENSMMNG00015021175) #21	PLEKHA1 (ENSMMNG00015021236) #22	HTRA1 (ENSMMNG00015021277) #23	ENSMMNG00015021290 #27	C10orf120 (ENSMMNG00015021309) #28	ENSMMNG00015021326	ENSMMNG00015021338	PSTK (ENSMMNG00015021353) #35	IKZF5 (ENSMMNG00015021364) #36	ACADSB (ENSMMNG00015021378) #37	HMX3 (ENSMMNG00015021392)	HMX2 (ENSMMNG00015021402)	BUB3 (ENSMMNG00015021424)	ENSMMNG00015021458	GPR26 (ENSMMNG00015021467)	CPXM2 (ENSMMNG00015021491)	CHST15 (ENSMMNG00015021516)
Vaquita	MODERN SPECIES	7	RGS10 (ENSPSNG00000022064)	TIAL1 (ENSPSNG00000022095) #7	BAG3 (ENSPSNG00000022114) #8	INPP5F (ENSPSNG00000022147) #9	ENSPSNG00000022181	MCMBP (ENSPSNG00000022194) #10	SEC23IP (ENSPSNG00000022208) #11	PLPP4 (ENSPSNG00000022236) #14	WDR11 (ENSPSNG00000022247) #15	FGFR2 (ENSPSNG00000022313) #16	ATE1 (ENSPSNG00000022367) #17	NSMCE4A (ENSPSNG00000022375) #19	ENSPSNG00000022404 #20	ENSPSNG00000022440 #20	BTBD16 (ENSPSNG00000022446) #21	PLEKHA1 (ENSPSNG00000022463) #22	HTRA1 (ENSPSNG00000022472) #23	ENSPSNG00000022481 #27	ENSPSNG00000022486 #27	C10orf120 (ENSPSNG00000022490) #28	ENSPSNG00000022493	ENSPSNG00000022495 #34	ENSPSNG00000022497	ENSPSNG00000022499 #34	PSTK (ENSPSNG00000022505) #35	IKZF5 (ENSPSNG00000022509) #36	ACADSB (ENSPSNG00000022512) #37	HMX3 (ENSPSNG00000022517)	BUB3 (ENSPSNG00000022526)	ENSPSNG00000004804	GPR26 (ENSPSNG00000004875)
Dolphin	MODERN SPECIES	583															BTBD16 (ENSTTRG00000005150) #21	PLEKHA1 (ENSTTRG00000005204) #22	HTRA1 (ENSTTRG00000005241) #23	ENSTTRG00000005254 #27
Sperm whale	MODERN SPECIES	12	CHST15 (ENSPCTG00005004768)	CPXM2 (ENSPCTG00005004720)	GPR26 (ENSPCTG00005004687)	ENSPCTG00005004662	BUB3 (ENSPCTG00005004599)	HMX2 (ENSPCTG00005004556)	HMX3 (ENSPCTG00005004538)	ACADSB (ENSPCTG00005004501) #37	IKZF5 (ENSPCTG00005004486) #36	PSTK (ENSPCTG00005004477) #35	ENSPCTG00005004457 #34	ENSPCTG00005022370 #34	C10orf120 (ENSPCTG00005022369) #28	ENSPCTG00005022368 #27	ENSPCTG00005022367 #23	PLEKHA1 (ENSPCTG00005022364) #22	ENSPCTG00005022356 #19	ATE1 (ENSPCTG00005022336) #17	FGFR2 (ENSPCTG00005022152) #16	WDR11 (ENSPCTG00005022064) #15	ENSPCTG00005022049	PLPP4 (ENSPCTG00005022038) #14	ENSPCTG00005022034	ENSPCTG00005022029	SEC23IP (ENSPCTG00005022014) #11	MCMBP (ENSPCTG00005022006) #10	ENSPCTG00005022003	INPP5F (ENSPCTG00005021967) #9	ENSPCTG00005021949	ENSPCTG00005021946	NANOS1 (ENSPCTG00005021940)
Blue whale	MODERN SPECIES	7	RGS10 (ENSBMSG00010013065)	TIAL1 (ENSBMSG00010013032) #7	BAG3 (ENSBMSG00010013012) #8	ENSBMSG00010012993	INPP5F (ENSBMSG00010012966) #9	ENSBMSG00010012916	MCMBP (ENSBMSG00010012893) #10	SEC23IP (ENSBMSG00010012870) #11	PLPP4 (ENSBMSG00010012851) #14	WDR11 (ENSBMSG00010012814) #15	FGFR2 (ENSBMSG00010012623) #16	ATE1 (ENSBMSG00010017265) #17	NSMCE4A (ENSBMSG00010017199) #19	ENSBMSG00010015526 #20	BTBD16 (ENSBMSG00010015231) #21	PLEKHA1 (ENSBMSG00010015154) #22	HTRA1 (ENSBMSG00010015062) #23	C10orf120 (ENSBMSG00010015033) #28	ENSBMSG00010014864 #27	ENSBMSG00010014827	ENSBMSG00010014809	ENSBMSG00010014794 #34	ENSBMSG00010014768	ENSBMSG00010014749 #34	PSTK (ENSBMSG00010014723) #35	IKZF5 (ENSBMSG00010014703) #36	ENSBMSG00010014664 #37	HMX3 (ENSBMSG00010014645)	HMX2 (ENSBMSG00010014617)	BUB3 (ENSBMSG00010014520)	ENSBMSG00010014482
Pecora	ANCESTRAL SPECIES	12	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00940000166688	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00940000169826	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112.c	ENSGT00390000012112.d	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000163005.b	ENSGT00940000163005.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a
Percora_a	ANCESTRAL SPECIES	14	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00940000169826	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112.c	ENSGT00390000012112.d.b	ENSGT00390000012112.d.a	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000162108.sb.b #31	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a
Bovidae	ANCESTRAL SPECIES	24	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00940000169826	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112.c	ENSGT00390000012112.d.b	ENSGT00390000012112.d.a	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000162108.sb.b #31	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a
Bovinae	ANCESTRAL SPECIES	22	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00960000193053	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00940000169826	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112.c	ENSGT00390000012112.d.b	ENSGT00390000012112.d.a	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000162108.sb.b #31	ENSGT00940000163005.b	ENSGT00390000017384.v #34	ENSGT00940000163005.a	ENSGT00390000017384.u #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36
Bos	ANCESTRAL SPECIES	23	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.b.a.b.b	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00940000169826	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112.c	ENSGT00390000012112.d.b	ENSGT00390000012112.d.a	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000162108.sb.b #31	ENSGT00940000163005.b	ENSGT00390000017384.v #34	ENSGT00940000163005.a	ENSGT00390000017384.u #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36
Bos_a	ANCESTRAL SPECIES	17	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.b.a.b.b	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112.c	ENSGT00390000012112.d.b	ENSGT00390000012112.d.a	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000163005.b	ENSGT00390000017384.v #34	ENSGT00940000163005.a	ENSGT00390000017384.u #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000153295.a.e.a.b	ENSGT00940000156525 #37
Wild yak	MODERN SPECIES	302												ATE1 (ENSBMUG00000015088) #17	NSMCE4A (ENSBMUG00000014952) #19	TACC2 (ENSBMUG00000014772) #20	BTBD16 (ENSBMUG00000014447) #21	PLEKHA1 (ENSBMUG00000014404) #22	HTRA1 (ENSBMUG00000014370) #23	ENSBMUG00000014336 #27	ENSBMUG00000014303 #27
Domestic yak	MODERN SPECIES	17	GRK5 (ENSBGRG00000020547)	RGS10 (ENSBGRG00000021293)	TIAL1 (ENSBGRG00000021417) #7	BAG3 (ENSBGRG00000021665) #8	INPP5F (ENSBGRG00000021737) #9	MCMBP (ENSBGRG00000022255) #10	ENSBGRG00000022579	SEC23IP (ENSBGRG00000022602) #11	ENSBGRG00000022938 #14	WDR11 (ENSBGRG00000023025) #15	FGFR2 (ENSBGRG00000023230) #16	ATE1 (ENSBGRG00000023442) #17	NSMCE4A (ENSBGRG00000023734) #19	ENSBGRG00000024000 #20	BTBD16 (ENSBGRG00000024940) #21	PLEKHA1 (ENSBGRG00000024986) #22	HTRA1 (ENSBGRG00000025045) #23	ENSBGRG00000025099 #27	ENSBGRG00000025138	ENSBGRG00000025155	ENSBGRG00000025185	C10orf120 (ENSBGRG00000025213) #28	ENSBGRG00000025242 #30	ENSBGRG00000025332	ENSBGRG00000025341 #34	ENSBGRG00000025366	ENSBGRG00000025376 #34	PSTK (ENSBGRG00000025390) #35	IKZF5 (ENSBGRG00000025418) #36	ACADSB (ENSBGRG00000025451) #37	ENSBGRG00000025478
Bos_b	ANCESTRAL SPECIES	23	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.b.a.b.b	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00940000169826	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112.c	ENSGT00390000012112.d.b	ENSGT00390000012112.d.a	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000162108.sb.b #31	ENSGT00940000163005.b	ENSGT00390000017384.v #34	ENSGT00940000163005.a	ENSGT00390000017384.u #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36
Hybrid Bos Indicus	MODERN SPECIES	18	PRDX3 (ENSBIXG00005020003)	GRK5 (ENSBIXG00005020062)	RGS10 (ENSBIXG00005020105)	TIAL1 (ENSBIXG00005003333) #7	BAG3 (ENSBIXG00005020191) #8	INPP5F (ENSBIXG00005020287) #9	MCMBP (ENSBIXG00005020337) #10	SEC23IP (ENSBIXG00005003449) #11	PLPP4 (ENSBIXG00005020504) #14	WDR11 (ENSBIXG00005003481) #15	FGFR2 (ENSBIXG00005003546) #16	ATE1 (ENSBIXG00005021194) #17	NSMCE4A (ENSBIXG00005021235) #19	TACC2 (ENSBIXG00005003615) #20	BTBD16 (ENSBIXG00005003629) #21	PLEKHA1 (ENSBIXG00005021579) #22	HTRA1 (ENSBIXG00005021640) #23	ENSBIXG00005021652 #27	ENSBIXG00005021747 #27	ENSBIXG00005021776 #27	ENSBIXG00005021850	ENSBIXG00005021867	ENSBIXG00005021940	C10orf120 (ENSBIXG00005021964) #28	ENSBIXG00005007366 #30	ENSBIXG00005003736	ENSBIXG00005022065 #34	ENSBIXG00005022073	ENSBIXG00005022094 #34	PSTK (ENSBIXG00005007367) #35	IKZF5 (ENSBIXG00005022167) #36
Cow	MODERN SPECIES	18	RGS10 (ENSBTAG00000002647)	TIAL1 (ENSBTAG00000004080) #7	BAG3 (ENSBTAG00000013641) #8	INPP5F (ENSBTAG00000021801) #9	MCMBP (ENSBTAG00000009877) #10	ENSBTAG00000048455	SEC23IP (ENSBTAG00000007441) #11	PLPP4 (ENSBTAG00000032106) #14	ENSBTAG00000049781	WDR11 (ENSBTAG00000021540) #15	FGFR2 (ENSBTAG00000014064) #16	ATE1 (ENSBTAG00000003178) #17	NSMCE4A (ENSBTAG00000019166) #19	TACC2 (ENSBTAG00000010786) #20	BTBD16 (ENSBTAG00000008819) #21	PLEKHA1 (ENSBTAG00000004636) #22	HTRA1 (ENSBTAG00000008389) #23	ENSBTAG00000050618 #27	ENSBTAG00000052092 #27	ENSBTAG00000053545 #27	ENSBTAG00000038684	SPADH2 (ENSBTAG00000008029)	SPADH1 (ENSBTAG00000010796)	C26H10orf120 (ENSBTAG00000010797) #28	ENSBTAG00000039755 #30	ENSBTAG00000055162 ##31	ENSBTAG00000051599 #31	ENSBTAG00000023846 #34	ENSBTAG00000023845 #34	PSTK (ENSBTAG00000014028) #35	IKZF5 (ENSBTAG00000023847) #36
American bison	MODERN SPECIES	3316	RGS10 (ENSBBBG00000010192)	TIAL1 (ENSBBBG00000010202) #7	BAG3 (ENSBBBG00000010215) #8	INPP5F (ENSBBBG00000000062) #9	MCMBP (ENSBBBG00000010269) #10	ENSBBBG00000010282	SEC23IP (ENSBBBG00000010295) #11	PLPP4 (ENSBBBG00000010305) #14	WDR11 (ENSBBBG00000010323) #15	FGFR2 (ENSBBBG00000010374) #16	ATE1 (ENSBBBG00000010422) #17	ENSBBBG00000010432 #18	NSMCE4A (ENSBBBG00000010442) #19	ENSBBBG00000010608 #20	BTBD16 (ENSBBBG00000010631) #21	PLEKHA1 (ENSBBBG00000010672) #22	ENSBBBG00000009041 #23	ENSBBBG00000010694	ENSBBBG00000010708	ENSBBBG00000008726	C10orf120 (ENSBBBG00000001875) #28	ENSBBBG00000010993 #30	ENSBBBG00000011033	ENSBBBG00000011038	C10orf88 (ENSBBBG00000011048) #34	PSTK (ENSBBBG00000001987) #35	IKZF5 (ENSBBBG00000011060) #36	ACADSB (ENSBBBG00000011078) #37	HMX3 (ENSBBBG00000011087)	HMX2 (ENSBBBG00000001996)	BUB3 (ENSBBBG00000002000)
Caprinae	ANCESTRAL SPECIES	19	ENSGT00940000153430.a.b	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068.o #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112.c	ENSGT00390000012112.d.b	ENSGT00390000012112.d.a	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00390000017384.x #34	ENSGT00940000163005.a	ENSGT00390000017384.w #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286
Goat	MODERN SPECIES	18	GRK5 (ENSCHIG00000003897)	RGS10 (ENSCHIG00000011045)	TIAL1 (ENSCHIG00000020810) #7	BAG3 (ENSCHIG00000019195) #8	INPP5F (ENSCHIG00000013653) #9	MCMBP (ENSCHIG00000016174) #10	SEC23IP (ENSCHIG00000014446) #11	ENSCHIG00000016797	PLPP4 (ENSCHIG00000013810) #14	ENSCHIG00000003717 #15	FGFR2 (ENSCHIG00000017963) #16	ATE1 (ENSCHIG00000011980) #17	NSMCE4A (ENSCHIG00000015022) #19	TACC2 (ENSCHIG00000013177) #20	BTBD16 (ENSCHIG00000021282) #21	PLEKHA1 (ENSCHIG00000005289) #22	HTRA1 (ENSCHIG00000015305) #23	ENSCHIG00000011076 #27	ENSCHIG00000020915	ENSCHIG00000014539	ENSCHIG00000000456	C10orf120 (ENSCHIG00000016466) #28	ENSCHIG00000010921 #30	ENSCHIG00000023064 #34	ENSCHIG00000021927 #34	PSTK (ENSCHIG00000018657) #35	IKZF5 (ENSCHIG00000025772) #36	ACADSB (ENSCHIG00000024606) #37	HMX3 (ENSCHIG00000010956)	HMX2 (ENSCHIG00000026470)	BUB3 (ENSCHIG00000021092)
Rambouillet Sheep	MODERN SPECIES	14	TIAL1 (ENSOARG00020014734) #7	BAG3 (ENSOARG00020014869) #8	INPP5F (ENSOARG00020014985) #9	MCMBP (ENSOARG00020017074) #10	SEC23IP (ENSOARG00020017426) #11	ENSOARG00020018045	ENSOARG00020018072	PLPP4 (ENSOARG00020018154) #14	WDR11 (ENSOARG00020018347) #15	ENSOARG00020018691	FGFR2 (ENSOARG00020018761) #16	ENSOARG00020019110	ATE1 (ENSOARG00020019169) #17	NSMCE4A (ENSOARG00020019481) #19	BTBD16 (ENSOARG00020021862) #21	PLEKHA1 (ENSOARG00020021950) #22	HTRA1 (ENSOARG00020022118) #23	ENSOARG00020022216 #27	ENSOARG00020022252 ##27	ENSOARG00020022296	ENSOARG00020022322	ENSOARG00020022345	C10orf120 (ENSOARG00020022395) #28	ENSOARG00020022445 #30	ENSOARG00020022472 ##31	ENSOARG00020022490	ENSOARG00020022507	ENSOARG00020022531 #34	ENSOARG00020022621	ENSOARG00020022651 #34	PSTK (ENSOARG00020022690) #35
Siberian musk deer	MODERN SPECIES	1161	RGS10 (ENSMMSG00000017368)	ENSMMSG00000017248 #7	BAG3 (ENSMMSG00000017210) #8	INPP5F (ENSMMSG00000016998) #9	MCMBP (ENSMMSG00000016915) #10	SEC23IP (ENSMMSG00000016779) #11	ENSMMSG00000016738	ENSMMSG00000016717	PLPP4 (ENSMMSG00000016645) #14	WDR11 (ENSMMSG00000016506) #15	FGFR2 (ENSMMSG00000016023) #16	ATE1 (ENSMMSG00000015713) #17	NSMCE4A (ENSMMSG00000015672) #19	TACC2 (ENSMMSG00000013885) #20	BTBD16 (ENSMMSG00000013754) #21	PLEKHA1 (ENSMMSG00000013631) #22	HTRA1 (ENSMMSG00000013570) #23	ENSMMSG00000013536	ENSMMSG00000013503	ENSMMSG00000013463	C10orf120 (ENSMMSG00000013433) #28	ENSMMSG00000013363 #30	ENSMMSG00000013335 #31	ENSMMSG00000013323 #34	ENSMMSG00000013300	ENSMMSG00000013281 #34	PSTK (ENSMMSG00000013263) #35	IKZF5 (ENSMMSG00000013250) #36	ACADSB (ENSMMSG00000013226) #37	HMX3 (ENSMMSG00000013208)	HMX2 (ENSMMSG00000013191)
Yarkand deer	MODERN SPECIES	6	TIAL1 (ENSCHYG00000007795) #7	BAG3 (ENSCHYG00000007937) #8	INPP5F (ENSCHYG00000008007) #9	ENSCHYG00000008228	MCMBP (ENSCHYG00000008251) #10	SEC23IP (ENSCHYG00000008365) #11	PLPP4 (ENSCHYG00000008482) #14	ENSCHYG00000008531	WDR11 (ENSCHYG00000008551) #15	FGFR2 (ENSCHYG00000008730) #16	ATE1 (ENSCHYG00000010156) #17	ENSCHYG00000010624 #18	NSMCE4A (ENSCHYG00000010654) #19	TACC2 (ENSCHYG00000010835) #20	BTBD16 (ENSCHYG00000011865) #21	PLEKHA1 (ENSCHYG00000012229) #22	HTRA1 (ENSCHYG00000012466) #23	ENSCHYG00000012574 #27	ENSCHYG00000012694 #30	C10orf120 (ENSCHYG00000012768) #28	ENSCHYG00000012814 ##27	ENSCHYG00000012970	ENSCHYG00000013013 #34	ENSCHYG00000013157 #34	ENSCHYG00000013211	IKZF5 (ENSCHYG00000013253) #36	ACADSB (ENSCHYG00000013318) #37	HMX3 (ENSCHYG00000013451)	HMX2 (ENSCHYG00000013483)	BUB3 (ENSCHYG00000013530)	GPR26 (ENSCHYG00000013748)
Camelidae	ANCESTRAL SPECIES	4	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000166688	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112.c	ENSGT00390000012112.d	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000163005.b	ENSGT00390000017384 #34	ENSGT00940000163005.a
Arabian camel	MODERN SPECIES	2	TIAL1 (ENSCDRG00005016058) #7	BAG3 (ENSCDRG00005016010) #8	ENSCDRG00005015966	INPP5F (ENSCDRG00005015415) #9	MCMBP (ENSCDRG00005015289) #10	SEC23IP (ENSCDRG00005015175) #11	PLPP4 (ENSCDRG00005015079) #14	WDR11 (ENSCDRG00005014918) #15	ENSCDRG00005014853	FGFR2 (ENSCDRG00005014046) #16	ATE1 (ENSCDRG00005013374) #17	ENSCDRG00005013283 #18	NSMCE4A (ENSCDRG00005013236) #19	TACC2 (ENSCDRG00005009143) #20	BTBD16 (ENSCDRG00005008822) #21	PLEKHA1 (ENSCDRG00005008676) #22	ENSCDRG00005008651	HTRA1 (ENSCDRG00005008605) #23	ENSCDRG00005008578 #27	ENSCDRG00005008546	ENSCDRG00005008442	ENSCDRG00005008386	ENSCDRG00005008358	C10orf120 (ENSCDRG00005008312) #28	ENSCDRG00005007985	ENSCDRG00005007808 #30	ENSCDRG00005007759	ENSCDRG00005007717	ENSCDRG00005007572 #34	ENSCDRG00005007518 #34	PSTK (ENSCDRG00005007484) #35
Alpaca	MODERN SPECIES	688															BTBD16 (ENSVPAG00000007074) #21	PLEKHA1 (ENSVPAG00000007075) #22
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155157 #22
Hedgehog	MODERN SPECIES	1061																PLEKHA1 (ENSEEUG00000009390) #22
Common shrew	MODERN SPECIES	644																PLEKHA1 (ENSSARG00000010495) #22
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000162108.sb.b #31	ENSGT00940000165716	ENSGT00940000154525.b.a #32	ENSGT00940000163005	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37
Primates	ANCESTRAL SPECIES	16	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000162108.sb.b #31	ENSGT00940000154525.b.a #32	ENSGT00940000163005	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000162108.sb.b #31	ENSGT00940000154525.b.a #32	ENSGT00940000163005	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000162108.sb.b #31	ENSGT00940000154525.b.a #32	ENSGT00390000017384.j #34	ENSGT00940000163005	ENSGT00390000017384.i #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37
Mouse lemur	MODERN SPECIES	6	GRK5 (ENSMICG00000007635)	ENSMICG00000005524	TIAL1 (ENSMICG00000037857) #7	BAG3 (ENSMICG00000027251) #8	INPP5F (ENSMICG00000007525) #9	MCMBP (ENSMICG00000007540) #10	SEC23IP (ENSMICG00000007551) #11	ENSMICG00000037953	PLPP4 (ENSMICG00000008887) #14	WDR11 (ENSMICG00000008892) #15	FGFR2 (ENSMICG00000000424) #16	ATE1 (ENSMICG00000009823) #17	NSMCE4A (ENSMICG00000042455) #19	TACC2 (ENSMICG00000009830) #20	BTBD16 (ENSMICG00000009849) #21	PLEKHA1 (ENSMICG00000037532) #22	HTRA1 (ENSMICG00000009867) #23	ENSMICG00000037650	ENSMICG00000037150 #27	C10orf120 (ENSMICG00000008567) #28	CUZD1 (ENSMICG00000044009) #32	ENSMICG00000035025 #34	ENSMICG00000008610	ENSMICG00000015190 #34	PSTK (ENSMICG00000005140) #35	IKZF5 (ENSMICG00000043450) #36	ACADSB (ENSMICG00000000462) #37	HMX3 (ENSMICG00000000467)	HMX2 (ENSMICG00000000468)	BUB3 (ENSMICG00000000469)	GPR26 (ENSMICG00000045590)
Lemuriformes_a	ANCESTRAL SPECIES	42	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000162108.sb.a ##31	ENSGT00940000162108.sb.b #31	ENSGT00940000154525.b.a #32	ENSGT00940000163005	ENSGT00390000017384.i #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286
Coquerels sifaka	MODERN SPECIES	258	SFXN4 (ENSPCOG00000027384)	PRDX3 (ENSPCOG00000024919)	GRK5 (ENSPCOG00000022845)	RGS10 (ENSPCOG00000020094)	TIAL1 (ENSPCOG00000018990) #7	BAG3 (ENSPCOG00000027192) #8	INPP5F (ENSPCOG00000015152) #9	MCMBP (ENSPCOG00000020444) #10	PLPP4 (ENSPCOG00000025706) #14	WDR11 (ENSPCOG00000019354) #15	FGFR2 (ENSPCOG00000027873) #16	ATE1 (ENSPCOG00000026224) #17	NSMCE4A (ENSPCOG00000011420) #19	ENSPCOG00000026897 #20	BTBD16 (ENSPCOG00000020204) #21	PLEKHA1 (ENSPCOG00000027097) #22	HTRA1 (ENSPCOG00000021590) #23	ENSPCOG00000015298 #27	C10orf120 (ENSPCOG00000020092) #28	CUZD1 (ENSPCOG00000026175) #32	ENSPCOG00000008575	ENSPCOG00000018262 #34	PSTK (ENSPCOG00000015070) #35	IKZF5 (ENSPCOG00000024918) #36	ACADSB (ENSPCOG00000017961) #37	HMX3 (ENSPCOG00000004827)	HMX2 (ENSPCOG00000021307)	BUB3 (ENSPCOG00000024614)	GPR26 (ENSPCOG00000019047)	CPXM2 (ENSPCOG00000022596)	CHST15 (ENSPCOG00000028486)
Greater bamboo lemur	MODERN SPECIES	193	ENSPSMG00000011218	TIAL1 (ENSPSMG00000011113) #7	BAG3 (ENSPSMG00000010989) #8	INPP5F (ENSPSMG00000010892) #9	MCMBP (ENSPSMG00000010773) #10	SEC23IP (ENSPSMG00000010732) #11	PLPP4 (ENSPSMG00000010705) #14	WDR11 (ENSPSMG00000010687) #15	FGFR2 (ENSPSMG00000009785) #16	ATE1 (ENSPSMG00000009100) #17	ENSPSMG00000008956 #18	NSMCE4A (ENSPSMG00000008948) #19	ENSPSMG00000008933 #20	ENSPSMG00000008723 #20	BTBD16 (ENSPSMG00000008410) #21	PLEKHA1 (ENSPSMG00000008359) #22	HTRA1 (ENSPSMG00000008292) #23	ENSPSMG00000008270 #27	ENSPSMG00000008256 #27	SPADH (ENSPSMG00000008250)	C10orf120 (ENSPSMG00000008229) #28	ENSPSMG00000008209	ENSPSMG00000008149 #30	ENSPSMG00000008017 ##31	ENSPSMG00000008008 #31	CUZD1 (ENSPSMG00000008002) #32
Bushbaby	DUPLICATION
Bushbaby	MODERN SPECIES	136	TIAL1 (ENSOGAG00000011417) #7	ENSOGAG00000011419	BAG3 (ENSOGAG00000011421) #8	INPP5F (ENSOGAG00000009706) #9	MCMBP (ENSOGAG00000009714) #10	SEC23IP (ENSOGAG00000004948) #11	PLPP4 (ENSOGAG00000016998) #14	WDR11 (ENSOGAG00000012465) #15	FGFR2 (ENSOGAG00000012206) #16	ATE1 (ENSOGAG00000010023) #17	ENSOGAG00000031150 #18	NSMCE4A (ENSOGAG00000010026) #19	TACC2 (ENSOGAG00000010030) #20	BTBD16 (ENSOGAG00000010035) #21	ENSOGAG00000026108	ENSOGAG00000010036 #22	HTRA1 (ENSOGAG00000010043) #23	ENSOGAG00000033009 #27
Bushbaby	MODERN SPECIES	70																ENSOGAG00000026962 #22
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00940000153430.a.b	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	6550													NSMCE4A (ENSTSYG00000009505) #19	ENSTSYG00000028389 #20	BTBD16 (ENSTSYG00000013446) #21	PLEKHA1 (ENSTSYG00000032733) #22
Tarsier	MODERN SPECIES	7253												RAD51D (ENSTSYG00000002439)	FNDC8 (ENSTSYG00000033775)	NLE1 (ENSTSYG00000005707)	UNC45B (ENSTSYG00000005718)	ENSTSYG00000012984 #22	ENSTSYG00000012957	ENSTSYG00000027201	SLFN13 (ENSTSYG00000035997)	ENSTSYG00000032197	SLFN14 (ENSTSYG00000026907)	PEX12 (ENSTSYG00000013016)	AP2B1 (ENSTSYG00000013030)	RASL10B (ENSTSYG00000026278)	ENSTSYG00000036881	ANXA9 (ENSTSYG00000012630)
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000154259.k.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00440000033468.c.b	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00390000017384.h #34	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000154259.k.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00440000033468.c.b	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00390000017384.h #34	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00910000147084	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000154259.k.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00390000017384.h #34	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392
Hominidae	ANCESTRAL SPECIES	13	ENSGT00910000147084	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000154259.k.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00390000017384.h #34	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00910000147084	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000154259.k.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00390000017384.h #34	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392
Gorilla	MODERN SPECIES	1	ENSGGOG00000024741	BAG3 (ENSGGOG00000011503) #8	ENSGGOG00000022627	INPP5F (ENSGGOG00000005991) #9	MCMBP (ENSGGOG00000006006) #10	SEC23IP (ENSGGOG00000003921) #11	ENSGGOG00000025941	ENSGGOG00000011322 #14	WDR11 (ENSGGOG00000003069) #15	ENSGGOG00000024510	FGFR2 (ENSGGOG00000008336) #16	ATE1 (ENSGGOG00000008233) #17	ENSGGOG00000010663 #19	TACC2 (ENSGGOG00000004946) #20	BTBD16 (ENSGGOG00000004960) #21	PLEKHA1 (ENSGGOG00000005120) #22	ARMS2 (ENSGGOG00000037501)	HTRA1 (ENSGGOG00000004853) #23	C10orf120 (ENSGGOG00000026034) #28	CUZD1 (ENSGGOG00000007184) #32	FAM24B (ENSGGOG00000007190)	ENSGGOG00000006191 #34	FAM24A (ENSGGOG00000007194)	C10orf88 (ENSGGOG00000007191) #34	PSTK (ENSGGOG00000003866) #35	IKZF5 (ENSGGOG00000003823) #36	ACADSB (ENSGGOG00000003827) #37	HMX3 (ENSGGOG00000023271)	HMX2 (ENSGGOG00000039592)	BUB3 (ENSGGOG00000023971)	ENSGGOG00000037837
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00910000147084	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000154259.k.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00390000017384.h #34	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392
Pan	ANCESTRAL SPECIES	16	ENSGT00910000147084	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000154259.k.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00390000017384.h #34	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a.g
Bonobo	MODERN SPECIES	1	TIAL1 (ENSPPAG00000043098) #7	ENSPPAG00000036209	BAG3 (ENSPPAG00000042723) #8	ENSPPAG00000030508	INPP5F (ENSPPAG00000028448) #9	MCMBP (ENSPPAG00000041372) #10	SEC23IP (ENSPPAG00000021343) #11	ENSPPAG00000035383	PLPP4 (ENSPPAG00000040406) #14	WDR11 (ENSPPAG00000034753) #15	FGFR2 (ENSPPAG00000034123) #16	ATE1 (ENSPPAG00000039734) #17	ENSPPAG00000035638 #19	TACC2 (ENSPPAG00000038587) #20	BTBD16 (ENSPPAG00000042790) #21	PLEKHA1 (ENSPPAG00000003709) #22	ARMS2 (ENSPPAG00000041770)	HTRA1 (ENSPPAG00000000055) #23	DMBT1 (ENSPPAG00000029246) #27	C10orf120 (ENSPPAG00000027128) #28	CUZD1 (ENSPPAG00000038806) #32	FAM24B (ENSPPAG00000030186)	ENSPPAG00000026413 #34	FAM24A (ENSPPAG00000029503)	C10orf88 (ENSPPAG00000040286) #34	PSTK (ENSPPAG00000030978) #35	IKZF5 (ENSPPAG00000032125) #36	ACADSB (ENSPPAG00000036912) #37	HMX3 (ENSPPAG00000043159)	ENSPPAG00000043570	BUB3 (ENSPPAG00000030058)
Chimpanzee	MODERN SPECIES	1	ENSPTRG00000046181	ENSPTRG00000040193	BAG3 (ENSPTRG00000002998) #8	ENSPTRG00000051748	INPP5F (ENSPTRG00000022873) #9	MCMBP (ENSPTRG00000003000) #10	SEC23IP (ENSPTRG00000003001) #11	ENSPTRG00000048120	PLPP4 (ENSPTRG00000029684) #14	WDR11 (ENSPTRG00000003004) #15	FGFR2 (ENSPTRG00000003003) #16	ATE1 (ENSPTRG00000003005) #17	NSMCE4A (ENSPTRG00000003006) #19	TACC2 (ENSPTRG00000003008) #20	BTBD16 (ENSPTRG00000003009) #21	PLEKHA1 (ENSPTRG00000003010) #22	ARMS2 (ENSPTRG00000051999)	HTRA1 (ENSPTRG00000003011) #23	DMBT1 (ENSPTRG00000022758) #27	C10H10orf120 (ENSPTRG00000003012) #28	CUZD1 (ENSPTRG00000003015) #32	FAM24B (ENSPTRG00000034300)	ENSPTRG00000048474 #34	FAM24A (ENSPTRG00000029673)	C10H10orf88 (ENSPTRG00000003017) #34	PSTK (ENSPTRG00000003018) #35	IKZF5 (ENSPTRG00000003019) #36	ACADSB (ENSPTRG00000003020) #37	HMX3 (ENSPTRG00000046925)	HMX2 (ENSPTRG00000047334)	BUB3 (ENSPTRG00000044868)
Human	MODERN SPECIES	1	PRDX3 (ENSG00000165672)	GRK5 (ENSG00000198873)	RGS10 (ENSG00000148908)	TIAL1 (ENSG00000151923) #7	BAG3 (ENSG00000151929) #8	INPP5F (ENSG00000198825) #9	MCMBP (ENSG00000197771) #10	SEC23IP (ENSG00000107651) #11	PLPP4 (ENSG00000203805) #14	WDR11 (ENSG00000120008) #15	FGFR2 (ENSG00000066468) #16	ATE1 (ENSG00000107669) #17	NSMCE4A (ENSG00000107672) #19	TACC2 (ENSG00000138162) #20	BTBD16 (ENSG00000138152) #21	PLEKHA1 (ENSG00000107679) #22	ARMS2 (ENSG00000254636)	HTRA1 (ENSG00000166033) #23	DMBT1 (ENSG00000187908) #27	SPADH (ENSG00000286135)	C10orf120 (ENSG00000183559) #28	CUZD1 (ENSG00000138161) #32	FAM24B (ENSG00000213185)	FAM24A (ENSG00000203795)	C10orf88 (ENSG00000119965) #34	PSTK (ENSG00000179988) #35	IKZF5 (ENSG00000095574) #36	ACADSB (ENSG00000196177) #37	HMX3 (ENSG00000188620)	HMX2 (ENSG00000188816)	BUB3 (ENSG00000154473)
Orangutan	MODERN SPECIES	1	ENSPPYG00000037360	TIAL1 (ENSPPYG00000002703) #7	BAG3 (ENSPPYG00000002705) #8	ENSPPYG00000031900	INPP5F (ENSPPYG00000002706) #9	MCMBP (ENSPPYG00000002707) #10	SEC23IP (ENSPPYG00000002708) #11	ENSPPYG00000030022	PLPP4 (ENSPPYG00000002709) #14	WDR11 (ENSPPYG00000029859) #15	FGFR2 (ENSPPYG00000002710) #16	ATE1 (ENSPPYG00000002711) #17	NSMCE4A (ENSPPYG00000002712) #19	TACC2 (ENSPPYG00000002713) #20	BTBD16 (ENSPPYG00000002714) #21	PLEKHA1 (ENSPPYG00000002715) #22	HTRA1 (ENSPPYG00000002716) #23	ENSPPYG00000002717 #27	SPADH (ENSPPYG00000002718)	C10orf120 (ENSPPYG00000002719) #28	CUZD1 (ENSPPYG00000002722) #32	ENSPPYG00000030182	ENSPPYG00000037859 #34	FAM24A (ENSPPYG00000002724)	C10orf88 (ENSPPYG00000002725) #34	PSTK (ENSPPYG00000002726) #35	IKZF5 (ENSPPYG00000038620) #36	ACADSB (ENSPPYG00000002728) #37	HMX3 (ENSPPYG00000002729)	HMX2 (ENSPPYG00000033793)	BUB3 (ENSPPYG00000002731)
Gibbon	MODERN SPECIES	18	GRK5 (ENSNLEG00000016723)	RGS10 (ENSNLEG00000035071)	TIAL1 (ENSNLEG00000016743) #7	BAG3 (ENSNLEG00000016750) #8	ENSNLEG00000029480	INPP5F (ENSNLEG00000016753) #9	MCMBP (ENSNLEG00000016770) #10	SEC23IP (ENSNLEG00000016780) #11	PLPP4 (ENSNLEG00000028427) #14	WDR11 (ENSNLEG00000016815) #15	FGFR2 (ENSNLEG00000016854) #16	ATE1 (ENSNLEG00000016908) #17	NSMCE4A (ENSNLEG00000016919) #19	TACC2 (ENSNLEG00000016926) #20	BTBD16 (ENSNLEG00000016981) #21	PLEKHA1 (ENSNLEG00000016991) #22	ARMS2 (ENSNLEG00000016999)	HTRA1 (ENSNLEG00000017001) #23	ENSNLEG00000017018 #27	C10orf120 (ENSNLEG00000017025) #28	CUZD1 (ENSNLEG00000017027) #32	FAM24B (ENSNLEG00000028659)	ENSNLEG00000017042 #34	FAM24A (ENSNLEG00000017045)	C10orf88 (ENSNLEG00000017047) #34	PSTK (ENSNLEG00000029733) #35	IKZF5 (ENSNLEG00000027055) #36	ACADSB (ENSNLEG00000026715) #37	HMX3 (ENSNLEG00000032860)	HMX2 (ENSNLEG00000033504)	BUB3 (ENSNLEG00000030093)
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00910000147084	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000154259.k.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00910000148049	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286
Rhinopithecus	ANCESTRAL SPECIES	34	ENSGT00940000161426	ENSGT00910000147084	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000154259.k.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.a.a #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00390000017384.h #34	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00910000148049	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a.i.a
Golden snub-nosed monkey	MODERN SPECIES	813														TACC2 (ENSRROG00000041105) #20	BTBD16 (ENSRROG00000039453) #21	PLEKHA1 (ENSRROG00000034004) #22	HTRA1 (ENSRROG00000039096) #23	DMBT1 (ENSRROG00000037950) #27	C10orf120 (ENSRROG00000040542) #28	CUZD1 (ENSRROG00000034208) #32	FAM24B (ENSRROG00000044993)	FAM24A (ENSRROG00000025149)	C10orf88 (ENSRROG00000026348) #34	ENSRROG00000042113	PSTK (ENSRROG00000010210) #35	IKZF5 (ENSRROG00000023471) #36	ACADSB (ENSRROG00000042969) #37	HMX3 (ENSRROG00000039758)	HMX2 (ENSRROG00000038682)	ENSRROG00000043912	GPR26 (ENSRROG00000034092)
Black snub-nosed monkey	MODERN SPECIES	403	ENSRBIG00000031561	TRA2A (ENSRBIG00000036805)	IGF2BP3 (ENSRBIG00000033008)	MALSU1 (ENSRBIG00000043513)	INPP5F (ENSRBIG00000029982) #9	MCMBP (ENSRBIG00000043184) #10	SEC23IP (ENSRBIG00000016638) #11	PLPP4 (ENSRBIG00000028012) #14	WDR11 (ENSRBIG00000030219) #15	FGFR2 (ENSRBIG00000028118) #16	ENSRBIG00000037682	ATE1 (ENSRBIG00000039407) #17	NSMCE4A (ENSRBIG00000032411) #19	TACC2 (ENSRBIG00000029332) #20	BTBD16 (ENSRBIG00000032916) #21	PLEKHA1 (ENSRBIG00000033706) #22	HTRA1 (ENSRBIG00000037080) #23	ENSRBIG00000044070 #27
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000154259.k.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00910000148049	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000154259.k.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00910000148049	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286
Macaca	ANCESTRAL SPECIES	11	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00910000148049	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00940000160482 #7	ENSGT00390000012433.a.a.a.a.b	ENSGT00940000161627.a.a.a.b.b.b.a.a.a.a.c.a	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.b.b.b.a.b.a.b.b.a	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00910000148049	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392
Rhesus	MODERN SPECIES	19	BAG3 (ENSMMUG00000000798) #8	INPP5F (ENSMMUG00000009558) #9	MCMBP (ENSMMUG00000009559) #10	ENSMMUG00000065302	SEC23IP (ENSMMUG00000009561) #11	PLPP4 (ENSMMUG00000008724) #14	ENSMMUG00000064321	ENSMMUG00000064557	WDR11 (ENSMMUG00000001118) #15	FGFR2 (ENSMMUG00000009594) #16	ENSMMUG00000059094	ATE1 (ENSMMUG00000021594) #17	NSMCE4A (ENSMMUG00000012044) #19	TACC2 (ENSMMUG00000013033) #20	BTBD16 (ENSMMUG00000013038) #21	PLEKHA1 (ENSMMUG00000013040) #22	HTRA1 (ENSMMUG00000056637) #23	ENSMMUG00000065343 #27	ENSMMUG00000021138 #27	SPADH (ENSMMUG00000052634)	C9H10orf120 (ENSMMUG00000021140) #28	CUZD1 (ENSMMUG00000010458) #32	FAM24A (ENSMMUG00000057705)	C9H10orf88 (ENSMMUG00000008564) #34	PSTK (ENSMMUG00000017858) #35	IKZF5 (ENSMMUG00000023480) #36	ACADSB (ENSMMUG00000000684) #37	HMX3 (ENSMMUG00000003090)	HMX2 (ENSMMUG00000053104)	BUB3 (ENSMMUG00000003092)	GPR26 (ENSMMUG00000053995)
Crab-eating macaque	MODERN SPECIES	19	BAG3 (ENSMFAG00000035851) #8	INPP5F (ENSMFAG00000042323) #9	MCMBP (ENSMFAG00000000064) #10	SEC23IP (ENSMFAG00000042549) #11	ENSMFAG00000037481 #14	ENSMFAG00000062414	ENSMFAG00000065246	WDR11 (ENSMFAG00000031615) #15	ENSMFAG00000051354	FGFR2 (ENSMFAG00000045752) #16	ENSMFAG00000063455	ATE1 (ENSMFAG00000043722) #17	NSMCE4A (ENSMFAG00000000251) #19	TACC2 (ENSMFAG00000037369) #20	BTBD16 (ENSMFAG00000002237) #21	PLEKHA1 (ENSMFAG00000041484) #22	HTRA1 (ENSMFAG00000044439) #23	ENSMFAG00000062863	DMBT1 (ENSMFAG00000003903) #27	SPADH (ENSMFAG00000049536)	C10orf120 (ENSMFAG00000041530) #28	ENSMFAG00000046495 #30	CUZD1 (ENSMFAG00000033660) #32	FAM24B (ENSMFAG00000061971)	FAM24A (ENSMFAG00000060945)	C10orf88 (ENSMFAG00000062466) #34	ENSMFAG00000061411	ENSMFAG00000064549	PSTK (ENSMFAG00000036565) #35	IKZF5 (ENSMFAG00000046268) #36	ACADSB (ENSMFAG00000034302) #37
Pig-tailed macaque	MODERN SPECIES	92										WDR11 (ENSMNEG00000036981) #15	FGFR2 (ENSMNEG00000040871) #16	ATE1 (ENSMNEG00000039140) #17	NSMCE4A (ENSMNEG00000029721) #19	TACC2 (ENSMNEG00000035162) #20	BTBD16 (ENSMNEG00000043402) #21	PLEKHA1 (ENSMNEG00000042304) #22	ARMS2 (ENSMNEG00000037085)	HTRA1 (ENSMNEG00000039398) #23	ENSMNEG00000035126 #27	C10orf120 (ENSMNEG00000032555) #28	CUZD1 (ENSMNEG00000033847) #32	FAM24B (ENSMNEG00000032458)	FAM24A (ENSMNEG00000039220)	C10orf88 (ENSMNEG00000033455) #34	ENSMNEG00000032659	PSTK (ENSMNEG00000029291) #35	IKZF5 (ENSMNEG00000036978) #36	ACADSB (ENSMNEG00000031260) #37	HMX3 (ENSMNEG00000043084)	HMX2 (ENSMNEG00000028435)	ENSMNEG00000000049
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000173066	ENSGT00940000159204 #8	ENSGT00940000154259.k.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a.i.a	ENSGT00950000183001.a.a
Olive baboon	MODERN SPECIES	2	RGS10 (ENSPANG00000020561)	TIAL1 (ENSPANG00000020518) #7	BAG3 (ENSPANG00000020521) #8	INPP5F (ENSPANG00000020522) #9	MCMBP (ENSPANG00000020524) #10	SEC23IP (ENSPANG00000020516) #11	PLPP4 (ENSPANG00000020515) #14	WDR11 (ENSPANG00000020499) #15	ENSPANG00000038420	ENSPANG00000044749	FGFR2 (ENSPANG00000020505) #16	ATE1 (ENSPANG00000020496) #17	NSMCE4A (ENSPANG00000020473) #19	TACC2 (ENSPANG00000020477) #20	BTBD16 (ENSPANG00000020479) #21	PLEKHA1 (ENSPANG00000020481) #22	HTRA1 (ENSPANG00000020482) #23	ENSPANG00000020483 #27	ENSPANG00000037364	SPADH (ENSPANG00000044363)	C10orf120 (ENSPANG00000046689) #28	CUZD1 (ENSPANG00000020487) #32	FAM24A (ENSPANG00000020495)	C10orf88 (ENSPANG00000020468) #34	PSTK (ENSPANG00000020470) #35	IKZF5 (ENSPANG00000020471) #36	ACADSB (ENSPANG00000020466) #37	HMX3 (ENSPANG00000046945)	HMX2 (ENSPANG00000043894)	ENSPANG00000020351	GPR26 (ENSPANG00000020352)
Cercopithecinae_d	ANCESTRAL SPECIES	64	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000173066	ENSGT00940000159204 #8	ENSGT00940000154259.k.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a.i.a	ENSGT00950000183001.a.a
Sooty mangabey	MODERN SPECIES	527	TIAL1 (ENSCATG00000043838) #7	ENSCATG00000042161	BAG3 (ENSCATG00000043521) #8	ENSCATG00000036096	INPP5F (ENSCATG00000016832) #9	MCMBP (ENSCATG00000035237) #10	SEC23IP (ENSCATG00000031879) #11	ENSCATG00000039059	PLPP4 (ENSCATG00000008532) #14	WDR11 (ENSCATG00000043471) #15	FGFR2 (ENSCATG00000037271) #16	ATE1 (ENSCATG00000039070) #17	NSMCE4A (ENSCATG00000037970) #19	TACC2 (ENSCATG00000000364) #20	BTBD16 (ENSCATG00000012464) #21	PLEKHA1 (ENSCATG00000005094) #22	ARMS2 (ENSCATG00000026311)	HTRA1 (ENSCATG00000038268) #23	DMBT1 (ENSCATG00000044187) #27	C10orf120 (ENSCATG00000033658) #28	ENSCATG00000036116	FAM24B (ENSCATG00000043992)	FAM24A (ENSCATG00000037982)	C10orf88 (ENSCATG00000038112) #34	PSTK (ENSCATG00000038639) #35	IKZF5 (ENSCATG00000035777) #36	ACADSB (ENSCATG00000035743) #37	HMX3 (ENSCATG00000037673)	HMX2 (ENSCATG00000017605)	ENSCATG00000045202	ENSCATG00000012261
Drill	MODERN SPECIES	1373	RGS10 (ENSMLEG00000028058)	TIAL1 (ENSMLEG00000034719) #7	ENSMLEG00000036021	ENSMLEG00000042707	BAG3 (ENSMLEG00000040350) #8	INPP5F (ENSMLEG00000008038) #9	MCMBP (ENSMLEG00000037646) #10	SEC23IP (ENSMLEG00000030208) #11	PLPP4 (ENSMLEG00000039049) #14	WDR11 (ENSMLEG00000041010) #15	FGFR2 (ENSMLEG00000027189) #16	ATE1 (ENSMLEG00000029782) #17	NSMCE4A (ENSMLEG00000024885) #19	TACC2 (ENSMLEG00000044190) #20	BTBD16 (ENSMLEG00000042190) #21	PLEKHA1 (ENSMLEG00000036811) #22	ARMS2 (ENSMLEG00000028887)	HTRA1 (ENSMLEG00000028778) #23
Vervet Monkey	MODERN SPECIES	28	PRDX3 (ENSCSAG00000004753)	GRK5 (ENSCSAG00000004748)	RGS10 (ENSCSAG00000004742)	TIAL1 (ENSCSAG00000004734) #7	BAG3 (ENSCSAG00000004728) #8	INPP5F (ENSCSAG00000004724) #9	MCMBP (ENSCSAG00000004719) #10	SEC23IP (ENSCSAG00000004713) #11	PLPP4 (ENSCSAG00000004702) #14	WDR11 (ENSCSAG00000004694) #15	FGFR2 (ENSCSAG00000004685) #16	ATE1 (ENSCSAG00000004660) #17	NSMCE4A (ENSCSAG00000004638) #19	TACC2 (ENSCSAG00000004625) #20	BTBD16 (ENSCSAG00000004617) #21	PLEKHA1 (ENSCSAG00000004609) #22	HTRA1 (ENSCSAG00000004604) #23	ENSCSAG00000004600 #27	C10orf120 (ENSCSAG00000004594) #28	CUZD1 (ENSCSAG00000004585) #32	FAM24B (ENSCSAG00000004575)	FAM24A (ENSCSAG00000004571)	C10orf88 (ENSCSAG00000004568) #34	PSTK (ENSCSAG00000004563) #35	IKZF5 (ENSCSAG00000004558) #36	ACADSB (ENSCSAG00000004557) #37	HMX3 (ENSCSAG00000004552)	HMX2 (ENSCSAG00000004550)	BUB3 (ENSCSAG00000004547)	GPR26 (ENSCSAG00000004541)	CPXM2 (ENSCSAG00000004539)
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00910000147084	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000154259.k.a.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00650000095054	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00390000017384.h #34	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286
Cebidae	ANCESTRAL SPECIES	17	ENSGT00910000147084	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000154259.k.a.a	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000012112	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00910000148125	ENSGT00910000147084	ENSGT00940000160482 #7	ENSGT00500000044913.b	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926.b #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000154525.b.a #32	ENSGT00940000163005.d	ENSGT00940000163005.c	ENSGT00390000017384.g #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a	ENSGT00940000156414
Bolivian squirrel monkey	MODERN SPECIES	47	RGS10 (ENSSBOG00000023795)	ENSSBOG00000028139	TIAL1 (ENSSBOG00000028408) #7	BAG3 (ENSSBOG00000033183) #8	INPP5F (ENSSBOG00000034456) #9	MCMBP (ENSSBOG00000029485) #10	SEC23IP (ENSSBOG00000028088) #11	ENSSBOG00000028957	PLPP4 (ENSSBOG00000027942) #14	WDR11 (ENSSBOG00000034391) #15	FGFR2 (ENSSBOG00000016345) #16	ATE1 (ENSSBOG00000033557) #17	NSMCE4A (ENSSBOG00000034475) #19	TACC2 (ENSSBOG00000034773) #20	BTBD16 (ENSSBOG00000030401) #21	PLEKHA1 (ENSSBOG00000032388) #22	HTRA1 (ENSSBOG00000022966) #23	ENSSBOG00000033598 #27	C10orf120 (ENSSBOG00000021674) #28	CUZD1 (ENSSBOG00000019778) #32	FAM24B (ENSSBOG00000034235)	FAM24A (ENSSBOG00000031885)	C10orf88 (ENSSBOG00000030071) #34	PSTK (ENSSBOG00000035695) #35	IKZF5 (ENSSBOG00000021900) #36	ACADSB (ENSSBOG00000026062) #37	HMX3 (ENSSBOG00000023320)	HMX2 (ENSSBOG00000021232)	BUB3 (ENSSBOG00000025883)	GPR26 (ENSSBOG00000029415)	CPXM2 (ENSSBOG00000036010)
Capuchin	MODERN SPECIES	396							PPFIBP2 (ENSCCAG00000036318)	CYB5R2 (ENSCCAG00000036771)	PLPP4 (ENSCCAG00000035818) #14	WDR11 (ENSCCAG00000024726) #15	FGFR2 (ENSCCAG00000028642) #16	ATE1 (ENSCCAG00000028520) #17	NSMCE4A (ENSCCAG00000037714) #19	TACC2 (ENSCCAG00000028861) #20	BTBD16 (ENSCCAG00000036281) #21	PLEKHA1 (ENSCCAG00000026152) #22
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	3	MCMBP (ENSCJAG00000020390) #10	INPP5F (ENSCJAG00000020379) #9	ENSCJAG00000020378	BAG3 (ENSCJAG00000020374) #8	ENSCJAG00000087246	ENSCJAG00000013460	PLPP4 (ENSCJAG00000006402) #14	ENSCJAG00000071848	WDR11 (ENSCJAG00000006430) #15	ENSCJAG00000081690	ENSCJAG00000074755	FGFR2 (ENSCJAG00000001438) #16	ATE1 (ENSCJAG00000001411) #17	TACC2 (ENSCJAG00000001289) #20	BTBD16 (ENSCJAG00000001276) #21	ENSCJAG00000001251 #22	HTRA1 (ENSCJAG00000001226) #23	ENSCJAG00000082859 #27	ENSCJAG00000001157 #27	SPADH (ENSCJAG00000067245)	C10orf120 (ENSCJAG00000012735) #28	ENSCJAG00000061021 #30	CUZD1 (ENSCJAG00000001132) #32	FAM24B (ENSCJAG00000077353)	FAM24A (ENSCJAG00000086502)	C10orf88 (ENSCJAG00000001125) #34	PSTK (ENSCJAG00000001117) #35	IKZF5 (ENSCJAG00000065257) #36	ACADSB (ENSCJAG00000001092) #37	HMX3 (ENSCJAG00000085658)	HMX2 (ENSCJAG00000001081)
Marmoset	MODERN SPECIES	2	PPP6R3 (ENSCJAG00000015752)	LRP5 (ENSCJAG00000015736)	C11orf24 (ENSCJAG00000043469)	KMT5B (ENSCJAG00000015727)	ENSCJAG00000022979	CHKA (ENSCJAG00000015722)	TCIRG1 (ENSCJAG00000015705)	ENSCJAG00000015686	ALDH3B1 (ENSCJAG00000015676)	UNC93B1 (ENSCJAG00000045026)	ALDH3B2 (ENSCJAG00000077097)	ACY3 (ENSCJAG00000070289)	TBX10 (ENSCJAG00000071274)	ENSCJAG00000041608	NDUFV1 (ENSCJAG00000000839)	ENSCJAG00000031574 #22	ENSCJAG00000000879	ENSCJAG00000000379	CABP2 (ENSCJAG00000000890)	CDK2AP2 (ENSCJAG00000044071)	PITPNM1 (ENSCJAG00000000908)	AIP (ENSCJAG00000000929)	TMEM134 (ENSCJAG00000000933)	CABP4 (ENSCJAG00000000939)	GPR152 (ENSCJAG00000000943)	CORO1B (ENSCJAG00000000945)	PTPRCAP (ENSCJAG00000000963)	RPS6KB2 (ENSCJAG00000000967)	CARNS1 (ENSCJAG00000000981)	TBC1D10C (ENSCJAG00000000998)	ENSCJAG00000000983
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	802								PLPP4 (ENSANAG00000013394) #14	WDR11 (ENSANAG00000034731) #15	FGFR2 (ENSANAG00000030066) #16	ENSANAG00000017137	ATE1 (ENSANAG00000036713) #17	NSMCE4A (ENSANAG00000021849) #19	TACC2 (ENSANAG00000035884) #20	BTBD16 (ENSANAG00000028604) #21	PLEKHA1 (ENSANAG00000026667) #22	ARMS2 (ENSANAG00000024354)	HTRA1 (ENSANAG00000023219) #23	ENSANAG00000030579 #27	C10orf120 (ENSANAG00000027570) #28	CUZD1 (ENSANAG00000021440) #32	FAM24B (ENSANAG00000020828)	ENSANAG00000018257 #34	FAM24A (ENSANAG00000014047)	C10orf88 (ENSANAG00000020459) #34	PSTK (ENSANAG00000037855) #35	IKZF5 (ENSANAG00000032569) #36	ACADSB (ENSANAG00000029052) #37	HMX3 (ENSANAG00000024547)	HMX2 (ENSANAG00000036077)	BUB3 (ENSANAG00000034868)
Mas night monkey	MODERN SPECIES	966	ENSANAG00000023536	ZNF592 (ENSANAG00000023866)	ALPK3 (ENSANAG00000023039)	SLC28A1 (ENSANAG00000026896)	PDE8A (ENSANAG00000024243)	AKAP13 (ENSANAG00000027868)	KLHL25 (ENSANAG00000018034)	CDO1 (ENSANAG00000025385)	ATG12 (ENSANAG00000023055)	ENSANAG00000023676	LVRN (ENSANAG00000027157)	ARL14EPL (ENSANAG00000023687)	ENSANAG00000023278	ENSANAG00000024151	COMMD10 (ENSANAG00000022465)	ENSANAG00000025676 #22	ENSANAG00000026968	SEMA6A (ENSANAG00000025286)	ENSANAG00000024194	ENSANAG00000024770	ENSANAG00000026934	ENSANAG00000022169	DMXL1 (ENSANAG00000028002)	TNFAIP8 (ENSANAG00000023898)	HSD17B4 (ENSANAG00000026074)	FAM170A (ENSANAG00000022413)	ENSANAG00000022201	PRR16 (ENSANAG00000022482)	SRFBP1 (ENSANAG00000022485)	LOX (ENSANAG00000022215)	ENSANAG00000026917
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000165716	ENSGT00940000154525.b.a #32	ENSGT00940000164044	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a
Tree shrew	MODERN SPECIES	216																PLEKHA1 (ENSTBEG00000016034) #22
Glires	ANCESTRAL SPECIES	16	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT01010000224541	ENSGT00940000162108.tb #30	ENSGT00940000165716	ENSGT00940000154525.b.a #32	ENSGT00940000171163	ENSGT00940000164044	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392
Lagomorpha	ANCESTRAL SPECIES	17	ENSGT00940000153430.a.b	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27
Pika	MODERN SPECIES	2268													NSMCE4A (ENSOPRG00000011986) #19	TACC2 (ENSOPRG00000012006) #20	BTBD16 (ENSOPRG00000012074) #21	PLEKHA1 (ENSOPRG00000012090) #22	HTRA1 (ENSOPRG00000012106) #23
Rabbit	MODERN SPECIES	9	RGS10 (ENSOCUG00000014618)	TIAL1 (ENSOCUG00000003783) #7	BAG3 (ENSOCUG00000011696) #8	INPP5F (ENSOCUG00000002226) #9	MCMBP (ENSOCUG00000002235) #10	SEC23IP (ENSOCUG00000003141) #11	ENSOCUG00000017933 #14	WDR11 (ENSOCUG00000013912) #15	ENSOCUG00000001764	FGFR2 (ENSOCUG00000007069) #16	ATE1 (ENSOCUG00000003373) #17	NSMCE4A (ENSOCUG00000000820) #19	ENSOCUG00000026111 #20	ENSOCUG00000000821 #20	BTBD16 (ENSOCUG00000000825) #21	PLEKHA1 (ENSOCUG00000002100) #22	HTRA1 (ENSOCUG00000013478) #23	ENSOCUG00000013488 #27	ENSOCUG00000032261	C10orf120 (ENSOCUG00000006564) #28	CYP2E1 (ENSOCUG00000007724)	ENSOCUG00000007271	ENSOCUG00000016735	ENSOCUG00000026878	ENSOCUG00000023927	MTG1 (ENSOCUG00000000484)	PAOX (ENSOCUG00000000479)	ECHS1 (ENSOCUG00000000473)	ENSOCUG00000000470	ENSOCUG00000029628	ADAM8 (ENSOCUG00000001216)
Rodentia	ANCESTRAL SPECIES	16	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00390000005511 #28	ENSGT00950000183145.E #27	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a	ENSGT00940000156414
Sciuridae	ANCESTRAL SPECIES	21	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00390000005511 #28	ENSGT00950000183145.E #27	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a	ENSGT00940000156414
Eurasian red squirrel	MODERN SPECIES	13	BAG3 (ENSSVLG00005002726) #8	INPP5F (ENSSVLG00005002590) #9	MCMBP (ENSSVLG00005002533) #10	SEC23IP (ENSSVLG00005002496) #11	PLPP4 (ENSSVLG00005002461) #14	WDR11 (ENSSVLG00005002429) #15	FGFR2 (ENSSVLG00005002254) #16	ENSSVLG00005002095	ATE1 (ENSSVLG00005002012) #17	ENSSVLG00005001969 #18	ENSSVLG00005001936 #19	ENSSVLG00005001901 #20	ENSSVLG00005001566 #20	BTBD16 (ENSSVLG00005001375) #21	ENSSVLG00005001346	PLEKHA1 (ENSSVLG00005001323) #22	HTRA1 (ENSSVLG00005001280) #23	ENSSVLG00005001252 #28	ENSSVLG00005001198 #27	ENSSVLG00005001120 #30	CUZD1 (ENSSVLG00005001077) #32	ENSSVLG00005001055 #34	ENSSVLG00005001041	ENSSVLG00005001016 #34	PSTK (ENSSVLG00005000980) #35	IKZF5 (ENSSVLG00005000956) #36	ACADSB (ENSSVLG00005000924) #37	HMX3 (ENSSVLG00005000902)	HMX2 (ENSSVLG00005000888)	BUB3 (ENSSVLG00005000858)	ENSSVLG00005000813
Marmotini	DUPLICATION
Marmotini	ANCESTRAL SPECIES	16	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157.k #22	ENSGT00940000156955 #23	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a.m.a	ENSGT00950000183001.a.a	ENSGT00940000156414	ENSGT00390000004719
Marmotini_b	ANCESTRAL SPECIES	27	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157.k #22	ENSGT00940000156955 #23	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a.m.a	ENSGT00950000183001.a.a	ENSGT00940000156414	ENSGT00390000004719
Arctic ground squirrel	MODERN SPECIES	28	TIAL1 (ENSUPAG00010006642) #7	BAG3 (ENSUPAG00010006628) #8	INPP5F (ENSUPAG00010006608) #9	MCMBP (ENSUPAG00010006578) #10	SEC23IP (ENSUPAG00010006554) #11	ENSUPAG00010006552	PLPP4 (ENSUPAG00010006532) #14	WDR11 (ENSUPAG00010006463) #15	FGFR2 (ENSUPAG00010006384) #16	ATE1 (ENSUPAG00010006266) #17	ENSUPAG00010006255 #18	NSMCE4A (ENSUPAG00010006240) #19	TACC2 (ENSUPAG00010005112) #20	BTBD16 (ENSUPAG00010004978) #21	ENSUPAG00010004971	ENSUPAG00010004924 #22	HTRA1 (ENSUPAG00010004911) #23	ENSUPAG00010004901 #28	ENSUPAG00010004894	ENSUPAG00010004857 #27	CUZD1 (ENSUPAG00010004852) #32	ENSUPAG00010004845	ENSUPAG00010004823 #34	PSTK (ENSUPAG00010004819) #35	IKZF5 (ENSUPAG00010004809) #36	ACADSB (ENSUPAG00010004778) #37	HMX3 (ENSUPAG00010004771)	HMX2 (ENSUPAG00010004763)	BUB3 (ENSUPAG00010004752)	GPR26 (ENSUPAG00010004746)	CPXM2 (ENSUPAG00010004732)
Squirrel	MODERN SPECIES	86	GRK5 (ENSSTOG00000002553)	RGS10 (ENSSTOG00000004925)	TIAL1 (ENSSTOG00000025095) #7	BAG3 (ENSSTOG00000023267) #8	ENSSTOG00000032848	INPP5F (ENSSTOG00000005115) #9	MCMBP (ENSSTOG00000005145) #10	SEC23IP (ENSSTOG00000005178) #11	PLPP4 (ENSSTOG00000006962) #14	WDR11 (ENSSTOG00000006935) #15	FGFR2 (ENSSTOG00000003979) #16	ATE1 (ENSSTOG00000027779) #17	NSMCE4A (ENSSTOG00000011112) #19	ENSSTOG00000022252 #20	BTBD16 (ENSSTOG00000015270) #21	ENSSTOG00000010191 #22	HTRA1 (ENSSTOG00000026475) #23	ENSSTOG00000034031	ENSSTOG00000026812 #30	CUZD1 (ENSSTOG00000008183) #32	ENSSTOG00000030864	ENSSTOG00000033040 #34	PSTK (ENSSTOG00000006955) #35	IKZF5 (ENSSTOG00000028669) #36	ACADSB (ENSSTOG00000006965) #37	HMX3 (ENSSTOG00000003981)	HMX2 (ENSSTOG00000000994)	ENSSTOG00000021785	GPR26 (ENSSTOG00000026881)	CPXM2 (ENSSTOG00000020281)	CHST15 (ENSSTOG00000020654)
Alpin marmot	MODERN SPECIES	53	TIAL1 (ENSMMMG00000000560) #7	BAG3 (ENSMMMG00000000616) #8	INPP5F (ENSMMMG00000000681) #9	MCMBP (ENSMMMG00000000744) #10	SEC23IP (ENSMMMG00000000778) #11	PLPP4 (ENSMMMG00000000832) #14	ENSMMMG00000000883	ENSMMMG00000000896	WDR11 (ENSMMMG00000000912) #15	FGFR2 (ENSMMMG00000000986) #16	ATE1 (ENSMMMG00000001092) #17	NSMCE4A (ENSMMMG00000001206) #19	ENSMMMG00000001271 #20	ENSMMMG00000001553 #20	BTBD16 (ENSMMMG00000001579) #21	ENSMMMG00000001679 #22	ENSMMMG00000001757	ENSMMMG00000001770 #23	ENSMMMG00000001790 ##27	C10orf120 (ENSMMMG00000001925) #28	ENSMMMG00000001938 #30	ENSMMMG00000001979 #30	CUZD1 (ENSMMMG00000001993) #32	PSTK (ENSMMMG00000002014) #35	IKZF5 (ENSMMMG00000002033) #36	ACADSB (ENSMMMG00000002052) #37	HMX2 (ENSMMMG00000002076)	ENSMMMG00000002090	GPR26 (ENSMMMG00000002142)	CPXM2 (ENSMMMG00000002158)	CHST15 (ENSMMMG00000002233)
Marmotini	ANCESTRAL SPECIES	29										ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00950000186331	ENSGT00940000157039.b	ENSGT00940000155157.l #22	ENSGT00390000013956	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709	ENSGT00390000006601	ENSGT00940000158106	ENSGT00940000153313.B	ENSGT01070000253816.a.a.b	ENSGT00940000159907	ENSGT00390000006788.a.b	ENSGT00390000005130	ENSGT00390000000693	ENSGT00940000162467.b	ENSGT00940000163647
Marmotini_b	ANCESTRAL SPECIES	240											ENSGT00940000155454	ENSGT00940000155219	ENSGT00480000042679.b.b	ENSGT00390000013700	ENSGT00940000157039.b	ENSGT00940000155157.l #22	ENSGT00390000013956	ENSGT00940000155175.A	ENSGT00940000156877	ENSGT00950000183174.B.b	ENSGT00390000011709
Squirrel	MODERN SPECIES	267											OLFM4 (ENSSTOG00000019753)	PCDH8 (ENSSTOG00000022966)	CNMD (ENSSTOG00000004192)	SUGT1 (ENSSTOG00000004159)	ELF1 (ENSSTOG00000007700)	ENSSTOG00000006234 #22	WBP4 (ENSSTOG00000024976)	KBTBD7 (ENSSTOG00000029195)	MTRF1 (ENSSTOG00000021682)	NAA16 (ENSSTOG00000002798)	RGCC (ENSSTOG00000025358)
Arctic ground squirrel	MODERN SPECIES	216											OLFM4 (ENSUPAG00010022208)	PCDH8 (ENSUPAG00010022211)	CNMD (ENSUPAG00010022215)	SUGT1 (ENSUPAG00010022218)	ELF1 (ENSUPAG00010022223)	ENSUPAG00010022225 #22	WBP4 (ENSUPAG00010022226)	KBTBD7 (ENSUPAG00010022229)	MTRF1 (ENSUPAG00010022231)	NAA16 (ENSUPAG00010022237)	RGCC (ENSUPAG00010022251)
Alpin marmot	MODERN SPECIES	13										OLFM4 (ENSMMMG00000000484)	PCDH8 (ENSMMMG00000000439)	CNMD (ENSMMMG00000000405)	SUGT1 (ENSMMMG00000000341)	ENSMMMG00000000315	ELF1 (ENSMMMG00000000224)	ENSMMMG00000000196 #22	WBP4 (ENSMMMG00000000179)	KBTBD7 (ENSMMMG00000000126)	MTRF1 (ENSMMMG00000000091)	NAA16 (ENSMMMG00000000060)	RGCC (ENSMMMG00000023619)	VWA8 (ENSMMMG00000023535)	DGKH (ENSMMMG00000023481)	AKAP11 (ENSMMMG00000023475)	TNFSF11 (ENSMMMG00000023474)	ENSMMMG00000023473	EPSTI1 (ENSMMMG00000023471)	ENOX1 (ENSMMMG00000023468)	ENSMMMG00000023467	CCDC122 (ENSMMMG00000023465)	LACC1 (ENSMMMG00000023463)
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000154962.B	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a.o	ENSGT00950000183001.a.a	ENSGT00940000156414	ENSGT00390000004719
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	4	SEC23IP (ENSHGLG00000013752) #11	ENSHGLG00000045415	PLPP4 (ENSHGLG00000012927) #14	ENSHGLG00000044013	WDR11 (ENSHGLG00000010871) #15	ENSHGLG00000011201 #16	ENSHGLG00000032507	ENSHGLG00000006514	ENSHGLG00000045128	ENSHGLG00000018201 #17	NSMCE4A (ENSHGLG00000013057) #19	ENSHGLG00000035516 #20	ENSHGLG00000014774 #20	BTBD16 (ENSHGLG00000010643) #21	ENSHGLG00000043818	ENSHGLG00000009809 #22	HTRA1 (ENSHGLG00000011897) #23	ENSHGLG00000014651 #27	ENSHGLG00000045576	ENSHGLG00000041620 #30	ENSHGLG00000014383	ENSHGLG00000047493	ENSHGLG00000011520	ENSHGLG00000044519	ENSHGLG00000039988	ENSHGLG00000033348	ENSHGLG00000014509	TM9SF3 (ENSHGLG00000012450)	TLL2 (ENSHGLG00000013626)	OPALIN (ENSHGLG00000042100)	DNTT (ENSHGLG00000009905)
Naked mole-rat female	MODERN SPECIES	21	SEMA6B (ENSHGLG00000008078)	LRG1 (ENSHGLG00000008746)	PLIN5 (ENSHGLG00000009083)	PLIN4 (ENSHGLG00000035695)	HDGFL2 (ENSHGLG00000010821)	UBXN6 (ENSHGLG00000011971)	ENSHGLG00000035324	CHAF1A (ENSHGLG00000005439)	SH3GL1 (ENSHGLG00000005623)	MPND (ENSHGLG00000006669)	STAP2 (ENSHGLG00000008727)	FSD1 (ENSHGLG00000006238)	TMIGD2 (ENSHGLG00000036449)	SHD (ENSHGLG00000007108)	YJU2 (ENSHGLG00000008096)	ENSHGLG00000005526 #22	ANKRD24 (ENSHGLG00000010865)	SIRT6 (ENSHGLG00000006696)	CREB3L3 (ENSHGLG00000050546)	MAP2K2 (ENSHGLG00000009089)	ZBTB7A (ENSHGLG00000011811)	PIAS4 (ENSHGLG00000006172)	ENSHGLG00000007881	DAPK3 (ENSHGLG00000009769)	ENSHGLG00000015025	GADD45B (ENSHGLG00000044805)	GNG7 (ENSHGLG00000017287)	DIRAS1 (ENSHGLG00000013381)	SLC39A3 (ENSHGLG00000033652)	SGTA (ENSHGLG00000018547)	ENSHGLG00000040783
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000154962.B	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035.e.a #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a.o	ENSGT00950000183001.a.a	ENSGT00940000156414	ENSGT00390000004719
Guinea pig	MODERN SPECIES	1	PRDX3 (ENSCPOG00000039588)	GRK5 (ENSCPOG00000007453)	RGS10 (ENSCPOG00000004325)	ENSCPOG00000006074	BAG3 (ENSCPOG00000007549) #8	INPP5F (ENSCPOG00000009019) #9	MCMBP (ENSCPOG00000009028) #10	SEC23IP (ENSCPOG00000004752) #11	PLPP4 (ENSCPOG00000012587) #14	WDR11 (ENSCPOG00000014291) #15	FGFR2 (ENSCPOG00000008833) #16	ATE1 (ENSCPOG00000025966) #17	NSMCE4A (ENSCPOG00000000625) #19	ENSCPOG00000000626 #20	BTBD16 (ENSCPOG00000000630) #21	PLEKHA1 (ENSCPOG00000000631) #22	HTRA1 (ENSCPOG00000000632) #23	ENSCPOG00000001267 #30	CUZD1 (ENSCPOG00000003649) #32	C10orf88 (ENSCPOG00000006675) #34	PSTK (ENSCPOG00000030265) #35	ENSCPOG00000037527 #36	ACADSB (ENSCPOG00000012372) #37	HMX3 (ENSCPOG00000011950)	HMX2 (ENSCPOG00000032283)	BUB3 (ENSCPOG00000011957)	GPR26 (ENSCPOG00000037735)	CPXM2 (ENSCPOG00000009383)	CHST15 (ENSCPOG00000038052)	OAT (ENSCPOG00000010340)	LHPP (ENSCPOG00000005337)
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00940000153430.a.b	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602 #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035.e.a #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a.o	ENSGT00950000183001.a.a	ENSGT00940000156414	ENSGT00390000004719
Long-tailed chinchilla	MODERN SPECIES	184												ATE1 (ENSCLAG00000002097) #17	NSMCE4A (ENSCLAG00000002459) #19	TACC2 (ENSCLAG00000002687) #20	BTBD16 (ENSCLAG00000005827) #21	PLEKHA1 (ENSCLAG00000006674) #22	HTRA1 (ENSCLAG00000002509) #23	ENSCLAG00000002836 #30	CUZD1 (ENSCLAG00000003061) #32	ENSCLAG00000002221	ENSCLAG00000002572	C10orf88 (ENSCLAG00000002628) #34	PSTK (ENSCLAG00000002960) #35	ENSCLAG00000002888 #36	ACADSB (ENSCLAG00000003369) #37	HMX3 (ENSCLAG00000004802)	HMX2 (ENSCLAG00000005166)	BUB3 (ENSCLAG00000005834)	GPR26 (ENSCLAG00000001930)	CPXM2 (ENSCLAG00000001957)	CHST15 (ENSCLAG00000002182)
Degu	DUPLICATION
Degu	MODERN SPECIES	51	ENSODEG00000020513	ENSODEG00000017620	ENSODEG00000017622	PLPP4 (ENSODEG00000017787) #14	ENSODEG00000017528	WDR11 (ENSODEG00000017999) #15	ENSODEG00000017729	ENSODEG00000017521	FGFR2 (ENSODEG00000017727) #16	ENSODEG00000017613	ATE1 (ENSODEG00000017714) #17	NSMCE4A (ENSODEG00000017586) #19	ENSODEG00000017758 #20	BTBD16 (ENSODEG00000017181) #21	ENSODEG00000017646	ENSODEG00000017854 #22	HTRA1 (ENSODEG00000017523) #23	ENSODEG00000017538 #27	ENSODEG00000017508	ENSODEG00000017380 #30	CUZD1 (ENSODEG00000017550) #32	C10orf88 (ENSODEG00000017572) #34	PSTK (ENSODEG00000017417) #35	ENSODEG00000017599 #36	ACADSB (ENSODEG00000017347) #37	HMX3 (ENSODEG00000017303)	HMX2 (ENSODEG00000017125)	ENSODEG00000017376	ENSODEG00000020472	GPR26 (ENSODEG00000017488)	CPXM2 (ENSODEG00000017290)
Degu	MODERN SPECIES	122											ENSODEG00000006114	ZPLD1 (ENSODEG00000007525)	ENSODEG00000007067	ENSODEG00000005667	NFKBIZ (ENSODEG00000005703)	ENSODEG00000005326 #22	ENSODEG00000007096	NXPE3 (ENSODEG00000006809)	ENSODEG00000006503	ENSODEG00000005842	ZBTB11 (ENSODEG00000006262)	ENSODEG00000019290	ENSODEG00000005207	SENP7 (ENSODEG00000006738)	ENSODEG00000005550	IMPG2 (ENSODEG00000006079)	ABI3BP (ENSODEG00000005855)	ENSODEG00000005535	ADGRG7 (ENSODEG00000005676)	TMEM45A (ENSODEG00000005098)	ENSODEG00000006299
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602.g.a #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a
Kangaroo rat	MODERN SPECIES	377	Grk5 (ENSDORG00000008496)	Rgs10 (ENSDORG00000003521)	Tial1 (ENSDORG00000010683) #7	Bag3 (ENSDORG00000011527) #8	Inpp5f (ENSDORG00000003458) #9	Mcmbp (ENSDORG00000008011) #10	ENSDORG00000027445 #11	ENSDORG00000008015 #11	Plpp4 (ENSDORG00000002515) #14	Wdr11 (ENSDORG00000003077) #15	Fgfr2 (ENSDORG00000005639) #16	Ate1 (ENSDORG00000011669) #17	Nsmce4a (ENSDORG00000003880) #19	ENSDORG00000003881 #20	Btbd16 (ENSDORG00000005110) #21	Plekha1 (ENSDORG00000024017) #22	Htra1 (ENSDORG00000015731) #23	ENSDORG00000007072 #30	Cuzd1 (ENSDORG00000007077) #32	Fam24a (ENSDORG00000010469)	2310057M21Rik (ENSDORG00000028211) #34	Pstk (ENSDORG00000011804) #35	Ikzf5 (ENSDORG00000030138) #36	Acadsb (ENSDORG00000001496) #37	Hmx3 (ENSDORG00000002862)	Hmx2 (ENSDORG00000028020)	Bub3 (ENSDORG00000002864)	Gpr26 (ENSDORG00000013184)	Cpxm2 (ENSDORG00000013185)	Chst15 (ENSDORG00000025969)	Oat (ENSDORG00000013083)
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602.g.b #11	ENSGT00940000156602.g.a #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a
Lesser Egyptian jerboa	MODERN SPECIES	70	ENSJJAG00000005398 #7	Bag3 (ENSJJAG00000013499) #8	ENSJJAG00000010122	ENSJJAG00000016414	Inpp5f (ENSJJAG00000020126) #9	Mcmbp (ENSJJAG00000022939) #10	ENSJJAG00000021258 #11	ENSJJAG00000014744 #11	Plpp4 (ENSJJAG00000022845) #14	Wdr11 (ENSJJAG00000014160) #15	Fgfr2 (ENSJJAG00000012859) #16	Ate1 (ENSJJAG00000013127) #17	Nsmce4a (ENSJJAG00000020152) #19	ENSJJAG00000015501 #20	Btbd16 (ENSJJAG00000012283) #21	Plekha1 (ENSJJAG00000019344) #22	Htra1 (ENSJJAG00000012131) #23	4933402N03Rik (ENSJJAG00000001575) #28	ENSJJAG00000011591 #30	Cuzd1 (ENSJJAG00000022053) #32	ENSJJAG00000018148	Fam24a (ENSJJAG00000011583)	2310057M21Rik (ENSJJAG00000022848) #34	Pstk (ENSJJAG00000021183) #35	Ikzf5 (ENSJJAG00000000850) #36	ENSJJAG00000017926 #37	Hmx3 (ENSJJAG00000017208)	Hmx2 (ENSJJAG00000021150)	ENSJJAG00000019122	Gpr26 (ENSJJAG00000024093)	Cpxm2 (ENSJJAG00000024326)
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602.g.b #11	ENSGT00940000156602.g.a #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a
Upper Galilee mountains blind mole rat	MODERN SPECIES	556	Grk5 (ENSNGAG00000022629)	Rgs10 (ENSNGAG00000022036)	Tial1 (ENSNGAG00000020427) #7	Bag3 (ENSNGAG00000018737) #8	Inpp5f (ENSNGAG00000016489) #9	Mcmbp (ENSNGAG00000001050) #10	ENSNGAG00000022868 #11	ENSNGAG00000022208 #11	Plpp4 (ENSNGAG00000018055) #14	Wdr11 (ENSNGAG00000001781) #15	Fgfr2 (ENSNGAG00000017837) #16	Ate1 (ENSNGAG00000011904) #17	Nsmce4a (ENSNGAG00000009717) #19	ENSNGAG00000012564 #20	Btbd16 (ENSNGAG00000019177) #21	Plekha1 (ENSNGAG00000016064) #22	Htra1 (ENSNGAG00000014707) #23	4933402N03Rik (ENSNGAG00000013572) #28	ENSNGAG00000009762 #30	Cuzd1 (ENSNGAG00000005205) #32	ENSNGAG00000001948	ENSNGAG00000000938	2310057M21Rik (ENSNGAG00000020488) #34	Pstk (ENSNGAG00000018855) #35	Ikzf5 (ENSNGAG00000014976) #36	Acadsb (ENSNGAG00000003415) #37	Hmx3 (ENSNGAG00000000752)	Hmx2 (ENSNGAG00000018683)	Bub3 (ENSNGAG00000013186)	Gpr26 (ENSNGAG00000012118)	Cpxm2 (ENSNGAG00000020180)
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602.g.b #11	ENSGT00940000156602.g.a #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602.g.b #11	ENSGT00940000156602.g.a #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00940000171163	ENSGT00940000164044.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602.g.a #11	ENSGT00940000156602.g.b #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a	ENSGT00940000156414
Northern American deer mouse	MODERN SPECIES		Tial1 (ENSPEMG00000014538) #7	Bag3 (ENSPEMG00000016897) #8	Inpp5f (ENSPEMG00000023406) #9	Mcmbp (ENSPEMG00000021598) #10	Sec23ip (ENSPEMG00000022060) #11	ENSPEMG00000025267	Plpp4 (ENSPEMG00000022713) #14	Wdr11 (ENSPEMG00000022330) #15	Fgfr2 (ENSPEMG00000014436) #16	Ate1 (ENSPEMG00000022740) #17	ENSPEMG00000025302 #18	Nsmce4a (ENSPEMG00000021690) #19	ENSPEMG00000009363 #20	ENSPEMG00000030243 #20	Btbd16 (ENSPEMG00000021258) #21	Plekha1 (ENSPEMG00000021169) #22	Htra1 (ENSPEMG00000022401) #23	ENSPEMG00000028257 #27	ENSPEMG00000024600 #27	4933402N03Rik (ENSPEMG00000021538) #28	Cdcp3 (ENSPEMG00000020751) #30	Cuzd1 (ENSPEMG00000022588) #32	Fam24a (ENSPEMG00000031419)	2310057M21Rik (ENSPEMG00000020879) #34	Pstk (ENSPEMG00000020718) #35	Ikzf5 (ENSPEMG00000025067) #36	Acadsb (ENSPEMG00000023029) #37	Hmx3 (ENSPEMG00000020746)	Hmx2 (ENSPEMG00000020567)	Bub3 (ENSPEMG00000022008)	Gpr26 (ENSPEMG00000021661)
Prairie vole	MODERN SPECIES	16	Rusf1 (ENSMOCG00000021936)	Rgs10 (ENSMOCG00000011142)	Tial1 (ENSMOCG00000014244) #7	Bag3 (ENSMOCG00000018609) #8	Inpp5f (ENSMOCG00000015647) #9	Mcmbp (ENSMOCG00000019379) #10	ENSMOCG00000019551 #11	ENSMOCG00000011869 #11	Plpp4 (ENSMOCG00000012214) #14	Wdr11 (ENSMOCG00000017742) #15	Fgfr2 (ENSMOCG00000017948) #16	Ate1 (ENSMOCG00000006090) #17	Nsmce4a (ENSMOCG00000010931) #19	ENSMOCG00000005035 #20	Btbd16 (ENSMOCG00000019789) #21	Plekha1 (ENSMOCG00000017137) #22	Htra1 (ENSMOCG00000022155) #23	4933402N03Rik (ENSMOCG00000021499) #28	ENSMOCG00000002270 #30	ENSMOCG00000015698	Cuzd1 (ENSMOCG00000019620) #32	2310057M21Rik (ENSMOCG00000017003) #34	Pstk (ENSMOCG00000020657) #35	Ikzf5 (ENSMOCG00000012731) #36	Acadsb (ENSMOCG00000014741) #37	Hmx3 (ENSMOCG00000017634)	Hmx2 (ENSMOCG00000019525)	Bub3 (ENSMOCG00000022149)	Gpr26 (ENSMOCG00000010123)	Cpxm2 (ENSMOCG00000016240)	Chst15 (ENSMOCG00000000598)
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00390000000050	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602.g.b #11	ENSGT00940000156602.g.a #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00940000171163	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a	ENSGT00940000156414
Chinese hamster chok1gshd	MODERN SPECIES	401	Slc5a2 (ENSCGRG00001017676)	Rusf1 (ENSCGRG00001021809)	Rgs10 (ENSCGRG00001023110)	Tial1 (ENSCGRG00001012762) #7	Bag3 (ENSCGRG00001013021) #8	Inpp5f (ENSCGRG00001018515) #9	Mcmbp (ENSCGRG00001008541) #10	Sec23ip (ENSCGRG00001017822) #11	Plpp4 (ENSCGRG00001022754) #14	Wdr11 (ENSCGRG00001014792) #15	Fgfr2 (ENSCGRG00001015969) #16	Ate1 (ENSCGRG00001015040) #17	Nsmce4a (ENSCGRG00001024552) #19	ENSCGRG00001021443 #20	Btbd16 (ENSCGRG00001003604) #21	Plekha1 (ENSCGRG00001014871) #22	Htra1 (ENSCGRG00001020772) #23	4933402N03Rik (ENSCGRG00001021980) #28	ENSCGRG00001005841 #30	Cuzd1 (ENSCGRG00001016877) #32	ENSCGRG00001021611	ENSCGRG00001010191	2310057M21Rik (ENSCGRG00001022004) #34	Pstk (ENSCGRG00001019704) #35	Ikzf5 (ENSCGRG00001000240) #36	Acadsb (ENSCGRG00001013507) #37	Hmx3 (ENSCGRG00001013357)	Hmx2 (ENSCGRG00001013576)	Bub3 (ENSCGRG00001014854)	ENSCGRG00001022673	Gpr26 (ENSCGRG00001000638)
Golden Hamster	MODERN SPECIES	617	Rusf1 (ENSMAUG00000007110)	Rgs10 (ENSMAUG00000011265)	ENSMAUG00000008932 #7	Bag3 (ENSMAUG00000010387) #8	Inpp5f (ENSMAUG00000010345) #9	ENSMAUG00000010608 #10	ENSMAUG00000005483 #11	ENSMAUG00000006177 #11	Plpp4 (ENSMAUG00000006636) #14	Wdr11 (ENSMAUG00000008685) #15	Fgfr2 (ENSMAUG00000012248) #16	Ate1 (ENSMAUG00000007472) #17	Nsmce4a (ENSMAUG00000004938) #19	ENSMAUG00000005429 #20	Btbd16 (ENSMAUG00000006732) #21	Plekha1 (ENSMAUG00000008559) #22	Htra1 (ENSMAUG00000006347) #23	4933402N03Rik (ENSMAUG00000004597) #28	ENSMAUG00000009283 #30	Cuzd1 (ENSMAUG00000005301) #32	2310057M21Rik (ENSMAUG00000006383) #34	Pstk (ENSMAUG00000004534) #35	Ikzf5 (ENSMAUG00000004882) #36	Acadsb (ENSMAUG00000005091) #37	Hmx3 (ENSMAUG00000004458)	Hmx2 (ENSMAUG00000006087)	Gpr26 (ENSMAUG00000004635)	Cpxm2 (ENSMAUG00000009447)	Chst15 (ENSMAUG00000008576)	ENSMAUG00000004967	Oat (ENSMAUG00000006454)
Murinae	ANCESTRAL SPECIES		ENSGT00390000003648	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602.g.a #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000016534.B #18	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a
Rat	MODERN SPECIES		Rps2-ps13 (ENSRNOG00000069056)	Bag3 (ENSRNOG00000020298) #8	Inpp5f (ENSRNOG00000020388) #9	Mcmbp (ENSRNOG00000020394) #10	Sec23ip (ENSRNOG00000020411) #11	Plpp4 (ENSRNOG00000020424) #14	ENSRNOG00000066085	Wdr11 (ENSRNOG00000020430) #15	LOC102555739 (ENSRNOG00000020446)	Fgfr2 (ENSRNOG00000016374) #16	Ate1 (ENSRNOG00000024414) #17	RGD1563285 (ENSRNOG00000069173) #18	Nsmce4a (ENSRNOG00000020452) #19	Tacc2 (ENSRNOG00000020457) #20	Btbd16 (ENSRNOG00000036675) #21	Plekha1 (ENSRNOG00000020497) #22	Htra1 (ENSRNOG00000020533) #23	Dmbt1 (ENSRNOG00000020560) #27	LOC100911413 (ENSRNOG00000034038) #27	C1h10orf120 (ENSRNOG00000022900) #28	Dmbt1l1 (ENSRNOG00000022737) #30	Cuzd1 (ENSRNOG00000029945) #32	RGD1559891 (ENSRNOG00000026440)	Fam24b (ENSRNOG00000026419)	C1h10orf88 (ENSRNOG00000020597) #34	Pstk (ENSRNOG00000020605) #35	Ikzf5 (ENSRNOG00000025651) #36	Acadsb (ENSRNOG00000020624) #37	Hmx3 (ENSRNOG00000020637)	Hmx2 (ENSRNOG00000020638)	Bub3 (ENSRNOG00000020643)
Mus	ANCESTRAL SPECIES		ENSGT00390000000050	ENSGT00390000003648	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602.g.a #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a
Shrew mouse	MODERN SPECIES		Slc5a2 (MGP_PahariEiJ_G0013752)	Rusf1 (MGP_PahariEiJ_G0013753)	Rgs10 (MGP_PahariEiJ_G0013754)	Tial1 (MGP_PahariEiJ_G0013755) #7	Bag3 (MGP_PahariEiJ_G0013756) #8	Inpp5f (MGP_PahariEiJ_G0013757) #9	Mcmbp (MGP_PahariEiJ_G0013758) #10	Sec23ip (MGP_PahariEiJ_G0013759) #11	MGP_PahariEiJ_G0013760 #14	Wdr11 (MGP_PahariEiJ_G0013761) #15	Fgfr2 (MGP_PahariEiJ_G0013762) #16	Ate1 (MGP_PahariEiJ_G0013763) #17	Nsmce4a (MGP_PahariEiJ_G0013764) #19	Tacc2 (MGP_PahariEiJ_G0013765) #20	Btbd16 (MGP_PahariEiJ_G0013766) #21	Plekha1 (MGP_PahariEiJ_G0013767) #22	Htra1 (MGP_PahariEiJ_G0013768) #23	4933402N03Rik (MGP_PahariEiJ_G0013769) #28	MGP_PahariEiJ_G0013770 #30	Cuzd1 (MGP_PahariEiJ_G0013771) #32	Fam24b (MGP_PahariEiJ_G0013772)	Fam24a (MGP_PahariEiJ_G0013773)	2310057M21Rik (MGP_PahariEiJ_G0013774) #34	Pstk (MGP_PahariEiJ_G0013775) #35	Ikzf5 (MGP_PahariEiJ_G0013776) #36	Acadsb (MGP_PahariEiJ_G0013777) #37	Hmx3 (MGP_PahariEiJ_G0013778)	Hmx2 (MGP_PahariEiJ_G0013779)	Bub3 (MGP_PahariEiJ_G0013780)	Gpr26 (MGP_PahariEiJ_G0013781)	Cpxm2 (MGP_PahariEiJ_G0013782)
Mus_A	ANCESTRAL SPECIES	1	ENSGT00390000000050	ENSGT00390000003648	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602.g.a #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a
Ryukyu mouse	MODERN SPECIES	16	Slc5a2 (MGP_CAROLIEiJ_G0030545)	Rusf1 (MGP_CAROLIEiJ_G0030546)	Rgs10 (MGP_CAROLIEiJ_G0030547)	Tial1 (MGP_CAROLIEiJ_G0030548) #7	Bag3 (MGP_CAROLIEiJ_G0030549) #8	Inpp5f (MGP_CAROLIEiJ_G0030550) #9	Mcmbp (MGP_CAROLIEiJ_G0030551) #10	Sec23ip (MGP_CAROLIEiJ_G0030552) #11	Plpp4 (MGP_CAROLIEiJ_G0030553) #14	Wdr11 (MGP_CAROLIEiJ_G0030554) #15	Fgfr2 (MGP_CAROLIEiJ_G0030555) #16	Ate1 (MGP_CAROLIEiJ_G0030556) #17	Nsmce4a (MGP_CAROLIEiJ_G0030557) #19	Tacc2 (MGP_CAROLIEiJ_G0030558) #20	Btbd16 (MGP_CAROLIEiJ_G0030559) #21	MGP_CAROLIEiJ_G0030560 #22	Htra1 (MGP_CAROLIEiJ_G0030561) #23	4933402N03Rik (MGP_CAROLIEiJ_G0030562) #28	MGP_CAROLIEiJ_G0030563 #30	Cuzd1 (MGP_CAROLIEiJ_G0030564) #32	Fam24b (MGP_CAROLIEiJ_G0030565)	Fam24a (MGP_CAROLIEiJ_G0030566)	2310057M21Rik (MGP_CAROLIEiJ_G0030567) #34	Pstk (MGP_CAROLIEiJ_G0030568) #35	Ikzf5 (MGP_CAROLIEiJ_G0030569) #36	Acadsb (MGP_CAROLIEiJ_G0030570) #37	Hmx3 (MGP_CAROLIEiJ_G0030571)	Hmx2 (MGP_CAROLIEiJ_G0030572)	Bub3 (MGP_CAROLIEiJ_G0030573)	Gpr26 (MGP_CAROLIEiJ_G0030574)	Cpxm2 (MGP_CAROLIEiJ_G0030575)
Mus_B	ANCESTRAL SPECIES		ENSGT00390000000050	ENSGT00390000003648	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602.g.a #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00950000183145.E #27	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a
Mouse	MODERN SPECIES	16	Slc5a2 (ENSMUSG00000030781)	Rusf1 (ENSMUSG00000030780)	Rgs10 (ENSMUSG00000030844)	Tial1 (ENSMUSG00000030846) #7	Bag3 (ENSMUSG00000030847) #8	Inpp5f (ENSMUSG00000042105) #9	Mcmbp (ENSMUSG00000048170) #10	Sec23ip (ENSMUSG00000055319) #11	Plpp4 (ENSMUSG00000070366) #14	Wdr11 (ENSMUSG00000042055) #15	Fgfr2 (ENSMUSG00000030849) #16	Ate1 (ENSMUSG00000030850) #17	Nsmce4a (ENSMUSG00000040331) #19	Tacc2 (ENSMUSG00000030852) #20	Btbd16 (ENSMUSG00000040298) #21	Plekha1 (ENSMUSG00000040268) #22	Htra1 (ENSMUSG00000006205) #23	Dmbt1 (ENSMUSG00000047517) #27	4933402N03Rik (ENSMUSG00000013668) #28	Cdcp3 (ENSMUSG00000006204) #30	Cuzd1 (ENSMUSG00000040205) #32	Fam24b (ENSMUSG00000030858)	Fam24a (ENSMUSG00000030859)	2310057M21Rik (ENSMUSG00000040177) #34	Pstk (ENSMUSG00000063179) #35	Ikzf5 (ENSMUSG00000040167) #36	Acadsb (ENSMUSG00000030861) #37	Hmx3 (ENSMUSG00000040148)	Hmx2 (ENSMUSG00000050100)	Bub3 (ENSMUSG00000066979)	Gpr26 (ENSMUSG00000040125)
Mus_C	ANCESTRAL SPECIES	14	ENSGT00390000000050	ENSGT00390000003648	ENSGT00940000161426	ENSGT00940000160482 #7	ENSGT00940000159204 #8	ENSGT00940000155996 #9	ENSGT00390000017265 #10	ENSGT00940000156602.g.a #11	ENSGT00940000158288 #14	ENSGT00390000004068 #15	ENSGT00940000155447 #16	ENSGT00500000044926 #17	ENSGT00390000011476 #19	ENSGT00940000157052 #20	ENSGT00940000161718 #21	ENSGT00940000155157 #22	ENSGT00940000156955 #23	ENSGT00390000005511 #28	ENSGT00940000162108.tb #30	ENSGT00940000154525.b.a #32	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #34	ENSGT00390000017554 #35	ENSGT00940000155035 #36	ENSGT00940000156525 #37	ENSGT00940000158286	ENSGT00940000160392	ENSGT00950000183091.A.a	ENSGT00950000183001.a.a	ENSGT00940000156414
Steppe mouse	MODERN SPECIES	3190	ENSMSIG00000007441	Inpp5f (ENSMSIG00000007462) #9	ENSMSIG00000007565	Mcmbp (ENSMSIG00000007578) #10	Sec23ip (ENSMSIG00000007682) #11	ENSMSIG00000007730	Plpp4 (ENSMSIG00000007743) #14	ENSMSIG00000007803	Wdr11 (ENSMSIG00000007834) #15	Fgfr2 (ENSMSIG00000007996) #16	Ate1 (ENSMSIG00000008300) #17	ENSMSIG00000008533	Nsmce4a (ENSMSIG00000008558) #19	Tacc2 (ENSMSIG00000008632) #20	Btbd16 (ENSMSIG00000008853) #21	ENSMSIG00000008942 #22	Htra1 (ENSMSIG00000009092) #23
spretus	MODERN SPECIES	16	Slc5a2 (MGP_SPRETEiJ_G0031659)	Rusf1 (MGP_SPRETEiJ_G0031660)	Rgs10 (MGP_SPRETEiJ_G0031661)	Tial1 (MGP_SPRETEiJ_G0031662) #7	Bag3 (MGP_SPRETEiJ_G0031663) #8	Inpp5f (MGP_SPRETEiJ_G0031664) #9	Mcmbp (MGP_SPRETEiJ_G0031665) #10	Sec23ip (MGP_SPRETEiJ_G0031666) #11	Plpp4 (MGP_SPRETEiJ_G0031667) #14	Wdr11 (MGP_SPRETEiJ_G0031668) #15	Fgfr2 (MGP_SPRETEiJ_G0031669) #16	Ate1 (MGP_SPRETEiJ_G0031670) #17	Nsmce4a (MGP_SPRETEiJ_G0031671) #19	Tacc2 (MGP_SPRETEiJ_G0031672) #20	Btbd16 (MGP_SPRETEiJ_G0031673) #21	Plekha1 (MGP_SPRETEiJ_G0031674) #22	Htra1 (MGP_SPRETEiJ_G0031675) #23	4933402N03Rik (MGP_SPRETEiJ_G0031676) #28	MGP_SPRETEiJ_G0031677 #30	Cuzd1 (MGP_SPRETEiJ_G0031678) #32	Fam24b (MGP_SPRETEiJ_G0031679)	Fam24a (MGP_SPRETEiJ_G0031680)	2310057M21Rik (MGP_SPRETEiJ_G0031681) #34	Pstk (MGP_SPRETEiJ_G0031682) #35	Ikzf5 (MGP_SPRETEiJ_G0031683) #36	Acadsb (MGP_SPRETEiJ_G0031684) #37	Hmx3 (MGP_SPRETEiJ_G0031685)	Hmx2 (MGP_SPRETEiJ_G0031686)	Bub3 (MGP_SPRETEiJ_G0031687)	Gpr26 (MGP_SPRETEiJ_G0031688)	Cpxm2 (MGP_SPRETEiJ_G0031689)